Query 008927
Match_columns 548
No_of_seqs 337 out of 2633
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 14:55:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008927.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008927hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3azo_A Aminopeptidase; POP fam 100.0 1.9E-54 6.6E-59 480.2 49.7 456 68-546 3-475 (662)
2 2xe4_A Oligopeptidase B; hydro 100.0 4.1E-36 1.4E-40 337.6 38.1 404 89-546 117-561 (751)
3 2xdw_A Prolyl endopeptidase; a 100.0 6.8E-35 2.3E-39 326.3 42.7 420 83-546 69-518 (710)
4 4a5s_A Dipeptidyl peptidase 4 100.0 7.9E-35 2.7E-39 327.3 38.8 407 92-547 65-557 (740)
5 2bkl_A Prolyl endopeptidase; m 100.0 2.8E-34 9.6E-39 320.5 41.0 410 89-546 70-497 (695)
6 3iuj_A Prolyl endopeptidase; h 100.0 6.1E-34 2.1E-38 317.6 42.5 406 90-546 80-505 (693)
7 1yr2_A Prolyl oligopeptidase; 100.0 2.5E-33 8.5E-38 315.1 41.8 407 89-546 109-539 (741)
8 2ecf_A Dipeptidyl peptidase IV 100.0 4E-33 1.4E-37 312.8 40.8 424 76-546 20-574 (741)
9 3o4h_A Acylamino-acid-releasin 100.0 5.1E-34 1.8E-38 311.6 30.0 383 81-546 16-411 (582)
10 1xfd_A DIP, dipeptidyl aminope 100.0 6.5E-32 2.2E-36 302.0 36.0 412 90-547 62-551 (723)
11 2z3z_A Dipeptidyl aminopeptida 100.0 9E-31 3.1E-35 292.2 44.1 407 89-547 82-542 (706)
12 1z68_A Fibroblast activation p 100.0 6.9E-31 2.3E-35 293.9 34.4 402 90-547 61-551 (719)
13 4hvt_A Ritya.17583.B, post-pro 99.9 2.8E-23 9.5E-28 229.3 35.6 418 82-547 64-531 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 5.5E-22 1.9E-26 204.1 24.1 332 70-434 9-385 (388)
15 4a5s_A Dipeptidyl peptidase 4 99.9 2.3E-20 7.8E-25 209.5 30.2 318 77-435 3-402 (740)
16 2gop_A Trilobed protease; beta 99.8 1.4E-19 4.8E-24 183.2 25.4 306 76-451 3-342 (347)
17 3c5m_A Oligogalacturonate lyas 99.8 3.6E-20 1.2E-24 190.5 18.5 324 67-436 6-387 (396)
18 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.3E-18 1.1E-22 178.7 28.7 240 154-436 143-390 (415)
19 2hqs_A Protein TOLB; TOLB, PAL 99.8 5.2E-18 1.8E-22 177.2 29.6 256 99-404 143-401 (415)
20 1xfd_A DIP, dipeptidyl aminope 99.8 1.2E-17 4.2E-22 186.2 31.1 323 75-434 1-396 (723)
21 3pe7_A Oligogalacturonate lyas 99.8 8.3E-18 2.9E-22 172.7 26.3 287 115-439 11-335 (388)
22 1z68_A Fibroblast activation p 99.8 7.1E-18 2.4E-22 188.3 24.0 315 77-434 2-394 (719)
23 3c5m_A Oligogalacturonate lyas 99.7 1.3E-16 4.3E-21 163.9 21.8 253 147-438 40-334 (396)
24 2ecf_A Dipeptidyl peptidase IV 99.7 1.6E-15 5.4E-20 169.7 26.6 257 148-437 42-419 (741)
25 2z3z_A Dipeptidyl aminopeptida 99.7 2.6E-15 8.8E-20 167.1 26.8 255 149-439 88-397 (706)
26 2ojh_A Uncharacterized protein 99.7 9.2E-15 3.1E-19 142.7 27.0 232 148-419 47-292 (297)
27 1k32_A Tricorn protease; prote 99.7 4.1E-15 1.4E-19 173.1 25.6 305 89-436 53-464 (1045)
28 2ojh_A Uncharacterized protein 99.7 1.2E-14 3.9E-19 141.9 24.3 229 164-437 21-262 (297)
29 3azo_A Aminopeptidase; POP fam 99.7 5.1E-15 1.8E-19 163.4 23.8 251 150-438 29-330 (662)
30 3s25_A Hypothetical 7-bladed b 99.7 9.8E-15 3.3E-19 145.2 23.2 260 95-435 22-295 (302)
31 3s25_A Hypothetical 7-bladed b 99.7 1.7E-14 5.9E-19 143.4 24.3 235 147-437 18-259 (302)
32 2xdw_A Prolyl endopeptidase; a 99.7 5E-14 1.7E-18 157.2 30.8 259 151-435 80-370 (710)
33 2bkl_A Prolyl endopeptidase; m 99.6 2.3E-14 7.8E-19 159.5 26.9 257 150-435 75-353 (695)
34 2gop_A Trilobed protease; beta 99.6 6.5E-15 2.2E-19 148.7 17.6 248 90-398 60-338 (347)
35 1yr2_A Prolyl oligopeptidase; 99.6 1.2E-13 4.1E-18 154.9 28.8 260 150-436 114-398 (741)
36 1k32_A Tricorn protease; prote 99.6 2.4E-13 8.1E-18 158.3 28.7 268 89-418 204-491 (1045)
37 3o4h_A Acylamino-acid-releasin 99.6 6.6E-14 2.2E-18 152.3 20.4 233 148-431 27-274 (582)
38 3iuj_A Prolyl endopeptidase; h 99.5 9.5E-13 3.3E-17 146.4 26.9 285 74-398 113-413 (693)
39 2xe4_A Oligopeptidase B; hydro 99.5 1.1E-12 3.6E-17 147.2 27.3 249 151-431 123-398 (751)
40 3vgz_A Uncharacterized protein 99.5 2.1E-11 7.1E-16 122.7 31.8 282 89-419 41-334 (353)
41 3u4y_A Uncharacterized protein 99.5 3.3E-11 1.1E-15 120.3 28.0 242 148-435 45-306 (331)
42 3scy_A Hypothetical bacterial 99.5 5.5E-11 1.9E-15 120.7 29.8 276 89-397 50-346 (361)
43 1l0q_A Surface layer protein; 99.4 8E-11 2.7E-15 120.5 27.6 237 149-436 38-278 (391)
44 3vgz_A Uncharacterized protein 99.4 1.8E-09 6.2E-14 108.3 35.1 243 149-436 47-306 (353)
45 3hfq_A Uncharacterized protein 99.3 1E-10 3.4E-15 117.9 22.4 256 148-438 45-324 (347)
46 1pby_B Quinohemoprotein amine 99.3 3.2E-10 1.1E-14 112.8 23.5 246 148-436 39-313 (337)
47 1ri6_A Putative isomerase YBHE 99.3 6E-10 2.1E-14 111.1 24.8 259 148-437 43-314 (343)
48 3u4y_A Uncharacterized protein 99.3 1.9E-09 6.5E-14 107.4 28.0 243 150-438 5-257 (331)
49 1l0q_A Surface layer protein; 99.3 1.5E-09 5E-14 111.0 26.6 231 156-436 3-236 (391)
50 3bws_A Protein LP49; two-domai 99.2 3.5E-09 1.2E-13 109.7 27.3 291 89-432 123-431 (433)
51 1ri6_A Putative isomerase YBHE 99.2 3.1E-09 1E-13 105.9 25.9 266 90-396 39-316 (343)
52 3hfq_A Uncharacterized protein 99.2 9.1E-10 3.1E-14 110.9 21.8 226 89-341 86-326 (347)
53 3bws_A Protein LP49; two-domai 99.2 5E-09 1.7E-13 108.5 26.5 245 149-436 129-393 (433)
54 1pby_B Quinohemoprotein amine 99.2 2.9E-09 9.9E-14 105.8 23.0 232 157-436 3-272 (337)
55 1jmx_B Amine dehydrogenase; ox 99.1 6.3E-09 2.2E-13 104.0 23.3 159 154-340 10-181 (349)
56 1gxr_A ESG1, transducin-like e 99.1 3.1E-08 1.1E-12 98.2 26.5 237 149-436 58-299 (337)
57 1gxr_A ESG1, transducin-like e 99.1 7.5E-08 2.6E-12 95.3 28.0 265 89-415 52-323 (337)
58 3scy_A Hypothetical bacterial 99.1 2.4E-08 8.1E-13 101.1 23.7 168 149-341 161-346 (361)
59 4ao6_A Esterase; hydrolase, th 99.1 1E-10 3.6E-15 113.5 5.8 77 455-540 24-101 (259)
60 3zwl_B Eukaryotic translation 99.0 3.1E-07 1E-11 92.0 30.0 307 68-434 15-347 (369)
61 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.9E-07 6.6E-12 94.8 26.1 171 149-337 46-229 (365)
62 1jof_A Carboxy-CIS,CIS-muconat 98.9 1.1E-07 3.9E-12 96.5 22.0 219 193-436 42-295 (365)
63 2ghs_A AGR_C_1268P; regucalcin 98.9 2.8E-07 9.7E-12 92.2 23.2 226 147-420 53-293 (326)
64 3zwl_B Eukaryotic translation 98.9 1.9E-06 6.4E-11 86.2 29.0 229 149-418 39-279 (369)
65 4ery_A WD repeat-containing pr 98.9 3.2E-06 1.1E-10 83.3 30.0 268 89-415 24-296 (312)
66 3e5z_A Putative gluconolactona 98.9 4.7E-07 1.6E-11 88.8 23.7 236 147-436 32-289 (296)
67 1jmx_B Amine dehydrogenase; ox 98.9 2.4E-07 8.3E-12 92.3 22.0 120 148-281 48-174 (349)
68 3vl1_A 26S proteasome regulato 98.9 5.2E-06 1.8E-10 85.1 32.6 282 92-434 60-366 (420)
69 3g4e_A Regucalcin; six bladed 98.9 9.7E-07 3.3E-11 86.9 25.8 228 147-420 17-263 (297)
70 2ymu_A WD-40 repeat protein; u 98.9 7E-07 2.4E-11 96.0 26.8 213 149-414 351-565 (577)
71 2vdu_B TRNA (guanine-N(7)-)-me 98.9 3.7E-07 1.3E-11 95.4 23.9 252 149-436 109-396 (450)
72 3e5z_A Putative gluconolactona 98.8 4.2E-07 1.5E-11 89.1 22.5 251 89-394 28-290 (296)
73 1nir_A Nitrite reductase; hemo 98.8 2.4E-06 8.3E-11 91.8 28.7 250 149-436 228-517 (543)
74 2mad_H Methylamine dehydrogena 98.8 4E-06 1.4E-10 85.6 28.2 252 147-436 70-353 (373)
75 4gqb_B Methylosome protein 50; 98.8 3.6E-06 1.2E-10 84.8 27.0 239 149-434 89-332 (344)
76 2ymu_A WD-40 repeat protein; u 98.8 3.9E-06 1.3E-10 90.0 28.9 227 149-432 310-538 (577)
77 3g4e_A Regucalcin; six bladed 98.7 2.4E-06 8.3E-11 84.0 23.8 215 90-339 14-234 (297)
78 1npe_A Nidogen, entactin; glyc 98.7 4.3E-06 1.5E-10 80.7 24.8 232 156-436 3-241 (267)
79 3ow8_A WD repeat-containing pr 98.7 2.5E-06 8.6E-11 85.0 23.7 201 89-338 81-283 (321)
80 4g56_B MGC81050 protein; prote 98.7 1.9E-06 6.7E-11 87.2 23.2 292 88-433 42-343 (357)
81 3ei3_B DNA damage-binding prot 98.7 1.2E-05 4E-10 81.6 29.2 292 89-432 74-381 (383)
82 3ow8_A WD repeat-containing pr 98.7 4.7E-06 1.6E-10 82.9 25.4 226 150-430 88-318 (321)
83 2ghs_A AGR_C_1268P; regucalcin 98.7 3.2E-06 1.1E-10 84.5 24.1 222 80-340 39-266 (326)
84 2dg1_A DRP35, lactonase; beta 98.7 9.8E-06 3.4E-10 80.5 27.5 259 89-389 45-315 (333)
85 3dr2_A Exported gluconolactona 98.7 1.7E-06 5.9E-11 85.4 21.7 257 81-388 37-304 (305)
86 4ery_A WD repeat-containing pr 98.7 1.4E-05 4.7E-10 78.6 28.0 235 149-436 30-271 (312)
87 2dg1_A DRP35, lactonase; beta 98.7 4.7E-06 1.6E-10 82.9 24.6 248 149-432 51-315 (333)
88 3vl1_A 26S proteasome regulato 98.7 3.5E-06 1.2E-10 86.4 24.2 242 148-435 62-324 (420)
89 4e54_B DNA damage-binding prot 98.7 1.8E-06 6.3E-11 89.7 22.2 296 90-435 121-432 (435)
90 1nir_A Nitrite reductase; hemo 98.7 1E-05 3.5E-10 86.9 28.0 246 149-436 185-461 (543)
91 4aez_A CDC20, WD repeat-contai 98.7 3.1E-05 1E-09 79.3 30.4 238 150-436 99-339 (401)
92 3mkq_A Coatomer beta'-subunit; 98.6 2.7E-06 9.1E-11 95.5 24.1 238 149-435 20-261 (814)
93 2vdu_B TRNA (guanine-N(7)-)-me 98.6 3.6E-06 1.2E-10 87.9 23.2 269 73-394 87-397 (450)
94 1r5m_A SIR4-interacting protei 98.6 6.5E-06 2.2E-10 84.0 24.7 281 89-435 46-363 (425)
95 3i2n_A WD repeat-containing pr 98.6 8.3E-06 2.8E-10 81.2 24.7 296 88-434 18-354 (357)
96 4aez_A CDC20, WD repeat-contai 98.6 2.8E-05 9.6E-10 79.6 29.2 278 92-435 97-382 (401)
97 3c75_H MADH, methylamine dehyd 98.6 1.7E-05 5.8E-10 82.0 27.2 257 153-436 83-405 (426)
98 3dr2_A Exported gluconolactona 98.6 3.3E-06 1.1E-10 83.4 20.9 233 147-431 49-304 (305)
99 3mkq_A Coatomer beta'-subunit; 98.6 6.3E-06 2.1E-10 92.4 25.4 246 88-394 13-263 (814)
100 1yfq_A Cell cycle arrest prote 98.6 2.1E-05 7.1E-10 77.9 26.6 274 89-417 12-311 (342)
101 1npe_A Nidogen, entactin; glyc 98.6 1E-05 3.6E-10 78.0 23.6 200 149-394 42-242 (267)
102 4h5i_A Guanine nucleotide-exch 98.6 1.5E-06 5.1E-11 88.4 18.2 194 149-386 140-341 (365)
103 2aq5_A Coronin-1A; WD40 repeat 98.6 1.3E-05 4.5E-10 82.0 25.4 243 151-435 41-301 (402)
104 3sjl_D Methylamine dehydrogena 98.6 1E-05 3.4E-10 82.4 23.7 249 148-436 83-366 (386)
105 4a11_B DNA excision repair pro 98.6 4.7E-05 1.6E-09 77.1 28.8 292 89-435 44-367 (408)
106 2oiz_A Aromatic amine dehydrog 98.6 2.3E-05 7.9E-10 79.4 26.3 103 164-282 30-140 (361)
107 1r5m_A SIR4-interacting protei 98.6 1E-05 3.4E-10 82.5 23.6 241 90-392 110-363 (425)
108 3dsm_A Uncharacterized protein 98.6 2.1E-05 7.3E-10 78.5 25.3 235 150-435 49-303 (328)
109 4h5i_A Guanine nucleotide-exch 98.6 6.4E-06 2.2E-10 83.6 21.8 201 195-433 138-343 (365)
110 2mad_H Methylamine dehydrogena 98.6 0.00017 5.8E-09 73.4 32.3 229 166-436 48-310 (373)
111 2pm9_A Protein WEB1, protein t 98.5 3.5E-06 1.2E-10 86.2 19.8 251 149-436 19-297 (416)
112 1nr0_A Actin interacting prote 98.5 3.6E-05 1.2E-09 83.7 28.9 202 91-338 21-225 (611)
113 1nr0_A Actin interacting prote 98.5 2.2E-05 7.6E-10 85.4 26.1 237 149-435 25-272 (611)
114 3fm0_A Protein CIAO1; WDR39,SG 98.5 0.00012 4.2E-09 73.2 29.4 200 90-331 18-224 (345)
115 1sq9_A Antiviral protein SKI8; 98.5 0.00012 4E-09 74.1 29.5 205 149-393 69-325 (397)
116 3v65_B Low-density lipoprotein 98.5 5E-05 1.7E-09 77.8 26.3 231 155-435 88-320 (386)
117 3ei3_B DNA damage-binding prot 98.5 3.9E-05 1.3E-09 77.6 25.4 240 149-436 80-342 (383)
118 3v64_C Agrin; beta propeller, 98.5 9.9E-05 3.4E-09 74.4 28.1 231 155-435 45-277 (349)
119 1pgu_A Actin interacting prote 98.5 3.1E-05 1.1E-09 83.3 26.0 238 149-435 25-285 (615)
120 1erj_A Transcriptional repress 98.5 0.00013 4.5E-09 74.5 28.9 149 149-334 130-287 (393)
121 2ynn_A Coatomer subunit beta'; 98.5 6.2E-05 2.1E-09 73.9 25.4 238 149-436 20-262 (304)
122 1qks_A Cytochrome CD1 nitrite 98.4 0.00013 4.4E-09 78.6 28.8 245 148-434 202-478 (567)
123 3sfz_A APAF-1, apoptotic pepti 98.4 4.1E-06 1.4E-10 98.8 18.7 280 90-431 963-1247(1249)
124 3fm0_A Protein CIAO1; WDR39,SG 98.4 7.3E-05 2.5E-09 74.9 25.1 199 149-387 23-224 (345)
125 1got_B GT-beta; complex (GTP-b 98.4 0.00016 5.3E-09 72.3 27.3 264 89-413 56-327 (340)
126 1ijq_A LDL receptor, low-densi 98.4 0.00019 6.6E-09 71.2 27.7 230 156-435 3-240 (316)
127 2aq5_A Coronin-1A; WD40 repeat 98.4 2.8E-05 9.4E-10 79.6 21.9 242 149-437 88-346 (402)
128 3p5b_L Low density lipoprotein 98.4 0.00016 5.3E-09 74.5 27.5 233 156-435 85-322 (400)
129 2pm9_A Protein WEB1, protein t 98.4 1.1E-05 3.7E-10 82.5 18.2 253 89-392 68-339 (416)
130 1vyh_C Platelet-activating fac 98.4 0.00017 5.7E-09 74.2 27.1 240 149-435 115-371 (410)
131 1k8k_C P40, ARP2/3 complex 41 98.4 5.1E-05 1.8E-09 75.9 22.7 233 149-433 15-274 (372)
132 3nuz_A Putative acetyl xylan e 98.4 3.5E-07 1.2E-11 94.3 6.7 73 460-539 91-179 (398)
133 2b9v_A Alpha-amino acid ester 98.4 3.2E-07 1.1E-11 100.7 6.7 77 461-545 37-123 (652)
134 3i2n_A WD repeat-containing pr 98.4 0.00013 4.3E-09 72.5 25.3 210 89-331 66-290 (357)
135 1erj_A Transcriptional repress 98.4 0.00013 4.4E-09 74.5 25.9 200 193-436 126-344 (393)
136 3jrp_A Fusion protein of prote 98.4 0.00012 4.2E-09 73.2 25.2 248 89-388 12-287 (379)
137 2ynn_A Coatomer subunit beta'; 98.4 0.00035 1.2E-08 68.4 27.9 247 89-397 14-267 (304)
138 4gqb_B Methylosome protein 50; 98.3 3E-05 1E-09 78.0 20.5 243 90-387 84-330 (344)
139 3p5b_L Low density lipoprotein 98.3 9.2E-05 3.1E-09 76.2 24.2 201 149-391 118-321 (400)
140 1vlq_A Acetyl xylan esterase; 98.3 4.9E-07 1.7E-11 90.5 6.8 71 459-539 66-136 (337)
141 2xyi_A Probable histone-bindin 98.3 8.8E-05 3E-09 76.8 24.3 208 87-330 127-351 (430)
142 3v65_B Low-density lipoprotein 98.3 8.5E-05 2.9E-09 76.0 23.7 162 149-341 122-284 (386)
143 2pbi_B Guanine nucleotide-bind 98.3 0.00089 3E-08 67.2 30.7 268 87-414 63-342 (354)
144 1sq9_A Antiviral protein SKI8; 98.3 0.00013 4.3E-09 73.9 24.6 234 157-436 28-325 (397)
145 1vyh_C Platelet-activating fac 98.3 0.00056 1.9E-08 70.2 29.8 262 89-413 109-395 (410)
146 3sov_A LRP-6, low-density lipo 98.3 0.00018 6.3E-09 71.5 25.1 234 156-435 6-240 (318)
147 1pgu_A Actin interacting prote 98.3 0.00017 5.9E-09 77.4 26.9 201 192-436 20-241 (615)
148 3v64_C Agrin; beta propeller, 98.3 9.7E-05 3.3E-09 74.5 23.0 162 149-341 79-241 (349)
149 1qks_A Cytochrome CD1 nitrite 98.3 0.00049 1.7E-08 74.0 29.7 249 149-436 246-541 (567)
150 4g56_B MGC81050 protein; prote 98.3 2.6E-05 9E-10 78.7 18.5 192 149-387 146-342 (357)
151 1mpx_A Alpha-amino acid ester 98.3 6.3E-07 2.2E-11 97.8 6.7 76 461-544 25-109 (615)
152 1ijq_A LDL receptor, low-densi 98.3 0.00011 3.9E-09 72.9 22.6 202 149-392 36-240 (316)
153 3trd_A Alpha/beta hydrolase; c 98.3 1.5E-06 5.2E-11 80.2 7.7 69 460-537 5-76 (208)
154 3dwl_C Actin-related protein 2 98.3 6.5E-06 2.2E-10 83.1 13.1 156 149-330 18-175 (377)
155 3dsm_A Uncharacterized protein 98.3 0.00016 5.4E-09 72.0 23.1 210 150-396 91-308 (328)
156 1k8k_C P40, ARP2/3 complex 41 98.3 0.0001 3.5E-09 73.7 21.8 202 192-436 10-236 (372)
157 3sov_A LRP-6, low-density lipo 98.3 0.00012 4.2E-09 72.7 22.0 197 149-392 41-240 (318)
158 3sfz_A APAF-1, apoptotic pepti 98.2 0.00056 1.9E-08 80.5 31.3 202 89-338 658-875 (1249)
159 3ga7_A Acetyl esterase; phosph 98.2 1.8E-06 6.3E-11 86.1 8.1 68 462-539 64-133 (326)
160 3frx_A Guanine nucleotide-bind 98.2 0.0013 4.5E-08 64.8 28.9 203 89-338 18-231 (319)
161 3k26_A Polycomb protein EED; W 98.2 0.00066 2.3E-08 67.3 26.9 160 89-282 19-192 (366)
162 3jrp_A Fusion protein of prote 98.2 0.00016 5.5E-09 72.2 22.4 239 149-432 18-286 (379)
163 3sjl_D Methylamine dehydrogena 98.2 0.0002 6.8E-09 72.8 22.4 117 152-285 42-171 (386)
164 3dm0_A Maltose-binding peripla 98.2 0.00048 1.6E-08 75.9 27.0 192 149-393 437-635 (694)
165 3dw8_B Serine/threonine-protei 98.2 0.00035 1.2E-08 71.9 24.2 170 192-396 179-379 (447)
166 4gga_A P55CDC, cell division c 98.2 0.00081 2.8E-08 69.1 26.9 240 149-436 112-356 (420)
167 3m0c_C LDL receptor, low-densi 98.2 0.00055 1.9E-08 76.4 27.1 233 156-435 397-634 (791)
168 2hm7_A Carboxylesterase; alpha 98.2 3.1E-06 1.1E-10 83.7 8.0 72 460-539 47-120 (310)
169 2fuk_A XC6422 protein; A/B hyd 98.2 3.7E-06 1.3E-10 78.1 8.1 72 459-537 8-82 (220)
170 1yfq_A Cell cycle arrest prote 98.1 5.1E-05 1.7E-09 75.1 16.6 231 149-435 18-284 (342)
171 2jbw_A Dhpon-hydrolase, 2,6-di 98.1 3.1E-06 1.1E-10 86.6 7.8 68 459-537 125-192 (386)
172 1gkl_A Endo-1,4-beta-xylanase 98.1 4.1E-06 1.4E-10 82.6 8.3 80 459-544 39-127 (297)
173 2wir_A Pesta, alpha/beta hydro 98.1 3.1E-06 1E-10 83.8 7.0 72 458-538 48-121 (313)
174 2xyi_A Probable histone-bindin 98.1 0.00028 9.7E-09 72.9 22.3 201 149-390 135-353 (430)
175 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0017 5.9E-08 70.6 29.3 231 156-435 8-239 (628)
176 2ece_A 462AA long hypothetical 98.1 0.003 1E-07 65.0 29.1 156 152-319 93-272 (462)
177 1got_B GT-beta; complex (GTP-b 98.1 0.00064 2.2E-08 67.7 24.1 149 154-337 154-304 (340)
178 3hrp_A Uncharacterized protein 98.1 0.0011 3.9E-08 68.1 26.4 204 154-397 141-361 (409)
179 3g8y_A SUSD/RAGB-associated es 98.1 2.7E-06 9.2E-11 87.5 6.5 72 461-539 87-174 (391)
180 2oiz_A Aromatic amine dehydrog 98.1 0.0017 5.9E-08 65.5 27.1 130 200-338 13-144 (361)
181 3i2k_A Cocaine esterase; alpha 98.1 2.3E-06 7.9E-11 92.7 5.8 78 457-542 5-84 (587)
182 3frx_A Guanine nucleotide-bind 98.1 0.0012 3.9E-08 65.2 25.2 241 89-386 66-315 (319)
183 3iz6_a 40S ribosomal protein R 98.1 0.0026 8.8E-08 64.4 28.4 290 88-434 66-376 (380)
184 2pm7_B Protein transport prote 98.1 0.0033 1.1E-07 61.1 28.1 257 89-395 10-291 (297)
185 3m0c_C LDL receptor, low-densi 98.1 0.00032 1.1E-08 78.3 22.8 201 150-392 431-634 (791)
186 2xzm_R RACK1; ribosome, transl 98.1 0.0012 4.1E-08 65.7 25.1 201 89-337 77-288 (343)
187 3ain_A 303AA long hypothetical 98.1 8.3E-06 2.9E-10 81.4 9.0 70 460-538 64-135 (323)
188 3iii_A COCE/NOND family hydrol 98.1 5.4E-06 1.9E-10 89.0 8.0 79 457-543 37-136 (560)
189 3qh4_A Esterase LIPW; structur 98.1 6.9E-06 2.4E-10 81.7 8.3 71 460-539 59-131 (317)
190 1l7a_A Cephalosporin C deacety 98.1 4.7E-06 1.6E-10 81.8 6.8 71 460-541 55-126 (318)
191 3fcx_A FGH, esterase D, S-form 98.1 3.5E-06 1.2E-10 81.5 5.8 75 462-541 17-94 (282)
192 4aow_A Guanine nucleotide-bind 98.1 0.0028 9.7E-08 62.1 27.2 282 88-435 38-339 (340)
193 1jkm_A Brefeldin A esterase; s 98.0 3.5E-06 1.2E-10 85.5 5.9 71 461-538 82-155 (361)
194 3fcy_A Xylan esterase 1; alpha 98.0 6.2E-06 2.1E-10 82.8 7.5 70 460-540 81-150 (346)
195 3doh_A Esterase; alpha-beta hy 98.0 7.5E-06 2.6E-10 83.7 8.2 81 460-544 143-233 (380)
196 3ebl_A Gibberellin receptor GI 98.0 9.2E-06 3.1E-10 82.6 8.7 77 460-539 63-160 (365)
197 4e54_B DNA damage-binding prot 98.0 0.00032 1.1E-08 72.6 20.6 198 149-392 126-329 (435)
198 1n7d_A LDL receptor, low-densi 98.0 3.5E-05 1.2E-09 85.2 14.0 202 149-393 412-617 (699)
199 3f67_A Putative dienelactone h 98.0 6.3E-06 2.1E-10 77.5 6.7 70 461-540 6-75 (241)
200 3dw8_B Serine/threonine-protei 98.0 0.00014 4.8E-09 74.9 17.4 163 244-436 178-376 (447)
201 3lrv_A PRE-mRNA-splicing facto 98.0 0.00085 2.9E-08 66.8 22.5 155 149-332 132-292 (343)
202 2c7b_A Carboxylesterase, ESTE1 98.0 9.2E-06 3.1E-10 80.2 7.7 73 458-539 45-119 (311)
203 2pbi_B Guanine nucleotide-bind 98.0 0.0004 1.4E-08 69.8 19.9 193 89-328 155-353 (354)
204 4ggc_A P55CDC, cell division c 98.0 0.0045 1.5E-07 60.0 27.0 242 149-436 32-276 (318)
205 3hrp_A Uncharacterized protein 98.0 0.0017 5.7E-08 66.9 24.8 202 194-436 134-357 (409)
206 2hdw_A Hypothetical protein PA 98.0 9.4E-06 3.2E-10 81.8 7.6 68 460-535 67-135 (367)
207 4a11_B DNA excision repair pro 98.0 0.0031 1.1E-07 63.4 26.5 245 149-436 50-326 (408)
208 3dwl_C Actin-related protein 2 98.0 2.3E-05 8E-10 79.0 10.4 120 193-336 14-133 (377)
209 1lzl_A Heroin esterase; alpha/ 98.0 9.8E-06 3.3E-10 80.6 7.0 72 460-538 50-124 (323)
210 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0013 4.5E-08 71.6 24.2 196 149-392 43-239 (628)
211 3hxk_A Sugar hydrolase; alpha- 97.9 1.1E-05 3.6E-10 78.0 6.9 68 464-536 17-85 (276)
212 3k26_A Polycomb protein EED; W 97.9 0.0005 1.7E-08 68.3 19.4 153 154-336 33-194 (366)
213 2o2g_A Dienelactone hydrolase; 97.9 1.3E-05 4.3E-10 74.3 7.0 64 461-535 12-75 (223)
214 2ece_A 462AA long hypothetical 97.9 0.0012 4.3E-08 67.8 22.0 155 165-332 164-350 (462)
215 1mda_H Methylamine dehydrogena 97.9 0.0022 7.6E-08 64.9 23.8 97 155-262 32-141 (368)
216 3dm0_A Maltose-binding peripla 97.9 0.0011 3.7E-08 73.0 23.3 202 89-338 431-636 (694)
217 3iz6_a 40S ribosomal protein R 97.9 0.0019 6.5E-08 65.4 23.4 206 192-435 68-282 (380)
218 2pm7_B Protein transport prote 97.9 0.008 2.7E-07 58.3 27.1 201 149-388 16-238 (297)
219 3bjr_A Putative carboxylestera 97.9 7.8E-06 2.7E-10 79.4 5.1 77 458-538 16-94 (283)
220 3h2g_A Esterase; xanthomonas o 97.9 1.4E-05 4.8E-10 82.1 7.3 73 461-537 46-130 (397)
221 3v7d_B Cell division control p 97.9 0.013 4.6E-07 60.3 30.3 186 197-430 275-462 (464)
222 3f3f_A Nucleoporin SEH1; struc 97.9 0.0021 7.2E-08 62.7 22.9 203 89-330 12-247 (351)
223 2hes_X YDR267CP; beta-propelle 97.9 0.0045 1.5E-07 61.2 25.4 199 151-387 21-229 (330)
224 1zi8_A Carboxymethylenebutenol 97.9 5.2E-06 1.8E-10 77.8 3.5 65 462-537 4-68 (236)
225 2i3d_A AGR_C_3351P, hypothetic 97.9 2.2E-05 7.5E-10 74.7 7.9 67 460-536 20-91 (249)
226 3c75_H MADH, methylamine dehyd 97.9 0.0025 8.6E-08 65.7 23.4 128 199-338 81-213 (426)
227 1fwx_A Nitrous oxide reductase 97.9 0.0015 5.1E-08 69.5 21.8 167 153-335 100-309 (595)
228 3fak_A Esterase/lipase, ESTE5; 97.8 7.9E-06 2.7E-10 81.5 4.2 71 461-539 54-126 (322)
229 2j04_A TAU60, YPL007P, hypothe 97.8 0.00041 1.4E-08 73.7 17.4 190 149-387 92-296 (588)
230 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.0025 8.5E-08 62.0 22.2 237 155-433 29-299 (314)
231 1n7d_A LDL receptor, low-densi 97.8 0.00011 3.7E-09 81.3 13.5 210 89-340 406-620 (699)
232 3vu4_A KMHSV2; beta-propeller 97.8 0.001 3.4E-08 66.8 19.6 152 154-332 147-336 (355)
233 2qm0_A BES; alpha-beta structu 97.8 1.3E-05 4.5E-10 77.9 5.3 80 456-539 13-96 (275)
234 3bxp_A Putative lipase/esteras 97.8 2.2E-05 7.4E-10 75.8 6.8 69 462-534 5-75 (277)
235 4aow_A Guanine nucleotide-bind 97.8 0.01 3.5E-07 58.0 26.5 234 149-435 45-288 (340)
236 3lrv_A PRE-mRNA-splicing facto 97.8 0.0039 1.3E-07 61.9 23.6 189 164-394 103-298 (343)
237 4e15_A Kynurenine formamidase; 97.8 2.3E-05 7.7E-10 77.1 6.7 69 461-539 58-127 (303)
238 2wtm_A EST1E; hydrolase; 1.60A 97.8 3.1E-05 1.1E-09 73.7 7.3 65 464-536 4-68 (251)
239 2iwa_A Glutamine cyclotransfer 97.8 0.005 1.7E-07 59.2 22.7 198 194-433 24-237 (266)
240 3ls2_A S-formylglutathione hyd 97.8 2.5E-05 8.5E-10 75.6 6.6 69 461-533 15-84 (280)
241 1rwi_B Serine/threonine-protei 97.8 0.0072 2.5E-07 57.3 23.6 223 156-432 36-263 (270)
242 3jro_A Fusion protein of prote 97.8 0.00074 2.5E-08 75.3 18.9 157 149-335 16-190 (753)
243 3pfb_A Cinnamoyl esterase; alp 97.8 3.2E-05 1.1E-09 73.9 6.7 68 460-537 21-88 (270)
244 2o7r_A CXE carboxylesterase; a 97.7 2.6E-05 8.9E-10 78.0 6.1 73 461-539 55-131 (338)
245 4b6g_A Putative esterase; hydr 97.7 3.9E-05 1.3E-09 74.4 7.3 70 462-536 23-95 (283)
246 3no2_A Uncharacterized protein 97.7 0.016 5.6E-07 55.9 26.0 233 155-435 5-254 (276)
247 3h04_A Uncharacterized protein 97.7 9.6E-05 3.3E-09 70.1 9.8 69 462-539 4-74 (275)
248 4gga_A P55CDC, cell division c 97.7 0.0063 2.2E-07 62.3 24.1 237 149-434 154-396 (420)
249 1pjx_A Dfpase, DIISOPROPYLFLUO 97.7 0.0037 1.3E-07 60.7 21.2 204 155-390 83-299 (314)
250 3f3f_A Nucleoporin SEH1; struc 97.7 0.013 4.6E-07 56.8 25.3 205 149-387 18-248 (351)
251 2fp8_A Strictosidine synthase; 97.7 0.01 3.5E-07 58.4 24.2 236 155-433 30-313 (322)
252 3k2i_A Acyl-coenzyme A thioest 97.7 3.9E-05 1.3E-09 79.5 6.4 57 474-541 144-200 (422)
253 3hlk_A Acyl-coenzyme A thioest 97.7 4.3E-05 1.5E-09 79.8 6.5 57 474-541 160-216 (446)
254 2zsh_A Probable gibberellin re 97.7 7.9E-05 2.7E-09 75.0 8.2 75 462-539 73-161 (351)
255 3s94_A LRP-6, low-density lipo 97.6 0.01 3.6E-07 64.3 25.3 234 156-435 11-245 (619)
256 3jro_A Fusion protein of prote 97.6 0.0021 7.2E-08 71.6 20.1 205 89-335 10-239 (753)
257 4ezi_A Uncharacterized protein 97.6 8.5E-05 2.9E-09 75.7 7.9 72 461-539 43-125 (377)
258 3mmy_A MRNA export factor; mRN 97.6 0.0019 6.5E-08 63.9 17.8 105 88-210 39-149 (368)
259 2oaj_A Protein SNI1; WD40 repe 97.6 0.004 1.4E-07 70.9 22.4 203 149-394 24-246 (902)
260 3ksr_A Putative serine hydrola 97.6 4.5E-05 1.5E-09 73.9 5.4 66 461-540 6-71 (290)
261 2xzm_R RACK1; ribosome, transl 97.6 0.02 6.9E-07 56.6 25.2 195 192-435 78-287 (343)
262 3odt_A Protein DOA1; ubiquitin 97.6 0.011 3.7E-07 57.0 22.6 236 89-393 60-299 (313)
263 2p4o_A Hypothetical protein; p 97.6 0.0046 1.6E-07 60.6 20.0 203 89-339 32-246 (306)
264 3mmy_A MRNA export factor; mRN 97.6 0.0076 2.6E-07 59.4 21.8 110 149-282 46-160 (368)
265 3nok_A Glutaminyl cyclase; bet 97.6 0.0022 7.7E-08 61.2 16.7 156 151-341 61-217 (268)
266 3nol_A Glutamine cyclotransfer 97.6 0.012 4.1E-07 56.0 21.8 193 195-431 47-254 (262)
267 3nol_A Glutamine cyclotransfer 97.6 0.0047 1.6E-07 58.9 18.6 155 153-341 51-208 (262)
268 2uz0_A Esterase, tributyrin es 97.6 7.9E-05 2.7E-09 71.0 6.4 74 461-536 7-83 (263)
269 2iwa_A Glutamine cyclotransfer 97.6 0.0044 1.5E-07 59.5 18.6 200 92-334 24-237 (266)
270 3s94_A LRP-6, low-density lipo 97.6 0.013 4.5E-07 63.6 24.5 197 152-395 358-556 (619)
271 1jjf_A Xylanase Z, endo-1,4-be 97.6 0.00025 8.5E-09 68.1 9.8 73 460-536 31-112 (268)
272 2pbl_A Putative esterase/lipas 97.6 0.00012 4.2E-09 69.8 7.5 69 462-539 39-108 (262)
273 1rwi_B Serine/threonine-protei 97.6 0.013 4.3E-07 55.6 21.8 146 156-337 79-225 (270)
274 3d0k_A Putative poly(3-hydroxy 97.5 7.5E-05 2.6E-09 73.4 6.0 64 463-535 26-93 (304)
275 1sfr_A Antigen 85-A; alpha/bet 97.5 0.00014 4.9E-09 71.6 7.7 71 460-539 8-81 (304)
276 4ggc_A P55CDC, cell division c 97.5 0.023 7.8E-07 54.8 23.6 234 149-432 74-314 (318)
277 3mve_A FRSA, UPF0255 protein V 97.5 8.8E-05 3E-09 76.7 6.2 66 461-536 168-233 (415)
278 3hju_A Monoglyceride lipase; a 97.5 0.00015 5E-09 72.0 7.6 60 465-535 39-98 (342)
279 2oaj_A Protein SNI1; WD40 repe 97.5 0.0083 2.8E-07 68.3 22.9 198 193-435 20-244 (902)
280 3pe6_A Monoglyceride lipase; a 97.5 0.00017 5.8E-09 69.4 7.7 60 465-535 21-80 (303)
281 3i6y_A Esterase APC40077; lipa 97.5 0.00011 3.7E-09 71.0 6.2 70 461-534 17-87 (280)
282 1r88_A MPT51/MPB51 antigen; AL 97.5 0.0002 6.8E-09 69.7 8.0 68 460-538 10-80 (280)
283 2j04_A TAU60, YPL007P, hypothe 97.5 0.0026 8.9E-08 67.6 17.0 198 89-331 86-296 (588)
284 3bdi_A Uncharacterized protein 97.5 0.00035 1.2E-08 63.5 9.2 55 471-536 12-68 (207)
285 1qe3_A PNB esterase, para-nitr 97.5 2.6E-05 8.7E-10 82.5 1.6 62 471-540 81-145 (489)
286 3gre_A Serine/threonine-protei 97.5 0.013 4.4E-07 59.9 22.1 158 149-338 70-249 (437)
287 2z2n_A Virginiamycin B lyase; 97.5 0.051 1.7E-06 51.8 25.0 226 155-435 68-297 (299)
288 2qe8_A Uncharacterized protein 97.5 0.0057 2E-07 61.0 18.6 220 90-341 18-285 (343)
289 1q7f_A NHL, brain tumor CG1071 97.5 0.028 9.6E-07 53.8 23.0 154 154-340 88-244 (286)
290 3qqz_A Putative uncharacterize 97.4 0.046 1.6E-06 52.0 23.6 208 192-431 28-251 (255)
291 3v7d_B Cell division control p 97.4 0.017 5.7E-07 59.7 22.5 187 149-388 275-463 (464)
292 1jji_A Carboxylesterase; alpha 97.4 0.00017 5.7E-09 71.3 6.7 68 460-538 55-124 (311)
293 2p4o_A Hypothetical protein; p 97.4 0.048 1.6E-06 53.1 24.4 223 149-419 38-278 (306)
294 2h7c_A Liver carboxylesterase 97.4 7E-05 2.4E-09 80.2 3.8 64 468-540 95-161 (542)
295 3tc9_A Hypothetical hydrolase; 97.4 0.018 6.3E-07 59.4 22.1 152 154-333 149-300 (430)
296 1tht_A Thioesterase; 2.10A {Vi 97.4 0.00039 1.3E-08 68.6 8.9 68 460-535 6-73 (305)
297 1k8q_A Triacylglycerol lipase, 97.4 0.00053 1.8E-08 68.6 10.0 73 460-535 26-102 (377)
298 3e4d_A Esterase D; S-formylglu 97.4 0.00011 3.8E-09 70.7 4.6 70 461-535 15-85 (278)
299 3odt_A Protein DOA1; ubiquitin 97.4 0.003 1E-07 61.0 14.7 150 149-337 149-299 (313)
300 3mbr_X Glutamine cyclotransfer 97.3 0.052 1.8E-06 51.1 22.2 176 220-432 42-234 (243)
301 3fvz_A Peptidyl-glycine alpha- 97.3 0.065 2.2E-06 52.7 24.4 158 156-340 103-283 (329)
302 3qqz_A Putative uncharacterize 97.3 0.033 1.1E-06 53.1 21.0 213 83-333 21-252 (255)
303 3llc_A Putative hydrolase; str 97.3 0.00032 1.1E-08 66.4 6.6 67 462-537 12-79 (270)
304 4hw6_A Hypothetical protein, I 97.3 0.074 2.5E-06 54.9 24.7 152 154-333 152-303 (433)
305 3mbr_X Glutamine cyclotransfer 97.2 0.034 1.2E-06 52.4 19.7 158 151-341 27-186 (243)
306 3fvz_A Peptidyl-glycine alpha- 97.2 0.15 5.1E-06 50.1 25.6 147 165-338 69-231 (329)
307 3bg1_A Protein SEC13 homolog; 97.2 0.012 4.1E-07 57.7 17.4 136 149-312 20-162 (316)
308 2ha2_A ACHE, acetylcholinester 97.2 9.7E-05 3.3E-09 79.1 2.1 65 468-540 93-160 (543)
309 3d7r_A Esterase; alpha/beta fo 97.2 0.00021 7.3E-09 71.0 4.3 57 475-539 84-142 (326)
310 3vu4_A KMHSV2; beta-propeller 97.1 0.13 4.6E-06 51.0 24.7 150 150-335 106-272 (355)
311 4f0j_A Probable hydrolytic enz 97.1 0.0012 4E-08 63.9 8.9 66 460-535 19-84 (315)
312 3kya_A Putative phosphatase; s 97.1 0.068 2.3E-06 55.9 22.4 163 154-333 151-340 (496)
313 1imj_A CIB, CCG1-interacting f 97.1 0.00038 1.3E-08 63.6 4.8 56 471-535 15-72 (210)
314 2qc5_A Streptogramin B lactona 97.1 0.17 5.7E-06 48.1 24.0 222 155-432 73-299 (300)
315 1ukc_A ESTA, esterase; fungi, 97.1 0.00017 5.7E-09 76.8 2.5 66 468-540 82-150 (522)
316 2ogt_A Thermostable carboxyles 97.1 0.00015 5.1E-09 76.8 2.1 63 468-539 81-146 (498)
317 3d59_A Platelet-activating fac 97.1 0.00035 1.2E-08 71.2 4.6 58 472-537 81-138 (383)
318 3fnb_A Acylaminoacyl peptidase 97.1 0.00095 3.2E-08 68.5 7.9 65 460-536 134-199 (405)
319 3nok_A Glutaminyl cyclase; bet 97.0 0.031 1.1E-06 53.2 17.3 192 92-332 58-264 (268)
320 1mda_H Methylamine dehydrogena 97.0 0.014 4.8E-07 59.0 15.9 75 306-394 269-350 (368)
321 2fx5_A Lipase; alpha-beta hydr 97.0 0.00047 1.6E-08 65.8 4.8 59 477-541 34-92 (258)
322 4hvt_A Ritya.17583.B, post-pro 97.0 0.093 3.2E-06 57.7 23.6 289 73-397 110-436 (711)
323 3c8d_A Enterochelin esterase; 97.0 0.00031 1.1E-08 72.2 3.4 73 458-536 165-241 (403)
324 1vkh_A Putative serine hydrola 97.0 0.00032 1.1E-08 67.4 3.0 47 492-538 38-91 (273)
325 1p22_A F-BOX/WD-repeat protein 97.0 0.36 1.2E-05 49.2 26.5 227 149-434 138-366 (435)
326 1lns_A X-prolyl dipeptidyl ami 97.0 0.00083 2.8E-08 74.8 6.6 22 516-537 273-294 (763)
327 3bg1_A Protein SEC13 homolog; 96.9 0.0099 3.4E-07 58.3 13.8 247 89-395 14-299 (316)
328 1q7f_A NHL, brain tumor CG1071 96.9 0.059 2E-06 51.4 19.0 144 156-330 133-278 (286)
329 3das_A Putative oxidoreductase 96.9 0.03 1E-06 55.9 17.0 166 80-256 23-214 (347)
330 2fp8_A Strictosidine synthase; 96.9 0.04 1.4E-06 54.0 17.6 166 154-340 91-275 (322)
331 3k6k_A Esterase/lipase; alpha/ 96.9 0.00072 2.5E-08 67.0 4.7 47 493-539 78-126 (322)
332 1jfr_A Lipase; serine hydrolas 96.9 0.0013 4.3E-08 62.7 6.2 71 462-540 26-97 (262)
333 2hes_X YDR267CP; beta-propelle 96.8 0.13 4.5E-06 50.4 21.0 114 193-332 17-136 (330)
334 2ovr_B FBW7, F-BOX/WD repeat p 96.8 0.56 1.9E-05 47.8 29.7 227 150-432 205-441 (445)
335 2oit_A Nucleoporin 214KDA; NH2 96.8 0.019 6.5E-07 59.3 15.1 160 149-334 99-278 (434)
336 3no2_A Uncharacterized protein 96.8 0.13 4.4E-06 49.4 20.1 180 221-436 15-198 (276)
337 2z2n_A Virginiamycin B lyase; 96.8 0.38 1.3E-05 45.5 24.8 225 155-435 26-256 (299)
338 2qru_A Uncharacterized protein 96.7 0.0028 9.4E-08 61.1 7.8 58 471-538 13-72 (274)
339 1kb0_A Quinohemoprotein alcoho 96.7 0.88 3E-05 49.7 28.6 52 381-436 457-510 (677)
340 3qit_A CURM TE, polyketide syn 96.7 0.0045 1.5E-07 58.5 8.7 61 462-536 5-65 (286)
341 1ea5_A ACHE, acetylcholinester 96.6 0.00056 1.9E-08 73.0 2.2 62 468-538 91-155 (537)
342 3vis_A Esterase; alpha/beta-hy 96.6 0.001 3.5E-08 65.3 4.0 58 471-538 80-137 (306)
343 1dx4_A ACHE, acetylcholinester 96.6 0.00055 1.9E-08 73.9 1.9 48 492-539 138-188 (585)
344 1p0i_A Cholinesterase; serine 96.6 0.0006 2.1E-08 72.7 2.0 62 468-538 89-153 (529)
345 3tc9_A Hypothetical hydrolase; 96.5 0.11 3.6E-06 53.6 18.4 159 194-389 140-300 (430)
346 3gre_A Serine/threonine-protei 96.5 0.049 1.7E-06 55.5 15.7 153 155-337 182-362 (437)
347 2qe8_A Uncharacterized protein 96.5 0.13 4.3E-06 51.0 18.3 218 68-320 51-310 (343)
348 4gq1_A NUP37; propeller, trans 96.4 0.14 4.8E-06 51.7 18.4 73 192-282 138-218 (393)
349 3a9g_A Putative uncharacterize 96.4 0.067 2.3E-06 53.6 15.7 165 79-254 19-207 (354)
350 2gzs_A IROE protein; enterobac 96.4 0.00089 3E-08 65.0 1.5 72 457-535 9-82 (278)
351 2ovr_B FBW7, F-BOX/WD repeat p 96.4 1 3.6E-05 45.7 31.7 223 151-436 166-394 (445)
352 1kb0_A Quinohemoprotein alcoho 96.4 1 3.5E-05 49.1 26.1 80 325-419 457-540 (677)
353 2oit_A Nucleoporin 214KDA; NH2 96.4 0.036 1.2E-06 57.2 13.7 118 193-333 95-222 (434)
354 2bce_A Cholesterol esterase; h 96.3 0.00092 3.1E-08 71.9 1.5 68 466-539 75-151 (579)
355 3q7m_A Lipoprotein YFGL, BAMB; 96.3 0.98 3.3E-05 44.8 24.1 183 221-436 113-299 (376)
356 2vpj_A Kelch-like protein 12; 96.3 0.69 2.4E-05 44.4 22.1 243 165-438 31-283 (301)
357 1zoi_A Esterase; alpha/beta hy 96.3 0.0085 2.9E-07 57.2 7.9 57 466-535 4-60 (276)
358 1a88_A Chloroperoxidase L; hal 96.2 0.009 3.1E-07 56.8 7.9 57 466-535 3-59 (275)
359 3i28_A Epoxide hydrolase 2; ar 96.2 0.015 5.2E-07 61.2 10.4 64 457-535 233-296 (555)
360 1llf_A Lipase 3; candida cylin 96.2 0.003 1E-07 67.3 4.7 58 471-536 96-160 (534)
361 3hxj_A Pyrrolo-quinoline quino 96.2 0.43 1.5E-05 46.1 19.9 141 153-337 106-247 (330)
362 1fwx_A Nitrous oxide reductase 96.2 0.027 9.2E-07 59.9 11.5 147 165-334 175-361 (595)
363 4gq1_A NUP37; propeller, trans 96.1 0.043 1.5E-06 55.6 12.8 41 272-319 338-379 (393)
364 2qc5_A Streptogramin B lactona 96.1 0.93 3.2E-05 42.8 24.1 225 155-435 31-261 (300)
365 1thg_A Lipase; hydrolase(carbo 96.1 0.0039 1.3E-07 66.6 4.7 60 468-536 102-168 (544)
366 1dqz_A 85C, protein (antigen 8 96.1 0.0092 3.1E-07 57.5 7.0 68 461-539 6-76 (280)
367 2ad6_A Methanol dehydrogenase 96.0 2 6.9E-05 45.7 29.8 53 380-436 443-497 (571)
368 2ad6_A Methanol dehydrogenase 96.0 2.1 7.1E-05 45.6 25.8 56 324-394 443-498 (571)
369 2p9w_A MAL S 1 allergenic prot 96.0 0.88 3E-05 44.7 20.6 167 148-333 18-214 (334)
370 3sre_A PON1, serum paraoxonase 96.0 0.15 5.3E-06 50.9 15.5 121 156-292 128-262 (355)
371 2w18_A PALB2, fancn, partner a 95.9 0.2 6.7E-06 49.8 15.9 55 195-260 183-243 (356)
372 2fj0_A JuvenIle hormone estera 95.9 0.0026 8.8E-08 68.1 2.3 41 495-535 115-156 (551)
373 3q7m_A Lipoprotein YFGL, BAMB; 95.9 1.6 5.3E-05 43.3 26.4 227 150-436 99-340 (376)
374 4hw6_A Hypothetical protein, I 95.9 1 3.4E-05 46.3 21.7 158 194-389 142-303 (433)
375 1a8s_A Chloroperoxidase F; hal 95.8 0.017 5.8E-07 54.8 7.6 55 466-535 3-57 (273)
376 2e3j_A Epoxide hydrolase EPHB; 95.8 0.022 7.5E-07 56.8 8.6 55 471-535 11-65 (356)
377 1p22_A F-BOX/WD-repeat protein 95.7 1.8 6.3E-05 43.7 23.2 189 197-436 138-328 (435)
378 2r11_A Carboxylesterase NP; 26 95.7 0.03 1E-06 54.2 9.1 62 462-538 46-107 (306)
379 1ufo_A Hypothetical protein TT 95.7 0.0055 1.9E-07 56.5 3.5 58 465-536 6-63 (238)
380 2y6u_A Peroxisomal membrane pr 95.7 0.0041 1.4E-07 62.9 2.7 68 464-535 23-97 (398)
381 3hxj_A Pyrrolo-quinoline quino 95.6 1.1 3.8E-05 43.1 20.2 167 221-435 117-285 (330)
382 3vdx_A Designed 16NM tetrahedr 95.5 0.02 7E-07 59.5 7.1 57 464-535 6-62 (456)
383 3ia2_A Arylesterase; alpha-bet 95.4 0.028 9.4E-07 53.2 7.5 55 466-535 3-57 (271)
384 3bwx_A Alpha/beta hydrolase; Y 95.4 0.024 8.1E-07 54.3 7.0 63 460-535 4-66 (285)
385 1qlw_A Esterase; anisotropic r 95.4 0.01 3.4E-07 58.8 4.1 50 475-534 50-106 (328)
386 3r0v_A Alpha/beta hydrolase fo 95.3 0.029 9.8E-07 52.4 7.0 54 466-535 7-60 (262)
387 3sty_A Methylketone synthase 1 95.3 0.014 5E-07 54.7 4.9 40 494-535 11-50 (267)
388 1a8q_A Bromoperoxidase A1; hal 95.3 0.034 1.2E-06 52.6 7.5 55 466-535 3-57 (274)
389 2vat_A Acetyl-COA--deacetylcep 95.3 0.011 3.9E-07 61.1 4.3 41 495-535 109-153 (444)
390 3dkr_A Esterase D; alpha beta 95.2 0.014 4.9E-07 54.0 4.6 43 494-538 21-63 (251)
391 2j04_B YDR362CP, TAU91; beta p 95.2 0.51 1.7E-05 49.9 17.2 157 192-390 268-428 (524)
392 3pic_A CIP2; alpha/beta hydrol 95.2 0.012 4.1E-07 58.8 4.1 51 473-542 90-148 (375)
393 3kya_A Putative phosphatase; s 95.1 0.53 1.8E-05 49.1 16.5 120 195-333 143-277 (496)
394 4fbl_A LIPS lipolytic enzyme; 95.1 0.012 4.1E-07 56.7 3.8 61 471-535 29-89 (281)
395 3rm3_A MGLP, thermostable mono 95.1 0.017 5.7E-07 54.6 4.7 40 496-537 41-80 (270)
396 1q0r_A RDMC, aclacinomycin met 95.1 0.051 1.7E-06 52.4 8.2 53 471-535 9-62 (298)
397 2g8s_A Glucose/sorbosone dehyd 95.1 0.29 1E-05 48.8 14.1 29 302-332 324-352 (353)
398 4g9e_A AHL-lactonase, alpha/be 95.1 0.026 9E-07 53.0 6.0 40 495-536 24-63 (279)
399 2j04_B YDR362CP, TAU91; beta p 95.0 0.09 3.1E-06 55.7 10.3 143 157-333 279-427 (524)
400 1zgk_A Kelch-like ECH-associat 94.9 1.3 4.5E-05 42.7 18.1 239 165-437 39-291 (308)
401 4g4g_A 4-O-methyl-glucuronoyl 94.8 0.031 1.1E-06 56.5 5.8 58 464-544 114-181 (433)
402 1mtz_A Proline iminopeptidase; 94.7 0.048 1.6E-06 52.2 6.9 54 471-535 13-66 (293)
403 1c4x_A BPHD, protein (2-hydrox 94.7 0.048 1.7E-06 52.1 6.8 54 471-535 15-69 (285)
404 2wfl_A Polyneuridine-aldehyde 94.6 0.034 1.1E-06 52.8 5.4 39 495-535 10-48 (264)
405 3bix_A Neuroligin-1, neuroligi 94.6 0.019 6.7E-07 61.6 4.0 59 471-534 110-170 (574)
406 3cn9_A Carboxylesterase; alpha 94.5 0.023 7.9E-07 52.3 4.0 41 492-534 21-63 (226)
407 3ii7_A Kelch-like protein 7; p 94.5 3.4 0.00012 39.5 23.1 241 164-439 23-278 (306)
408 2yys_A Proline iminopeptidase- 94.5 0.044 1.5E-06 52.7 6.0 59 463-534 4-62 (286)
409 2rau_A Putative esterase; NP_3 94.4 0.03 1E-06 55.5 4.7 40 495-534 50-103 (354)
410 3g9x_A Haloalkane dehalogenase 94.4 0.065 2.2E-06 50.9 7.0 52 471-535 18-69 (299)
411 2cjp_A Epoxide hydrolase; HET: 94.3 0.1 3.5E-06 50.9 8.4 51 471-535 19-69 (328)
412 1auo_A Carboxylesterase; hydro 94.3 0.036 1.2E-06 50.3 4.7 41 492-534 11-53 (218)
413 3b5e_A MLL8374 protein; NP_108 94.3 0.018 6.2E-07 52.9 2.6 54 471-535 14-67 (223)
414 3u1t_A DMMA haloalkane dehalog 94.3 0.09 3.1E-06 50.1 7.6 51 471-535 17-67 (309)
415 1kv9_A Type II quinohemoprotei 94.2 7.7 0.00026 42.0 27.9 52 381-436 438-491 (668)
416 1brt_A Bromoperoxidase A2; hal 94.2 0.037 1.3E-06 52.7 4.6 37 497-535 25-61 (277)
417 3fob_A Bromoperoxidase; struct 94.1 0.038 1.3E-06 52.8 4.6 38 496-535 28-65 (281)
418 2xn4_A Kelch-like protein 2; s 94.0 4.3 0.00015 38.6 22.0 235 166-436 31-279 (302)
419 2pl5_A Homoserine O-acetyltran 94.0 0.043 1.5E-06 54.4 4.8 57 471-534 29-99 (366)
420 1hkh_A Gamma lactamase; hydrol 94.0 0.034 1.2E-06 52.9 3.9 37 497-535 25-61 (279)
421 1b6g_A Haloalkane dehalogenase 94.0 0.11 3.6E-06 50.7 7.6 52 473-535 34-85 (310)
422 4i19_A Epoxide hydrolase; stru 93.9 0.11 3.6E-06 52.9 7.7 54 471-534 76-138 (388)
423 2ocg_A Valacyclovir hydrolase; 93.9 0.04 1.4E-06 51.6 4.1 53 471-535 10-62 (254)
424 3guu_A Lipase A; protein struc 93.9 0.13 4.5E-06 53.2 8.3 72 460-537 74-168 (462)
425 4h0c_A Phospholipase/carboxyle 93.8 0.013 4.5E-07 54.0 0.5 49 492-543 19-68 (210)
426 3g02_A Epoxide hydrolase; alph 93.8 0.15 5.1E-06 52.2 8.5 55 471-535 93-153 (408)
427 3e0x_A Lipase-esterase related 93.8 0.042 1.4E-06 50.4 4.0 38 494-535 15-52 (245)
428 2b61_A Homoserine O-acetyltran 93.7 0.042 1.4E-06 54.7 4.2 40 495-534 59-108 (377)
429 1fj2_A Protein (acyl protein t 93.7 0.024 8.2E-07 52.1 2.2 40 492-533 20-59 (232)
430 3i1i_A Homoserine O-acetyltran 93.7 0.085 2.9E-06 52.2 6.4 63 464-534 15-95 (377)
431 3qvm_A OLEI00960; structural g 93.7 0.049 1.7E-06 51.1 4.4 38 496-536 29-66 (282)
432 4dnp_A DAD2; alpha/beta hydrol 93.7 0.041 1.4E-06 51.3 3.8 40 493-535 18-57 (269)
433 3r40_A Fluoroacetate dehalogen 93.6 0.15 5.3E-06 48.3 8.0 50 471-535 21-70 (306)
434 2xt0_A Haloalkane dehalogenase 93.6 0.14 4.8E-06 49.5 7.7 52 473-535 33-84 (297)
435 3qmv_A Thioesterase, REDJ; alp 93.6 0.021 7.3E-07 54.6 1.7 71 460-534 14-87 (280)
436 2ism_A Putative oxidoreductase 93.6 3 0.0001 41.3 17.6 84 236-335 23-115 (352)
437 1yiq_A Quinohemoprotein alcoho 93.6 10 0.00034 41.3 29.6 52 381-436 455-508 (689)
438 3nwo_A PIP, proline iminopepti 93.4 0.11 3.8E-06 51.0 6.7 56 471-535 36-93 (330)
439 3oos_A Alpha/beta hydrolase fa 93.2 0.15 5.2E-06 47.5 7.0 37 496-535 24-60 (278)
440 1wm1_A Proline iminopeptidase; 93.2 0.12 4.2E-06 49.9 6.4 60 462-535 15-74 (317)
441 3om8_A Probable hydrolase; str 93.1 0.22 7.6E-06 47.0 8.1 55 466-534 9-63 (266)
442 1cru_A Protein (soluble quinop 93.1 2.8 9.6E-05 43.2 17.0 103 156-261 39-160 (454)
443 2wue_A 2-hydroxy-6-OXO-6-pheny 93.1 0.15 5.1E-06 49.0 6.9 54 471-535 21-76 (291)
444 1azw_A Proline iminopeptidase; 93.0 0.13 4.6E-06 49.5 6.5 60 462-535 12-71 (313)
445 3kda_A CFTR inhibitory factor 92.9 0.26 9E-06 46.7 8.4 50 471-535 18-67 (301)
446 3og9_A Protein YAHD A copper i 92.8 0.054 1.8E-06 49.2 3.1 39 493-535 15-53 (209)
447 1flg_A Protein (quinoprotein e 92.8 12 0.00039 39.9 32.3 53 380-436 465-519 (582)
448 3a9g_A Putative uncharacterize 92.8 4.5 0.00015 40.0 17.5 167 149-331 35-228 (354)
449 4asc_A Kelch repeat and BTB do 92.8 7.1 0.00024 37.4 25.1 244 165-437 13-281 (315)
450 3kxp_A Alpha-(N-acetylaminomet 92.7 0.2 6.8E-06 48.3 7.1 50 471-535 56-105 (314)
451 3hss_A Putative bromoperoxidas 92.7 0.1 3.5E-06 49.6 4.9 39 495-535 43-82 (293)
452 1u2e_A 2-hydroxy-6-ketonona-2, 92.6 0.081 2.8E-06 50.6 4.2 39 496-535 37-77 (289)
453 1tqh_A Carboxylesterase precur 92.6 0.069 2.4E-06 50.0 3.5 39 496-536 17-55 (247)
454 1j1i_A META cleavage compound 92.3 0.19 6.6E-06 48.3 6.4 52 471-535 24-76 (296)
455 1ex9_A Lactonizing lipase; alp 92.1 0.13 4.3E-06 49.8 4.9 42 494-535 6-50 (285)
456 1iup_A META-cleavage product h 92.1 0.075 2.6E-06 50.9 3.2 52 471-535 13-65 (282)
457 3ibt_A 1H-3-hydroxy-4-oxoquino 91.9 0.21 7.3E-06 46.4 6.1 52 471-535 7-58 (264)
458 1r3d_A Conserved hypothetical 91.7 0.13 4.5E-06 48.5 4.4 39 495-535 16-54 (264)
459 2ism_A Putative oxidoreductase 91.5 5.3 0.00018 39.4 16.3 123 194-334 34-178 (352)
460 1xip_A Nucleoporin NUP159; bet 91.5 13 0.00043 37.4 20.9 145 153-336 96-257 (388)
461 2p9w_A MAL S 1 allergenic prot 91.3 4.5 0.00015 39.7 14.9 166 245-432 14-214 (334)
462 2xua_A PCAD, 3-oxoadipate ENOL 91.2 0.42 1.4E-05 44.9 7.4 54 471-535 10-63 (266)
463 3das_A Putative oxidoreductase 91.1 13 0.00043 36.7 28.7 160 156-331 44-232 (347)
464 1pja_A Palmitoyl-protein thioe 90.9 0.12 4.1E-06 49.6 3.2 40 494-535 35-76 (302)
465 2g8s_A Glucose/sorbosone dehyd 90.7 5.3 0.00018 39.5 15.3 88 236-335 10-108 (353)
466 3gff_A IROE-like serine hydrol 90.7 0.14 4.9E-06 50.7 3.5 67 460-532 11-83 (331)
467 2qvb_A Haloalkane dehalogenase 90.7 0.31 1.1E-05 45.9 5.9 50 471-535 16-65 (297)
468 2q0x_A Protein DUF1749, unchar 90.6 0.18 6.2E-06 49.8 4.3 46 494-540 37-84 (335)
469 4fhz_A Phospholipase/carboxyle 90.4 0.1 3.5E-06 50.5 2.1 63 471-542 48-116 (285)
470 1ys1_X Lipase; CIS peptide Leu 90.4 0.19 6.6E-06 49.4 4.2 43 494-536 7-53 (320)
471 2h1i_A Carboxylesterase; struc 90.3 0.19 6.4E-06 45.8 3.8 40 493-535 36-77 (226)
472 3afi_E Haloalkane dehalogenase 90.2 0.49 1.7E-05 46.0 7.0 52 471-535 15-66 (316)
473 2puj_A 2-hydroxy-6-OXO-6-pheny 90.2 0.15 5.2E-06 48.7 3.2 39 496-535 34-74 (286)
474 3sre_A PON1, serum paraoxonase 90.1 16 0.00053 36.2 24.4 195 194-417 53-284 (355)
475 1tca_A Lipase; hydrolase(carbo 90.1 0.28 9.4E-06 48.2 5.0 58 472-535 13-71 (317)
476 2qmq_A Protein NDRG2, protein 90.0 0.32 1.1E-05 46.0 5.4 55 471-534 19-77 (286)
477 2wj6_A 1H-3-hydroxy-4-oxoquina 89.9 0.49 1.7E-05 45.0 6.6 52 471-534 12-63 (276)
478 3l80_A Putative uncharacterize 89.8 0.21 7.1E-06 47.4 3.8 38 496-535 42-80 (292)
479 3fsg_A Alpha/beta superfamily 89.7 0.1 3.5E-06 48.6 1.4 38 496-535 22-60 (272)
480 3fla_A RIFR; alpha-beta hydrol 89.6 0.26 9E-06 45.8 4.3 39 493-534 18-56 (267)
481 2hz6_A Endoplasmic reticulum t 89.4 0.66 2.3E-05 46.4 7.4 134 221-393 19-152 (369)
482 3c5v_A PME-1, protein phosphat 89.3 0.32 1.1E-05 47.2 4.8 38 496-535 39-77 (316)
483 1w6s_A Methanol dehydrogenase 89.0 27 0.00091 37.2 28.5 80 325-419 453-536 (599)
484 4asc_A Kelch repeat and BTB do 89.0 16 0.00056 34.8 17.8 201 166-396 68-283 (315)
485 3b12_A Fluoroacetate dehalogen 88.4 0.082 2.8E-06 50.3 0.0 37 496-535 26-62 (304)
486 1cru_A Protein (soluble quinop 88.7 13 0.00043 38.2 16.7 88 236-334 19-123 (454)
487 1mj5_A 1,3,4,6-tetrachloro-1,4 88.6 0.56 1.9E-05 44.4 6.0 50 471-535 17-66 (302)
488 2r8b_A AGR_C_4453P, uncharacte 88.6 0.15 5.2E-06 47.5 1.8 42 493-537 60-103 (251)
489 2woz_A Kelch repeat and BTB do 88.5 17 0.0006 34.6 21.6 190 221-436 78-290 (318)
490 1w6s_A Methanol dehydrogenase 88.2 29 0.001 36.9 28.5 53 380-436 452-506 (599)
491 2xmz_A Hydrolase, alpha/beta h 87.4 0.45 1.5E-05 44.7 4.3 37 496-535 17-53 (269)
492 1ehy_A Protein (soluble epoxid 87.3 0.44 1.5E-05 45.6 4.3 50 471-535 17-66 (294)
493 3qyj_A ALR0039 protein; alpha/ 87.2 1.4 4.7E-05 42.2 7.8 50 471-535 13-62 (291)
494 3amr_A 3-phytase; beta-propell 87.2 24 0.00083 34.7 19.8 149 156-333 41-209 (355)
495 2zwa_A Leucine carboxyl methyl 87.1 13 0.00046 40.3 16.5 240 165-434 412-695 (695)
496 2vpj_A Kelch-like protein 12; 87.0 20 0.0007 33.7 21.8 211 152-397 60-285 (301)
497 4fol_A FGH, S-formylglutathion 86.9 0.74 2.5E-05 44.7 5.6 68 462-531 15-86 (299)
498 2xn4_A Kelch-like protein 2; s 86.1 23 0.00078 33.4 19.1 213 152-397 59-283 (302)
499 3zwu_A Alkaline phosphatase PH 85.8 2.6 8.9E-05 44.9 9.6 67 195-267 480-553 (592)
500 3v48_A Aminohydrolase, putativ 85.4 0.73 2.5E-05 43.3 4.7 37 495-534 15-51 (268)
No 1
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=1.9e-54 Score=480.18 Aligned_cols=456 Identities=29% Similarity=0.537 Sum_probs=375.2
Q ss_pred cccCCCCCCCcCCHHHHhcCCCccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCC
Q 008927 68 ITAPYGSWKSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG 147 (548)
Q Consensus 68 ~~~~~g~w~spit~~~l~~~~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg 147 (548)
+++|||+|++||+++++......+.+|+++ |+.++|++.++.++++..||.+..+ +..++||....++++.+++|++
T Consensus 3 ~~~~~g~w~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ 79 (662)
T 3azo_A 3 STAPYGAWQSPIDAALVASRSGRPACVGAV-GDEVWWVAPRPAEAGRATLVRRRAD--GAEESALPAPWNVRNRVFEYSG 79 (662)
T ss_dssp EECCTTCCCCSCCHHHHHHTCSCCEEEEEE-TTEEEEEEEETTTTTEEEEEEECTT--SCEEESSCTTCCBCCCGGGTCC
T ss_pred ccCCCcCCCCCCCHHHHhhcCCccceeEEc-CCeEEEEecCcccCCcEEEEEECCC--CCcceeCCCCccccccccccCC
Confidence 789999999999999999987899999999 8999999998888889999987444 5789999988899999999999
Q ss_pred eee--E--EECCE-EEEEeCCCCeEEEEeCC--CCCCCceecCCCCCC-CCceecceeeCCCCCEEEEEEeccCC-CCCC
Q 008927 148 GAF--R--IFGDT-VIFSNYKDQRLYKHSID--SKDSSPLPITPDYGE-PLVSYADGIFDPRFNRYVTVREDRRQ-DALN 218 (548)
Q Consensus 148 ~~~--~--~~~~~-i~F~~~~~~~Ly~~~~~--~~~~~~~~lT~~~~~-~~~~~~~~~~SpDG~~i~~v~~~~~~-~~~~ 218 (548)
+.+ + |||+. |+|+++++.+||+++++ +. +++++||..... ...++.++.|||||++|+|+++++.+ .+..
T Consensus 80 ~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~-~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 80 FPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGG-AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTC-CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred ccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCC-CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 875 3 67888 99999888899999987 20 467888873100 13467789999999999998766321 1112
Q ss_pred ceeEEEEEECCC------CCccCcEEee-ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE
Q 008927 219 STTEIVAIALNG------QNIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC 291 (548)
Q Consensus 219 ~~~~l~~idl~~------g~~~~~~~L~-~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~ 291 (548)
...+||++|+++ ++ .++|+ .+.+++..+.|||||++|+|.+++.+.++|+..+||+++++.+|.+.+.+.
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSA---VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGG---SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred ceeEEEEEECCCCccccCCc---eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 457999999999 77 78888 777778889999999999999988888899889999999984352222344
Q ss_pred EcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEE
Q 008927 292 VAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLI 371 (548)
Q Consensus 292 l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l 371 (548)
+.... . ..+..+.|+|||+|+|++++ .+..+||++++++++.+.++....+...|.|..+...+.+. +++.+
T Consensus 236 l~~~~-~--~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~----~~~~~ 307 (662)
T 3azo_A 236 LLGGP-E--EAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL----ANGLI 307 (662)
T ss_dssp EEEET-T--BCEEEEEECTTSCEEEEECT-TSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC----TTSCE
T ss_pred eCCCC-C--ceEcceEECCCCeEEEEECC-CCCeEEEEEECCCCceeecccccccccCccccccCceEeEe----CCCEE
Confidence 44321 1 45678999999998888887 78889999999889888888766666778998877778887 45678
Q ss_pred EEEEEeCCeEEEEEEECCCCceEeecCCCceeEee-eecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCCC
Q 008927 372 ACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPD 450 (548)
Q Consensus 372 ~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~~~-s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~~ 450 (548)
++.... +..+|+.+|+++++++.|+.+...+..+ +.+++.++++.++...+.+||++|+++++. +.|+..+.
T Consensus 308 ~~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~------~~l~~~~~ 380 (662)
T 3azo_A 308 AVVHGK-GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA------RTIGARHT 380 (662)
T ss_dssp EEEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE------EEEESCCC
T ss_pred EEEEEc-CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce------EEeecCCc
Confidence 888877 8999999999989888888766666777 889999999999988999999999988874 34445444
Q ss_pred CCccCCCccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEe
Q 008927 451 TLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV 530 (548)
Q Consensus 451 ~~l~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~ 530 (548)
..+....++.++.+++++. ||.+|++++|.|++.++.+++++++|+||++||||.......|....|+|+++||+|+.+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~-dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~ 459 (662)
T 3azo_A 381 DPVDPAYYPEPQIRTFTAP-DGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADV 459 (662)
T ss_dssp CSSCGGGSCCCEEEEEECT-TSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEE
T ss_pred ccCCccccCcceEEEEEcC-CCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEE
Confidence 5667778889999999997 999999999999764332334678999999999999888888999999999999999999
Q ss_pred CCCCCCCCChhhhhcc
Q 008927 531 NYGGSTGLSSVPSTSI 546 (548)
Q Consensus 531 NyRGStGyG~~f~~ai 546 (548)
|||||+|||+.|.+++
T Consensus 460 d~rG~~~~G~~~~~~~ 475 (662)
T 3azo_A 460 NYGGSTGYGRAYRERL 475 (662)
T ss_dssp ECTTCSSSCHHHHHTT
T ss_pred CCCCCCCccHHHHHhh
Confidence 9999999999998764
No 2
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=4.1e-36 Score=337.61 Aligned_cols=404 Identities=11% Similarity=0.033 Sum_probs=283.0
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCC---CCCCC-CcccCCCCCCccccceee---CCeeeE-EECCEEEEE
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPA---KAGDE-PSDITPKEYAVRTTAQEY---GGGAFR-IFGDTVIFS 160 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~---~~~~~-~~~lt~~~~~~r~~v~~y---gg~~~~-~~~~~i~F~ 160 (548)
..++-|... |+++||...... +.+..|++.+. ++ +. ..+++... |.++..++| +...|+ |||+.|+|+
T Consensus 117 ~~~~~p~~~-g~~~yy~~~~~g-~~~~vl~r~~~~~~~~-~~~~~~vlld~-n~~a~~~~~~~~~~~~~S~PDG~~lAy~ 192 (751)
T 2xe4_A 117 DDMSAPYVY-GKYRYYTREVKG-KPYKIYCRVFTDKEPG-DVAAEEVIIDV-NQVAEGKAFCDVMEVKPAPPEHDLVAFS 192 (751)
T ss_dssp SEECCCEEE-TTEEEEEEECTT-CCSCEEEEEETTSCTT-CTTTCEEEEEH-HHHTTTCSCCEEEEEEECTTTTCEEEEE
T ss_pred ccCCCCeEE-CCEEEEEEECCC-CceeEEEEEcCCCCCC-CCcCCEEEech-hHhccCCCeEEEeeeEecCCCCCEEEEE
Confidence 344555544 999999975421 22567887765 42 20 33333221 434444444 446789 899999999
Q ss_pred eCCCC----eEEEEeCCCCCC-CceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 161 NYKDQ----RLYKHSIDSKDS-SPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 161 ~~~~~----~Ly~~~~~~~~~-~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.+.++ +||++++++ + + .++... ...+.++.|||||+.|+|++.+.. ....+||++++.+++. +
T Consensus 193 ~~~~G~~~~~l~v~dl~~--g~~--~l~~~~---~~~~~~~~WspDg~~l~y~~~d~~----~~~~~v~~~~lgt~~~-~ 260 (751)
T 2xe4_A 193 VDMSGNEVYTIEFKRISD--PSQ--TIADKV---SGTNGEIVWGPDHTSLFYVTKDET----LRENKVWRHVMGKLQS-E 260 (751)
T ss_dssp EESSSSSCEEEEEEETTC--TTC--CCCCCE---EEECSCCEECSSTTEEEEEEECTT----CCEEEEEEEETTSCGG-G
T ss_pred EeCCCCceEEEEEEECCC--CCE--eCCccc---cCceeeEEEecCCCEEEEEEECCC----CCCCEEEEEECCCCch-h
Confidence 86543 599999997 5 4 222210 123567899999999999876532 1336899999988751 1
Q ss_pred cEEeeec--CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeee--EEEcCCCCCcccCCcCceECcC
Q 008927 236 PKVLVSG--SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR--VCVAGFDPTIVESPTEPKWSSK 311 (548)
Q Consensus 236 ~~~L~~~--~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~--~~l~~~~~~~~~~~~~~~wspD 311 (548)
.+++.++ ..++..+.|||||++|+|..+.. ..++||+++++. +.. +. +++.... ..+.|++|
T Consensus 261 ~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-----~~~~l~~~d~~~-~~~-~~~~~~l~~~~-------~~~~~s~~ 326 (751)
T 2xe4_A 261 DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-----ETAEVHLLDLRK-GNA-HNTLEIVRPRE-------KGVRYDVQ 326 (751)
T ss_dssp CEEEEECCCTTCEEEEEECTTSSEEEEEEECS-----SCEEEEEEESSS-CTT-CCCEEESSCCC-------TTCCEEEE
T ss_pred cEEEEecCCCceEEEEEECCCCCEEEEEecCC-----CCceEEEEECCC-CCC-CceeEEeecCC-------CCceEEEe
Confidence 2355433 34677899999999999988654 367999999984 310 13 4454422 23345555
Q ss_pred ---Cc-EEEEEeCC-CCeeeEEEEeccC-CeeEe-ecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEE
Q 008927 312 ---GE-LFFVTDRK-NGFWNLHKWIESN-NEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (548)
Q Consensus 312 ---G~-L~~~sd~~-~g~~~Ly~~d~~~-g~~~~-l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~ 384 (548)
|+ |||++++. .++++||++++++ ++.+. |++...+. ....+.+ .++.|++....++..+|+
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~-------~l~~~~~-----~~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDV-------FMESIAV-----RSNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSE-------EEEEEEE-----CSSEEEEEEEETTEEEEE
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCc-------EEEEEEE-----ECCEEEEEEEeCCEEEEE
Confidence 77 99999884 4788999999876 45555 55432111 1112334 567899999999999999
Q ss_pred EEEC-------CCCc-eEeecCCCce-eEee------eecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCC
Q 008927 385 ILDD-------FGHS-LSLLDIPFTD-IDNI------TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSP 449 (548)
Q Consensus 385 ~~dl-------~~g~-~~~l~~~~~~-~~~~------s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~ 449 (548)
++++ ++++ .+.|+.+... ...+ +.+++.++|..++.+.|+++|.+|+.+++.+ +|+...
T Consensus 395 ~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~------~l~~~~ 468 (751)
T 2xe4_A 395 TMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT------AVKVRE 468 (751)
T ss_dssp EEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE------EEEECC
T ss_pred EEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE------EEeccc
Confidence 9996 6777 7887654322 2233 3467889999999999999999999888743 344332
Q ss_pred CC-CccCCCccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEE
Q 008927 450 DT-LKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFV 528 (548)
Q Consensus 450 ~~-~l~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl 528 (548)
.. .++...+ .+|.++|++. ||.+|+++|++|++ +. +++++|+||++||||.....+.|+...|.|+++||+|+
T Consensus 469 ~~~~~~~~~~-~~~~~~~~s~-dG~~i~~~l~~p~~--~~--~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~ 542 (751)
T 2xe4_A 469 VGGGFDAANY-KVERRFATAP-DQTKIPLSVVYHKD--LD--MSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFA 542 (751)
T ss_dssp CCTTCCGGGE-EEEEEEEECT-TCCEEEEEEEEETT--SC--TTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEE
T ss_pred cccCCCccce-EEEEEEEECC-CCcEEEEEEEcCCC--CC--CCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEE
Confidence 21 3455555 4799999998 99999999999965 32 25688999999999999988899999999999999999
Q ss_pred EeCCCCCCCCChhhhh-cc
Q 008927 529 DVNYGGSTGLSSVPST-SI 546 (548)
Q Consensus 529 ~~NyRGStGyG~~f~~-ai 546 (548)
.+||||+++||++|.+ +.
T Consensus 543 ~~d~RG~g~~G~~~~~~~~ 561 (751)
T 2xe4_A 543 IAHIRGGSELGRAWYEIGA 561 (751)
T ss_dssp EECCTTSCTTCTHHHHTTS
T ss_pred EEeeCCCCCcCcchhhccc
Confidence 9999999999999987 54
No 3
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=6.8e-35 Score=326.32 Aligned_cols=420 Identities=12% Similarity=0.084 Sum_probs=291.9
Q ss_pred HHhcCCCccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCC-CCCccccceeeCCeeeEEECCEEEEEe
Q 008927 83 VVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPK-EYAVRTTAQEYGGGAFRIFGDTVIFSN 161 (548)
Q Consensus 83 ~l~~~~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~-~~~~r~~v~~ygg~~~~~~~~~i~F~~ 161 (548)
.+.+. ..+..|... |+++||+.... ...+..||+++..+ ++.+.|+.. ..... .-...++.+|+|||+.|+|..
T Consensus 69 ~~~~~-~~~~~p~~d-G~~~~~~~~~~-~~~~~~l~~~~~~~-~~~~~lld~~~l~~~-~~~~~~~~~~SPDg~~la~~~ 143 (710)
T 2xdw_A 69 ELYDY-PKYSCHFKK-GKRYFYFYNTG-LQNQRVLYVQDSLE-GEARVFLDPNILSDD-GTVALRGYAFSEDGEYFAYGL 143 (710)
T ss_dssp HHHCS-CEECCCEEE-TTEEEEEEECS-SCSSCEEEEESSTT-SCCEEEECGGGGCTT-SCEEEEEEEECTTSSEEEEEE
T ss_pred Hhhcc-ccCCCCEEE-CCEEEEEEEcC-CceEEEEEEEcCCC-CCcEEEECHHHhccC-CCEEEEEEEECCCCCEEEEEE
Confidence 34444 556677633 99999998642 12355899887653 455544421 11100 001234568999999999997
Q ss_pred CCCC----eEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC-------CCCceeEEEEEECCC
Q 008927 162 YKDQ----RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-------ALNSTTEIVAIALNG 230 (548)
Q Consensus 162 ~~~~----~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~-------~~~~~~~l~~idl~~ 230 (548)
+..+ +||++++++ ++..+++.. ...+..+.|||||+.|+|.+.+.... ......+||++++.+
T Consensus 144 ~~~G~~~~~i~v~d~~t--g~~~~~~~~----~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t 217 (710)
T 2xdw_A 144 SASGSDWVTIKFMKVDG--AKELPDVLE----RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGT 217 (710)
T ss_dssp EETTCSCEEEEEEETTT--TEEEEEEEE----EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTS
T ss_pred cCCCCceEEEEEEECCC--CCCCccccc----CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCC
Confidence 6543 899999998 777665432 23466789999999999986543210 001246799999988
Q ss_pred CCccCcEEeeec---CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCC-----CceeeeEEEcCCCCCcccC
Q 008927 231 QNIQEPKVLVSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN-----GDVYKRVCVAGFDPTIVES 302 (548)
Q Consensus 231 g~~~~~~~L~~~---~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~-----g~~~~~~~l~~~~~~~~~~ 302 (548)
++. +.+.+.++ ..+...+.|||||++|++......+ ...+||+++++.. +.. ..+.+.... ..
T Consensus 218 ~~~-~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~----~~ 288 (710)
T 2xdw_A 218 DQS-EDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQQESNGITGIL-KWVKLIDNF----EG 288 (710)
T ss_dssp CGG-GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGGGSSSSSCSSC-CCEEEECSS----SS
T ss_pred Ccc-cceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECcccccccCCcc-ceEEeeCCC----Cc
Confidence 751 12345443 2346688999999999988753321 1578999999741 321 234444432 22
Q ss_pred CcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCe---eEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC
Q 008927 303 PTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNE---VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (548)
Q Consensus 303 ~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~---~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~ 378 (548)
. ...|+|||+ |+|.++.+.....|+++++++++ .+.|++...+ .. ...+.+. +++.|++.+..+
T Consensus 289 ~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~----~~---~~~~~~~----~~~~lv~~~~~~ 356 (710)
T 2xdw_A 289 E-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK----DV---LEWVACV----RSNFLVLCYLHD 356 (710)
T ss_dssp C-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS----CE---EEEEEEE----TTTEEEEEEEET
T ss_pred E-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC----Ce---EEEEEEE----cCCEEEEEEEEC
Confidence 2 346899999 99988874457889999998774 3566543110 01 1123454 578899999999
Q ss_pred CeEEEEEEECCCCc-eEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc--eeeeeeEEEecCCCCCCc
Q 008927 379 GRSYLGILDDFGHS-LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK--LKAVDFKVVWSSSPDTLK 453 (548)
Q Consensus 379 g~~~L~~~dl~~g~-~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~--~~~~~~~~~l~~~~~~~l 453 (548)
+..+|+++++.+|+ .+.|..+...+..+ +++++.++|..++.++|..||++|+.+++ .+ +|.......+
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~------~l~~~~~~~~ 430 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPR------VFREVTVKGI 430 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCE------EEEECCCTTC
T ss_pred CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceE------EeeecccCCc
Confidence 99999999996665 56777664445544 56788999999999999999999998876 43 3333222224
Q ss_pred cCCCccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHh-cCcEEEEeCC
Q 008927 454 YKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNY 532 (548)
Q Consensus 454 ~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~as-rGyaVl~~Ny 532 (548)
+...+ .+|.++|++. ||.+|+++++.|++ +. .++++|+||++||||.....+.|+...+.|++ +||+|+.+|+
T Consensus 431 ~~~~~-~~~~~~~~~~-dg~~i~~~~~~p~~--~~--~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~ 504 (710)
T 2xdw_A 431 DASDY-QTVQIFYPSK-DGTKIPMFIVHKKG--IK--LDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANI 504 (710)
T ss_dssp CGGGE-EEEEEEEECT-TSCEEEEEEEEETT--CC--CSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECC
T ss_pred Ccccc-EEEEEEEEcC-CCCEEEEEEEecCC--CC--CCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEcc
Confidence 44444 5789999998 99999999999975 32 25678999999999999888899988889999 9999999999
Q ss_pred CCCCCCChhhhhcc
Q 008927 533 GGSTGLSSVPSTSI 546 (548)
Q Consensus 533 RGStGyG~~f~~ai 546 (548)
||+.+||++|.++.
T Consensus 505 rG~g~~g~~~~~~~ 518 (710)
T 2xdw_A 505 RGGGEYGETWHKGG 518 (710)
T ss_dssp TTSSTTHHHHHHTT
T ss_pred CCCCCCChHHHHhh
Confidence 99999999998764
No 4
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=7.9e-35 Score=327.29 Aligned_cols=407 Identities=10% Similarity=0.058 Sum_probs=279.4
Q ss_pred CceEEcC-CCcEEEEEecCC---CCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 92 GGTAVDG-HGRLIWLESRPT---EAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 92 ~~~~~sp-g~~i~~~~~~~~---e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
.++.+|| |+.|++...... ..+...++.++..+ ++.++|+.....+. ..+|+|||++|+|.. +++|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~-~~~~~l~~~~~~~~-------~~~~SPdG~~la~~~--~~~i 134 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK-RQLITEERIPNNTQ-------WVTWSPVGHKLAYVW--NNDI 134 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TEECCSSCCCTTEE-------EEEECSSTTCEEEEE--TTEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC-CcEEEcccCCCcce-------eeEECCCCCEEEEEE--CCeE
Confidence 4589999 999988764210 12235666776653 46777775332221 257999999999997 5789
Q ss_pred EEEeCCCCCCCceecCCCCCCCC---------------ceecceeeCCCCCEEEEEEeccCC------------------
Q 008927 168 YKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQ------------------ 214 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~~~~~~~---------------~~~~~~~~SpDG~~i~~v~~~~~~------------------ 214 (548)
|++++++ ++.++||....... .+...+.|||||+.|+|.+.+...
T Consensus 135 ~~~~~~~--~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~ 212 (740)
T 4a5s_A 135 YVKIEPN--LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPK 212 (740)
T ss_dssp EEESSTT--SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCE
T ss_pred EEEECCC--CceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCc
Confidence 9999988 78899987521000 011247899999999998654320
Q ss_pred ---------CCCCceeEEEEEECCC---C---CccCcEEeee------cCCceeeeEECCCCCEEEEEEecCCCCCCCCc
Q 008927 215 ---------DALNSTTEIVAIALNG---Q---NIQEPKVLVS------GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKA 273 (548)
Q Consensus 215 ---------~~~~~~~~l~~idl~~---g---~~~~~~~L~~------~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~ 273 (548)
+..+....|+++|+++ + + .+.|.. ...+...+.|||||+.+++...+.. ...
T Consensus 213 ~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~----~~~ 285 (740)
T 4a5s_A 213 TVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT---SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ----NYS 285 (740)
T ss_dssp EEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC---EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST----TEE
T ss_pred ceeecCCCCcCcCCeeEEEEEECCCCCCCCcce---EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC----CEE
Confidence 0012344799999999 7 4 555653 3334678999999998877664432 245
Q ss_pred eEEEEEecCCCc----eee-eEEEcCCCCCcccC-----CcCceECcCCc-EE-EEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 274 ELWVGYISENGD----VYK-RVCVAGFDPTIVES-----PTEPKWSSKGE-LF-FVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 274 ~L~v~~~~~~g~----~~~-~~~l~~~~~~~~~~-----~~~~~wspDG~-L~-~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
.|++.|+++ |+ ... ..++.... . .. ...|.|||||+ |+ +.+++ +|+.+||++++++++.++|+
T Consensus 286 ~i~~~d~~t-g~~~~~~~~~~~l~~~~~-~--~~v~~~~~~~p~fspDG~~l~~~~s~~-~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 286 VMDICDYDE-SSGRWNCLVARQHIEMST-T--GWVGRFRPSEPHFTLDGNSFYKIISNE-EGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp EEEEEEEET-TTTEEEECGGGCEEEECS-S--SCSSSSSCCCCEECTTSSEEEEEEECT-TSCEEEEEEETTCSSCEESC
T ss_pred EEEEEECCC-CccccceeEEEEeeeccC-C--ceEccCcCCCceEcCCCCEEEEEEEcC-CCceEEEEEECCCCceEecc
Confidence 799999985 43 101 11211111 1 22 24799999999 77 67787 89999999999999989998
Q ss_pred ccccccCCCcccccCcceeeeeecCCCCEEEEEEEe----CCeEEEEEEECCCCceE-eecCCC----ceeE--eeeecC
Q 008927 342 SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ----NGRSYLGILDDFGHSLS-LLDIPF----TDID--NITLGN 410 (548)
Q Consensus 342 ~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~----~g~~~L~~~dl~~g~~~-~l~~~~----~~~~--~~s~d~ 410 (548)
....+...+ +.+ |++.|||.+.. .+..+||++++++++.+ .|+... ..+. .+++++
T Consensus 361 ~g~~~v~~~--------~~~-----d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg 427 (740)
T 4a5s_A 361 KGTWEVIGI--------EAL-----TSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEA 427 (740)
T ss_dssp CSSSCEEEE--------EEE-----CSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTS
T ss_pred cCCEEEEEE--------EEE-----eCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCC
Confidence 542221110 112 68899999876 46789999999877654 676331 2222 347899
Q ss_pred CEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCC--CCCccCCCccCCeEEEeeccCCCeEEEEEEEcCCCCCCC
Q 008927 411 DCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSP--DTLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQ 488 (548)
Q Consensus 411 ~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~--~~~l~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~ 488 (548)
+.+++..+++. ++.+++++.++++.. +++.... ...+....+..++.+++ +. ||.+++++++.|.+ |+
T Consensus 428 ~~~~~~~s~~~-~p~~~l~~~~~~~~~-----~~l~~n~~~~~~~~~~~~~~~~~~~~-~~-dg~~l~~~~~~P~~--~~ 497 (740)
T 4a5s_A 428 KYYQLRCSGPG-LPLYTLHSSVNDKGL-----RVLEDNSALDKMLQNVQMPSKKLDFI-IL-NETKFWYQMILPPH--FD 497 (740)
T ss_dssp SEEEEEECSBS-SCEEEEEETTTTEEE-----EEEECCHHHHHHHTTEECCEEEEEEE-EE-TTEEEEEEEEECTT--CC
T ss_pred CEEEEEeCCCC-CCEEEEEECCCCcEE-----EEeccChhhhhhhhhccCCccEEEEE-cc-CCeEEEEEEEeCCC--CC
Confidence 99988888876 889999998777642 2332210 12234455677788888 66 99999999999965 54
Q ss_pred CCCCCCCcEEEEEccCccccc-cCccC-hHHHHHH-hcCcEEEEeCCCCCCCCChhhhhccc
Q 008927 489 ASPEEKPPLLVKSHGGPTSEA-RGILN-LSIQYWT-SRGWAFVDVNYGGSTGLSSVPSTSIF 547 (548)
Q Consensus 489 ~~~~~~~Pliv~iHGGP~~~~-~~~~~-~~~Q~~a-srGyaVl~~NyRGStGyG~~f~~ai~ 547 (548)
+++++|+||++||||.++. ...|. ...++++ ++||+|+.+|+||+.++|++|.++++
T Consensus 498 --~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~ 557 (740)
T 4a5s_A 498 --KSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAIN 557 (740)
T ss_dssp --TTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGT
T ss_pred --CCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHH
Confidence 3678999999999999864 33443 2335555 59999999999999999999988765
No 5
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=2.8e-34 Score=320.55 Aligned_cols=410 Identities=13% Similarity=0.110 Sum_probs=287.1
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCC-CCccccceeeCCeeeEEECCEEEEEeCCC---
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YAVRTTAQEYGGGAFRIFGDTVIFSNYKD--- 164 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~-~~~r~~v~~ygg~~~~~~~~~i~F~~~~~--- 164 (548)
..+..|... |+++||+..... +.+..||+++..+ ++.+.|+... +..... ...++.+|+|||+.|+|+.+..
T Consensus 70 ~~~~~p~~d-G~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~l~d~~~~a~~~~-~~~~~~~~SPDG~~la~~~~~~G~~ 145 (695)
T 2bkl_A 70 DSVSTPSRR-NGRFFYVRTHKD-KEKAILYWRQGES-GQEKVLLDPNGWSKDGT-VSLGTWAVSWDGKKVAFAQKPNAAD 145 (695)
T ss_dssp CEECCCEEE-TTEEEEEEECTT-CSSCEEEEEESTT-SCCEEEECGGGSSSSSC-EEEEEEEECTTSSEEEEEEEETTCS
T ss_pred ccCCCCEEE-CCEEEEEEEcCC-CeEEEEEEEcCCC-CCcEEEEchHHhccCCC-EEEEEEEECCCCCEEEEEECCCCCc
Confidence 455566644 999999986532 2367889887653 4677777421 111111 1234568999999999997543
Q ss_pred -CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC----CCCceeEEEEEECCCCCccCcEEe
Q 008927 165 -QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD----ALNSTTEIVAIALNGQNIQEPKVL 239 (548)
Q Consensus 165 -~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~----~~~~~~~l~~idl~~g~~~~~~~L 239 (548)
..||++++++ ++..+.+.. ....+..+.|||||+.|+|++.+.... ......+||++++.+++.. .+++
T Consensus 146 ~~~i~v~dl~t--g~~~~~~~~---~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-~~lv 219 (695)
T 2bkl_A 146 EAVLHVIDVDS--GEWSKVDVI---EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-DTVV 219 (695)
T ss_dssp CCEEEEEETTT--CCBCSSCCB---SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-CEEE
T ss_pred eEEEEEEECCC--CCCcCCccc---CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-ceEE
Confidence 4899999998 655411111 112346789999999999986543210 0013468999999988611 2355
Q ss_pred eecC---CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEE
Q 008927 240 VSGS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 316 (548)
Q Consensus 240 ~~~~---~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~ 316 (548)
.... .++..+.|||||++|++.+.+.. ...+||+++.. +++ .+.+.... .....+.| +||+||+
T Consensus 220 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~-~~~---~~~l~~~~----~~~~~~~~-~~g~l~~ 286 (695)
T 2bkl_A 220 HERTGDPTTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPG-EKD---FRLLVKGV----GAKYEVHA-WKDRFYV 286 (695)
T ss_dssp ECCCCCTTCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTT-CSS---CEEEEECS----SCCEEEEE-ETTEEEE
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCC-CCc---eEEeecCC----CceEEEEe-cCCcEEE
Confidence 4432 35678999999999998876542 24689999765 343 33344322 33455667 6777777
Q ss_pred EEeCCCCeeeEEEEeccCCee---EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 317 VTDRKNGFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 317 ~sd~~~g~~~Ly~~d~~~g~~---~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
.++.+.+...|+++++++++. +.|++... .+.. ..+.+ .++.|+++...++..+|++++++++..
T Consensus 287 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~~l--~~~~~-----~~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAKPARASWKEIVPEDS-----SASL--LSVSI-----VGGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp EECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-----SCEE--EEEEE-----ETTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred EECCCCCCCEEEEEeCCCCCccCCeEEecCCC-----CCeE--EEEEE-----ECCEEEEEEEECCEEEEEEEeCCCCee
Confidence 777645678999999987763 56654211 1111 12344 356788899999999999999876666
Q ss_pred EeecCC-CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCCCCCccCCCccCCeEEEeeccC
Q 008927 394 SLLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEV 470 (548)
Q Consensus 394 ~~l~~~-~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~pe~i~~~s~~ 470 (548)
+.|..+ ...+..+ +++++.+++..++...|..||++|+++++.+ +|+... ..++... ..+|.++|++.
T Consensus 355 ~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~------~l~~~~-~~~~~~~-~~~~~~~~~~~- 425 (695)
T 2bkl_A 355 RTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE------LWAKVD-VPMNPEQ-YQVEQVFYASK- 425 (695)
T ss_dssp EECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE------EEEECC-CSSCGGG-EEEEEEEEECT-
T ss_pred EEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE------EEecCC-CCCCHHH-CeEEEEEEECC-
Confidence 777654 3334444 5688899999999999999999999888743 344332 2244433 36899999998
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChhhhhcc
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSVPSTSI 546 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai 546 (548)
||.+|+++++.|++ ++ .++++|+||++||||.....+.|+...+.|+++||+|+.+|+||+.+||++|.++.
T Consensus 426 dg~~i~~~~~~p~~--~~--~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~ 497 (695)
T 2bkl_A 426 DGTKVPMFVVHRKD--LK--RDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAG 497 (695)
T ss_dssp TSCEEEEEEEEETT--CC--CSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred CCCEEEEEEEECCC--CC--CCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhh
Confidence 99999999999975 33 25678999999999999988899999999999999999999999999999998764
No 6
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=6.1e-34 Score=317.61 Aligned_cols=406 Identities=11% Similarity=0.132 Sum_probs=287.3
Q ss_pred ccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccC-CCCCCccccceeeCCeeeEEECCEEEEEeCCC----
Q 008927 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDIT-PKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD---- 164 (548)
Q Consensus 90 ~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt-~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~---- 164 (548)
.+.-|... |++.||...... +.+..+|+...+ ++.+-|+ +..+... .-...++.+|+|||++|+|+.+..
T Consensus 80 ~~~~p~~~-g~~~y~~~~~~~-~~~~~~~r~~~~--~~~~vllD~n~la~~-~~~~l~~~~~SpDg~~lAy~~~~~G~~~ 154 (693)
T 3iuj_A 80 KEGAPFRE-GRYHYFFKNDGL-QNQNVLWRQQEG--KPAEVFLDPNTLSPD-GTTALDQLSFSRDGRILAYSLSLAGSDW 154 (693)
T ss_dssp EECCCEEE-TTEEEEEEECSS-CSSCEEEEECTT--SCCEEEECGGGGSTT-SCCEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred cCCCCEEE-CCEEEEEEEcCC-CceeEEEEeCCC--CCcEEEEehhhccCC-CcEEEEEEEECCCCCEEEEEEecCCCce
Confidence 34444444 999999875432 345578876554 2333333 2222111 111234567899999999987654
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC----CCCceeEEEEEECCCCCccCcEEee
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD----ALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~----~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
..||++|+++ ++..+.+.. ..++..+.|| ||+.|+|++.+..+. ......+||++++.++.. +.++|.
T Consensus 155 ~~i~v~dl~t--g~~~~~~~~----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~-~~~~v~ 226 (693)
T 3iuj_A 155 REIHLMDVES--KQPLETPLK----DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQE-DDRLVF 226 (693)
T ss_dssp EEEEEEETTT--CSEEEEEEE----EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGG-GCEEEE
T ss_pred EEEEEEECCC--CCCCccccC----CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcc-cceEEE
Confidence 3799999998 776555432 2346788999 999999987553100 012346899999988651 135666
Q ss_pred ecCC----ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EE
Q 008927 241 SGSD----FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LF 315 (548)
Q Consensus 241 ~~~~----~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~ 315 (548)
+..+ ++..+.|||||++|++...... ..++||+++++.... +.+.+.... .....+ |++||+ ||
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~d~~~~~~--~~~~l~~~~----~~~~~~-~~~~g~~l~ 295 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANST----SGNRLYVKDLSQENA--PLLTVQGDL----DADVSL-VDNKGSTLY 295 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSS----SCCEEEEEETTSTTC--CCEEEECSS----SSCEEE-EEEETTEEE
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCC----CCcEEEEEECCCCCC--ceEEEeCCC----CceEEE-EeccCCEEE
Confidence 5544 4667899999999998764332 236999999974221 234444432 223333 788888 99
Q ss_pred EEEeCCCCeeeEEEEeccCCee---EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 316 FVTDRKNGFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 316 ~~sd~~~g~~~Ly~~d~~~g~~---~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
|+++++.....|+.+++++++. +.|++...+ .. .+.+ +++.|++...+++..+|+++|++++.
T Consensus 296 ~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~------~~-----~~s~---~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 296 LLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ------VL-----TVHS---GSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp EEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS------CE-----EEEE---ETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred EEECCCCCCCEEEEEeCCCCCccccEEEecCCCC------EE-----EEEE---ECCEEEEEEEECCeeEEEEEECCCCe
Confidence 9988744567899999988764 566653221 11 2333 68899999999999999999999887
Q ss_pred eEeecCCC-ceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCCCCCccCCCccCCeEEEeecc
Q 008927 393 LSLLDIPF-TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTE 469 (548)
Q Consensus 393 ~~~l~~~~-~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~pe~i~~~s~ 469 (548)
.+.|..+. ..+..+ +++++.+++..++.++|..||.+|+++++. ++|...+ ..++...+ .+|.+++++.
T Consensus 362 ~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~------~~l~~~~-~~~~~~~~-~~~~~~~~~~ 433 (693)
T 3iuj_A 362 VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI------SLYRASA-APFKPEDY-VSEQRFYQSK 433 (693)
T ss_dssp EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE------EEEECCC-SSCCGGGE-EEEEEEEECT
T ss_pred eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE------EEEEeCC-CCcChhhC-eeEEEEEecC
Confidence 78887653 334444 467889999999999999999999988874 3444443 23454444 5799999998
Q ss_pred CCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChhhhhcc
Q 008927 470 VPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSVPSTSI 546 (548)
Q Consensus 470 ~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai 546 (548)
||.+|+++|+.|++ +. .++++|+||++||||.....+.|+...+.|+++||+|+.+|+||+++||++|.++.
T Consensus 434 -dg~~i~~~l~~p~~--~~--~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 505 (693)
T 3iuj_A 434 -DGTRVPLIISYRKG--LK--LDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEYGQAWHLAG 505 (693)
T ss_dssp -TSCEEEEEEEEESS--CC--CSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTTCHHHHHTT
T ss_pred -CCcEEEEEEEecCC--CC--CCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCccCHHHHHhh
Confidence 99999999999975 32 25678999999999999999999999999999999999999999999999998874
No 7
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=2.5e-33 Score=315.11 Aligned_cols=407 Identities=14% Similarity=0.143 Sum_probs=285.6
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCC---CCCCCcccCCC-CCCccccceeeCCeeeEEECCEEEEEeCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAK---AGDEPSDITPK-EYAVRTTAQEYGGGAFRIFGDTVIFSNYK 163 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~---~~~~~~~lt~~-~~~~r~~v~~ygg~~~~~~~~~i~F~~~~ 163 (548)
..+..|. | |+++||+..... ..+..||+++.. + ++.+.|+.. ...... -...++.+|+|||+.|+|..+.
T Consensus 109 ~~~~~p~--pdG~~~~~~~~~~~-~~~~~l~~~~~~~~~~-~~~~~lld~~~l~~~~-~~~~~~~~~SPDG~~la~~~~~ 183 (741)
T 1yr2_A 109 ERFGLPQ--RRGASVFYSWNSGL-MNQSQLLVRPADAPVG-TKGRVLLDPNTWAKDG-ATALDAWAASDDGRLLAYSVQD 183 (741)
T ss_dssp CEECCCE--EETTEEEEEEECSS-CSSCEEEEEETTSCTT-CCCEEEECGGGCC-----EEEEEEEECTTSSEEEEEEEE
T ss_pred cccCCCE--EECCEEEEEEEcCC-CeEEEEEEEcCCccCC-CCCEEEECHHHhccCC-CEEEEeEEECCCCCEEEEEEcC
Confidence 4455555 6 999999986532 226788988754 3 466665432 111000 0123456899999999999754
Q ss_pred C----CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCC-----CCCCceeEEEEEECCCCCcc
Q 008927 164 D----QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-----DALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 164 ~----~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~-----~~~~~~~~l~~idl~~g~~~ 234 (548)
. .+||++++++ ++..+.+.. ...+..+.|||| +.|+|++.+... .......+||++++.++..
T Consensus 184 ~G~e~~~i~v~dl~t--g~~~~~~~~----~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~- 255 (741)
T 1yr2_A 184 GGSDWRTVKFVGVAD--GKPLADELK----WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS- 255 (741)
T ss_dssp TTCSEEEEEEEETTT--CCEEEEEEE----EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG-
T ss_pred CCCceEEEEEEECCC--CCCCCccCC----CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch-
Confidence 3 3699999998 666554322 234568899999 999998654321 0011245799999988751
Q ss_pred CcEEeeecCC---ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceee-eEEEcCCCCCcccCCcCceECc
Q 008927 235 EPKVLVSGSD---FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYK-RVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 235 ~~~~L~~~~~---~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~-~~~l~~~~~~~~~~~~~~~wsp 310 (548)
+.+.+....+ ++..+.|||||++|++...+..+ ..++||++++++ +.. + .+.+.... .....+ |+|
T Consensus 256 ~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~l~~~d~~~-~~~-~~~~~l~~~~----~~~~~~-~~~ 325 (741)
T 1yr2_A 256 ADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD---PVNTVHVARVTN-GKI-GPVTALIPDL----KAQWDF-VDG 325 (741)
T ss_dssp GCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC---SCCEEEEEEEET-TEE-CCCEEEECSS----SSCEEE-EEE
T ss_pred hCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC---CcceEEEEECCC-CCC-cccEEecCCC----CceEEE-Eec
Confidence 1245554432 56788999999999998855421 256899999984 421 2 33444332 223344 459
Q ss_pred CCc-EEEEEeCCCCeeeEEEEeccCC--eeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 311 KGE-LFFVTDRKNGFWNLHKWIESNN--EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 311 DG~-L~~~sd~~~g~~~Ly~~d~~~g--~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
||+ |++.++.+.....|++++++++ +.+.|++...+ . ...+.+ .++.|+++...++..+|++++
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-----~---l~~~~~-----~~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-----N---LESVGI-----AGNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-----E---EEEEEE-----EBTEEEEEEEETTEEEEEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-----e---EEEEEE-----ECCEEEEEEEECCEEEEEEEe
Confidence 999 9998887445788999999874 56777653211 0 112344 356888999999999999999
Q ss_pred CCCCceEeecCC-CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCCCCCccCCCccCCeEE
Q 008927 388 DFGHSLSLLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYKSYFSLPELI 464 (548)
Q Consensus 388 l~~g~~~~l~~~-~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~pe~i 464 (548)
++++..+.|+.+ ...+..+ +++++.++|..++..+|..||++|+.+++. ++|... ...++...+ .+|.+
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~------~~l~~~-~~~~~~~~~-~~~~~ 464 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT------TPWEPV-HLTFDPADF-RVEQV 464 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE------EECSCC-CCSSCGGGE-EEEEE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE------EEEecC-CCCCChhHC-EEEEE
Confidence 877667777754 3344444 578888999999999999999999988874 344442 223444333 68999
Q ss_pred EeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChhhhh
Q 008927 465 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSVPST 544 (548)
Q Consensus 465 ~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ 544 (548)
+|++. ||.+|+++++.|++ + ++++|+||++||||.....+.|+...+.|+++||+|+.+|+||+.+||++|.+
T Consensus 465 ~~~~~-dg~~i~~~~~~p~~--~----~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~ 537 (741)
T 1yr2_A 465 FYPSK-DGTKVPMFIVRRKD--A----KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHD 537 (741)
T ss_dssp EEECT-TSCEEEEEEEEETT--C----CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHH
T ss_pred EEEcC-CCCEEEEEEEecCC--C----CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHH
Confidence 99998 99999999999964 2 34689999999999998888999999999999999999999999999999987
Q ss_pred cc
Q 008927 545 SI 546 (548)
Q Consensus 545 ai 546 (548)
+.
T Consensus 538 ~~ 539 (741)
T 1yr2_A 538 AG 539 (741)
T ss_dssp TT
T ss_pred hh
Confidence 53
No 8
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=4e-33 Score=312.85 Aligned_cols=424 Identities=13% Similarity=0.121 Sum_probs=287.7
Q ss_pred CCcCCHHHHhcC----CCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCC-CC------------
Q 008927 76 KSPLTADVVSGA----SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YA------------ 137 (548)
Q Consensus 76 ~spit~~~l~~~----~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~-~~------------ 137 (548)
..+||.+++++. ...+..+++|| |++|++...+..+.+...|+.++..+ ++.++++... ..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 98 (741)
T 2ecf_A 20 AEKLTLEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS-GQTRLLVDSKVVLPGTETLSDEEKA 98 (741)
T ss_dssp --CCCHHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT-CCEEEEECGGGTC------------
T ss_pred cccccHHHHhccCCcCCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC-CceeEccchhhcccccccccchhhh
Confidence 689999999952 14677899999 99999987532222356777776653 4566665321 10
Q ss_pred c--cccc---eeeCCeeeEEECCEEEEEeCCCCeEEEEeCCCCCC---CceecCCCCCCCCceecceeeCCCCCEEEEEE
Q 008927 138 V--RTTA---QEYGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDS---SPLPITPDYGEPLVSYADGIFDPRFNRYVTVR 209 (548)
Q Consensus 138 ~--r~~v---~~ygg~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~---~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~ 209 (548)
. |.++ ......+|+|||+.|+|... ++||++++++ + +.++++... .....+.|||||++|+|++
T Consensus 99 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~--~~i~~~d~~~--~~~~~~~~l~~~~----~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 99 RRERQRIAAMTGIVDYQWSPDAQRLLFPLG--GELYLYDLKQ--EGKAAVRQLTHGE----GFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp --------CCEESCCCEECTTSSEEEEEET--TEEEEEESSS--CSTTSCCBCCCSS----SCEEEEEECTTSSEEEEEE
T ss_pred hhhhhhhccccCcceeEECCCCCEEEEEeC--CcEEEEECCC--CCcceEEEcccCC----cccccccCCCCCCEEEEEe
Confidence 0 0000 01234579999999999984 8899999987 6 677887652 3466789999999999974
Q ss_pred eccCCCCCCceeEEEEEECCCCCccCcEEeeecCCc-----------------eeeeEECCCCCEEEEEEecCCCCCC--
Q 008927 210 EDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF-----------------YAFPRMDPRGERMAWIEWHHPNMPW-- 270 (548)
Q Consensus 210 ~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~-----------------~~~p~~SPDGk~La~~~~~~~~~p~-- 270 (548)
. .+|+++|+++++ .++++..... ...+.|||||++|+|...+....++
T Consensus 171 ~----------~~i~~~d~~~g~---~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~ 237 (741)
T 2ecf_A 171 G----------RNLWVIDLASGR---QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQK 237 (741)
T ss_dssp T----------TEEEEEETTTTE---EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEE
T ss_pred C----------CcEEEEecCCCC---EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEe
Confidence 2 269999999987 6776643221 2568999999999998754321100
Q ss_pred -----------------------CCceEEEEEecCCCceee---------------------------------------
Q 008927 271 -----------------------DKAELWVGYISENGDVYK--------------------------------------- 288 (548)
Q Consensus 271 -----------------------~~~~L~v~~~~~~g~~~~--------------------------------------- 288 (548)
....|+++++++.++...
T Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~ 317 (741)
T 2ecf_A 238 RYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEV 317 (741)
T ss_dssp EEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEE
T ss_pred cCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEE
Confidence 112566666552021100
Q ss_pred -------eEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcce-e
Q 008927 289 -------RVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSY-E 360 (548)
Q Consensus 289 -------~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~-~ 360 (548)
..++..........+..+.|+|||++++.+++ +|..+||.++++++ .+.|+....+.. .. .
T Consensus 318 d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~~~-~~~l~~~~~~v~---------~~~~ 386 (741)
T 2ecf_A 318 TLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSKGK-AAALTHGNWSVD---------ELLA 386 (741)
T ss_dssp ETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSSSC-EEESCCSSSCEE---------EEEE
T ss_pred ECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCCCC-eeeeeecceEEE---------eEeE
Confidence 00000000000002357899999997777777 78889999998666 666764321111 12 2
Q ss_pred eeeecCCCCEEEEEEEeCC--eEEEEEEECCCCceEeecCCCce-eEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 008927 361 IIQSHGEKNLIACSYRQNG--RSYLGILDDFGHSLSLLDIPFTD-IDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 437 (548)
Q Consensus 361 ~~~~~~d~~~l~~~~~~~g--~~~L~~~dl~~g~~~~l~~~~~~-~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~ 437 (548)
|+| +++.|++....++ ..+||.++..++..+.|+..... .-.+++|++.+++..++...|+++|+++++++..
T Consensus 387 ~s~---dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~- 462 (741)
T 2ecf_A 387 VDE---KAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKI- 462 (741)
T ss_dssp EET---TTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEE-
T ss_pred EeC---CCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeE-
Confidence 554 7888988887665 77899999877667777753222 2234889999999999999999999999866543
Q ss_pred eeeeEEEecCCCC---C-CccCC--CccCCeEEEeeccCCC-eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc
Q 008927 438 AVDFKVVWSSSPD---T-LKYKS--YFSLPELIEFPTEVPG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR 510 (548)
Q Consensus 438 ~~~~~~~l~~~~~---~-~l~~~--~~~~pe~i~~~s~~dG-~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~ 510 (548)
+.|+.... . .+.+. .+..+|.++|++. || .+++++++.|.+ ++ +++++|+||++||||.....
T Consensus 463 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~~~~~~P~~--~~--~~~~~p~vv~~hG~~~~~~~ 532 (741)
T 2ecf_A 463 -----ATLVENDLADPKHPYARYREAQRPVEFGTLTAA-DGKTPLNYSVIKPAG--FD--PAKRYPVAVYVYGGPASQTV 532 (741)
T ss_dssp -----ECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECT-TSSCEEEEEEECCSS--CC--TTSCEEEEEECCCSTTCCSC
T ss_pred -----EEeccCcccccccchhhhhccCCCcEEEEEEcC-CCCEEEEEEEEeCCC--CC--CCCCcCEEEEEcCCCCcccc
Confidence 23333211 0 34444 6788999999998 99 999999999965 43 25678999999999987632
Q ss_pred -CccC-----hHHHHHHhcCcEEEEeCCCCCCCCChhhhhcc
Q 008927 511 -GILN-----LSIQYWTSRGWAFVDVNYGGSTGLSSVPSTSI 546 (548)
Q Consensus 511 -~~~~-----~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai 546 (548)
..|. ...++|+++||+|+.+|+||+.++|+.|.++.
T Consensus 533 ~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~ 574 (741)
T 2ecf_A 533 TDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGAL 574 (741)
T ss_dssp SSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTT
T ss_pred cccccccchhHHHHHHHhCCCEEEEEecCCCCCCChhhhHHH
Confidence 3454 57899999999999999999999999987654
No 9
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=5.1e-34 Score=311.59 Aligned_cols=383 Identities=15% Similarity=0.072 Sum_probs=271.0
Q ss_pred HHHHhcCCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCC-CCccccceeeCCeeeEEECCEEE
Q 008927 81 ADVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YAVRTTAQEYGGGAFRIFGDTVI 158 (548)
Q Consensus 81 ~~~l~~~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~-~~~r~~v~~ygg~~~~~~~~~i~ 158 (548)
++.+... .+..+.++| |++|+|...+ +|...||.+ .. ++.++||... ..+. ..+|+|| +|+
T Consensus 16 ~~~~~~~--~~~~~~~~~DG~~la~~s~~---~g~~~lw~~-~~--g~~~~lt~~~~~~~~-------~~~~spd--~~l 78 (582)
T 3o4h_A 16 VERLIAV--EKYSLQGVVDGDKLLVVGFS---EGSVNAYLY-DG--GETVKLNREPINSVL-------DPHYGVG--RVI 78 (582)
T ss_dssp HHHHHHS--CEEEEEEEETTTEEEEEEEE---TTEEEEEEE-ET--TEEEECCSSCCSEEC-------EECTTCS--EEE
T ss_pred HHHHhcc--chheeecCCCCCeEEEEEcc---CCceeEEEE-cC--CCcEeeecccccccc-------cccCCCC--eEE
Confidence 4444443 456778899 9999999865 588889987 22 5788888643 1222 2367766 788
Q ss_pred EEeCC---C--CeEEEEeC--CCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCC
Q 008927 159 FSNYK---D--QRLYKHSI--DSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (548)
Q Consensus 159 F~~~~---~--~~Ly~~~~--~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g 231 (548)
|+.+. + .+||.+++ ++ ..++++... ... ...|||||+.+++++...+ .++++|++++
T Consensus 79 ~~~~~~~g~~~~~l~~~~~~~~g---~~~~l~~~~---~~~--~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g 142 (582)
T 3o4h_A 79 LVRDVSKGAEQHALFKVNTSRPG---EEQRLEAVK---PMR--ILSGVDTGEAVVFTGATED--------RVALYALDGG 142 (582)
T ss_dssp EEEECSTTSCCEEEEEEETTSTT---CCEECTTSC---SBE--EEEEEECSSCEEEEEECSS--------CEEEEEEETT
T ss_pred EEeccCCCCcceEEEEEeccCCC---ccccccCCC---Cce--eeeeCCCCCeEEEEecCCC--------CceEEEccCC
Confidence 87654 2 28999998 54 345777652 223 4589999999888755432 2335588898
Q ss_pred CccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcC
Q 008927 232 NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 311 (548)
Q Consensus 232 ~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspD 311 (548)
+ .++|+.... ..+.|||||++|++.+.+..+ ...||++|+++ |+ .+.++... ..+..|.||||
T Consensus 143 ~---~~~l~~~~~--~~~~~spDG~~la~~~~~~~~----~~~i~~~d~~~-g~---~~~l~~~~----~~~~~~~~SpD 205 (582)
T 3o4h_A 143 G---LRELARLPG--FGFVSDIRGDLIAGLGFFGGG----RVSLFTSNLSS-GG---LRVFDSGE----GSFSSASISPG 205 (582)
T ss_dssp E---EEEEEEESS--CEEEEEEETTEEEEEEEEETT----EEEEEEEETTT-CC---CEEECCSS----CEEEEEEECTT
T ss_pred c---EEEeecCCC--ceEEECCCCCEEEEEEEcCCC----CeEEEEEcCCC-CC---ceEeecCC----CccccceECCC
Confidence 8 788876665 678999999999988755321 25699999984 54 34555543 45688999999
Q ss_pred CcEEEEEeCCCCeeeEEEEeccCCeeEeeccc-ccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCC
Q 008927 312 GELFFVTDRKNGFWNLHKWIESNNEVLAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (548)
Q Consensus 312 G~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~-~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~ 390 (548)
|+.++.+++ .+..+||++|+++++.+ ++.. ..+...+. ..+.....|+| |+ .++++...++..+||.+
T Consensus 206 G~~l~~~~~-~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~sp---dg-~~~~~~~~~g~~~l~~~---- 274 (582)
T 3o4h_A 206 MKVTAGLET-AREARLVTVDPRDGSVE-DLELPSKDFSSYR-PTAITWLGYLP---DG-RLAVVARREGRSAVFID---- 274 (582)
T ss_dssp SCEEEEEEC-SSCEEEEEECTTTCCEE-ECCCSCSHHHHHC-CSEEEEEEECT---TS-CEEEEEEETTEEEEEET----
T ss_pred CCEEEEccC-CCeeEEEEEcCCCCcEE-EccCCCcChhhhh-hccccceeEcC---CC-cEEEEEEcCCcEEEEEE----
Confidence 994346666 77789999999998877 4421 11111111 00000112554 66 88888888998888765
Q ss_pred CceEeecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCCCCCccC---CCccCCeEEEee
Q 008927 391 HSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPDTLKYK---SYFSLPELIEFP 467 (548)
Q Consensus 391 g~~~~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~~~~l~~---~~~~~pe~i~~~ 467 (548)
|+... .+...+..++..++.+++..++...|++||++|+++ +. +.| .+++ ..++++|.++|+
T Consensus 275 g~~~~--~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~-~~------~~l------~~~~~~~~~~~~~~~~~~~ 339 (582)
T 3o4h_A 275 GERVE--APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE-PL------LEG------GLPEDLRRSIAGSRLVWVE 339 (582)
T ss_dssp TEEEC--CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETTCC-EE------ECC------CCCHHHHHTEEEEEEEEEE
T ss_pred CCeec--cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcCCC-ce------EEE------ecCCccccccCcceEEEEE
Confidence 55443 222344444222666778888888999999998754 42 222 2343 667788999999
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChhhhhcc
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSVPSTSI 546 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai 546 (548)
+. ||.++++++|.|.+ + .+++|+||++||||.......|....++|+++||+|+.+||||++|||+.|.++.
T Consensus 340 ~~-~g~~i~~~~~~p~~--~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~s~~~~~ 411 (582)
T 3o4h_A 340 SF-DGSRVPTYVLESGR--A----PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKI 411 (582)
T ss_dssp CT-TSCEEEEEEEEETT--S----CSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSSSCHHHHHTT
T ss_pred CC-CCCEEEEEEEcCCC--C----CCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCCCchhHHhhh
Confidence 98 99999999999965 3 2378999999999999888889999999999999999999999999999988764
No 10
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=6.5e-32 Score=301.97 Aligned_cols=412 Identities=13% Similarity=0.107 Sum_probs=273.5
Q ss_pred ccCceEEcC-CCcEEEEEecCCCC---CceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCC
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEA---GRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ 165 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~---gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~ 165 (548)
.+..+.+|| |+.|++........ ....|+.++..+ ++.++|+..... ...+ ...+|+|||+.|+|..+ +
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~l~~~~~~-~~~~---~~~~~SPdG~~la~~~~--~ 134 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH-GDPQSLDPPEVS-NAKL---QYAGWGPKGQQLIFIFE--N 134 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS-CCCEECCCTTCC-SCCC---SBCCBCSSTTCEEEEET--T
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC-CceEeccCCccc-cccc---cccEECCCCCEEEEEEC--C
Confidence 367899999 99999886432111 124565555543 456666643211 0011 13479999999999984 6
Q ss_pred eEEEEeCCCCCCCceecCCCCCCCCc----------------eecceeeCCCCCEEEEEEeccCC---------------
Q 008927 166 RLYKHSIDSKDSSPLPITPDYGEPLV----------------SYADGIFDPRFNRYVTVREDRRQ--------------- 214 (548)
Q Consensus 166 ~Ly~~~~~~~~~~~~~lT~~~~~~~~----------------~~~~~~~SpDG~~i~~v~~~~~~--------------- 214 (548)
+||++++++ ++.++++.... ... ++..+.|||||+.|+|.+.+...
T Consensus 135 ~i~~~~~~~--g~~~~~~~~~~-~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~ 211 (723)
T 1xfd_A 135 NIYYCAHVG--KQAIRVVSTGK-EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYP 211 (723)
T ss_dssp EEEEESSSS--SCCEEEECCCB-TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSC
T ss_pred eEEEEECCC--CceEEEecCCC-CCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCC
Confidence 899999998 78888876421 111 12468899999999998654310
Q ss_pred ----------CCCCceeEEEEEECCCCCccCcEEeeec------CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEE
Q 008927 215 ----------DALNSTTEIVAIALNGQNIQEPKVLVSG------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVG 278 (548)
Q Consensus 215 ----------~~~~~~~~l~~idl~~g~~~~~~~L~~~------~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~ 278 (548)
+.......|+++|+.+++. .+.|... ......+.|||||+.|++...... ....|++.
T Consensus 212 ~~~~~~~~~~G~~~~~~~l~~~d~~~~~~--~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~i~~~ 285 (723)
T 1xfd_A 212 TVKPYHYPKAGSENPSISLHVIGLNGPTH--DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ----NVSILTLC 285 (723)
T ss_dssp CCEEEECCBTTSCCCEEEEEEEESSSSCC--CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS----CEEEEEEE
T ss_pred cceeccCCCCCCCCCeeEEEEEECCCCce--eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC----CeEEEEEE
Confidence 0011245899999999871 2556543 234567899999998865543221 24689999
Q ss_pred EecCCCceeeeEEEcCCCCCcccCC----cCceECcCCc-EEEE-EeCCCC----eeeEEEEe-ccCCe---eEeecccc
Q 008927 279 YISENGDVYKRVCVAGFDPTIVESP----TEPKWSSKGE-LFFV-TDRKNG----FWNLHKWI-ESNNE---VLAIYSLD 344 (548)
Q Consensus 279 ~~~~~g~~~~~~~l~~~~~~~~~~~----~~~~wspDG~-L~~~-sd~~~g----~~~Ly~~d-~~~g~---~~~l~~~~ 344 (548)
|+++ |+. ..++.... . ..+ ..+.|||||+ |++. +++ .+ ..+||.++ ..+++ .+.|+...
T Consensus 286 d~~~-g~~--~~~~~~~~-~--~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~ 358 (723)
T 1xfd_A 286 DATT-GVC--TKKHEDES-E--AWLHRQNEEPVFSKDGRKFFFIRAIP-QGGRGKFYHITVSSSQPNSSNDNIQSITSGD 358 (723)
T ss_dssp ETTT-CCE--EEEEEEEC-S--SCCCCCCCCCEECTTSCSEEEEEEEC-CSSSSCEEEEEEECSSCCSSSCCCCBSCCSS
T ss_pred eCCC-Ccc--eEEEEecc-C--CEEeccCCCceEcCCCCeEEEEEecc-cCCCcceeEEEEEeccCCCCccceeEeecCC
Confidence 9984 542 22222111 0 111 3789999999 8887 665 56 77899999 56666 66666321
Q ss_pred cccCCCcccccCcceeeeeecCCCCEEEEEEEeC--CeEEEEEEECCCC-ceEeecCC---CceeE--eeeecCCEEEEE
Q 008927 345 AEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN--GRSYLGILDDFGH-SLSLLDIP---FTDID--NITLGNDCLFVE 416 (548)
Q Consensus 345 ~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~--g~~~L~~~dl~~g-~~~~l~~~---~~~~~--~~s~d~~~l~~~ 416 (548)
.+.. ....|+| |++.|++....+ +..+||.+++.++ +.+.|+.. ...+. .+++|++.+++.
T Consensus 359 ~~~~--------~~~~~sp---dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 359 WDVT--------KILAYDE---KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp SCEE--------EEEEEET---TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred eEEE--------eeeEEcC---CCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 1110 1134555 889998887765 7788999998765 45556532 22232 347899999999
Q ss_pred EecCCCCCeEEEEEcCCCceeeeeeEEEecCCC--CCCccCCCccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCC
Q 008927 417 GASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSP--DTLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEK 494 (548)
Q Consensus 417 ~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~--~~~l~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~ 494 (548)
.++++.|..++. +...++. ..++.... ...+.+..+..+|.++|++. || ++++++|.|.+ ++ ++++
T Consensus 428 ~~~~~~p~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g-~l~~~~~~P~~--~~--~~~~ 495 (723)
T 1xfd_A 428 CEGPGVPMVTVH-NTTDKKK-----MFDLETNEHVKKAINDRQMPKVEYRDIEID-DY-NLPMQILKPAT--FT--DTTH 495 (723)
T ss_dssp CCSSSSCCEEEE-ETTTCCE-----EEEEECCHHHHHHHHTSCCCBCCBCCEEET-TE-EECCBEEBCSS--CC--SSSC
T ss_pred ccCCCCCeEEEE-ECCCCCE-----EEEeccChhhhhhhhhccCCCceEEEEEcC-Cc-eEEEEEEeCCC--CC--CCCc
Confidence 988888876554 6544432 12232210 01244566788999999998 99 99999999965 43 3578
Q ss_pred CcEEEEEccCccccc-cCcc--ChHHHHHHhcCcEEEEeCCCCCCCCChhhhhccc
Q 008927 495 PPLLVKSHGGPTSEA-RGIL--NLSIQYWTSRGWAFVDVNYGGSTGLSSVPSTSIF 547 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~-~~~~--~~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai~ 547 (548)
+|+||++||||..+. ...| .+..++|+++||+|+.+|+||+.++|++|.++.+
T Consensus 496 ~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~ 551 (723)
T 1xfd_A 496 YPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVR 551 (723)
T ss_dssp EEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTT
T ss_pred cCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHH
Confidence 999999999998753 3344 3667888899999999999999999999876653
No 11
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=9e-31 Score=292.17 Aligned_cols=407 Identities=14% Similarity=0.116 Sum_probs=275.7
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
..+..+.+||.+.+++.. ++. |+.++..+ ++.++++.....+ ....|+|||+.|+|.. +++||
T Consensus 82 ~~v~~~~~spd~~~~~~~-----~~~--i~~~d~~~-~~~~~l~~~~~~~-------~~~~~SpdG~~la~~~--~~~i~ 144 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFT-----QGG--LVGFDMLA-RKVTYLFDTNEET-------ASLDFSPVGDRVAYVR--NHNLY 144 (706)
T ss_dssp CCCEEEEETTTTEEEEEE-----TTE--EEEEETTT-TEEEEEECCTTCC-------TTCEECTTSSEEEEEE--TTEEE
T ss_pred cCceeEEECCCCeEEEEE-----CCE--EEEEECCC-CceEEccCCcccc-------cCCcCCCCCCEEEEEE--CCeEE
Confidence 356788999875555553 243 44444432 3566665432121 2357999999999986 67899
Q ss_pred EEeCCCC---CCCceecCCCCCCCCc------------eecceeeCCCCCEEEEEEeccCC-------------------
Q 008927 169 KHSIDSK---DSSPLPITPDYGEPLV------------SYADGIFDPRFNRYVTVREDRRQ------------------- 214 (548)
Q Consensus 169 ~~~~~~~---~~~~~~lT~~~~~~~~------------~~~~~~~SpDG~~i~~v~~~~~~------------------- 214 (548)
++++++. .++.++++.... ... +...+.|||||++|++.+.+...
T Consensus 145 v~~~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 145 IARGGKLGEGMSRAIAVTIDGT-ETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp EEECBCTTSCCCCCEESCSCCB-TTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred EEecCcccccCCCcEEeccCCC-CCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 9998740 034667766421 000 13678899999999998633110
Q ss_pred -----CCCCceeEEEEEECCCCCccCcEEeeec---CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCC-c
Q 008927 215 -----DALNSTTEIVAIALNGQNIQEPKVLVSG---SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG-D 285 (548)
Q Consensus 215 -----~~~~~~~~l~~idl~~g~~~~~~~L~~~---~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g-~ 285 (548)
+..+....|+++|+++++ .+.+..+ ......+.|||||++|++...+... ....|++.|+++ | .
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~-g~~ 296 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGK---TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAET-GRF 296 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTE---EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTT-CCE
T ss_pred eCCCCCCCCCeeEEEEEECCCCc---eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCC-Cce
Confidence 001235789999999987 6666532 2345688999999999987654321 245899999884 5 3
Q ss_pred eeeeEEEcCCCCCcccCCcCceECc--CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeee
Q 008927 286 VYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQ 363 (548)
Q Consensus 286 ~~~~~~l~~~~~~~~~~~~~~~wsp--DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~ 363 (548)
. ..+...........+..+.|+| ||++++.+++ .|..+||.++.+++..+.|+....... ....|+|
T Consensus 297 ~--~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~~~~~v~--------~~~~~sp 365 (706)
T 2z3z_A 297 V--RTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTKGEWEVT--------NFAGFDP 365 (706)
T ss_dssp E--EEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCCSSSCEE--------EEEEECT
T ss_pred e--eEEEEccCCCeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCCCCeEEE--------eeeEEcC
Confidence 2 1222111100001235689999 9997777777 788899999987777777764211110 0134554
Q ss_pred ecCCCCEEEEEEEeCC--eEEEEEEECCCCceEeecCCCcee-EeeeecCCEEEEEEecCCCCCeEEEEEcCCCceeeee
Q 008927 364 SHGEKNLIACSYRQNG--RSYLGILDDFGHSLSLLDIPFTDI-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVD 440 (548)
Q Consensus 364 ~~~d~~~l~~~~~~~g--~~~L~~~dl~~g~~~~l~~~~~~~-~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~ 440 (548)
+++.|++....++ ..+||.+|+++++.+.|+...... -.+++|++.+++..++...|.+|+++|+++++.
T Consensus 366 ---dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~---- 438 (706)
T 2z3z_A 366 ---KGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH---- 438 (706)
T ss_dssp ---TSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE----
T ss_pred ---CCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE----
Confidence 7888988876554 578999999998888777433222 234789999999988888999999999987762
Q ss_pred eEEEecCCCCCCccCCCccCCeEEEeeccCCC-eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc-CccCh---
Q 008927 441 FKVVWSSSPDTLKYKSYFSLPELIEFPTEVPG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNL--- 515 (548)
Q Consensus 441 ~~~~l~~~~~~~l~~~~~~~pe~i~~~s~~dG-~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~-~~~~~--- 515 (548)
..++.. ..+....++.++.+++++. || .+++++++.|.+ ++ +++++|+||++||||.++.. ..|..
T Consensus 439 --~~~~~~--~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~P~~--~~--~~~~~p~iv~~HGg~~~~~~~~~~~~~~~ 509 (706)
T 2z3z_A 439 --TLLEAK--NPDTGYAMPEIRTGTIMAA-DGQTPLYYKLTMPLH--FD--PAKKYPVIVYVYGGPHAQLVTKTWRSSVG 509 (706)
T ss_dssp --EEEECC--------CCCCEEEEEEECT-TSSSEEEEEEECCTT--CC--TTSCEEEEEECCCCTTCCCCCSCC----C
T ss_pred --eecccc--chhhhcCCCCcEEEEEEcC-CCCEEEEEEEEeCCC--CC--CCCCccEEEEecCCCCceeeccccccCch
Confidence 233332 2355566788899999998 99 899999999965 54 35788999999999998753 34543
Q ss_pred -HHHHHHhcCcEEEEeCCCCCCCCChhhhhccc
Q 008927 516 -SIQYWTSRGWAFVDVNYGGSTGLSSVPSTSIF 547 (548)
Q Consensus 516 -~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai~ 547 (548)
..++|+++||+|+.+|+||+.++|+.|.++++
T Consensus 510 ~~~~~la~~G~~v~~~d~rG~g~s~~~~~~~~~ 542 (706)
T 2z3z_A 510 GWDIYMAQKGYAVFTVDSRGSANRGAAFEQVIH 542 (706)
T ss_dssp CHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTT
T ss_pred HHHHHHHhCCcEEEEEecCCCcccchhHHHHHh
Confidence 68999999999999999999999999877654
No 12
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-31 Score=293.86 Aligned_cols=402 Identities=10% Similarity=0.045 Sum_probs=268.9
Q ss_pred ccCceEEcC-CCcEEEEEecCCC---CCceEEEEcCCCCCCCC---cccCCCCCCccccceeeCCeeeEEECCEEEEEeC
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTE---AGRGVLVKEPAKAGDEP---SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNY 162 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e---~gr~~l~~~~~~~~~~~---~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~ 162 (548)
.+..+.+|| |+.|++....... .+...|+.++..+ ++. ++|+.. + ...+|+|||+.|+|..
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~-g~~~~~~~l~~~---~-------~~~~~SPDG~~la~~~- 128 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN-GEFVRGNELPRP---I-------QYLCWSPVGSKLAYVY- 128 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT-TEECCSSCCCSS---B-------CCEEECSSTTCEEEEE-
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC-CccccceecCcc---c-------ccceECCCCCEEEEEE-
Confidence 467899999 9999998653100 1134566666543 344 444311 1 2358999999999997
Q ss_pred CCCeEEEEeCCCCCCCceecCCCCCCCC---------------ceecceeeCCCCCEEEEEEeccCCC------------
Q 008927 163 KDQRLYKHSIDSKDSSPLPITPDYGEPL---------------VSYADGIFDPRFNRYVTVREDRRQD------------ 215 (548)
Q Consensus 163 ~~~~Ly~~~~~~~~~~~~~lT~~~~~~~---------------~~~~~~~~SpDG~~i~~v~~~~~~~------------ 215 (548)
+++||+.++.+ ++.++||....... .+...+.|||||+.|+|.+.+....
T Consensus 129 -~~~i~~~~~~~--g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~ 205 (719)
T 1z68_A 129 -QNNIYLKQRPG--DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQ 205 (719)
T ss_dssp -TTEEEEESSTT--SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSS
T ss_pred -CCeEEEEeCCC--CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCC
Confidence 56899999987 77888875421000 0124789999999999986542110
Q ss_pred -------------CCCceeEEEEEECCCCCccCcE---Eee------ecCCceeeeEECCCCCEEEEEEecCCCCCCCCc
Q 008927 216 -------------ALNSTTEIVAIALNGQNIQEPK---VLV------SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKA 273 (548)
Q Consensus 216 -------------~~~~~~~l~~idl~~g~~~~~~---~L~------~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~ 273 (548)
.......|+++|+++++ .. .+. ........+.|||||+ +++...+... ...
T Consensus 206 ~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~---~~~ 278 (719)
T 1z68_A 206 YPRTINIPYPKAGAKNPVVRIFIIDTTYPA---YVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQ---NVS 278 (719)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEESSCHH---HHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESST---TEE
T ss_pred CccceeecCCCCCCCCCeeEEEEEECCCCC---ccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEecccc---CeE
Confidence 01134589999999886 32 332 1233467889999965 6655433221 245
Q ss_pred eEEEEE----ecCCCceeeeEEE----cCCCCCcccCCc-----CceECcCCc-EEEE-EeCCCCeeeEEEEeccCCeeE
Q 008927 274 ELWVGY----ISENGDVYKRVCV----AGFDPTIVESPT-----EPKWSSKGE-LFFV-TDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 274 ~L~v~~----~~~~g~~~~~~~l----~~~~~~~~~~~~-----~~~wspDG~-L~~~-sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
+|++++ ++ +|+.. .++ .+.. ..+. .+.|+|||+ |++. +++ .|..+||++++++++.+
T Consensus 279 ~l~~~d~~~~~~-~g~~~--~~~~~~~~~~~----~~~~~~~~~~~~~spdg~~l~~~~~~~-~g~~~l~~~~~~~~~~~ 350 (719)
T 1z68_A 279 VLSICDFREDWQ-TWDCP--KTQEHIEESRT----GWAGGFFVSTPVFSYDAISYYKIFSDK-DGYKHIHYIKDTVENAI 350 (719)
T ss_dssp EEEEEEECSSSS-SEECC--GGGEEEEECSS----SCSSSSSCCCCEECTTSSCEEEEEECT-TSCEEEEEESSCSTTCE
T ss_pred EEEEEcccCCCC-CCceE--EEEecccccCC----ceEccccCCccEECCCCCeEEEEEEcc-CCceEEEEEECCCCceE
Confidence 799999 65 34321 112 1222 2333 789999999 8775 555 88899999999888877
Q ss_pred eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEe----CCeEEEEEEECCCC--ceEeecCC----CceeE--ee
Q 008927 339 AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ----NGRSYLGILDDFGH--SLSLLDIP----FTDID--NI 406 (548)
Q Consensus 339 ~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~----~g~~~L~~~dl~~g--~~~~l~~~----~~~~~--~~ 406 (548)
.|+....++.. ..+. +++.|++.... .+..+||.++++++ +.+.|+.. ...+. .+
T Consensus 351 ~lt~~~~~v~~---------~~~~----d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 417 (719)
T 1z68_A 351 QITSGKWEAIN---------IFRV----TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASF 417 (719)
T ss_dssp ECSCSSSCEEE---------EEEE----CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEE
T ss_pred ecccCceEEEE---------EEEE----eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEE
Confidence 77743221111 1122 57889988866 57789999998766 45666532 11222 34
Q ss_pred eecCCEEEEEEecCCCCCeEEEEEcCCCceeeeeeEEEecCCCC---CCccCCCccCCeEEEeeccCCCeEEEEEEEcCC
Q 008927 407 TLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDFKVVWSSSPD---TLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPS 483 (548)
Q Consensus 407 s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~~~~l~~~~~---~~l~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~ 483 (548)
+++++.+++..++++.| .++++|+++++.. +++. .+. ..++...++.+|.+++++. | .++++++|.|+
T Consensus 418 s~dg~~l~~~~s~~~~p-~~~l~d~~~g~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~P~ 488 (719)
T 1z68_A 418 SDYAKYYALVCYGPGIP-ISTLHDGRTDQEI-----KILE-ENKELENALKNIQLPKEEIKKLEVD-E-ITLWYKMILPP 488 (719)
T ss_dssp CGGGSSEEEEECCBSSC-EEEEECSSSCCEE-----EEEE-CCHHHHHHTTSBCCCEEEEEEEEET-T-EEEEEEEEECT
T ss_pred CCCCCEEEEEcCCCCCC-eEEEEECCCCCEE-----EEee-cchhhhhhhccccCCceEEEEEecC-C-eEEEEEEEeCC
Confidence 78889888888877766 6888898777632 2232 222 1345566778899999997 7 99999999996
Q ss_pred CCCCCCCCCCCCcEEEEEccCccccc-cCccC--hHHHHHHhcCcEEEEeCCCCCCCCChhhhhccc
Q 008927 484 NPIYQASPEEKPPLLVKSHGGPTSEA-RGILN--LSIQYWTSRGWAFVDVNYGGSTGLSSVPSTSIF 547 (548)
Q Consensus 484 ~~~~~~~~~~~~Pliv~iHGGP~~~~-~~~~~--~~~Q~~asrGyaVl~~NyRGStGyG~~f~~ai~ 547 (548)
+ ++ +++++|+||++||||.... ...|. +..++++++||+|+.+|+||+.++|++|.++++
T Consensus 489 ~--~~--~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~ 551 (719)
T 1z68_A 489 Q--FD--RSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVY 551 (719)
T ss_dssp T--CC--SSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGT
T ss_pred C--CC--CCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHh
Confidence 5 43 3578899999999998764 34454 333444689999999999999999999876553
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=99.93 E-value=2.8e-23 Score=229.31 Aligned_cols=418 Identities=9% Similarity=-0.013 Sum_probs=261.1
Q ss_pred HHHhcCCCccCceEEcCCCcEEEEEecCCCCCceEEEEcC-C----CCCCCCcccCC-CCCCcc-ccceeeCCee-eEEE
Q 008927 82 DVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEP-A----KAGDEPSDITP-KEYAVR-TTAQEYGGGA-FRIF 153 (548)
Q Consensus 82 ~~l~~~~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~-~----~~~~~~~~lt~-~~~~~r-~~v~~ygg~~-~~~~ 153 (548)
..++....++..|..- |+++|+.-.... .-+ .||+.. . .+..+.+-|+. ..++.. ..-+.+.|.+ ++++
T Consensus 64 ~~~~~~~~ri~~p~~~-g~~~y~f~~d~~-~~~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~ 140 (711)
T 4hvt_A 64 ETIFYDQRKTPYGVIR-KGYVYNFWMDDK-NPQ-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQN 140 (711)
T ss_dssp HHHHTCTTSCCCCEEE-TTEEEEEECCSS-CSS-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSS
T ss_pred HHHhccccccCCcEEE-CCEEEEEEecCC-CCc-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeecCCC
Confidence 3445543468777777 999998865432 224 677652 1 00023333332 212211 1102344544 6678
Q ss_pred CCEEEEEeCCCC----eEEEEeCCCCCCCceecCCCCC-CC------CceecceeeCCCCCEEEEEEeccCCC--CCCce
Q 008927 154 GDTVIFSNYKDQ----RLYKHSIDSKDSSPLPITPDYG-EP------LVSYADGIFDPRFNRYVTVREDRRQD--ALNST 220 (548)
Q Consensus 154 ~~~i~F~~~~~~----~Ly~~~~~~~~~~~~~lT~~~~-~~------~~~~~~~~~SpDG~~i~~v~~~~~~~--~~~~~ 220 (548)
++++++.-.+.| .+..+|+.+ ++ .|..... .. .+++..++|. |++.+++........ .....
T Consensus 141 ~~~~~~~ls~~G~d~~~~~~~d~~t--~~--~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 141 PNRYLISMSFGGKDEMFFREWDLEK--KD--FVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp TTEEEEEEEETTCSEEEEEEEETTT--TE--ECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSB
T ss_pred CCEEEEEeCCCCCceeEEEEEECCc--CC--cCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCC
Confidence 888777743332 677888876 32 2222110 00 1245666887 667765532222111 11233
Q ss_pred eEEEEEECCCCCccCcEEeeecC--CceeeeEECCCCCE---EEEEEecCCCCCCCCceEEEEEecCC-CceeeeEEEcC
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGS--DFYAFPRMDPRGER---MAWIEWHHPNMPWDKAELWVGYISEN-GDVYKRVCVAG 294 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~--~~~~~p~~SPDGk~---La~~~~~~~~~p~~~~~L~v~~~~~~-g~~~~~~~l~~ 294 (548)
..+|..-+-+... +.+.|.++. +++..+..++|++. +.++..... +..+++|+.+++.. ++ ...+.-
T Consensus 216 ~~v~~~~~Gt~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~---~~~l~~ 288 (711)
T 4hvt_A 216 NSLYIWKRGESIE-KAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKD---FYNYDNYILDTKYKNLK---LQKINM 288 (711)
T ss_dssp CEEEEEETTSCGG-GCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESS---SSCEEEEEEECSSSSCE---EEECCS
T ss_pred CEEEEEECCCChH-HCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecc---cCceeEEEEcCCCCCCc---ceEeec
Confidence 5788888876531 245666543 34556778899885 234542211 23589999987521 32 233322
Q ss_pred CCCCcccCCcCceECcCCcEEEEEeCC-------CCeeeEEEEeccCC--------eeEe-ecccccccCCCcccccCcc
Q 008927 295 FDPTIVESPTEPKWSSKGELFFVTDRK-------NGFWNLHKWIESNN--------EVLA-IYSLDAEFSRPLWVFGINS 358 (548)
Q Consensus 295 ~~~~~~~~~~~~~wspDG~L~~~sd~~-------~g~~~Ly~~d~~~g--------~~~~-l~~~~~d~~~p~w~~~~~~ 358 (548)
.. ...+.+..+|++|+..... .....|+.++++++ +.+. +++. +......
T Consensus 289 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~ 354 (711)
T 4hvt_A 289 PS------DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPT--------ANEVFNF 354 (711)
T ss_dssp CT------TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCC--------TTEEEEE
T ss_pred CC------cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCC--------CCCeEEE
Confidence 11 1234567788877754220 12345899988664 2333 3321 1111123
Q ss_pred eeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc--eEe-ecCCC-ceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 359 YEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS--LSL-LDIPF-TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 359 ~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~--~~~-l~~~~-~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
+.+. ++.|++.+.+++..+|+++++.+|+ .+. +..+. +.+..+ +.+++.+++..++.+.|+++|++|+.
T Consensus 355 ~~~~-----~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 355 ISTT-----KDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEC-----SSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEE-----CCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 4453 4578889999999999999988774 445 55553 334433 46778899999999999999999987
Q ss_pred CCceeeeeeEEEecCCCCCCccCCCccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc
Q 008927 433 DHKLKAVDFKVVWSSSPDTLKYKSYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI 512 (548)
Q Consensus 433 ~~~~~~~~~~~~l~~~~~~~l~~~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~ 512 (548)
++. ++|+..+ ..+++..+ .+|.++|++. ||.+|+++|++|++ ++ +++++|+||++||||..+..+.
T Consensus 430 -~~~------~~l~~~~-~~~~~~~~-~~e~v~~~s~-DG~~i~~~l~~P~~--~~--~~~~~P~vl~~HGG~~~~~~~~ 495 (711)
T 4hvt_A 430 -HEL------KIIRKAL-YSFDSENY-VLEQKEATSF-DGVKIPYFLVYKKG--IK--FDGKNPTLLEAYGGFQVINAPY 495 (711)
T ss_dssp -SCE------EEEECCS-SCCCGGGE-EEEEEEEECT-TSCEEEEEEEEETT--CC--CSSCCCEEEECCCCTTCCCCCC
T ss_pred -CcE------EEEecCC-cccCcccC-eeEEEEEECC-CCeEEEEEEEecCC--CC--CCCCccEEEEECCCCCCCCCCc
Confidence 653 3454543 45566666 6899999998 99999999999976 32 3578999999999999999999
Q ss_pred cChHH-HHHHhcCcEEEEeCCCCCCCCChhhhhccc
Q 008927 513 LNLSI-QYWTSRGWAFVDVNYGGSTGLSSVPSTSIF 547 (548)
Q Consensus 513 ~~~~~-Q~~asrGyaVl~~NyRGStGyG~~f~~ai~ 547 (548)
|+... |+|+++||+|+.+|||||+|||++|.++..
T Consensus 496 ~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~ 531 (711)
T 4hvt_A 496 FSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQ 531 (711)
T ss_dssp CCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTS
T ss_pred ccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhh
Confidence 98776 699999999999999999999999988754
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=5.5e-22 Score=204.07 Aligned_cols=332 Identities=11% Similarity=0.110 Sum_probs=216.4
Q ss_pred cCCCCCCCcCCHHHHhcCC--------CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccc
Q 008927 70 APYGSWKSPLTADVVSGAS--------KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRT 140 (548)
Q Consensus 70 ~~~g~w~spit~~~l~~~~--------~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~ 140 (548)
.++..|..|.+-..+.... ..+.+|++|| |++|+|...+ +|..+||.++..+ ++.++++.......
T Consensus 9 ~~~~~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~---~g~~~l~~~d~~~-g~~~~lt~~~~~~~- 83 (388)
T 3pe7_A 9 LTFDTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF---DGPWNYYLLDLNT-QVATQLTEGRGDNT- 83 (388)
T ss_dssp CCCEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---TSSCEEEEEETTT-CEEEECCCSSCBCS-
T ss_pred ccceEEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC---CCCceEEEEeCCC-CceEEeeeCCCCCc-
Confidence 4566666665544333321 2233488999 9999999753 5777898887764 57888886432110
Q ss_pred cceeeCCeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC-----
Q 008927 141 TAQEYGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD----- 215 (548)
Q Consensus 141 ~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~----- 215 (548)
-+..|+|||+.|+|... +..||++++++ ++.+.++.... .........++|||+.|+++.....+.
T Consensus 84 -----~~~~~spdg~~l~~~~~-~~~l~~~d~~~--g~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 84 -----FGGFLSPDDDALFYVKD-GRNLMRVDLAT--LEENVVYQVPA-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp -----SSCEECTTSSEEEEEET-TTEEEEEETTT--CCEEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred -----cceEEcCCCCEEEEEeC-CCeEEEEECCC--Ccceeeeechh-hcccccceeECCCCCeeccccccCcccccccc
Confidence 13479999999999983 35899999998 77777765421 111122334699999988765432110
Q ss_pred --------CCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCce
Q 008927 216 --------ALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDV 286 (548)
Q Consensus 216 --------~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~ 286 (548)
.......|+++|+++++ .+.|+........+.||| ||++|+|+.....+ ....+||++++++ ++
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~-~~- 227 (388)
T 3pe7_A 155 WKKFHEFYFTKPCCRLMRVDLKTGE---STVILQENQWLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDG-TN- 227 (388)
T ss_dssp HHHHHHHGGGCCCEEEEEEETTTCC---EEEEEEESSCEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTS-CC-
T ss_pred cchhhhhhccCCcceEEEEECCCCc---eEEeecCCccccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCC-Cc-
Confidence 01134789999999998 888887777788999999 99999998742110 0145899999873 43
Q ss_pred eeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCee--eEEEEeccCCeeEeecccccccCCCcccccCcceeeee
Q 008927 287 YKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFW--NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQ 363 (548)
Q Consensus 287 ~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~--~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~ 363 (548)
.+.+...... ..+..+.|||||+ |+|+++. .+.. .||++|+++++.+.|+.... .....+... ...|+|
T Consensus 228 --~~~l~~~~~~--~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~~~--~~~~sp 299 (388)
T 3pe7_A 228 --MRKVKTHAEG--ESCTHEFWVPDGSALVYVSYL-KGSPDRFIYSADPETLENRQLTSMPA-CSHLMSNYD--GSLMVG 299 (388)
T ss_dssp --CEESCCCCTT--EEEEEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTTCCEEEEEEECC-EEEEEECTT--SSEEEE
T ss_pred --eEEeeeCCCC--cccccceECCCCCEEEEEecC-CCCCcceEEEEecCCCceEEEEcCCC-ceeeeecCC--CCeEcc
Confidence 3444443201 2456789999999 9898876 4544 49999999998877764221 000011111 123555
Q ss_pred ecCCCCEEEEEEEe------CCeEEEEEEECCCCceEeecCCCc-----------eeE--eeeecCCEEEEEEecCCCCC
Q 008927 364 SHGEKNLIACSYRQ------NGRSYLGILDDFGHSLSLLDIPFT-----------DID--NITLGNDCLFVEGASGVEPS 424 (548)
Q Consensus 364 ~~~d~~~l~~~~~~------~g~~~L~~~dl~~g~~~~l~~~~~-----------~~~--~~s~d~~~l~~~~ss~~~p~ 424 (548)
|++.|++.... .+...|+++|+++++.++|+.... .+. .+++|++.|+|.... ....
T Consensus 300 ---dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~ 375 (388)
T 3pe7_A 300 ---DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKP 375 (388)
T ss_dssp ---EECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSC
T ss_pred ---CCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCce
Confidence 78888876643 567789999999999888875432 122 347899999887654 4567
Q ss_pred eEEEEEcCCC
Q 008927 425 SVAKVTLDDH 434 (548)
Q Consensus 425 ~l~~~d~~~~ 434 (548)
.||++++..+
T Consensus 376 ~l~~~~l~~~ 385 (388)
T 3pe7_A 376 ALYLATLPES 385 (388)
T ss_dssp EEEEEECCGG
T ss_pred eEEEEECChh
Confidence 8999998654
No 15
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=2.3e-20 Score=209.54 Aligned_cols=318 Identities=9% Similarity=0.041 Sum_probs=208.0
Q ss_pred CcCCHHHHhcC--CCccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCC-CCCCccccceeeCCeeeEEE
Q 008927 77 SPLTADVVSGA--SKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITP-KEYAVRTTAQEYGGGAFRIF 153 (548)
Q Consensus 77 spit~~~l~~~--~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~-~~~~~r~~v~~ygg~~~~~~ 153 (548)
.+||.|+++.. ......++|+|++.+++.. +|...+|.... ++.+.++. ..+.... + ....-+|+||
T Consensus 3 ~~~tl~~~~~~~~~~~~~~~~w~~dg~~~~~~-----~~~i~~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~~~~Spd 72 (740)
T 4a5s_A 3 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ-----ENNILVFNAEY---GNSSVFLENSTFDEFG-H-SINDYSISPD 72 (740)
T ss_dssp EECCHHHHHHTCSCCCCCCEEECSSSEEEEEE-----TTEEEEEETTT---CCEEEEECTTTTTTCC-S-CCCEEEECTT
T ss_pred CceeHHHHhcCcccccccccEECCCCcEEEEc-----CCcEEEEECCC---CceEEEEechhhhhhc-c-cccceEECCC
Confidence 46899999874 2446689999833444433 35555554432 34455543 2211100 0 0011367899
Q ss_pred CCEEEEEeCC--------CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 154 GDTVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 154 ~~~i~F~~~~--------~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
|+.|+|.... .+.+|++++.+ ++.++|+... .....+.|||||++|+|+. + ++||+
T Consensus 73 g~~l~~~~~~~~~~r~~~~~~~~~~d~~~--~~~~~l~~~~----~~~~~~~~SPdG~~la~~~-~---------~~i~~ 136 (740)
T 4a5s_A 73 GQFILLEYNYVKQWRHSYTASYDIYDLNK--RQLITEERIP----NNTQWVTWSPVGHKLAYVW-N---------NDIYV 136 (740)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCC----TTEEEEEECSSTTCEEEEE-T---------TEEEE
T ss_pred CCEEEEEECCeeeEEEccceEEEEEECCC--CcEEEcccCC----CcceeeEECCCCCEEEEEE-C---------CeEEE
Confidence 9999998742 15789999998 7788887652 2466789999999999984 2 37999
Q ss_pred EECCCCCccCcEEeeecCC--c-----------------eeeeEECCCCCEEEEEEecCCCCC-----------------
Q 008927 226 IALNGQNIQEPKVLVSGSD--F-----------------YAFPRMDPRGERMAWIEWHHPNMP----------------- 269 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~--~-----------------~~~p~~SPDGk~La~~~~~~~~~p----------------- 269 (548)
+|+.+++ .++|+.... . ...+.|||||++|||.+.+....+
T Consensus 137 ~~~~~~~---~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 137 KIEPNLP---SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp ESSTTSC---CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EECCCCc---eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 9999998 788864321 1 124889999999999875433111
Q ss_pred -----------CCCceEEEEEecC---CCceeeeEEEcC------CCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEE
Q 008927 270 -----------WDKAELWVGYISE---NGDVYKRVCVAG------FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLH 328 (548)
Q Consensus 270 -----------~~~~~L~v~~~~~---~g~~~~~~~l~~------~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly 328 (548)
.....|+++++++ +..+. .+.+.. .. ..+..+.|||||+ +++..++..+...|+
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~~~~~----~~~~~~~wspdg~~~~~~~~r~~~~~~i~ 288 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASMLIGD----HYLCDVTWATQERISLQWLRRIQNYSVMD 288 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHHHTSC----EEEEEEEEEETTEEEEEEEESSTTEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccCCCCC----eEEEEEEEeCCCeEEEEEeCCCCCEEEEE
Confidence 0112689999984 32111 222322 22 4567899999999 777777756677899
Q ss_pred EEeccCCe-------eEeecccccccCCCccccc--CcceeeeeecCCCCEEE-EEEEeCCeEEEEEEECCCCceEeecC
Q 008927 329 KWIESNNE-------VLAIYSLDAEFSRPLWVFG--INSYEIIQSHGEKNLIA-CSYRQNGRSYLGILDDFGHSLSLLDI 398 (548)
Q Consensus 329 ~~d~~~g~-------~~~l~~~~~d~~~p~w~~~--~~~~~~~~~~~d~~~l~-~~~~~~g~~~L~~~dl~~g~~~~l~~ 398 (548)
++|+++|+ .+.+..+ ....|+.. .....|+| |++.|+ +...++|..+||++|+++++.++|+.
T Consensus 289 ~~d~~tg~~~~~~~~~~~l~~~----~~~~~v~~~~~~~p~fsp---DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~ 361 (740)
T 4a5s_A 289 ICDYDESSGRWNCLVARQHIEM----STTGWVGRFRPSEPHFTL---DGNSFYKIISNEEGYRHICYFQIDKKDCTFITK 361 (740)
T ss_dssp EEEEETTTTEEEECGGGCEEEE----CSSSCSSSSSCCCCEECT---TSSEEEEEEECTTSCEEEEEEETTCSSCEESCC
T ss_pred EEECCCCccccceeEEEEeeec----cCCceEccCcCCCceEcC---CCCEEEEEEEcCCCceEEEEEECCCCceEeccc
Confidence 99998887 2223211 12234321 12345665 888887 66667899999999999999999987
Q ss_pred CCceeEe-eeecCCEEEEEEec--C-CCCCeEEEEEcCCCc
Q 008927 399 PFTDIDN-ITLGNDCLFVEGAS--G-VEPSSVAKVTLDDHK 435 (548)
Q Consensus 399 ~~~~~~~-~s~d~~~l~~~~ss--~-~~p~~l~~~d~~~~~ 435 (548)
+...+.. +..|++.|+|+++. . ....+||++++++++
T Consensus 362 g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 362 GTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp SSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred CCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 6444433 35778999998865 1 345689999987654
No 16
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.85 E-value=1.4e-19 Score=183.19 Aligned_cols=306 Identities=10% Similarity=0.046 Sum_probs=197.4
Q ss_pred CCcCCHHHHhcCCCccCceEEcCCCcEEEEEecCC---CCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEE
Q 008927 76 KSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPT---EAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRI 152 (548)
Q Consensus 76 ~spit~~~l~~~~~~~~~~~~spg~~i~~~~~~~~---e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~ 152 (548)
+.+++++++++. +.+.+|++. |++|+|+...+. ......||.++..+ ++.++| . .+ ....|+|
T Consensus 3 ~~~~~~~~l~~~-~~~~~~~~d-G~~i~~~~~~~~~~~~~~~~~l~~~d~~~-~~~~~l--~--~~-------~~~~~Sp 68 (347)
T 2gop_A 3 SIEWNEKTFAKF-AYLSDPRTK-GELVAYVLTKANLKDNKYENTIVIENLKN-NARRFI--E--NA-------TMPRISP 68 (347)
T ss_dssp -------CCCCS-CEEEEEEEE-TTEEEEEEEEEETTTTEEEEEEEEEETTT-CCEEEE--E--SC-------EEEEECT
T ss_pred cccCCcccceee-EEcccceEC-CcEEEEEEeecCcccCCccceEEEEeCCC-CceEEc--c--cC-------CCeEECC
Confidence 457899999987 889999995 999999865432 12367888887664 456665 1 11 1347999
Q ss_pred ECCEEEEEeCCC----CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCC------------
Q 008927 153 FGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDA------------ 216 (548)
Q Consensus 153 ~~~~i~F~~~~~----~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~------------ 216 (548)
||+.|+|..... .+||++++++ ++.++++.. .. ...+.|||||+.|+|...+..+..
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~--g~~~~l~~~----~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLET--LSSKKILEA----KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEE----SE-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred CCCEEEEEEeccCCCcceEEEEECCC--CceEEEEcC----CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 999999987542 3799999987 788888875 23 677899999999999864311000
Q ss_pred ------CCceeEEEEEECCCCCccCc-EEeeecCCceeeeEECCCCCEEEEEEecCCCCC--CCCceEEEEEecCCCcee
Q 008927 217 ------LNSTTEIVAIALNGQNIQEP-KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMP--WDKAELWVGYISENGDVY 287 (548)
Q Consensus 217 ------~~~~~~l~~idl~~g~~~~~-~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p--~~~~~L~v~~~~~~g~~~ 287 (548)
.....+||++|+.+++ . +.|+. . ....+.||||| |+|+.......+ ....+||+++ +|+.
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~---~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d---~~~~- 210 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEE---VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE---DGKE- 210 (347)
T ss_dssp --------CEEEEEEEETTTTE---EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE---TTEE-
T ss_pred cCcccccCccceEEEEECCCCe---EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC---CCce-
Confidence 0124789999999998 6 77776 3 56678999999 777763322211 1145899888 3542
Q ss_pred eeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCC----CeeeEEEEeccCCeeEeeccc-ccccCCCcccccCcceee
Q 008927 288 KRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKN----GFWNLHKWIESNNEVLAIYSL-DAEFSRPLWVFGINSYEI 361 (548)
Q Consensus 288 ~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~----g~~~Ly~~d~~~g~~~~l~~~-~~d~~~p~w~~~~~~~~~ 361 (548)
+.+.... .+. .++|||+ |++.++... ....||.++ +++.+.++.. +..+.. ...|
T Consensus 211 --~~l~~~~-----~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~--------~~~~ 271 (347)
T 2gop_A 211 --EKMFEKV-----SFY--AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQ--------AKIK 271 (347)
T ss_dssp --EEEEEEE-----SEE--EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEE--------EEEE
T ss_pred --EEeccCc-----cee--eECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCC--------ccEE
Confidence 2232211 122 3499999 888875421 246899999 6777777642 111111 0233
Q ss_pred eeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCceeeeee
Q 008927 362 IQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKAVDF 441 (548)
Q Consensus 362 ~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~~~~ 441 (548)
.++ +++....++..+|| ++ +|+.+.+......+..++... .++++.++...|.+||.+| ++.
T Consensus 272 -----sdg-~~~~~~~~~~~~l~-~~--~g~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~---g~~----- 333 (347)
T 2gop_A 272 -----DGK-VYFTLFEEGSVNLY-IW--DGEIKPIAKGRHWIMGFDVDE-IVVYLKETATRLRELFTWD---GEE----- 333 (347)
T ss_dssp -----TTE-EEEEEEETTEEEEE-EE--SSSEEEEECSSSEEEEEEESS-SEEEEEECSSSCCEEEEES---SSE-----
T ss_pred -----cCc-EEEEEecCCcEEEE-Ec--CCceEEEecCCCeEEeeeeeC-cEEEEEcCCCChHHheEeC---CcE-----
Confidence 223 88888888999999 98 466666654444455554333 6888888888888999997 443
Q ss_pred EEEecCCCCC
Q 008927 442 KVVWSSSPDT 451 (548)
Q Consensus 442 ~~~l~~~~~~ 451 (548)
+.|+..+..
T Consensus 334 -~~lt~~n~~ 342 (347)
T 2gop_A 334 -KQLTDYNDP 342 (347)
T ss_dssp -EECCCTTST
T ss_pred -EEeccccHh
Confidence 345565543
No 17
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.84 E-value=3.6e-20 Score=190.53 Aligned_cols=324 Identities=12% Similarity=0.075 Sum_probs=210.2
Q ss_pred ccccCCCCCCCcCCHHHHhcCCC--------ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCC
Q 008927 67 KITAPYGSWKSPLTADVVSGASK--------RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYA 137 (548)
Q Consensus 67 ~~~~~~g~w~spit~~~l~~~~~--------~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~ 137 (548)
..+.+|++|..+.+-+.+..... .+.++++|| |++|+|+... .|...||.++..+ ++.++++.....
T Consensus 6 ~~~~~~~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~---~g~~~l~~~d~~~-~~~~~l~~~~~~ 81 (396)
T 3c5m_A 6 VITLNFETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDF---DGNRNYYLLNLET-QQAVQLTEGKGD 81 (396)
T ss_dssp EEECCEEEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT---TSSCEEEEEETTT-TEEEECCCSSCB
T ss_pred ccchhhheeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEec---CCCceEEEEECCC-CcEEEeecCCCC
Confidence 45678889988877655433321 167899999 9999999754 4667788877653 467777754311
Q ss_pred ccccceeeCCeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecc-------------------eee
Q 008927 138 VRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYAD-------------------GIF 198 (548)
Q Consensus 138 ~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~-------------------~~~ 198 (548)
......|+|||+.|+|.... .+||++++++ ++.++++.... ....+ ..|
T Consensus 82 ------~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~--~~~~~~~~~~~---~~~~~g~~l~~~~~~~~~~~~~~~~~~ 149 (396)
T 3c5m_A 82 ------NTFGGFISTDERAFFYVKNE-LNLMKVDLET--LEEQVIYTVDE---EWKGYGTWVANSDCTKLVGIEILKRDW 149 (396)
T ss_dssp ------CTTTCEECTTSSEEEEEETT-TEEEEEETTT--CCEEEEEECCT---TEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred ------ccccceECCCCCEEEEEEcC-CcEEEEECCC--CCcEEEEeccc---ccCCCCCEEEeccCCcccccccccccc
Confidence 11235789999999999854 4899999987 77787776421 10111 345
Q ss_pred CCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECC-CCCEEEEEEecCCCCCCCCceEEE
Q 008927 199 DPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWV 277 (548)
Q Consensus 199 SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v 277 (548)
+|||+.+++...... .....|+++|+++++ .+.+......+..+.||| ||++|+|+.. .+.. ....+||+
T Consensus 150 spdg~~~~~~~~~~~----~~~~~l~~~d~~~g~---~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~~~-~~~~~l~~ 220 (396)
T 3c5m_A 150 QPLTSWEKFAEFYHT----NPTCRLIKVDIETGE---LEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GPHD-LVDARMWL 220 (396)
T ss_dssp CCCCSHHHHHHHHHT----CCCEEEEEEETTTCC---EEEEEEESSCEEEEEEETTEEEEEEEEEC-SCSS-SCSCCCEE
T ss_pred CCCCcceeeeeeccC----CCcceEEEEECCCCc---EEeeccCCcccccceECCCCCCEEEEEec-CCCC-CCCceEEE
Confidence 666665544310000 134689999999998 777776666678899999 8999999873 2110 01258999
Q ss_pred EEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeee--EEEEeccCCeeEeecccccccCCCcccc
Q 008927 278 GYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWN--LHKWIESNNEVLAIYSLDAEFSRPLWVF 354 (548)
Q Consensus 278 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~--Ly~~d~~~g~~~~l~~~~~d~~~p~w~~ 354 (548)
+++++ ++ .+.+...... ..+..+.|+|||+ |++.+.. .+... ||++|+++++.+.+.... .+.
T Consensus 221 ~d~~~-~~---~~~l~~~~~~--~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~~~~------~~~- 286 (396)
T 3c5m_A 221 VNEDG-SN---VRKIKEHAEG--ESCTHEFWIPDGSAMAYVSYF-KGQTDRVIYKANPETLENEEVMVMP------PCS- 286 (396)
T ss_dssp EETTS-CC---CEESSCCCTT--EEEEEEEECTTSSCEEEEEEE-TTTCCEEEEEECTTTCCEEEEEECC------SEE-
T ss_pred EECCC-Cc---eeEeeccCCC--ccccceEECCCCCEEEEEecC-CCCccceEEEEECCCCCeEEeeeCC------CCC-
Confidence 99873 43 2333332101 3466789999999 8888765 44444 999999988877775321 111
Q ss_pred cCcceeeeeecCCCCEEEEEEE-------------eCCeEEEEEEECCCCceEeecCCCc------------ee-Eeeee
Q 008927 355 GINSYEIIQSHGEKNLIACSYR-------------QNGRSYLGILDDFGHSLSLLDIPFT------------DI-DNITL 408 (548)
Q Consensus 355 ~~~~~~~~~~~~d~~~l~~~~~-------------~~g~~~L~~~dl~~g~~~~l~~~~~------------~~-~~~s~ 408 (548)
..|+| .|++.|++... .++...|+++|+++++.+.|+.... .. ..+++
T Consensus 287 ----~~~s~--~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 287 ----HLMSN--FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp ----EEEEC--SSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred ----CCccC--CCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEcc
Confidence 22331 04555544321 1355789999999998777764322 11 12478
Q ss_pred cCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 409 GNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 409 d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
|++.|+|.... .....||++++++++.
T Consensus 361 dg~~l~~~s~~-~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 361 NDDGVLFTSDF-EGVPAIYIADVPESYK 387 (396)
T ss_dssp TSSEEEEEECT-TSSCEEEEEECCTTCC
T ss_pred CCCeEEEEecC-CCCceEEEEEEccccc
Confidence 89988887754 3467899999887763
No 18
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=3.3e-18 Score=178.73 Aligned_cols=240 Identities=13% Similarity=0.138 Sum_probs=176.9
Q ss_pred CCEEEEEeCC--C---CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 154 GDTVIFSNYK--D---QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 154 ~~~i~F~~~~--~---~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+.+|+|.... + +.|++.++++ +..+.|+... ..+..+.|||||+.|++++.+.. ...|+++|+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g--~~~~~l~~~~----~~v~~~~~Spdg~~la~~s~~~~------~~~i~~~d~ 210 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG--YNQFVVHRSP----QPLMSPAWSPDGSKLAYVTFESG------RSALVIQTL 210 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS--CSCEEEEEES----SCEEEEEECTTSSEEEEEECTTS------SCEEEEEET
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC--CCCEEEeCCC----CcceeeEEcCCCCEEEEEEecCC------CcEEEEEEC
Confidence 6688888753 2 6899999987 7778887542 34667899999999999865431 358999999
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
++++ .+.+.........++|||||++|+|..... ...+||++|++. ++ ...+.... ..+..+.|
T Consensus 211 ~tg~---~~~l~~~~~~~~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~-~~---~~~l~~~~----~~~~~~~~ 274 (415)
T 2hqs_A 211 ANGA---VRQVASFPRHNGAPAFSPDGSKLAFALSKT-----GSLNLYVMDLAS-GQ---IRQVTDGR----SNNTEPTW 274 (415)
T ss_dssp TTCC---EEEEECCSSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTT-CC---EEECCCCS----SCEEEEEE
T ss_pred CCCc---EEEeecCCCcccCEEEcCCCCEEEEEEecC-----CCceEEEEECCC-CC---EEeCcCCC----CcccceEE
Confidence 9998 777776666678899999999999876322 245799999984 54 34454433 45678999
Q ss_pred CcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 309 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 309 spDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+|||+ |++.+++ .+..+||++|+.+++.+.++.... +. ....|+| +++.|++....++...|+++|
T Consensus 275 spdg~~l~~~s~~-~g~~~i~~~d~~~~~~~~l~~~~~------~~---~~~~~sp---dG~~l~~~~~~~g~~~i~~~d 341 (415)
T 2hqs_A 275 FPDSQNLAFTSDQ-AGRPQVYKVNINGGAPQRITWEGS------QN---QDADVSS---DGKFMVMVSSNGGQQHIAKQD 341 (415)
T ss_dssp CTTSSEEEEEECT-TSSCEEEEEETTSSCCEECCCSSS------EE---EEEEECT---TSSEEEEEEECSSCEEEEEEE
T ss_pred CCCCCEEEEEECC-CCCcEEEEEECCCCCEEEEecCCC------cc---cCeEECC---CCCEEEEEECcCCceEEEEEE
Confidence 99999 8888876 677899999998888776653211 11 1234554 888898887777788999999
Q ss_pred CCCCceEeecCCCceeE--eeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 388 DFGHSLSLLDIPFTDID--NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 388 l~~g~~~~l~~~~~~~~--~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+++++.+.|.... .+. .++++++.|++.... .....||++|++++..
T Consensus 342 ~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 342 LATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVSTDGRFK 390 (415)
T ss_dssp TTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEETTSCCE
T ss_pred CCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEECCCCcE
Confidence 9999888776543 332 237888888776653 3345899999976653
No 19
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.82 E-value=5.2e-18 Score=177.18 Aligned_cols=256 Identities=11% Similarity=0.087 Sum_probs=181.7
Q ss_pred CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC--CeEEEEeCCCCC
Q 008927 99 HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD--QRLYKHSIDSKD 176 (548)
Q Consensus 99 g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~--~~Ly~~~~~~~~ 176 (548)
+++++|+.....++....|+.++.++ +..+.|+.....+ ...+|+|+|+.|+|....+ ..||+.++.+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v-------~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t-- 212 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPL-------MSPAWSPDGSKLAYVTFESGRSALVIQTLAN-- 212 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCE-------EEEEECTTSSEEEEEECTTSSCEEEEEETTT--
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcc-------eeeEEcCCCCEEEEEEecCCCcEEEEEECCC--
Confidence 78899987543222125676666553 4566666432122 1247899999999998543 5899999987
Q ss_pred CCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCC
Q 008927 177 SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGE 256 (548)
Q Consensus 177 ~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk 256 (548)
++.+.++... .....+.|||||+.|+|+.... ....||++|+.+++ .+.++........+.|||||+
T Consensus 213 g~~~~l~~~~----~~~~~~~~spdg~~la~~~~~~------g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 213 GAVRQVASFP----RHNGAPAFSPDGSKLAFALSKT------GSLNLYVMDLASGQ---IRQVTDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp CCEEEEECCS----SCEEEEEECTTSSEEEEEECTT------SSCEEEEEETTTCC---EEECCCCSSCEEEEEECTTSS
T ss_pred CcEEEeecCC----CcccCEEEcCCCCEEEEEEecC------CCceEEEEECCCCC---EEeCcCCCCcccceEECCCCC
Confidence 7777777642 3456789999999999875432 13579999999998 778876666677899999999
Q ss_pred EEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCC
Q 008927 257 RMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN 335 (548)
Q Consensus 257 ~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g 335 (548)
+|++.+.+. ...+||++++++ ++ .+.+.... ..+..+.|+|||+ |++.+.. .+...|+++|++++
T Consensus 280 ~l~~~s~~~-----g~~~i~~~d~~~-~~---~~~l~~~~----~~~~~~~~spdG~~l~~~~~~-~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 280 NLAFTSDQA-----GRPQVYKVNING-GA---PQRITWEG----SQNQDADVSSDGKFMVMVSSN-GGQQHIAKQDLATG 345 (415)
T ss_dssp EEEEEECTT-----SSCEEEEEETTS-SC---CEECCCSS----SEEEEEEECTTSSEEEEEEEC-SSCEEEEEEETTTC
T ss_pred EEEEEECCC-----CCcEEEEEECCC-CC---EEEEecCC----CcccCeEECCCCCEEEEEECc-CCceEEEEEECCCC
Confidence 999887322 135899999874 54 23343322 3456789999999 7777655 56788999999998
Q ss_pred eeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCCceeE
Q 008927 336 EVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDID 404 (548)
Q Consensus 336 ~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~ 404 (548)
+.+.++... .. ....|.| +++.|++....++...|+++|++++..+.|+...+.+.
T Consensus 346 ~~~~l~~~~-~~---------~~~~~sp---dg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~ 401 (415)
T 2hqs_A 346 GVQVLSSTF-LD---------ETPSLAP---NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVK 401 (415)
T ss_dssp CEEECCCSS-SC---------EEEEECT---TSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEE
T ss_pred CEEEecCCC-Cc---------CCeEEcC---CCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCc
Confidence 887775321 11 1234554 88889888888888899999999888888876544443
No 20
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=1.2e-17 Score=186.24 Aligned_cols=323 Identities=10% Similarity=0.011 Sum_probs=204.4
Q ss_pred CCCcCCHHHHhcCC--CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeE
Q 008927 75 WKSPLTADVVSGAS--KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFR 151 (548)
Q Consensus 75 w~spit~~~l~~~~--~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~ 151 (548)
|..++|.++++... .....+.|+| |+.+ +. . .+| .|+.++..+ ++.+.++...-.....+ ...+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~-~~-~---~dg--~i~~~d~~~-g~~~~~~~~~~~~~~~v---~~~~~S 69 (723)
T 1xfd_A 1 QKKKVTVEDLFSEDFKIHDPEAKWISDTEFI-YR-E---QKG--TVRLWNVET-NTSTVLIEGKKIESLRA---IRYEIS 69 (723)
T ss_dssp CCCCCCHHHHTCTTTCCCCCCCCBSSSSCBC-CC-C---SSS--CEEEBCGGG-CCCEEEECTTTTTTTTC---SEEEEC
T ss_pred CCccccHHHHhCCCCcccccccEEcCCCcEE-EE-e---CCC--CEEEEECCC-CcEEEEecccccccccc---ceEEEC
Confidence 45789999998752 3366889999 6633 32 1 245 455555443 35555553211000011 224789
Q ss_pred EECCEEEEEeCC--------CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 008927 152 IFGDTVIFSNYK--------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 152 ~~~~~i~F~~~~--------~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l 223 (548)
|||+.|+|.... ++.||+.++++ ++.++|+.... .......+.|||||++|+|++. .+|
T Consensus 70 pDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~----------~~i 136 (723)
T 1xfd_A 70 PDREYALFSYNVEPIYQHSYTGYYVLSKIPH--GDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE----------NNI 136 (723)
T ss_dssp TTSSEEEEEESCCCCSSSCCCSEEEEEESSS--CCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET----------TEE
T ss_pred CCCCEEEEEecCccceeecceeeEEEEECCC--CceEeccCCcc-ccccccccEECCCCCEEEEEEC----------CeE
Confidence 999999998643 26899999987 77788876421 1123567889999999999853 269
Q ss_pred EEEECCCCCccCcEEeeecC-Cc------------------eeeeEECCCCCEEEEEEecCCCC----------------
Q 008927 224 VAIALNGQNIQEPKVLVSGS-DF------------------YAFPRMDPRGERMAWIEWHHPNM---------------- 268 (548)
Q Consensus 224 ~~idl~~g~~~~~~~L~~~~-~~------------------~~~p~~SPDGk~La~~~~~~~~~---------------- 268 (548)
|++|+++++ .++++... .. +..+.|||||++|+|.+.+....
T Consensus 137 ~~~~~~~g~---~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (723)
T 1xfd_A 137 YYCAHVGKQ---AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213 (723)
T ss_dssp EEESSSSSC---CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCC
T ss_pred EEEECCCCc---eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcc
Confidence 999999998 77776542 11 15689999999999987553211
Q ss_pred ----------CCCCceEEEEEecCCCceeeeEEEcCCCC--CcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCC
Q 008927 269 ----------PWDKAELWVGYISENGDVYKRVCVAGFDP--TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN 335 (548)
Q Consensus 269 ----------p~~~~~L~v~~~~~~g~~~~~~~l~~~~~--~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g 335 (548)
.-....|++.|+++ ++. .+.+..... .....+..+.|||||+ |++.+++..+...|+++|++++
T Consensus 214 ~~~~~~~~G~~~~~~~l~~~d~~~-~~~--~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 214 KPYHYPKAGSENPSISLHVIGLNG-PTH--DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEECCBTTSCCCEEEEEEEESSS-SCC--CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred eeccCCCCCCCCCeeEEEEEECCC-Cce--eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 00123789999874 431 233332110 0003456789999999 6566666456678999999999
Q ss_pred eeEeecccccccCCCccccc-CcceeeeeecCCCCEEEEE-EEeCC----eEEEEEEE-CCCCc---eEeecCC-CceeE
Q 008927 336 EVLAIYSLDAEFSRPLWVFG-INSYEIIQSHGEKNLIACS-YRQNG----RSYLGILD-DFGHS---LSLLDIP-FTDID 404 (548)
Q Consensus 336 ~~~~l~~~~~d~~~p~w~~~-~~~~~~~~~~~d~~~l~~~-~~~~g----~~~L~~~d-l~~g~---~~~l~~~-~~~~~ 404 (548)
+.+.+..... ..|+.. .....|+| |++.|++. ...++ ..+|+++| ..+++ .+.|+.+ .....
T Consensus 291 ~~~~~~~~~~----~~~~~~~~~~~~~sp---dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~ 363 (723)
T 1xfd_A 291 VCTKKHEDES----EAWLHRQNEEPVFSK---DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTK 363 (723)
T ss_dssp CEEEEEEEEC----SSCCCCCCCCCEECT---TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEE
T ss_pred cceEEEEecc----CCEEeccCCCceEcC---CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEe
Confidence 8776653211 122110 01245655 88888887 55666 78999999 57777 6777753 32222
Q ss_pred --eeeecCCEEEEEEecC-CCCCeEEEEEcCCC
Q 008927 405 --NITLGNDCLFVEGASG-VEPSSVAKVTLDDH 434 (548)
Q Consensus 405 --~~s~d~~~l~~~~ss~-~~p~~l~~~d~~~~ 434 (548)
.+++|++.|+|..... .....||.+++.++
T Consensus 364 ~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 364 ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp EEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred eeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 3588999998877542 13457888876554
No 21
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=8.3e-18 Score=172.71 Aligned_cols=287 Identities=9% Similarity=0.054 Sum_probs=184.0
Q ss_pred eEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCC--eEEEEeCCCCCCCceecCCCCCCCCce
Q 008927 115 GVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ--RLYKHSIDSKDSSPLPITPDYGEPLVS 192 (548)
Q Consensus 115 ~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~--~Ly~~~~~~~~~~~~~lT~~~~~~~~~ 192 (548)
..+|.....+ +..++||..+...... -+...+|+|||++|+|....++ +||++++++ ++.+++|... ...
T Consensus 11 ~~~~~~~~~g-~~~~~lt~~~~~~~~~--~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~--g~~~~lt~~~---~~~ 82 (388)
T 3pe7_A 11 FDTYQDASTG-AQVTRLTPPDVTCHRN--YFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNT--QVATQLTEGR---GDN 82 (388)
T ss_dssp CEEEECTTTC-CEEEECSCTTSCEECC--CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTT--CEEEECCCSS---CBC
T ss_pred ceEEecCCCC-cceEEecCCcccccch--hhcCccCCCCCCEEEEEEcCCCCceEEEEeCCC--CceEEeeeCC---CCC
Confidence 3455544432 4667777543221110 1123579999999999987554 799999998 8899998763 122
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCc-ee--eeEECCCCCEEEEEEecCCC-C
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF-YA--FPRMDPRGERMAWIEWHHPN-M 268 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~-~~--~p~~SPDGk~La~~~~~~~~-~ 268 (548)
...+.|||||++|+|+..+ ..|+++|+++++ .+.+...+.. .. ...++|||+.|+.+.....+ .
T Consensus 83 ~~~~~~spdg~~l~~~~~~---------~~l~~~d~~~g~---~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDG---------RNLMRVDLATLE---ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWV 150 (388)
T ss_dssp SSSCEECTTSSEEEEEETT---------TEEEEEETTTCC---EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC
T ss_pred ccceEEcCCCCEEEEEeCC---------CeEEEEECCCCc---ceeeeechhhcccccceeECCCCCeeccccccCcccc
Confidence 3357899999999998532 379999999998 7777655433 22 23459999998865422111 0
Q ss_pred C-------------CCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc-CCc-EEEEEeCC--CCeeeEEEEe
Q 008927 269 P-------------WDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGE-LFFVTDRK--NGFWNLHKWI 331 (548)
Q Consensus 269 p-------------~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp-DG~-L~~~sd~~--~g~~~Ly~~d 331 (548)
+ -....|+++++++ |+ .+.+.... ..+..+.|+| ||+ |+|.++.. .+..+||.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~-g~---~~~l~~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKT-GE---STVILQEN----QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLIN 222 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTT-CC---EEEEEEES----SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEE
T ss_pred cccccchhhhhhccCCcceEEEEECCC-Cc---eEEeecCC----ccccccEECCCCCCEEEEEEecCCCCCcceEEEEe
Confidence 0 0136899999984 54 23333322 3467899999 999 88887641 1256899999
Q ss_pred ccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeE--EEEEEECCCCceEeecC-CCc-e----e
Q 008927 332 ESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS--YLGILDDFGHSLSLLDI-PFT-D----I 403 (548)
Q Consensus 332 ~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~--~L~~~dl~~g~~~~l~~-~~~-~----~ 403 (548)
+++++.+.|+.... ..+. ....|+| |++.|++.....+.. .|+++|+++|+.+.|+. +.. . .
T Consensus 223 ~~~~~~~~l~~~~~----~~~~---~~~~~sp---dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~ 292 (388)
T 3pe7_A 223 EDGTNMRKVKTHAE----GESC---THEFWVP---DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNY 292 (388)
T ss_dssp TTSCCCEESCCCCT----TEEE---EEEEECT---TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECT
T ss_pred CCCCceEEeeeCCC----Cccc---ccceECC---CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecC
Confidence 98888877764211 0111 1134554 888898887776654 49999999998877653 221 0 1
Q ss_pred --EeeeecCCEEEEEEec-----CCCCCeEEEEEcCCCceeee
Q 008927 404 --DNITLGNDCLFVEGAS-----GVEPSSVAKVTLDDHKLKAV 439 (548)
Q Consensus 404 --~~~s~d~~~l~~~~ss-----~~~p~~l~~~d~~~~~~~~~ 439 (548)
..+++|++.|++.... ......||++|+++++.+++
T Consensus 293 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (388)
T 3pe7_A 293 DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRV 335 (388)
T ss_dssp TSSEEEEEECCC------------CCCCEEEEEETTTTEEEEE
T ss_pred CCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEe
Confidence 1247899988876543 14567899999988875433
No 22
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=7.1e-18 Score=188.27 Aligned_cols=315 Identities=11% Similarity=0.028 Sum_probs=198.3
Q ss_pred CcCCHHHHhcCC--CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEE
Q 008927 77 SPLTADVVSGAS--KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF 153 (548)
Q Consensus 77 spit~~~l~~~~--~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~ 153 (548)
.++|.|+++... ..-.+++++| | ++++.. .+|. |+.++..+ ++.++++...-.....+ ...+|+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~s~dg-~~~~~~----~d~~--i~~~~~~~-g~~~~~~~~~~~~~~~~---~~~~~SpD 70 (719)
T 1z68_A 2 RALTLKDILNGTFSYKTFFPNWISGQ-EYLHQS----ADNN--IVLYNIET-GQSYTILSNRTMKSVNA---SNYGLSPD 70 (719)
T ss_dssp BCCCHHHHHHTTTCCCCCCCEESSSS-EEEEEC----TTSC--EEEEESSS-CCEEEEECHHHHHTTTC---SEEEECTT
T ss_pred CcccHHHHhcCcccCCCCccEECCCC-eEEEEc----CCCC--EEEEEcCC-CcEEEEEccccccccce---eeEEECCC
Confidence 478999998752 2223689999 6 544433 1354 54444443 46677764310000001 12478999
Q ss_pred CCEEEEEeCC--------CCeEEEEeCCCCCCCc---eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 008927 154 GDTVIFSNYK--------DQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (548)
Q Consensus 154 ~~~i~F~~~~--------~~~Ly~~~~~~~~~~~---~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~ 222 (548)
|+.|+|.... ++.||+.++++ ++. ++|+. ....+.|||||++|+|+. + .+
T Consensus 71 g~~la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~l~~-------~~~~~~~SPDG~~la~~~-~---------~~ 131 (719)
T 1z68_A 71 RQFVYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNELPR-------PIQYLCWSPVGSKLAYVY-Q---------NN 131 (719)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCCS-------SBCCEEECSSTTCEEEEE-T---------TE
T ss_pred CCeEEEEecCceeEEeecceEEEEEECCC--CccccceecCc-------ccccceECCCCCEEEEEE-C---------Ce
Confidence 9999998752 46899999987 665 55542 256789999999999984 2 37
Q ss_pred EEEEECCCCCccCcEEeeecCC-------------------ceeeeEECCCCCEEEEEEecCCCCC--------------
Q 008927 223 IVAIALNGQNIQEPKVLVSGSD-------------------FYAFPRMDPRGERMAWIEWHHPNMP-------------- 269 (548)
Q Consensus 223 l~~idl~~g~~~~~~~L~~~~~-------------------~~~~p~~SPDGk~La~~~~~~~~~p-------------- 269 (548)
|+++|+.+++ .++|+.... ....++|||||++|+|.+.+....+
T Consensus 132 i~~~~~~~g~---~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~ 208 (719)
T 1z68_A 132 IYLKQRPGDP---PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPR 208 (719)
T ss_dssp EEEESSTTSC---CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCE
T ss_pred EEEEeCCCCC---cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcc
Confidence 9999999998 677753221 1147899999999999876532110
Q ss_pred ------------CCCceEEEEEecCCCceeeeEEE------cCCCCCcccCCcCceECcCCcEEEE-EeCCCCeeeEEEE
Q 008927 270 ------------WDKAELWVGYISENGDVYKRVCV------AGFDPTIVESPTEPKWSSKGELFFV-TDRKNGFWNLHKW 330 (548)
Q Consensus 270 ------------~~~~~L~v~~~~~~g~~~~~~~l------~~~~~~~~~~~~~~~wspDG~L~~~-sd~~~g~~~Ly~~ 330 (548)
.....|++.++++ ++......+ .+.. ..+..+.|||||++++. .++..+...|+++
T Consensus 209 ~~~~~yp~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~ 283 (719)
T 1z68_A 209 TINIPYPKAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSD----YYFSWLTWVTDERVCLQWLKRVQNVSVLSIC 283 (719)
T ss_dssp EEEEECCBTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSC----EEEEEEEESSSSEEEEEEEESSTTEEEEEEE
T ss_pred ceeecCCCCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCc----ceEEEeEEeCCCeEEEEEeccccCeEEEEEE
Confidence 1123788999874 431000112 1222 45678999999885554 4554566789999
Q ss_pred e----ccCCeeEeecccccccCCCccccc--CcceeeeeecCCCCEEEEE-EEeCCeEEEEEEECCCCceEeecCCCcee
Q 008927 331 I----ESNNEVLAIYSLDAEFSRPLWVFG--INSYEIIQSHGEKNLIACS-YRQNGRSYLGILDDFGHSLSLLDIPFTDI 403 (548)
Q Consensus 331 d----~~~g~~~~l~~~~~d~~~p~w~~~--~~~~~~~~~~~d~~~l~~~-~~~~g~~~L~~~dl~~g~~~~l~~~~~~~ 403 (548)
| +++++.+.++.... .....|+.. .....|+| |++.|++. ...++..+|+++|+++++.++|+.+...+
T Consensus 284 d~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~sp---dg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v 359 (719)
T 1z68_A 284 DFREDWQTWDCPKTQEHIE-ESRTGWAGGFFVSTPVFSY---DAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEA 359 (719)
T ss_dssp EECSSSSSEECCGGGEEEE-ECSSSCSSSSSCCCCEECT---TSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCE
T ss_pred cccCCCCCCceEEEEeccc-ccCCceEccccCCccEECC---CCCeEEEEEEccCCceEEEEEECCCCceEecccCceEE
Confidence 9 88887766652000 011122210 01234554 78877775 44678899999999998888887643333
Q ss_pred Eee--eecCCEEEEEEec---CCCCCeEEEEEcCCC
Q 008927 404 DNI--TLGNDCLFVEGAS---GVEPSSVAKVTLDDH 434 (548)
Q Consensus 404 ~~~--s~d~~~l~~~~ss---~~~p~~l~~~d~~~~ 434 (548)
..+ . +++.|+|.+.. ......||.++++++
T Consensus 360 ~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 360 INIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 322 5 88888888754 134568999988655
No 23
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=1.3e-16 Score=163.87 Aligned_cols=253 Identities=11% Similarity=0.088 Sum_probs=164.4
Q ss_pred CeeeEEECCEEEEEeCCC--CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 008927 147 GGAFRIFGDTVIFSNYKD--QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~~--~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~ 224 (548)
..+|+|||+.|+|....+ .+||++++++ ++.++++... ......+.|||||+.|+|++.+ .+||
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~--~~~~~l~~~~---~~~~~~~~~spdg~~l~~~~~~---------~~l~ 105 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLET--QQAVQLTEGK---GDNTFGGFISTDERAFFYVKNE---------LNLM 105 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTT--TEEEECCCSS---CBCTTTCEECTTSSEEEEEETT---------TEEE
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCC--CcEEEeecCC---CCccccceECCCCCEEEEEEcC---------CcEE
Confidence 457999999999997653 4899999987 7788888752 1112337899999999998533 2699
Q ss_pred EEECCCCCccCcEEeeecCCc-eee-------------------eEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCC
Q 008927 225 AIALNGQNIQEPKVLVSGSDF-YAF-------------------PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENG 284 (548)
Q Consensus 225 ~idl~~g~~~~~~~L~~~~~~-~~~-------------------p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g 284 (548)
++|+++++ .+++...... ... +.|||||++|++....... ....||+++++. |
T Consensus 106 ~~d~~~~~---~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~---~~~~l~~~d~~~-g 178 (396)
T 3c5m_A 106 KVDLETLE---EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN---PTCRLIKVDIET-G 178 (396)
T ss_dssp EEETTTCC---EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC---CCEEEEEEETTT-C
T ss_pred EEECCCCC---cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC---CcceEEEEECCC-C
Confidence 99999998 7777764322 111 3466666666544310001 246899999984 5
Q ss_pred ceeeeEEEcCCCCCcccCCcCceECc-CCc-EEEEEeCCCC--eeeEEEEeccCCeeEeecccccccCCCcccccCccee
Q 008927 285 DVYKRVCVAGFDPTIVESPTEPKWSS-KGE-LFFVTDRKNG--FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYE 360 (548)
Q Consensus 285 ~~~~~~~l~~~~~~~~~~~~~~~wsp-DG~-L~~~sd~~~g--~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~ 360 (548)
+. +.+.... ..+..+.|+| ||+ |+|+++.... ...||.+++++++.+.++... +.+. .....
T Consensus 179 ~~---~~~~~~~----~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~-----~~~~--~~~~~ 244 (396)
T 3c5m_A 179 EL---EVIHQDT----AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA-----EGES--CTHEF 244 (396)
T ss_dssp CE---EEEEEES----SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC-----TTEE--EEEEE
T ss_pred cE---EeeccCC----cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC-----CCcc--ccceE
Confidence 42 2333322 3467889999 888 8888753111 157999999888777776311 1111 11234
Q ss_pred eeeecCCCCEEEEEEEeCCeEE--EEEEECCCCceEeecC-CCceeEeeee-cCCEEEEEEec------------CCCCC
Q 008927 361 IIQSHGEKNLIACSYRQNGRSY--LGILDDFGHSLSLLDI-PFTDIDNITL-GNDCLFVEGAS------------GVEPS 424 (548)
Q Consensus 361 ~~~~~~d~~~l~~~~~~~g~~~--L~~~dl~~g~~~~l~~-~~~~~~~~s~-d~~~l~~~~ss------------~~~p~ 424 (548)
|+| |++.|++....++... |+++|+++++.+.+.. +... ..+++ |++.+++..+. .....
T Consensus 245 ~sp---dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 245 WIP---DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp ECT---TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ECC---CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 554 7888888877766544 9999999998877653 3222 23467 88865553321 11237
Q ss_pred eEEEEEcCCCceee
Q 008927 425 SVAKVTLDDHKLKA 438 (548)
Q Consensus 425 ~l~~~d~~~~~~~~ 438 (548)
.||++|+++++.++
T Consensus 321 ~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 321 FLYVLNTKAKSAQK 334 (396)
T ss_dssp EEEEEETTTTBCCE
T ss_pred cEEEEecccCceEE
Confidence 89999998887543
No 24
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.70 E-value=1.6e-15 Score=169.69 Aligned_cols=257 Identities=18% Similarity=0.199 Sum_probs=168.0
Q ss_pred eeeEEECCEEEEEeCCCC-----eEEEEeCCCCCCCceecCCCCCCCC---------------------ceecceeeCCC
Q 008927 148 GAFRIFGDTVIFSNYKDQ-----RLYKHSIDSKDSSPLPITPDYGEPL---------------------VSYADGIFDPR 201 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~-----~Ly~~~~~~~~~~~~~lT~~~~~~~---------------------~~~~~~~~SpD 201 (548)
.+|+|||+.|+|....++ .||++++++ ++.++++....... ..+..+.||||
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTT--CCEEEEECGGGTC--------------------CCEESCCCEECTT
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 478899999999987555 899999987 77777665311000 12567899999
Q ss_pred CCEEEEEEeccCCCCCCceeEEEEEECCCC---CccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEE
Q 008927 202 FNRYVTVREDRRQDALNSTTEIVAIALNGQ---NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVG 278 (548)
Q Consensus 202 G~~i~~v~~~~~~~~~~~~~~l~~idl~~g---~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~ 278 (548)
|+.|++... ..|+++|+.++ + .+.++........+.|||||++|+|.. ..+||+.
T Consensus 120 g~~l~~~~~----------~~i~~~d~~~~~~~~---~~~l~~~~~~~~~~~~SPDG~~la~~~---------~~~i~~~ 177 (741)
T 2ecf_A 120 AQRLLFPLG----------GELYLYDLKQEGKAA---VRQLTHGEGFATDAKLSPKGGFVSFIR---------GRNLWVI 177 (741)
T ss_dssp SSEEEEEET----------TEEEEEESSSCSTTS---CCBCCCSSSCEEEEEECTTSSEEEEEE---------TTEEEEE
T ss_pred CCEEEEEeC----------CcEEEEECCCCCcce---EEEcccCCcccccccCCCCCCEEEEEe---------CCcEEEE
Confidence 999999743 47999999998 7 677776656678899999999999986 1379999
Q ss_pred EecCCCceeeeEEEcCCCCC-c------------ccCCcCceECcCCc-EEEEEeCCC----------------------
Q 008927 279 YISENGDVYKRVCVAGFDPT-I------------VESPTEPKWSSKGE-LFFVTDRKN---------------------- 322 (548)
Q Consensus 279 ~~~~~g~~~~~~~l~~~~~~-~------------~~~~~~~~wspDG~-L~~~sd~~~---------------------- 322 (548)
++++ ++ .+.++..... . ...+..+.|||||+ |++.+....
T Consensus 178 d~~~-g~---~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 178 DLAS-GR---QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp ETTT-TE---EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred ecCC-CC---EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 9984 54 2333322100 0 00146789999999 888753211
Q ss_pred -------CeeeEEEEeccC-CeeEeeccc---ccccC-----------------------------------------CC
Q 008927 323 -------GFWNLHKWIESN-NEVLAIYSL---DAEFS-----------------------------------------RP 350 (548)
Q Consensus 323 -------g~~~Ly~~d~~~-g~~~~l~~~---~~d~~-----------------------------------------~p 350 (548)
+...|+++|+++ ++.+.+... ...+. ..
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 333 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP 333 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC
Confidence 234788889887 765444311 00000 00
Q ss_pred cccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCCceeE---eeeecCCEEEEEEecCC-CCCeE
Q 008927 351 LWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDID---NITLGNDCLFVEGASGV-EPSSV 426 (548)
Q Consensus 351 ~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~---~~s~d~~~l~~~~ss~~-~p~~l 426 (548)
.|........|+| |++ +++....++..+||.+|++++ .+.|+.....+. .++++++.|++.++... ....|
T Consensus 334 ~~~~~~~~~~~sp---dg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 334 TWVPLHNSLRFLD---DGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp SCCCCCSCCEECT---TSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred CcCCcCCceEECC---CCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 1111112345654 666 777777778889999998766 777775433332 35789998888776432 14568
Q ss_pred EEEEcCCCcee
Q 008927 427 AKVTLDDHKLK 437 (548)
Q Consensus 427 ~~~d~~~~~~~ 437 (548)
|.++.+++..+
T Consensus 409 ~~~~~~g~~~~ 419 (741)
T 2ecf_A 409 YAVPLQGGQPQ 419 (741)
T ss_dssp EEEETTCCCCE
T ss_pred EEEEcCCCCee
Confidence 88887655443
No 25
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.70 E-value=2.6e-15 Score=167.08 Aligned_cols=255 Identities=13% Similarity=0.119 Sum_probs=171.1
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|++| +.|+|.. ++.||++++.+ ++.++++... .....+.|||||+.|+|+. + ..|+++|+
T Consensus 88 ~~spd-~~~~~~~--~~~i~~~d~~~--~~~~~l~~~~----~~~~~~~~SpdG~~la~~~-~---------~~i~v~~~ 148 (706)
T 2z3z_A 88 LDAGR-GLVVLFT--QGGLVGFDMLA--RKVTYLFDTN----EETASLDFSPVGDRVAYVR-N---------HNLYIARG 148 (706)
T ss_dssp EETTT-TEEEEEE--TTEEEEEETTT--TEEEEEECCT----TCCTTCEECTTSSEEEEEE-T---------TEEEEEEC
T ss_pred EECCC-CeEEEEE--CCEEEEEECCC--CceEEccCCc----ccccCCcCCCCCCEEEEEE-C---------CeEEEEec
Confidence 56677 8899987 47899999987 7777777642 3467789999999999963 2 37999999
Q ss_pred CC-----CCccCcEEeeecCCc---------------eeeeEECCCCCEEEEEEecCCCC--------------------
Q 008927 229 NG-----QNIQEPKVLVSGSDF---------------YAFPRMDPRGERMAWIEWHHPNM-------------------- 268 (548)
Q Consensus 229 ~~-----g~~~~~~~L~~~~~~---------------~~~p~~SPDGk~La~~~~~~~~~-------------------- 268 (548)
.+ ++ .++++..... ...+.|||||++|++.+.+....
T Consensus 149 ~~~~~~~g~---~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y 225 (706)
T 2z3z_A 149 GKLGEGMSR---AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYY 225 (706)
T ss_dssp BCTTSCCCC---CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECC
T ss_pred CcccccCCC---cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeC
Confidence 98 87 6776644322 36789999999999987432210
Q ss_pred -----CCCCceEEEEEecCCCceeeeEEEc-CCCCCcccCCcCceECcCCc-EEEEE-eCCCCeeeEEEEeccCC-eeEe
Q 008927 269 -----PWDKAELWVGYISENGDVYKRVCVA-GFDPTIVESPTEPKWSSKGE-LFFVT-DRKNGFWNLHKWIESNN-EVLA 339 (548)
Q Consensus 269 -----p~~~~~L~v~~~~~~g~~~~~~~l~-~~~~~~~~~~~~~~wspDG~-L~~~s-d~~~g~~~Ly~~d~~~g-~~~~ 339 (548)
......|+++|+++ ++ .+.+. ..... ..+..+.|+|||+ |++.+ ++......|+++|++++ +.+.
T Consensus 226 ~~~g~~~~~~~l~~~d~~~-~~---~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 226 PMAGTPSHHVTVGIYHLAT-GK---TVYLQTGEPKE--KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp CBTTSCCCEEEEEEEETTT-TE---EEECCCCSCTT--CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE
T ss_pred CCCCCCCCeeEEEEEECCC-Cc---eEeeccCCCCc--eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE
Confidence 01235799999974 54 22222 11101 3456789999999 77754 44355678999999998 6665
Q ss_pred ecccccccCCCcccccCcceeeeeecCC--CCEEEEEEEeCCeEEEEEEECCCCceEeecCCCceeE---eeeecCCEEE
Q 008927 340 IYSLDAEFSRPLWVFGINSYEIIQSHGE--KNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDID---NITLGNDCLF 414 (548)
Q Consensus 340 l~~~~~d~~~p~w~~~~~~~~~~~~~~d--~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~---~~s~d~~~l~ 414 (548)
+.... ...|........|+ . ++.+++....++..+||.++.+++.++.|+.+...+. .++++++.|+
T Consensus 300 ~~~~~----~~~~~~~~~~~~~s----p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~ 371 (706)
T 2z3z_A 300 LFVET----DKHYVEPLHPLTFL----PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLY 371 (706)
T ss_dssp EEEEE----CSSCCCCCSCCEEC----TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEE
T ss_pred EEEcc----CCCeECccCCceee----cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEE
Confidence 54221 11222111223454 3 4556677777788999999987777888876433332 3478899988
Q ss_pred EEEecCC-CCCeEEEEEcCCCceeee
Q 008927 415 VEGASGV-EPSSVAKVTLDDHKLKAV 439 (548)
Q Consensus 415 ~~~ss~~-~p~~l~~~d~~~~~~~~~ 439 (548)
+..+... ....||.+|+++++.+.+
T Consensus 372 ~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 372 FESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEESSSCTTCBEEEEEETTCCCCEES
T ss_pred EEecCCCCceEEEEEEEcCCCCceec
Confidence 8775422 135899999887765433
No 26
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=9.2e-15 Score=142.67 Aligned_cols=232 Identities=12% Similarity=0.139 Sum_probs=158.5
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
..|+|++..|++.. ++.|+++++++. ++.+.+.... ....+..+.|+|||+.|++...+.. ....||.++
T Consensus 47 ~~~spdg~~l~~~~--~~~i~~~d~~~~-~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~-----~~~~l~~~~ 116 (297)
T 2ojh_A 47 PNWSPDGKYLLLNS--EGLLYRLSLAGD-PSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF-----GKSAIYLLP 116 (297)
T ss_dssp EEECTTSSEEEEEE--TTEEEEEESSSC-CSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT-----SSCEEEEEE
T ss_pred eEECCCCCEEEEEc--CCeEEEEeCCCC-CCceEecccc--ccccccceEECCCCCEEEEEEeCCC-----CcceEEEEE
Confidence 46888899999987 678999999751 3456665432 1234667899999999988753321 246899999
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+.++. .+.+..... ...+.|||||++|+|..... ....||.++++. ++ ...+.... ..+..+.
T Consensus 117 ~~~~~---~~~~~~~~~-~~~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~~-~~---~~~~~~~~----~~~~~~~ 179 (297)
T 2ojh_A 117 STGGT---PRLMTKNLP-SYWHGWSPDGKSFTYCGIRD-----QVFDIYSMDIDS-GV---ETRLTHGE----GRNDGPD 179 (297)
T ss_dssp TTCCC---CEECCSSSS-EEEEEECTTSSEEEEEEEET-----TEEEEEEEETTT-CC---EEECCCSS----SCEEEEE
T ss_pred CCCCc---eEEeecCCC-ccceEECCCCCEEEEEECCC-----CceEEEEEECCC-Cc---ceEcccCC----Cccccce
Confidence 99988 777765543 56679999999999876432 134788887763 43 33344332 4567799
Q ss_pred ECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC--------
Q 008927 308 WSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN-------- 378 (548)
Q Consensus 308 wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~-------- 378 (548)
|+|||+ |++.+.. .+...||.+++.+++.+.+....... ....|.| +++.|++....+
T Consensus 180 ~s~dg~~l~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~---------~~~~~s~---dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 180 YSPDGRWIYFNSSR-TGQMQIWRVRVDGSSVERITDSAYGD---------WFPHPSP---SGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp ECTTSSEEEEEECT-TSSCEEEEEETTSSCEEECCCCSEEE---------EEEEECT---TSSEEEEEEEETTCCSCCSS
T ss_pred ECCCCCEEEEEecC-CCCccEEEECCCCCCcEEEecCCccc---------CCeEECC---CCCEEEEEEcCCCCCccccc
Confidence 999999 7777765 67789999998777777665321111 1134554 788888777654
Q ss_pred CeEEEEEEECCCCceEeecC---CCceeEe--eeecCCEEEEEEec
Q 008927 379 GRSYLGILDDFGHSLSLLDI---PFTDIDN--ITLGNDCLFVEGAS 419 (548)
Q Consensus 379 g~~~L~~~dl~~g~~~~l~~---~~~~~~~--~s~d~~~l~~~~ss 419 (548)
+...|+++|+++++.+.+.. ....+.. ++++++.|++....
T Consensus 247 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred CceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 34789999999887765542 1122332 37888888877664
No 27
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=4.1e-15 Score=173.07 Aligned_cols=305 Identities=10% Similarity=0.002 Sum_probs=190.9
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC---
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD--- 164 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~--- 164 (548)
..+..+++|| |++|+|...++.+.+...|+.++..+ ++.++|+.....++++.+++...+|+|||+ |+|+...+
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~-g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~ 130 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN-GEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPF 130 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT-TEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSS
T ss_pred CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC-CCeEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCC
Confidence 5678899999 99999998765455778888887664 578888876555555666666778999998 88887543
Q ss_pred ---CeEEEEeCCCCCCCceecCCCCCCC----------------------------------------------Cceecc
Q 008927 165 ---QRLYKHSIDSKDSSPLPITPDYGEP----------------------------------------------LVSYAD 195 (548)
Q Consensus 165 ---~~Ly~~~~~~~~~~~~~lT~~~~~~----------------------------------------------~~~~~~ 195 (548)
.+||++++++ +++++|+...... ......
T Consensus 131 ~~~~~l~~~~~~~--g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~ 208 (1045)
T 1k32_A 131 SSMTCLYRVENDG--INFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSS 208 (1045)
T ss_dssp TTCCEEEEEEGGG--TEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEE
T ss_pred cccceEEEEECCC--CCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccc
Confidence 4799999987 6777776541000 000112
Q ss_pred eeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEec------C----
Q 008927 196 GIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWH------H---- 265 (548)
Q Consensus 196 ~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~------~---- 265 (548)
+.|++| .++|+++.. ....||.++++++. .++++.... +..+.|||||++|+|.... .
T Consensus 209 ~~~s~d--~l~~~~~~d------g~~~l~~~~~~g~~---~~~l~~~~~-~~~~~~SpDG~~la~~~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 209 PVIVGH--RIYFITDID------GFGQIYSTDLDGKD---LRKHTSFTD-YYPRHLNTDGRRILFSKGGSIYIFNPDTEK 276 (1045)
T ss_dssp EEEETT--EEEEEECTT------SSCEEEEEETTSCS---CEECCCCCS-SCEEEEEESSSCEEEEETTEEEEECTTTCC
T ss_pred eEEeCC--EEEEEEecc------CceEEEEEeCCCCc---ceEecCCCC-cceeeEcCCCCEEEEEeCCEEEEecCCceE
Confidence 345554 555654321 23578989988876 667765443 2345777777777664310 0
Q ss_pred ----CC------------------CCC---C--------CceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 266 ----PN------------------MPW---D--------KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 266 ----~~------------------~p~---~--------~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
.. +.| + ...|++.++. +++ .+.+.... . ..+..+.|+ ||
T Consensus 277 l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~-~~~---~~~~~~~~-~--~~~~~~~~s-dg 348 (1045)
T 1k32_A 277 IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVS-GTY---VLKVPEPL-R--IRYVRRGGD-TK 348 (1045)
T ss_dssp EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTT-SSB---EEECSCCS-C--EEEEEECSS-SE
T ss_pred eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCC-CCc---eEEccCCC-c--ceEEeeeEc-CC
Confidence 00 000 0 1234444443 122 22233222 1 145678999 99
Q ss_pred c-EEEEEeCCCCeeeEE-EEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCC
Q 008927 313 E-LFFVTDRKNGFWNLH-KWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (548)
Q Consensus 313 ~-L~~~sd~~~g~~~Ly-~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~ 390 (548)
+ |++.++. ..|| ++++++++.+.++...... ..+.|+| |++.|++... + ..|+++|+++
T Consensus 349 ~~l~~~s~~----~~l~~~~d~~~~~~~~l~~~~~~~---------~~~~~Sp---DG~~la~~~~-~--~~v~~~d~~t 409 (1045)
T 1k32_A 349 VAFIHGTRE----GDFLGIYDYRTGKAEKFEENLGNV---------FAMGVDR---NGKFAVVAND-R--FEIMTVDLET 409 (1045)
T ss_dssp EEEEEEETT----EEEEEEEETTTCCEEECCCCCCSE---------EEEEECT---TSSEEEEEET-T--SEEEEEETTT
T ss_pred CeEEEEECC----CceEEEEECCCCCceEecCCccce---------eeeEECC---CCCEEEEECC-C--CeEEEEECCC
Confidence 9 8888763 4788 8898888877776211111 1245655 7888876542 2 3788999999
Q ss_pred CceEeec-CCCceeE--eeeecCCEEEEEEecC------CCCCeEEEEEcCCCce
Q 008927 391 HSLSLLD-IPFTDID--NITLGNDCLFVEGASG------VEPSSVAKVTLDDHKL 436 (548)
Q Consensus 391 g~~~~l~-~~~~~~~--~~s~d~~~l~~~~ss~------~~p~~l~~~d~~~~~~ 436 (548)
|+.+.+. .....+. .+++|++.|++..... .....|+++|+++++.
T Consensus 410 g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 410 GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 9887765 3222233 2378999988877643 3456899999988764
No 28
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.67 E-value=1.2e-14 Score=141.95 Aligned_cols=229 Identities=10% Similarity=0.039 Sum_probs=161.2
Q ss_pred CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCC-CCccCcEEeeec
Q 008927 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQEPKVLVSG 242 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~-g~~~~~~~L~~~ 242 (548)
++.|+++++.+ ++.+.+... ...+..+.|||||+.|++.. + ..|+++|+++ ++ ...+..+
T Consensus 21 ~~~i~~~d~~~--~~~~~~~~~----~~~v~~~~~spdg~~l~~~~-~---------~~i~~~d~~~~~~---~~~~~~~ 81 (297)
T 2ojh_A 21 RSSIEIFNIRT--RKMRVVWQT----PELFEAPNWSPDGKYLLLNS-E---------GLLYRLSLAGDPS---PEKVDTG 81 (297)
T ss_dssp CEEEEEEETTT--TEEEEEEEE----SSCCEEEEECTTSSEEEEEE-T---------TEEEEEESSSCCS---CEECCCT
T ss_pred ceeEEEEeCCC--CceeeeccC----CcceEeeEECCCCCEEEEEc-C---------CeEEEEeCCCCCC---ceEeccc
Confidence 56899999987 666666543 23456788999999988853 2 3799999999 87 6777654
Q ss_pred C--CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEe
Q 008927 243 S--DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTD 319 (548)
Q Consensus 243 ~--~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd 319 (548)
. .....+.|||||++|++...+.. ....||.++++. +. .+.+... ..+..+.|+|||+ |++...
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~l~~~~~~~-~~---~~~~~~~-----~~~~~~~~spdg~~l~~~~~ 148 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEF----GKSAIYLLPSTG-GT---PRLMTKN-----LPSYWHGWSPDGKSFTYCGI 148 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTT----SSCEEEEEETTC-CC---CEECCSS-----SSEEEEEECTTSSEEEEEEE
T ss_pred cccccccceEECCCCCEEEEEEeCCC----CcceEEEEECCC-Cc---eEEeecC-----CCccceEECCCCCEEEEEEC
Confidence 4 34567899999999998774322 256899999873 43 3344432 2356679999999 777776
Q ss_pred CCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCC
Q 008927 320 RKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP 399 (548)
Q Consensus 320 ~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~ 399 (548)
. .+...||.+++.+++.+.+....... ..+.|.| +++.|++....++..+||.+++.+++.+.+...
T Consensus 149 ~-~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~s~---dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 215 (297)
T 2ojh_A 149 R-DQVFDIYSMDIDSGVETRLTHGEGRN---------DGPDYSP---DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS 215 (297)
T ss_dssp E-TTEEEEEEEETTTCCEEECCCSSSCE---------EEEEECT---TSSEEEEEECTTSSCEEEEEETTSSCEEECCCC
T ss_pred C-CCceEEEEEECCCCcceEcccCCCcc---------ccceECC---CCCEEEEEecCCCCccEEEECCCCCCcEEEecC
Confidence 6 67789999998888777665322111 1244554 777788776667888999999888888777654
Q ss_pred CceeEe--eeecCCEEEEEEecCC-------CCCeEEEEEcCCCcee
Q 008927 400 FTDIDN--ITLGNDCLFVEGASGV-------EPSSVAKVTLDDHKLK 437 (548)
Q Consensus 400 ~~~~~~--~s~d~~~l~~~~ss~~-------~p~~l~~~d~~~~~~~ 437 (548)
...+.. ++++++.|++...... ....|+++|+++++.+
T Consensus 216 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 216 AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 433333 3788898888776432 2357999999887754
No 29
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=5.1e-15 Score=163.39 Aligned_cols=251 Identities=13% Similarity=0.070 Sum_probs=164.4
Q ss_pred eEEECCEEEEEeCC---C--CeEEEEeCCCCCCCceecCCCCCCCCce-----ec--ceeeC--CCCCE-EEEEEeccCC
Q 008927 150 FRIFGDTVIFSNYK---D--QRLYKHSIDSKDSSPLPITPDYGEPLVS-----YA--DGIFD--PRFNR-YVTVREDRRQ 214 (548)
Q Consensus 150 ~~~~~~~i~F~~~~---~--~~Ly~~~~~~~~~~~~~lT~~~~~~~~~-----~~--~~~~S--pDG~~-i~~v~~~~~~ 214 (548)
.+++++.++|...+ + ..||.+ ..+ +++++||.... ..+ +. .+.|+ |||++ |+|....
T Consensus 29 ~~~s~~~~~~~~~~~~~~~~~~l~~~-~~~--~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~--- 100 (662)
T 3azo_A 29 VGAVGDEVWWVAPRPAEAGRATLVRR-RAD--GAEESALPAPW--NVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG--- 100 (662)
T ss_dssp EEEETTEEEEEEEETTTTTEEEEEEE-CTT--SCEEESSCTTC--CBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT---
T ss_pred eEEcCCeEEEEecCcccCCcEEEEEE-CCC--CCcceeCCCCc--cccccccccCCccceeeeecCCCeEEEEEECC---
Confidence 44568899998752 2 378888 444 67889987631 111 11 34455 99999 8886322
Q ss_pred CCCCceeEEEEEECC--C-CCccCcEEeee-----cCCceeeeEECCCCCEEEEEEecCCC-CC-CCCceEEEEEecCC-
Q 008927 215 DALNSTTEIVAIALN--G-QNIQEPKVLVS-----GSDFYAFPRMDPRGERMAWIEWHHPN-MP-WDKAELWVGYISEN- 283 (548)
Q Consensus 215 ~~~~~~~~l~~idl~--~-g~~~~~~~L~~-----~~~~~~~p~~SPDGk~La~~~~~~~~-~p-~~~~~L~v~~~~~~- 283 (548)
..+||.+++. + ++ .++|+. .......++|||||++|+|.+.++.. .+ ....+||++++++.
T Consensus 101 -----~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 101 -----DQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp -----TCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred -----CCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 2469999998 5 77 788876 23456789999999999998855211 01 12368999999741
Q ss_pred ----CceeeeEEEc-CCCCCcccCCcCceECcCCc-EEEEEeCCC----CeeeEEEEecc-CC---eeEeeccc-ccccC
Q 008927 284 ----GDVYKRVCVA-GFDPTIVESPTEPKWSSKGE-LFFVTDRKN----GFWNLHKWIES-NN---EVLAIYSL-DAEFS 348 (548)
Q Consensus 284 ----g~~~~~~~l~-~~~~~~~~~~~~~~wspDG~-L~~~sd~~~----g~~~Ly~~d~~-~g---~~~~l~~~-~~d~~ 348 (548)
++ .+.+. ... ..+..+.|||||+ |++.+.... +..+||+++++ +| +.+.|+.. .....
T Consensus 173 ~~~~~~---~~~l~~~~~----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~ 245 (662)
T 3azo_A 173 AADRSA---VRELSDDAH----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIA 245 (662)
T ss_dssp TTCGGG---SEESSCSCS----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEE
T ss_pred cccCCc---eeEEEecCC----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEc
Confidence 43 34555 433 4567899999999 888764422 33689999998 57 56666532 11111
Q ss_pred CCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCCcee---------Eeee-ecCCEEEEEEe
Q 008927 349 RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDI---------DNIT-LGNDCLFVEGA 418 (548)
Q Consensus 349 ~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~---------~~~s-~d~~~l~~~~s 418 (548)
...|+| |++ |++....++..+||++|+++++.++++.....+ ..+. .+++.+++..+
T Consensus 246 ---------~~~~sp---dg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 246 ---------QAEWAP---DGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp ---------EEEECT---TSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred ---------ceEECC---CCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 234554 666 888887778889999999888888776432111 1222 23555777665
Q ss_pred cCCCCCeEEEEEcCCCceee
Q 008927 419 SGVEPSSVAKVTLDDHKLKA 438 (548)
Q Consensus 419 s~~~p~~l~~~d~~~~~~~~ 438 (548)
. ....||++|+++++.+.
T Consensus 313 ~--~~~~l~~~d~~~~~~~~ 330 (662)
T 3azo_A 313 K--GAAVLGILDPESGELVD 330 (662)
T ss_dssp S--SSCEEEEEETTTTEEEE
T ss_pred c--CccEEEEEECCCCcEEE
Confidence 5 56789999988776543
No 30
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.66 E-value=9.8e-15 Score=145.19 Aligned_cols=260 Identities=9% Similarity=0.085 Sum_probs=180.7
Q ss_pred EEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC----------
Q 008927 95 AVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD---------- 164 (548)
Q Consensus 95 ~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~---------- 164 (548)
+.+ |+.|||.... +...|++++.+| .++++|+... + .-+.++|++|+|++..+
T Consensus 22 ~~~-g~~iy~~n~~----d~~~ly~~~~dg-~~~~~l~~~~--~---------~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 22 CES-DGEVFFSNTN----DNGRLYAMNIDG-SNIHKLSNDT--A---------MYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp EEE-TTEEEEEEGG----GTTEEEEEETTS-CSCEEEEEEE--E---------EEEEECSSEEEEEEECC------CCSS
T ss_pred EEe-CCEEEEEeCC----CCceEEEEcCCC-CCCEEccCCc--e---------eeEEEcCCEEEEEECCCCcccccceec
Confidence 334 9999998743 345799998885 4788888642 1 24678999999997653
Q ss_pred ---CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee
Q 008927 165 ---QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS 241 (548)
Q Consensus 165 ---~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~ 241 (548)
..||+++++| ++.++|+... ...++++|++|+|+..... ....||++++++.+ .++|+.
T Consensus 85 ~n~~~Iy~i~~dg--~~~~~l~~~~--------~~~~s~~g~~Iy~~~~~~~-----~~~~Iy~~~~dGs~---~~~lt~ 146 (302)
T 3s25_A 85 YDRNSLCRIKRNG--HGSTVLDPDP--------CIYASLIGNYIYYLHYDTQ-----TATSLYRIRIDGEE---KKKIKN 146 (302)
T ss_dssp CCSEEEEEEETTS--CCCEEEECSC--------EEEEEEETTEEEEEEESSS-----SCEEEEEEETTSCC---CEEEES
T ss_pred cCCCeEEEEeCCC--CcceEeecCC--------ccEEEEeCCEEEEEeecCC-----CCceEEEEECCCCC---eEEEeC
Confidence 4899999998 7788887752 1258889999999741111 23689999999988 888886
Q ss_pred cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeC
Q 008927 242 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDR 320 (548)
Q Consensus 242 ~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~ 320 (548)
... +.++|+|++|+|+.. ...+||++++++ +. .+.+..+. . ..|.| |+|+ |||+...
T Consensus 147 ~~~----~~~~~~g~~iy~t~~-------g~~~Iy~~~l~g-~~---~~~l~~~~----~--~~~~~-P~g~~iy~t~~~ 204 (302)
T 3s25_A 147 HYL----FTCNTSDRYFYYNNP-------KNGQLYRYDTAS-QS---EALFYDCN----C--YKPVV-LDDTNVYYMDVN 204 (302)
T ss_dssp SCC----CCSEEETTEEEEECT-------TTCCEEEEETTT-TE---EEEEECSC----E--EEEEE-EETTEEEEEEGG
T ss_pred CCc----eEeeEECCEEEEEeC-------CCceEEEEECCC-CC---EEEEeCCC----c--cceee-ecCCEEEEEEcC
Confidence 542 347889999998863 145799999974 42 23343322 1 23544 9998 7776543
Q ss_pred CCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCC
Q 008927 321 KNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPF 400 (548)
Q Consensus 321 ~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~ 400 (548)
.+ .+|++++++++..+.|+... . .| +.+ +++.|||..... ..+|+++++++...+.|...
T Consensus 205 -~~-~~I~~~~ldG~~~~~Lt~~~----~-~~------~~~-----~g~~Iy~~~~~~-~~~i~~~~~DG~~r~~l~~~- 264 (302)
T 3s25_A 205 -RD-NAIVHVNINNPNPVVLTEAN----I-EH------YNV-----YGSLIFYQRGGD-NPALCVVKNDGTGFKELAKG- 264 (302)
T ss_dssp -GT-TEEEEECSSSCCCEECSCSC----E-EE------EEE-----ETTEEEEEECSS-SCEEEEEETTSCCCEEEEES-
T ss_pred -CC-cEEEEEECCCCCeEEEeCCC----c-ce------EEE-----CCCEEEEEECCC-CcEEEEEECCCCccEEeeCC-
Confidence 34 78999999988888787421 1 22 233 688998875433 37899999988777777643
Q ss_pred ceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 401 TDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 401 ~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.+..++..+++|+|+-.. ...|+++++++..
T Consensus 265 -~~~~i~i~~d~Iy~td~~---~~~i~~~~~dGs~ 295 (302)
T 3s25_A 265 -EFCNINVTSQYVYFTDFV---SNKEYCTSTQNPD 295 (302)
T ss_dssp -CEEEEEECSSEEEEEETT---TCCEEEEESSSCC
T ss_pred -ccceEEEeCCEEEEEECC---CCeEEEEECCCCC
Confidence 234567788999987543 2349999876543
No 31
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.65 E-value=1.7e-14 Score=143.38 Aligned_cols=235 Identities=14% Similarity=0.163 Sum_probs=165.5
Q ss_pred CeeeEEECCEEEEEeCC-CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC-CC----Cce
Q 008927 147 GGAFRIFGDTVIFSNYK-DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD-AL----NST 220 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~-~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~-~~----~~~ 220 (548)
++-++.+|+.|+|.+.. +.+||+++.+| .++++|+.. . .. -++++|++|+|+....... .. ..+
T Consensus 18 ~g~~~~~g~~iy~~n~~d~~~ly~~~~dg--~~~~~l~~~----~--~~--~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~ 87 (302)
T 3s25_A 18 AGLFCESDGEVFFSNTNDNGRLYAMNIDG--SNIHKLSND----T--AM--YINADKNYVYYVRNNNQKITSQTFFSYDR 87 (302)
T ss_dssp TTCEEEETTEEEEEEGGGTTEEEEEETTS--CSCEEEEEE----E--EE--EEEECSSEEEEEEECC------CCSSCCS
T ss_pred ceEEEEeCCEEEEEeCCCCceEEEEcCCC--CCCEEccCC----c--ee--eEEEcCCEEEEEECCCCcccccceeccCC
Confidence 35688999999999754 46999999998 889999875 1 22 3678999999986543100 00 025
Q ss_pred eEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcc
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~ 300 (548)
..||++++++++ .++|...... .|+++|++|+|...... ....||.+++++.+ .+.|+...
T Consensus 88 ~~Iy~i~~dg~~---~~~l~~~~~~----~~s~~g~~Iy~~~~~~~----~~~~Iy~~~~dGs~----~~~lt~~~---- 148 (302)
T 3s25_A 88 NSLCRIKRNGHG---STVLDPDPCI----YASLIGNYIYYLHYDTQ----TATSLYRIRIDGEE----KKKIKNHY---- 148 (302)
T ss_dssp EEEEEEETTSCC---CEEEECSCEE----EEEEETTEEEEEEESSS----SCEEEEEEETTSCC----CEEEESSC----
T ss_pred CeEEEEeCCCCc---ceEeecCCcc----EEEEeCCEEEEEeecCC----CCceEEEEECCCCC----eEEEeCCC----
Confidence 789999999998 8888865432 68899999999863222 25789999997422 34455432
Q ss_pred cCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 301 ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 301 ~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
. +.|+++|+ |||.++ |..+||+++++++..+.|... +... .+.| +++.|+|+...++
T Consensus 149 ~----~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~~~~l~~~------~~~~------~~~P---~g~~iy~t~~~~~ 206 (302)
T 3s25_A 149 L----FTCNTSDRYFYYNNP---KNGQLYRYDTASQSEALFYDC------NCYK------PVVL---DDTNVYYMDVNRD 206 (302)
T ss_dssp C----CCSEEETTEEEEECT---TTCCEEEEETTTTEEEEEECS------CEEE------EEEE---ETTEEEEEEGGGT
T ss_pred c----eEeeEECCEEEEEeC---CCceEEEEECCCCCEEEEeCC------Cccc------eeee---cCCEEEEEEcCCC
Confidence 1 34678999 888865 456899999988887777532 1111 1223 7899998754444
Q ss_pred eEEEEEEECCCCceEeecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 008927 380 RSYLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 437 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~ 437 (548)
.+|++++++++..+.|+... +..+++++++|++..... ...|+++++++...+
T Consensus 207 -~~I~~~~ldG~~~~~Lt~~~--~~~~~~~g~~Iy~~~~~~--~~~i~~~~~DG~~r~ 259 (302)
T 3s25_A 207 -NAIVHVNINNPNPVVLTEAN--IEHYNVYGSLIFYQRGGD--NPALCVVKNDGTGFK 259 (302)
T ss_dssp -TEEEEECSSSCCCEECSCSC--EEEEEEETTEEEEEECSS--SCEEEEEETTSCCCE
T ss_pred -cEEEEEECCCCCeEEEeCCC--cceEEECCCEEEEEECCC--CcEEEEEECCCCccE
Confidence 78999999998888887532 334688999998765432 379999999876644
No 32
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=5e-14 Score=157.17 Aligned_cols=259 Identities=8% Similarity=-0.003 Sum_probs=166.0
Q ss_pred EEECCEEEEEeCCC----CeEEEEeCCCCCCCceecCCCC---CCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 008927 151 RIFGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 151 ~~~~~~i~F~~~~~----~~Ly~~~~~~~~~~~~~lT~~~---~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l 223 (548)
+++|++++|..... ..||+++..+ ++++.|+... ++....+..+.|||||++|+|...+... ....|
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~----~~~~i 153 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLE--GEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGS----DWVTI 153 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTT--SCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTC----SCEEE
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCC--CCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCC----ceEEE
Confidence 48999999986442 3789999876 6666553210 0012356788999999999998655321 24689
Q ss_pred EEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCC--------CCCCceEEEEEecCCCceeeeEEEcCC
Q 008927 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM--------PWDKAELWVGYISENGDVYKRVCVAGF 295 (548)
Q Consensus 224 ~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~--------p~~~~~L~v~~~~~~g~~~~~~~l~~~ 295 (548)
+++|+++|+ ...++.....+..+.|||||+.|+|.+.+.+.. .+...+||+.++.+ +.. +.+++...
T Consensus 154 ~v~d~~tg~---~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t-~~~-~~~~v~~~ 228 (710)
T 2xdw_A 154 KFMKVDGAK---ELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGT-DQS-EDILCAEF 228 (710)
T ss_dssp EEEETTTTE---EEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTS-CGG-GCEEEECC
T ss_pred EEEECCCCC---CCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCC-Ccc-cceEEecc
Confidence 999999998 555432222245789999999999988543310 02245799999974 432 12333222
Q ss_pred CCCcccCCcCceECcCCc-EEEEEeCCCC-eeeEEEEeccC------C--eeEeecccccccCCCcccccCcceeeeeec
Q 008927 296 DPTIVESPTEPKWSSKGE-LFFVTDRKNG-FWNLHKWIESN------N--EVLAIYSLDAEFSRPLWVFGINSYEIIQSH 365 (548)
Q Consensus 296 ~~~~~~~~~~~~wspDG~-L~~~sd~~~g-~~~Ly~~d~~~------g--~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~ 365 (548)
... ......+.|||||+ |++.+.+..+ ..+||++|+++ + +.+.|+.... .. .+.+.+
T Consensus 229 ~~~-~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~----~~------~~~~s~-- 295 (710)
T 2xdw_A 229 PDE-PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE----GE------YDYVTN-- 295 (710)
T ss_dssp TTC-TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS----SC------EEEEEE--
T ss_pred CCC-CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC----cE------EEEEec--
Confidence 100 02345789999999 8887765232 56899999976 5 4566653211 00 123444
Q ss_pred CCCCEEEEEEEeCC-eEEEEEEECCCCc---eEeecCCCc--eeEeee-ecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 366 GEKNLIACSYRQNG-RSYLGILDDFGHS---LSLLDIPFT--DIDNIT-LGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 366 ~d~~~l~~~~~~~g-~~~L~~~dl~~g~---~~~l~~~~~--~~~~~s-~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+++.|++..+.++ ..+|+++|++++. ++.|..+.. .+..+. .+++.+++.... .....|+++++.+++
T Consensus 296 -dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~-~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 296 -EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLH-DVKNTLQLHDLATGA 370 (710)
T ss_dssp -ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEE-TTEEEEEEEETTTCC
T ss_pred -cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEE-CCEEEEEEEECCCCC
Confidence 7889998876554 6789999998874 466654322 455553 347777777654 334679999985554
No 33
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=2.3e-14 Score=159.52 Aligned_cols=257 Identities=11% Similarity=-0.001 Sum_probs=166.8
Q ss_pred eEEECCEEEEEeCCC----CeEEEEeCCCCCCCceecCCCC---CCCCceecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 008927 150 FRIFGDTVIFSNYKD----QRLYKHSIDSKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~----~~Ly~~~~~~~~~~~~~lT~~~---~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~ 222 (548)
.+++|++|+|..... ..||+++.++ +++++|+... ++.......+.|||||++|+|....... ....
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~----~~~~ 148 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGES--GQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAA----DEAV 148 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTT--SCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTC----SCCE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCC--CCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCC----ceEE
Confidence 458999999987543 4799999877 7788887531 0011356788999999999998654321 2468
Q ss_pred EEEEECCCCCccCcE---EeeecCCceeeeEECCCCCEEEEEEecCCCC-----CCCCceEEEEEecCCCceeeeEEEcC
Q 008927 223 IVAIALNGQNIQEPK---VLVSGSDFYAFPRMDPRGERMAWIEWHHPNM-----PWDKAELWVGYISENGDVYKRVCVAG 294 (548)
Q Consensus 223 l~~idl~~g~~~~~~---~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~-----p~~~~~L~v~~~~~~g~~~~~~~l~~ 294 (548)
|+++|+++|+ .. .+. +. .+..+.|||||+.|+|.+.+.... .+...+||+.++.+ +.. +.+++..
T Consensus 149 i~v~dl~tg~---~~~~~~~~-~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t-~~~-~~~lv~~ 221 (695)
T 2bkl_A 149 LHVIDVDSGE---WSKVDVIE-GG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGT-EPS-KDTVVHE 221 (695)
T ss_dssp EEEEETTTCC---BCSSCCBS-CC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTS-CGG-GCEEEEC
T ss_pred EEEEECCCCC---CcCCcccC-cc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCC-Cch-hceEEEe
Confidence 9999999997 43 121 11 125789999999999988654310 01245799999974 331 1233433
Q ss_pred CCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEE
Q 008927 295 FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 373 (548)
Q Consensus 295 ~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~ 373 (548)
.... ...+..+.|||||+ |++.+....+..+||.++..+++.+.|+...... + ...+ + +++ |++
T Consensus 222 ~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~----~-----~~~~-~---~g~-l~~ 286 (695)
T 2bkl_A 222 RTGD-PTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK----Y-----EVHA-W---KDR-FYV 286 (695)
T ss_dssp CCCC-TTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC----E-----EEEE-E---TTE-EEE
T ss_pred cCCC-CEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce----E-----EEEe-c---CCc-EEE
Confidence 2100 02456789999999 8887765236778999988777777776432111 1 1122 2 677 777
Q ss_pred EEEeC-CeEEEEEEECCCCc---eEeecCC--CceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 374 SYRQN-GRSYLGILDDFGHS---LSLLDIP--FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 374 ~~~~~-g~~~L~~~dl~~g~---~~~l~~~--~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
..+.+ +...|+++|+++++ ++.|..+ ...+..++..++.+++.... +....|++++++++.
T Consensus 287 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~g~~ 353 (695)
T 2bkl_A 287 LTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLK-DATSEVRVATLKGKP 353 (695)
T ss_dssp EECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEE-TTEEEEEEEETTCCE
T ss_pred EECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEE-CCEEEEEEEeCCCCe
Confidence 76544 46789999998876 3555533 33455555457777777654 345688999976543
No 34
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=6.5e-15 Score=148.71 Aligned_cols=248 Identities=10% Similarity=0.044 Sum_probs=161.3
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCC-----
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK----- 163 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~----- 163 (548)
.+..+++|| |++|+|+..+.. ++...||.++..+ ++.++++..+. + ....|+|||+.|+|....
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~-~~~~~l~~~~~~~-g~~~~l~~~~~-----~---~~~~wspdg~~l~~~~~~~~~~~ 129 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEE-KKVSEIWVADLET-LSSKKILEAKN-----I---RSLEWNEDSRKLLIVGFKRREDE 129 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETT-TTEEEEEEEETTT-TEEEEEEEESE-----E---EEEEECTTSSEEEEEEECCCC--
T ss_pred cCCCeEECCCCCEEEEEEeccC-CCcceEEEEECCC-CceEEEEcCCC-----c---cceeECCCCCEEEEEEccCCCcC
Confidence 456799999 999999976531 3677898887653 46777775431 1 234788999999998632
Q ss_pred ---------------------CCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCc-e
Q 008927 164 ---------------------DQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNS-T 220 (548)
Q Consensus 164 ---------------------~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~-~ 220 (548)
..+||++++++ ++. ++|+. . ....+.||||| |+|+........... .
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~--~~~~~~l~~-~-----~~~~~~~spdg--~~~~~~~~~~~~~~~~~ 199 (347)
T 2gop_A 130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES--EEVIEEFEK-P-----RFSSGIWHRDK--IVVNVPHREIIPQYFKF 199 (347)
T ss_dssp -------CCCC---------CEEEEEEEETTT--TEEEEEEEE-E-----TTCEEEEETTE--EEEEEECCCSSCCSSCC
T ss_pred CcEEEcccceeecCcccccCccceEEEEECCC--CeEEeeecC-C-----CcccccCCCCe--EEEEEeccccccccccc
Confidence 35899999987 666 77764 1 34567899999 677654321111012 4
Q ss_pred eEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcc
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~ 300 (548)
.+||.+| +++ .+.|+.+ ..... +||||++|+|.............+||+++ . ++ .+.+.... .
T Consensus 200 ~~l~~~d--~~~---~~~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~--~~---~~~l~~~~-~-- 262 (347)
T 2gop_A 200 WDIYIWE--DGK---EEKMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD-G--KE---VMGILDEV-D-- 262 (347)
T ss_dssp EEEEEEE--TTE---EEEEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC-S--SC---EEESSTTC-C--
T ss_pred ccEEEeC--CCc---eEEeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC-C--Cc---eEeccccC-C--
Confidence 6899999 666 6777765 33333 49999999998744322222356899988 2 43 33344322 1
Q ss_pred cCCcC-ceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 301 ESPTE-PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 301 ~~~~~-~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
..+.. +.|+ || +++.... .+...|| ++ +|+.+.++.....+ ..+.+. . .++++....+
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~-~~~~~l~-~~--~g~~~~~~~~~~~v---------~~~~~s----~--~~~~~~~~~~ 321 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFE-EGSVNLY-IW--DGEIKPIAKGRHWI---------MGFDVD----E--IVVYLKETAT 321 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEE-TTEEEEE-EE--SSSEEEEECSSSEE---------EEEEES----S--SEEEEEECSS
T ss_pred cccCCccEEc-Cc-EEEEEec-CCcEEEE-Ec--CCceEEEecCCCeE---------Eeeeee----C--cEEEEEcCCC
Confidence 34554 8999 98 8888766 6788899 88 46666665321111 124453 3 5667766555
Q ss_pred eE-EEEEEECCCCceEeecC
Q 008927 380 RS-YLGILDDFGHSLSLLDI 398 (548)
Q Consensus 380 ~~-~L~~~dl~~g~~~~l~~ 398 (548)
.. +||.+| |+.++|+.
T Consensus 322 ~~~~l~~~~---g~~~~lt~ 338 (347)
T 2gop_A 322 RLRELFTWD---GEEKQLTD 338 (347)
T ss_dssp SCCEEEEES---SSEEECCC
T ss_pred ChHHheEeC---CcEEEecc
Confidence 54 899987 66777764
No 35
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.62 E-value=1.2e-13 Score=154.89 Aligned_cols=260 Identities=10% Similarity=0.027 Sum_probs=165.1
Q ss_pred eEEECCEEEEEeCCC----CeEEEEeCC---CCCCCceecCCCC---CCCCceecceeeCCCCCEEEEEEeccCCCCCCc
Q 008927 150 FRIFGDTVIFSNYKD----QRLYKHSID---SKDSSPLPITPDY---GEPLVSYADGIFDPRFNRYVTVREDRRQDALNS 219 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~----~~Ly~~~~~---~~~~~~~~lT~~~---~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~ 219 (548)
.+++|++++|..... ..||+++.. + ++.+.|+... ++.......+.|||||++|+|...+... .
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~----e 187 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVG--TKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGS----D 187 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTT--CCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTC----S
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCC--CCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCC----c
Confidence 458999999987443 478999986 5 6677653320 0011356678999999999998655321 2
Q ss_pred eeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCC------CCCCceEEEEEecCCCceeeeEEEc
Q 008927 220 TTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNM------PWDKAELWVGYISENGDVYKRVCVA 293 (548)
Q Consensus 220 ~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~------p~~~~~L~v~~~~~~g~~~~~~~l~ 293 (548)
...|+++|+++|+ ..........+..+.|||| +.|+|.+.+.+.. .....+||+.++.+ +.. +.+++.
T Consensus 188 ~~~i~v~dl~tg~---~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt-~~~-~~~lv~ 261 (741)
T 1yr2_A 188 WRTVKFVGVADGK---PLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGT-PQS-ADQPVF 261 (741)
T ss_dssp EEEEEEEETTTCC---EEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTS-CGG-GCEEEE
T ss_pred eEEEEEEECCCCC---CCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCC-Cch-hCEEEe
Confidence 4689999999998 4443221112357899999 9999987543210 00135799999864 321 123343
Q ss_pred CCCCCcccCCcCceECcCCc-EEEEEeCC-CCeeeEEEEeccCC--e-eEeecccccccCCCcccccCcceeeeeecCCC
Q 008927 294 GFDPTIVESPTEPKWSSKGE-LFFVTDRK-NGFWNLHKWIESNN--E-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEK 368 (548)
Q Consensus 294 ~~~~~~~~~~~~~~wspDG~-L~~~sd~~-~g~~~Ly~~d~~~g--~-~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~ 368 (548)
..... ...+..+.|||||+ |++.+.+. .+...||++|++++ + .+.|+..... .. +.+.+ ++
T Consensus 262 ~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~----~~------~~~~~---dg 327 (741)
T 1yr2_A 262 ATPEL-PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA----QW------DFVDG---VG 327 (741)
T ss_dssp CCTTC-TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS----CE------EEEEE---ET
T ss_pred ccCCC-CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc----eE------EEEec---cC
Confidence 32200 01356789999999 88877552 24668999999887 5 6667642110 11 11223 78
Q ss_pred CEEEEEEEeCC-eEEEEEEECCCC--ceEeecCC-CceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 369 NLIACSYRQNG-RSYLGILDDFGH--SLSLLDIP-FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 369 ~~l~~~~~~~g-~~~L~~~dl~~g--~~~~l~~~-~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+.|++..+.++ ..+|+++|++++ +++.|... ...+..++..++.+++.... .....|++++++++..
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~g~~~ 398 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIH-DAKSQVLAFDLDGKPA 398 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEE-TTEEEEEEEETTSCEE
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEE-CCEEEEEEEeCCCCce
Confidence 89998877554 678999999874 56666533 23355555557778777654 3456799999865543
No 36
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.59 E-value=2.4e-13 Score=158.27 Aligned_cols=268 Identities=11% Similarity=0.040 Sum_probs=185.3
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
..+..|.++ +++++|+... +|...||.++.++ +..++|+... .+ ....|++||+.|+|.. ++.||
T Consensus 204 ~~v~~~~~s-~d~l~~~~~~---dg~~~l~~~~~~g-~~~~~l~~~~-~~-------~~~~~SpDG~~la~~~--~~~i~ 268 (1045)
T 1k32_A 204 THVSSPVIV-GHRIYFITDI---DGFGQIYSTDLDG-KDLRKHTSFT-DY-------YPRHLNTDGRRILFSK--GGSIY 268 (1045)
T ss_dssp SCCEEEEEE-TTEEEEEECT---TSSCEEEEEETTS-CSCEECCCCC-SS-------CEEEEEESSSCEEEEE--TTEEE
T ss_pred CcccceEEe-CCEEEEEEec---cCceEEEEEeCCC-CcceEecCCC-Cc-------ceeeEcCCCCEEEEEe--CCEEE
Confidence 456678888 6688888643 5788899887653 4667777532 11 1247999999999986 77899
Q ss_pred EEeCCCCCCCceecCCCCCC-------CCceecceeeC-CCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 169 KHSIDSKDSSPLPITPDYGE-------PLVSYADGIFD-PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 169 ~~~~~~~~~~~~~lT~~~~~-------~~~~~~~~~~S-pDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
++++.+ .....++..... .......+.|| |||++|++.. + ..|+++++.+++ .+.+.
T Consensus 269 ~~d~~~--~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~---------~~i~~~~~~~~~---~~~~~ 333 (1045)
T 1k32_A 269 IFNPDT--EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-R---------GQAFIQDVSGTY---VLKVP 333 (1045)
T ss_dssp EECTTT--CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-T---------TEEEEECTTSSB---EEECS
T ss_pred EecCCc--eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-c---------CEEEEEcCCCCc---eEEcc
Confidence 999854 444444432100 00135578899 9999999975 1 369999999887 67776
Q ss_pred ecCC-ceeeeEECCCCCEEEEEEecCCCCCCCCceEE-EEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEE
Q 008927 241 SGSD-FYAFPRMDPRGERMAWIEWHHPNMPWDKAELW-VGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFV 317 (548)
Q Consensus 241 ~~~~-~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~-v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~ 317 (548)
.... ....+.|| ||++|+|.+. ...|| +++++. ++ .+.+.+.. ..+..+.|||||+ |++.
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~s~--------~~~l~~~~d~~~-~~---~~~l~~~~----~~~~~~~~SpDG~~la~~ 396 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHGTR--------EGDFLGIYDYRT-GK---AEKFEENL----GNVFAMGVDRNGKFAVVA 396 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEEET--------TEEEEEEEETTT-CC---EEECCCCC----CSEEEEEECTTSSEEEEE
T ss_pred CCCcceEEeeeEc-CCCeEEEEEC--------CCceEEEEECCC-CC---ceEecCCc----cceeeeEECCCCCEEEEE
Confidence 5555 56788999 9999998872 35799 999874 43 23344332 4567899999999 7666
Q ss_pred EeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC-------CeEEEEEEECCC
Q 008927 318 TDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFG 390 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~-------g~~~L~~~dl~~ 390 (548)
++. ..|+++|+++++.+.+..... .. ...+.|+| |++.|++..... ....|+++|+++
T Consensus 397 ~~~----~~v~~~d~~tg~~~~~~~~~~-----~~---v~~~~~Sp---DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 397 NDR----FEIMTVDLETGKPTVIERSRE-----AM---ITDFTISD---NSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp ETT----SEEEEEETTTCCEEEEEECSS-----SC---CCCEEECT---TSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCC----CeEEEEECCCCceEEeccCCC-----CC---ccceEECC---CCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 654 279999999998877763210 10 12245665 888888776543 457899999999
Q ss_pred CceEeecCCCceeE--eeeecCCEEEEEEe
Q 008927 391 HSLSLLDIPFTDID--NITLGNDCLFVEGA 418 (548)
Q Consensus 391 g~~~~l~~~~~~~~--~~s~d~~~l~~~~s 418 (548)
++.+.++....... .+++|++.|++...
T Consensus 462 g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 462 RKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred CcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 98777765433322 24789999888765
No 37
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.57 E-value=6.6e-14 Score=152.26 Aligned_cols=233 Identities=15% Similarity=0.093 Sum_probs=153.7
Q ss_pred eeeEEECCEEEEEeCCCC--eEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 148 GAFRIFGDTVIFSNYKDQ--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~--~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
-++++||++|+|.+..++ +||.+ ++ +++++||... ......+.|||| +|+|++..... .....||.
T Consensus 27 ~~~~~DG~~la~~s~~~g~~~lw~~--~~--g~~~~lt~~~---~~~~~~~~~spd--~~l~~~~~~~g---~~~~~l~~ 94 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSEGSVNAYLY--DG--GETVKLNREP---INSVLDPHYGVG--RVILVRDVSKG---AEQHALFK 94 (582)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEE--ET--TEEEECCSSC---CSEECEECTTCS--EEEEEEECSTT---SCCEEEEE
T ss_pred eecCCCCCeEEEEEccCCceeEEEE--cC--CCcEeeeccc---ccccccccCCCC--eEEEEeccCCC---CcceEEEE
Confidence 368899999999986554 68876 55 7889998762 134667899999 67787653111 13468999
Q ss_pred EEC--CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCC
Q 008927 226 IAL--NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (548)
Q Consensus 226 idl--~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~ 303 (548)
+++ .++. ..++..... ....|||||+.++|++... ..+.+.++++ |+ .+.+.... .
T Consensus 95 ~~~~~~g~~----~~l~~~~~~-~~~~~s~dg~~~~~~s~~~-------~~~~l~d~~~-g~---~~~l~~~~----~-- 152 (582)
T 3o4h_A 95 VNTSRPGEE----QRLEAVKPM-RILSGVDTGEAVVFTGATE-------DRVALYALDG-GG---LRELARLP----G-- 152 (582)
T ss_dssp EETTSTTCC----EECTTSCSB-EEEEEEECSSCEEEEEECS-------SCEEEEEEET-TE---EEEEEEES----S--
T ss_pred EeccCCCcc----ccccCCCCc-eeeeeCCCCCeEEEEecCC-------CCceEEEccC-Cc---EEEeecCC----C--
Confidence 999 6554 466544433 3568999999999887432 1233558874 54 33344322 2
Q ss_pred cCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEE
Q 008927 304 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 382 (548)
Q Consensus 304 ~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~ 382 (548)
..+.|||||+ |++.++...+...||++|+++++.+.|+....... ...|+| |++.|+ ....++..+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~---------~~~~Sp---DG~~l~-~~~~~~~~~ 219 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFS---------SASISP---GMKVTA-GLETAREAR 219 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEE---------EEEECT---TSCEEE-EEECSSCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccc---------cceECC---CCCEEE-EccCCCeeE
Confidence 6789999999 77776553555779999999999888874322111 244555 788777 666677789
Q ss_pred EEEEECCCCceEeecCCCceeE--e--------eeecCCEEEEEEecCCCCCeEEEEEc
Q 008927 383 LGILDDFGHSLSLLDIPFTDID--N--------ITLGNDCLFVEGASGVEPSSVAKVTL 431 (548)
Q Consensus 383 L~~~dl~~g~~~~l~~~~~~~~--~--------~s~d~~~l~~~~ss~~~p~~l~~~d~ 431 (548)
|+++|+++++.+.++.....+. . +++|+ .+++..+.. ..+.++++
T Consensus 220 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~---g~~~l~~~ 274 (582)
T 3o4h_A 220 LVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE---GRSAVFID 274 (582)
T ss_dssp EEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET---TEEEEEET
T ss_pred EEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC---CcEEEEEE
Confidence 9999999998873332221111 1 57788 677776543 24445554
No 38
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=9.5e-13 Score=146.38 Aligned_cols=285 Identities=10% Similarity=0.046 Sum_probs=180.0
Q ss_pred CCCCcCCHHHHhcC-CCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeE
Q 008927 74 SWKSPLTADVVSGA-SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFR 151 (548)
Q Consensus 74 ~w~spit~~~l~~~-~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~ 151 (548)
.|.--|.++.+... ...+..+.+|| |++++|...+.. .....|+.++..+ ++..+.+-. .+ .+++.+|+
T Consensus 113 ~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G-~~~~~i~v~dl~t-g~~~~~~~~--~~-----k~~~~~Ws 183 (693)
T 3iuj_A 113 PAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAG-SDWREIHLMDVES-KQPLETPLK--DV-----KFSGISWL 183 (693)
T ss_dssp CCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSS-CCEEEEEEEETTT-CSEEEEEEE--EE-----ESCCCEEE
T ss_pred CcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCC-CceEEEEEEECCC-CCCCccccC--Cc-----eeccEEEe
Confidence 35444555555443 13577889999 999999876521 2247888887663 344333211 01 13456899
Q ss_pred EECCEEEEEeCCC------------CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCc
Q 008927 152 IFGDTVIFSNYKD------------QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNS 219 (548)
Q Consensus 152 ~~~~~i~F~~~~~------------~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~ 219 (548)
|++.|+|+...+ .+||+.++.++..+.+.|..........+..+.|||||++|++...... .
T Consensus 184 -Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-----~ 257 (693)
T 3iuj_A 184 -GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST-----S 257 (693)
T ss_dssp -TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS-----S
T ss_pred -CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC-----C
Confidence 999999997542 3699999876222345565442000123556789999999988754432 2
Q ss_pred eeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCc
Q 008927 220 TTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (548)
Q Consensus 220 ~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~ 299 (548)
.++||++|+++++ .+.+.|+...+....+ |++||++|+|++.... ...+|++++++. +.....+.+....
T Consensus 258 ~~~i~~~d~~~~~-~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~----~~~~l~~~d~~~-~~~~~~~~l~~~~--- 327 (693)
T 3iuj_A 258 GNRLYVKDLSQEN-APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDA----PNRRLVTVDAAN-PGPAHWRDLIPER--- 327 (693)
T ss_dssp CCEEEEEETTSTT-CCCEEEECSSSSCEEE-EEEETTEEEEEECTTC----TTCEEEEEETTS-CCGGGCEEEECCC---
T ss_pred CcEEEEEECCCCC-CceEEEeCCCCceEEE-EeccCCEEEEEECCCC----CCCEEEEEeCCC-CCccccEEEecCC---
Confidence 3689999998873 1167777655544444 8899999998874321 257899999985 3321223444433
Q ss_pred ccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEe-
Q 008927 300 VESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ- 377 (548)
Q Consensus 300 ~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~- 377 (548)
..+. .|+++|+ |++...+ .+...|++++++++..+.|.... ...+. .+.+.+ +++.|++.+..
T Consensus 328 -~~~~--~~s~~g~~lv~~~~~-~g~~~l~~~d~~g~~~~~l~~p~-----~~~~~---~~~~~~---d~~~l~~~~ss~ 392 (693)
T 3iuj_A 328 -QQVL--TVHSGSGYLFAEYMV-DATARVEQFDYEGKRVREVALPG-----LGSVS---GFNGKH---DDPALYFGFENY 392 (693)
T ss_dssp -SSCE--EEEEETTEEEEEEEE-TTEEEEEEECTTSCEEEEECCSS-----SSEEE---ECCCCT---TCSCEEEEEECS
T ss_pred -CCEE--EEEEECCEEEEEEEE-CCeeEEEEEECCCCeeEEeecCC-----CceEE---eeecCC---CCCEEEEEecCC
Confidence 2232 8999999 7777766 78889999999877776664211 11111 112222 67778877653
Q ss_pred CCeEEEEEEECCCCceEeecC
Q 008927 378 NGRSYLGILDDFGHSLSLLDI 398 (548)
Q Consensus 378 ~g~~~L~~~dl~~g~~~~l~~ 398 (548)
.....||.+|+++++.+.|..
T Consensus 393 ~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 393 AQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp SSCCEEEEECTTTCCEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEEe
Confidence 344689999999988777653
No 39
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.54 E-value=1.1e-12 Score=147.23 Aligned_cols=249 Identities=7% Similarity=-0.004 Sum_probs=158.7
Q ss_pred EEECCEEEEEeCCCC----eEEEEeC---CCCCC--CceecCCCC---CCCC-ceecceeeC-CCCCEEEEEEeccCCCC
Q 008927 151 RIFGDTVIFSNYKDQ----RLYKHSI---DSKDS--SPLPITPDY---GEPL-VSYADGIFD-PRFNRYVTVREDRRQDA 216 (548)
Q Consensus 151 ~~~~~~i~F~~~~~~----~Ly~~~~---~~~~~--~~~~lT~~~---~~~~-~~~~~~~~S-pDG~~i~~v~~~~~~~~ 216 (548)
.++|+++||+....+ .||+.+. ++ + +.+.|.... ++.. .....+.|| |||++|+|+......
T Consensus 123 ~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~--~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~-- 198 (751)
T 2xe4_A 123 YVYGKYRYYTREVKGKPYKIYCRVFTDKEPG--DVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGN-- 198 (751)
T ss_dssp EEETTEEEEEEECTTCCSCEEEEEETTSCTT--CTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSS--
T ss_pred eEECCEEEEEEECCCCceeEEEEEcCCCCCC--CCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCC--
Confidence 368999999865432 4888886 44 4 444443210 0011 256678999 999999998654321
Q ss_pred CCceeEEEEEECCCC-CccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE-cC
Q 008927 217 LNSTTEIVAIALNGQ-NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AG 294 (548)
Q Consensus 217 ~~~~~~l~~idl~~g-~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l-~~ 294 (548)
....||++|+++| +.. ...+.. ....+.|||||++|+|+..+... ...+||+.++.+ +.. +.+++ ..
T Consensus 199 --~~~~l~v~dl~~g~~~l-~~~~~~---~~~~~~WspDg~~l~y~~~d~~~---~~~~v~~~~lgt-~~~-~~~lv~~~ 267 (751)
T 2xe4_A 199 --EVYTIEFKRISDPSQTI-ADKVSG---TNGEIVWGPDHTSLFYVTKDETL---RENKVWRHVMGK-LQS-EDVCLYEE 267 (751)
T ss_dssp --SCEEEEEEETTCTTCCC-CCCEEE---ECSCCEECSSTTEEEEEEECTTC---CEEEEEEEETTS-CGG-GCEEEEEC
T ss_pred --ceEEEEEEECCCCCEeC-CccccC---ceeeEEEecCCCEEEEEEECCCC---CCCEEEEEECCC-Cch-hcEEEEec
Confidence 2468999999998 510 111221 24578999999999999854321 235899999874 321 12333 22
Q ss_pred CCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCC--ee--EeecccccccCCCcccccCcceeeeeecCCCC
Q 008927 295 FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN--EV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKN 369 (548)
Q Consensus 295 ~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g--~~--~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~ 369 (548)
.+ . .....+.|||||+ |++.+.. .+..+||++|++++ +. +.|++.. ..+.|.. .|. +++
T Consensus 268 ~~-~--~~~~~~~~SpDg~~l~~~~~~-~~~~~l~~~d~~~~~~~~~~~~l~~~~---~~~~~s~-----~~~----~g~ 331 (751)
T 2xe4_A 268 HN-P--LFSAFMYKAADTNTLCIGSQS-PETAEVHLLDLRKGNAHNTLEIVRPRE---KGVRYDV-----QMH----GTS 331 (751)
T ss_dssp CC-T--TCEEEEEECTTSSEEEEEEEC-SSCEEEEEEESSSCTTCCCEEESSCCC---TTCCEEE-----EEE----TTT
T ss_pred CC-C--ceEEEEEECCCCCEEEEEecC-CCCceEEEEECCCCCCCceeEEeecCC---CCceEEE-----eee----eCC
Confidence 22 1 2345689999999 8887765 56778999999876 44 5565421 1223321 111 588
Q ss_pred EEEEEEEeC--CeEEEEEEECCC-CceEe-ec-CCCc-eeEeeeecCCEEEEEEecCCCCCeEEEEEc
Q 008927 370 LIACSYRQN--GRSYLGILDDFG-HSLSL-LD-IPFT-DIDNITLGNDCLFVEGASGVEPSSVAKVTL 431 (548)
Q Consensus 370 ~l~~~~~~~--g~~~L~~~dl~~-g~~~~-l~-~~~~-~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~ 431 (548)
.|++..+.+ +..+|+++|+++ ++++. |. .... .+..++..++.|++.... .....|+++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEE-TTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEe-CCEEEEEEEec
Confidence 999988865 678999999876 45555 43 3222 355666678888877654 44578999996
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=2.1e-11 Score=122.66 Aligned_cols=282 Identities=13% Similarity=0.059 Sum_probs=162.7
Q ss_pred CccCceEEcC-CCcEEEEEecCCC-CCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTE-AGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e-~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
..+..+.++| |+++|.......+ .....|+.++..+ ++.....+..... .+..|+++++.|++....++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~-------~~~~~s~dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVT-LEVTQAIHNDLKP-------FGATINNTTQTLWFGNTVNSA 112 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTT-CCEEEEEEESSCC-------CSEEEETTTTEEEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCC-CeEEEEEecCCCc-------ceEEECCCCCEEEEEecCCCE
Confidence 3456789999 7788666532110 0134566666542 2333322211111 134678888889998877889
Q ss_pred EEEEeCCCCCCCc-eecCCCCCC-----CCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 167 LYKHSIDSKDSSP-LPITPDYGE-----PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 167 Ly~~~~~~~~~~~-~~lT~~~~~-----~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
|+++++.+ ++. ..+...... .......+.|+|||++|++..... ...|+++|+++++ .....
T Consensus 113 v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~---~~~~~ 180 (353)
T 3vgz_A 113 VTAIDAKT--GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIK---LKTAI 180 (353)
T ss_dssp EEEEETTT--CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTE---EEEEE
T ss_pred EEEEeCCC--CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCc---eEEEe
Confidence 99999987 554 333221100 001134578999999876653221 2479999999887 44333
Q ss_pred e-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEe
Q 008927 241 S-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 319 (548)
Q Consensus 241 ~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd 319 (548)
. .........|||||++|+... . ..+|+++|+.. ++. ...+...............|+|||+.+|+++
T Consensus 181 ~~~~~~~~~~~~s~dg~~l~~~~-~-------~~~i~~~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 181 QNTGKMSTGLALDSEGKRLYTTN-A-------DGELITIDTAD-NKI--LSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp CCCCTTCCCCEEETTTTEEEEEC-T-------TSEEEEEETTT-TEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred cCCCCccceEEECCCCCEEEEEc-C-------CCeEEEEECCC-CeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 3 222345678999999886443 1 35799999874 542 2222211100002234578999999445555
Q ss_pred CCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecC
Q 008927 320 RKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDI 398 (548)
Q Consensus 320 ~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~ 398 (548)
. +...|+.+|+++++.....+. ..+ ....+.| +++.+++....+ ..|.++|+++++.. .+..
T Consensus 250 ~--~~~~v~~~d~~~~~~~~~~~~----~~~------~~~~~s~---dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 250 S--KAAEVLVVDTRNGNILAKVAA----PES------LAVLFNP---ARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp S--SSSEEEEEETTTCCEEEEEEC----SSC------CCEEEET---TTTEEEEEETTT--TEEEEEETTTTEEEEEEEC
T ss_pred C--CCCEEEEEECCCCcEEEEEEc----CCC------ceEEECC---CCCEEEEEECCC--CeEEEEECCCCeEEEEEec
Confidence 4 224688999988876543321 111 1244554 777776654233 46888999888754 3333
Q ss_pred CCceeEe--eeecCCEEEEEEec
Q 008927 399 PFTDIDN--ITLGNDCLFVEGAS 419 (548)
Q Consensus 399 ~~~~~~~--~s~d~~~l~~~~ss 419 (548)
+. .... ++++++.+++....
T Consensus 313 ~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 313 PT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CS-EEEEEEECTTSCEEEEEEEC
T ss_pred CC-CCCeEEEcCCCCEEEEEEcc
Confidence 32 2232 36788888776655
No 41
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=3.3e-11 Score=120.34 Aligned_cols=242 Identities=11% Similarity=0.068 Sum_probs=147.0
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCCCCCCCc--eecCCCCCCCCceecc-eeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP--LPITPDYGEPLVSYAD-GIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~--~~lT~~~~~~~~~~~~-~~~SpDG~~i~~v~~~~~~~~~~~~~~l~ 224 (548)
..|+++++.|++....++.|+++++.+ ++. +.++.. ..... +.|+|||+.|+ +..... ....|+
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~--~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~-~~~~~~-----~~~~i~ 111 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQL--EPPKVVAIQEG-----QSSMADVDITPDDQFAV-TVTGLN-----HPFNMQ 111 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSS--SSCEEEEEEEC-----SSCCCCEEECTTSSEEE-ECCCSS-----SSCEEE
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCC--CceeEEecccC-----CCCccceEECCCCCEEE-EecCCC-----CcccEE
Confidence 467778888888887788999999987 553 334333 12234 78999999987 422211 123899
Q ss_pred EEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeee--EEEcCCCCCcccC
Q 008927 225 AIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR--VCVAGFDPTIVES 302 (548)
Q Consensus 225 ~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~--~~l~~~~~~~~~~ 302 (548)
++|+++++ ...............|||||++|+..... +...|++++++.+|.+... ..+... ..
T Consensus 112 v~d~~~~~---~~~~~~~~~~~~~~~~spdg~~l~~~~~~------~~~~i~~~~~~~~g~~~~~~~~~~~~~-----~~ 177 (331)
T 3u4y_A 112 SYSFLKNK---FISTIPIPYDAVGIAISPNGNGLILIDRS------SANTVRRFKIDADGVLFDTGQEFISGG-----TR 177 (331)
T ss_dssp EEETTTTE---EEEEEECCTTEEEEEECTTSSCEEEEEET------TTTEEEEEEECTTCCEEEEEEEEECSS-----SS
T ss_pred EEECCCCC---eEEEEECCCCccceEECCCCCEEEEEecC------CCceEEEEEECCCCcEeecCCccccCC-----CC
Confidence 99999887 44443333334678999999987655422 1233888888765543221 222221 33
Q ss_pred CcCceECcCCcEEEEEeCCCCeeeEEEEeccCCee---EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 303 PTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 303 ~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~---~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
...+.|+|||+.+|+++...+ .|+++|+++++. ....+.. .. .....+.| +++.|++.. .+
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~~~~~~---~~------~~~~~~sp---dg~~l~v~~--~~ 241 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGN--SIGILETQNPENITLLNAVGTN---NL------PGTIVVSR---DGSTVYVLT--ES 241 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTT--EEEEEECSSTTSCEEEEEEECS---SC------CCCEEECT---TSSEEEEEC--SS
T ss_pred ccceEECCCCCEEEEEeCCCC--eEEEEECCCCcccceeeeccCC---CC------CceEEECC---CCCEEEEEE--cC
Confidence 567899999994444443133 577888877775 2222211 11 12245654 777776543 34
Q ss_pred eEEEEEEECCCCceEeecC---C----Cc-ee----EeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 380 RSYLGILDDFGHSLSLLDI---P----FT-DI----DNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~~l~~---~----~~-~~----~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
...|+++|+++++++.+.. . .. .. -.+++|++.+++.... ...|.++|+++..
T Consensus 242 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 242 TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI---SRELKVFTISGKV 306 (331)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT---TTEEEEEETTSCE
T ss_pred CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC---CCcEEEEEecCCc
Confidence 5668999999988744321 1 01 11 1347888887765532 3578889987654
No 42
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.46 E-value=5.5e-11 Score=120.69 Aligned_cols=276 Identities=10% Similarity=0.028 Sum_probs=151.6
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
.....+.++| |+.+|.......+.|+..+|.++.++ +..+.+......... ...++++++.|+..+..++.|
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~-g~~~~~~~~~~~~~~------p~~~~~dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEK-GTLHLLNTQKTMGAD------PCYLTTNGKNIVTANYSGGSI 122 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTT-TEEEEEEEEECSSSC------EEEEEECSSEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCC-CcEEEeeEeccCCCC------cEEEEECCCEEEEEECCCCEE
Confidence 4566789999 77787776432234677778776542 244444321100000 112445677788887777888
Q ss_pred EEEeCCCCCCCceecCC-----CCCCC-----CceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCC----C-
Q 008927 168 YKHSIDSKDSSPLPITP-----DYGEP-----LVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ----N- 232 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~-----~~~~~-----~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g----~- 232 (548)
.+++++.+ +....+.. ..... ......+.|+|||++|++..... ..-.+|.++..++ +
T Consensus 123 ~~~~~~~~-g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------~~v~v~~~~~~~~~~~~~~ 195 (361)
T 3scy_A 123 TVFPIGQD-GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT------DQIHKFNINPNANADNKEK 195 (361)
T ss_dssp EEEEBCTT-SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT------TEEEEEEECTTCCTTTCCC
T ss_pred EEEEeCCC-CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC------CEEEEEEEcCCCCcccccc
Confidence 88887642 33322211 00000 01123478999999877653211 1234444444443 1
Q ss_pred ccC---cEEee-ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 233 IQE---PKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 233 ~~~---~~~L~-~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
... ...+. ..........|||||++|+... . ....|++++++ +|++.....+...... ......+.|
T Consensus 196 l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-~------~~~~v~v~~~~-~g~~~~~~~~~~~~~~-~~~~~~i~~ 266 (361)
T 3scy_A 196 FLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN-E------IGGTVIAFRYA-DGMLDEIQTVAADTVN-AQGSGDIHL 266 (361)
T ss_dssp CEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-T------TTCEEEEEEEE-TTEEEEEEEEESCSSC-CCCEEEEEE
T ss_pred eeecccccceecCCCCCCeEEEEcCCCCEEEEEc-C------CCCeEEEEEec-CCceEEeEEEecCCCC-CCCcccEEE
Confidence 000 01122 1122245678999999876544 2 13578999988 4654333333221100 022347889
Q ss_pred CcCCcEEEEEeCC-CCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 309 SSKGELFFVTDRK-NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 309 spDG~L~~~sd~~-~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+|||+.+|++++. .+.-.+|.++.++++.+.+..... -..| ..+.++| +++.|++....++.-.+|.+|
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~------~~~~~sp---dg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP------RNFIITP---NGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC------CEEEECT---TSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC------ceEEECC---CCCEEEEEECCCCCEEEEEEE
Confidence 9999966666663 466667777766777655532111 0111 2355665 777777655456778888899
Q ss_pred CCCCceEeec
Q 008927 388 DFGHSLSLLD 397 (548)
Q Consensus 388 l~~g~~~~l~ 397 (548)
+++|+++.+.
T Consensus 337 ~~~g~~~~~~ 346 (361)
T 3scy_A 337 QATGLLTDIK 346 (361)
T ss_dssp TTTCCEEECS
T ss_pred CCCCcEeecc
Confidence 9999887664
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.41 E-value=8e-11 Score=120.46 Aligned_cols=237 Identities=11% Similarity=0.051 Sum_probs=153.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
.|+++++.|+++...++.|+++++.. ++....... ......+.|+|||+.|++...+ ...|+++|+
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~--~~~~~~~~~----~~~v~~~~~spdg~~l~~~~~~--------~~~v~v~d~ 103 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTAT--NNVIATVPA----GSSPQGVAVSPDGKQVYVTNMA--------SSTLSVIDT 103 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTT--TEEEEEEEC----SSSEEEEEECTTSSEEEEEETT--------TTEEEEEET
T ss_pred EECCCCCEEEEECCCCCeEEEEECCC--CeEEEEEEC----CCCccceEECCCCCEEEEEECC--------CCEEEEEEC
Confidence 57778888888877788999999976 544433222 1245677899999988775322 147999999
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+++ ...............|+|||++|++... ....|++.|+.. ++. ...+... .....+.|
T Consensus 104 ~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~-------~~~~v~~~d~~~-~~~--~~~~~~~-----~~~~~~~~ 165 (391)
T 1l0q_A 104 TSNT---VAGTVKTGKSPLGLALSPDGKKLYVTNN-------GDKTVSVINTVT-KAV--INTVSVG-----RSPKGIAV 165 (391)
T ss_dssp TTTE---EEEEEECSSSEEEEEECTTSSEEEEEET-------TTTEEEEEETTT-TEE--EEEEECC-----SSEEEEEE
T ss_pred CCCe---EEEEEeCCCCcceEEECCCCCEEEEEeC-------CCCEEEEEECCC-CcE--EEEEecC-----CCcceEEE
Confidence 9987 5444444445567899999998876552 245799999874 542 2333332 23467889
Q ss_pred CcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 309 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 309 spDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+|||+ |++.... ++ .|+.+|+.+++......... . .....+.| +++.|++.........|+++|
T Consensus 166 ~~dg~~l~~~~~~-~~--~v~~~d~~~~~~~~~~~~~~------~---~~~~~~~~---~g~~l~~~~~~~~~~~v~~~d 230 (391)
T 1l0q_A 166 TPDGTKVYVANFD-SM--SISVIDTVTNSVIDTVKVEA------A---PSGIAVNP---EGTKAYVTNVDKYFNTVSMID 230 (391)
T ss_dssp CTTSSEEEEEETT-TT--EEEEEETTTTEEEEEEECSS------E---EEEEEECT---TSSEEEEEEECSSCCEEEEEE
T ss_pred CCCCCEEEEEeCC-CC--EEEEEECCCCeEEEEEecCC------C---ccceEECC---CCCEEEEEecCcCCCcEEEEE
Confidence 99999 5444433 33 58888988887654442211 1 11234554 677777665433456788999
Q ss_pred CCCCceE-eecCCCceeEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 388 DFGHSLS-LLDIPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 388 l~~g~~~-~l~~~~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+.+++.. .+.... .+.. ++++++.+++..+. ...|+++|+.+++.
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~---d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 231 TGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSF---XNTVSVIDTATNTI 278 (391)
T ss_dssp TTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTEE
T ss_pred CCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCC---CCEEEEEECCCCcE
Confidence 9888654 333322 2333 36788877766533 36799999987764
No 44
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.39 E-value=1.8e-09 Score=108.29 Aligned_cols=243 Identities=10% Similarity=0.062 Sum_probs=148.4
Q ss_pred eeEEECCEEEEEeCC------CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 008927 149 AFRIFGDTVIFSNYK------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~------~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~ 222 (548)
+|+++++.|++.+.. ++.|+++++.+ ++....... ......+.|+|||+.+++.... ...
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~--~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~--------~~~ 112 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPVT--LEVTQAIHN----DLKPFGATINNTTQTLWFGNTV--------NSA 112 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTTT--CCEEEEEEE----SSCCCSEEEETTTTEEEEEETT--------TTE
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCCC--CeEEEEEec----CCCcceEEECCCCCEEEEEecC--------CCE
Confidence 567778888877644 56899999987 554333222 1234567899999987665322 147
Q ss_pred EEEEECCCCCccCcE-EeeecCC---------ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE
Q 008927 223 IVAIALNGQNIQEPK-VLVSGSD---------FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV 292 (548)
Q Consensus 223 l~~idl~~g~~~~~~-~L~~~~~---------~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l 292 (548)
|+++|+++++ .. .+..+.. ......|||||++|+...+.. ...|+++|++. ++. ...+
T Consensus 113 v~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~~-~~~--~~~~ 180 (353)
T 3vgz_A 113 VTAIDAKTGE---VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDGGN-IKL--KTAI 180 (353)
T ss_dssp EEEEETTTCC---EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEETTT-TEE--EEEE
T ss_pred EEEEeCCCCe---eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcCCC-Cce--EEEe
Confidence 9999999987 43 3332211 134568999999876554321 35799999874 542 2334
Q ss_pred cCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEE
Q 008927 293 AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIA 372 (548)
Q Consensus 293 ~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~ 372 (548)
.... .....+.|+|||+.+|+++. .+ .|+.+|+.+++.......... +...+ .....+.| +++.|+
T Consensus 181 ~~~~----~~~~~~~~s~dg~~l~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~-~~~~~---~~~~~~s~---dg~~l~ 246 (353)
T 3vgz_A 181 QNTG----KMSTGLALDSEGKRLYTTNA-DG--ELITIDTADNKILSRKKLLDD-GKEHF---FINISLDT---ARQRAF 246 (353)
T ss_dssp CCCC----TTCCCCEEETTTTEEEEECT-TS--EEEEEETTTTEEEEEEECCCS-SSCCC---EEEEEEET---TTTEEE
T ss_pred cCCC----CccceEEECCCCCEEEEEcC-CC--eEEEEECCCCeEEEEEEcCCC-CCCcc---cceEEECC---CCCEEE
Confidence 3221 34667899999995555554 33 688899988876543321100 00011 11234554 777776
Q ss_pred EEEEeCCeEEEEEEECCCCceE-eecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 373 CSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 373 ~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+.. .+...|+++|+++++.. .+..+...--.++++++.+++.... ...|+++|+.+++.
T Consensus 247 ~~~--~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 247 ITD--SKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQ---AGKVSVIDAKSYKV 306 (353)
T ss_dssp EEE--SSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETT---TTEEEEEETTTTEE
T ss_pred EEe--CCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECC---CCeEEEEECCCCeE
Confidence 553 33457889999888754 3333322112337788877665432 36899999887763
No 45
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.34 E-value=1e-10 Score=117.94 Aligned_cols=256 Identities=11% Similarity=0.099 Sum_probs=137.4
Q ss_pred eeeEEECCEEEEEeCC--CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 148 GAFRIFGDTVIFSNYK--DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~--~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
.+|+++|+ |++.+.. ++.|+++++++ ++.+.++.... .......+.|+|||+.|++..... ..|.+
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~--g~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v 112 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDG--QTAHKLNTVVA-PGTPPAYVAVDEARQLVYSANYHK--------GTAEV 112 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEET--TEEEEEEEEEE-ESCCCSEEEEETTTTEEEEEETTT--------TEEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecC--CcEEEeeeeec-CCCCCEEEEECCCCCEEEEEeCCC--------CEEEE
Confidence 35677766 7777643 57899998876 55555543100 012345678999999877653221 34666
Q ss_pred EECC-CCCccCcEEeee----cC--------CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE
Q 008927 226 IALN-GQNIQEPKVLVS----GS--------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV 292 (548)
Q Consensus 226 idl~-~g~~~~~~~L~~----~~--------~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l 292 (548)
++++ ++. .+.+.. +. .......|||||+ |+ +... ....|++++++.+|++.....+
T Consensus 113 ~~~~~~g~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~-v~~~------~~~~v~~~~~~~~g~~~~~~~~ 181 (347)
T 3hfq_A 113 MKIAADGA---LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LA-VIDL------GSDKVYVYNVSDAGQLSEQSVL 181 (347)
T ss_dssp EEECTTSC---EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EE-EEET------TTTEEEEEEECTTSCEEEEEEE
T ss_pred EEeCCCCC---eeecceeecCCCCCCccccCCCceEEEECCCCc-EE-EEeC------CCCEEEEEEECCCCcEEEeeeE
Confidence 6664 344 333321 11 1234578999999 54 4422 2357999999855654322222
Q ss_pred cCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeeccc---ccccCCCcccccCcceeeeeecCCC
Q 008927 293 AGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSL---DAEFSRPLWVFGINSYEIIQSHGEK 368 (548)
Q Consensus 293 ~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~---~~d~~~p~w~~~~~~~~~~~~~~d~ 368 (548)
.... . .....+.|+|||+ ||+.... .+...+|.++..+++.+.+... ...+.... ......++| |+
T Consensus 182 ~~~~-g--~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~i~~sp---dG 251 (347)
T 3hfq_A 182 TMEA-G--FGPRHLVFSPDGQYAFLAGEL-SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN---GAAAIRLSH---DG 251 (347)
T ss_dssp ECCT-T--CCEEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC---EEEEEEECT---TS
T ss_pred EcCC-C--CCCceEEECCCCCEEEEEeCC-CCEEEEEEecCCCCceEEeeeeeecCCCCCCCC---cceeEEECC---CC
Confidence 2211 1 2344579999999 5554444 6666677776656765443211 11100001 112245654 77
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCceEeec---CCCceeEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCceee
Q 008927 369 NLIACSYRQNGRSYLGILDDFGHSLSLLD---IPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKA 438 (548)
Q Consensus 369 ~~l~~~~~~~g~~~L~~~dl~~g~~~~l~---~~~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~ 438 (548)
+.||++...++.-.+|.++. +|..+.+. ........ +++|++.|++... ....-.+|.+|.++++++.
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ-NTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET-TTTEEEEEEECTTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc-CCCcEEEEEEeCCCCeEEe
Confidence 77876655455545554442 34444332 21112222 3778887765543 2333455666777777543
No 46
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.30 E-value=3.2e-10 Score=112.82 Aligned_cols=246 Identities=11% Similarity=-0.002 Sum_probs=146.1
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCC-CCceecceeeCCCCCEEEEEEeccCCCCCC---ceeE
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGE-PLVSYADGIFDPRFNRYVTVREDRRQDALN---STTE 222 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~-~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~---~~~~ 222 (548)
.+|+++++.|++....++.|+++++.+ ++.. .+...... .......+.|+|||+.|++........+.. ....
T Consensus 39 ~~~s~dg~~l~v~~~~~~~v~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 1pby_B 39 PMVAPGGRIAYATVNKSESLVKIDLVT--GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116 (337)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT--CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred eEEcCCCCEEEEEeCCCCeEEEEECCC--CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCce
Confidence 467778888888887778999999986 5543 34322100 001345678999999887763211000000 1268
Q ss_pred EEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccC
Q 008927 223 IVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 302 (548)
Q Consensus 223 l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~ 302 (548)
|+++|+.+++ ...............|||||++|++. + ..|++++++. ++. ...+... ..
T Consensus 117 i~v~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~--------~~i~~~d~~~-~~~--~~~~~~~-----~~ 175 (337)
T 1pby_B 117 VALYDAETLS---RRKAFEAPRQITMLAWARDGSKLYGL--G--------RDLHVMDPEA-GTL--VEDKPIQ-----SW 175 (337)
T ss_dssp EEEEETTTTE---EEEEEECCSSCCCEEECTTSSCEEEE--S--------SSEEEEETTT-TEE--EEEECST-----TT
T ss_pred EEEEECCCCc---EEEEEeCCCCcceeEECCCCCEEEEe--C--------CeEEEEECCC-CcE--eeeeecc-----cc
Confidence 9999999886 44333333334566899999988754 1 3599999974 542 2233321 11
Q ss_pred CcCceECcCCc-EEEEEeCCCCe---------------------eeEEEEeccCCeeEeecccccccCCCcccccCccee
Q 008927 303 PTEPKWSSKGE-LFFVTDRKNGF---------------------WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYE 360 (548)
Q Consensus 303 ~~~~~wspDG~-L~~~sd~~~g~---------------------~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~ 360 (548)
.....|+|||+ +++.... .+. +.|+.+|+++++...+...... . ......
T Consensus 176 ~~~~~~s~dg~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~------~~~~~~ 247 (337)
T 1pby_B 176 EAETYAQPDVLAVWNQHES-SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD-V------FYFSTA 247 (337)
T ss_dssp TTTTBCCCBCCCCCCCCTT-TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS-S------CEEEEE
T ss_pred CCCceeCCCccEEeeeccC-CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC-C------ceeeEE
Confidence 23458999999 6544332 222 1688999988876533211000 0 011244
Q ss_pred eeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCcee-EeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 361 IIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDI-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 361 ~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~-~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+.| +++.|++. ...|+++|+++++.. .+..+.... -.++++++.+++. . ....|+++|+++++.
T Consensus 248 ~s~---dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~---~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 248 VNP---AKTRAFGA-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-G---ALGDLAAYDAETLEK 313 (337)
T ss_dssp ECT---TSSEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-S---BSSEEEEEETTTCCE
T ss_pred ECC---CCCEEEEe-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-c---CCCcEEEEECcCCcE
Confidence 554 77777655 257899999888654 333322111 1236788877664 2 247899999987764
No 47
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.29 E-value=6e-10 Score=111.13 Aligned_cols=259 Identities=11% Similarity=0.055 Sum_probs=135.2
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCC--CCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSID--SKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~--~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
.+|+++++.|++....++.|.+++++ + ++.+.+..... ......+.|+|||+.|++..... ..|.+
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~--------~~i~~ 110 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDD--GALTFAAESAL--PGSLTHISTDHQGQFVFVGSYNA--------GNVSV 110 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTT--CCEEEEEEEEC--SSCCSEEEECTTSSEEEEEETTT--------TEEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCC--Cceeecccccc--CCCCcEEEEcCCCCEEEEEecCC--------CeEEE
Confidence 46778888888888665767665554 4 55554432210 11345678999999877654321 35677
Q ss_pred EECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeE--EEcCCCCCcccCC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV--CVAGFDPTIVESP 303 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~--~l~~~~~~~~~~~ 303 (548)
+|+..+...................|||||++|+..... ...|++++++.++++.... .+.... . ...
T Consensus 111 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~-~--~~~ 180 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-------QDRICLFTVSDDGHLVAQDPAEVTTVE-G--AGP 180 (343)
T ss_dssp EEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEEEEECST-T--CCE
T ss_pred EECCCCccccccccccCCCCceEEEECCCCCEEEEecCC-------CCEEEEEEecCCCceeeecccccccCC-C--CCc
Confidence 777433210022222333335567899999988644311 3579999998546532222 222211 1 234
Q ss_pred cCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecc---cccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 304 TEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYS---LDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 304 ~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~---~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
..+.|+|||+ |++.... .+.-.+|.++..+++.+.+.. ....+....+. ....+.| +++.|++....++
T Consensus 181 ~~~~~~pdg~~l~~~~~~-~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~i~~s~---dg~~l~v~~~~~~ 253 (343)
T 1ri6_A 181 RHMVFHPNEQYAYCVNEL-NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWA---ADIHITP---DGRHLYACDRTAS 253 (343)
T ss_dssp EEEEECTTSSEEEEEETT-TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCE---EEEEECT---TSSEEEEEETTTT
T ss_pred ceEEECCCCCEEEEEeCC-CCEEEEEEecCCCCcEEEEeeccccCccccccCCc---cceEECC---CCCEEEEEecCCC
Confidence 5578999999 5554433 554444444434565432221 11111111111 1245654 7777765543445
Q ss_pred eEEEEEEECCCCceEeec---CCCceeEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 008927 380 RSYLGILDDFGHSLSLLD---IPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 437 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~~l~---~~~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~ 437 (548)
.-.+|.++.++++.+.+. .... ... ++++++.+++... ....-.+|.+|.++++.+
T Consensus 254 ~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 254 LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQ-KSHHISVYEIVGEQGLLH 314 (343)
T ss_dssp EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECT-TTCEEEEEEEETTTTEEE
T ss_pred EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecC-CCCeEEEEEEcCCCceee
Confidence 444444433355555442 2221 322 3677777665442 233345566677777653
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.28 E-value=1.9e-09 Score=107.43 Aligned_cols=243 Identities=10% Similarity=-0.013 Sum_probs=140.5
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
|..+++.++.+...++.|+++++.+ ++........ .... .+.|+|||+.|++.... ...|+++|+.
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~~--------~~~i~~~d~~ 70 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDT--LEILNQITLG---YDFV-DTAITSDCSNVVVTSDF--------CQTLVQIETQ 70 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTT--CCEEEEEECC---CCEE-EEEECSSSCEEEEEEST--------TCEEEEEECS
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcc--cceeeeEEcc---CCcc-eEEEcCCCCEEEEEeCC--------CCeEEEEECC
Confidence 3345567777777778999999987 5554433321 1223 77899999987665432 1479999999
Q ss_pred CCCccCc-EEeeecCCceee-eEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 230 GQNIQEP-KVLVSGSDFYAF-PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 230 ~g~~~~~-~~L~~~~~~~~~-p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+++ . ............ ..|||||++|+ +.... + ....|++++++. ++. ...+... .....+.
T Consensus 71 ~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~-~---~~~~i~v~d~~~-~~~--~~~~~~~-----~~~~~~~ 134 (331)
T 3u4y_A 71 LEP---PKVVAIQEGQSSMADVDITPDDQFAV-TVTGL-N---HPFNMQSYSFLK-NKF--ISTIPIP-----YDAVGIA 134 (331)
T ss_dssp SSS---CEEEEEEECSSCCCCEEECTTSSEEE-ECCCS-S---SSCEEEEEETTT-TEE--EEEEECC-----TTEEEEE
T ss_pred CCc---eeEEecccCCCCccceEECCCCCEEE-EecCC-C---CcccEEEEECCC-CCe--EEEEECC-----CCccceE
Confidence 987 5 333333233344 78999999987 44211 0 012899999974 542 2233332 2346789
Q ss_pred ECcCCc-EEEEEeCCCCe-eeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 308 WSSKGE-LFFVTDRKNGF-WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 308 wspDG~-L~~~sd~~~g~-~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
|+|||+ ||+.... .+. -.+|.++. ++............+. +.....+.| +++.|++.... ...|++
T Consensus 135 ~spdg~~l~~~~~~-~~~~i~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~~~sp---dg~~l~v~~~~--~~~v~v 202 (331)
T 3u4y_A 135 ISPNGNGLILIDRS-SANTVRRFKIDA-DGVLFDTGQEFISGGT-----RPFNITFTP---DGNFAFVANLI--GNSIGI 202 (331)
T ss_dssp ECTTSSCEEEEEET-TTTEEEEEEECT-TCCEEEEEEEEECSSS-----SEEEEEECT---TSSEEEEEETT--TTEEEE
T ss_pred ECCCCCEEEEEecC-CCceEEEEEECC-CCcEeecCCccccCCC-----CccceEECC---CCCEEEEEeCC--CCeEEE
Confidence 999999 5554433 444 55666553 2333211100000000 112345654 77777765433 346788
Q ss_pred EECCCCce----EeecCCCceeE--eeeecCCEEEEEEecCCCCCeEEEEEcCCCceee
Q 008927 386 LDDFGHSL----SLLDIPFTDID--NITLGNDCLFVEGASGVEPSSVAKVTLDDHKLKA 438 (548)
Q Consensus 386 ~dl~~g~~----~~l~~~~~~~~--~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~~ 438 (548)
+|+++++. ..+..+ .... .+++|++.+++... ....|+++|+++++.+.
T Consensus 203 ~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~---~~~~i~~~d~~~~~~~~ 257 (331)
T 3u4y_A 203 LETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE---STVDVFNFNQLSGTLSF 257 (331)
T ss_dssp EECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS---SEEEEEEEETTTTEEEE
T ss_pred EECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc---CCCEEEEEECCCCceee
Confidence 89888874 333332 1222 23778887766543 23569999998887543
No 49
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.27 E-value=1.5e-09 Score=110.97 Aligned_cols=231 Identities=12% Similarity=0.100 Sum_probs=146.1
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.++.+...++.|++.+++. ++........ .....+.|+|||+.|++.... ...|.++|+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~--~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~--------d~~i~v~d~~~~~--- 65 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTS--NKVTATIPVG----SNPMGAVISPDGTKVYVANAH--------SNDVSIIDTATNN--- 65 (391)
T ss_dssp EEEEEETTTTEEEEEETTT--TEEEEEEECS----SSEEEEEECTTSSEEEEEEGG--------GTEEEEEETTTTE---
T ss_pred EEEEEcCCCCEEEEEECCC--CeEEEEeecC----CCcceEEECCCCCEEEEECCC--------CCeEEEEECCCCe---
Confidence 5666777788999999986 5443332221 234567899999988665322 1479999999987
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-E
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-L 314 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L 314 (548)
...............|||||++|++... ....|++.|++. ++. ...+... ..+..+.|+|||+ |
T Consensus 66 ~~~~~~~~~~v~~~~~spdg~~l~~~~~-------~~~~v~v~d~~~-~~~--~~~~~~~-----~~~~~~~~s~dg~~l 130 (391)
T 1l0q_A 66 VIATVPAGSSPQGVAVSPDGKQVYVTNM-------ASSTLSVIDTTS-NTV--AGTVKTG-----KSPLGLALSPDGKKL 130 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSSEEEEEET-------TTTEEEEEETTT-TEE--EEEEECS-----SSEEEEEECTTSSEE
T ss_pred EEEEEECCCCccceEECCCCCEEEEEEC-------CCCEEEEEECCC-CeE--EEEEeCC-----CCcceEEECCCCCEE
Confidence 5444444445667889999999876542 135799999984 542 2333332 3457789999999 5
Q ss_pred EEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 315 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 315 ~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
++.... .+ .|+.+|+.+++......... .+ ....+.| +++.|++....+ ..|+++|+.+++..
T Consensus 131 ~~~~~~-~~--~v~~~d~~~~~~~~~~~~~~---~~------~~~~~~~---dg~~l~~~~~~~--~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 131 YVTNNG-DK--TVSVINTVTKAVINTVSVGR---SP------KGIAVTP---DGTKVYVANFDS--MSISVIDTVTNSVI 193 (391)
T ss_dssp EEEETT-TT--EEEEEETTTTEEEEEEECCS---SE------EEEEECT---TSSEEEEEETTT--TEEEEEETTTTEEE
T ss_pred EEEeCC-CC--EEEEEECCCCcEEEEEecCC---Cc------ceEEECC---CCCEEEEEeCCC--CEEEEEECCCCeEE
Confidence 555433 33 68888988887654442211 11 1244554 677776554333 45888899888655
Q ss_pred eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 395 LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 395 ~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
........+..+ +++++.+++.... .....|+++|+.+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 194 DTVKVEAAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEEECSSEEEEEEECTTSSEEEEEEEC-SSCCEEEEEETTTTEE
T ss_pred EEEecCCCccceEECCCCCEEEEEecC-cCCCcEEEEECCCCeE
Confidence 433222233333 6777777666542 2357899999887753
No 50
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.23 E-value=3.5e-09 Score=109.74 Aligned_cols=291 Identities=7% Similarity=-0.022 Sum_probs=165.0
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCC-CCCc-cccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPK-EYAV-RTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~-~~~~-r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
..+..+.++|++.+++.... ++...+|.... ++.....+. .+.. ...+. ...|. .++.++++...++.
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~---~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~v~---~~~~~-~~~~~~~s~~~d~~ 192 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLE---DEGMDVLDINS---GQTVRLSPPEKYKKKLGFVE---TISIP-EHNELWVSQMQANA 192 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTT---SSSEEEEETTT---CCEEEECCCHHHHTTCCEEE---EEEEG-GGTEEEEEEGGGTE
T ss_pred CCceEEEEeCCCeEEEEeCC---CCeEEEEECCC---CeEeeecCcccccccCCcee---EEEEc-CCCEEEEEECCCCE
Confidence 34557888986666665432 35555565432 244433221 0000 00110 11232 24577788777889
Q ss_pred EEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCc
Q 008927 167 LYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (548)
Q Consensus 167 Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~ 245 (548)
|++.++++ ++.. .+... ......+.|+|||+.|++.... ...|+++|+.+++ ..........
T Consensus 193 v~~~d~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~--------~~~i~~~d~~~~~---~~~~~~~~~~ 255 (433)
T 3bws_A 193 VHVFDLKT--LAYKATVDLT----GKWSKILLYDPIRDLVYCSNWI--------SEDISVIDRKTKL---EIRKTDKIGL 255 (433)
T ss_dssp EEEEETTT--CCEEEEEECS----SSSEEEEEEETTTTEEEEEETT--------TTEEEEEETTTTE---EEEECCCCSE
T ss_pred EEEEECCC--ceEEEEEcCC----CCCeeEEEEcCCCCEEEEEecC--------CCcEEEEECCCCc---EEEEecCCCC
Confidence 99999876 4443 33322 2235567899999987665322 1479999999886 4444334444
Q ss_pred eeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCe
Q 008927 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGF 324 (548)
Q Consensus 246 ~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~ 324 (548)
.....|+|||++|+..........-....|++.++.. ++. ...+.. . ..+..+.|+|||+ +++.... ++
T Consensus 256 ~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~--~~~~~~-~----~~~~~~~~~~~g~~l~~~~~~-~~- 325 (433)
T 3bws_A 256 PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-EKL--IDTIGP-P----GNKRHIVSGNTENKIYVSDMC-CS- 325 (433)
T ss_dssp EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-TEE--EEEEEE-E----ECEEEEEECSSTTEEEEEETT-TT-
T ss_pred ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-CcE--EeeccC-C----CCcceEEECCCCCEEEEEecC-CC-
Confidence 6677899999998866643321110245899999974 542 222211 1 2345689999998 6555443 44
Q ss_pred eeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC------------eEEEEEEECCCCc
Q 008927 325 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG------------RSYLGILDDFGHS 392 (548)
Q Consensus 325 ~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g------------~~~L~~~dl~~g~ 392 (548)
.|+++++.+++.....+.... .....+.| +++.|++.....+ ...|+++|+++++
T Consensus 326 -~v~v~d~~~~~~~~~~~~~~~---------~~~~~~s~---dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 326 -KIEVYDLKEKKVQKSIPVFDK---------PNTIALSP---DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp -EEEEEETTTTEEEEEEECSSS---------EEEEEECT---TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred -EEEEEECCCCcEEEEecCCCC---------CCeEEEcC---CCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 677888888776544322111 11245554 6666765543322 1379999998887
Q ss_pred eEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 393 LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 393 ~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
..........+..+ +++++.+++.... ...|++++++
T Consensus 393 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---d~~i~v~~~~ 431 (433)
T 3bws_A 393 VKEFWEAGNQPTGLDVSPDNRYLVISDFL---DHQIRVYRRD 431 (433)
T ss_dssp EEEEEECSSSEEEEEECTTSCEEEEEETT---TTEEEEEEET
T ss_pred EEEEecCCCCCceEEEcCCCCEEEEEECC---CCeEEEEEec
Confidence 65433222234433 6777777654431 2567777654
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.23 E-value=3.1e-09 Score=105.94 Aligned_cols=266 Identities=7% Similarity=-0.018 Sum_probs=145.2
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
.+..+.++| |+.+|..... .+...+|.++..+ +..+.+...... ... ...+|+++++.|++....++.|+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~---~~~v~~~~~~~~~-~~~~~~~~~~~~--~~~---~~~~~s~dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRP---EFRVLAYRIAPDD-GALTFAAESALP--GSL---THISTDHQGQFVFVGSYNAGNVS 109 (343)
T ss_dssp CCCCEEECTTSSEEEEEETT---TTEEEEEEECTTT-CCEEEEEEEECS--SCC---SEEEECTTSSEEEEEETTTTEEE
T ss_pred CCceEEECCCCCEEEEeecC---CCeEEEEEecCCC-CceeeccccccC--CCC---cEEEEcCCCCEEEEEecCCCeEE
Confidence 456789999 7777776532 3666777775332 233333211000 011 12357778888888887777788
Q ss_pred EEeCCCC-CCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCC-CCccCcEEe-----ee
Q 008927 169 KHSIDSK-DSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG-QNIQEPKVL-----VS 241 (548)
Q Consensus 169 ~~~~~~~-~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~-g~~~~~~~L-----~~ 241 (548)
+++++.+ ..+....... ......+.|+|||+.|+..... ...|+++|+.+ ++ ...+ ..
T Consensus 110 ~~d~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~---~~~~~~~~~~~ 174 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEG----LDGCHSANISPDNRTLWVPALK--------QDRICLFTVSDDGH---LVAQDPAEVTT 174 (343)
T ss_dssp EEEEETTEEEEEEEEECC----CTTBCCCEECTTSSEEEEEEGG--------GTEEEEEEECTTSC---EEEEEEEEEEC
T ss_pred EEECCCCccccccccccC----CCCceEEEECCCCCEEEEecCC--------CCEEEEEEecCCCc---eeeeccccccc
Confidence 7777320 0122222222 1235567899999987654312 13688888887 65 4322 21
Q ss_pred c-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecC-CCceeeeEEEcCCCCC--cccCCcCceECcCCcEEEE
Q 008927 242 G-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE-NGDVYKRVCVAGFDPT--IVESPTEPKWSSKGELFFV 317 (548)
Q Consensus 242 ~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~-~g~~~~~~~l~~~~~~--~~~~~~~~~wspDG~L~~~ 317 (548)
. ........|+|||++|++... ....|.+++++. .|++.....+...... .......+.|+|||+.+|+
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~-------~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNE-------LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYA 247 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEET-------TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEE
T ss_pred CCCCCcceEEECCCCCEEEEEeC-------CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEE
Confidence 1 123445689999998875541 135788889853 3443222222211100 0012235889999994455
Q ss_pred EeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEee
Q 008927 318 TDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 396 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l 396 (548)
+....+.-.+|.++.++++.+.+...... .. ...+.+.| +++.|++....++.-.+|.+|.++|+++.+
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~------~~~~~~s~---dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSKEGFQPTE-TQ------PRGFNVDH---SGKYLIAAGQKSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEEEEEEECS-SS------CCCEEECT---TSSEEEEECTTTCEEEEEEEETTTTEEEEE
T ss_pred EecCCCEEEEEEEcCCCCceEEeeeecCC-Cc------cceEEECC---CCCEEEEecCCCCeEEEEEEcCCCceeeEc
Confidence 54435544444444335554444211100 01 12245654 677777655456777888889888876654
No 52
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.22 E-value=9.1e-10 Score=110.85 Aligned_cols=226 Identities=10% Similarity=-0.037 Sum_probs=126.4
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCC---CC--CCccccceeeCCeeeEEECCEEEEEeC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITP---KE--YAVRTTAQEYGGGAFRIFGDTVIFSNY 162 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~---~~--~~~r~~v~~ygg~~~~~~~~~i~F~~~ 162 (548)
..+..+.++| |+.+|.... .++...+|..+.+ +..+.+.. .. ...|.....-....|+|+|+ |+....
T Consensus 86 ~~p~~~a~spdg~~l~~~~~---~~~~v~v~~~~~~--g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~ 159 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANY---HKGTAEVMKIAAD--GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL 159 (347)
T ss_dssp CCCSEEEEETTTTEEEEEET---TTTEEEEEEECTT--SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET
T ss_pred CCCEEEEECCCCCEEEEEeC---CCCEEEEEEeCCC--CCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC
Confidence 4567789999 766766542 2466677776544 23333221 00 00000000000135777787 777776
Q ss_pred CCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee-
Q 008927 163 KDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS- 241 (548)
Q Consensus 163 ~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~- 241 (548)
.++.|++++++.. ++...+.............+.|+|||+.|++..+.. ..-.+|.++..+++ .+.+..
T Consensus 160 ~~~~v~~~~~~~~-g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~------~~v~v~~~~~~~g~---~~~~~~~ 229 (347)
T 3hfq_A 160 GSDKVYVYNVSDA-GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS------SQIASLKYDTQTGA---FTQLGIV 229 (347)
T ss_dssp TTTEEEEEEECTT-SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT------TEEEEEEEETTTTE---EEEEEEE
T ss_pred CCCEEEEEEECCC-CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC------CEEEEEEecCCCCc---eEEeeee
Confidence 6778888887621 444433210000011233578999999876653321 12345555554565 333321
Q ss_pred --cC------CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 242 --GS------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 242 --~~------~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
.. .......|||||++|+..... ...|.+++++.+|.+.....+.... .....+.|+|||+
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~-------~~~v~v~~~~~~g~~~~~~~~~~~~----~~~~~~~~spdg~ 298 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRG-------YNTLAVFAVTADGHLTLIQQISTEG----DFPRDFDLDPTEA 298 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEET-------TTEEEEEEECGGGCEEEEEEEECSS----SCCCEEEECTTSS
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCC-------CCEEEEEEECCCCcEEEeEEEecCC----CCcCeEEECCCCC
Confidence 11 124567899999988654421 3578888887445433333333321 3456789999999
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
.+++++...+...+|.+|.++|+++.+.
T Consensus 299 ~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 299 FVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 5555554367788898899889877664
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.19 E-value=5e-09 Score=108.53 Aligned_cols=245 Identities=11% Similarity=0.033 Sum_probs=148.3
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCC--CCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY--GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~--~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+|++ ++.++++...++.|+++++.+ ++...+.... .........+.|+|+|+.++.. .. ...|+++
T Consensus 129 ~~s~-~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~-~~--------d~~v~~~ 196 (433)
T 3bws_A 129 RFID-NTRLAIPLLEDEGMDVLDINS--GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ-MQ--------ANAVHVF 196 (433)
T ss_dssp EESS-SSEEEEEBTTSSSEEEEETTT--CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE-GG--------GTEEEEE
T ss_pred EEeC-CCeEEEEeCCCCeEEEEECCC--CeEeeecCcccccccCCceeEEEEcCCCEEEEEE-CC--------CCEEEEE
Confidence 5666 778999887788899999987 5555433210 0011245567899988754432 22 1479999
Q ss_pred ECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCc
Q 008927 227 ALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 306 (548)
|+++++. ...+...........|+|||++|+.... ....|++.|+.. ++. ...+.. . ..+..+
T Consensus 197 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~i~~~d~~~-~~~--~~~~~~-~----~~~~~~ 259 (433)
T 3bws_A 197 DLKTLAY--KATVDLTGKWSKILLYDPIRDLVYCSNW-------ISEDISVIDRKT-KLE--IRKTDK-I----GLPRGL 259 (433)
T ss_dssp ETTTCCE--EEEEECSSSSEEEEEEETTTTEEEEEET-------TTTEEEEEETTT-TEE--EEECCC-C----SEEEEE
T ss_pred ECCCceE--EEEEcCCCCCeeEEEEcCCCCEEEEEec-------CCCcEEEEECCC-CcE--EEEecC-C----CCceEE
Confidence 9998761 2333333344667799999998865542 135799999874 542 223332 2 346778
Q ss_pred eECcCCc-EEEEEeCCC----CeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeE
Q 008927 307 KWSSKGE-LFFVTDRKN----GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (548)
Q Consensus 307 ~wspDG~-L~~~sd~~~----g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~ 381 (548)
.|+|||+ |++...... +...|+.+|+.+++......... . .....+.| +++.++++...++
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---~------~~~~~~~~---~g~~l~~~~~~~~-- 325 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---N------KRHIVSGN---TENKIYVSDMCCS-- 325 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---C------EEEEEECS---STTEEEEEETTTT--
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---C------cceEEECC---CCCEEEEEecCCC--
Confidence 9999999 555543211 23579999998887654432111 1 11234544 6777776654444
Q ss_pred EEEEEECCCCceEeecCCCceeEee--eecCCEEEEEEecCCC-----------CCeEEEEEcCCCce
Q 008927 382 YLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVE-----------PSSVAKVTLDDHKL 436 (548)
Q Consensus 382 ~L~~~dl~~g~~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~-----------p~~l~~~d~~~~~~ 436 (548)
.|+++|+++++..........+..+ +++++.+++....... .+.|+++|+.+++.
T Consensus 326 ~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 326 KIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp EEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred EEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 6778898887654332222233333 6777777666543322 24899999887763
No 54
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.18 E-value=2.9e-09 Score=105.83 Aligned_cols=232 Identities=11% Similarity=0.031 Sum_probs=134.6
Q ss_pred EEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCc-eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 157 VIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLV-SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 157 i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~-~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
++++...++.|+++|+.+ ++.. .+.... .. ....+.|+|||+.+++.... ...|+++|+.+++
T Consensus 3 ~~v~~~~~~~v~~~d~~~--~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~-- 67 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEK--MAVDKVITIAD---AGPTPMVPMVAPGGRIAYATVNK--------SESLVKIDLVTGE-- 67 (337)
T ss_dssp EEEEEETTTEEEEEETTT--TEEEEEEECTT---CTTCCCCEEECTTSSEEEEEETT--------TTEEEEEETTTCC--
T ss_pred EEEEcCCCCeEEEEECCC--CcEEEEEEcCC---CCCCccceEEcCCCCEEEEEeCC--------CCeEEEEECCCCC--
Confidence 455666678999999876 5443 333220 00 34567899999987665322 2479999999987
Q ss_pred CcE-EeeecC-C----ceeeeEECCCCCEEEEEEecCC-CCCC---CCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 235 EPK-VLVSGS-D----FYAFPRMDPRGERMAWIEWHHP-NMPW---DKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 235 ~~~-~L~~~~-~----~~~~p~~SPDGk~La~~~~~~~-~~p~---~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
.. .+..+. . ......|||||++|++...... ...+ ....|++++++. ++. ...+... ....
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~--~~~~~~~-----~~~~ 138 (337)
T 1pby_B 68 -TLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSR--RKAFEAP-----RQIT 138 (337)
T ss_dssp -EEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEE--EEEEECC-----SSCC
T ss_pred -eEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-CcE--EEEEeCC-----CCcc
Confidence 43 333221 0 2345689999999876541100 0001 136899999974 542 2333332 3456
Q ss_pred CceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC----
Q 008927 305 EPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---- 379 (548)
Q Consensus 305 ~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g---- 379 (548)
.+.|+|||+ |++. + ..|+++|+++++.....+.........| .| +++.|++....++
T Consensus 139 ~~~~s~dg~~l~~~-~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~---------s~---dg~~l~~~~~~~~~~~~ 200 (337)
T 1pby_B 139 MLAWARDGSKLYGL-G-----RDLHVMDPEAGTLVEDKPIQSWEAETYA---------QP---DVLAVWNQHESSGVMAT 200 (337)
T ss_dssp CEEECTTSSCEEEE-S-----SSEEEEETTTTEEEEEECSTTTTTTTBC---------CC---BCCCCCCCCTTTTEEEE
T ss_pred eeEECCCCCEEEEe-C-----CeEEEEECCCCcEeeeeeccccCCCcee---------CC---CccEEeeeccCCCceee
Confidence 788999999 6555 3 2599999988876544322110011112 22 3333332211111
Q ss_pred -----------------eEEEEEEECCCCceEeecCC--CceeEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 380 -----------------RSYLGILDDFGHSLSLLDIP--FTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 380 -----------------~~~L~~~dl~~g~~~~l~~~--~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
...|+++|+++++...+... ...... +++|++.+++. . ..|+++|+++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~~~~~~ 272 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDLEKNAS 272 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEETTTTEE
T ss_pred eeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEECCCCcC
Confidence 12689999999887644321 112222 36788887765 2 6899999987764
No 55
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.14 E-value=6.3e-09 Score=104.02 Aligned_cols=159 Identities=12% Similarity=0.039 Sum_probs=96.1
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCC
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~ 232 (548)
++.++.+...++.|+++|+.+ ++.. .+... .......+.|+|||+.+++.. .. ...|+++|+.+++
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~--~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~-~~-------~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVAS--DTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLN-NH-------YGDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTT--TEEEEEEECS---SCCSSCEEEECTTSSEEEEEE-TT-------TTEEEEEETTTTE
T ss_pred CCEEEEEeCCCCeEEEEECCC--CcEEEEEecC---CCCCCceeEECCCCCEEEEEe-CC-------CCcEEEEeCCCCc
Confidence 446677766788999999986 5443 33322 111345678999999776653 21 2479999999886
Q ss_pred ccCcEEeeecCC-------ceeeeEECCCCCEEEEEEecC--CCCCC--CCceEEEEEecCCCceee-eEEEcCCCCCcc
Q 008927 233 IQEPKVLVSGSD-------FYAFPRMDPRGERMAWIEWHH--PNMPW--DKAELWVGYISENGDVYK-RVCVAGFDPTIV 300 (548)
Q Consensus 233 ~~~~~~L~~~~~-------~~~~p~~SPDGk~La~~~~~~--~~~p~--~~~~L~v~~~~~~g~~~~-~~~l~~~~~~~~ 300 (548)
......... ......|||||++|++...+. ....+ ....|+++|++. ++... ...... .
T Consensus 77 ---~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~-~---- 147 (349)
T 1jmx_B 77 ---NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD-GLEAKPVRTFPM-P---- 147 (349)
T ss_dssp ---EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG-GGGBCCSEEEEC-C----
T ss_pred ---EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC-ccccceeeeccC-C----
Confidence 433222111 134568999999988665320 00001 135899999974 43211 122222 2
Q ss_pred cCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEee
Q 008927 301 ESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAI 340 (548)
Q Consensus 301 ~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l 340 (548)
..+..+.|+|||++ |+.+. .|+++|+++++....
T Consensus 148 ~~~~~~~~s~dg~l-~~~~~-----~i~~~d~~~~~~~~~ 181 (349)
T 1jmx_B 148 RQVYLMRAADDGSL-YVAGP-----DIYKMDVKTGKYTVA 181 (349)
T ss_dssp SSCCCEEECTTSCE-EEESS-----SEEEECTTTCCEEEE
T ss_pred CcccceeECCCCcE-EEccC-----cEEEEeCCCCceecc
Confidence 34566779999994 44433 299999988876543
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.11 E-value=3.1e-08 Score=98.16 Aligned_cols=237 Identities=8% Similarity=-0.028 Sum_probs=141.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceec---CCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPI---TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~l---T~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|++++..|+... ++.|.+.++..+ .....+ .... ....+..+.|+|||+.|+....+ ..|.+
T Consensus 58 ~~~~~~~~l~~~~--dg~i~iw~~~~~-~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d---------~~i~~ 123 (337)
T 1gxr_A 58 TISNPTRHVYTGG--KGCVKVWDISHP-GNKSPVSQLDCLN--RDNYIRSCKLLPDGCTLIVGGEA---------STLSI 123 (337)
T ss_dssp EECSSSSEEEEEC--BSEEEEEETTST-TCCSCSEEEECSC--TTSBEEEEEECTTSSEEEEEESS---------SEEEE
T ss_pred EEecCCcEEEEcC--CCeEEEEECCCC-CceeeeecccccC--CCCcEEEEEEcCCCCEEEEEcCC---------CcEEE
Confidence 5667777777765 777888787652 222222 1100 12346678899999988775433 36888
Q ss_pred EECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
+|+.+++......+...........|+|||+.|+.... ...|++.++.. ++ ....+.... ..+..
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--------dg~v~~~d~~~-~~--~~~~~~~~~----~~i~~ 188 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS--------DGNIAVWDLHN-QT--LVRQFQGHT----DGASC 188 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET--------TSCEEEEETTT-TE--EEEEECCCS----SCEEE
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC--------CCcEEEEeCCC-Cc--eeeeeeccc----CceEE
Confidence 89988761001222333344667899999998875542 34688999874 43 233444333 45778
Q ss_pred ceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 306 ~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
+.|+|||++++.... +| .|+.+|+.+++........ .+ .....+.| +++.|+. ...++ .|++
T Consensus 189 ~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~----~~-----v~~~~~s~---~~~~l~~-~~~~~--~i~~ 250 (337)
T 1gxr_A 189 IDISNDGTKLWTGGL-DN--TVRSWDLREGRQLQQHDFT----SQ-----IFSLGYCP---TGEWLAV-GMESS--NVEV 250 (337)
T ss_dssp EEECTTSSEEEEEET-TS--EEEEEETTTTEEEEEEECS----SC-----EEEEEECT---TSSEEEE-EETTS--CEEE
T ss_pred EEECCCCCEEEEEec-CC--cEEEEECCCCceEeeecCC----Cc-----eEEEEECC---CCCEEEE-EcCCC--cEEE
Confidence 899999995555444 34 5777788777654433211 11 11244553 6665554 44444 4777
Q ss_pred EECCCCceEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 386 LDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 386 ~dl~~g~~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+|+.+++...+......+..+ +++++.++. ++. ...|.++|+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~---dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 251 LHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS-TGK---DNLLNAWRTPYGAS 299 (337)
T ss_dssp EETTSSCEEEECCCSSCEEEEEECTTSSEEEE-EET---TSEEEEEETTTCCE
T ss_pred EECCCCCeEEEcCCccceeEEEECCCCCEEEE-ecC---CCcEEEEECCCCeE
Confidence 888888776665443445444 566775543 332 35788899877653
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.08 E-value=7.5e-08 Score=95.33 Aligned_cols=265 Identities=9% Similarity=0.019 Sum_probs=150.2
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCC-CCCCccccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITP-KEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~-~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
..+..+.++| |..++... +|...||..... .....+.. ........+. .-.|++++..|+... .++.
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~l~~~~-~d~~ 120 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-----KGCVKVWDISHP--GNKSPVSQLDCLNRDNYIR---SCKLLPDGCTLIVGG-EAST 120 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-----BSEEEEEETTST--TCCSCSEEEECSCTTSBEE---EEEECTTSSEEEEEE-SSSE
T ss_pred CceEEEEEecCCcEEEEcC-----CCeEEEEECCCC--CceeeeecccccCCCCcEE---EEEEcCCCCEEEEEc-CCCc
Confidence 5677889999 66555442 377778877543 22222211 0000011111 125666666666654 5678
Q ss_pred EEEEeCCCCCCCce---ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecC
Q 008927 167 LYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS 243 (548)
Q Consensus 167 Ly~~~~~~~~~~~~---~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~ 243 (548)
|++.++.. ++.+ .+... ......+.|+|+++.|+....+ ..|.++|+.+++. ...+....
T Consensus 121 i~~~d~~~--~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d---------g~v~~~d~~~~~~--~~~~~~~~ 183 (337)
T 1gxr_A 121 LSIWDLAA--PTPRIKAELTSS----APACYALAISPDSKVCFSCCSD---------GNIAVWDLHNQTL--VRQFQGHT 183 (337)
T ss_dssp EEEEECCC--C--EEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTEE--EEEECCCS
T ss_pred EEEEECCC--CCcceeeecccC----CCceEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCce--eeeeeccc
Confidence 88888876 4432 22222 2245677899999987765433 3588899988761 23333334
Q ss_pred CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCC
Q 008927 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (548)
Q Consensus 244 ~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g 323 (548)
.......|+|||+.|+.... ...|++.|+.. ++. ...+.. . ..+..+.|+|||+++++... ++
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~--------dg~i~~~d~~~-~~~--~~~~~~-~----~~v~~~~~s~~~~~l~~~~~-~~ 246 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGL--------DNTVRSWDLRE-GRQ--LQQHDF-T----SQIFSLGYCPTGEWLAVGME-SS 246 (337)
T ss_dssp SCEEEEEECTTSSEEEEEET--------TSEEEEEETTT-TEE--EEEEEC-S----SCEEEEEECTTSSEEEEEET-TS
T ss_pred CceEEEEECCCCCEEEEEec--------CCcEEEEECCC-Cce--EeeecC-C----CceEEEEECCCCCEEEEEcC-CC
Confidence 45677899999998885541 35799999874 431 222322 2 45677899999995555443 33
Q ss_pred eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCCcee
Q 008927 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDI 403 (548)
Q Consensus 324 ~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~ 403 (548)
.|+.+++.+++...+..... + .....+.| +++.|+ +...++ .|.++|+.+++..........+
T Consensus 247 --~i~~~~~~~~~~~~~~~~~~----~-----v~~~~~~~---~~~~l~-~~~~dg--~i~~~~~~~~~~~~~~~~~~~v 309 (337)
T 1gxr_A 247 --NVEVLHVNKPDKYQLHLHES----C-----VLSLKFAY---CGKWFV-STGKDN--LLNAWRTPYGASIFQSKESSSV 309 (337)
T ss_dssp --CEEEEETTSSCEEEECCCSS----C-----EEEEEECT---TSSEEE-EEETTS--EEEEEETTTCCEEEEEECSSCE
T ss_pred --cEEEEECCCCCeEEEcCCcc----c-----eeEEEECC---CCCEEE-EecCCC--cEEEEECCCCeEEEEecCCCcE
Confidence 47777887776654432111 1 12244553 555554 444455 4667788877655332222234
Q ss_pred Eee--eecCCEEEE
Q 008927 404 DNI--TLGNDCLFV 415 (548)
Q Consensus 404 ~~~--s~d~~~l~~ 415 (548)
..+ +++++.++.
T Consensus 310 ~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 310 LSCDISVDDKYIVT 323 (337)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEE
Confidence 433 566665543
No 58
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.06 E-value=2.4e-08 Score=101.05 Aligned_cols=168 Identities=10% Similarity=0.046 Sum_probs=102.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCC----C-c------eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDS----S-P------LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDAL 217 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~----~-~------~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~ 217 (548)
.|+|+|+.|++.+..++.|++++++...+ + . ..+.... ......+.|||||+.|++..+..
T Consensus 161 ~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~v~~~~~----- 232 (361)
T 3scy_A 161 RITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP---GSGPRHLIFNSDGKFAYLINEIG----- 232 (361)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT---TCCEEEEEECTTSSEEEEEETTT-----
T ss_pred EECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC---CCCCeEEEEcCCCCEEEEEcCCC-----
Confidence 67778888999887777777776654212 2 1 1111111 12234578999999876654221
Q ss_pred CceeEEEEEECCCCCccCcEEeee---cC---CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEec-CCCceeeeE
Q 008927 218 NSTTEIVAIALNGQNIQEPKVLVS---GS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENGDVYKRV 290 (548)
Q Consensus 218 ~~~~~l~~idl~~g~~~~~~~L~~---~~---~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~-~~g~~~~~~ 290 (548)
..|.++++++++ .+.+.. .. .......|||||++|+... .. ....|.+++++ .+|++....
T Consensus 233 ---~~v~v~~~~~g~---~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~-~~-----~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 233 ---GTVIAFRYADGM---LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN-RL-----KADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp ---CEEEEEEEETTE---EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE-CS-----SSCEEEEEEECTTTCCEEEEE
T ss_pred ---CeEEEEEecCCc---eEEeEEEecCCCCCCCcccEEECCCCCEEEEEC-CC-----CCCEEEEEEEcCCCCcEEEee
Confidence 467888887776 433322 11 1234678999999886433 21 03467777775 235433222
Q ss_pred EEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 291 CVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 291 ~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
.+.. . .....+.|+|||+.+++++...+.-.+|.+|+++|+.+.+.
T Consensus 301 ~~~~-g----~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 301 YQLT-G----IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEC-S----SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EecC-C----CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 2332 1 34567899999995555554367788999999898877664
No 59
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.06 E-value=1e-10 Score=113.53 Aligned_cols=77 Identities=18% Similarity=0.312 Sum_probs=50.9
Q ss_pred CCCccCCeE-EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCC
Q 008927 455 KSYFSLPEL-IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYG 533 (548)
Q Consensus 455 ~~~~~~pe~-i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyR 533 (548)
+..++..|. ++++ . ||.+|+|+|+.|.+ .++.|+||++|||+.....+.+....|+||++||+|+.+|+|
T Consensus 24 ~~~~~~~e~~~~~~-~-dG~~i~g~l~~P~~-------~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 24 ERKLSVQERGFSLE-V-DGRTVPGVYWSPAE-------GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp EEETTEEEEEEEEE-E-TTEEEEEEEEEESS-------SCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred cccCCceEEEEEEe-e-CCeEEEEEEEeCCC-------CCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 344444444 4444 4 99999999999964 356799999999998877777888899999999999999999
Q ss_pred CCCCCCh
Q 008927 534 GSTGLSS 540 (548)
Q Consensus 534 GStGyG~ 540 (548)
|+...+.
T Consensus 95 G~G~s~~ 101 (259)
T 4ao6_A 95 GHGERAS 101 (259)
T ss_dssp C------
T ss_pred CCCCCCC
Confidence 9865543
No 60
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.02 E-value=3.1e-07 Score=92.03 Aligned_cols=307 Identities=11% Similarity=0.072 Sum_probs=170.9
Q ss_pred cccCCCCCCCcCCHHHHhcCCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeC
Q 008927 68 ITAPYGSWKSPLTADVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYG 146 (548)
Q Consensus 68 ~~~~~g~w~spit~~~l~~~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~yg 146 (548)
.-...|+...+++. ......+..+.++| |+.++... .+|...||..... .....+......+.
T Consensus 15 ~~~~~G~~~~~~~l---~~h~~~v~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~--~~~~~~~~h~~~v~------- 78 (369)
T 3zwl_B 15 NLYFQGSHMKAIKL---TGHERPLTQVKYNKEGDLLFSCS----KDSSASVWYSLNG--ERLGTLDGHTGTIW------- 78 (369)
T ss_dssp CCCSSCCSEEEEEE---ECCSSCEEEEEECTTSCEEEEEE----SSSCEEEEETTTC--CEEEEECCCSSCEE-------
T ss_pred ceEEeccccccEEE---EEeeceEEEEEEcCCCCEEEEEe----CCCEEEEEeCCCc--hhhhhhhhcCCcEE-------
Confidence 44556777777654 33345688899999 66555433 2577777866432 22333332211111
Q ss_pred CeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
...|++++..|+... .++.|++.++.. ++....... ......+.|+|+|+.|++...+... ....|.++
T Consensus 79 ~~~~~~~~~~l~s~~-~dg~i~iwd~~~--~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~~~~----~~g~i~~~ 147 (369)
T 3zwl_B 79 SIDVDCFTKYCVTGS-ADYSIKLWDVSN--GQCVATWKS----PVPVKRVEFSPCGNYFLAILDNVMK----NPGSINIY 147 (369)
T ss_dssp EEEECTTSSEEEEEE-TTTEEEEEETTT--CCEEEEEEC----SSCEEEEEECTTSSEEEEEECCBTT----BCCEEEEE
T ss_pred EEEEcCCCCEEEEEe-CCCeEEEEECCC--CcEEEEeec----CCCeEEEEEccCCCEEEEecCCccC----CCCEEEEE
Confidence 125666666665544 577888889876 444332222 2346678899999998876543110 12356677
Q ss_pred ECCCCCcc---------CcEEeeecCC--ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCC
Q 008927 227 ALNGQNIQ---------EPKVLVSGSD--FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF 295 (548)
Q Consensus 227 dl~~g~~~---------~~~~L~~~~~--~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~ 295 (548)
|+.++... ....+..... ......|+|||+.|+... ....|++.|+...+. ....+...
T Consensus 148 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~--~~~~~~~~ 217 (369)
T 3zwl_B 148 EIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH--------KDGKISKYDVSNNYE--YVDSIDLH 217 (369)
T ss_dssp EEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE--------TTSEEEEEETTTTTE--EEEEEECC
T ss_pred EecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc--------CCCEEEEEECCCCcE--eEEEEecC
Confidence 76655310 0122222222 466778999999887544 135799999975343 23334433
Q ss_pred CCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEE
Q 008927 296 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (548)
Q Consensus 296 ~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~ 375 (548)
. ..+..+.|+|||++++.... +| .|..+|+.+++........... ....+.| +++.+++..
T Consensus 218 ~----~~v~~~~~~~~~~~l~~~~~-d~--~i~v~d~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~l~~~~ 278 (369)
T 3zwl_B 218 E----KSISDMQFSPDLTYFITSSR-DT--NSFLVDVSTLQVLKKYETDCPL---------NTAVITP---LKEFIILGG 278 (369)
T ss_dssp S----SCEEEEEECTTSSEEEEEET-TS--EEEEEETTTCCEEEEEECSSCE---------EEEEECS---SSSEEEEEE
T ss_pred C----CceeEEEECCCCCEEEEecC-Cc--eEEEEECCCCceeeeecCCCCc---------eeEEecC---CCceEEEee
Confidence 3 45778899999995555444 34 5777888777654433211111 1133443 555555443
Q ss_pred EeC-----------CeEEEEEEECCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 376 RQN-----------GRSYLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 376 ~~~-----------g~~~L~~~dl~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
..+ +...+.++|..+++.. .+......+..+ +++++.|+. ++. ...|.+++++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~---dg~v~iw~~~~~ 347 (369)
T 3zwl_B 279 GQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYAS-GGE---DGFIRLHHFEKS 347 (369)
T ss_dssp CCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE-EET---TSEEEEEEECHH
T ss_pred cCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEE-EcC---CCeEEEEECccc
Confidence 221 2236778888777644 333333345444 566665543 332 256777877654
No 61
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.96 E-value=1.9e-07 Score=94.79 Aligned_cols=171 Identities=10% Similarity=-0.007 Sum_probs=89.7
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCC-CCCCCceecCCCCCCCCceecceeeCCCCCEE-EEEEeccCCC-CCC----cee
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSID-SKDSSPLPITPDYGEPLVSYADGIFDPRFNRY-VTVREDRRQD-ALN----STT 221 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~-~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i-~~v~~~~~~~-~~~----~~~ 221 (548)
+|+++++.|+..+.. .|.+++++ . ++..++..... ......+.|+|||++| +++.....-. ..+ ...
T Consensus 46 a~spdg~~l~~~~~~--~v~~~~~~~~--g~~~~~~~~~~--~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 46 TFDHERKNIYGAAMK--KWSSFAVKSP--TEIVHEASHPI--GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp EECTTSSEEEEEEBT--EEEEEEEEET--TEEEEEEEEEC--CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred EECCCCCEEEEEccc--eEEEEEECCC--CCEEEeeEeec--CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 566777777766643 67666664 3 44443322100 0112346799999974 4443200000 000 012
Q ss_pred EEEEEECC-CCCccCcEEeee----cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCC
Q 008927 222 EIVAIALN-GQNIQEPKVLVS----GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD 296 (548)
Q Consensus 222 ~l~~idl~-~g~~~~~~~L~~----~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~ 296 (548)
.+.+++++ .|+. ...+.. .........|||||++|+ +. +. ....|++++++.+|++.....+....
T Consensus 120 ~v~v~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~spdG~~l~-~~-~~-----~~~~v~~~~~~~~g~~~~~~~~~~~~ 190 (365)
T 1jof_A 120 YGNVFSVSETGKL--EKNVQNYEYQENTGIHGMVFDPTETYLY-SA-DL-----TANKLWTHRKLASGEVELVGSVDAPD 190 (365)
T ss_dssp EEEEEEECTTCCE--EEEEEEEECCTTCCEEEEEECTTSSEEE-EE-ET-----TTTEEEEEEECTTSCEEEEEEEECSS
T ss_pred eEEEEccCCCCcC--cceEeeEEeCCCCcceEEEECCCCCEEE-EE-cC-----CCCEEEEEEECCCCCEEEeeeEecCC
Confidence 45555554 3441 222321 233456788999999875 44 21 13579999997335432222222100
Q ss_pred CCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCee
Q 008927 297 PTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 297 ~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
.. .....+.|+|||+ ||+.... .+.-.+|.++.++|+.
T Consensus 191 ~g--~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 191 PG--DHPRWVAMHPTGNYLYALMEA-GNRICEYVIDPATHMP 229 (365)
T ss_dssp TT--CCEEEEEECTTSSEEEEEETT-TTEEEEEEECTTTCCE
T ss_pred CC--CCCCEeEECCCCCEEEEEECC-CCeEEEEEEeCCCCcE
Confidence 01 2355678999999 5544444 6666777777767764
No 62
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.91 E-value=1.1e-07 Score=96.52 Aligned_cols=219 Identities=13% Similarity=0.008 Sum_probs=116.5
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC-CCCccCcEEeee--cCCceeeeEECCCCCEE-EEEEecCCCC
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN-GQNIQEPKVLVS--GSDFYAFPRMDPRGERM-AWIEWHHPNM 268 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~-~g~~~~~~~L~~--~~~~~~~p~~SPDGk~L-a~~~~~~~~~ 268 (548)
...+.|+|||+.|+...++ .|.+++++ +|+ ...+.. ..+......|||||++| +++.....-.
T Consensus 42 ~~~~a~spdg~~l~~~~~~----------~v~~~~~~~~g~---~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~ 108 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK----------KWSSFAVKSPTE---IVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYA 108 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT----------EEEEEEEEETTE---EEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCC
T ss_pred CcEEEECCCCCEEEEEccc----------eEEEEEECCCCC---EEEeeEeecCCCCccEEECCCCCEEEEEEecCCcce
Confidence 4457899999987654321 46666665 665 444322 11223346899999974 4444100000
Q ss_pred CC------CCceEEEEEecCCCceeeeEEE-cCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc-CCeeEee
Q 008927 269 PW------DKAELWVGYISENGDVYKRVCV-AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEVLAI 340 (548)
Q Consensus 269 p~------~~~~L~v~~~~~~g~~~~~~~l-~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~-~g~~~~l 340 (548)
.+ ....+.+++++.+|++...... .... . .....+.|+|||+.+|+++.+. ..|++++++ +|+.+.+
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~-~--~~~~~~~~spdG~~l~~~~~~~--~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQE-N--TGIHGMVFDPTETYLYSADLTA--NKLWTHRKLASGEVELV 183 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCT-T--CCEEEEEECTTSSEEEEEETTT--TEEEEEEECTTSCEEEE
T ss_pred eccceeecCCceEEEEccCCCCcCcceEeeEEeCC-C--CcceEEEECCCCCEEEEEcCCC--CEEEEEEECCCCCEEEe
Confidence 00 1345778888755653222111 1111 1 3456789999999656766533 367777776 6776543
Q ss_pred cccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE----eec-CCC-----c-------ee
Q 008927 341 YSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS----LLD-IPF-----T-------DI 403 (548)
Q Consensus 341 ~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~----~l~-~~~-----~-------~~ 403 (548)
....... . . .+...+.++| |++.||+....++.-.++.+|.++|+.. .+. .+. . ..
T Consensus 184 ~~~~~~~-~-g--~~p~~~~~sp---dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 256 (365)
T 1jof_A 184 GSVDAPD-P-G--DHPRWVAMHP---TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYR 256 (365)
T ss_dssp EEEECSS-T-T--CCEEEEEECT---TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEE
T ss_pred eeEecCC-C-C--CCCCEeEECC---CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccc
Confidence 2110000 0 0 1112345664 7777766544456667777777677643 222 221 1 12
Q ss_pred E--e-eeecCCEEEEEEecCC--CCCeEEEEEcC-CCce
Q 008927 404 D--N-ITLGNDCLFVEGASGV--EPSSVAKVTLD-DHKL 436 (548)
Q Consensus 404 ~--~-~s~d~~~l~~~~ss~~--~p~~l~~~d~~-~~~~ 436 (548)
. . +++|++.|++.....+ .+..|.+++++ ++++
T Consensus 257 ~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 257 ADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp EEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE
T ss_pred ccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE
Confidence 2 3 5688888865543322 23477777774 5654
No 63
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.88 E-value=2.8e-07 Score=92.22 Aligned_cols=226 Identities=12% Similarity=0.007 Sum_probs=128.0
Q ss_pred CeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+..|.++++.|+|++..+++||++++++ ++.+.++.. .....+.|+|||+.++.. . ..|+++
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~--~~~~~~~~~-----~~v~~i~~~~dg~l~v~~--~---------~gl~~~ 114 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLAS--GRKTVHALP-----FMGSALAKISDSKQLIAS--D---------DGLFLR 114 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTT--TEEEEEECS-----SCEEEEEEEETTEEEEEE--T---------TEEEEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCC--CcEEEEECC-----CcceEEEEeCCCeEEEEE--C---------CCEEEE
Confidence 4578888889999987778999999987 555554332 234566799998865542 2 249999
Q ss_pred ECCCCCccCcEEeeecC-----CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCccc
Q 008927 227 ALNGQNIQEPKVLVSGS-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~~-----~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~ 301 (548)
|+++++ .+.+.... .......++|||+ |.+....... ......||.++ + |++ ..+.... .
T Consensus 115 d~~~g~---~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~-~~~~~~l~~~~-~--g~~---~~~~~~~----~ 179 (326)
T 2ghs_A 115 DTATGV---LTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKA-ETGAGSIYHVA-K--GKV---TKLFADI----S 179 (326)
T ss_dssp ETTTCC---EEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTC-CTTCEEEEEEE-T--TEE---EEEEEEE----S
T ss_pred ECCCCc---EEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcC-CCCceEEEEEe-C--CcE---EEeeCCC----c
Confidence 999988 66665321 1245678999998 4333322110 11245788888 3 542 2222211 2
Q ss_pred CCcCceECcCCc-EEEEEeCCCCeeeEEEEecc--CC-ee---EeecccccccCCCcccccCcceeeeeecCCCCEEEEE
Q 008927 302 SPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIES--NN-EV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACS 374 (548)
Q Consensus 302 ~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~--~g-~~---~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~ 374 (548)
....+.|+|||+ ||+.... . ..|++++.+ +| +. +.+...... .+.. ..+.+. .++.|++.
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~-~--~~I~~~d~~~~~Gl~~~~~~~~~~~~~~----~~~p--~gi~~d----~~G~lwva 246 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTK-V--NRLMRVPLDARTGLPTGKAEVFIDSTGI----KGGM--DGSVCD----AEGHIWNA 246 (326)
T ss_dssp SEEEEEECTTSCEEEEEETT-T--CEEEEEEBCTTTCCBSSCCEEEEECTTS----SSEE--EEEEEC----TTSCEEEE
T ss_pred ccCCeEEcCCCCEEEEEECC-C--CEEEEEEcccccCCcccCceEEEECCCC----CCCC--CeeEEC----CCCCEEEE
Confidence 235688999999 6554332 2 468888874 55 42 112111000 1111 113332 23345544
Q ss_pred EEeCCeEEEEEEECCCCceEeecCCCceeEee--e-ecCCEEEEEEecC
Q 008927 375 YRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI--T-LGNDCLFVEGASG 420 (548)
Q Consensus 375 ~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~~~--s-~d~~~l~~~~ss~ 420 (548)
...+ ..|+++|+++...+.+..+...+..+ + ++++.|++.....
T Consensus 247 ~~~~--~~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 247 RWGE--GAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EETT--TEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EeCC--CEEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 3222 36889998544455665554344444 3 5667777665543
No 64
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.9e-06 Score=86.22 Aligned_cols=229 Identities=12% Similarity=0.051 Sum_probs=130.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|++++..|+.. ..++.|++.++.. ++. ..+... ...+..+.|+||++.|+....+ ..|.++|
T Consensus 39 ~~s~~~~~l~~~-~~dg~i~vwd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------g~i~iwd 102 (369)
T 3zwl_B 39 KYNKEGDLLFSC-SKDSSASVWYSLN--GERLGTLDGH----TGTIWSIDVDCFTKYCVTGSAD---------YSIKLWD 102 (369)
T ss_dssp EECTTSCEEEEE-ESSSCEEEEETTT--CCEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------TEEEEEE
T ss_pred EEcCCCCEEEEE-eCCCEEEEEeCCC--chhhhhhhhc----CCcEEEEEEcCCCCEEEEEeCC---------CeEEEEE
Confidence 456666655554 3567788888876 444 344433 2346678899999988775433 3688999
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeee--------EEEcCCCCCc
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR--------VCVAGFDPTI 299 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~--------~~l~~~~~~~ 299 (548)
+.+++ ...............|+|||+.|+....+... ....|.+.++......... ..+......
T Consensus 103 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~---~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (369)
T 3zwl_B 103 VSNGQ---CVATWKSPVPVKRVEFSPCGNYFLAILDNVMK---NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL- 175 (369)
T ss_dssp TTTCC---EEEEEECSSCEEEEEECTTSSEEEEEECCBTT---BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC-
T ss_pred CCCCc---EEEEeecCCCeEEEEEccCCCEEEEecCCccC---CCCEEEEEEecCCccceeecccccceeeeccCCcCc-
Confidence 99987 54444455557778999999998866532111 1257888888743221111 111111100
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccC-CeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~-g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~ 378 (548)
..+....|+|||+++++... +| .|+.+|+.+ ++........ ..+ .....|.| +++.|+ +...+
T Consensus 176 -~~~~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~---~~~-----v~~~~~~~---~~~~l~-~~~~d 239 (369)
T 3zwl_B 176 -DAATVAGWSTKGKYIIAGHK-DG--KISKYDVSNNYEYVDSIDLH---EKS-----ISDMQFSP---DLTYFI-TSSRD 239 (369)
T ss_dssp -CCEEEEEECGGGCEEEEEET-TS--EEEEEETTTTTEEEEEEECC---SSC-----EEEEEECT---TSSEEE-EEETT
T ss_pred -cceeEEEEcCCCCEEEEEcC-CC--EEEEEECCCCcEeEEEEecC---CCc-----eeEEEECC---CCCEEE-EecCC
Confidence 15667889999995555544 44 577778766 4433222110 011 12244553 555554 44444
Q ss_pred CeEEEEEEECCCCceEeecCCCceeEee--eecCCEEEEEEe
Q 008927 379 GRSYLGILDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGA 418 (548)
Q Consensus 379 g~~~L~~~dl~~g~~~~l~~~~~~~~~~--s~d~~~l~~~~s 418 (548)
+ .|.++|+.+++..........+..+ +++++.+++...
T Consensus 240 ~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 240 T--NSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp S--EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC
T ss_pred c--eEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeec
Confidence 4 5777888887654332222223333 667776665543
No 65
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.86 E-value=3.2e-06 Score=83.28 Aligned_cols=268 Identities=11% Similarity=0.033 Sum_probs=146.5
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| |+.++-.. .+|...||..... ...+.+......+. .-.|+++++.|+... .++.|
T Consensus 24 ~~v~~~~~s~~~~~l~s~~----~dg~i~iw~~~~~--~~~~~~~~h~~~v~-------~~~~~~~~~~l~s~~-~d~~i 89 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSS----ADKLIKIWGAYDG--KFEKTISGHKLGIS-------DVAWSSDSNLLVSAS-DDKTL 89 (312)
T ss_dssp SCEEEEEECTTSSEEEEEE----TTSCEEEEETTTC--CEEEEECCCSSCEE-------EEEECTTSSEEEEEE-TTSEE
T ss_pred CcEEEEEECCCCCEEEEee----CCCeEEEEeCCCc--ccchhhccCCCceE-------EEEEcCCCCEEEEEC-CCCEE
Confidence 5577889999 66554433 2577777765332 12222322211111 125667776665544 56788
Q ss_pred EEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCce
Q 008927 168 YKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFY 246 (548)
Q Consensus 168 y~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~ 246 (548)
.+.++.. ++. +.+... ........|+|+++.|+....+ ..|.++|+.+++. ...+......+
T Consensus 90 ~vwd~~~--~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d---------~~i~iwd~~~~~~--~~~~~~~~~~v 152 (312)
T 4ery_A 90 KIWDVSS--GKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFD---------ESVRIWDVKTGKC--LKTLPAHSDPV 152 (312)
T ss_dssp EEEETTT--CCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTCCE--EEEECCCSSCE
T ss_pred EEEECCC--CcEEEEEcCC----CCCEEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCEE--EEEecCCCCcE
Confidence 8888876 443 334332 1235567899999987765433 3588889988761 23343334456
Q ss_pred eeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeee
Q 008927 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 326 (548)
Q Consensus 247 ~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~ 326 (548)
....|+|||+.|+.... ...|.+.|+.. ++ ....+.... . ..+....|+|||++++.... +| .
T Consensus 153 ~~~~~~~~~~~l~~~~~--------d~~i~~wd~~~-~~--~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~~~-d~--~ 215 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSY--------DGLCRIWDTAS-GQ--CLKTLIDDD-N--PPVSFVKFSPNGKYILAATL-DN--T 215 (312)
T ss_dssp EEEEECTTSSEEEEEET--------TSCEEEEETTT-CC--EEEEECCSS-C--CCEEEEEECTTSSEEEEEET-TT--E
T ss_pred EEEEEcCCCCEEEEEeC--------CCcEEEEECCC-Cc--eeeEEeccC-C--CceEEEEECCCCCEEEEEcC-CC--e
Confidence 77889999998875442 34688889874 43 122232211 1 34566889999995555444 44 5
Q ss_pred EEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCceeEe
Q 008927 327 LHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDN 405 (548)
Q Consensus 327 Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~~~ 405 (548)
|..+|+.+++.......... ..+.. ...+.+ +++.++++...++ .|+++|+.+++.. .+......+..
T Consensus 216 i~iwd~~~~~~~~~~~~~~~---~~~~~---~~~~~~---~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~ 284 (312)
T 4ery_A 216 LKLWDYSKGKCLKTYTGHKN---EKYCI---FANFSV---TGGKWIVSGSEDN--LVYIWNLQTKEIVQKLQGHTDVVIS 284 (312)
T ss_dssp EEEEETTTTEEEEEECSSCC---SSSCC---CEEEEC---SSSCEEEECCTTS--CEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEECCCCcEEEEEEecCC---ceEEE---EEEEEe---CCCcEEEEECCCC--EEEEEECCCchhhhhhhccCCcEEE
Confidence 66778777765433221110 11100 011221 3344444444444 4667788877644 34333233333
Q ss_pred e--eecCCEEEE
Q 008927 406 I--TLGNDCLFV 415 (548)
Q Consensus 406 ~--s~d~~~l~~ 415 (548)
+ .+++..++.
T Consensus 285 ~~~~p~~~~l~s 296 (312)
T 4ery_A 285 TACHPTENIIAS 296 (312)
T ss_dssp EEECSSSSEEEE
T ss_pred EeecCcCCceEE
Confidence 3 455655443
No 66
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.86 E-value=4.7e-07 Score=88.80 Aligned_cols=236 Identities=14% Similarity=0.112 Sum_probs=136.4
Q ss_pred CeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+..|.++++.|+|+...++.|+++++++ + .+.+... ......+.++|||+.++. ... ...|+++
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~--~-~~~~~~~----~~~~~~l~~~~dg~l~v~--~~~-------~~~i~~~ 95 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDG--Q-LSPEMHP----SHHQNGHCLNKQGHLIAC--SHG-------LRRLERQ 95 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTS--C-EEEEESS----CSSEEEEEECTTCCEEEE--ETT-------TTEEEEE
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCC--C-eEEEECC----CCCcceeeECCCCcEEEE--ecC-------CCeEEEE
Confidence 4578888888999987788999999987 5 5555432 123456789999985433 321 1479999
Q ss_pred ECCCCCccCcEEeeec-C----CceeeeEECCCCCEEEEEEec----------CCCCCCCCceEEEEEecCCCceeeeEE
Q 008927 227 ALNGQNIQEPKVLVSG-S----DFYAFPRMDPRGERMAWIEWH----------HPNMPWDKAELWVGYISENGDVYKRVC 291 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~-~----~~~~~p~~SPDGk~La~~~~~----------~~~~p~~~~~L~v~~~~~~g~~~~~~~ 291 (548)
|+.+|+ .+.+... . .......++|||+ |.+.... .....-....||.++.+ |+ ...
T Consensus 96 d~~~g~---~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~---~~~ 166 (296)
T 3e5z_A 96 REPGGE---WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GT---LSA 166 (296)
T ss_dssp CSTTCC---EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SC---EEE
T ss_pred cCCCCc---EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC--CC---EEE
Confidence 998887 6655422 1 1123568999997 4332110 00000013478887754 44 233
Q ss_pred EcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc-CCee---EeecccccccCCCcccccCcceeeeeecCC
Q 008927 292 VAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES-NNEV---LAIYSLDAEFSRPLWVFGINSYEIIQSHGE 367 (548)
Q Consensus 292 l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~-~g~~---~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d 367 (548)
+.... .....+.|+|||+++ +++... ..|++++++ +|+. ..+. . .....| ....+.+ +
T Consensus 167 ~~~~~----~~~~gi~~s~dg~~l-v~~~~~--~~i~~~~~~~~g~~~~~~~~~-~-~~~~~p------~~i~~d~---~ 228 (296)
T 3e5z_A 167 PIRDR----VKPNGLAFLPSGNLL-VSDTGD--NATHRYCLNARGETEYQGVHF-T-VEPGKT------DGLRVDA---G 228 (296)
T ss_dssp EECCC----SSEEEEEECTTSCEE-EEETTT--TEEEEEEECSSSCEEEEEEEE-C-CSSSCC------CSEEEBT---T
T ss_pred eecCC----CCCccEEECCCCCEE-EEeCCC--CeEEEEEECCCCcCcCCCeEe-e-CCCCCC------CeEEECC---C
Confidence 33322 334568999999965 555423 367777765 4554 2222 1 111111 1234432 4
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCCceEeecCCCceeEee---eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 368 KNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDNI---TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 368 ~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~~~---s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+ .|++.. + ..|+++|+++.....+..+.. +..+ .++++.|++... ..||+++++++++
T Consensus 229 G-~l~v~~--~--~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 229 G-LIWASA--G--DGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVRGL 289 (296)
T ss_dssp S-CEEEEE--T--TEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSCCBC
T ss_pred C-CEEEEc--C--CeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEcccccc
Confidence 4 465544 3 358889987555556655433 3322 356667766543 3799999877764
No 67
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.86 E-value=2.4e-07 Score=92.32 Aligned_cols=120 Identities=8% Similarity=0.011 Sum_probs=70.2
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCC---CceecceeeCCCCCEEEEEEecc---CCCCCCce
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEP---LVSYADGIFDPRFNRYVTVREDR---RQDALNST 220 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~---~~~~~~~~~SpDG~~i~~v~~~~---~~~~~~~~ 220 (548)
..|+++++.+++....++.|+++++.+ ++.. .+.... .+ ......+.|||||+.|++...+. .+......
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t--~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 124 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDT--CKNTFHANLSS-VPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 124 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTT--TEEEEEEESCC-STTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCC--CcEEEEEEccc-ccccccccccceEECCCCCEEEEEcccccccccccccCC
Confidence 357777888888887788999999986 5443 332110 00 11135678999999988765431 00000012
Q ss_pred eEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEec
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS 281 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~ 281 (548)
..|+++|+++++..........+.......|||||+ |+ +. . .+|+++|++
T Consensus 125 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~-~~-~--------~~i~~~d~~ 174 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY-VA-G--------PDIYKMDVK 174 (349)
T ss_dssp CEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE-EE-S--------SSEEEECTT
T ss_pred CeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE-Ec-c--------CcEEEEeCC
Confidence 589999999865211222223333344566999999 54 43 1 127777765
No 68
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.86 E-value=5.2e-06 Score=85.14 Aligned_cols=282 Identities=12% Similarity=0.107 Sum_probs=156.1
Q ss_pred CceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEEEE
Q 008927 92 GGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKH 170 (548)
Q Consensus 92 ~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~~ 170 (548)
..+.++| |+.++.... +|...+|..... +........ .+. .-..|+++++.|+... .++.|.+.
T Consensus 60 ~~~~~s~~g~~l~~~~~----d~~v~i~d~~~~---~~~~~~~~~-~~~------~~~~~~~~~~~l~~~~-~dg~i~iw 124 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARL----DGHDFLFNTIIR---DGSKMLKRA-DYT------AVDTAKLQMRRFILGT-TEGDIKVL 124 (420)
T ss_dssp TTCEEEEEETTEEEEEE----TTEEEEEECCSE---ETTTTSCSC-CEE------EEEEECSSSCEEEEEE-TTSCEEEE
T ss_pred cceeeeecCCeEEEEEc----CCcEEEEEeccc---ceeeEEecC-Cce------EEEEEecCCCEEEEEE-CCCCEEEE
Confidence 3678899 888877653 466667765332 222222111 110 0113555666666654 56778888
Q ss_pred eCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeE
Q 008927 171 SIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPR 250 (548)
Q Consensus 171 ~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~ 250 (548)
++.. ++...+... ....+..+.|+|||+.|+....+ ..|.++|+.+++. ...+......+....
T Consensus 125 d~~~--~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~d---------~~i~iwd~~~~~~--~~~~~~h~~~v~~~~ 188 (420)
T 3vl1_A 125 DSNF--NLQREIDQA---HVSEITKLKFFPSGEALISSSQD---------MQLKIWSVKDGSN--PRTLIGHRATVTDIA 188 (420)
T ss_dssp CTTS--CEEEEETTS---SSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCC--CEEEECCSSCEEEEE
T ss_pred eCCC--cceeeeccc---ccCccEEEEECCCCCEEEEEeCC---------CeEEEEeCCCCcC--ceEEcCCCCcEEEEE
Confidence 8876 555444322 12356678899999987765433 3688999998762 445554455577889
Q ss_pred ECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCC-C-C------------------cccCCcCceECc
Q 008927 251 MDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD-P-T------------------IVESPTEPKWSS 310 (548)
Q Consensus 251 ~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~-~-~------------------~~~~~~~~~wsp 310 (548)
|+|||+.|+.... ...|.+.|+.. ++. ...+.... . . ....+..+.|+|
T Consensus 189 ~~~~~~~l~s~~~--------d~~v~iwd~~~-~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 189 IIDRGRNVLSASL--------DGTIRLWECGT-GTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp EETTTTEEEEEET--------TSCEEEEETTT-TEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred EcCCCCEEEEEcC--------CCcEEEeECCC-Cce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 9999998885542 23577777763 331 12221100 0 0 003456688999
Q ss_pred CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCC
Q 008927 311 KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (548)
Q Consensus 311 DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~ 390 (548)
||++++.... +| .|..+|+.+++....... ....+ .....|.| +++.++++...++ .|+++|+.+
T Consensus 258 ~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~--~~~~~-----v~~~~~~~---~~~~~l~~g~~dg--~i~vwd~~~ 322 (420)
T 3vl1_A 258 YGKYVIAGHV-SG--VITVHNVFSKEQTIQLPS--KFTCS-----CNSLTVDG---NNANYIYAGYENG--MLAQWDLRS 322 (420)
T ss_dssp TTEEEEEEET-TS--CEEEEETTTCCEEEEECC--TTSSC-----EEEEEECS---SCTTEEEEEETTS--EEEEEETTC
T ss_pred CCCEEEEEcC-CC--eEEEEECCCCceeEEccc--ccCCC-----ceeEEEeC---CCCCEEEEEeCCC--eEEEEEcCC
Confidence 9995555544 44 366777766654322211 11111 12245554 5653555665555 466678877
Q ss_pred Cc--eEeecC-CCceeEee-eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 391 HS--LSLLDI-PFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 391 g~--~~~l~~-~~~~~~~~-s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
++ +..+.. ....+..+ .+++ .++++++. -..|.++++...
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~---d~~v~iw~~~~~ 366 (420)
T 3vl1_A 323 PECPVGEFLINEGTPINNVYFAAG-ALFVSSGF---DTSIKLDIISDP 366 (420)
T ss_dssp TTSCSEEEEESTTSCEEEEEEETT-EEEEEETT---TEEEEEEEECCT
T ss_pred CcCchhhhhccCCCCceEEEeCCC-CEEEEecC---CccEEEEeccCC
Confidence 64 344443 22334444 4444 44444432 356777776553
No 69
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.85 E-value=9.7e-07 Score=86.91 Aligned_cols=228 Identities=12% Similarity=0.162 Sum_probs=129.6
Q ss_pred CeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
|..|.++++.|+|++...++|+++++++ ++.+.+... .....+.++|||+.++. .. ..|+++
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~--~~~~~~~~~-----~~~~~i~~~~dG~l~v~--~~---------~~l~~~ 78 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFT--KQVQRVTMD-----APVSSVALRQSGGYVAT--IG---------TKFCAL 78 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTT--CCEEEEECS-----SCEEEEEEBTTSSEEEE--ET---------TEEEEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCC--CcEEEEeCC-----CceEEEEECCCCCEEEE--EC---------CeEEEE
Confidence 4578877889999998888999999987 555444322 23556789999994333 22 369999
Q ss_pred ECCCCCccCcEEeeecC-----CceeeeEECCCCCEEEEEEecCCCC----CCCCceEEEEEecCCCceeeeEEEcCCCC
Q 008927 227 ALNGQNIQEPKVLVSGS-----DFYAFPRMDPRGERMAWIEWHHPNM----PWDKAELWVGYISENGDVYKRVCVAGFDP 297 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~~-----~~~~~p~~SPDGk~La~~~~~~~~~----p~~~~~L~v~~~~~~g~~~~~~~l~~~~~ 297 (548)
|+++++ .+.+.... .......++|||+ |.+..+..... .-....||.++.+ |++ .......
T Consensus 79 d~~~g~---~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~--g~~--~~~~~~~-- 148 (297)
T 3g4e_A 79 NWKEQS---AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD--HHV--KKYFDQV-- 148 (297)
T ss_dssp ETTTTE---EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT--SCE--EEEEEEE--
T ss_pred ECCCCc---EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC--CCE--EEEeecc--
Confidence 999887 66665321 1234567999998 44444322110 0123467777653 442 1222221
Q ss_pred CcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEec--cCCeeE--e-ecccccccCCCcccccCcceeeeeecCCCCEE
Q 008927 298 TIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIE--SNNEVL--A-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLI 371 (548)
Q Consensus 298 ~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~--~~g~~~--~-l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l 371 (548)
.....+.|+|||+ ||+.... .+ .|++++. ++|+.. + +.........| ....+.+ + +.|
T Consensus 149 ---~~pngi~~spdg~~lyv~~~~-~~--~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p------~g~~~d~---~-G~l 212 (297)
T 3g4e_A 149 ---DISNGLDWSLDHKIFYYIDSL-SY--SVDAFDYDLQTGQISNRRSVYKLEKEEQIP------DGMCIDA---E-GKL 212 (297)
T ss_dssp ---SBEEEEEECTTSCEEEEEEGG-GT--EEEEEEECTTTCCEEEEEEEEECCGGGCEE------EEEEEBT---T-SCE
T ss_pred ---ccccceEEcCCCCEEEEecCC-CC--cEEEEeccCCCCcccCcEEEEECCCCCCCC------CeeEECC---C-CCE
Confidence 2235689999999 5554433 33 4666654 566542 1 21110000111 1133431 4 456
Q ss_pred EEEEEeCCeEEEEEEECCCCce-EeecCCCceeEee--e-ecCCEEEEEEecC
Q 008927 372 ACSYRQNGRSYLGILDDFGHSL-SLLDIPFTDIDNI--T-LGNDCLFVEGASG 420 (548)
Q Consensus 372 ~~~~~~~g~~~L~~~dl~~g~~-~~l~~~~~~~~~~--s-~d~~~l~~~~ss~ 420 (548)
++....+ ..|+++|+++|+. ..+..+...+..+ . ++++.||++....
T Consensus 213 wva~~~~--~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 213 WVACYNG--GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEEETT--TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEEcCC--CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 5544333 3588999987764 4555553333333 4 6778888777643
No 70
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.85 E-value=7e-07 Score=95.96 Aligned_cols=213 Identities=13% Similarity=0.124 Sum_probs=124.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|++++..|+... .++.|.+.+..+ .....+... ...+..+.|+|||+.|+....+ ..|.++|.
T Consensus 351 ~~s~~g~~l~~~~-~dg~v~~~~~~~--~~~~~~~~~----~~~v~~~~~s~dg~~l~~~~~d---------~~v~~~~~ 414 (577)
T 2ymu_A 351 AFSPDGQTIASAS-DDKTVKLWNRNG--QLLQTLTGH----SSSVRGVAFSPDGQTIASASDD---------KTVKLWNR 414 (577)
T ss_dssp EECTTSSEEEEEE-TTSEEEEEETTC--CEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SEEEEECT
T ss_pred EECCCCCEEEEEe-CCCEEEEEcCCC--CEEEEecCC----CCCeEEEEECCCCCEEEEEeCC---------CEEEEEeC
Confidence 4666777776654 456777777664 334455443 2345667899999988775433 35777786
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+.. .+.+......+....||||++.|+.... ...|.+.+++ ++ ....+.+.. ..+....|
T Consensus 415 ~~~~---~~~~~~~~~~v~~~~~s~d~~~l~~~~~--------d~~v~~w~~~--~~--~~~~~~~~~----~~v~~~~~ 475 (577)
T 2ymu_A 415 NGQL---LQTLTGHSSSVWGVAFSPDDQTIASASD--------DKTVKLWNRN--GQ--LLQTLTGHS----SSVRGVAF 475 (577)
T ss_dssp TCCE---EEEEECCSSCEEEEEECTTSSEEEEEET--------TSEEEEEETT--SC--EEEEEECCS----SCEEEEEE
T ss_pred CCCE---EEEecCCCCCeEEEEECCCCCEEEEEcC--------CCEEEEEECC--CC--EEEEEcCCC----CCEEEEEE
Confidence 5543 4555544455667789999999885542 3467888865 33 233444433 45677899
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEEC
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl 388 (548)
+|||++++.... ++ .|..++..+...+.+..... ......|+| +++.| ++...++. |.++|.
T Consensus 476 spd~~~las~~~-d~--~i~iw~~~~~~~~~~~~h~~---------~v~~l~~s~---dg~~l-~s~~~dg~--v~lwd~ 537 (577)
T 2ymu_A 476 SPDGQTIASASD-DK--TVKLWNRNGQLLQTLTGHSS---------SVRGVAFSP---DGQTI-ASASDDKT--VKLWNR 537 (577)
T ss_dssp CTTSCEEEEEET-TS--EEEEEETTSCEEEEEECCSS---------CEEEEEECT---TSSCE-EEEETTSE--EEEECT
T ss_pred cCCCCEEEEEeC-CC--EEEEEcCCCCEEEEEeCCCC---------CEEEEEEcC---CCCEE-EEEECcCE--EEEEeC
Confidence 999995555444 44 45666764433444432111 112245654 66555 45555664 555676
Q ss_pred CCCceEeecCCCceeEee--eecCCEEE
Q 008927 389 FGHSLSLLDIPFTDIDNI--TLGNDCLF 414 (548)
Q Consensus 389 ~~g~~~~l~~~~~~~~~~--s~d~~~l~ 414 (548)
.+..+..+......+..+ ++|++.|+
T Consensus 538 ~~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 538 NGQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 544445554433345444 67777654
No 71
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.85 E-value=3.7e-07 Score=95.44 Aligned_cols=252 Identities=8% Similarity=0.053 Sum_probs=141.3
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCC--CCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSID--SKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~--~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|++++..|+++...++.|.+.++. + ++. +.+.... .......+.|+|||+.|+....+ ..++.
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~~---------g~v~~ 175 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTS--KNVLKLRKRFC--FSKRPNAISIAEDDTTVIIADKF---------GDVYS 175 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSS--SSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEETT---------SEEEE
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCC--Cceeeeeeccc--CCCCceEEEEcCCCCEEEEEeCC---------CcEEE
Confidence 5777888887777667766666665 4 333 4443110 01345678899999988775322 46899
Q ss_pred EECCCCCcc--CcEEeeecCCceeeeEECCC---CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE-EcCCCCCc
Q 008927 226 IALNGQNIQ--EPKVLVSGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-VAGFDPTI 299 (548)
Q Consensus 226 idl~~g~~~--~~~~L~~~~~~~~~p~~SPD---Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~-l~~~~~~~ 299 (548)
+++.+++.. ....+......+....|+|| |+.|+.... ...|++.++.. ++. ... +.+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--------d~~i~vwd~~~-~~~--~~~~~~~h~--- 241 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--------DEHIKISHYPQ-CFI--VDKWLFGHK--- 241 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--------TSCEEEEEESC-TTC--EEEECCCCS---
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--------CCcEEEEECCC-Cce--eeeeecCCC---
Confidence 999887621 01133433445667799999 887764442 24688889874 431 222 33332
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeeccccc---ccC--------------CCcccccCcceeee
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDA---EFS--------------RPLWVFGINSYEII 362 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~---d~~--------------~p~w~~~~~~~~~~ 362 (548)
..+..+.|+ ||++++.... ++ .|.++|+.+++......... .+. ..........+.+.
T Consensus 242 -~~v~~~~~s-d~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 242 -HFVSSICCG-KDYLLLSAGG-DD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp -SCEEEEEEC-STTEEEEEES-SS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred -CceEEEEEC-CCCEEEEEeC-CC--eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 457788999 9995555443 33 57778887877533221100 000 00011122234555
Q ss_pred eecCCCCEEEEEEEeCCeEEEEEE-ECCCCceEe---ecCCCceeEeeeecCCEEEEEEecCCCCC------eEEEEEcC
Q 008927 363 QSHGEKNLIACSYRQNGRSYLGIL-DDFGHSLSL---LDIPFTDIDNITLGNDCLFVEGASGVEPS------SVAKVTLD 432 (548)
Q Consensus 363 ~~~~d~~~l~~~~~~~g~~~L~~~-dl~~g~~~~---l~~~~~~~~~~s~d~~~l~~~~ss~~~p~------~l~~~d~~ 432 (548)
| +++.|++....++.-.||.+ +...+.++. +..+ ..+..+....+.+++...+...+. .+|.++.+
T Consensus 317 ~---~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 317 K---NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp S---SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred C---CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 4 66666655435555555555 223333332 3333 334455333355666666655554 88888877
Q ss_pred CCce
Q 008927 433 DHKL 436 (548)
Q Consensus 433 ~~~~ 436 (548)
++++
T Consensus 393 ~~~~ 396 (450)
T 2vdu_B 393 ENSF 396 (450)
T ss_dssp TTEE
T ss_pred CCeE
Confidence 7654
No 72
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.84 E-value=4.2e-07 Score=89.12 Aligned_cols=251 Identities=10% Similarity=0.018 Sum_probs=141.2
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
.....|.++| |+.++|+... .+ .|++++..+ ..+.+......+ -+..+.++| .|+.....++.|
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~---~~--~i~~~~~~~--~~~~~~~~~~~~-------~~l~~~~dg-~l~v~~~~~~~i 92 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVR---QN--RTWAWSDDG--QLSPEMHPSHHQ-------NGHCLNKQG-HLIACSHGLRRL 92 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGG---GT--EEEEEETTS--CEEEEESSCSSE-------EEEEECTTC-CEEEEETTTTEE
T ss_pred ccccCCeEeCCCCEEEEEeCC---CC--EEEEEECCC--CeEEEECCCCCc-------ceeeECCCC-cEEEEecCCCeE
Confidence 4556799999 7779999743 23 355555542 233332211000 011233333 466666556789
Q ss_pred EEEeCCCCCCCceecCCCCCCC-CceecceeeCCCCCEEEEEEec-c--------CCCCCCceeEEEEEECCCCCccCcE
Q 008927 168 YKHSIDSKDSSPLPITPDYGEP-LVSYADGIFDPRFNRYVTVRED-R--------RQDALNSTTEIVAIALNGQNIQEPK 237 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~~~~~~-~~~~~~~~~SpDG~~i~~v~~~-~--------~~~~~~~~~~l~~idl~~g~~~~~~ 237 (548)
+++++.. ++.+.+....... .....++.++|||+. ++.... . ..........||.++.+ ++ .+
T Consensus 93 ~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~---~~ 165 (296)
T 3e5z_A 93 ERQREPG--GEWESIADSFEGKKLNSPNDVCLAPDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT---LS 165 (296)
T ss_dssp EEECSTT--CCEEEEECEETTEECCCCCCEEECTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC---EE
T ss_pred EEEcCCC--CcEEEEeeccCCCCCCCCCCEEECCCCCE-EEECCccccccccccccccccCCCcEEEEECCC-CC---EE
Confidence 9999865 5666554321000 113456889999974 332110 0 00000113589999988 65 56
Q ss_pred EeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCce-eeeEEEcCCCCCcccCCcCceECcCCcEEE
Q 008927 238 VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEPKWSSKGELFF 316 (548)
Q Consensus 238 ~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~-~~~~~l~~~~~~~~~~~~~~~wspDG~L~~ 316 (548)
.+...........|||||+.| +... ....|++++++.+|++ ...+.+ ... . .....+.+++||+||+
T Consensus 166 ~~~~~~~~~~gi~~s~dg~~l-v~~~-------~~~~i~~~~~~~~g~~~~~~~~~-~~~-~--~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 166 APIRDRVKPNGLAFLPSGNLL-VSDT-------GDNATHRYCLNARGETEYQGVHF-TVE-P--GKTDGLRVDAGGLIWA 233 (296)
T ss_dssp EEECCCSSEEEEEECTTSCEE-EEET-------TTTEEEEEEECSSSCEEEEEEEE-CCS-S--SCCCSEEEBTTSCEEE
T ss_pred EeecCCCCCccEEECCCCCEE-EEeC-------CCCeEEEEEECCCCcCcCCCeEe-eCC-C--CCCCeEEECCCCCEEE
Confidence 665554445667899999988 5542 1357999998745654 333444 211 1 3456788999999776
Q ss_pred EEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 317 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 317 ~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
.. . ..|+++++++.....+..... + ....+. .++++.|+++. . ..|+++++.+++++
T Consensus 234 ~~-~----~~v~~~~~~g~~~~~~~~~~~----~------~~~~f~--~~d~~~L~v~t-~---~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 234 SA-G----DGVHVLTPDGDELGRVLTPQT----T------SNLCFG--GPEGRTLYMTV-S---TEFWSIETNVRGLE 290 (296)
T ss_dssp EE-T----TEEEEECTTSCEEEEEECSSC----C------CEEEEE--STTSCEEEEEE-T---TEEEEEECSCCBCC
T ss_pred Ec-C----CeEEEECCCCCEEEEEECCCC----c------eeEEEE--CCCCCEEEEEc-C---CeEEEEEccccccc
Confidence 66 2 258899986444444431110 1 123332 01556676554 2 26899998877654
No 73
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.80 E-value=2.4e-06 Score=91.78 Aligned_cols=250 Identities=10% Similarity=0.004 Sum_probs=138.8
Q ss_pred eeEE----ECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCC--------CCCceecceeeCCCCCEEEEEEeccCCCC
Q 008927 149 AFRI----FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYG--------EPLVSYADGIFDPRFNRYVTVREDRRQDA 216 (548)
Q Consensus 149 ~~~~----~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~--------~~~~~~~~~~~SpDG~~i~~v~~~~~~~~ 216 (548)
+|++ +|+.|+..+..++.|.++|..+ +++.+...... .+..+.....+|||++.+++....
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t--~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~----- 300 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGET--LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE----- 300 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTT--CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEeccc--cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----
Confidence 5777 8888877776678899999876 55533221100 001145567899999876554221
Q ss_pred CCceeEEEEEECCCCCccCcE--EeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC
Q 008927 217 LNSTTEIVAIALNGQNIQEPK--VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG 294 (548)
Q Consensus 217 ~~~~~~l~~idl~~g~~~~~~--~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~ 294 (548)
...|+++|+.+++. .. .+. ...+.....|||||++|+ ++... ...|.++|+++ +++. ..+..
T Consensus 301 ---~g~i~vvd~~~~~~--l~~~~i~-~~~~~~~~~~spdg~~l~-va~~~------~~~v~v~D~~t-g~l~--~~i~~ 364 (543)
T 1nir_A 301 ---TGKVLLVNYKDIDN--LTVTSIG-AAPFLHDGGWDSSHRYFM-TAANN------SNKVAVIDSKD-RRLS--ALVDV 364 (543)
T ss_dssp ---TTEEEEEECTTSSS--CEEEEEE-CCSSCCCEEECTTSCEEE-EEEGG------GTEEEEEETTT-TEEE--EEEEC
T ss_pred ---CCeEEEEEecCCCc--ceeEEec-cCcCccCceECCCCCEEE-EEecC------CCeEEEEECCC-CeEE--Eeecc
Confidence 24799999988651 22 222 233455668999999875 44222 35789999884 6532 22322
Q ss_pred CCCCcccCCcCce-ECcCCc-EEEEEeCCCCeeeEEEEeccC-------CeeEeecccccccCCCcccccCcceeeeeec
Q 008927 295 FDPTIVESPTEPK-WSSKGE-LFFVTDRKNGFWNLHKWIESN-------NEVLAIYSLDAEFSRPLWVFGINSYEIIQSH 365 (548)
Q Consensus 295 ~~~~~~~~~~~~~-wspDG~-L~~~sd~~~g~~~Ly~~d~~~-------g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~ 365 (548)
.... ....... ++||+. +|+....+++ .|-+++.++ .+..+..+.. +...+ ...+.|
T Consensus 365 g~~p--h~g~g~~~~~p~~g~~~~s~~~~d~--~V~v~d~~~~~~~~~~~~~v~~l~~~---g~~~~-----~v~~~p-- 430 (543)
T 1nir_A 365 GKTP--HPGRGANFVHPKYGPVWSTSHLGDG--SISLIGTDPKNHPQYAWKKVAELQGQ---GGGSL-----FIKTHP-- 430 (543)
T ss_dssp SSSB--CCTTCEEEEETTTEEEEEEEBSSSS--EEEEEECCTTTCTTTBTSEEEEEECS---CSCCC-----CEECCT--
T ss_pred CCCC--CCCCCcccCCCCCccEEEeccCCCc--eEEEEEeCCCCCchhcCeEEEEEEcC---CCCce-----EEEcCC--
Confidence 1100 1111223 368855 6554433233 466666655 3332222111 01111 133443
Q ss_pred CCCCEEEEEEE--eC--CeEEEEEEECCCCceE--eec--------CCCceeEe--eeecCCEEEEEEecC-CCCCeEEE
Q 008927 366 GEKNLIACSYR--QN--GRSYLGILDDFGHSLS--LLD--------IPFTDIDN--ITLGNDCLFVEGASG-VEPSSVAK 428 (548)
Q Consensus 366 ~d~~~l~~~~~--~~--g~~~L~~~dl~~g~~~--~l~--------~~~~~~~~--~s~d~~~l~~~~ss~-~~p~~l~~ 428 (548)
+++.|+.... .+ ....|.++|+++++.. .|. .+...+.. ++++|+.+++..-+. .....|.+
T Consensus 431 -dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v 509 (543)
T 1nir_A 431 -KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV 509 (543)
T ss_dssp -TCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEE
T ss_pred -CCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEE
Confidence 7777765431 11 1347889999887643 331 11122222 378999988876432 34689999
Q ss_pred EEcCCCce
Q 008927 429 VTLDDHKL 436 (548)
Q Consensus 429 ~d~~~~~~ 436 (548)
+|.++++.
T Consensus 510 ~D~~t~~~ 517 (543)
T 1nir_A 510 VDDKTLKL 517 (543)
T ss_dssp EETTTTEE
T ss_pred EECCCceE
Confidence 99988875
No 74
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.78 E-value=4e-06 Score=85.58 Aligned_cols=252 Identities=7% Similarity=-0.038 Sum_probs=137.9
Q ss_pred CeeeEEECCEEEEEeC---------CCCeEEEEeCCCCCCCce-ecCCC-CCCC--CceecceeeCCCCCEEEEEEeccC
Q 008927 147 GGAFRIFGDTVIFSNY---------KDQRLYKHSIDSKDSSPL-PITPD-YGEP--LVSYADGIFDPRFNRYVTVREDRR 213 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~---------~~~~Ly~~~~~~~~~~~~-~lT~~-~~~~--~~~~~~~~~SpDG~~i~~v~~~~~ 213 (548)
+..++||++.||..+. .++.|.++|+.+ .+.. .+... .... ...-..+.|||||++|++.....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t--~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~- 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT--FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA- 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC--CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-
Confidence 4578899999999863 245788999875 3332 22111 0000 00123578999999987753321
Q ss_pred CCCCCceeEEEEEECCCCCccCcEEe-eecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE-
Q 008927 214 QDALNSTTEIVAIALNGQNIQEPKVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC- 291 (548)
Q Consensus 214 ~~~~~~~~~l~~idl~~g~~~~~~~L-~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~- 291 (548)
.+.|.++| ++++ .... ..-... ..+.|+|++.++.. . + ...+.+++. . ++......
T Consensus 147 ------~~~v~viD-~t~~---~~~~~i~~~~~---~~~~~~~~~~~~~~-~-~-----dg~~~~vd~-~-g~~~~~~~~ 204 (373)
T 2mad_H 147 ------GPAVGLVV-QGGS---SDDQLLSSPTC---YHIHPGAPSTFYLL-C-A-----QGGLAKTDH-A-GGAAGAGLV 204 (373)
T ss_pred ------CCeEEEEE-CCCC---EEeEEcCCCce---EEEEeCCCceEEEE-c-C-----CCCEEEEEC-C-CcEEEEEec
Confidence 25799999 9887 3322 322222 34567777654332 1 1 234566666 3 33211100
Q ss_pred ---EcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeeccc---ccccCCCcccccCc-ceeeee
Q 008927 292 ---VAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSL---DAEFSRPLWVFGIN-SYEIIQ 363 (548)
Q Consensus 292 ---l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~---~~d~~~p~w~~~~~-~~~~~~ 363 (548)
..+.. .....+.+++++. ++|++.. + .++.+|..++..+.+... ........|..+.. .+.+.+
T Consensus 205 ~~~~~~~~----p~~~~~~~~~~~~~~~~~~~~--~--~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~ 276 (373)
T 2mad_H 205 GAMLTAAQ----NLLTQPAQANKSGRIVWPVYS--G--KILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK 276 (373)
T ss_pred cccccCCc----ceeecceeEecCCEEEEEcCC--c--eEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence 11111 1123467788877 7877743 3 799999876643322210 00001123333221 133443
Q ss_pred ecCCCCEEEEEEEeC-------CeEEEEEEECCCCce-EeecCCCcee-EeeeecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 364 SHGEKNLIACSYRQN-------GRSYLGILDDFGHSL-SLLDIPFTDI-DNITLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 364 ~~~d~~~l~~~~~~~-------g~~~L~~~dl~~g~~-~~l~~~~~~~-~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
++++||...... ....|+++|++++++ +.+..+.... -.+++|++.++++.+. ....|.++|++++
T Consensus 277 ---d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~--~~~~V~ViD~~t~ 351 (373)
T 2mad_H 277 ---SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSA--GTEVLHIYDAGAG 351 (373)
T ss_pred ---CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcC--CCCeEEEEECCCC
Confidence 778887765421 235799999998876 5665433211 1347888866666542 2368999999887
Q ss_pred ce
Q 008927 435 KL 436 (548)
Q Consensus 435 ~~ 436 (548)
+.
T Consensus 352 ~v 353 (373)
T 2mad_H 352 DQ 353 (373)
T ss_pred CE
Confidence 64
No 75
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.76 E-value=3.6e-06 Score=84.83 Aligned_cols=239 Identities=10% Similarity=-0.004 Sum_probs=131.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|+++ +.|+ +...++.|.+.++.. ++. ..+..........+..+.|+|||+.|+....+ ..|.++|
T Consensus 89 ~~s~d-~~l~-~~s~dg~v~lWd~~~--~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---------~~i~iwd 155 (344)
T 4gqb_B 89 TWVGE-RGIL-VASDSGAVELWELDE--NETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---------ICIKVWD 155 (344)
T ss_dssp EEETT-TEEE-EEETTSEEEEEEECT--TSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---------SCEEEEE
T ss_pred EEeCC-CeEE-EEECCCEEEEEeccC--CCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---------CeEEEEE
Confidence 45544 3454 334567666667765 332 22210000001235677899999988775433 3588889
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+.+++. .+.+....+.+....|+||++.++..... ...|.+.|+.. ++. ...+...... ..+....
T Consensus 156 ~~~~~~--~~~~~~h~~~V~~~~~~~~~~~~l~s~s~-------D~~v~iwd~~~-~~~--~~~~~~~~~~--~~~~~~~ 221 (344)
T 4gqb_B 156 LAQQVV--LSSYRAHAAQVTCVAASPHKDSVFLSCSE-------DNRILLWDTRC-PKP--ASQIGCSAPG--YLPTSLA 221 (344)
T ss_dssp TTTTEE--EEEECCCSSCEEEEEECSSCTTEEEEEET-------TSCEEEEETTS-SSC--EEECC----C--CCEEEEE
T ss_pred CCCCcE--EEEEcCcCCceEEEEecCCCCCceeeecc-------ccccccccccc-cce--eeeeecceee--ccceeee
Confidence 998871 23333334456777899999866534321 24588889874 431 2222211101 3456788
Q ss_pred ECcCCc-EEEEEeCCCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 308 WSSKGE-LFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 308 wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
|+|++. +++.... +| .|.++|+.+++.. .+... . .. .....|.| ++..++++...++. |++
T Consensus 222 ~~p~~~~~l~sg~~-dg--~v~~wd~~~~~~~~~~~~h----~--~~---v~~v~fsp---~g~~~lasgs~D~~--i~v 284 (344)
T 4gqb_B 222 WHPQQSEVFVFGDE-NG--TVSLVDTKSTSCVLSSAVH----S--QC---VTGLVFSP---HSVPFLASLSEDCS--LAV 284 (344)
T ss_dssp ECSSCTTEEEEEET-TS--EEEEEESCC--CCEEEECC----S--SC---EEEEEECS---SSSCCEEEEETTSC--EEE
T ss_pred ecCCCCcceEEecc-CC--cEEEEECCCCcEEEEEcCC----C--CC---EEEEEEcc---CCCeEEEEEeCCCe--EEE
Confidence 999766 7666554 44 4666787776542 23211 1 11 12245654 66666666666665 556
Q ss_pred EECCCCceEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 386 LDDFGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 386 ~dl~~g~~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
+|+.++++..+......+..+ +++++.+++.++.. ..|.+.++.+.
T Consensus 285 wd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D---~~v~~w~v~~~ 332 (344)
T 4gqb_B 285 LDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWD---HQVVHHVVPTE 332 (344)
T ss_dssp ECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETT---SCEEEEECCC-
T ss_pred EECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCC---CeEEEEECCCC
Confidence 688888766554333345554 67887776666532 35666666443
No 76
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.76 E-value=3.9e-06 Score=90.03 Aligned_cols=227 Identities=13% Similarity=0.130 Sum_probs=130.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|++++..|+... .++.|.+.++++ ...+.+... ........++|||+.|+....+ ..|.++|.
T Consensus 310 ~~~~~~~~l~t~~-~d~~i~~w~~~~--~~~~~~~~~----~~~v~~~~~s~~g~~l~~~~~d---------g~v~~~~~ 373 (577)
T 2ymu_A 310 AFSPDGQTIASAS-DDKTVKLWNRNG--QHLQTLTGH----SSSVWGVAFSPDGQTIASASDD---------KTVKLWNR 373 (577)
T ss_dssp EECTTSSEEEEEE-TTSCEEEEETTS--CEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEET
T ss_pred EECCCCCEEEEEe-CCCeEEEEeCCC--CeeEEEeCC----CCCEEEEEECCCCCEEEEEeCC---------CEEEEEcC
Confidence 4556666665544 456666667765 555555543 2245567899999998775433 25667776
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+.. ...+......+....|||||++|+.... ...|.+.+.. ++. ...+.+.. ..+....|
T Consensus 374 ~~~~---~~~~~~~~~~v~~~~~s~dg~~l~~~~~--------d~~v~~~~~~--~~~--~~~~~~~~----~~v~~~~~ 434 (577)
T 2ymu_A 374 NGQL---LQTLTGHSSSVRGVAFSPDGQTIASASD--------DKTVKLWNRN--GQL--LQTLTGHS----SSVWGVAF 434 (577)
T ss_dssp TCCE---EEEEECCSSCEEEEEECTTSSCEEEEET--------TSEEEEECTT--CCE--EEEEECCS----SCEEEEEE
T ss_pred CCCE---EEEecCCCCCeEEEEECCCCCEEEEEeC--------CCEEEEEeCC--CCE--EEEecCCC----CCeEEEEE
Confidence 5544 4455544445667789999999885542 2467777754 332 33344433 45677899
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEEC
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl 388 (548)
+||+++++.... ++ .|..+++.+...+.+..... + .....+.| +++.| ++...++. |.+.|.
T Consensus 435 s~d~~~l~~~~~-d~--~v~~w~~~~~~~~~~~~~~~----~-----v~~~~~sp---d~~~l-as~~~d~~--i~iw~~ 496 (577)
T 2ymu_A 435 SPDDQTIASASD-DK--TVKLWNRNGQLLQTLTGHSS----S-----VRGVAFSP---DGQTI-ASASDDKT--VKLWNR 496 (577)
T ss_dssp CTTSSEEEEEET-TS--EEEEEETTSCEEEEEECCSS----C-----EEEEEECT---TSCEE-EEEETTSE--EEEEET
T ss_pred CCCCCEEEEEcC-CC--EEEEEECCCCEEEEEcCCCC----C-----EEEEEEcC---CCCEE-EEEeCCCE--EEEEcC
Confidence 999995555443 44 45566765544444432111 1 11244554 55544 45555554 555676
Q ss_pred CCCceEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 389 FGHSLSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 389 ~~g~~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
.+..++.+......+..+ +++++.|+ .++. -..|.++|..
T Consensus 497 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~-s~~~---dg~v~lwd~~ 538 (577)
T 2ymu_A 497 NGQLLQTLTGHSSSVRGVAFSPDGQTIA-SASD---DKTVKLWNRN 538 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSSCEE-EEET---TSEEEEECTT
T ss_pred CCCEEEEEeCCCCCEEEEEEcCCCCEEE-EEEC---cCEEEEEeCC
Confidence 544455555433445544 67777654 3332 2467788864
No 77
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.72 E-value=2.4e-06 Score=84.02 Aligned_cols=215 Identities=10% Similarity=0.051 Sum_probs=121.1
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
-...|.|+| ++.+||+... .+ .|++++..+ +..+.+... ..+ ++..+.++|+ |+... +..|+
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~---~~--~i~~~d~~~-~~~~~~~~~-----~~~---~~i~~~~dG~-l~v~~--~~~l~ 76 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIP---AK--KVCRWDSFT-KQVQRVTMD-----APV---SSVALRQSGG-YVATI--GTKFC 76 (297)
T ss_dssp BEEEEEEETTTTEEEEEETT---TT--EEEEEETTT-CCEEEEECS-----SCE---EEEEEBTTSS-EEEEE--TTEEE
T ss_pred cccCCeEECCCCEEEEEECC---CC--EEEEEECCC-CcEEEEeCC-----Cce---EEEEECCCCC-EEEEE--CCeEE
Confidence 345789999 8899998743 23 466665542 223222111 111 1123444455 55544 46899
Q ss_pred EEeCCCCCCCceecCCCCC-CCCceecceeeCCCCCEEEEEEeccCCC---CCCceeEEEEEECCCCCccCcEEeeecCC
Q 008927 169 KHSIDSKDSSPLPITPDYG-EPLVSYADGIFDPRFNRYVTVREDRRQD---ALNSTTEIVAIALNGQNIQEPKVLVSGSD 244 (548)
Q Consensus 169 ~~~~~~~~~~~~~lT~~~~-~~~~~~~~~~~SpDG~~i~~v~~~~~~~---~~~~~~~l~~idl~~g~~~~~~~L~~~~~ 244 (548)
++++++ ++.+.+..... ....+..+..++|||+. ++........ .......||+++.++ + ...+.....
T Consensus 77 ~~d~~~--g~~~~~~~~~~~~~~~~~~di~~d~dG~l-~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~---~~~~~~~~~ 149 (297)
T 3g4e_A 77 ALNWKE--QSAVVLATVDNDKKNNRFNDGKVDPAGRY-FAGTMAEETAPAVLERHQGALYSLFPDH-H---VKKYFDQVD 149 (297)
T ss_dssp EEETTT--TEEEEEEECCTTCSSEEEEEEEECTTSCE-EEEEEECCSBTTBCCTTCEEEEEECTTS-C---EEEEEEEES
T ss_pred EEECCC--CcEEEEEecCCCCCCCCCCCEEECCCCCE-EEecCCcccccccccCCCcEEEEEECCC-C---EEEEeeccc
Confidence 999986 55555543211 11245677889999984 4432211100 001346899999864 4 445544433
Q ss_pred ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEec-CCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCC
Q 008927 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (548)
Q Consensus 245 ~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~-~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g 323 (548)
.-....|||||+.|++.... ...|++++++ .+|.+...+.+.... ..........+++||+||+.... .
T Consensus 150 ~pngi~~spdg~~lyv~~~~-------~~~i~~~~~d~~~G~~~~~~~~~~~~-~~~~~p~g~~~d~~G~lwva~~~-~- 219 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSL-------SYSVDAFDYDLQTGQISNRRSVYKLE-KEEQIPDGMCIDAEGKLWVACYN-G- 219 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGG-------GTEEEEEEECTTTCCEEEEEEEEECC-GGGCEEEEEEEBTTSCEEEEEET-T-
T ss_pred cccceEEcCCCCEEEEecCC-------CCcEEEEeccCCCCcccCcEEEEECC-CCCCCCCeeEECCCCCEEEEEcC-C-
Confidence 44567899999988765421 3579999985 356543333332211 00022345678899987666543 2
Q ss_pred eeeEEEEeccCCeeEe
Q 008927 324 FWNLHKWIESNNEVLA 339 (548)
Q Consensus 324 ~~~Ly~~d~~~g~~~~ 339 (548)
..|+++++++|+...
T Consensus 220 -~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 220 -GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp -TEEEEECTTTCCEEE
T ss_pred -CEEEEEcCCCceEEE
Confidence 259999998777543
No 78
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.71 E-value=4.3e-06 Score=80.73 Aligned_cols=232 Identities=12% Similarity=0.047 Sum_probs=134.8
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceec-----CCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPI-----TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG 230 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~l-----T~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~ 230 (548)
.|+|.+ .+.|+++++++ ...+.+ ... +..+...+.|+|+++.|++. ... ...|+++++++
T Consensus 3 ~l~~~~--~~~I~~~~~~g--~~~~~~~~~~~~~~---~~~~~~gi~~d~~~~~ly~~-d~~-------~~~I~~~~~~g 67 (267)
T 1npe_A 3 HLLFAQ--TGKIERLPLER--NTMKKTEAKAFLHI---PAKVIIGLAFDCVDKVVYWT-DIS-------EPSIGRASLHG 67 (267)
T ss_dssp EEEEEE--EEEEEEEEESS--SCBCGGGCEEEEEE---EEEEEEEEEEETTTTEEEEE-ETT-------TTEEEEEESSS
T ss_pred EEEEEc--CCeEEEEEecC--cccccccceeeecC---CCCcEEEEEEecCCCEEEEE-ECC-------CCEEEEEecCC
Confidence 578877 45899999987 443321 111 01234567899998887665 322 25799999998
Q ss_pred CCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceEC
Q 008927 231 QNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (548)
Q Consensus 231 g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ws 309 (548)
+. .+.+... ...-....++|++++|++... ....|+++++++ .. ....+.... .......++
T Consensus 68 ~~---~~~~~~~~~~~p~~ia~d~~~~~lyv~d~-------~~~~I~~~~~~g-~~--~~~~~~~~~----~~P~~i~vd 130 (267)
T 1npe_A 68 GE---PTTIIRQDLGSPEGIALDHLGRTIFWTDS-------QLDRIEVAKMDG-TQ--RRVLFDTGL----VNPRGIVTD 130 (267)
T ss_dssp CC---CEEEECTTCCCEEEEEEETTTTEEEEEET-------TTTEEEEEETTS-CS--CEEEECSSC----SSEEEEEEE
T ss_pred CC---cEEEEECCCCCccEEEEEecCCeEEEEEC-------CCCEEEEEEcCC-CC--EEEEEECCC----CCccEEEEe
Confidence 76 5555432 223345678999888876542 245799998863 21 122232211 234556789
Q ss_pred cCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEEC
Q 008927 310 SKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 310 pDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl 388 (548)
|++. ||+ ++.......|+++++++...+.+... ....| ..+++.+ +++.||++- .+...|+++|+
T Consensus 131 ~~~g~lyv-~~~~~~~~~I~~~~~dg~~~~~~~~~--~~~~P------~gia~d~---~~~~lyv~d--~~~~~I~~~~~ 196 (267)
T 1npe_A 131 PVRGNLYW-TDWNRDNPKIETSHMDGTNRRILAQD--NLGLP------NGLTFDA---FSSQLCWVD--AGTHRAECLNP 196 (267)
T ss_dssp TTTTEEEE-EECCSSSCEEEEEETTSCCCEEEECT--TCSCE------EEEEEET---TTTEEEEEE--TTTTEEEEEET
T ss_pred eCCCEEEE-EECCCCCcEEEEEecCCCCcEEEEEC--CCCCC------cEEEEcC---CCCEEEEEE--CCCCEEEEEec
Confidence 9766 555 44422245788888865444434321 11111 1244543 577887654 34457899998
Q ss_pred CCCceEeecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 389 FGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 389 ~~g~~~~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+++..+.+......-.+++.+++.+|+... ....|+++|.++++.
T Consensus 197 ~g~~~~~~~~~~~~P~gi~~d~~~lyva~~---~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 197 AQPGRRKVLEGLQYPFAVTSYGKNLYYTDW---KTNSVIAMDLAISKE 241 (267)
T ss_dssp TEEEEEEEEECCCSEEEEEEETTEEEEEET---TTTEEEEEETTTTEE
T ss_pred CCCceEEEecCCCCceEEEEeCCEEEEEEC---CCCeEEEEeCCCCCc
Confidence 765544432222222344567788776543 235899999887763
No 79
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.71 E-value=2.5e-06 Score=84.98 Aligned_cols=201 Identities=7% Similarity=-0.016 Sum_probs=117.9
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
..+..+.++|...++.... .++...||..... ...+.+......+. ...|+|++..|+.. ..++.|.
T Consensus 81 ~~v~~~~~~~~~~~l~s~s---~D~~i~lWd~~~~--~~~~~~~~~~~~~~-------~~~~spdg~~l~~g-~~dg~v~ 147 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSS---LDAHIRLWDLENG--KQIKSIDAGPVDAW-------TLAFSPDSQYLATG-THVGKVN 147 (321)
T ss_dssp SCEEEEEECSSSSEEEEEE---TTSEEEEEETTTT--EEEEEEECCTTCCC-------CEEECTTSSEEEEE-CTTSEEE
T ss_pred CCEEEEEECCCCCEEEEEe---CCCcEEEEECCCC--CEEEEEeCCCccEE-------EEEECCCCCEEEEE-cCCCcEE
Confidence 3455667776223333322 2466667765332 12223322221111 13677777766654 4567888
Q ss_pred EEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcE-EeeecCCce
Q 008927 169 KHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPK-VLVSGSDFY 246 (548)
Q Consensus 169 ~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~-~L~~~~~~~ 246 (548)
+.++.. ++. ..+... ......+.|+|||+.|+....+ ..|.++|+.+++ .. .+......+
T Consensus 148 i~~~~~--~~~~~~~~~~----~~~v~~~~~spdg~~lasg~~d---------g~i~iwd~~~~~---~~~~~~~h~~~v 209 (321)
T 3ow8_A 148 IFGVES--GKKEYSLDTR----GKFILSIAYSPDGKYLASGAID---------GIINIFDIATGK---LLHTLEGHAMPI 209 (321)
T ss_dssp EEETTT--CSEEEEEECS----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTE---EEEEECCCSSCC
T ss_pred EEEcCC--CceeEEecCC----CceEEEEEECCCCCEEEEEcCC---------CeEEEEECCCCc---EEEEEcccCCce
Confidence 888876 433 233322 2235667899999988775433 358888999886 33 333333346
Q ss_pred eeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeee
Q 008927 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWN 326 (548)
Q Consensus 247 ~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~ 326 (548)
....|||||+.|+-.. ....|.+.|+.. ++ ....+.+.. ..+..+.|+|||++++.... ++ .
T Consensus 210 ~~l~~spd~~~l~s~s--------~dg~i~iwd~~~-~~--~~~~~~~h~----~~v~~~~~sp~~~~l~s~s~-D~--~ 271 (321)
T 3ow8_A 210 RSLTFSPDSQLLVTAS--------DDGYIKIYDVQH-AN--LAGTLSGHA----SWVLNVAFCPDDTHFVSSSS-DK--S 271 (321)
T ss_dssp CEEEECTTSCEEEEEC--------TTSCEEEEETTT-CC--EEEEECCCS----SCEEEEEECTTSSEEEEEET-TS--C
T ss_pred eEEEEcCCCCEEEEEc--------CCCeEEEEECCC-cc--eeEEEcCCC----CceEEEEECCCCCEEEEEeC-CC--c
Confidence 6789999999887433 134688889874 43 233454433 45778999999995555444 44 4
Q ss_pred EEEEeccCCeeE
Q 008927 327 LHKWIESNNEVL 338 (548)
Q Consensus 327 Ly~~d~~~g~~~ 338 (548)
|..+|+.+++..
T Consensus 272 v~iwd~~~~~~~ 283 (321)
T 3ow8_A 272 VKVWDVGTRTCV 283 (321)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEeCCCCEEE
Confidence 666677777643
No 80
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.71 E-value=1.9e-06 Score=87.16 Aligned_cols=292 Identities=10% Similarity=0.004 Sum_probs=143.5
Q ss_pred CCccCceEEcC-CCcEEEEEecCCC--CCceEEEEcCCCCCCCC-cccCCCCCCccccceeeCCeeeEEECCEEEEEeCC
Q 008927 88 SKRLGGTAVDG-HGRLIWLESRPTE--AGRGVLVKEPAKAGDEP-SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK 163 (548)
Q Consensus 88 ~~~~~~~~~sp-g~~i~~~~~~~~e--~gr~~l~~~~~~~~~~~-~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~ 163 (548)
...+..+++|| |..++--...... +|. ++..+... +.+ ..+......-...+. ..+|++++. ++... .
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~--v~~~~~~~-~~~~~~~~~~~~~~~~~V~---~~~~s~d~~-~l~~s-~ 113 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGS--IWVFKDPE-GAPNESLCTAGVQTEAGVT---DVAWVSEKG-ILVAS-D 113 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEE--EEEESSCC----CGGGCSEEEECSSCEE---EEEEETTTE-EEEEE-T
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCe--EEEEECCC-CCcceeEecccCCCCCCEE---EEEEcCCCC-EEEEE-C
Confidence 46688899999 7766554321100 233 43333221 122 222211100011111 125666554 33333 3
Q ss_pred CCeEEEEeCCCCCCCceecCCCC-CCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE-eee
Q 008927 164 DQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV-LVS 241 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~~~~lT~~~-~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~-L~~ 241 (548)
++.|.+.++.. ++...+.... ......+..+.|+|||+.|+....+ ..|.++|+.+++ ... +..
T Consensus 114 dg~v~lWd~~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---------g~v~iwd~~~~~---~~~~~~~ 179 (357)
T 4g56_B 114 SGAVELWEILE--KESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---------FSVKVWDLSQKA---VLKSYNA 179 (357)
T ss_dssp TSCEEEC----------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---------SCEEEEETTTTE---EEEEECC
T ss_pred CCEEEEeeccc--cceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---------CeEEEEECCCCc---EEEEEcC
Confidence 56666666654 3322111100 0001235567899999988765433 357888999886 333 333
Q ss_pred cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeC
Q 008927 242 GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDR 320 (548)
Q Consensus 242 ~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~ 320 (548)
....+....|+|+++.++..... ...|.+.|+.. ++. ...+...... ..+....|+|++. +++....
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~-------dg~v~~wd~~~-~~~--~~~~~~~~~~--~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGE-------DGRILLWDTRK-PKP--ATRIDFCASD--TIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEET-------TSCEEECCTTS-SSC--BCBCCCTTCC--SCEEEEEECTTSTTEEEEEES
T ss_pred CCCCEEEEEEccCCCceeeeecc-------CCceEEEECCC-Cce--eeeeeecccc--ccccchhhhhcccceEEEeec
Confidence 34456677899999755434321 24577878874 331 1112111101 3456789999976 7666554
Q ss_pred CCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCC
Q 008927 321 KNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPF 400 (548)
Q Consensus 321 ~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~ 400 (548)
++ .|.++|+.+++........ ..+ .....|.| +++.++++...++. |+++|+++++........
T Consensus 248 -d~--~i~~wd~~~~~~~~~~~~~---~~~-----v~~l~~sp---~~~~~lasgs~D~~--i~iwd~~~~~~~~~~~H~ 311 (357)
T 4g56_B 248 -TG--NVSLVNIKNPDSAQTSAVH---SQN-----ITGLAYSY---HSSPFLASISEDCT--VAVLDADFSEVFRDLSHR 311 (357)
T ss_dssp -SS--CEEEEESSCGGGCEEECCC---SSC-----EEEEEECS---SSSCCEEEEETTSC--EEEECTTSCEEEEECCCS
T ss_pred -cc--ceeEEECCCCcEeEEEecc---cee-----EEEEEEcC---CCCCEEEEEeCCCE--EEEEECCCCcEeEECCCC
Confidence 44 4666777666543222110 111 12245554 66666666666664 556688888765443322
Q ss_pred ceeEee--ee-cCCEEEEEEecCCCCCeEEEEEcCC
Q 008927 401 TDIDNI--TL-GNDCLFVEGASGVEPSSVAKVTLDD 433 (548)
Q Consensus 401 ~~~~~~--s~-d~~~l~~~~ss~~~p~~l~~~d~~~ 433 (548)
..+..+ ++ +++. ++.++. -..|.+.++..
T Consensus 312 ~~V~~vafsP~d~~~-l~s~s~---Dg~v~iW~~~~ 343 (357)
T 4g56_B 312 DFVTGVAWSPLDHSK-FTTVGW---DHKVLHHHLPS 343 (357)
T ss_dssp SCEEEEEECSSSTTE-EEEEET---TSCEEEEECC-
T ss_pred CCEEEEEEeCCCCCE-EEEEcC---CCeEEEEECCC
Confidence 335544 55 4454 444443 24577777643
No 81
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.71 E-value=1.2e-05 Score=81.55 Aligned_cols=292 Identities=12% Similarity=0.048 Sum_probs=155.8
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| |..++..... +|...||..... ........ ......+. ...|+++++.++++...++.|
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~---~~~~~~~~-~~h~~~v~---~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSK---GGDIILWDYDVQ---NKTSFIQG-MGPGDAIT---GMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEB---TSCEEEEETTST---TCEEEECC-CSTTCBEE---EEEEETTEEEEEEEEETTTEE
T ss_pred CCEEEEEECCCCCCEEEEEcC---CCeEEEEeCCCc---ccceeeec-CCcCCcee---EEEeCCCCCCEEEEEeCCCEE
Confidence 4567788898 6455555433 577778876433 23222210 00011111 125666344555666677888
Q ss_pred EEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCcee
Q 008927 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYA 247 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~ 247 (548)
.+.++.+ ...+.+..... ....+..+.|+||++.|+....+ ..|.++|+.+.. ...+......+.
T Consensus 144 ~iwd~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~---~~~~~~h~~~v~ 208 (383)
T 3ei3_B 144 TLRDFSG--SVIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDST---------GRLLLLGLDGHE---IFKEKLHKAKVT 208 (383)
T ss_dssp EEEETTS--CEEEEEECCCC-SSCCEEEEEEETTTTEEEEEETT---------SEEEEEETTSCE---EEEEECSSSCEE
T ss_pred EEEECCC--CceEEEeccCC-CCCCeEEEEECCCCCEEEEECCC---------CCEEEEECCCCE---EEEeccCCCcEE
Confidence 8888875 54555543310 11235677899999987765333 478889986544 555554555677
Q ss_pred eeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCce-eeeEEEcCCCCCcccCCcCceECc-CCcEEEEEeCCCCee
Q 008927 248 FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFW 325 (548)
Q Consensus 248 ~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~-~~~~~l~~~~~~~~~~~~~~~wsp-DG~L~~~sd~~~g~~ 325 (548)
...|+|||+.+++.... ...|.+.|+...... .....+ +.. ..+..+.|+| ||++++.... ++
T Consensus 209 ~~~~~~~~~~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~~~-~~~----~~v~~~~~s~~~~~~l~~~~~-d~-- 273 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSV-------DATVKLWDLRNIKDKNSYIAEM-PHE----KPVNAAYFNPTDSTKLLTTDQ-RN-- 273 (383)
T ss_dssp EEEECSSCTTEEEEEET-------TSEEEEEEGGGCCSTTCEEEEE-ECS----SCEEEEEECTTTSCEEEEEES-SS--
T ss_pred EEEECCCCCCEEEEEeC-------CCEEEEEeCCCCCcccceEEEe-cCC----CceEEEEEcCCCCCEEEEEcC-CC--
Confidence 88999999943334321 357888898742110 012223 222 4678899999 9995555444 34
Q ss_pred eEEEEeccCCee-Eeecccc-cccCCCcccccCcceeeeeecCCCCEEEEEEEe------CCeEEEEEEECCCCce-Eee
Q 008927 326 NLHKWIESNNEV-LAIYSLD-AEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ------NGRSYLGILDDFGHSL-SLL 396 (548)
Q Consensus 326 ~Ly~~d~~~g~~-~~l~~~~-~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~------~g~~~L~~~dl~~g~~-~~l 396 (548)
.|.++|+.+++. ..+.... ........+ ...|.| ++..+.+.... .....|+++|+.+++. ..+
T Consensus 274 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p---~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 274 EIRVYSSYDWSKPDQIIIHPHRQFQHLTPI----KATWHP---MYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp EEEEEETTBTTSCSEEEECCBCCCTTSCCC----CCEECS---SSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEE
T ss_pred cEEEEECCCCccccccccccccccccccce----EEeccC---CCCceEEEecCCcccccCCCCeEEEEecCCCceeeee
Confidence 566777766653 2222110 000000000 012222 33333322211 1234577888887764 345
Q ss_pred cCC--CceeE--eeeecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 397 DIP--FTDID--NITLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 397 ~~~--~~~~~--~~s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
... ...+. .+++++..|+. ++ . ..|.++|++
T Consensus 347 ~~~~~~~~~~~~~~s~~g~~l~s-~s--d--~~i~iw~~~ 381 (383)
T 3ei3_B 347 RDPNAAGIISLNKFSPTGDVLAS-GM--G--FNILIWNRE 381 (383)
T ss_dssp CBTTBCSCCCEEEECTTSSEEEE-EE--T--TEEEEEECC
T ss_pred cCCCCCceEEEEEEecCccEEEE-ec--C--CcEEEEecC
Confidence 432 12233 34677775543 33 2 578888765
No 82
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.70 E-value=4.7e-06 Score=82.94 Aligned_cols=226 Identities=10% Similarity=0.059 Sum_probs=130.7
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
|++++. ++.+...++.|.+.++.. ++. +.+... ......+.|+|||+.|+....+ ..|.++|+
T Consensus 88 ~~~~~~-~l~s~s~D~~i~lWd~~~--~~~~~~~~~~----~~~~~~~~~spdg~~l~~g~~d---------g~v~i~~~ 151 (321)
T 3ow8_A 88 ISHTLP-IAASSSLDAHIRLWDLEN--GKQIKSIDAG----PVDAWTLAFSPDSQYLATGTHV---------GKVNIFGV 151 (321)
T ss_dssp ECSSSS-EEEEEETTSEEEEEETTT--TEEEEEEECC----TTCCCCEEECTTSSEEEEECTT---------SEEEEEET
T ss_pred ECCCCC-EEEEEeCCCcEEEEECCC--CCEEEEEeCC----CccEEEEEECCCCCEEEEEcCC---------CcEEEEEc
Confidence 333443 445555678888888875 333 344332 2345567899999987764322 46888899
Q ss_pred CCCCccCcE-EeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 229 NGQNIQEPK-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 229 ~~g~~~~~~-~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
.+++ .. .+...........|||||+.|+.... ...|.+.|+.. ++ ....+.+.. ..+..+.
T Consensus 152 ~~~~---~~~~~~~~~~~v~~~~~spdg~~lasg~~--------dg~i~iwd~~~-~~--~~~~~~~h~----~~v~~l~ 213 (321)
T 3ow8_A 152 ESGK---KEYSLDTRGKFILSIAYSPDGKYLASGAI--------DGIINIFDIAT-GK--LLHTLEGHA----MPIRSLT 213 (321)
T ss_dssp TTCS---EEEEEECSSSCEEEEEECTTSSEEEEEET--------TSCEEEEETTT-TE--EEEEECCCS----SCCCEEE
T ss_pred CCCc---eeEEecCCCceEEEEEECCCCCEEEEEcC--------CCeEEEEECCC-Cc--EEEEEcccC----CceeEEE
Confidence 8886 33 33333445677899999999885542 34688889874 54 234454433 4678899
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
|+|||++++.... ++ .|..+|+.+++....... ...++ ....|.| +++.| ++...++. |.+.|
T Consensus 214 ~spd~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~-----h~~~v---~~~~~sp---~~~~l-~s~s~D~~--v~iwd 276 (321)
T 3ow8_A 214 FSPDSQLLVTASD-DG--YIKIYDVQHANLAGTLSG-----HASWV---LNVAFCP---DDTHF-VSSSSDKS--VKVWD 276 (321)
T ss_dssp ECTTSCEEEEECT-TS--CEEEEETTTCCEEEEECC-----CSSCE---EEEEECT---TSSEE-EEEETTSC--EEEEE
T ss_pred EcCCCCEEEEEcC-CC--eEEEEECCCcceeEEEcC-----CCCce---EEEEECC---CCCEE-EEEeCCCc--EEEEe
Confidence 9999996555544 44 366667766654332211 11111 1245654 55554 45555554 55668
Q ss_pred CCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEE
Q 008927 388 DFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVT 430 (548)
Q Consensus 388 l~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d 430 (548)
+.+++.. .+......+..+ +++++.|+. ++. -..|.++|
T Consensus 277 ~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s-~~~---d~~i~vwd 318 (321)
T 3ow8_A 277 VGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS-VGD---DQEIHIYD 318 (321)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EET---TCCEEEEE
T ss_pred CCCCEEEEEEcCCCCcEEEEEECCCCCEEEE-EeC---CCeEEEEe
Confidence 7777543 333333334444 566665543 332 13455555
No 83
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.70 E-value=3.2e-06 Score=84.50 Aligned_cols=222 Identities=11% Similarity=0.037 Sum_probs=123.6
Q ss_pred CHHHHhcCC-CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEE
Q 008927 80 TADVVSGAS-KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTV 157 (548)
Q Consensus 80 t~~~l~~~~-~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i 157 (548)
+++.+.... .....|.|+| ++.+||+... .+ .|++++..+ +..+.+... ..+ .+..|.++|. +
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~---~~--~i~~~d~~~-~~~~~~~~~-----~~v---~~i~~~~dg~-l 103 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNIL---ER--ELHELHLAS-GRKTVHALP-----FMG---SALAKISDSK-Q 103 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGG---GT--EEEEEETTT-TEEEEEECS-----SCE---EEEEEEETTE-E
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECC---CC--EEEEEECCC-CcEEEEECC-----Ccc---eEEEEeCCCe-E
Confidence 455555532 2346799999 8999999743 23 466665542 233333211 111 1224555554 4
Q ss_pred EEEeCCCCeEEEEeCCCCCCCceecCCCCC-CCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCc
Q 008927 158 IFSNYKDQRLYKHSIDSKDSSPLPITPDYG-EPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEP 236 (548)
Q Consensus 158 ~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~-~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~ 236 (548)
++.. ...|+++++++ ++.+.+..... ....+..++.++|||+. ++...... .......||+++ +++ .
T Consensus 104 ~v~~--~~gl~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~v~~~~~~--~~~~~~~l~~~~--~g~---~ 171 (326)
T 2ghs_A 104 LIAS--DDGLFLRDTAT--GVLTLHAELESDLPGNRSNDGRMHPSGAL-WIGTMGRK--AETGAGSIYHVA--KGK---V 171 (326)
T ss_dssp EEEE--TTEEEEEETTT--CCEEEEECSSTTCTTEEEEEEEECTTSCE-EEEEEETT--CCTTCEEEEEEE--TTE---E
T ss_pred EEEE--CCCEEEEECCC--CcEEEEeeCCCCCCCCCCCCEEECCCCCE-EEEeCCCc--CCCCceEEEEEe--CCc---E
Confidence 4444 34599999976 66666643211 01235667889999984 33322211 011246899999 465 5
Q ss_pred EEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEec-CCC-ceeeeEEEcCCC-CCcccCCcCceECcCCc
Q 008927 237 KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYIS-ENG-DVYKRVCVAGFD-PTIVESPTEPKWSSKGE 313 (548)
Q Consensus 237 ~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~-~~g-~~~~~~~l~~~~-~~~~~~~~~~~wspDG~ 313 (548)
+.+..+........|||||+.|++... ....|++++++ .+| ++...+.+.... .. .......+++||.
T Consensus 172 ~~~~~~~~~~~~i~~s~dg~~lyv~~~-------~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~--~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 172 TKLFADISIPNSICFSPDGTTGYFVDT-------KVNRLMRVPLDARTGLPTGKAEVFIDSTGIK--GGMDGSVCDAEGH 242 (326)
T ss_dssp EEEEEEESSEEEEEECTTSCEEEEEET-------TTCEEEEEEBCTTTCCBSSCCEEEEECTTSS--SEEEEEEECTTSC
T ss_pred EEeeCCCcccCCeEEcCCCCEEEEEEC-------CCCEEEEEEcccccCCcccCceEEEECCCCC--CCCCeeEECCCCC
Confidence 555544334456789999998876542 13579999986 235 432222222110 01 2234567888998
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEee
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAI 340 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l 340 (548)
||+.... . ..|+++++++...+.+
T Consensus 243 lwva~~~-~--~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 243 IWNARWG-E--GAVDRYDTDGNHIARY 266 (326)
T ss_dssp EEEEEET-T--TEEEEECTTCCEEEEE
T ss_pred EEEEEeC-C--CEEEEECCCCCEEEEE
Confidence 7665533 2 2688999844333333
No 84
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.70 E-value=9.8e-06 Score=80.50 Aligned_cols=259 Identities=13% Similarity=0.072 Sum_probs=137.2
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCC-CCCCccccceeeCCeeeEEECCEEEEEeCCC---
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITP-KEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD--- 164 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~-~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~--- 164 (548)
..+..+.++|.+++||+... .+ .|++++..+ ++.+.++. .... ++ +..+.++| .|++....+
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~---~~--~i~~~d~~~-~~~~~~~~~~~~~----~~---~i~~~~dg-~l~v~~~~~~~~ 110 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVF---EG--NIFKINPET-KEIKRPFVSHKAN----PA---AIKIHKDG-RLFVCYLGDFKS 110 (333)
T ss_dssp CCEEEEEECTTSCEEEEETT---TC--EEEEECTTT-CCEEEEEECSSSS----EE---EEEECTTS-CEEEEECTTSSS
T ss_pred ccccCcEECCCCCEEEEECC---CC--EEEEEeCCC-CcEEEEeeCCCCC----cc---eEEECCCC-cEEEEeCCCCCC
Confidence 45678899984457776532 23 466665542 34444431 1111 11 11233344 455555444
Q ss_pred -CeEEEEeCCCCCCCcee-cCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeec
Q 008927 165 -QRLYKHSIDSKDSSPLP-ITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSG 242 (548)
Q Consensus 165 -~~Ly~~~~~~~~~~~~~-lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~ 242 (548)
..|+++++++ +..+. ++... ......++.++|||+.+ +...... .......||++|.++++ .+.+...
T Consensus 111 ~~~i~~~d~~~--~~~~~~~~~~~--~~~~~~~i~~d~~g~l~-v~~~~~~--~~~~~~~l~~~~~~~~~---~~~~~~~ 180 (333)
T 2dg1_A 111 TGGIFAATENG--DNLQDIIEDLS--TAYCIDDMVFDSKGGFY-FTDFRGY--STNPLGGVYYVSPDFRT---VTPIIQN 180 (333)
T ss_dssp CCEEEEECTTS--CSCEEEECSSS--SCCCEEEEEECTTSCEE-EEECCCB--TTBCCEEEEEECTTSCC---EEEEEEE
T ss_pred CceEEEEeCCC--CEEEEEEccCc--cCCcccceEECCCCCEE-EEecccc--ccCCCceEEEEeCCCCE---EEEeecC
Confidence 5899999987 55553 33211 12345577899999743 3322110 01124689999998877 6666544
Q ss_pred CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCc-eeee--EEEcCCCCCcccCCcCceECcCCcEEEEEe
Q 008927 243 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKR--VCVAGFDPTIVESPTEPKWSSKGELFFVTD 319 (548)
Q Consensus 243 ~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~-~~~~--~~l~~~~~~~~~~~~~~~wspDG~L~~~sd 319 (548)
........|+|||+.|++.... ...|++++++.+|. +... ......... .....+.+++||+||+...
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~-------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v~~~ 251 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETT-------ANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDSDDNLYVAMY 251 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGG-------GTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBTTCCEEEEEE
T ss_pred CCcccceEECCCCCEEEEEeCC-------CCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECCCCCEEEEEc
Confidence 3345567899999988655421 35799999864343 2110 111111100 1234578899998766553
Q ss_pred CCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC---CeEEEEEEECC
Q 008927 320 RKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN---GRSYLGILDDF 389 (548)
Q Consensus 320 ~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~---g~~~L~~~dl~ 389 (548)
. . ..|+++++++...+.+.......+...+ .....+.+ |++.|+++...+ ....|+++++.
T Consensus 252 ~-~--~~v~~~d~~g~~~~~~~~~~~~~g~~~~---~~~~~~~~---dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 252 G-Q--GRVLVFNKRGYPIGQILIPGRDEGHMLR---STHPQFIP---GTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp T-T--TEEEEECTTSCEEEEEECTTGGGTCSCB---CCEEEECT---TSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred C-C--CEEEEECCCCCEEEEEEcCCCccccccC---cceEEECC---CCCEEEEEeCccCCCCCceEEEEecc
Confidence 3 2 2688888854444444211100000001 11234443 667787766542 34578888764
No 85
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.69 E-value=1.7e-06 Score=85.39 Aligned_cols=257 Identities=11% Similarity=0.010 Sum_probs=137.7
Q ss_pred HHHHhcCCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEE
Q 008927 81 ADVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIF 159 (548)
Q Consensus 81 ~~~l~~~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F 159 (548)
++.|.........|.|+| |+.++|+... .++ |++++.+ ++.+.+....-. . -+..+.++| .|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~---~~~--i~~~~~~--g~~~~~~~~~~~----~---~gl~~d~dG-~l~v 101 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLV---GRR--VLGWRED--GTVDVLLDATAF----T---NGNAVDAQQ-RLVH 101 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETT---TTE--EEEEETT--SCEEEEEESCSC----E---EEEEECTTS-CEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECC---CCE--EEEEeCC--CCEEEEeCCCCc----c---ceeeECCCC-CEEE
Confidence 344444435556889999 8889998643 344 4444444 344433321100 0 011333344 4555
Q ss_pred EeCCCCeEEEEeCCCCCCCceecCCCCCCC-CceecceeeCCCCCEEEEEEe------cc---CCCCCCceeEEEEEECC
Q 008927 160 SNYKDQRLYKHSIDSKDSSPLPITPDYGEP-LVSYADGIFDPRFNRYVTVRE------DR---RQDALNSTTEIVAIALN 229 (548)
Q Consensus 160 ~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~-~~~~~~~~~SpDG~~i~~v~~------~~---~~~~~~~~~~l~~idl~ 229 (548)
.......|++++.++ +.+.+....... .....++.++|||+ |++... +. ..........||++|.+
T Consensus 102 ~~~~~~~v~~~~~~g---~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 102 CEHGRRAITRSDADG---QAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EETTTTEEEEECTTS---CEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EECCCCEEEEECCCC---CEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 555556899999863 455553321000 01245688999997 444210 00 00001123689999998
Q ss_pred CCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceEC
Q 008927 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (548)
Q Consensus 230 ~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ws 309 (548)
+++ .+.+. +........|||||+.|++...... +-....|++++++.++ +...+.+.... . .....+.++
T Consensus 178 ~g~---~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~--~~~~~~i~~~~~~~~~-l~~~~~~~~~~-~--~~pdgi~~d 247 (305)
T 3dr2_A 178 GSP---LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQ--GHGSVEITAFAWRDGA-LHDRRHFASVP-D--GLPDGFCVD 247 (305)
T ss_dssp SCC---CEEEE-EESSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTE-EEEEEEEECCS-S--SCCCSEEEC
T ss_pred CCc---EEEEe-cCCCCcceEEcCCCCEEEEEecCCc--CCCCCEEEEEEecCCC-ccCCeEEEECC-C--CCCCeEEEC
Confidence 888 66665 3333456789999998875542210 0013579999998543 33333332211 1 234567889
Q ss_pred cCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEEC
Q 008927 310 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 310 pDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl 388 (548)
+||+||+.+ . . .|+++++++.....+... . +.....+.+ +++.|+++.. ..||++++
T Consensus 248 ~~G~lwv~~-~-~---gv~~~~~~g~~~~~~~~~-------~---~~~~~~f~~---d~~~L~it~~----~~l~~~~~ 304 (305)
T 3dr2_A 248 RGGWLWSSS-G-T---GVCVFDSDGQLLGHIPTP-------G---TASNCTFDQ---AQQRLFITGG----PCLWMLPL 304 (305)
T ss_dssp TTSCEEECC-S-S---EEEEECTTSCEEEEEECS-------S---CCCEEEECT---TSCEEEEEET----TEEEEEEC
T ss_pred CCCCEEEec-C-C---cEEEECCCCCEEEEEECC-------C---ceeEEEEeC---CCCEEEEEcC----CeEEEEEC
Confidence 999865544 3 2 499999865444444311 1 112234433 6667766542 25777664
No 86
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.69 E-value=1.4e-05 Score=78.59 Aligned_cols=235 Identities=12% Similarity=0.141 Sum_probs=135.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|++++..|+... .++.|.+.++.. ++.. .+... ...+..+.|+|||+.|+....+ ..|.++|
T Consensus 30 ~~s~~~~~l~s~~-~dg~i~iw~~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------~~i~vwd 93 (312)
T 4ery_A 30 KFSPNGEWLASSS-ADKLIKIWGAYD--GKFEKTISGH----KLGISDVAWSSDSNLLVSASDD---------KTLKIWD 93 (312)
T ss_dssp EECTTSSEEEEEE-TTSCEEEEETTT--CCEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEE
T ss_pred EECCCCCEEEEee-CCCeEEEEeCCC--cccchhhccC----CCceEEEEEcCCCCEEEEECCC---------CEEEEEE
Confidence 4556666655543 566677777765 4443 34332 2346678899999988775433 3688889
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+.+++. ...+...........|+|||+.|+-... ...|.+.|+.. ++ ....+.... ..+....
T Consensus 94 ~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~--------d~~i~iwd~~~-~~--~~~~~~~~~----~~v~~~~ 156 (312)
T 4ery_A 94 VSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSF--------DESVRIWDVKT-GK--CLKTLPAHS----DPVSAVH 156 (312)
T ss_dssp TTTCCE--EEEEECCSSCEEEEEECSSSSEEEEEET--------TSCEEEEETTT-CC--EEEEECCCS----SCEEEEE
T ss_pred CCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeC--------CCcEEEEECCC-CE--EEEEecCCC----CcEEEEE
Confidence 998861 2334434445667789999998875442 34688889874 43 233444432 4567789
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
|+|||++++.... +| .|..+|+.+++.. .+.... ..+ .....+.| +++.|+ +...++ .|.++
T Consensus 157 ~~~~~~~l~~~~~-d~--~i~~wd~~~~~~~~~~~~~~---~~~-----~~~~~~~~---~~~~l~-~~~~d~--~i~iw 219 (312)
T 4ery_A 157 FNRDGSLIVSSSY-DG--LCRIWDTASGQCLKTLIDDD---NPP-----VSFVKFSP---NGKYIL-AATLDN--TLKLW 219 (312)
T ss_dssp ECTTSSEEEEEET-TS--CEEEEETTTCCEEEEECCSS---CCC-----EEEEEECT---TSSEEE-EEETTT--EEEEE
T ss_pred EcCCCCEEEEEeC-CC--cEEEEECCCCceeeEEeccC---CCc-----eEEEEECC---CCCEEE-EEcCCC--eEEEE
Confidence 9999995555544 44 4666777666543 222110 111 11234543 556554 444455 46677
Q ss_pred ECCCCceE-eecCCCc----eeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 387 DDFGHSLS-LLDIPFT----DIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 387 dl~~g~~~-~l~~~~~----~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
|+.+++.. .+..... ....+...++.+++.++. ...|+++|+.+++.
T Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~---dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 220 DYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE---DNLVYIWNLQTKEI 271 (312)
T ss_dssp ETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT---TSCEEEEETTTCCE
T ss_pred ECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC---CCEEEEEECCCchh
Confidence 88877643 3332111 112223344444444432 35788899877653
No 87
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.68 E-value=4.7e-06 Score=82.88 Aligned_cols=248 Identities=12% Similarity=0.023 Sum_probs=132.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
.|.++| .|+++...++.|+++++++ ++.+.+.... ......+.++|||+.++.. .... .....|+++|+
T Consensus 51 ~~~~~g-~l~~~~~~~~~i~~~d~~~--~~~~~~~~~~---~~~~~~i~~~~dg~l~v~~-~~~~----~~~~~i~~~d~ 119 (333)
T 2dg1_A 51 NFDRQG-QLFLLDVFEGNIFKINPET--KEIKRPFVSH---KANPAAIKIHKDGRLFVCY-LGDF----KSTGGIFAATE 119 (333)
T ss_dssp EECTTS-CEEEEETTTCEEEEECTTT--CCEEEEEECS---SSSEEEEEECTTSCEEEEE-CTTS----SSCCEEEEECT
T ss_pred EECCCC-CEEEEECCCCEEEEEeCCC--CcEEEEeeCC---CCCcceEEECCCCcEEEEe-CCCC----CCCceEEEEeC
Confidence 454444 4787776778999999987 6666654211 1245667899999854443 2110 01247999999
Q ss_pred CCCCccCcEEeee-c--CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 229 NGQNIQEPKVLVS-G--SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 229 ~~g~~~~~~~L~~-~--~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
+++. .+.+.. . ........++|||+ |.+....... .-....||.++.++ +++ ..+.... .....
T Consensus 120 ~~~~---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~-~~~~~~l~~~~~~~-~~~---~~~~~~~----~~~~~ 186 (333)
T 2dg1_A 120 NGDN---LQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYS-TNPLGGVYYVSPDF-RTV---TPIIQNI----SVANG 186 (333)
T ss_dssp TSCS---CEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBT-TBCCEEEEEECTTS-CCE---EEEEEEE----SSEEE
T ss_pred CCCE---EEEEEccCccCCcccceEECCCCC-EEEEeccccc-cCCCceEEEEeCCC-CEE---EEeecCC----Ccccc
Confidence 9987 553322 1 22345678999997 4333321100 00135788887652 432 2222111 23456
Q ss_pred ceECcCCc-EEEEEeCCCCeeeEEEEeccC-C-eeEeeccc-ccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeE
Q 008927 306 PKWSSKGE-LFFVTDRKNGFWNLHKWIESN-N-EVLAIYSL-DAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (548)
Q Consensus 306 ~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~-g-~~~~l~~~-~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~ 381 (548)
+.|+|||+ ||+.... .+ .|+++++++ + ....+... ......... ...+.+.+ ++ .|++....+ .
T Consensus 187 i~~~~dg~~l~v~~~~-~~--~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~---~~~i~~d~---~G-~l~v~~~~~--~ 254 (333)
T 2dg1_A 187 IALSTDEKVLWVTETT-AN--RLHRIALEDDGVTIQPFGATIPYYFTGHEG---PDSCCIDS---DD-NLYVAMYGQ--G 254 (333)
T ss_dssp EEECTTSSEEEEEEGG-GT--EEEEEEECTTSSSEEEEEEEEEEECCSSSE---EEEEEEBT---TC-CEEEEEETT--T
T ss_pred eEECCCCCEEEEEeCC-CC--eEEEEEecCCCcCcccccceEEEecCCCCC---CCceEECC---CC-CEEEEEcCC--C
Confidence 78999999 6555433 33 678888742 3 23222100 000000000 11133432 44 455444322 3
Q ss_pred EEEEEECCCCceEeecCCCc------eeEee--eecCCEEEEEEecC--CCCCeEEEEEcC
Q 008927 382 YLGILDDFGHSLSLLDIPFT------DIDNI--TLGNDCLFVEGASG--VEPSSVAKVTLD 432 (548)
Q Consensus 382 ~L~~~dl~~g~~~~l~~~~~------~~~~~--s~d~~~l~~~~ss~--~~p~~l~~~d~~ 432 (548)
.|+++|+++...+.+..+.. ....+ ++|++.||+..... .....||++++.
T Consensus 255 ~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 255 RVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 67888986554555554321 22222 56777887766542 234678888864
No 88
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.67 E-value=3.5e-06 Score=86.41 Aligned_cols=242 Identities=11% Similarity=0.092 Sum_probs=140.3
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.+|++++..|+... .++.|++.++.. ++....... ........|+|||+.|+....+ ..|.++|
T Consensus 62 ~~~s~~g~~l~~~~-~d~~v~i~d~~~--~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~d---------g~i~iwd 125 (420)
T 3vl1_A 62 NTFEKVGSHLYKAR-LDGHDFLFNTII--RDGSKMLKR----ADYTAVDTAKLQMRRFILGTTE---------GDIKVLD 125 (420)
T ss_dssp CEEEEEETTEEEEE-ETTEEEEEECCS--EETTTTSCS----CCEEEEEEECSSSCEEEEEETT---------SCEEEEC
T ss_pred eeeeecCCeEEEEE-cCCcEEEEEecc--cceeeEEec----CCceEEEEEecCCCEEEEEECC---------CCEEEEe
Confidence 47899988776654 367888888875 333222222 1122233689999988775433 3588889
Q ss_pred CCCCCccCcEEee-ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCc
Q 008927 228 LNGQNIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 228 l~~g~~~~~~~L~-~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 306 (548)
+.+++ ...+. ...+.+....|+|||+.|+.... ...|.+.++.. ++ ....+.+.. ..+..+
T Consensus 126 ~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--------d~~i~iwd~~~-~~--~~~~~~~h~----~~v~~~ 187 (420)
T 3vl1_A 126 SNFNL---QREIDQAHVSEITKLKFFPSGEALISSSQ--------DMQLKIWSVKD-GS--NPRTLIGHR----ATVTDI 187 (420)
T ss_dssp TTSCE---EEEETTSSSSCEEEEEECTTSSEEEEEET--------TSEEEEEETTT-CC--CCEEEECCS----SCEEEE
T ss_pred CCCcc---eeeecccccCccEEEEECCCCCEEEEEeC--------CCeEEEEeCCC-Cc--CceEEcCCC----CcEEEE
Confidence 98876 44443 34455778899999998875441 35799999984 43 234444433 567889
Q ss_pred eECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCC----ccc------------ccCcceeeeeecCCCCE
Q 008927 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRP----LWV------------FGINSYEIIQSHGEKNL 370 (548)
Q Consensus 307 ~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p----~w~------------~~~~~~~~~~~~~d~~~ 370 (548)
.|+|||++++.... +| .|..+|+.+++.............. .|. .......|.| +++
T Consensus 188 ~~~~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~~~- 260 (420)
T 3vl1_A 188 AIIDRGRNVLSASL-DG--TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT---YGK- 260 (420)
T ss_dssp EEETTTTEEEEEET-TS--CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC---TTE-
T ss_pred EEcCCCCEEEEEcC-CC--cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC---CCC-
Confidence 99999995555444 44 4666777777654332210000000 000 0111233443 444
Q ss_pred EEEEEEeCCeEEEEEEECCCCceE-eecCC-CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 371 IACSYRQNGRSYLGILDDFGHSLS-LLDIP-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 371 l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~-~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
++++...++. |.++|+.+++.. .+... ...+..+ +++++.++++++. ...|+++|+.+++
T Consensus 261 ~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~---dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 261 YVIAGHVSGV--ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE---NGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEEETTSC--EEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTT
T ss_pred EEEEEcCCCe--EEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC---CCeEEEEEcCCCc
Confidence 4445555554 667788777543 33332 2334444 5677635555543 3678999987764
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.67 E-value=1.8e-06 Score=89.69 Aligned_cols=296 Identities=11% Similarity=0.049 Sum_probs=149.4
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
++..+.++| +..+...-. .+|.-.||.+... .....+...+ -...|. .-.|+|.++.++++...|+.|.
T Consensus 121 ~V~~l~~~P~~~~~lasGs---~dg~i~lWd~~~~--~~~~~~~~~g--H~~~V~---~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGS---KGGDIMLWNFGIK--DKPTFIKGIG--AGGSIT---GLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp CEEEEEECSSCTTCEEEEE---TTSCEEEECSSCC--SCCEEECCCS--SSCCCC---EEEECSSCTTEEEEECSSSCEE
T ss_pred CEEEEEEeCCCCCEEEEEe---CCCEEEEEECCCC--CceeEEEccC--CCCCEE---EEEEeCCCCCEEEEEeCCCEEE
Confidence 355677777 555444332 2577777755332 1222222111 011111 1256665555666766778777
Q ss_pred EEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceee
Q 008927 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAF 248 (548)
Q Consensus 169 ~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~ 248 (548)
+.|+.+ +..+.+..... ....+..+.|+|||+.|+....+ ..|.++|+.+.. ...+....+.+..
T Consensus 191 iwd~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~d---------g~i~~wd~~~~~---~~~~~~h~~~v~~ 255 (435)
T 4e54_B 191 LQDFKG--NILRVFASSDT-INIWFCSLDVSASSRMVVTGDNV---------GNVILLNMDGKE---LWNLRMHKKKVTH 255 (435)
T ss_dssp EEETTS--CEEEEEECCSS-CSCCCCCEEEETTTTEEEEECSS---------SBEEEEESSSCB---CCCSBCCSSCEEE
T ss_pred EeeccC--CceeEEeccCC-CCccEEEEEECCCCCEEEEEeCC---------CcEeeeccCcce---eEEEecccceEEe
Confidence 778876 44444433210 12334567899999987664322 358888998766 5555544455677
Q ss_pred eEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEE
Q 008927 249 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 328 (548)
Q Consensus 249 p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly 328 (548)
..|+|+++.++..... ...|.+.|+.............+.. ..+....|+|||++++.... +| .|.
T Consensus 256 v~~~p~~~~~~~s~s~-------d~~v~iwd~~~~~~~~~~~~~~~h~----~~v~~~~~spdg~~l~s~~~-D~--~i~ 321 (435)
T 4e54_B 256 VALNPCCDWFLATASV-------DQTVKIWDLRQVRGKASFLYSLPHR----HPVNAACFSPDGARLLTTDQ-KS--EIR 321 (435)
T ss_dssp EEECTTCSSEEEEEET-------TSBCCEEETTTCCSSSCCSBCCBCS----SCEEECCBCTTSSEEEEEES-SS--CEE
T ss_pred eeecCCCceEEEEecC-------cceeeEEecccccccceEEEeeecc----ccccceeECCCCCeeEEEcC-CC--EEE
Confidence 8999999876655422 2356677876422111111111211 35677889999995555444 44 456
Q ss_pred EEeccCCee-EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC---------eEEEEEEECCCCceE-eec
Q 008927 329 KWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---------RSYLGILDDFGHSLS-LLD 397 (548)
Q Consensus 329 ~~d~~~g~~-~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g---------~~~L~~~dl~~g~~~-~l~ 397 (548)
++++.+++. ..+....... ..+... ....+.+ ++..++.....++ ...|.++|..+|+.. .+.
T Consensus 322 iwd~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 322 VYSASQWDCPLGLIPHPHRH--FQHLTP-IKAAWHP---RYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp EEESSSSSSEEEECCCCCCC--CSSSCC-CBCEECS---SSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred EEECCCCccceEEecccccc--ccccee-EEEEEcC---CCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 667666653 2222111000 001000 0112222 3333433322211 124777888888754 333
Q ss_pred CCC-cee---EeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 398 IPF-TDI---DNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 398 ~~~-~~~---~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.+. ..+ ..+++++..|+ .++ -..|.++++++++
T Consensus 396 ~~~~~~v~s~~~fspdg~~la-sg~----d~~i~iW~~~~gk 432 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLA-SAM----GYHILIWSQQEAR 432 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEE-EEC----SSEEEECCCC---
T ss_pred CCCCCcEEEEEEECCCCCEEE-EEc----CCcEEEEECCcCe
Confidence 322 122 23467776543 332 1368888887765
No 90
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.66 E-value=1e-05 Score=86.91 Aligned_cols=246 Identities=8% Similarity=0.058 Sum_probs=139.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeC--CCCCCCc-eecCCCCCCCCceecceeeCC----CCCEEEEEEeccCCCCCCcee
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSI--DSKDSSP-LPITPDYGEPLVSYADGIFDP----RFNRYVTVREDRRQDALNSTT 221 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~--~~~~~~~-~~lT~~~~~~~~~~~~~~~Sp----DG~~i~~v~~~~~~~~~~~~~ 221 (548)
.|++||+.|+-.+ .++.|.++|+ .. ++. ..|..+ .....+.+|| ||++|+...+.. .
T Consensus 185 ~~spdg~~l~v~~-~d~~V~v~D~~~~t--~~~~~~i~~g-----~~p~~va~sp~~~~dg~~l~v~~~~~--------~ 248 (543)
T 1nir_A 185 RMSASGRYLLVIG-RDARIDMIDLWAKE--PTKVAEIKIG-----IEARSVESSKFKGYEDRYTIAGAYWP--------P 248 (543)
T ss_dssp EECTTSCEEEEEE-TTSEEEEEETTSSS--CEEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEES--------S
T ss_pred EECCCCCEEEEEC-CCCeEEEEECcCCC--CcEEEEEecC-----CCcceEEeCCCcCCCCCEEEEEEccC--------C
Confidence 5777777776665 4589999999 44 332 333322 2334567999 999876654321 4
Q ss_pred EEEEEECCCCCccCcEEeee-c---------CC-ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeE
Q 008927 222 EIVAIALNGQNIQEPKVLVS-G---------SD-FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRV 290 (548)
Q Consensus 222 ~l~~idl~~g~~~~~~~L~~-~---------~~-~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~ 290 (548)
.|.++|..+++. .+.+.. + .+ ......+|||++.+++.. . ....|+++|......+. ..
T Consensus 249 ~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~-~------~~g~i~vvd~~~~~~l~-~~ 318 (543)
T 1nir_A 249 QFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV-K------ETGKVLLVNYKDIDNLT-VT 318 (543)
T ss_dssp EEEEEETTTCCE--EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE-T------TTTEEEEEECTTSSSCE-EE
T ss_pred eEEEEecccccc--ceeecccCcccCccccccCCceEEEEECCCCCEEEEEE-C------CCCeEEEEEecCCCcce-eE
Confidence 688899998872 223321 1 11 345568999999775433 2 24689999997432221 12
Q ss_pred EEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCE
Q 008927 291 CVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNL 370 (548)
Q Consensus 291 ~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~ 370 (548)
.+... .......|+|||+.++++...++ .|.++|+++++.....+.. ....+.+ +. .+ ..| +++.
T Consensus 319 ~i~~~-----~~~~~~~~spdg~~l~va~~~~~--~v~v~D~~tg~l~~~i~~g-~~ph~g~--g~-~~-~~p---~~g~ 383 (543)
T 1nir_A 319 SIGAA-----PFLHDGGWDSSHRYFMTAANNSN--KVAVIDSKDRRLSALVDVG-KTPHPGR--GA-NF-VHP---KYGP 383 (543)
T ss_dssp EEECC-----SSCCCEEECTTSCEEEEEEGGGT--EEEEEETTTTEEEEEEECS-SSBCCTT--CE-EE-EET---TTEE
T ss_pred EeccC-----cCccCceECCCCCEEEEEecCCC--eEEEEECCCCeEEEeeccC-CCCCCCC--Cc-cc-CCC---CCcc
Confidence 33321 34667899999995555543233 5777999898865543211 0011111 11 11 122 5566
Q ss_pred EEEEEEeCCeEEEEEEECCC-------Cc-eEeecCCCce--eEeeeecCCEEEEEEe-cCC--CCCeEEEEEcCCCce
Q 008927 371 IACSYRQNGRSYLGILDDFG-------HS-LSLLDIPFTD--IDNITLGNDCLFVEGA-SGV--EPSSVAKVTLDDHKL 436 (548)
Q Consensus 371 l~~~~~~~g~~~L~~~dl~~-------g~-~~~l~~~~~~--~~~~s~d~~~l~~~~s-s~~--~p~~l~~~d~~~~~~ 436 (548)
++++.. .+...|.++|.++ .+ ++.|..+... .-.++++++.||+... +++ ....|.++|.++++.
T Consensus 384 ~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 384 VWSTSH-LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEEecc-CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 655432 2334577777766 33 3445433222 2223788888775431 111 134899999987763
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.65 E-value=3.1e-05 Score=79.31 Aligned_cols=238 Identities=6% Similarity=-0.015 Sum_probs=136.8
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
+.++++.++... .++.|++.++.+ ++...+.... ....+..+.|+|||+.|+....+ ..|.++|+.
T Consensus 99 ~~~s~~~l~~~~-~d~~v~lw~~~~--~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~d---------g~i~iwd~~ 164 (401)
T 4aez_A 99 LDWSNLNVVAVA-LERNVYVWNADS--GSVSALAETD--ESTYVASVKWSHDGSFLSVGLGN---------GLVDIYDVE 164 (401)
T ss_dssp EEECTTSEEEEE-ETTEEEEEETTT--CCEEEEEECC--TTCCEEEEEECTTSSEEEEEETT---------SCEEEEETT
T ss_pred EeecCCCEEEEE-CCCeEEEeeCCC--CcEeEeeecC--CCCCEEEEEECCCCCEEEEECCC---------CeEEEEECc
Confidence 445555444332 467899999887 5554443321 12346678899999988775433 358888998
Q ss_pred CCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceEC
Q 008927 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (548)
Q Consensus 230 ~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ws 309 (548)
+++. .+.+......+....| +++.|+... ....|.+.++...+. ....+.+.. ..+....|+
T Consensus 165 ~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~--------~dg~i~i~d~~~~~~--~~~~~~~~~----~~v~~~~~~ 226 (401)
T 4aez_A 165 SQTK--LRTMAGHQARVGCLSW--NRHVLSSGS--------RSGAIHHHDVRIANH--QIGTLQGHS----SEVCGLAWR 226 (401)
T ss_dssp TCCE--EEEECCCSSCEEEEEE--ETTEEEEEE--------TTSEEEEEETTSSSC--EEEEEECCS----SCEEEEEEC
T ss_pred CCeE--EEEecCCCCceEEEEE--CCCEEEEEc--------CCCCEEEEecccCcc--eeeEEcCCC----CCeeEEEEc
Confidence 8761 3334333344555566 567666443 135789999874332 233344433 467788999
Q ss_pred cCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC
Q 008927 310 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 389 (548)
Q Consensus 310 pDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~ 389 (548)
|||++++.... +| .|..+|+.+++....... .. . ......|.| ++..++++........|.++|+.
T Consensus 227 ~~~~~l~s~~~-d~--~v~iwd~~~~~~~~~~~~---~~--~---~v~~~~~~p---~~~~ll~~~~gs~d~~i~i~d~~ 292 (401)
T 4aez_A 227 SDGLQLASGGN-DN--VVQIWDARSSIPKFTKTN---HN--A---AVKAVAWCP---WQSNLLATGGGTMDKQIHFWNAA 292 (401)
T ss_dssp TTSSEEEEEET-TS--CEEEEETTCSSEEEEECC---CS--S---CCCEEEECT---TSTTEEEEECCTTTCEEEEEETT
T ss_pred CCCCEEEEEeC-CC--eEEEccCCCCCccEEecC---Cc--c---eEEEEEECC---CCCCEEEEecCCCCCEEEEEECC
Confidence 99995555544 34 467778777654332211 01 1 112245554 56667665431123457788988
Q ss_pred CCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 390 GHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 390 ~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+++.. .+.. ...+..+ +++++.++..... ....|.++|+.+++.
T Consensus 293 ~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~g~--~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 293 TGARVNTVDA-GSQVTSLIWSPHSKEIMSTHGF--PDNNLSIWSYSSSGL 339 (401)
T ss_dssp TCCEEEEEEC-SSCEEEEEECSSSSEEEEEECT--TTCEEEEEEEETTEE
T ss_pred CCCEEEEEeC-CCcEEEEEECCCCCeEEEEeec--CCCcEEEEecCCccc
Confidence 87654 3332 2334444 6777776655432 235788888776653
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.65 E-value=2.7e-06 Score=95.45 Aligned_cols=238 Identities=11% Similarity=0.031 Sum_probs=139.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+|++..|+... .++.|.+.++..+ ...+.++.. ...+..+.|+|||+.|+....+ ..|.++|+
T Consensus 20 ~~sp~~~~la~~~-~~g~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~vw~~ 84 (814)
T 3mkq_A 20 DFHPTEPWVLTTL-YSGRVEIWNYETQ-VEVRSIQVT----ETPVRAGKFIARKNWIIVGSDD---------FRIRVFNY 84 (814)
T ss_dssp EECSSSSEEEEEE-TTSEEEEEETTTT-EEEEEEECC----SSCEEEEEEEGGGTEEEEEETT---------SEEEEEET
T ss_pred EECCCCCEEEEEe-CCCEEEEEECCCC-ceEEEEecC----CCcEEEEEEeCCCCEEEEEeCC---------CeEEEEEC
Confidence 6778888887765 4677888888651 233445433 2346678899999998876433 46889999
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+++. ...+....+.+....|||||++|+... ....|.+.+++.+.. ....+.+.. ..+....|
T Consensus 85 ~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~--------~dg~i~vw~~~~~~~--~~~~~~~~~----~~v~~~~~ 148 (814)
T 3mkq_A 85 NTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGS--------DDLTVKLWNWENNWA--LEQTFEGHE----HFVMCVAF 148 (814)
T ss_dssp TTCCE--EEEEECCSSCEEEEEECSSSSEEEEEE--------TTSEEEEEEGGGTSE--EEEEEECCS----SCEEEEEE
T ss_pred CCCcE--EEEEecCCCCEEEEEEeCCCCEEEEEc--------CCCEEEEEECCCCce--EEEEEcCCC----CcEEEEEE
Confidence 98872 334444455677889999999988544 135788889875322 233444433 45778899
Q ss_pred Cc-CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 309 SS-KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 309 sp-DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+| ||++++.... +| .|..+++.+++........ ...+ .....+.| .+++. ++++...++ .|.++|
T Consensus 149 ~p~~~~~l~~~~~-dg--~v~vwd~~~~~~~~~~~~~--~~~~-----v~~~~~~~-~~~~~-~l~~~~~dg--~i~~~d 214 (814)
T 3mkq_A 149 NPKDPSTFASGCL-DR--TVKVWSLGQSTPNFTLTTG--QERG-----VNYVDYYP-LPDKP-YMITASDDL--TIKIWD 214 (814)
T ss_dssp ETTEEEEEEEEET-TS--EEEEEETTCSSCSEEEECC--CTTC-----CCEEEECC-STTCC-EEEEECTTS--EEEEEE
T ss_pred EcCCCCEEEEEeC-CC--eEEEEECCCCcceeEEecC--CCCC-----EEEEEEEE-CCCCC-EEEEEeCCC--EEEEEE
Confidence 99 7775555544 44 4666777665432222110 0001 11123331 00334 444444444 566778
Q ss_pred CCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 388 DFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 388 l~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.+++.. .+......+..+ ++++..++. ++. ...|.++|+.+++
T Consensus 215 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~---dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 215 YQTKSCVATLEGHMSNVSFAVFHPTLPIIIS-GSE---DGTLKIWNSSTYK 261 (814)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECSSSSEEEE-EET---TSCEEEEETTTCS
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE-EeC---CCeEEEEECCCCc
Confidence 8777643 343333344444 566665543 332 2567888877655
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.63 E-value=3.6e-06 Score=87.85 Aligned_cols=269 Identities=10% Similarity=-0.042 Sum_probs=138.7
Q ss_pred CCCCCcCCHHHHhcCCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeE
Q 008927 73 GSWKSPLTADVVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFR 151 (548)
Q Consensus 73 g~w~spit~~~l~~~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~ 151 (548)
+.|+.+.....+......+..+.++| |+.++..... +|...||.+....+...+.+..... ...+. .-.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~--~~~v~---~~~~s 158 (450)
T 2vdu_B 87 TAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS---DKSLLVFDVDKTSKNVLKLRKRFCF--SKRPN---AISIA 158 (450)
T ss_dssp -------------CCCCCEEEEEECTTSSEEEEEEGG---GTEEEEEEECSSSSSCEEEEEEEEC--SSCEE---EEEEC
T ss_pred cCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECC---CCeEEEEECcCCCCceeeeeecccC--CCCce---EEEEc
Confidence 33444433333333334678889999 7776666543 5777888876211122233321100 01111 13566
Q ss_pred EECCEEEEEeCCCCeEEEEeCCCCCCCce-----ecCCCCCCCCceecceeeCCC---CCEEEEEEeccCCCCCCceeEE
Q 008927 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPL-----PITPDYGEPLVSYADGIFDPR---FNRYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 152 ~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-----~lT~~~~~~~~~~~~~~~SpD---G~~i~~v~~~~~~~~~~~~~~l 223 (548)
+++..|+... .++.+|.+++.. ++.. .+... ...+..+.|+|| ++.|+....+ ..|
T Consensus 159 p~~~~l~~~~-~~g~v~~~~~~~--~~~~~~~~~~~~~h----~~~v~~~~~sp~~~~~~~l~s~~~d---------~~i 222 (450)
T 2vdu_B 159 EDDTTVIIAD-KFGDVYSIDINS--IPEEKFTQEPILGH----VSMLTDVHLIKDSDGHQFIITSDRD---------EHI 222 (450)
T ss_dssp TTSSEEEEEE-TTSEEEEEETTS--CCCSSCCCCCSEEC----SSCEEEEEEEECTTSCEEEEEEETT---------SCE
T ss_pred CCCCEEEEEe-CCCcEEEEecCC--cccccccceeeecc----cCceEEEEEcCCCCCCcEEEEEcCC---------CcE
Confidence 7777777665 578899999875 3322 22211 123556789999 7776654332 358
Q ss_pred EEEECCCCCccCcEE-eeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCC-------
Q 008927 224 VAIALNGQNIQEPKV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF------- 295 (548)
Q Consensus 224 ~~idl~~g~~~~~~~-L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~------- 295 (548)
.++|+.+++. ... +......+....|+ ||+.|+.... ...|.+.|+.. ++. ...+...
T Consensus 223 ~vwd~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~s~~~--------d~~v~vwd~~~-~~~--~~~~~~~~~~~~~~ 288 (450)
T 2vdu_B 223 KISHYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLLSAGG--------DDKIFAWDWKT-GKN--LSTFDYNSLIKPYL 288 (450)
T ss_dssp EEEEESCTTC--EEEECCCCSSCEEEEEEC-STTEEEEEES--------SSEEEEEETTT-CCE--EEEEECHHHHGGGC
T ss_pred EEEECCCCce--eeeeecCCCCceEEEEEC-CCCEEEEEeC--------CCeEEEEECCC-CcE--eeeecchhhhhhhh
Confidence 8888888761 223 22334457788999 9999885541 35788889874 542 1222100
Q ss_pred ----------------CCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEE-eccCCeeEeecccccccCCCcccccCc
Q 008927 296 ----------------DPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKW-IESNNEVLAIYSLDAEFSRPLWVFGIN 357 (548)
Q Consensus 296 ----------------~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~-d~~~g~~~~l~~~~~d~~~p~w~~~~~ 357 (548)
... ..+..+.|+|||+ |++.++. .+.-.||.+ +..+++.+.+...... .+. .
T Consensus 289 ~~~~~~~~~~~~~~~~~~~--~~v~~i~~~~~~~~l~~~~~~-d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v-----~ 358 (450)
T 2vdu_B 289 NDQHLAPPRFQNENNDIIE--FAVSKIIKSKNLPFVAFFVEA-TKCIIILEMSEKQKGDLALKQIITFP--YNV-----I 358 (450)
T ss_dssp CTTSBC----------CBC--CCEEEEEECSSSSEEEEEETT-CSEEEEEEECSSSTTCEEEEEEEECS--SCE-----E
T ss_pred hhcccccccccccccccce--EEEEEEEEeCCCCEEEEEECC-CCeEEEEEeccCCCCceeeccEeccC--Cce-----E
Confidence 001 3456789999999 5444534 555555555 2223333322211111 111 2
Q ss_pred ceeeeeecCCCCEEEEEEEe-C------CeEEEEEEECCCCceE
Q 008927 358 SYEIIQSHGEKNLIACSYRQ-N------GRSYLGILDDFGHSLS 394 (548)
Q Consensus 358 ~~~~~~~~~d~~~l~~~~~~-~------g~~~L~~~dl~~g~~~ 394 (548)
.+.|. . +.++++... + ..-.||.++.++++++
T Consensus 359 ~~~~~----~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 359 SLSAH----N-DEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EEEEE----T-TEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred EEEec----C-CcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 24565 3 344444332 1 1237888888777654
No 94
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.63 E-value=6.5e-06 Score=83.97 Aligned_cols=281 Identities=9% Similarity=0.043 Sum_probs=152.5
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEc----CCCCCCC-------CcccCCCCCCc-------cccceeeCCee
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKE----PAKAGDE-------PSDITPKEYAV-------RTTAQEYGGGA 149 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~----~~~~~~~-------~~~lt~~~~~~-------r~~v~~ygg~~ 149 (548)
..+..+.++| |..++..... +|...||.. ... + ...+.. .+.. ...+. .-.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~---dg~i~iw~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~---~~~ 115 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEK---NSVARLARIVETDQEG---KKYWKLTIIAELRH-PFALSASSGKTTNQVT---CLA 115 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEET---BTEEEEEEEEEC---------CEEEEEEEEEEC-CCCCC------CBCEE---EEE
T ss_pred CceEEEEECCCCCcEEEEecC---CceEEEEEEecccCCc---cccccccccccccc-cccccccccCCCCceE---EEE
Confidence 5678899999 7724444322 477777776 332 2 122211 1110 01111 125
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
|+++++.|+... .++.|++.+..+ .....+... ...+..+.|+|+++.|+....+ ..|.++|+.
T Consensus 116 ~s~~~~~l~~~~-~dg~i~i~~~~~--~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~ 179 (425)
T 1r5m_A 116 WSHDGNSIVTGV-ENGELRLWNKTG--ALLNVLNFH----RAPIVSVKWNKDGTHIISMDVE---------NVTILWNVI 179 (425)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEETTS--CEEEEECCC----CSCEEEEEECTTSSEEEEEETT---------CCEEEEETT
T ss_pred EcCCCCEEEEEe-CCCeEEEEeCCC--CeeeeccCC----CccEEEEEECCCCCEEEEEecC---------CeEEEEECC
Confidence 666677666654 466777778554 444555543 2346678899999988775433 358888998
Q ss_pred CCCccCcEEeeecCCc---------------eeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC
Q 008927 230 GQNIQEPKVLVSGSDF---------------YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG 294 (548)
Q Consensus 230 ~g~~~~~~~L~~~~~~---------------~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~ 294 (548)
+++. ...+...... .....|+|++. ++... ....|++.++.. ++ ....+..
T Consensus 180 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~g~i~~~d~~~-~~--~~~~~~~ 245 (425)
T 1r5m_A 180 SGTV--MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPG--------PKGAIFVYQITE-KT--PTGKLIG 245 (425)
T ss_dssp TTEE--EEEECCC---------------CCCBSCCEEEETTE-EEEEC--------GGGCEEEEETTC-SS--CSEEECC
T ss_pred CCcE--EEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEc--------CCCeEEEEEcCC-Cc--eeeeecc
Confidence 8761 2222222111 45567888865 43232 135799999884 43 2333443
Q ss_pred CCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEE
Q 008927 295 FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACS 374 (548)
Q Consensus 295 ~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~ 374 (548)
.. ..+..+.|+|||++++.... +| .|+.+++.+++....... ...+ .....+.| ++ ++++
T Consensus 246 ~~----~~i~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~---~~~~-----i~~~~~~~---~~--~l~~ 305 (425)
T 1r5m_A 246 HH----GPISVLEFNDTNKLLLSASD-DG--TLRIWHGGNGNSQNCFYG---HSQS-----IVSASWVG---DD--KVIS 305 (425)
T ss_dssp CS----SCEEEEEEETTTTEEEEEET-TS--CEEEECSSSBSCSEEECC---CSSC-----EEEEEEET---TT--EEEE
T ss_pred CC----CceEEEEECCCCCEEEEEcC-CC--EEEEEECCCCccceEecC---CCcc-----EEEEEECC---CC--EEEE
Confidence 33 45678899999995555444 34 466777766654332211 0111 12245553 44 4445
Q ss_pred EEeCCeEEEEEEECCCCceEe-ecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 375 YRQNGRSYLGILDDFGHSLSL-LDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 375 ~~~~g~~~L~~~dl~~g~~~~-l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
...++ .|+++|+.+++... +......+..+ +++++.++. ++. ...|.++|+.+++
T Consensus 306 ~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~---dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 306 CSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAV-AFM---DGQVNVYDLKKLN 363 (425)
T ss_dssp EETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEE-EET---TSCEEEEECHHHH
T ss_pred EeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEE-EEC---CCeEEEEECCCCc
Confidence 55455 56777887776443 33323334444 566665544 332 2578888876543
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.63 E-value=8.3e-06 Score=81.21 Aligned_cols=296 Identities=7% Similarity=-0.043 Sum_probs=149.0
Q ss_pred CCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEEC--CEEEEEeCCC
Q 008927 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG--DTVIFSNYKD 164 (548)
Q Consensus 88 ~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~--~~i~F~~~~~ 164 (548)
...+..+.++| |..++.......++|...||..... +...+...+ -...+. .-.|++++ +.++++...+
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~---~~~~~~~~~--~~~~v~---~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHG---DLKLLREIE--KAKPIK---CGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSS---SEEEEEEEE--ESSCEE---EEECTTCCTTTCCEEEEETT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCC---cccceeeec--ccCcEE---EEEEcCCCCCCceEEEecCC
Confidence 35677889999 7777665533223566677766432 322221100 011111 12455553 3445555567
Q ss_pred CeEEEEeCCCCCC-CceecCCCCCCCCceecce------eeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcE
Q 008927 165 QRLYKHSIDSKDS-SPLPITPDYGEPLVSYADG------IFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPK 237 (548)
Q Consensus 165 ~~Ly~~~~~~~~~-~~~~lT~~~~~~~~~~~~~------~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~ 237 (548)
+.|.+.++..+ . ....+.... ..+..+ .|+||++.|+....+ ..|.++|+.+++. ...
T Consensus 90 g~i~iwd~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~s~~~~~l~~~~~d---------~~i~vwd~~~~~~-~~~ 154 (357)
T 3i2n_A 90 GNLHIWNLEAP-EMPVYSVKGHK----EIINAIDGIGGLGIGEGAPEIVTGSRD---------GTVKVWDPRQKDD-PVA 154 (357)
T ss_dssp SCEEEECTTSC-SSCSEEECCCS----SCEEEEEEESGGGCC-CCCEEEEEETT---------SCEEEECTTSCSS-CSE
T ss_pred CeEEEEeCCCC-CccEEEEEecc----cceEEEeeccccccCCCccEEEEEeCC---------CeEEEEeCCCCCC-cce
Confidence 88888888762 2 234444331 122222 578999988765433 3588888887641 033
Q ss_pred EeeecCC----ceee----eEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceEC
Q 008927 238 VLVSGSD----FYAF----PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (548)
Q Consensus 238 ~L~~~~~----~~~~----p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ws 309 (548)
.+....+ .... +.|+|||+.|+... ....|++.++.. ++. ....... ..+....|+
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~-~~~---~~~~~~~----~~v~~~~~~ 218 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--------DNGDIKLFDLRN-MAL---RWETNIK----NGVCSLEFD 218 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--------TTSEEEEEETTT-TEE---EEEEECS----SCEEEEEES
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEc--------cCCeEEEEECcc-Cce---eeecCCC----CceEEEEcC
Confidence 3332111 2222 23899999887544 135799999984 432 2222222 457788999
Q ss_pred c---CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 310 S---KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 310 p---DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
| +++++++... +|. |+.+|+.+++............... ......+.| +++.++++...++.-.||-+
T Consensus 219 ~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~---~~~~~l~~~~~dg~i~iwd~ 289 (357)
T 3i2n_A 219 RKDISMNKLVATSL-EGK--FHVFDMRTQHPTKGFASVSEKAHKS---TVWQVRHLP---QNRELFLTAGGAGGLHLWKY 289 (357)
T ss_dssp CSSSSCCEEEEEES-TTE--EEEEEEEEEETTTEEEEEEEECCSS---CEEEEEEET---TEEEEEEEEETTSEEEEEEE
T ss_pred CCCCCCCEEEEECC-CCe--EEEEeCcCCCcccceeeeccCCCcC---CEEEEEECC---CCCcEEEEEeCCCcEEEeec
Confidence 9 8885555544 454 5555554443211110000000111 112245553 55546777777776666655
Q ss_pred ECCCCc------------------eEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 387 DDFGHS------------------LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 387 dl~~g~------------------~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
+..... +..+......+..+ +++++.+++.++. -..|.++|+.+.
T Consensus 290 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~---d~~i~iw~~~~~ 354 (357)
T 3i2n_A 290 EYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF---DQTVRVLIVTKL 354 (357)
T ss_dssp ECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET---TSEEEEEEECC-
T ss_pred CCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC---CCcEEEEECCCc
Confidence 532111 11122222234443 5677766655543 246777776543
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.62 E-value=2.8e-05 Score=79.60 Aligned_cols=278 Identities=9% Similarity=-0.039 Sum_probs=151.2
Q ss_pred CceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEEEEe
Q 008927 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (548)
Q Consensus 92 ~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~~~ 171 (548)
..+.++ ++.++-... +|...||..... +...+..... ...+. .-+|++++..|+... .++.|.+.+
T Consensus 97 ~~~~~s-~~~l~~~~~----d~~v~lw~~~~~---~~~~~~~~~~--~~~v~---~v~~s~~~~~l~~~~-~dg~i~iwd 162 (401)
T 4aez_A 97 NLLDWS-NLNVVAVAL----ERNVYVWNADSG---SVSALAETDE--STYVA---SVKWSHDGSFLSVGL-GNGLVDIYD 162 (401)
T ss_dssp BCEEEC-TTSEEEEEE----TTEEEEEETTTC---CEEEEEECCT--TCCEE---EEEECTTSSEEEEEE-TTSCEEEEE
T ss_pred EEEeec-CCCEEEEEC----CCeEEEeeCCCC---cEeEeeecCC--CCCEE---EEEECCCCCEEEEEC-CCCeEEEEE
Confidence 345666 666655432 466666765332 3333322110 11111 125667777666654 567888888
Q ss_pred CCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeE
Q 008927 172 IDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPR 250 (548)
Q Consensus 172 ~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~ 250 (548)
+.. ++. +.+... ...+..+.| +++.|+....+ ..|.++|+..... ....+......+....
T Consensus 163 ~~~--~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~d---------g~i~i~d~~~~~~-~~~~~~~~~~~v~~~~ 224 (401)
T 4aez_A 163 VES--QTKLRTMAGH----QARVGCLSW--NRHVLSSGSRS---------GAIHHHDVRIANH-QIGTLQGHSSEVCGLA 224 (401)
T ss_dssp TTT--CCEEEEECCC----SSCEEEEEE--ETTEEEEEETT---------SEEEEEETTSSSC-EEEEEECCSSCEEEEE
T ss_pred CcC--CeEEEEecCC----CCceEEEEE--CCCEEEEEcCC---------CCEEEEecccCcc-eeeEEcCCCCCeeEEE
Confidence 876 433 444432 234556667 55665554322 4688889985430 0233343444567789
Q ss_pred ECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEE
Q 008927 251 MDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHK 329 (548)
Q Consensus 251 ~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~ 329 (548)
|+|||+.|+.... ...|.+.|+.. ++ ....+.... ..+..+.|+|+|. +++.... .....|..
T Consensus 225 ~~~~~~~l~s~~~--------d~~v~iwd~~~-~~--~~~~~~~~~----~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i 288 (401)
T 4aez_A 225 WRSDGLQLASGGN--------DNVVQIWDARS-SI--PKFTKTNHN----AAVKAVAWCPWQSNLLATGGG-TMDKQIHF 288 (401)
T ss_dssp ECTTSSEEEEEET--------TSCEEEEETTC-SS--EEEEECCCS----SCCCEEEECTTSTTEEEEECC-TTTCEEEE
T ss_pred EcCCCCEEEEEeC--------CCeEEEccCCC-CC--ccEEecCCc----ceEEEEEECCCCCCEEEEecC-CCCCEEEE
Confidence 9999998885542 34688999874 43 233344333 5678899999988 7776531 11235778
Q ss_pred EeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEE-eCCeEEEEEEECCCCceEee---cCCCceeEe
Q 008927 330 WIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QNGRSYLGILDDFGHSLSLL---DIPFTDIDN 405 (548)
Q Consensus 330 ~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~-~~g~~~L~~~dl~~g~~~~l---~~~~~~~~~ 405 (548)
+|+.+++......... + .....|.| +++.|+.... .++. |.++|+.+++...+ ......+..
T Consensus 289 ~d~~~~~~~~~~~~~~----~-----v~~~~~s~---~~~~l~~~~g~~dg~--i~v~~~~~~~~~~~~~~~~h~~~v~~ 354 (401)
T 4aez_A 289 WNAATGARVNTVDAGS----Q-----VTSLIWSP---HSKEIMSTHGFPDNN--LSIWSYSSSGLTKQVDIPAHDTRVLY 354 (401)
T ss_dssp EETTTCCEEEEEECSS----C-----EEEEEECS---SSSEEEEEECTTTCE--EEEEEEETTEEEEEEEEECCSSCCCE
T ss_pred EECCCCCEEEEEeCCC----c-----EEEEEECC---CCCeEEEEeecCCCc--EEEEecCCccceeEEEecCCCCCEEE
Confidence 8887776543332111 1 12245554 6666654322 3454 55556656654432 222223333
Q ss_pred e--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 406 I--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 406 ~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+ ++++..|+.. +. ...|.++++.+++
T Consensus 355 ~~~s~dg~~l~s~-~~---dg~i~iw~~~~~~ 382 (401)
T 4aez_A 355 SALSPDGRILSTA-AS---DENLKFWRVYDGD 382 (401)
T ss_dssp EEECTTSSEEEEE-CT---TSEEEEEECCC--
T ss_pred EEECCCCCEEEEE-eC---CCcEEEEECCCCc
Confidence 3 6677765443 22 3678888887765
No 97
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.62 E-value=1.7e-05 Score=82.02 Aligned_cols=257 Identities=8% Similarity=-0.032 Sum_probs=133.5
Q ss_pred ECCEEEEEeCCC----CeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEecc-CCCCCCceeEEEEE
Q 008927 153 FGDTVIFSNYKD----QRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVAI 226 (548)
Q Consensus 153 ~~~~i~F~~~~~----~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~-~~~~~~~~~~l~~i 226 (548)
++.++|-.+... +.|+++|++. .+. ..|..+ ..- .+.+||||++|+...... +...++..+.|.+|
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t--~~vv~~I~vG-----~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST--GRILGMTDGG-----FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEEC-----SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC--CEEEEEEECC-----CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 455666666443 6899999987 433 334332 123 678999999875543210 00000123579999
Q ss_pred ECCCCCccCcEEeeec--C-----CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC-----
Q 008927 227 ALNGQNIQEPKVLVSG--S-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG----- 294 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~--~-----~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~----- 294 (548)
|+.+++. ...|.-+ . ..-....+||||++|+ +.... ....|.++|+.. +++.....+.+
T Consensus 155 D~~t~~v--v~~I~v~g~~r~~~g~~P~~~~~spDGk~ly-V~n~~-----~~~~VsVID~~t-~kvv~~I~v~g~~~~~ 225 (426)
T 3c75_H 155 DPVTFLP--IADIELPDAPRFLVGTYQWMNALTPDNKNLL-FYQFS-----PAPAVGVVDLEG-KTFDRMLDVPDCYHIF 225 (426)
T ss_dssp CTTTCCE--EEEEEETTCCCCCBSCCGGGSEECTTSSEEE-EEECS-----SSCEEEEEETTT-TEEEEEEECCSEEEEE
T ss_pred ECCCCcE--EEEEECCCccccccCCCcceEEEcCCCCEEE-EEecC-----CCCeEEEEECCC-CeEEEEEEcCCceeec
Confidence 9999872 2333322 1 1123458999999875 54221 135688888774 43211111100
Q ss_pred --C---------C---------CCcc-------------cCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEee
Q 008927 295 --F---------D---------PTIV-------------ESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAI 340 (548)
Q Consensus 295 --~---------~---------~~~~-------------~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l 340 (548)
+ + .... .....+.+++||+ ++|++. .+ .++.+|..+++.+.+
T Consensus 226 p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~--~g--~V~ViD~~~~~~~v~ 301 (426)
T 3c75_H 226 PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY--TG--KIFQADLTAEGATFR 301 (426)
T ss_dssp EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT--TS--EEEEEEECSSCEEEC
T ss_pred cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC--CC--cEEEEeccCCceEEe
Confidence 0 0 0000 0001234566666 555543 22 578888766554322
Q ss_pred ccc----ccccCCCccccc-CcceeeeeecCCCCEEEEEEEeC-------CeEEEEEEECCCCceE-eecCCCcee-Eee
Q 008927 341 YSL----DAEFSRPLWVFG-INSYEIIQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSLS-LLDIPFTDI-DNI 406 (548)
Q Consensus 341 ~~~----~~d~~~p~w~~~-~~~~~~~~~~~d~~~l~~~~~~~-------g~~~L~~~dl~~g~~~-~l~~~~~~~-~~~ 406 (548)
.+. .... ...|..+ ...+.+.+ +++++|+..... +...|.++|+.+.++. .+..+..-. -.+
T Consensus 302 ~~~~~~~~~~i-~~g~~p~g~~~va~s~---dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~ 377 (426)
T 3c75_H 302 APIEALTEAER-ADDWRPGGWQQTAYHR---QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINV 377 (426)
T ss_dssp CCEESSCTTTG-GGTEEECSSSCEEEEG---GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEE
T ss_pred eeeeecccccc-ccccccCCceeeEEcC---CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEE
Confidence 110 0000 0122221 11234544 778887765432 3468999999988754 454322111 123
Q ss_pred eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 407 TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 407 s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
++|++.++|+... ....|.++|+.+++.
T Consensus 378 spDg~~~lyv~n~--~s~~VsVID~~t~kv 405 (426)
T 3c75_H 378 SQDAEPLLYALSA--GTQTLHIYDAATGEE 405 (426)
T ss_dssp CCSSSCEEEEEET--TTTEEEEEETTTCCE
T ss_pred ccCCCEEEEEEcC--CCCeEEEEECCCCCE
Confidence 7888834455542 247899999988874
No 98
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.61 E-value=3.3e-06 Score=83.37 Aligned_cols=233 Identities=13% Similarity=0.148 Sum_probs=128.5
Q ss_pred CeeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 147 GGAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 147 g~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
|..|.++++.|+|++..++.|++++.+ ++.+.+... ......+.++|||+.+++ +.. ...|+++
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~~---g~~~~~~~~----~~~~~gl~~d~dG~l~v~--~~~-------~~~v~~~ 112 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRED---GTVDVLLDA----TAFTNGNAVDAQQRLVHC--EHG-------RRAITRS 112 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETT---SCEEEEEES----CSCEEEEEECTTSCEEEE--ETT-------TTEEEEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeCC---CCEEEEeCC----CCccceeeECCCCCEEEE--ECC-------CCEEEEE
Confidence 457888888999999888899999985 445544432 123456789999985443 322 1368999
Q ss_pred ECCCCCccCcEEeeec-CC----ceeeeEECCCCCEEEEEEec-----C-----CCC-CCCCceEEEEEecCCCceeeeE
Q 008927 227 ALNGQNIQEPKVLVSG-SD----FYAFPRMDPRGERMAWIEWH-----H-----PNM-PWDKAELWVGYISENGDVYKRV 290 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~-~~----~~~~p~~SPDGk~La~~~~~-----~-----~~~-p~~~~~L~v~~~~~~g~~~~~~ 290 (548)
+.+ |+ .+.+... .. ......++|||+ | |++.. . ... ......||.++.+ +|++.
T Consensus 113 ~~~-g~---~~~~~~~~~~~~~~~~~~i~~d~dG~-l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~--- 182 (305)
T 3dr2_A 113 DAD-GQ---AHLLVGRYAGKRLNSPNDLIVARDGA-I-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQ--- 182 (305)
T ss_dssp CTT-SC---EEEEECEETTEECSCCCCEEECTTSC-E-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCE---
T ss_pred CCC-CC---EEEEEeccCCCccCCCCCEEECCCCC-E-EEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEE---
Confidence 987 55 5555422 11 123568999998 4 34210 0 000 0013578888875 35432
Q ss_pred EEcCCCCCcccCCcCceECcCCcEEEEEeCCC---CeeeEEEEeccCCeeE--eecccccccCCCcccccCcceeeeeec
Q 008927 291 CVAGFDPTIVESPTEPKWSSKGELFFVTDRKN---GFWNLHKWIESNNEVL--AIYSLDAEFSRPLWVFGINSYEIIQSH 365 (548)
Q Consensus 291 ~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~---g~~~Ly~~d~~~g~~~--~l~~~~~d~~~p~w~~~~~~~~~~~~~ 365 (548)
.+.+ . .....+.|+|||+.+|+++... +...|++++++++... .+... .....| ..+...+
T Consensus 183 ~~~~-~----~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~~~~~p------dgi~~d~-- 248 (305)
T 3dr2_A 183 RMAD-L----DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-VPDGLP------DGFCVDR-- 248 (305)
T ss_dssp EEEE-E----SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC-CSSSCC------CSEEECT--
T ss_pred EEec-C----CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-CCCCCC------CeEEECC--
Confidence 2222 1 2345678999999444444311 2357888887655421 11100 001111 1133331
Q ss_pred CCCCEEEEEEEeCCeEEEEEEECCCCceEeecCCCceeEe--eeecCCEEEEEEecCCCCCeEEEEEc
Q 008927 366 GEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTL 431 (548)
Q Consensus 366 ~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~ 431 (548)
+++ |++.. . ..|++++.++.....+..+.. ... ++++++.|++..+ ..||++++
T Consensus 249 -~G~-lwv~~-~---~gv~~~~~~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~-----~~l~~~~~ 304 (305)
T 3dr2_A 249 -GGW-LWSSS-G---TGVCVFDSDGQLLGHIPTPGT-ASNCTFDQAQQRLFITGG-----PCLWMLPL 304 (305)
T ss_dssp -TSC-EEECC-S---SEEEEECTTSCEEEEEECSSC-CCEEEECTTSCEEEEEET-----TEEEEEEC
T ss_pred -CCC-EEEec-C---CcEEEECCCCCEEEEEECCCc-eeEEEEeCCCCEEEEEcC-----CeEEEEEC
Confidence 444 55433 2 248999986655566655432 222 2456677766553 37888764
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.60 E-value=6.3e-06 Score=92.41 Aligned_cols=246 Identities=11% Similarity=0.077 Sum_probs=144.2
Q ss_pred CCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 88 ~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
...+..+.++| |..++... .+|...||..... ...+.+......++ ...|++++..|+... .++.
T Consensus 13 ~~~v~~i~~sp~~~~la~~~----~~g~v~iwd~~~~--~~~~~~~~~~~~v~-------~~~~s~~~~~l~~~~-~dg~ 78 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTL----YSGRVEIWNYETQ--VEVRSIQVTETPVR-------AGKFIARKNWIIVGS-DDFR 78 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT--EEEEEEECCSSCEE-------EEEEEGGGTEEEEEE-TTSE
T ss_pred CCceEEEEECCCCCEEEEEe----CCCEEEEEECCCC--ceEEEEecCCCcEE-------EEEEeCCCCEEEEEe-CCCe
Confidence 35677889999 77776654 2577777765432 22333432221221 236888888888876 4678
Q ss_pred EEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCc
Q 008927 167 LYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF 245 (548)
Q Consensus 167 Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~ 245 (548)
|.+.++.. ++. ..+... ...+..+.|+|||+.|+....+ ..|.++|+.++.. ....+......
T Consensus 79 i~vw~~~~--~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~vw~~~~~~~-~~~~~~~~~~~ 142 (814)
T 3mkq_A 79 IRVFNYNT--GEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWENNWA-LEQTFEGHEHF 142 (814)
T ss_dssp EEEEETTT--CCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEEGGGTSE-EEEEEECCSSC
T ss_pred EEEEECCC--CcEEEEEecC----CCCEEEEEEeCCCCEEEEEcCC---------CEEEEEECCCCce-EEEEEcCCCCc
Confidence 88888876 443 444433 2346678899999988765433 3688888887630 02333333445
Q ss_pred eeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc--CCcEEEEEeCCC
Q 008927 246 YAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKN 322 (548)
Q Consensus 246 ~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp--DG~L~~~sd~~~ 322 (548)
.....|+| ||+.|+.... ...|.+.++.. +. ....+.... . ..+....|+| ||.++++... +
T Consensus 143 v~~~~~~p~~~~~l~~~~~--------dg~v~vwd~~~-~~--~~~~~~~~~-~--~~v~~~~~~~~~~~~~l~~~~~-d 207 (814)
T 3mkq_A 143 VMCVAFNPKDPSTFASGCL--------DRTVKVWSLGQ-ST--PNFTLTTGQ-E--RGVNYVDYYPLPDKPYMITASD-D 207 (814)
T ss_dssp EEEEEEETTEEEEEEEEET--------TSEEEEEETTC-SS--CSEEEECCC-T--TCCCEEEECCSTTCCEEEEECT-T
T ss_pred EEEEEEEcCCCCEEEEEeC--------CCeEEEEECCC-Cc--ceeEEecCC-C--CCEEEEEEEECCCCCEEEEEeC-C
Confidence 67789999 8887775441 35788999874 33 122232221 1 4567789999 8885555544 4
Q ss_pred CeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 323 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 323 g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
| .|..+|..+++........ ..+ .....|.| +++.| ++...+|. |.++|+.+++..
T Consensus 208 g--~i~~~d~~~~~~~~~~~~~---~~~-----v~~~~~~~---~~~~l-~~~~~dg~--v~vwd~~~~~~~ 263 (814)
T 3mkq_A 208 L--TIKIWDYQTKSCVATLEGH---MSN-----VSFAVFHP---TLPII-ISGSEDGT--LKIWNSSTYKVE 263 (814)
T ss_dssp S--EEEEEETTTTEEEEEEECC---SSC-----EEEEEECS---SSSEE-EEEETTSC--EEEEETTTCSEE
T ss_pred C--EEEEEECCCCcEEEEEcCC---CCC-----EEEEEEcC---CCCEE-EEEeCCCe--EEEEECCCCcEE
Confidence 4 5677777777643322110 111 11234553 55544 44444554 566688777643
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.60 E-value=2.1e-05 Score=77.93 Aligned_cols=274 Identities=8% Similarity=-0.025 Sum_probs=146.9
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCC----CcccCCCCCCccccceeeCCeeeEEECC-EEEEEeC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDE----PSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNY 162 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~----~~~lt~~~~~~r~~v~~ygg~~~~~~~~-~i~F~~~ 162 (548)
..+..+.++| |+.++... .+|...||..... . .+.+.... ..+. ...|++++. .|+.. .
T Consensus 12 ~~v~~~~~s~~~~~l~~~~----~d~~v~iw~~~~~---~~~~~~~~~~~~~----~~v~---~~~~~~~~~~~l~~~-~ 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQ---AKNVDLLQSLRYK----HPLL---CCNFIDNTDLQIYVG-T 76 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEE----TTSEEEEEEEETT---TTEEEEEEEEECS----SCEE---EEEEEESSSEEEEEE-E
T ss_pred CcEEEEEEcCCCCEEEEEc----CCCeEEEEEeCCC---CccccceeeeecC----CceE---EEEECCCCCcEEEEE-c
Confidence 4567788998 66665443 2477777766443 2 22222111 1111 136788877 55554 4
Q ss_pred CCCeEEEEeC-CCCCCCceecCC--CCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCC---------
Q 008927 163 KDQRLYKHSI-DSKDSSPLPITP--DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG--------- 230 (548)
Q Consensus 163 ~~~~Ly~~~~-~~~~~~~~~lT~--~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~--------- 230 (548)
.++.|++.++ .+ ++...+.. . ...+..+.|+| ++.|+....+ ..|.++|+.+
T Consensus 77 ~dg~i~~wd~~~~--~~~~~~~~~~~----~~~v~~l~~~~-~~~l~s~~~d---------~~i~iwd~~~~~~~~~~~~ 140 (342)
T 1yfq_A 77 VQGEILKVDLIGS--PSFQALTNNEA----NLGICRICKYG-DDKLIAASWD---------GLIEVIDPRNYGDGVIAVK 140 (342)
T ss_dssp TTSCEEEECSSSS--SSEEECBSCCC----CSCEEEEEEET-TTEEEEEETT---------SEEEEECHHHHTTBCEEEE
T ss_pred CCCeEEEEEeccC--CceEeccccCC----CCceEEEEeCC-CCEEEEEcCC---------CeEEEEccccccccccccc
Confidence 6788999998 76 66666654 3 23456778999 8877665433 3678888876
Q ss_pred CCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc
Q 008927 231 QNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 231 g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp 310 (548)
++ ...............|+|++ |+... ....|.+.++...+............ ..+....|+|
T Consensus 141 ~~---~~~~~~~~~~v~~~~~~~~~--l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~----~~i~~i~~~~ 203 (342)
T 1yfq_A 141 NL---NSNNTKVKNKIFTMDTNSSR--LIVGM--------NNSQVQWFRLPLCEDDNGTIEESGLK----YQIRDVALLP 203 (342)
T ss_dssp ES---CSSSSSSCCCEEEEEECSSE--EEEEE--------STTEEEEEESSCCTTCCCEEEECSCS----SCEEEEEECS
T ss_pred CC---eeeEEeeCCceEEEEecCCc--EEEEe--------CCCeEEEEECCccccccceeeecCCC----CceeEEEECC
Confidence 44 22222233446677899988 54333 13579999987413211112222222 4567789999
Q ss_pred -CCcEEEEEeCCCCeeeEEEEeccC-----CeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEE
Q 008927 311 -KGELFFVTDRKNGFWNLHKWIESN-----NEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (548)
Q Consensus 311 -DG~L~~~sd~~~g~~~Ly~~d~~~-----g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~ 384 (548)
||+++++... +|.-.||.++..+ .....+....................+.| +++.|+ +...+| .|+
T Consensus 204 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~-~~~~dg--~i~ 276 (342)
T 1yfq_A 204 KEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP---RHKFLY-TAGSDG--IIS 276 (342)
T ss_dssp GGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT---TTCCEE-EEETTS--CEE
T ss_pred CCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC---CCCEEE-EecCCc--eEE
Confidence 9996666555 6666666665431 11222211100000000000112345554 555554 444455 467
Q ss_pred EEECCCCceE-eecCC-CceeEeeeecCCEEEEEE
Q 008927 385 ILDDFGHSLS-LLDIP-FTDIDNITLGNDCLFVEG 417 (548)
Q Consensus 385 ~~dl~~g~~~-~l~~~-~~~~~~~s~d~~~l~~~~ 417 (548)
++|+.+++.. .+... ...+..+.++++.|+...
T Consensus 277 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s 311 (342)
T 1yfq_A 277 CWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311 (342)
T ss_dssp EEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEE
T ss_pred EEcCccHhHhhhhhcccCCCceEecCCCCeEEEEe
Confidence 7788877643 34333 334544455556554443
No 101
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.60 E-value=1e-05 Score=77.98 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=120.4
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|.++++.|++++...+.|+++++++ +..+.+.... ......+.++|+++.|++. ... ...|+++++
T Consensus 42 ~~d~~~~~ly~~d~~~~~I~~~~~~g--~~~~~~~~~~---~~~p~~ia~d~~~~~lyv~-d~~-------~~~I~~~~~ 108 (267)
T 1npe_A 42 AFDCVDKVVYWTDISEPSIGRASLHG--GEPTTIIRQD---LGSPEGIALDHLGRTIFWT-DSQ-------LDRIEVAKM 108 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEESSS--CCCEEEECTT---CCCEEEEEEETTTTEEEEE-ETT-------TTEEEEEET
T ss_pred EEecCCCEEEEEECCCCEEEEEecCC--CCcEEEEECC---CCCccEEEEEecCCeEEEE-ECC-------CCEEEEEEc
Confidence 45555779999998888999999987 5555443220 1234467789988887664 321 247999999
Q ss_pred CCCCccCcEEeeecC-CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 229 NGQNIQEPKVLVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~-~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
++.. .+.+.... ..-...+++|++.+|+|..+.. ....|++++++ |.. ...+.... - .....+.
T Consensus 109 ~g~~---~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~d--g~~--~~~~~~~~-~--~~P~gia 173 (267)
T 1npe_A 109 DGTQ---RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMD--GTN--RRILAQDN-L--GLPNGLT 173 (267)
T ss_dssp TSCS---CEEEECSSCSSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETT--SCC--CEEEECTT-C--SCEEEEE
T ss_pred CCCC---EEEEEECCCCCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecC--CCC--cEEEEECC-C--CCCcEEE
Confidence 8765 55554322 2334567999988887665321 13579988886 321 22222111 0 2345678
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+++|++.+|++|. +...|++++++++..+.+... ...|. + .+. +++.||++. .+...|+++|
T Consensus 174 ~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~---~~~P~---g---i~~-----d~~~lyva~--~~~~~v~~~d 235 (267)
T 1npe_A 174 FDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEG---LQYPF---A---VTS-----YGKNLYYTD--WKTNSVIAMD 235 (267)
T ss_dssp EETTTTEEEEEET--TTTEEEEEETTEEEEEEEEEC---CCSEE---E---EEE-----ETTEEEEEE--TTTTEEEEEE
T ss_pred EcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecC---CCCce---E---EEE-----eCCEEEEEE--CCCCeEEEEe
Confidence 9999885555555 234799999876554444321 11221 1 222 567777643 2334688999
Q ss_pred CCCCceE
Q 008927 388 DFGHSLS 394 (548)
Q Consensus 388 l~~g~~~ 394 (548)
.++|+..
T Consensus 236 ~~~g~~~ 242 (267)
T 1npe_A 236 LAISKEM 242 (267)
T ss_dssp TTTTEEE
T ss_pred CCCCCce
Confidence 8877643
No 102
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.59 E-value=1.5e-06 Score=88.37 Aligned_cols=194 Identities=9% Similarity=-0.052 Sum_probs=114.6
Q ss_pred eeEEECCEEEEEe-CCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRIFGDTVIFSN-YKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~~~~~i~F~~-~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+|+|||..|+... ..++.|.+.++.. ++.. .+... ..+.++.|||||+.|+... + ..+.++
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~--~~~~~~~~~~-----~~V~~v~fspdg~~l~s~s-~---------~~~~~~ 202 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSD--LTEKFEIETR-----GEVKDLHFSTDGKVVAYIT-G---------SSLEVI 202 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTT--TEEEEEEECS-----SCCCEEEECTTSSEEEEEC-S---------SCEEEE
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCC--CcEEEEeCCC-----CceEEEEEccCCceEEecc-c---------eeEEEE
Confidence 6888888877654 3467788888876 4433 33221 2466789999999887753 2 236777
Q ss_pred ECCCCCccCcEE-e-eec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCce--eeeEEEcCCCCCccc
Q 008927 227 ALNGQNIQEPKV-L-VSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV--YKRVCVAGFDPTIVE 301 (548)
Q Consensus 227 dl~~g~~~~~~~-L-~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~--~~~~~l~~~~~~~~~ 301 (548)
+..+++ ... . ..+ ...+...+|||||+.|+..+.+.. ....++..++.. +.. .....+.+.. .
T Consensus 203 ~~~~~~---~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~----~~~~i~~~~~~~-~~~~~~~~~~~~~~~----~ 270 (365)
T 4h5i_A 203 STVTGS---CIARKTDFDKNWSLSKINFIADDTVLIAASLKKG----KGIVLTKISIKS-GNTSVLRSKQVTNRF----K 270 (365)
T ss_dssp ETTTCC---EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS----CCEEEEEEEEET-TEEEEEEEEEEESSC----S
T ss_pred EeccCc---ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc----ceeEEeeccccc-ceecceeeeeecCCC----C
Confidence 887775 222 1 122 233567789999999886654322 123566667653 321 1122344433 4
Q ss_pred CCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEe-ecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCe
Q 008927 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 380 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~-l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~ 380 (548)
.+....|+|||++++.... ++ .|.++|+.+++... +... ...+ ....+|+| |++.| ++...++.
T Consensus 271 ~V~~~~~Spdg~~lasgs~-D~--~V~iwd~~~~~~~~~~~~g-----H~~~---V~~v~fSp---dg~~l-aS~S~D~t 335 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASN-DN--SIALVKLKDLSMSKIFKQA-----HSFA---ITEVTISP---DSTYV-ASVSAANT 335 (365)
T ss_dssp CEEEEEECTTSCEEEEEET-TS--CEEEEETTTTEEEEEETTS-----SSSC---EEEEEECT---TSCEE-EEEETTSE
T ss_pred CeEeEEECCCCCceEEEcC-CC--EEEEEECCCCcEEEEecCc-----ccCC---EEEEEECC---CCCEE-EEEeCCCe
Confidence 5777899999995555433 33 47777888877532 3211 1111 12356765 66544 56667777
Q ss_pred EEEEEE
Q 008927 381 SYLGIL 386 (548)
Q Consensus 381 ~~L~~~ 386 (548)
-+|+-+
T Consensus 336 vrvw~i 341 (365)
T 4h5i_A 336 IHIIKL 341 (365)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 666644
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.59 E-value=1.3e-05 Score=82.01 Aligned_cols=243 Identities=10% Similarity=0.057 Sum_probs=134.2
Q ss_pred EEECCEEEEE--eCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 151 RIFGDTVIFS--NYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 151 ~~~~~~i~F~--~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+.+.+.+++. ...++.|.+.+++.. +.. +.+.... .....+..+.|+| +++.|+....+ ..|.++
T Consensus 41 ~~~~~~~~~~~~~~~~g~i~v~~~~~~-~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d---------g~v~vw 109 (402)
T 2aq5_A 41 AVNPKFMALICEASGGGAFLVLPLGKT-GRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGSED---------CTVMVW 109 (402)
T ss_dssp EECSSEEEEEBCCSSSCCEEEEETTCC-EECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEETT---------SEEEEE
T ss_pred EECCCeEEEEEEEcCCCEEEEEECccC-CCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEeCC---------CeEEEE
Confidence 3445544443 445778888888541 211 1111110 0123466788999 88876665433 367888
Q ss_pred ECCCCCc-----cCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE--cCCCCCc
Q 008927 227 ALNGQNI-----QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV--AGFDPTI 299 (548)
Q Consensus 227 dl~~g~~-----~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l--~~~~~~~ 299 (548)
|+.++.. .....+......+....|+|||+.+++.... ...|.+.|+.. ++ ....+ ....
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~~-~~--~~~~~~~~~~~--- 176 (402)
T 2aq5_A 110 EIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-------DNVILVWDVGT-GA--AVLTLGPDVHP--- 176 (402)
T ss_dssp ECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-------TSCEEEEETTT-TE--EEEEECTTTCC---
T ss_pred EccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-------CCEEEEEECCC-CC--ccEEEecCCCC---
Confidence 8887631 0134454445557788999999644434422 34688889884 43 23344 3333
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec-ccccccCCCcccccCcceeeeeecCCCCEEEEEEE-e
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-Q 377 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~-~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~-~ 377 (548)
..+....|+|||++++.... +| .|..+|+.+++..... .... .. ......|.+ ++ .++++.. .
T Consensus 177 -~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~---~~----~~~~~~~~~---~~-~~l~~g~~~ 241 (402)
T 2aq5_A 177 -DTIYSVDWSRDGALICTSCR-DK--RVRVIEPRKGTVVAEKDRPHE---GT----RPVHAVFVS---EG-KILTTGFSR 241 (402)
T ss_dssp -SCEEEEEECTTSSCEEEEET-TS--EEEEEETTTTEEEEEEECSSC---SS----SCCEEEECS---TT-EEEEEEECT
T ss_pred -CceEEEEECCCCCEEEEEec-CC--cEEEEeCCCCceeeeeccCCC---CC----cceEEEEcC---CC-cEEEEeccC
Confidence 46788999999994444444 34 5777888777654332 1110 00 012244553 44 4444432 2
Q ss_pred CCeEEEEEEECCCCce--EeecCC-CceeEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 378 NGRSYLGILDDFGHSL--SLLDIP-FTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 378 ~g~~~L~~~dl~~g~~--~~l~~~-~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.....|.++|+.+++. .....+ ...+.. ++++++.+++.++. -..|.++|+.+++
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~---dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG---DSSIRYFEITSEA 301 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT---CSCEEEEEECSST
T ss_pred CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC---CCeEEEEEecCCC
Confidence 3456788889877643 222221 122332 36778877666532 2468888887665
No 104
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.58 E-value=1e-05 Score=82.41 Aligned_cols=249 Identities=12% Similarity=0.054 Sum_probs=132.7
Q ss_pred eeeEEECCEEEEEeC---------CCCeEEEEeCCCCCCCce-ecCCCCCCC---CceecceeeCCCCCEEEEEEeccCC
Q 008927 148 GAFRIFGDTVIFSNY---------KDQRLYKHSIDSKDSSPL-PITPDYGEP---LVSYADGIFDPRFNRYVTVREDRRQ 214 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~---------~~~~Ly~~~~~~~~~~~~-~lT~~~~~~---~~~~~~~~~SpDG~~i~~v~~~~~~ 214 (548)
-.++|||++||..+. +++.|.++|..+ .+.. .|.-..+.. ...-..+.+||||++++......
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t--~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-- 158 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT--LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-- 158 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS--
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC--CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC--
Confidence 356778888877752 245799999987 4442 332110000 01233578999999965542221
Q ss_pred CCCCceeEEEEEECCCCCccCcEEeeecCCce--------eeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCce
Q 008927 215 DALNSTTEIVAIALNGQNIQEPKVLVSGSDFY--------AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 286 (548)
Q Consensus 215 ~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~--------~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~ 286 (548)
.+.|.+||+++++. ...|. -++.. .....++||+. +|+..... ..+ + +...
T Consensus 159 -----~~~VsVID~~t~~v--v~tI~-v~g~~~~~P~g~~~~~~~~~DG~~-~~v~~~~~------g~v-~-~~~~---- 217 (386)
T 3sjl_D 159 -----APAVGVVDLEGKAF--KRMLD-VPDCYHIFPTAPDTFFMHCRDGSL-AKVAFGTE------GTP-E-ITHT---- 217 (386)
T ss_dssp -----SCEEEEEETTTTEE--EEEEE-CCSEEEEEEEETTEEEEEETTSCE-EEEECCSS------SCC-E-EEEC----
T ss_pred -----CCeEEEEECCCCcE--EEEEE-CCCcceeecCCCceeEEECCCCCE-EEEECCCC------CeE-E-Eeec----
Confidence 25799999999872 22332 11110 11245666663 33432211 111 0 1000
Q ss_pred eeeEEEcCCCCCcccCCcCceEC-cCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccc--cc-cCCCcccccC-cceee
Q 008927 287 YKRVCVAGFDPTIVESPTEPKWS-SKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD--AE-FSRPLWVFGI-NSYEI 361 (548)
Q Consensus 287 ~~~~~l~~~~~~~~~~~~~~~ws-pDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~--~d-~~~p~w~~~~-~~~~~ 361 (548)
..+.... . .....+.|. +||+++|+++. | ++|.+|..++..+.+.+.. .+ .-.+.|..+. ..+..
T Consensus 218 ---~~~~~~~-~--~~~~~~~~~~~dG~~~~vs~~--g--~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~ 287 (386)
T 3sjl_D 218 ---EVFHPED-E--FLINHPAYSQKAGRLVWPTYT--G--KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAY 287 (386)
T ss_dssp ---CCCSCTT-S--CBCSCCEEETTTTEEEEEBTT--S--EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEE
T ss_pred ---ceecccc-c--cccccceeEcCCCcEEEEeCC--C--EEEEEECCCCcceeecceeccccccccccccCCCcceeeE
Confidence 0011111 1 122346774 78998888774 3 6999998766543322110 00 0013444432 23444
Q ss_pred eeecCCCCEEEEEEEeC-------CeEEEEEEECCCCceE-eecCCCceeE-eeeecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 362 IQSHGEKNLIACSYRQN-------GRSYLGILDDFGHSLS-LLDIPFTDID-NITLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 362 ~~~~~d~~~l~~~~~~~-------g~~~L~~~dl~~g~~~-~l~~~~~~~~-~~s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
.+ +++++|.....+ .-.+++++|++++++. .+..+..... .+++|++.++|+.+. ....|.++|..
T Consensus 288 ~~---~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~ 362 (386)
T 3sjl_D 288 HR---ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAE 362 (386)
T ss_dssp ET---TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET--TTTEEEEEETT
T ss_pred CC---CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC--CCCeEEEEECC
Confidence 43 788888876532 2468999999998754 4444321111 237888755555543 34689999998
Q ss_pred CCce
Q 008927 433 DHKL 436 (548)
Q Consensus 433 ~~~~ 436 (548)
+++.
T Consensus 363 t~k~ 366 (386)
T 3sjl_D 363 SGEE 366 (386)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 8874
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.57 E-value=4.7e-05 Score=77.08 Aligned_cols=292 Identities=10% Similarity=0.058 Sum_probs=151.4
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCC---------CCccccceeeCCeeeEEECCEEE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE---------YAVRTTAQEYGGGAFRIFGDTVI 158 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~---------~~~r~~v~~ygg~~~~~~~~~i~ 158 (548)
..+..+.++| .+..+..... +|...||..... .....+.... ......+. .-.|+++++.++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~---dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~l 115 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS---DGVIVLYDLENS--SRQSYYTCKAVCSIGRDHPDVHRYSVE---TVQWYPHDTGMF 115 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET---TSCEEEEECCCC--SSSSCEEECEEEEECTTCTTCCSSCEE---EEEECTTCTTCE
T ss_pred CcEEEEEEecCCCCEEEEEcC---CCeEEEEECCCC--cccceEeccccccccccccccCCCcEE---EEEEccCCCcEE
Confidence 4667788888 6666555443 577778876543 1222221000 00011110 124555344455
Q ss_pred EEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCC---CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 159 FSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP---RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 159 F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~Sp---DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
++...++.|.+.++.. ++........ .......++| ++..|+....+ ..|.++|+.+++.
T Consensus 116 ~s~~~d~~i~iwd~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~d~~~~~~-- 178 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNT--LQTADVFNFE----ETVYSHHMSPVSTKHCLVAVGTRG---------PKVQLCDLKSGSC-- 178 (408)
T ss_dssp EEEETTSEEEEEETTT--TEEEEEEECS----SCEEEEEECSSCSSCCEEEEEESS---------SSEEEEESSSSCC--
T ss_pred EEEeCCCeEEEeeCCC--CccceeccCC----CceeeeEeecCCCCCcEEEEEcCC---------CeEEEEeCCCcce--
Confidence 5555678888889876 4443332221 1234455666 44466554332 3588889988762
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE---------------cCCCCCcc
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV---------------AGFDPTIV 300 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l---------------~~~~~~~~ 300 (548)
...+......+....|+|||++++++... ...|.+.++..... ....+ ....
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~-------dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---- 245 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASA-------DSRVKLWDVRRASG--CLITLDQHNGKKSQAVESANTAHN---- 245 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEET-------TSCEEEEETTCSSC--CSEECCTTTTCSCCCTTTSSCSCS----
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcC-------CCcEEEEECCCCCc--ccccccccccccceeecccccccc----
Confidence 34454445556778999999975544422 34688888864321 11222 1111
Q ss_pred cCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeeccccc-ccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 301 ESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDA-EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 301 ~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~-d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
..+..+.|+|||++++.... +| .|..+++.+++......... ...... ..+.... ..+..+++. ..++
T Consensus 246 ~~v~~~~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~~~-~~~~ 314 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVGT-DN--RMRLWNSSNGENTLVNYGKVCNNSKKG-----LKFTVSC--GCSSEFVFV-PYGS 314 (408)
T ss_dssp SCEEEEEECTTSSEEEEEET-TS--CEEEEETTTCCBCCCCCCCCCCCCSSC-----CCCEECC--SSSSCEEEE-EETT
T ss_pred CceeEEEEcCCCCEEEEecC-CC--eEEEEECCCCccceecccccccccccc-----ceeEEec--CCCceEEEE-ecCC
Confidence 34667899999995555443 34 46777777766432221100 000000 0011110 023444444 3344
Q ss_pred eEEEEEEECCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 380 RSYLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.|.++|+.+++.. .+......+..+ +++++.|+ +++. -..|.++|++.++
T Consensus 315 --~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~---dg~i~iw~~~~~~ 367 (408)
T 4a11_B 315 --TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELY-SGSR---DCNILAWVPSLYE 367 (408)
T ss_dssp --EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEE-EEET---TSCEEEEEECC--
T ss_pred --EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEE-EECC---CCeEEEEeCCCCC
Confidence 5777888887654 343333345544 66776654 3332 2568888887665
No 106
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.57 E-value=2.3e-05 Score=79.42 Aligned_cols=103 Identities=7% Similarity=0.046 Sum_probs=60.0
Q ss_pred CCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCC-CCCCceeEEEEEECCCCCccCcEEeee
Q 008927 164 DQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVAIALNGQNIQEPKVLVS 241 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~-~~~~~~~~l~~idl~~g~~~~~~~L~~ 241 (548)
++.||++|.+. ++.. .+..+ ..- .+.+||||++++...+.... ..++....|.++|+.+++. ...+.-
T Consensus 30 d~~v~v~D~~t--~~~~~~i~~g-----~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~--~~~i~~ 99 (361)
T 2oiz_A 30 ESRVHVYDYTN--GKFLGMVPTA-----FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF--EKEISL 99 (361)
T ss_dssp GCEEEEEETTT--CCEEEEEECC-----EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE--EEEEEE
T ss_pred cCeEEEEECCC--CeEEEEecCC-----CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE--EEEEEc
Confidence 46899999876 5443 33222 223 67899999987665432100 0011235799999988762 233322
Q ss_pred cC------CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecC
Q 008927 242 GS------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE 282 (548)
Q Consensus 242 ~~------~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~ 282 (548)
.. ..-....+||||++|+ ++...+ ...|.++|++.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~-v~n~~~-----~~~v~v~d~~~ 140 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIV-LQNASP-----ATSIGIVDVAK 140 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEE-EEEESS-----SEEEEEEETTT
T ss_pred CccccccCCCcceEEECCCCCEEE-EECCCC-----CCeEEEEECCC
Confidence 21 1233568999999876 542211 34688888774
No 107
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.56 E-value=1e-05 Score=82.55 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=132.6
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
.+..+.++| |+.++... .+|...||. ..+ .....+......+. ...|++++..|+... .++.|.
T Consensus 110 ~v~~~~~s~~~~~l~~~~----~dg~i~i~~--~~~-~~~~~~~~~~~~v~-------~~~~~~~~~~l~~~~-~d~~i~ 174 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGV----ENGELRLWN--KTG-ALLNVLNFHRAPIV-------SVKWNKDGTHIISMD-VENVTI 174 (425)
T ss_dssp CEEEEEECTTSSEEEEEE----TTSCEEEEE--TTS-CEEEEECCCCSCEE-------EEEECTTSSEEEEEE-TTCCEE
T ss_pred ceEEEEEcCCCCEEEEEe----CCCeEEEEe--CCC-CeeeeccCCCccEE-------EEEECCCCCEEEEEe-cCCeEE
Confidence 677889999 66555443 247777775 221 22333332211111 125666676666554 567788
Q ss_pred EEeCCCCCCCc-eecCCCCCC-----------CCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCc
Q 008927 169 KHSIDSKDSSP-LPITPDYGE-----------PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEP 236 (548)
Q Consensus 169 ~~~~~~~~~~~-~~lT~~~~~-----------~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~ 236 (548)
+.++.. ++. ..+...... .......+.|+|++. ++....+ ..|+++|+.+++. .
T Consensus 175 iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------g~i~~~d~~~~~~--~ 240 (425)
T 1r5m_A 175 LWNVIS--GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK---------GAIFVYQITEKTP--T 240 (425)
T ss_dssp EEETTT--TEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG---------GCEEEEETTCSSC--S
T ss_pred EEECCC--CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC---------CeEEEEEcCCCce--e
Confidence 888865 333 223222100 000155677888865 3333222 4689999998762 3
Q ss_pred EEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEE
Q 008927 237 KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 316 (548)
Q Consensus 237 ~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~ 316 (548)
..+......+....|+|||+.|+.... ...|++.++.. ++ ....+.... ..+..+.|+||| +++
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~-~~--~~~~~~~~~----~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTNKLLLSASD--------DGTLRIWHGGN-GN--SQNCFYGHS----QSIVSASWVGDD-KVI 304 (425)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEET--------TSCEEEECSSS-BS--CSEEECCCS----SCEEEEEEETTT-EEE
T ss_pred eeeccCCCceEEEEECCCCCEEEEEcC--------CCEEEEEECCC-Cc--cceEecCCC----ccEEEEEECCCC-EEE
Confidence 344433445677899999998875441 34688888874 43 233444333 457788999999 555
Q ss_pred EEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 317 VTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 317 ~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
.... +| .|+.+|+.+++........ ..+ .....+.| +++.| ++...++. |.++|+.+++
T Consensus 305 ~~~~-d~--~i~i~d~~~~~~~~~~~~~---~~~-----i~~~~~s~---~~~~l-~~~~~dg~--i~i~~~~~~~ 363 (425)
T 1r5m_A 305 SCSM-DG--SVRLWSLKQNTLLALSIVD---GVP-----IFAGRISQ---DGQKY-AVAFMDGQ--VNVYDLKKLN 363 (425)
T ss_dssp EEET-TS--EEEEEETTTTEEEEEEECT---TCC-----EEEEEECT---TSSEE-EEEETTSC--EEEEECHHHH
T ss_pred EEeC-CC--cEEEEECCCCcEeEecccC---Ccc-----EEEEEEcC---CCCEE-EEEECCCe--EEEEECCCCc
Confidence 5444 44 5777787777654333210 111 11234553 55544 44555554 5556665554
No 108
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.56 E-value=2.1e-05 Score=78.47 Aligned_cols=235 Identities=11% Similarity=-0.035 Sum_probs=136.5
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
..+++++|+.....++.|.++|+.+ ++. +.+... .....+.+++|| +| |+.... ...|+++|+
T Consensus 49 i~~~~~~lyv~~~~~~~v~viD~~t--~~~~~~i~~~-----~~p~~i~~~~~g-~l-yv~~~~-------~~~v~~iD~ 112 (328)
T 3dsm_A 49 MVIRDGIGWIVVNNSHVIFAIDINT--FKEVGRITGF-----TSPRYIHFLSDE-KA-YVTQIW-------DYRIFIINP 112 (328)
T ss_dssp EEEETTEEEEEEGGGTEEEEEETTT--CCEEEEEECC-----SSEEEEEEEETT-EE-EEEEBS-------CSEEEEEET
T ss_pred EEEECCEEEEEEcCCCEEEEEECcc--cEEEEEcCCC-----CCCcEEEEeCCC-eE-EEEECC-------CCeEEEEEC
Confidence 4567888888887778999999987 554 455432 123355688888 54 544321 247999999
Q ss_pred CCCCccCcE-EeeecCC-----ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccC
Q 008927 229 NGQNIQEPK-VLVSGSD-----FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 302 (548)
Q Consensus 229 ~~g~~~~~~-~L~~~~~-----~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~ 302 (548)
++++ .. .+..+.. .-....+ ++++|. +.... ....|+++|+++ +++. ..+... ..
T Consensus 113 ~t~~---~~~~i~~g~~~~~~~~p~~i~~--~~~~ly-v~~~~-----~~~~v~viD~~t-~~~~--~~i~~g-----~~ 173 (328)
T 3dsm_A 113 KTYE---ITGYIECPDMDMESGSTEQMVQ--YGKYVY-VNCWS-----YQNRILKIDTET-DKVV--DELTIG-----IQ 173 (328)
T ss_dssp TTTE---EEEEEECTTCCTTTCBCCCEEE--ETTEEE-EEECT-----TCCEEEEEETTT-TEEE--EEEECS-----SC
T ss_pred CCCe---EEEEEEcCCccccCCCcceEEE--ECCEEE-EEcCC-----CCCEEEEEECCC-CeEE--EEEEcC-----CC
Confidence 9987 43 3332220 2223345 567664 54110 145799999884 5432 223221 23
Q ss_pred CcCceECcCCcEEEEEeCCC-C------eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEE
Q 008927 303 PTEPKWSSKGELFFVTDRKN-G------FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSY 375 (548)
Q Consensus 303 ~~~~~wspDG~L~~~sd~~~-g------~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~ 375 (548)
.....++|||++|+.+.... + ...|+++|++++++........ -..| ..+.+.| +++.||+..
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p------~~la~~~---d~~~lyv~~ 243 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWP------SEVQLNG---TRDTLYWIN 243 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCC------EEEEECT---TSCEEEEES
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCc------eeEEEec---CCCEEEEEc
Confidence 45678899999777654310 0 2579999998887653321100 0011 2245553 677776542
Q ss_pred EeCCeEEEEEEECCCCceEeec-CC--CceeEee--eecCCEEEEEEe-cCCCCCeEEEEEcCCCc
Q 008927 376 RQNGRSYLGILDDFGHSLSLLD-IP--FTDIDNI--TLGNDCLFVEGA-SGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 376 ~~~g~~~L~~~dl~~g~~~~l~-~~--~~~~~~~--s~d~~~l~~~~s-s~~~p~~l~~~d~~~~~ 435 (548)
. .++++|++++++.... .+ .....++ +++++.+|+... +......|+++|++ ++
T Consensus 244 ---~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 244 ---N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ---S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred ---c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 2 7899999888753211 11 1223344 456777776641 11235789999987 54
No 109
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.56 E-value=6.4e-06 Score=83.60 Aligned_cols=201 Identities=11% Similarity=0.014 Sum_probs=110.9
Q ss_pred ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCce
Q 008927 195 DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAE 274 (548)
Q Consensus 195 ~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~ 274 (548)
..+|||||+.|+...... ...|.++|+.+++ ..........+....|||||++|+... ...
T Consensus 138 ~v~fSpDg~~la~as~~~-------d~~i~iwd~~~~~---~~~~~~~~~~V~~v~fspdg~~l~s~s---------~~~ 198 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKV-------PAIMRIIDPSDLT---EKFEIETRGEVKDLHFSTDGKVVAYIT---------GSS 198 (365)
T ss_dssp EEEECTTSSCEEEEESCS-------SCEEEEEETTTTE---EEEEEECSSCCCEEEECTTSSEEEEEC---------SSC
T ss_pred EEEEcCCCCEEEEEECCC-------CCEEEEeECCCCc---EEEEeCCCCceEEEEEccCCceEEecc---------cee
Confidence 467999999876643322 1468889999987 444334444566789999999998654 123
Q ss_pred EEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCccc
Q 008927 275 LWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWV 353 (548)
Q Consensus 275 L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~ 353 (548)
+.+.+... +... ........ . ..+....|+|||+ ++..+..+.....++.++...+....+.... -.+...
T Consensus 199 ~~~~~~~~-~~~~-~~~~~~~~-~--~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~-- 270 (365)
T 4h5i_A 199 LEVISTVT-GSCI-ARKTDFDK-N--WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ-VTNRFK-- 270 (365)
T ss_dssp EEEEETTT-CCEE-EEECCCCT-T--EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE-EESSCS--
T ss_pred EEEEEecc-Ccce-eeeecCCC-C--CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee-ecCCCC--
Confidence 56666653 4311 11111111 1 4567789999999 5555443233445667776555432211000 000111
Q ss_pred ccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eec-CCCceeEee--eecCCEEEEEEecCCCCCeEEEE
Q 008927 354 FGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLD-IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKV 429 (548)
Q Consensus 354 ~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~-~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~ 429 (548)
....+.++| +++.| ++...++. |.++|+++++.. .+. .....+..+ ++|++.|+ .++.. ..|.++
T Consensus 271 -~V~~~~~Sp---dg~~l-asgs~D~~--V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la-S~S~D---~tvrvw 339 (365)
T 4h5i_A 271 -GITSMDVDM---KGELA-VLASNDNS--IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA-SVSAA---NTIHII 339 (365)
T ss_dssp -CEEEEEECT---TSCEE-EEEETTSC--EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE-EEETT---SEEEEE
T ss_pred -CeEeEEECC---CCCce-EEEcCCCE--EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE-EEeCC---CeEEEE
Confidence 112355664 66555 45555554 666788888643 332 223345554 77877654 44432 456667
Q ss_pred EcCC
Q 008927 430 TLDD 433 (548)
Q Consensus 430 d~~~ 433 (548)
|+..
T Consensus 340 ~ip~ 343 (365)
T 4h5i_A 340 KLPL 343 (365)
T ss_dssp ECCT
T ss_pred EcCC
Confidence 7643
No 110
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=0.00017 Score=73.41 Aligned_cols=229 Identities=8% Similarity=-0.036 Sum_probs=117.9
Q ss_pred eEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCC-CCCCceeEEEEEECCCCCccCcEEeeec-
Q 008927 166 RLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-DALNSTTEIVAIALNGQNIQEPKVLVSG- 242 (548)
Q Consensus 166 ~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~-~~~~~~~~l~~idl~~g~~~~~~~L~~~- 242 (548)
.|+++|++. ++.. .|..+ .. ..+.+||||++|++..+.... ..++..+.|.++|+.+.+. ...+.-+
T Consensus 48 ~v~v~D~~t--~~~~~~i~~g-----~~-p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~--~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGS--GSILGHVNGG-----FL-PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP--IADIELPD 117 (373)
T ss_pred EEEEEECCC--CeEEEEecCC-----CC-CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE--EEEEECCC
Confidence 789999876 4433 33332 12 278899999997665321100 0001125688999988762 2222211
Q ss_pred -C-----CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE-EcCCCCCcccCCcCceECcCCc-E
Q 008927 243 -S-----DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-VAGFDPTIVESPTEPKWSSKGE-L 314 (548)
Q Consensus 243 -~-----~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~-l~~~~~~~~~~~~~~~wspDG~-L 314 (548)
. ..-....|||||++|+..... + ...|.++| + .+++ ... +.- . .+ ....|+|+ .
T Consensus 118 ~~~~~~g~~p~~~~~spDG~~l~v~n~~-~-----~~~v~viD-~-t~~~--~~~~i~~-~----~~---~~~~~~~~~~ 179 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNADLLFFQFA-A-----GPAVGLVV-Q-GGSS--DDQLLSS-P----TC---YHIHPGAPST 179 (373)
T ss_pred ccccccCCCccceEECCCCCEEEEEecC-C-----CCeEEEEE-C-CCCE--EeEEcCC-C----ce---EEEEeCCCce
Confidence 0 122356899999998754321 1 35799999 7 4553 222 221 1 11 34557776 5
Q ss_pred EEEEeCCCCeeeEEEEeccCCeeEeecccccc-c-CCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 315 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAE-F-SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 315 ~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d-~-~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
|+.... +| .+..++. +++.......... . ..|.+. . ..+.+ +++.+++... . ..++++|+.++.
T Consensus 180 ~~~~~~-dg--~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~--~--~~~~~---~~~~~~~~~~-~--~~v~vid~~~~~ 245 (373)
T 2mad_H 180 FYLLCA-QG--GLAKTDH-AGGAAGAGLVGAMLTAAQNLLT--Q--PAQAN---KSGRIVWPVY-S--GKILQADISAAG 245 (373)
T ss_pred EEEEcC-CC--CEEEEEC-CCcEEEEEeccccccCCcceee--c--ceeEe---cCCEEEEEcC-C--ceEEEEeccCCc
Confidence 444332 33 3556666 5554322110000 0 011100 0 11222 5566666552 2 378899987664
Q ss_pred eEeec---C-----------CCce-eEeeeecCCEEEEEEecCC------CCCeEEEEEcCCCce
Q 008927 393 LSLLD---I-----------PFTD-IDNITLGNDCLFVEGASGV------EPSSVAKVTLDDHKL 436 (548)
Q Consensus 393 ~~~l~---~-----------~~~~-~~~~s~d~~~l~~~~ss~~------~p~~l~~~d~~~~~~ 436 (548)
.+.+. . +.+. .-.+++|++++|+...... ...+|+++|+++++.
T Consensus 246 ~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v 310 (373)
T 2mad_H 246 ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT 310 (373)
T ss_pred ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE
Confidence 33221 0 1110 1224678888887664311 235899999987764
No 111
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.55 E-value=3.5e-06 Score=86.16 Aligned_cols=251 Identities=10% Similarity=0.031 Sum_probs=135.4
Q ss_pred eeEEECCEEEEEe----------CCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCC
Q 008927 149 AFRIFGDTVIFSN----------YKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDAL 217 (548)
Q Consensus 149 ~~~~~~~~i~F~~----------~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~ 217 (548)
+|+|++..++++. ..++.|++.++.. ++. +.+.... ....+..+.|+|||+.|+....+
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~--~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~d------ 88 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLA--ADSEKPIASLQ--VDSKFNDLDWSHNNKIIAGALDN------ 88 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSS--GGGCSCSCCCC--CSSCEEEEEECSSSSCEEEEESS------
T ss_pred eeCCCCCCEEEEEecCcccccccCCCCeEEEEEccC--CCCCcEEEEEe--cCCceEEEEECCCCCeEEEEccC------
Confidence 5777777566665 4567788888875 321 1221111 12346678899999988775443
Q ss_pred CceeEEEEEECCCCCc--cCcEEeeecCCceeeeEECCC-CCEEEEEEecCCCCCCCCceEEEEEecCCC------ceee
Q 008927 218 NSTTEIVAIALNGQNI--QEPKVLVSGSDFYAFPRMDPR-GERMAWIEWHHPNMPWDKAELWVGYISENG------DVYK 288 (548)
Q Consensus 218 ~~~~~l~~idl~~g~~--~~~~~L~~~~~~~~~p~~SPD-Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g------~~~~ 288 (548)
..|.++|+.+... .....+......+....|+|| ++.|+ .... ...|++.++.... ....
T Consensus 89 ---g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-s~~~-------dg~v~iwd~~~~~~~~~~~~~~~ 157 (416)
T 2pm9_A 89 ---GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLA-SGGN-------NGEIFIWDMNKCTESPSNYTPLT 157 (416)
T ss_dssp ---SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEE-EECS-------SSCEEBCBTTTTSSCTTTCCCBC
T ss_pred ---CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEE-EEcC-------CCeEEEEECCCCccccccccccc
Confidence 2477778876210 003334434445677899999 66665 4311 3468888887432 1000
Q ss_pred eEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeeccccccc-CCCcccccCcceeeeeecC
Q 008927 289 RVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEF-SRPLWVFGINSYEIIQSHG 366 (548)
Q Consensus 289 ~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~-~~p~w~~~~~~~~~~~~~~ 366 (548)
........ ..+..+.|+||+. +++.... +| .|..+|+.+++........... +.. .......|.|
T Consensus 158 ~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~--- 224 (416)
T 2pm9_A 158 PGQSMSSV----DEVISLAWNQSLAHVFASAGS-SN--FASIWDLKAKKEVIHLSYTSPNSGIK---QQLSVVEWHP--- 224 (416)
T ss_dssp CCCSCCSS----CCCCEEEECSSCTTEEEEESS-SS--CEEEEETTTTEEEEEECCCCCSSCCC---CCEEEEEECS---
T ss_pred cccccCCC----CCeeEEEeCCCCCcEEEEEcC-CC--CEEEEECCCCCcceEEeccccccccC---CceEEEEECC---
Confidence 00011111 4577899999954 7666554 44 4777787777654333211000 000 0112345654
Q ss_pred CCCEEEEEEEeCC-eEEEEEEECCCCc--eEeec-CCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 367 EKNLIACSYRQNG-RSYLGILDDFGHS--LSLLD-IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 367 d~~~l~~~~~~~g-~~~L~~~dl~~g~--~~~l~-~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
++..++++...++ ...|+++|+.++. ...+. .....+..+ +++++.++++++. ...|.++|+.+++.
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR---DNTVLLWNPESAEQ 297 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES---SSEEEEECSSSCCE
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC---CCCEEEeeCCCCcc
Confidence 5555555555543 2257777887753 22333 222334444 5523444444443 35788899877653
No 112
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.55 E-value=3.6e-05 Score=83.75 Aligned_cols=202 Identities=8% Similarity=-0.043 Sum_probs=113.8
Q ss_pred cCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEEE
Q 008927 91 LGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (548)
Q Consensus 91 ~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~ 169 (548)
...+.++| |+.+++-. .+...||..... ...+.+....-.+. .-+|+|+|..|+=.+ .++.|.+
T Consensus 21 ~~~~~~spdg~~l~~~~-----~~~v~l~~~~~~--~~~~~~~~h~~~v~-------~~~~spdg~~lasg~-~d~~v~l 85 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCN-----GTSVYTVPVGSL--TDTEIYTEHSHQTT-------VAKTSPSGYYCASGD-VHGNVRI 85 (611)
T ss_dssp CCCCEECTTSSEEEEEE-----TTEEEEEETTCS--SCCEEECCCSSCEE-------EEEECTTSSEEEEEE-TTSEEEE
T ss_pred eeEEeeCCCCCEEEeCC-----CCEEEEecCCCc--ccCeEecCCCCceE-------EEEECCCCcEEEEEe-CCCCEEE
Confidence 34567899 88888753 234455655322 23344443221221 126778887766544 4666666
Q ss_pred EeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceee
Q 008927 170 HSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAF 248 (548)
Q Consensus 170 ~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~ 248 (548)
-++..+.... ..+... ...+..+.|||||+.|+...++.. ....|+.+|. ++. ...+....+.+..
T Consensus 86 Wd~~~~~~~~~~~~~~~----~~~v~~v~fs~dg~~l~~~~~~~~-----~~~~v~~wd~--~~~--~~~l~gh~~~v~~ 152 (611)
T 1nr0_A 86 WDTTQTTHILKTTIPVF----SGPVKDISWDSESKRIAAVGEGRE-----RFGHVFLFDT--GTS--NGNLTGQARAMNS 152 (611)
T ss_dssp EESSSTTCCEEEEEECS----SSCEEEEEECTTSCEEEEEECCSS-----CSEEEEETTT--CCB--CBCCCCCSSCEEE
T ss_pred eECCCCcceeeEeeccc----CCceEEEEECCCCCEEEEEECCCC-----ceeEEEEeeC--CCC--cceecCCCCCceE
Confidence 6765310111 122222 234667889999999887754321 1246777774 331 3344444455777
Q ss_pred eEECCCCCE-EEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeE
Q 008927 249 PRMDPRGER-MAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNL 327 (548)
Q Consensus 249 p~~SPDGk~-La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~L 327 (548)
..|+||++. |+-.+ . ...+.+.+... ++ ....+.+.. ..+....|+|||++++.... ++ .|
T Consensus 153 v~f~p~~~~~l~s~s-~-------D~~v~lwd~~~-~~--~~~~l~~H~----~~V~~v~fspdg~~las~s~-D~--~i 214 (611)
T 1nr0_A 153 VDFKPSRPFRIISGS-D-------DNTVAIFEGPP-FK--FKSTFGEHT----KFVHSVRYNPDGSLFASTGG-DG--TI 214 (611)
T ss_dssp EEECSSSSCEEEEEE-T-------TSCEEEEETTT-BE--EEEEECCCS----SCEEEEEECTTSSEEEEEET-TS--CE
T ss_pred EEECCCCCeEEEEEe-C-------CCeEEEEECCC-Ce--Eeeeecccc----CceEEEEECCCCCEEEEEEC-CC--cE
Confidence 899999984 55333 1 23577777653 43 233444433 46788999999996555444 44 45
Q ss_pred EEEeccCCeeE
Q 008927 328 HKWIESNNEVL 338 (548)
Q Consensus 328 y~~d~~~g~~~ 338 (548)
.++++.+++..
T Consensus 215 ~lwd~~~g~~~ 225 (611)
T 1nr0_A 215 VLYNGVDGTKT 225 (611)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcEe
Confidence 56676666543
No 113
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.51 E-value=2.2e-05 Score=85.41 Aligned_cols=237 Identities=8% Similarity=0.024 Sum_probs=133.3
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+|+|+.|++.. ++.+++.++..+ ...+.++.. ...+....|||||+.|+....+ ..|.++|+
T Consensus 25 ~~spdg~~l~~~~--~~~v~l~~~~~~-~~~~~~~~h----~~~v~~~~~spdg~~lasg~~d---------~~v~lWd~ 88 (611)
T 1nr0_A 25 GNTPAGDKIQYCN--GTSVYTVPVGSL-TDTEIYTEH----SHQTTVAKTSPSGYYCASGDVH---------GNVRIWDT 88 (611)
T ss_dssp EECTTSSEEEEEE--TTEEEEEETTCS-SCCEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEES
T ss_pred eeCCCCCEEEeCC--CCEEEEecCCCc-ccCeEecCC----CCceEEEEECCCCcEEEEEeCC---------CCEEEeEC
Confidence 5788899999987 346777777641 344555543 2245667899999988765433 35777888
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+++......+....+.+....|||||++|+-...+.. ....+++.+. ++ ....+.+.. ..+....|
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~----~~~~v~~wd~---~~--~~~~l~gh~----~~v~~v~f 155 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE----RFGHVFLFDT---GT--SNGNLTGQA----RAMNSVDF 155 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS----CSEEEEETTT---CC--BCBCCCCCS----SCEEEEEE
T ss_pred CCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC----ceeEEEEeeC---CC--CcceecCCC----CCceEEEE
Confidence 76541001122223345677899999999986552211 0134555542 32 122234433 46778899
Q ss_pred CcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 309 SSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 309 spDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+||+. +++.... ++. +..++..+++....... ...++ ....|.| +++. +++...++. |.+.|
T Consensus 156 ~p~~~~~l~s~s~-D~~--v~lwd~~~~~~~~~l~~-----H~~~V---~~v~fsp---dg~~-las~s~D~~--i~lwd 218 (611)
T 1nr0_A 156 KPSRPFRIISGSD-DNT--VAIFEGPPFKFKSTFGE-----HTKFV---HSVRYNP---DGSL-FASTGGDGT--IVLYN 218 (611)
T ss_dssp CSSSSCEEEEEET-TSC--EEEEETTTBEEEEEECC-----CSSCE---EEEEECT---TSSE-EEEEETTSC--EEEEE
T ss_pred CCCCCeEEEEEeC-CCe--EEEEECCCCeEeeeecc-----ccCce---EEEEECC---CCCE-EEEEECCCc--EEEEE
Confidence 99998 5555444 454 44456656554332211 11122 2245654 5554 445555665 55567
Q ss_pred CCCCceE-eecC------C-CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 388 DFGHSLS-LLDI------P-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 388 l~~g~~~-~l~~------~-~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.+++.. .+.. . ...+..+ +++++.|+ .++. -..|.++|+.+++
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~---D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASA---DKTIKIWNVATLK 272 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEET---TSEEEEEETTTTE
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeC---CCeEEEEeCCCCc
Confidence 7777543 3321 1 2234444 67777654 3332 2567788887664
No 114
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.50 E-value=0.00012 Score=73.22 Aligned_cols=200 Identities=12% Similarity=0.009 Sum_probs=109.4
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCC--cccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP--SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~--~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
.+..+.++| |+.++--. .++...||..... .. +.....+ -...+. .-+|+|++..|+-.. .++.
T Consensus 18 ~v~~l~~sp~g~~las~~----~D~~i~iw~~~~~---~~~~~~~~~~~--h~~~v~---~~~~sp~g~~l~s~s-~D~~ 84 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG----GDRRIRIWGTEGD---SWICKSVLSEG--HQRTVR---KVAWSPCGNYLASAS-FDAT 84 (345)
T ss_dssp CEEEEEECTTSSCEEEEE----TTSCEEEEEEETT---EEEEEEEECSS--CSSCEE---EEEECTTSSEEEEEE-TTSC
T ss_pred cEEEEEECCCCCEEEEEc----CCCeEEEEEcCCC---cceeeeeeccc--cCCcEE---EEEECCCCCEEEEEE-CCCc
Confidence 345678888 77665443 2577777765332 11 1111110 001111 135777777666554 4454
Q ss_pred EEEEeCCCCCCCce---ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC-cEEeeec
Q 008927 167 LYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE-PKVLVSG 242 (548)
Q Consensus 167 Ly~~~~~~~~~~~~---~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~-~~~L~~~ 242 (548)
+.+.++.. +..+ .+... ...+..+.|+|||+.|+....+ ..|.++|+.++.... ...+...
T Consensus 85 v~iw~~~~--~~~~~~~~~~~h----~~~v~~v~~sp~~~~l~s~s~D---------~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 85 TCIWKKNQ--DDFECVTTLEGH----ENEVKSVAWAPSGNLLATCSRD---------KSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp EEEEEECC--C-EEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEEECTTSCEEEEEEECCC
T ss_pred EEEEEccC--CCeEEEEEccCC----CCCceEEEEeCCCCEEEEEECC---------CeEEEEECCCCCCeEEEEEecCc
Confidence 44444443 3322 23322 2346678899999988775443 247777877664100 1122233
Q ss_pred CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCC
Q 008927 243 SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 322 (548)
Q Consensus 243 ~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~ 322 (548)
...+....|+|||+.|+-... ...|.+.++.. +.......+.+.. ..+..+.|+|||++++.... +
T Consensus 150 ~~~v~~~~~~p~~~~l~s~s~--------d~~i~~w~~~~-~~~~~~~~~~~h~----~~v~~l~~sp~g~~l~s~s~-D 215 (345)
T 3fm0_A 150 TQDVKHVVWHPSQELLASASY--------DDTVKLYREEE-DDWVCCATLEGHE----STVWSLAFDPSGQRLASCSD-D 215 (345)
T ss_dssp CSCEEEEEECSSSSCEEEEET--------TSCEEEEEEET-TEEEEEEEECCCS----SCEEEEEECTTSSEEEEEET-T
T ss_pred CCCeEEEEECCCCCEEEEEeC--------CCcEEEEEecC-CCEEEEEEecCCC----CceEEEEECCCCCEEEEEeC-C
Confidence 344667889999998875542 23577777763 4321223344433 46788999999995555544 5
Q ss_pred CeeeEEEEe
Q 008927 323 GFWNLHKWI 331 (548)
Q Consensus 323 g~~~Ly~~d 331 (548)
+.-.||...
T Consensus 216 ~~v~iW~~~ 224 (345)
T 3fm0_A 216 RTVRIWRQY 224 (345)
T ss_dssp SCEEEEEEE
T ss_pred CeEEEeccc
Confidence 666666543
No 115
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.50 E-value=0.00012 Score=74.13 Aligned_cols=205 Identities=14% Similarity=0.035 Sum_probs=111.3
Q ss_pred eeEEE----C---CEEEEEeCCCCeEEEEeCCCCCCC------ceecCCCCCCC--CceecceeeC----CCCCE-EEEE
Q 008927 149 AFRIF----G---DTVIFSNYKDQRLYKHSIDSKDSS------PLPITPDYGEP--LVSYADGIFD----PRFNR-YVTV 208 (548)
Q Consensus 149 ~~~~~----~---~~i~F~~~~~~~Ly~~~~~~~~~~------~~~lT~~~~~~--~~~~~~~~~S----pDG~~-i~~v 208 (548)
.|+++ + ..|+. ...++.|++.++.. ++ .+.+..... . ...+..+.|+ |+++. |+..
T Consensus 69 ~~~~~~~~~g~~~~~l~s-~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~ 144 (397)
T 1sq9_A 69 DVLQAIERDAFELCLVAT-TSFSGDLLFYRITR--EDETKKVIFEKLDLLDS-DMKKHSFWALKWGASNDRLLSHRLVAT 144 (397)
T ss_dssp EEEEEEETTTEEEEEEEE-EETTSCEEEEEEEE--CTTTCCEEEEEECCSCT-TGGGSCEEEEEEECCC----CEEEEEE
T ss_pred EEecccccCCccccEEEE-EcCCCCEEEEEccC--Ccccccccceeeccccc-ccCCCcEEEEEEeeccCCCCceEEEEE
Confidence 67888 5 44444 44567777777765 33 344443210 0 1345677899 99998 6664
Q ss_pred EeccCCCCCCceeEEEEEECCC------CCccCcE-----Eeee-------cCCceeeeEECCCCCEEEEEEecCCCCCC
Q 008927 209 REDRRQDALNSTTEIVAIALNG------QNIQEPK-----VLVS-------GSDFYAFPRMDPRGERMAWIEWHHPNMPW 270 (548)
Q Consensus 209 ~~~~~~~~~~~~~~l~~idl~~------g~~~~~~-----~L~~-------~~~~~~~p~~SPDGk~La~~~~~~~~~p~ 270 (548)
..+ ..|.++|+.+ ++. .. .+.. .........|+||| .|+...
T Consensus 145 ~~d---------g~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-------- 204 (397)
T 1sq9_A 145 DVK---------GTTYIWKFHPFADESNSLT--LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF-------- 204 (397)
T ss_dssp ETT---------SCEEEEEEESSSSHHHHTT--TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC--------
T ss_pred eCC---------CcEEEEeCCccccccccce--eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe--------
Confidence 333 2477777776 431 22 4421 23345677899999 665332
Q ss_pred CCceEEEEEecCCCceeeeEEEcC---C---CCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccc
Q 008927 271 DKAELWVGYISENGDVYKRVCVAG---F---DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD 344 (548)
Q Consensus 271 ~~~~L~v~~~~~~g~~~~~~~l~~---~---~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~ 344 (548)
....|.+.++.. ++ ....+.. . . ..+..+.|+|||++++......+...|..+|+.+++........
T Consensus 205 ~dg~i~i~d~~~-~~--~~~~~~~~~~h~~~~----~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~ 277 (397)
T 1sq9_A 205 NNGTVQISELST-LR--PLYNFESQHSMINNS----NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP 277 (397)
T ss_dssp TTSEEEEEETTT-TE--EEEEEECCC---CCC----CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC
T ss_pred CCCcEEEEECCC-Cc--eeEEEeccccccccC----CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccC
Confidence 245799999874 43 2333333 2 2 45778899999995444433133457888888777643332210
Q ss_pred c--------ccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 345 A--------EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 345 ~--------d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
. .+.... ......|.| +++.|+ +...++ .|+++|+.+++.
T Consensus 278 ~~~~~~~~~~~~~~~---~v~~~~~~~---~~~~l~-~~~~dg--~i~iwd~~~~~~ 325 (397)
T 1sq9_A 278 THSSQASLGEFAHSS---WVMSLSFND---SGETLC-SAGWDG--KLRFWDVKTKER 325 (397)
T ss_dssp --------CCBSBSS---CEEEEEECS---SSSEEE-EEETTS--EEEEEETTTTEE
T ss_pred cccccccccccccCC---cEEEEEECC---CCCEEE-EEeCCC--eEEEEEcCCCce
Confidence 0 000011 112345654 555554 444455 566778877754
No 116
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.48 E-value=5e-05 Score=77.79 Aligned_cols=231 Identities=13% Similarity=0.059 Sum_probs=138.3
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
..|+|.+ ...|+++++++ ++.+.+.... .....+.|+++++.|+++ +.. ...|++++++++.
T Consensus 88 ~~l~~~~--~~~I~~i~~~~--~~~~~~~~~~----~~~~gl~~d~~~~~ly~~-D~~-------~~~I~r~~~~g~~-- 149 (386)
T 3v65_B 88 PVLLFAN--RIDIRQVLPHR--SEYTLLLNNL----ENAIALDFHHRRELVFWS-DVT-------LDRILRANLNGSN-- 149 (386)
T ss_dssp CEEEEEC--BSCEEEECTTS--CCCEEEECSC----SCEEEEEEETTTTEEEEE-ETT-------TTEEEEEETTSCC--
T ss_pred ceeEeec--CccceeeccCC--CcEEEEecCC----CccEEEEEecCCCeEEEE-eCC-------CCcEEEEecCCCC--
Confidence 3678876 45799999987 6666555431 235567899988887765 322 2579999999886
Q ss_pred CcEEee-ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 235 EPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 235 ~~~~L~-~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
.+.+. .+...-...++++.+..|+|... ....|+++++++ .. ...++.... .........|++.
T Consensus 150 -~~~~~~~~~~~p~glavd~~~g~lY~~d~-------~~~~I~~~~~dg--~~-~~~l~~~~l----~~P~giavdp~~g 214 (386)
T 3v65_B 150 -VEEVVSTGLESPGGLAVDWVHDKLYWTDS-------GTSRIEVANLDG--AH-RKVLLWQSL----EKPRAIALHPMEG 214 (386)
T ss_dssp -EEEEECSSCSCCCCEEEETTTTEEEEEET-------TTTEEEECBTTS--CS-CEEEECSSC----SCEEEEEEETTTT
T ss_pred -cEEEEeCCCCCccEEEEEeCCCeEEEEcC-------CCCeEEEEeCCC--Cc-eEEeecCCC----CCCcEEEEEcCCC
Confidence 55543 22222344577888888877652 235788888763 21 122333221 2344567788766
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
.+|.+|. .....|+++++++...+.+... .+ .|. ..+++.+ +++.||++- .+...|+++|++++..
T Consensus 215 ~ly~td~-~~~~~I~r~~~dG~~~~~~~~~--~~---~~P---nGlavd~---~~~~lY~aD--~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 215 TIYWTDW-GNTPRIEASSMDGSGRRIIADT--HL---FWP---NGLTIDY---AGRRMYWVD--AKHHVIERANLDGSHR 280 (386)
T ss_dssp EEEEEEC-SSSCEEEEEETTSCSCEEEECS--SC---SCE---EEEEEEG---GGTEEEEEE--TTTTEEEEECTTSCSC
T ss_pred eEEEecc-CCCCEEEEEeCCCCCcEEEEEC--CC---CCe---eeEEEeC---CCCEEEEEE--CCCCEEEEEeCCCCee
Confidence 4445555 2336799999876555544321 11 121 1245543 678888763 3455799999876655
Q ss_pred Eeec-CCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 394 SLLD-IPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 394 ~~l~-~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.+. .....-.+++.+++.+|++-. ....|.+++..+++
T Consensus 281 ~~~~~~~~~~P~giav~~~~ly~td~---~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 281 KAVISQGLPHPFAITVFEDSLYWTDW---HTKSINSANKFTGK 320 (386)
T ss_dssp EEEECSSCSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEEECCCCCceEEEEECCEEEEeeC---CCCeEEEEECCCCc
Confidence 5443 222233344556777776542 34678888854554
No 117
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.48 E-value=3.9e-05 Score=77.64 Aligned_cols=240 Identities=12% Similarity=0.107 Sum_probs=130.9
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|++++..++++...++.|.+.++.+ ++...+..... ....+..+.|+| +++.|+....+ ..|.++|
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d---------~~i~iwd 147 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDV--QNKTSFIQGMG-PGDAITGMKFNQFNTNQLFVSSIR---------GATTLRD 147 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTS--TTCEEEECCCS-TTCBEEEEEEETTEEEEEEEEETT---------TEEEEEE
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCC--cccceeeecCC-cCCceeEEEeCCCCCCEEEEEeCC---------CEEEEEE
Confidence 45566633444444577788888876 44433322100 123566788999 55655554322 3688889
Q ss_pred CCCCCccCcEEeeecC---CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 228 LNGQNIQEPKVLVSGS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~---~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
+.++. .+.+.... ..+....|+|||+.|+... ....|++.++. ++ ....+.... ..+.
T Consensus 148 ~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~i~d~~--~~--~~~~~~~h~----~~v~ 208 (383)
T 3ei3_B 148 FSGSV---IQVFAKTDSWDYWYCCVDVSVSRQMLATGD--------STGRLLLLGLD--GH--EIFKEKLHK----AKVT 208 (383)
T ss_dssp TTSCE---EEEEECCCCSSCCEEEEEEETTTTEEEEEE--------TTSEEEEEETT--SC--EEEEEECSS----SCEE
T ss_pred CCCCc---eEEEeccCCCCCCeEEEEECCCCCEEEEEC--------CCCCEEEEECC--CC--EEEEeccCC----CcEE
Confidence 98765 55554332 3466778999999887544 13579999985 32 233444433 4578
Q ss_pred CceECcCCc-EEEEEeCCCCeeeEEEEeccC----CeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 305 EPKWSSKGE-LFFVTDRKNGFWNLHKWIESN----NEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 305 ~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~----g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
...|+|+++ +++.... ++ .|..+|+.+ ++....... ..+ .....|. +.++.++++...++
T Consensus 209 ~~~~~~~~~~~l~s~~~-d~--~i~iwd~~~~~~~~~~~~~~~~----~~~-----v~~~~~s---~~~~~~l~~~~~d~ 273 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSV-DA--TVKLWDLRNIKDKNSYIAEMPH----EKP-----VNAAYFN---PTDSTKLLTTDQRN 273 (383)
T ss_dssp EEEECSSCTTEEEEEET-TS--EEEEEEGGGCCSTTCEEEEEEC----SSC-----EEEEEEC---TTTSCEEEEEESSS
T ss_pred EEEECCCCCCEEEEEeC-CC--EEEEEeCCCCCcccceEEEecC----CCc-----eEEEEEc---CCCCCEEEEEcCCC
Confidence 899999999 7777655 55 456666655 222222211 111 1123444 11334444554454
Q ss_pred eEEEEEEECCCCce-EeecCC----C---ceeE-eeeecCCEEEEEEe-----cCCCCCeEEEEEcCCCce
Q 008927 380 RSYLGILDDFGHSL-SLLDIP----F---TDID-NITLGNDCLFVEGA-----SGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 380 ~~~L~~~dl~~g~~-~~l~~~----~---~~~~-~~s~d~~~l~~~~s-----s~~~p~~l~~~d~~~~~~ 436 (548)
.|.++|+.+++. ..+... . ..+. .+.+++..+.+..+ +......|+++|+.+++.
T Consensus 274 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 274 --EIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp --EEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCE
T ss_pred --cEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCce
Confidence 466778776643 222210 0 0111 11334444433322 112456788999877763
No 118
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.48 E-value=9.9e-05 Score=74.42 Aligned_cols=231 Identities=13% Similarity=0.043 Sum_probs=138.0
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
..|+|.+ ...|+++++++ .+.+.+.... .+...+.|+++++.|+++ +.. ...|++++++++.
T Consensus 45 ~~ll~~~--~~~I~~i~~~g--~~~~~~~~~~----~~~~~l~~d~~~~~ly~~-D~~-------~~~I~r~~~~g~~-- 106 (349)
T 3v64_C 45 PVLLFAN--RIDIRQVLPHR--SEYTLLLNNL----ENAIALDFHHRRELVFWS-DVT-------LDRILRANLNGSN-- 106 (349)
T ss_dssp CEEEEEC--BSCEEEECTTS--CCEEEEECSC----SCEEEEEEETTTTEEEEE-ETT-------TTEEEEEETTSCS--
T ss_pred ceeEeec--ccceEEEeCCC--CeeEEeecCC----CceEEEEEeccccEEEEE-ecc-------CCceEEEecCCCC--
Confidence 3688886 45699999987 5555554431 234567899988887765 321 2479999999887
Q ss_pred CcEEee-ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 235 EPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 235 ~~~~L~-~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
.+.+. .+...-...++++.+..|+|... ....|+++++++ .. ...++.... ......+.+|++.
T Consensus 107 -~~~~~~~~~~~p~glavd~~~g~ly~~d~-------~~~~I~~~~~dG--~~-~~~l~~~~l----~~P~~iavdp~~g 171 (349)
T 3v64_C 107 -VEEVVSTGLESPGGLAVDWVHDKLYWTDS-------GTSRIEVANLDG--AH-RKVLLWQSL----EKPRAIALHPMEG 171 (349)
T ss_dssp -CEEEECSSCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETTS--CS-CEEEECTTC----SCEEEEEEETTTT
T ss_pred -ceEEEeCCCCCccEEEEecCCCeEEEEcC-------CCCeEEEEcCCC--Cc-eEEEEeCCC----CCcceEEEecCcC
Confidence 55553 23223345678888888887652 245799999863 21 122333221 2345567888766
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
.+|.+|. .....|+++++++...+.+... .+..| ..+++.+ +++.||++- .+...|+++|++++..
T Consensus 172 ~ly~td~-~~~~~I~r~~~dG~~~~~~~~~--~~~~P------nGla~d~---~~~~lY~aD--~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 172 TIYWTDW-GNTPRIEASSMDGSGRRIIADT--HLFWP------NGLTIDY---AGRRMYWVD--AKHHVIERANLDGSHR 237 (349)
T ss_dssp EEEEEEC-SSSCEEEEEETTSCSCEESCCS--SCSCE------EEEEEET---TTTEEEEEE--TTTTEEEEEETTSCSC
T ss_pred eEEEecc-CCCCEEEEEeCCCCCcEEEEEC--CCCCc------ceEEEeC---CCCEEEEEE--CCCCEEEEEeCCCCce
Confidence 4445554 2236799999876555544321 11112 1244543 678888763 3445799999876655
Q ss_pred Eeec-CCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 394 SLLD-IPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 394 ~~l~-~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.+. .....-.+++.+++.+|++-. ....|.+++..+|+
T Consensus 238 ~~~~~~~~~~P~giav~~~~ly~td~---~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 238 KAVISQGLPHPFAITVFEDSLYWTDW---HTKSINSANKFTGK 277 (349)
T ss_dssp EEEECSSCSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEEeCCCCCceEEEEECCEEEEecC---CCCeEEEEEccCCC
Confidence 4433 232223344456777766532 34678888854454
No 119
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.48 E-value=3.1e-05 Score=83.31 Aligned_cols=238 Identities=8% Similarity=0.055 Sum_probs=136.1
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCC----Cc-eecCCCCCCCCce-ecceeeCC--CCCEEEEEEeccCCCCCCce
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDS----SP-LPITPDYGEPLVS-YADGIFDP--RFNRYVTVREDRRQDALNST 220 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~----~~-~~lT~~~~~~~~~-~~~~~~Sp--DG~~i~~v~~~~~~~~~~~~ 220 (548)
+|+++++.|++.. ++.|.+.+++. + +. +.+... ... +..+.|+| ||+.|+....+
T Consensus 25 ~~spdg~~l~~~~--~~~v~v~~~~~--~~~~~~~~~~~~~h----~~~~v~~~~~sp~~~~~~l~s~~~d--------- 87 (615)
T 1pgu_A 25 SYDPTTNAIAYPC--GKSAFVRCLDD--GDSKVPPVVQFTGH----GSSVVTTVKFSPIKGSQYLCSGDES--------- 87 (615)
T ss_dssp EEETTTTEEEEEE--TTEEEEEECCS--SCCSSCSEEEECTT----TTSCEEEEEECSSTTCCEEEEEETT---------
T ss_pred EECCCCCEEEEec--CCeEEEEECCC--CCCccccceEEecC----CCceEEEEEECcCCCCCEEEEecCC---------
Confidence 7888999999988 56788888875 4 33 344433 234 67788999 99987765433
Q ss_pred eEEEEEECCCC------CccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC
Q 008927 221 TEIVAIALNGQ------NIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG 294 (548)
Q Consensus 221 ~~l~~idl~~g------~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~ 294 (548)
..|.++|+.++ +......+......+....|||||++|+....+.. ....|++.+ . ++ ....+.+
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~----~~~~v~~~d--~-~~--~~~~~~~ 158 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD----NFGVFISWD--S-GN--SLGEVSG 158 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS----CSEEEEETT--T-CC--EEEECCS
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC----CccEEEEEE--C-CC--cceeeec
Confidence 35777777654 20002223323445677899999999986653221 124566555 2 32 2333444
Q ss_pred CCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCC-CCEEE
Q 008927 295 FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGE-KNLIA 372 (548)
Q Consensus 295 ~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d-~~~l~ 372 (548)
.. ..+....|+|||+ +++.... ++ .|..+|+.+++...........+.+ .....+.| + ++.|
T Consensus 159 ~~----~~v~~~~~~~~~~~~l~~~~~-d~--~v~vwd~~~~~~~~~~~~~~~~~~~-----v~~~~~~~---~~~~~l- 222 (615)
T 1pgu_A 159 HS----QRINACHLKQSRPMRSMTVGD-DG--SVVFYQGPPFKFSASDRTHHKQGSF-----VRDVEFSP---DSGEFV- 222 (615)
T ss_dssp CS----SCEEEEEECSSSSCEEEEEET-TT--EEEEEETTTBEEEEEECSSSCTTCC-----EEEEEECS---TTCCEE-
T ss_pred CC----ccEEEEEECCCCCcEEEEEeC-CC--cEEEEeCCCcceeeeecccCCCCce-----EEEEEECC---CCCCEE-
Confidence 33 4577899999998 6666555 45 4566677676654332211100001 12245654 5 5544
Q ss_pred EEEEeCCeEEEEEEECCCCceE-ee-c---CCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 373 CSYRQNGRSYLGILDDFGHSLS-LL-D---IPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 373 ~~~~~~g~~~L~~~dl~~g~~~-~l-~---~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
++...++ .|+++|+.+++.. .+ . .....+..+ + +++.++ +++. ...|.++|+.+++
T Consensus 223 ~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~-~~~~---d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 223 ITVGSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFA-TVGA---DATIRVWDVTTSK 285 (615)
T ss_dssp EEEETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEE-EEET---TSEEEEEETTTTE
T ss_pred EEEeCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEE-EEcC---CCcEEEEECCCCc
Confidence 4444444 4677788887654 44 2 222334444 4 555554 3332 2568888887665
No 120
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.46 E-value=0.00013 Score=74.48 Aligned_cols=149 Identities=13% Similarity=0.082 Sum_probs=92.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|++++..|+... .++.|.+.++.. ++.. .+... ...+..+.|+|||+.|+....+ ..|.++|
T Consensus 130 ~~s~dg~~l~s~~-~d~~i~iwd~~~--~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~d---------~~v~iwd 193 (393)
T 1erj_A 130 CFSPDGKFLATGA-EDRLIRIWDIEN--RKIVMILQGH----EQDIYSLDYFPSGDKLVSGSGD---------RTVRIWD 193 (393)
T ss_dssp EECTTSSEEEEEE-TTSCEEEEETTT--TEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEEEEE
T ss_pred EECCCCCEEEEEc-CCCeEEEEECCC--CcEEEEEccC----CCCEEEEEEcCCCCEEEEecCC---------CcEEEEE
Confidence 5666777666543 567788888876 4443 33332 2345678899999988765433 3688889
Q ss_pred CCCCCccCcEEeeecCCceeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE-------cCCCCCc
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-------AGFDPTI 299 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l-------~~~~~~~ 299 (548)
+.+++ ........+......|+| ||+.|+-... ...|.+.|+.. +.. ...+ .+..
T Consensus 194 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~s~--------d~~v~iwd~~~-~~~--~~~~~~~~~~~~~h~--- 256 (393)
T 1erj_A 194 LRTGQ---CSLTLSIEDGVTTVAVSPGDGKYIAAGSL--------DRAVRVWDSET-GFL--VERLDSENESGTGHK--- 256 (393)
T ss_dssp TTTTE---EEEEEECSSCEEEEEECSTTCCEEEEEET--------TSCEEEEETTT-CCE--EEEEC------CCCS---
T ss_pred CCCCe---eEEEEEcCCCcEEEEEECCCCCEEEEEcC--------CCcEEEEECCC-CcE--EEeecccccCCCCCC---
Confidence 99886 444444444566778999 8998875442 24578888874 432 1222 1211
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccC
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN 334 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~ 334 (548)
..+....|+|||++++.... ++. |.++|+.+
T Consensus 257 -~~v~~v~~~~~g~~l~s~s~-d~~--v~~wd~~~ 287 (393)
T 1erj_A 257 -DSVYSVVFTRDGQSVVSGSL-DRS--VKLWNLQN 287 (393)
T ss_dssp -SCEEEEEECTTSSEEEEEET-TSE--EEEEEC--
T ss_pred -CCEEEEEECCCCCEEEEEeC-CCE--EEEEECCC
Confidence 45677899999995555544 454 44455543
No 121
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.46 E-value=6.2e-05 Score=73.92 Aligned_cols=238 Identities=11% Similarity=0.037 Sum_probs=132.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+|++..|+-. ..++.|.+.++..+ ...+.+... ........|+||++.|+....+ ..|.++|+
T Consensus 20 ~fsp~~~~l~s~-~~dg~v~lWd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~s~s~d---------~~i~vwd~ 84 (304)
T 2ynn_A 20 DFHPTEPWVLTT-LYSGRVELWNYETQ-VEVRSIQVT----ETPVRAGKFIARKNWIIVGSDD---------FRIRVFNY 84 (304)
T ss_dssp EECSSSSEEEEE-ETTSEEEEEETTTT-EEEEEEECC----SSCEEEEEEEGGGTEEEEEETT---------SEEEEEET
T ss_pred EECCCCCEEEEE-cCCCcEEEEECCCC-ceeEEeecc----CCcEEEEEEeCCCCEEEEECCC---------CEEEEEEC
Confidence 567777666544 35677777787651 223344332 1234566799999987765433 36888899
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+++. ...+....+.+....|+||++.|+-.+. ...|.+.|+..+.. ....+.+.. ..+....|
T Consensus 85 ~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~sgs~--------D~~v~lWd~~~~~~--~~~~~~~h~----~~v~~v~~ 148 (304)
T 2ynn_A 85 NTGEK--VVDFEAHPDYIRSIAVHPTKPYVLSGSD--------DLTVKLWNWENNWA--LEQTFEGHE----HFVMCVAF 148 (304)
T ss_dssp TTCCE--EEEEECCSSCEEEEEECSSSSEEEEEET--------TSCEEEEEGGGTTE--EEEEECCCC----SCEEEEEE
T ss_pred CCCcE--EEEEeCCCCcEEEEEEcCCCCEEEEECC--------CCeEEEEECCCCcc--hhhhhcccC----CcEEEEEE
Confidence 98871 2334444556777899999998874332 34588888874222 123344433 45778899
Q ss_pred CcC-CcEEEEEeCCCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 309 SSK-GELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 309 spD-G~L~~~sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
+|+ +.+++.... ++ .|..+|+..++.. .+.... ... .....+.+ . .++.++++...++. |.+.
T Consensus 149 ~p~~~~~l~sgs~-D~--~v~iwd~~~~~~~~~~~~~~---~~~-----v~~~~~~~-~-~~~~~l~s~s~D~~--i~iW 213 (304)
T 2ynn_A 149 NPKDPSTFASGCL-DR--TVKVWSLGQSTPNFTLTTGQ---ERG-----VNYVDYYP-L-PDKPYMITASDDLT--IKIW 213 (304)
T ss_dssp CTTCTTEEEEEET-TS--EEEEEETTCSSCSEEEECCC---TTC-----EEEEEECC-S-TTCCEEEEEETTSE--EEEE
T ss_pred CCCCCCEEEEEeC-CC--eEEEEECCCCCccceeccCC---cCc-----EEEEEEEE-c-CCCCEEEEEcCCCe--EEEE
Confidence 994 566666544 45 4555666544322 221110 000 01112221 0 23344556655664 5566
Q ss_pred ECCCCce-EeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 387 DDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 387 dl~~g~~-~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
|+.+++. ..+......+..+ ++++..| +.++. -..|.++|+.+++.
T Consensus 214 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~---Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPII-ISGSE---DGTLKIWNSSTYKV 262 (304)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSSEE-EEEET---TSCEEEEETTTCCE
T ss_pred eCCCCccceeeCCCCCCEEEEEECCCCCEE-EEEcC---CCeEEEEECCCCce
Confidence 8877753 3444333334433 5666644 34433 25688888877664
No 122
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.43 E-value=0.00013 Score=78.56 Aligned_cols=245 Identities=9% Similarity=0.024 Sum_probs=134.9
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCC--CCCCC-ceecCCCCCCCCceecceeeC----CCCCEEEEEEeccCCCCCCce
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSID--SKDSS-PLPITPDYGEPLVSYADGIFD----PRFNRYVTVREDRRQDALNST 220 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~--~~~~~-~~~lT~~~~~~~~~~~~~~~S----pDG~~i~~v~~~~~~~~~~~~ 220 (548)
..+++||++||..+ +++.|+++|+. . .+ ...|..+ ..-..+.+| |||++++...+..
T Consensus 202 v~~SpDGr~lyv~~-~dg~V~viD~~~~t--~~~v~~i~~G-----~~P~~ia~s~~~~pDGk~l~v~n~~~-------- 265 (567)
T 1qks_A 202 SRLSASGRYLFVIG-RDGKVNMIDLWMKE--PTTVAEIKIG-----SEARSIETSKMEGWEDKYAIAGAYWP-------- 265 (567)
T ss_dssp EEECTTSCEEEEEE-TTSEEEEEETTSSS--CCEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEET--------
T ss_pred eEECCCCCEEEEEc-CCCeEEEEECCCCC--CcEeEEEecC-----CCCceeEEccccCCCCCEEEEEEccC--------
Confidence 46777888777655 57799999995 3 22 2344332 123356799 7999976654432
Q ss_pred eEEEEEECCCCCccCcEEeee-cC---------C-ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeee
Q 008927 221 TEIVAIALNGQNIQEPKVLVS-GS---------D-FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKR 289 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~-~~---------~-~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~ 289 (548)
+.+.++|..+.+. .+.+.- +. . .......|+++..++ +... +..+|+++|......+ ..
T Consensus 266 ~~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v-v~~~------~~g~v~~vd~~~~~~~-~v 335 (567)
T 1qks_A 266 PQYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI-VNVK------ETGKILLVDYTDLNNL-KT 335 (567)
T ss_dssp TEEEEEETTTCCE--EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE-EEET------TTTEEEEEETTCSSEE-EE
T ss_pred CeEEEEECCCCcE--EEEEeccccccccccccCCCceEEEEEcCCCCEEE-EEec------CCCeEEEEecCCCccc-ee
Confidence 4788999888762 222221 10 1 233456788877554 3321 2568999998742211 12
Q ss_pred EEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCc-ceeeeeecCCC
Q 008927 290 VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGIN-SYEIIQSHGEK 368 (548)
Q Consensus 290 ~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~-~~~~~~~~~d~ 368 (548)
..+... .......|+|||+.+|+++..+ ..|..+|.+++++....+.... .| .++.. .| +.| ++
T Consensus 336 ~~i~~~-----~~~~d~~~~pdgr~~~va~~~s--n~V~ViD~~t~kl~~~i~vgg~--~P--hpg~g~~~-~~p---~~ 400 (567)
T 1qks_A 336 TEISAE-----RFLHDGGLDGSHRYFITAANAR--NKLVVIDTKEGKLVAIEDTGGQ--TP--HPGRGANF-VHP---TF 400 (567)
T ss_dssp EEEECC-----SSEEEEEECTTSCEEEEEEGGG--TEEEEEETTTTEEEEEEECSSS--SB--CCTTCEEE-EET---TT
T ss_pred eeeecc-----ccccCceECCCCCEEEEEeCCC--CeEEEEECCCCcEEEEEeccCc--CC--CCccceee-ECC---CC
Confidence 222221 2344568999999666665423 3688899999886554432001 11 11111 11 222 45
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCc--------eEeecCC-Cce-eEeeeecCCEEEEEEe-cCC--CCCeEEEEEcCCC
Q 008927 369 NLIACSYRQNGRSYLGILDDFGHS--------LSLLDIP-FTD-IDNITLGNDCLFVEGA-SGV--EPSSVAKVTLDDH 434 (548)
Q Consensus 369 ~~l~~~~~~~g~~~L~~~dl~~g~--------~~~l~~~-~~~-~~~~s~d~~~l~~~~s-s~~--~p~~l~~~d~~~~ 434 (548)
+.++++ ..-+...|.++|.++++ ++.+... .+. +-..+++++++|+... .++ ....|.++|..+.
T Consensus 401 g~v~~t-~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 401 GPVWAT-SHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEEE-EBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CcEEEe-CCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 666543 33344568888877632 2344432 111 1123678888776432 111 1348999998655
No 123
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.42 E-value=4.1e-06 Score=98.82 Aligned_cols=280 Identities=12% Similarity=0.041 Sum_probs=153.1
Q ss_pred ccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEE
Q 008927 90 RLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLY 168 (548)
Q Consensus 90 ~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly 168 (548)
.+..+.++| |+.++.-. ++|...+|..... .....+......+. .-.|++++..|+.. ..++.|.
T Consensus 963 ~i~~~~~sp~g~~l~~g~----~~g~i~i~d~~~~--~~~~~~~~h~~~v~-------~l~~s~dg~~l~s~-~~dg~i~ 1028 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGD----EDGAIKIIELPNN--RVFSSGVGHKKAVR-------HIQFTADGKTLISS-SEDSVIQ 1028 (1249)
T ss_dssp CEEEEEECTTSSEEEEEE----TTSCCEEEETTTT--SCEEECCCCSSCCC-------CEEECSSSSCEEEE-CSSSBEE
T ss_pred cEEEEEEcCCCCEEEEEc----CCCCEEEEEcCCC--ceeeecccCCCceE-------EEEECCCCCEEEEE-cCCCEEE
Confidence 455677888 66555443 2577777766432 12222222211111 23577777766554 4577888
Q ss_pred EEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceee
Q 008927 169 KHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAF 248 (548)
Q Consensus 169 ~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~ 248 (548)
+.++.. ++...+... ......+.|+|++.. +....+ ..|.++|+.+++. .+.+......+..
T Consensus 1029 vwd~~~--~~~~~~~~~----~~~v~~~~~~~~~~l-~~~~~d---------g~v~vwd~~~~~~--~~~~~~~~~~v~~ 1090 (1249)
T 3sfz_A 1029 VWNWQT--GDYVFLQAH----QETVKDFRLLQDSRL-LSWSFD---------GTVKVWNVITGRI--ERDFTCHQGTVLS 1090 (1249)
T ss_dssp EEETTT--TEEECCBCC----SSCEEEEEECSSSEE-EEEESS---------SEEEEEETTTTCC--CEEEECCSSCCCC
T ss_pred EEECCC--CceEEEecC----CCcEEEEEEcCCCcE-EEEECC---------CcEEEEECCCCce--eEEEcccCCcEEE
Confidence 888876 554444432 234667789998754 343332 3689999998872 3445444445677
Q ss_pred eEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEE
Q 008927 249 PRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLH 328 (548)
Q Consensus 249 p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly 328 (548)
..|||||+.|+.... ...|.+.++.. ++ ....+.+.. ..+..+.|+|||++++.... +|. |.
T Consensus 1091 ~~~s~d~~~l~s~s~--------d~~v~iwd~~~-~~--~~~~l~~h~----~~v~~~~~s~dg~~lat~~~-dg~--i~ 1152 (1249)
T 3sfz_A 1091 CAISSDATKFSSTSA--------DKTAKIWSFDL-LS--PLHELKGHN----GCVRCSAFSLDGILLATGDD-NGE--IR 1152 (1249)
T ss_dssp EEECSSSSSCEEECC--------SSCCCEECSSS-SS--CSBCCCCCS----SCEEEEEECSSSSEEEEEET-TSC--CC
T ss_pred EEECCCCCEEEEEcC--------CCcEEEEECCC-cc--eeeeeccCC----CcEEEEEECCCCCEEEEEeC-CCE--EE
Confidence 899999998875442 23577778774 43 122333332 45678899999995555544 454 55
Q ss_pred EEeccCCeeEeec-ccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCceeEee
Q 008927 329 KWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI 406 (548)
Q Consensus 329 ~~d~~~g~~~~l~-~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~~~~ 406 (548)
.+|+.+++..... +..................|+| +++.|+.. +| .|.++|+.+|+.. .+......+..+
T Consensus 1153 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~---dg~~l~s~---~g--~v~vwd~~~g~~~~~~~~~~~~i~~~ 1224 (1249)
T 3sfz_A 1153 IWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSP---DSKTLVSA---GG--YLKWWNVATGDSSQTFYTNGTNLKKI 1224 (1249)
T ss_dssp EEESSSSCCCCCCCCCC-------CCSCCCEEEECT---TSSCEEEE---SS--SEEEBCSSSCBCCCCCCCSSCCCCCC
T ss_pred EEECCCCceEEEeccccccccccccCceEEEEEECC---CCCEEEEC---CC--eEEEEECCCCceeeeeeccCCcccEE
Confidence 6677676643221 1100000000111123356664 66666533 23 5777888887643 222222223333
Q ss_pred --eecCCEEEEEEecCCCCCeEEEEEc
Q 008927 407 --TLGNDCLFVEGASGVEPSSVAKVTL 431 (548)
Q Consensus 407 --s~d~~~l~~~~ss~~~p~~l~~~d~ 431 (548)
+++++.++.... .+.++++++
T Consensus 1225 ~~s~dg~~l~~~~~----dg~v~vw~l 1247 (1249)
T 3sfz_A 1225 HVSPDFRTYVTVDN----LGILYILQV 1247 (1249)
T ss_dssp EECSSSCCEEEECT----TCCEEEECC
T ss_pred EECCCCCEEEEecC----CcEEEEEee
Confidence 677776654332 245666553
No 124
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.41 E-value=7.3e-05 Score=74.90 Aligned_cols=199 Identities=12% Similarity=0.090 Sum_probs=106.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc--e-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP--L-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~--~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|+|++..|+-.. .++.|.+.++.+ +.. + .+... ....+..+.|+|||+.|+....+. .+.+
T Consensus 23 ~~sp~g~~las~~-~D~~i~iw~~~~--~~~~~~~~~~~~---h~~~v~~~~~sp~g~~l~s~s~D~---------~v~i 87 (345)
T 3fm0_A 23 AWNPAGTLLASCG-GDRRIRIWGTEG--DSWICKSVLSEG---HQRTVRKVAWSPCGNYLASASFDA---------TTCI 87 (345)
T ss_dssp EECTTSSCEEEEE-TTSCEEEEEEET--TEEEEEEEECSS---CSSCEEEEEECTTSSEEEEEETTS---------CEEE
T ss_pred EECCCCCEEEEEc-CCCeEEEEEcCC--Ccceeeeeeccc---cCCcEEEEEECCCCCEEEEEECCC---------cEEE
Confidence 5667777666544 455555555554 321 1 12221 123466788999999887754432 3555
Q ss_pred EECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
+++.++.......+....+.+....|+|||+.|+-.+. ...|.+.++...........+.+.. ..+..
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~--------D~~v~iwd~~~~~~~~~~~~~~~h~----~~v~~ 155 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR--------DKSVWVWEVDEEDEYECVSVLNSHT----QDVKH 155 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET--------TSCEEEEEECTTSCEEEEEEECCCC----SCEEE
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC--------CCeEEEEECCCCCCeEEEEEecCcC----CCeEE
Confidence 56666540001223333445677899999999885542 2458888887433221223344333 45678
Q ss_pred ceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 306 ~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
..|+|||++++.... ++.-.|| +..+++...+..... ...+ .....|.| +++.| ++...++.-+||.
T Consensus 156 ~~~~p~~~~l~s~s~-d~~i~~w--~~~~~~~~~~~~~~~-h~~~-----v~~l~~sp---~g~~l-~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 156 VVWHPSQELLASASY-DDTVKLY--REEEDDWVCCATLEG-HEST-----VWSLAFDP---SGQRL-ASCSDDRTVRIWR 222 (345)
T ss_dssp EEECSSSSCEEEEET-TSCEEEE--EEETTEEEEEEEECC-CSSC-----EEEEEECT---TSSEE-EEEETTSCEEEEE
T ss_pred EEECCCCCEEEEEeC-CCcEEEE--EecCCCEEEEEEecC-CCCc-----eEEEEECC---CCCEE-EEEeCCCeEEEec
Confidence 899999995455444 4544444 444554332211100 0111 12245654 55554 4566677777776
Q ss_pred EE
Q 008927 386 LD 387 (548)
Q Consensus 386 ~d 387 (548)
..
T Consensus 223 ~~ 224 (345)
T 3fm0_A 223 QY 224 (345)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 125
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.41 E-value=0.00016 Score=72.27 Aligned_cols=264 Identities=12% Similarity=0.062 Sum_probs=138.6
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| |+.++ ... .+|...||..... .....+...... + -.-+|++++..|+-.. .++.+
T Consensus 56 ~~v~~~~~s~d~~~l~-s~s---~Dg~v~iWd~~~~--~~~~~~~~~~~~----v---~~~~~s~~~~~l~s~~-~d~~v 121 (340)
T 1got_B 56 AKIYAMHWGTDSRLLL-SAS---QDGKLIIWDSYTT--NKVHAIPLRSSW----V---MTCAYAPSGNYVACGG-LDNIC 121 (340)
T ss_dssp SCEEEEEECTTSSEEE-EEE---TTTEEEEEETTTC--CEEEEEECSSSC----E---EEEEECTTSSEEEEEE-TTCEE
T ss_pred CceEEEEECCCCCEEE-EEe---CCCcEEEEECCCC--CcceEeecCCcc----E---EEEEECCCCCEEEEEe-CCCeE
Confidence 4566788888 55443 322 2577777765332 112222211111 1 0125666676665543 46677
Q ss_pred EEEeCCCCCCCce---ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcE-EeeecC
Q 008927 168 YKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPK-VLVSGS 243 (548)
Q Consensus 168 y~~~~~~~~~~~~---~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~-~L~~~~ 243 (548)
.+.++...++..+ .+... ........|++++. |+....+ ..|.++|+.+++ .. .+....
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~-l~s~s~d---------~~i~~wd~~~~~---~~~~~~~h~ 184 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGH----TGYLSCCRFLDDNQ-IVTSSGD---------TTCALWDIETGQ---QTTTFTGHT 184 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECC----SSCEEEEEEEETTE-EEEEETT---------SCEEEEETTTTE---EEEEECCCS
T ss_pred EEEECccCCCcceeEEEecCC----CccEEEEEECCCCc-EEEEECC---------CcEEEEECCCCc---EEEEEcCCC
Confidence 7777764211122 22222 12344567888875 4443322 358888998886 33 333334
Q ss_pred CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCC
Q 008927 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (548)
Q Consensus 244 ~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g 323 (548)
+.+....|+|||+.|+-... ...|.+.|+.. +. ....+.+.. ..+....|+|||++++.... +|
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~--------d~~v~~wd~~~-~~--~~~~~~~h~----~~v~~v~~~p~~~~l~s~s~-d~ 248 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGAC--------DASAKLWDVRE-GM--CRQTFTGHE----SDINAICFFPNGNAFATGSD-DA 248 (340)
T ss_dssp SCEEEEEECTTSSEEEEEET--------TSCEEEEETTT-CS--EEEEECCCS----SCEEEEEECTTSSEEEEEET-TS
T ss_pred CceEEEEECCCCCEEEEEeC--------CCcEEEEECCC-Ce--eEEEEcCCc----CCEEEEEEcCCCCEEEEEcC-CC
Confidence 45667889999997764331 34688889874 43 233444433 45778899999995555444 44
Q ss_pred eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCce
Q 008927 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTD 402 (548)
Q Consensus 324 ~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~ 402 (548)
.|..+|+.+++........ ....+.....|.| +++.| ++...++. |.++|..+++.. .+......
T Consensus 249 --~v~iwd~~~~~~~~~~~~~------~~~~~v~~~~~s~---~g~~l-~~g~~d~~--i~vwd~~~~~~~~~~~~h~~~ 314 (340)
T 1got_B 249 --TCRLFDLRADQELMTYSHD------NIICGITSVSFSK---SGRLL-LAGYDDFN--CNVWDALKADRAGVLAGHDNR 314 (340)
T ss_dssp --CEEEEETTTTEEEEEECCT------TCCSCEEEEEECT---TSSEE-EEEETTSE--EEEEETTTCCEEEEEECCSSC
T ss_pred --cEEEEECCCCcEEEEEccC------CcccceEEEEECC---CCCEE-EEECCCCe--EEEEEcccCcEeeEeecCCCc
Confidence 4556677666543222111 0011122345654 55544 45555554 566687666543 33332333
Q ss_pred eEee--eecCCEE
Q 008927 403 IDNI--TLGNDCL 413 (548)
Q Consensus 403 ~~~~--s~d~~~l 413 (548)
+..+ ++++..|
T Consensus 315 v~~~~~s~dg~~l 327 (340)
T 1got_B 315 VSCLGVTDDGMAV 327 (340)
T ss_dssp EEEEEECTTSSCE
T ss_pred EEEEEEcCCCCEE
Confidence 4444 4555544
No 126
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.41 E-value=0.00019 Score=71.16 Aligned_cols=230 Identities=10% Similarity=0.039 Sum_probs=132.3
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCC----C
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNG----Q 231 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~----g 231 (548)
.|+|.+ ...|.++++++ .+...+.+.. .+...+.|+++++.|+++ ... ...|+++++++ .
T Consensus 3 ~ll~~~--~~~I~~i~~~~--~~~~~~~~~~----~~p~g~~~d~~~~~ly~~-D~~-------~~~I~~~~~~g~~~~~ 66 (316)
T 1ijq_A 3 YLFFTN--RHEVRKMTLDR--SEYTSLIPNL----RNVVALDTEVASNRIYWS-DLS-------QRMICSTQLDRAHGVS 66 (316)
T ss_dssp EEEEEC--BSSEEEEETTS--CCCEEEECSC----SSEEEEEEETTTTEEEEE-ETT-------TTEEEEEEC-------
T ss_pred EEEEEC--CCeEEEEECCC--cceEehhcCC----CceEEEEEEeCCCEEEEE-ECC-------CCcEEEEECCCCCCCc
Confidence 478887 45699999987 5555554321 234567899988887765 321 25799999987 3
Q ss_pred CccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc
Q 008927 232 NIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 232 ~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp 310 (548)
. .+.+.. +...-...++++.++.|+|... ....|.++++++ .. ...++.... .........|
T Consensus 67 ~---~~~~~~~~~~~p~glavd~~~~~ly~~d~-------~~~~I~~~~~~g-~~--~~~~~~~~~----~~P~~iavdp 129 (316)
T 1ijq_A 67 S---YDTVISRDIQAPDGLAVDWIHSNIYWTDS-------VLGTVSVADTKG-VK--RKTLFRENG----SKPRAIVVDP 129 (316)
T ss_dssp ----CEEEECSSCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETTS-SS--EEEEEECTT----CCEEEEEEET
T ss_pred c---cEEEEeCCCCCcCEEEEeecCCeEEEEEC-------CCCEEEEEeCCC-Cc--eEEEEECCC----CCcceEEeCC
Confidence 3 344332 2222345577777888876642 245799998863 22 122333221 2344567788
Q ss_pred CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCC
Q 008927 311 KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (548)
Q Consensus 311 DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~ 390 (548)
++..+|.+|. .....|+++++++...+.+... .+. |. ...++.+ +++.||++- .+...|+++|+++
T Consensus 130 ~~g~ly~~d~-~~~~~I~~~~~dG~~~~~~~~~--~~~---~P---~gla~d~---~~~~lY~~D--~~~~~I~~~d~dg 195 (316)
T 1ijq_A 130 VHGFMYWTDW-GTPAKIKKGGLNGVDIYSLVTE--NIQ---WP---NGITLDL---LSGRLYWVD--SKLHSISSIDVNG 195 (316)
T ss_dssp TTTEEEEEEC-SSSCEEEEEETTSCCEEEEECS--SCS---CE---EEEEEET---TTTEEEEEE--TTTTEEEEEETTS
T ss_pred CCCEEEEEcc-CCCCeEEEEcCCCCCeEEEEEC--CCC---Cc---eEEEEec---cCCEEEEEE--CCCCeEEEEecCC
Confidence 6664444554 2235799999865544444321 111 21 1244543 678888753 3455789999987
Q ss_pred CceEeecC-C--CceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 391 HSLSLLDI-P--FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 391 g~~~~l~~-~--~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
...+.+.. . ...-.+++.+++.+|++-. ....|++++..+++
T Consensus 196 ~~~~~~~~~~~~~~~P~giav~~~~ly~~d~---~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 240 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred CceEEEeecCCccCCcEEEEEECCEEEEEEC---CCCeEEEEeCCCCc
Confidence 65555432 1 2223344556777776542 34688999875554
No 127
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.40 E-value=2.8e-05 Score=79.57 Aligned_cols=242 Identities=12% Similarity=0.055 Sum_probs=129.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCC-----C-ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDS-----S-PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTE 222 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~-----~-~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~ 222 (548)
.|+++++.++++...++.|.+.++..++. + ...+... ...+..+.|+|+|+.++++.... ..
T Consensus 88 ~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~~d--------g~ 155 (402)
T 2aq5_A 88 AWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----TKRVGIVAWHPTAQNVLLSAGCD--------NV 155 (402)
T ss_dssp EECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----SSCEEEEEECSSBTTEEEEEETT--------SC
T ss_pred EeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----CCeEEEEEECcCCCCEEEEEcCC--------CE
Confidence 56662334445555677777777765200 1 1233322 23466788999995444443321 35
Q ss_pred EEEEECCCCCccCcEEe--eecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE-cCCCCCc
Q 008927 223 IVAIALNGQNIQEPKVL--VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV-AGFDPTI 299 (548)
Q Consensus 223 l~~idl~~g~~~~~~~L--~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l-~~~~~~~ 299 (548)
|.++|+.+++. ...+ ....+.+....|+|||+.|+.... ...|.+.|+.. ++ ....+ .... .
T Consensus 156 i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~-~~--~~~~~~~~~~-~- 220 (402)
T 2aq5_A 156 ILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICTSCR--------DKRVRVIEPRK-GT--VVAEKDRPHE-G- 220 (402)
T ss_dssp EEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEEEET--------TSEEEEEETTT-TE--EEEEEECSSC-S-
T ss_pred EEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEEEec--------CCcEEEEeCCC-Cc--eeeeeccCCC-C-
Confidence 88889998861 2333 223445677899999998885542 35799999984 43 22333 2322 1
Q ss_pred ccCCcCceECcCCcEEEEE-eCCCCeeeEEEEeccCCee-EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEe
Q 008927 300 VESPTEPKWSSKGELFFVT-DRKNGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ 377 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~s-d~~~g~~~Ly~~d~~~g~~-~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~ 377 (548)
..+....|+|||++++.. +. .....|..+|+.+++. ..+... +... +.....+.| +++.|+++...
T Consensus 221 -~~~~~~~~~~~~~~l~~g~~~-~~d~~i~iwd~~~~~~~~~~~~~--~~~~-----~v~~~~~s~---~~~~l~~~g~~ 288 (402)
T 2aq5_A 221 -TRPVHAVFVSEGKILTTGFSR-MSERQVALWDTKHLEEPLSLQEL--DTSS-----GVLLPFFDP---DTNIVYLCGKG 288 (402)
T ss_dssp -SSCCEEEECSTTEEEEEEECT-TCCEEEEEEETTBCSSCSEEEEC--CCCS-----SCEEEEEET---TTTEEEEEETT
T ss_pred -CcceEEEEcCCCcEEEEeccC-CCCceEEEEcCccccCCceEEec--cCCC-----ceeEEEEcC---CCCEEEEEEcC
Confidence 236778999999955554 22 3335788888766543 111110 0011 112244554 67777655534
Q ss_pred CCeEEEEEEECCCCc--eEeecC-C-CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCcee
Q 008927 378 NGRSYLGILDDFGHS--LSLLDI-P-FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHKLK 437 (548)
Q Consensus 378 ~g~~~L~~~dl~~g~--~~~l~~-~-~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~~ 437 (548)
++ .|.++|+.+++ ...+.. . ...+..+ ++++..++ +. ...+.++++.+++.+
T Consensus 289 dg--~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~---s~---~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 289 DS--SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV---NK---CEIARFYKLHERKCE 346 (402)
T ss_dssp CS--CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG---GG---TEEEEEEEEETTEEE
T ss_pred CC--eEEEEEecCCCcceEeecccccCCcccceEEecccccce---ec---ceeEEEEEcCCCcEE
Confidence 55 45556666665 444432 1 1223333 45554332 11 124555666566544
No 128
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.40 E-value=0.00016 Score=74.46 Aligned_cols=233 Identities=10% Similarity=0.020 Sum_probs=135.1
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc-c
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-Q 234 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~-~ 234 (548)
.|+|.+ ...|.++++++ .+.+.+.... .....+.|++.++.|+++ +.. ...|+++++++... .
T Consensus 85 ~ll~~~--~~~I~~i~l~~--~~~~~~~~~~----~~~~~l~~d~~~~~lyws-D~~-------~~~I~~~~~~g~~~~~ 148 (400)
T 3p5b_L 85 YLFFTN--RHEVRKMTLDR--SEYTSLIPNL----RNVVALDTEVASNRIYWS-DLS-------QRMICSTQLDRAHGVS 148 (400)
T ss_dssp EEEEEE--TTEEEEECTTS--CSCEEEECSC----SCEEEEEEETTTTEEEEE-ETT-------TTEEEEEEC------C
T ss_pred eeEEec--cceeEEEccCC--cceeEecccc----CcceEEeeeeccCceEEE-ecC-------CCeEEEEEcccCCCCC
Confidence 688887 56799999987 5566554431 234567899988887765 321 24799999987210 0
Q ss_pred CcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 235 EPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 235 ~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
....+.. +...-...++.+.++.|+|... ....|.++++++ .. ...++.... .....++..|.+.
T Consensus 149 ~~~~~~~~~~~~p~glavD~~~~~lY~~d~-------~~~~I~~~~~~g-~~--~~~l~~~~~----~~P~~iavdp~~g 214 (400)
T 3p5b_L 149 SYDTVISRDIQAPDGLAVDWIHSNIYWTDS-------VLGTVSVADTKG-VK--RKTLFRENG----SKPRAIVVDPVHG 214 (400)
T ss_dssp CCEEEECSSCSCEEEEEEETTTTEEEEEET-------TTTEEEEECTTT-CS--EEEEEECSS----CCEEEEEEETTTT
T ss_pred cceEEEeCCCCCcccEEEEecCCceEEEEC-------CCCeEEEEeCCC-Cc--eEEEEeCCC----CCcceEEEecccC
Confidence 0334432 3333445577777888877652 245789888863 22 122333221 2344567788666
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
.+|.+|. .....|+++++++...+.+... .+ .|.. .+++.+ +++.||++- .+...|+++|++++..
T Consensus 215 ~ly~td~-~~~~~I~~~~~dG~~~~~~~~~--~l---~~P~---glavd~---~~~~lY~aD--~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 215 FMYWTDW-GTPAKIKKGGLNGVDIYSLVTE--NI---QWPN---GITLDL---LSGRLYWVD--SKLHSISSIDVNGGNR 280 (400)
T ss_dssp EEEEEEC-SSSCCEEEEETTSCSCEEEECS--SC---SCEE---EEEEET---TTTEEEEEE--TTTTEEEEEETTSCCC
T ss_pred eEEEEeC-CCCCEEEEEeCCCCccEEEEEC--CC---CceE---EEEEEe---CCCEEEEEE--CCCCEEEEEeCCCCcc
Confidence 4445554 2235799999876655555421 11 2211 244543 678888763 3456799999987766
Q ss_pred EeecCC---CceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 394 SLLDIP---FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 394 ~~l~~~---~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.+... ...-.+++.+++.+|++-. ....|++++..+|+
T Consensus 281 ~~~~~~~~~l~~P~gl~v~~~~lywtd~---~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 281 KTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 322 (400)
T ss_dssp EEEEECSSTTSSEEEEEEETTEEEEEES---SSCSEEEEESSSCC
T ss_pred EEEEeCCCCCCCCEEEEEeCCEEEEecC---CCCeEEEEEcCCCC
Confidence 555321 2222345667787777652 34578888865554
No 129
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.38 E-value=1.1e-05 Score=82.46 Aligned_cols=253 Identities=8% Similarity=0.107 Sum_probs=135.8
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCC--CCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGD--EPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ 165 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~--~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~ 165 (548)
..+..+.++| |+.++.-. ++|...||.......+ ....+......+. .-.|+++++.++++...++
T Consensus 68 ~~v~~~~~s~~~~~l~~~~----~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-------~~~~~~~~~~~l~s~~~dg 136 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGAL----DNGSLELYSTNEANNAINSMARFSNHSSSVK-------TVKFNAKQDNVLASGGNNG 136 (416)
T ss_dssp SCEEEEEECSSSSCEEEEE----SSSCEEEECCSSTTSCCCEEEECCCSSSCCC-------EEEECSSSTTBEEEECSSS
T ss_pred CceEEEEECCCCCeEEEEc----cCCeEEEeecccccccccchhhccCCccceE-------EEEEcCCCCCEEEEEcCCC
Confidence 4577889999 76665543 2577777766441101 1122222211111 1256666555666666778
Q ss_pred eEEEEeCCCCCCC-------ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE
Q 008927 166 RLYKHSIDSKDSS-------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (548)
Q Consensus 166 ~Ly~~~~~~~~~~-------~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~ 238 (548)
.|++.++.. ++ +..+.... ........+.|+|++..++++.... ..|.++|+.+++ ...
T Consensus 137 ~v~iwd~~~--~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~---~~~ 202 (416)
T 2pm9_A 137 EIFIWDMNK--CTESPSNYTPLTPGQSM-SSVDEVISLAWNQSLAHVFASAGSS--------NFASIWDLKAKK---EVI 202 (416)
T ss_dssp CEEBCBTTT--TSSCTTTCCCBCCCCSC-CSSCCCCEEEECSSCTTEEEEESSS--------SCEEEEETTTTE---EEE
T ss_pred eEEEEECCC--Ccccccccccccccccc-CCCCCeeEEEeCCCCCcEEEEEcCC--------CCEEEEECCCCC---cce
Confidence 898889876 32 22221111 0123456788999954444433221 358889999876 333
Q ss_pred eeec-------CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEc-CCCCCcccCCcCceECc
Q 008927 239 LVSG-------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA-GFDPTIVESPTEPKWSS 310 (548)
Q Consensus 239 L~~~-------~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~-~~~~~~~~~~~~~~wsp 310 (548)
.... ........|+|||+.++.+..... ....|++.|+..... ....+. +.. ..+..+.|+|
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~~~i~~~d~~~~~~--~~~~~~~~~~----~~v~~~~~s~ 272 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD----NDPSILIWDLRNANT--PLQTLNQGHQ----KGILSLDWCH 272 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS----SSCCCCEEETTSTTS--CSBCCCSCCS----SCEEEEEECS
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCC----CCceEEEEeCCCCCC--CcEEeecCcc----CceeEEEeCC
Confidence 2222 344677899999864443442211 012688889875322 122333 322 4577889999
Q ss_pred -CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC
Q 008927 311 -KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 389 (548)
Q Consensus 311 -DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~ 389 (548)
|+++++.... +| .|.++|+.+++........ ..+ .....|.| ++..++++...++. |.++|+.
T Consensus 273 ~~~~~l~s~~~-dg--~v~~wd~~~~~~~~~~~~~-----~~~---v~~~~~s~---~~~~~l~s~~~d~~--i~iw~~~ 336 (416)
T 2pm9_A 273 QDEHLLLSSGR-DN--TVLLWNPESAEQLSQFPAR-----GNW---CFKTKFAP---EAPDLFACASFDNK--IEVQTLQ 336 (416)
T ss_dssp SCSSCEEEEES-SS--EEEEECSSSCCEEEEEECS-----SSC---CCCEEECT---TCTTEEEECCSSSE--EEEEESC
T ss_pred CCCCeEEEEeC-CC--CEEEeeCCCCccceeecCC-----CCc---eEEEEECC---CCCCEEEEEecCCc--EEEEEcc
Confidence 7885555444 44 4777787777643322210 111 12245654 55355555555554 5555665
Q ss_pred CCc
Q 008927 390 GHS 392 (548)
Q Consensus 390 ~g~ 392 (548)
+++
T Consensus 337 ~~~ 339 (416)
T 2pm9_A 337 NLT 339 (416)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 130
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.37 E-value=0.00017 Score=74.21 Aligned_cols=240 Identities=11% Similarity=0.043 Sum_probs=131.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|+|++.. +++...++.|.+.++.. ++. +.+... ...+....|+|+|+.|+....+ ..|.++|
T Consensus 115 ~~~p~~~~-l~s~s~Dg~i~vwd~~~--~~~~~~l~~h----~~~V~~v~~~~~~~~l~sgs~D---------~~i~iwd 178 (410)
T 1vyh_C 115 IFHPVFSV-MVSASEDATIKVWDYET--GDFERTLKGH----TDSVQDISFDHSGKLLASCSAD---------MTIKLWD 178 (410)
T ss_dssp EECSSSSE-EEEEESSSCEEEEETTT--CCCCEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCCCEEE
T ss_pred EEcCCCCE-EEEEeCCCeEEEEECCC--CcEEEEEecc----CCcEEEEEEcCCCCEEEEEeCC---------CeEEEEe
Confidence 45555554 44444677888888876 443 444433 2245677899999977665433 2466778
Q ss_pred CCCCCccCcEE-eeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCc
Q 008927 228 LNGQNIQEPKV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 228 l~~g~~~~~~~-L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 306 (548)
+.+++ ... +......+....|+|||+.|+-.+. ...|.+.|+.. +. ....+.+.. ..+...
T Consensus 179 ~~~~~---~~~~~~~h~~~V~~v~~~p~~~~l~s~s~--------D~~i~~wd~~~-~~--~~~~~~~h~----~~v~~~ 240 (410)
T 1vyh_C 179 FQGFE---CIRTMHGHDHNVSSVSIMPNGDHIVSASR--------DKTIKMWEVQT-GY--CVKTFTGHR----EWVRMV 240 (410)
T ss_dssp TTSSC---EEECCCCCSSCEEEEEECSSSSEEEEEET--------TSEEEEEETTT-CC--EEEEEECCS----SCEEEE
T ss_pred CCCCc---eeEEEcCCCCCEEEEEEeCCCCEEEEEeC--------CCeEEEEECCC-Cc--EEEEEeCCC----ccEEEE
Confidence 88876 332 3333445677899999998874442 35688889874 43 233444433 456778
Q ss_pred eECcCCcEEEEEeCCCCeeeEEEEeccCCeeEe-ecccccccCCCcccccCcc-----------eeeeeecCCCCEEEEE
Q 008927 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLA-IYSLDAEFSRPLWVFGINS-----------YEIIQSHGEKNLIACS 374 (548)
Q Consensus 307 ~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~-l~~~~~d~~~p~w~~~~~~-----------~~~~~~~~d~~~l~~~ 374 (548)
.|+|||++++.... ++. |..+|+.+++... +......+....|...... .... ..+.++++
T Consensus 241 ~~~~~g~~l~s~s~-D~~--v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~l~s 313 (410)
T 1vyh_C 241 RPNQDGTLIASCSN-DQT--VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG----KPGPFLLS 313 (410)
T ss_dssp EECTTSSEEEEEET-TSC--EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----------CCEEEE
T ss_pred EECCCCCEEEEEcC-CCe--EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC----CCCCEEEE
Confidence 89999996666544 443 5555666665432 2111100000011110000 0000 11334455
Q ss_pred EEeCCeEEEEEEECCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 375 YRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 375 ~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
...++. |.++|+.+++.. .+......+..+ +++++.|+ .++. -..|.++|+.+++
T Consensus 314 gs~D~~--i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~---D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 314 GSRDKT--IKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCAD---DKTLRVWDYKNKR 371 (410)
T ss_dssp EETTSE--EEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE-EEET---TTEEEEECCTTSC
T ss_pred EeCCCe--EEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE-EEeC---CCeEEEEECCCCc
Confidence 555554 666788877543 333333334444 56666554 4432 2578888876654
No 131
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.37 E-value=5.1e-05 Score=75.92 Aligned_cols=233 Identities=11% Similarity=0.017 Sum_probs=126.3
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCC---ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSS---PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~---~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|++++..|+.. ..++.|++.++++ ++ ...+... ...+..+.|+|||+.|+....+ ..|.+
T Consensus 15 ~~s~~~~~l~~~-~~d~~v~i~~~~~--~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~d---------g~i~v 78 (372)
T 1k8k_C 15 AWNKDRTQIAIC-PNNHEVHIYEKSG--NKWVQVHELKEH----NGQVTGVDWAPDSNRIVTCGTD---------RNAYV 78 (372)
T ss_dssp EECTTSSEEEEE-CSSSEEEEEEEET--TEEEEEEEEECC----SSCEEEEEEETTTTEEEEEETT---------SCEEE
T ss_pred EECCCCCEEEEE-eCCCEEEEEeCCC--CcEEeeeeecCC----CCcccEEEEeCCCCEEEEEcCC---------CeEEE
Confidence 466666666665 3467788888876 43 3344332 2346678899999988775433 24777
Q ss_pred EECCCCCccCcEEe---eecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccC
Q 008927 226 IALNGQNIQEPKVL---VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVES 302 (548)
Q Consensus 226 idl~~g~~~~~~~L---~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~ 302 (548)
+|+.+++ .... ...........|+|||+.|+.... ...|.+.+++..........+.... . ..
T Consensus 79 wd~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~v~i~d~~~~~~~~~~~~~~~~~-~--~~ 144 (372)
T 1k8k_C 79 WTLKGRT---WKPTLVILRINRAARCVRWAPNEKKFAVGSG--------SRVISICYFEQENDWWVCKHIKKPI-R--ST 144 (372)
T ss_dssp EEEETTE---EEEEEECCCCSSCEEEEEECTTSSEEEEEET--------TSSEEEEEEETTTTEEEEEEECTTC-C--SC
T ss_pred EECCCCe---eeeeEEeecCCCceeEEEECCCCCEEEEEeC--------CCEEEEEEecCCCcceeeeeeeccc-C--CC
Confidence 7877765 2222 223344667899999998886552 2457777777433211122222211 1 45
Q ss_pred CcCceECcCCcEEEEEeCCCCeeeEEEEecc------------------CCeeEeecccccccCCCcccccCcceeeeee
Q 008927 303 PTEPKWSSKGELFFVTDRKNGFWNLHKWIES------------------NNEVLAIYSLDAEFSRPLWVFGINSYEIIQS 364 (548)
Q Consensus 303 ~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~------------------~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~ 364 (548)
+....|+|||++++.... +|. |+.+|+. .++....... ... ......+.|
T Consensus 145 i~~~~~~~~~~~l~~~~~-dg~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~v~~~~~~~- 212 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSC-DFK--CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-----SCG---WVHGVCFSA- 212 (372)
T ss_dssp EEEEEECTTSSEEEEEET-TSC--EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-----CSS---CEEEEEECS-
T ss_pred eeEEEEcCCCCEEEEEcC-CCC--EEEEEcccccccccccccccccccchhhheEecCC-----CCC---eEEEEEECC-
Confidence 778899999995555544 454 4445532 2222211110 001 112244553
Q ss_pred cCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCC
Q 008927 365 HGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 433 (548)
Q Consensus 365 ~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~ 433 (548)
+++.|+ +...++. |.++|+.+++.. .+......+..+ ++++. +++.+ . . ..|+++++.+
T Consensus 213 --~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~-d--~~i~i~~~~~ 274 (372)
T 1k8k_C 213 --NGSRVA-WVSHDST--VCLADADKKMAVATLASETLPLLAVTFITESS-LVAAG-H-D--CFPVLFTYDS 274 (372)
T ss_dssp --SSSEEE-EEETTTE--EEEEEGGGTTEEEEEECSSCCEEEEEEEETTE-EEEEE-T-T--SSCEEEEEET
T ss_pred --CCCEEE-EEeCCCE--EEEEECCCCceeEEEccCCCCeEEEEEecCCC-EEEEE-e-C--CeEEEEEccC
Confidence 555554 4445554 666787776543 444333334444 45554 44444 2 2 4455666555
No 132
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=98.37 E-value=3.5e-07 Score=94.34 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=57.6
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc------------CccC----hHHHHHHhc
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR------------GILN----LSIQYWTSR 523 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~------------~~~~----~~~Q~~asr 523 (548)
..|.++|++. ||.+++++||.|.+ . .+++|+||++||+...... ..|. ...++|+++
T Consensus 91 ~~e~v~~~~~-~g~~l~~~l~~P~~--~----~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~ 163 (398)
T 3nuz_A 91 RLEKWEFYPL-PKCVSTFLVLIPDN--I----NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKE 163 (398)
T ss_dssp EEEEEEECCS-TTBCEEEEEEEESS--C----CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTT
T ss_pred EEEEEEEEcC-CCcEEEEEEEeCCC--C----CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHC
Confidence 3577899998 99999999999964 1 3578999999998765431 1222 577899999
Q ss_pred CcEEEEeCCCCCCCCC
Q 008927 524 GWAFVDVNYGGSTGLS 539 (548)
Q Consensus 524 GyaVl~~NyRGStGyG 539 (548)
||+|+.+|+||....+
T Consensus 164 Gy~Vl~~D~rG~G~s~ 179 (398)
T 3nuz_A 164 GYIAVAVDNPAAGEAS 179 (398)
T ss_dssp TCEEEEECCTTSGGGC
T ss_pred CCEEEEecCCCCCccc
Confidence 9999999999976654
No 133
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=98.37 E-value=3.2e-07 Score=100.72 Aligned_cols=77 Identities=18% Similarity=0.214 Sum_probs=57.1
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccC--------hHH-HHHHhcCcEEEEe
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILN--------LSI-QYWTSRGWAFVDV 530 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~--------~~~-Q~~asrGyaVl~~ 530 (548)
.|.+++++. ||.+|++++|.|++ .+++|+||.+||--.. .....+. ... |+|+++||+|+.+
T Consensus 37 ~~~v~i~~~-DG~~L~~~l~~P~~-------~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~ 108 (652)
T 2b9v_A 37 KREVMVPMR-DGVKLYTVIVIPKN-------ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 108 (652)
T ss_dssp EEEEEEECT-TSCEEEEEEEEETT-------CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred EEEEEEECC-CCcEEEEEEEecCC-------CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEE
Confidence 477899998 99999999999964 2578999999852111 0001111 123 9999999999999
Q ss_pred CCCCCCCCChhhhhc
Q 008927 531 NYGGSTGLSSVPSTS 545 (548)
Q Consensus 531 NyRGStGyG~~f~~a 545 (548)
|+||+.++|..|...
T Consensus 109 D~RG~g~S~g~~~~~ 123 (652)
T 2b9v_A 109 DIRGKYGSQGDYVMT 123 (652)
T ss_dssp ECTTSTTCCSCCCTT
T ss_pred ecCcCCCCCCccccc
Confidence 999999998877543
No 134
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.36 E-value=0.00013 Score=72.48 Aligned_cols=210 Identities=10% Similarity=0.040 Sum_probs=115.5
Q ss_pred CccCceEEcC-C--CcEEEEEecCCCCCceEEEEcCCCCCC-CCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC
Q 008927 89 KRLGGTAVDG-H--GRLIWLESRPTEAGRGVLVKEPAKAGD-EPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (548)
Q Consensus 89 ~~~~~~~~sp-g--~~i~~~~~~~~e~gr~~l~~~~~~~~~-~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~ 164 (548)
..+..+.++| + +.+++.... +|...+|..... . ....+......+.. +.-..+.+|++++..|+.. ..+
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~--~~~~~~~~~~~~~v~~-~~~~~~~~~s~~~~~l~~~-~~d 138 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDF---GGNLHIWNLEAP--EMPVYSVKGHKEIINA-IDGIGGLGIGEGAPEIVTG-SRD 138 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEET---TSCEEEECTTSC--SSCSEEECCCSSCEEE-EEEESGGGCC-CCCEEEEE-ETT
T ss_pred CcEEEEEEcCCCCCCceEEEecC---CCeEEEEeCCCC--CccEEEEEecccceEE-EeeccccccCCCccEEEEE-eCC
Confidence 4566777887 4 455444432 577777765433 2 22333322211111 1000111455666666554 457
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceeccee----eCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGI----FDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~----~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
+.|.+.++..+......+............... |+|+++.|+....+ ..|.++|+.+++ .....
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~---~~~~~ 206 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN---------GDIKLFDLRNMA---LRWET 206 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT---------SEEEEEETTTTE---EEEEE
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC---------CeEEEEECccCc---eeeec
Confidence 788888887621123444432110011233333 88999987775432 378999999987 55555
Q ss_pred ecCCceeeeEECC---CCCEEEEEEecCCCCCCCCceEEEEEecCCCc-eeeeE--EEcCCCCCcccCCcCceECcCCc-
Q 008927 241 SGSDFYAFPRMDP---RGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRV--CVAGFDPTIVESPTEPKWSSKGE- 313 (548)
Q Consensus 241 ~~~~~~~~p~~SP---DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~-~~~~~--~l~~~~~~~~~~~~~~~wspDG~- 313 (548)
..........|+| +|+.|+.... ...|++.++.. ++ ..... .+.+.. ..+....|+|||+
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~-~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~ 273 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSL--------EGKFHVFDMRT-QHPTKGFASVSEKAHK----STVWQVRHLPQNRE 273 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEES--------TTEEEEEEEEE-EETTTEEEEEEEECCS----SCEEEEEEETTEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECC--------CCeEEEEeCcC-CCcccceeeeccCCCc----CCEEEEEECCCCCc
Confidence 4455677889999 9998875441 35788888874 32 11111 112332 4677889999999
Q ss_pred EEEEEeCCCCeeeEEEEe
Q 008927 314 LFFVTDRKNGFWNLHKWI 331 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d 331 (548)
+++.... +|.-.||.+.
T Consensus 274 ~l~~~~~-dg~i~iwd~~ 290 (357)
T 3i2n_A 274 LFLTAGG-AGGLHLWKYE 290 (357)
T ss_dssp EEEEEET-TSEEEEEEEE
T ss_pred EEEEEeC-CCcEEEeecC
Confidence 6776665 6655555443
No 135
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.36 E-value=0.00013 Score=74.49 Aligned_cols=200 Identities=11% Similarity=0.013 Sum_probs=107.6
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE-eeecCCceeeeEECCCCCEEEEEEecCCCCCCC
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~-L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~ 271 (548)
+..+.|+|||+.|+....+ ..|.++|+.+++ ... +......+....|+|||++|+-.+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d---------~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-------- 185 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAED---------RLIRIWDIENRK---IVMILQGHEQDIYSLDYFPSGDKLVSGSG-------- 185 (393)
T ss_dssp EEEEEECTTSSEEEEEETT---------SCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEET--------
T ss_pred EEEEEECCCCCEEEEEcCC---------CeEEEEECCCCc---EEEEEccCCCCEEEEEEcCCCCEEEEecC--------
Confidence 4567899999988775433 358888998886 433 3333444677899999998874442
Q ss_pred CceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc-CCcEEEEEeCCCCeeeEEEEeccCCeeE-eeccccc-ccC
Q 008927 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDA-EFS 348 (548)
Q Consensus 272 ~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp-DG~L~~~sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~-d~~ 348 (548)
...|.+.|+.. ++. ...+... ..+....|+| ||++++.... ++. |..+|+.+++.. .+..... ..+
T Consensus 186 d~~v~iwd~~~-~~~--~~~~~~~-----~~v~~~~~~~~~~~~l~~~s~-d~~--v~iwd~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1erj_A 186 DRTVRIWDLRT-GQC--SLTLSIE-----DGVTTVAVSPGDGKYIAAGSL-DRA--VRVWDSETGFLVERLDSENESGTG 254 (393)
T ss_dssp TSEEEEEETTT-TEE--EEEEECS-----SCEEEEEECSTTCCEEEEEET-TSC--EEEEETTTCCEEEEEC------CC
T ss_pred CCcEEEEECCC-Cee--EEEEEcC-----CCcEEEEEECCCCCEEEEEcC-CCc--EEEEECCCCcEEEeecccccCCCC
Confidence 34688889874 532 2223322 3456788999 7886555544 443 556677776643 2321100 001
Q ss_pred CCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-------------eecCCCceeEee--eecCCEE
Q 008927 349 RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-------------LLDIPFTDIDNI--TLGNDCL 413 (548)
Q Consensus 349 ~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-------------~l~~~~~~~~~~--s~d~~~l 413 (548)
.... .....|.| +++.| ++...++.-.| +|+.++... .+......+..+ ++++..|
T Consensus 255 h~~~---v~~v~~~~---~g~~l-~s~s~d~~v~~--wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 325 (393)
T 1erj_A 255 HKDS---VYSVVFTR---DGQSV-VSGSLDRSVKL--WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI 325 (393)
T ss_dssp CSSC---EEEEEECT---TSSEE-EEEETTSEEEE--EEC---------------CEEEEEECCSSCEEEEEECGGGCEE
T ss_pred CCCC---EEEEEECC---CCCEE-EEEeCCCEEEE--EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEE
Confidence 1111 12245553 55554 45555665444 455433210 111111123333 4556544
Q ss_pred EEEEecCCCCCeEEEEEcCCCce
Q 008927 414 FVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 414 ~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+ .++. -..|+++|+.+++.
T Consensus 326 ~-sgs~---D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 326 L-SGSK---DRGVLFWDKKSGNP 344 (393)
T ss_dssp E-EEET---TSEEEEEETTTCCE
T ss_pred E-EEeC---CCeEEEEECCCCeE
Confidence 3 3332 25788889877653
No 136
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.00012 Score=73.16 Aligned_cols=248 Identities=9% Similarity=0.042 Sum_probs=133.6
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCC-cccCCCCCCccccceeeCCeeeEEEC-CEEEEEeCCCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP-SDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKDQ 165 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~-~~lt~~~~~~r~~v~~ygg~~~~~~~-~~i~F~~~~~~ 165 (548)
..+..+.++| |+.++... .+|...||...... ... +.+......+. .-.|+++. +.++++...++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~-------~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGET-HKLIDTLTGHEGPVW-------RVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp CCEEEEEECSSSSEEEEEE----TTSCEEEEEEETTE-EEEEEEECCCSSCEE-------EEEECCGGGCSEEEEEETTS
T ss_pred ccEEEEEEcCCCCEEEEEE----CCCcEEEEecCCCc-ceeeeEecCCCCcEE-------EEEeCCCCCCCEEEEeccCC
Confidence 5577888999 66655432 25777888764321 111 22222211111 12455441 33444555677
Q ss_pred eEEEEeCCCCCCCc---eecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 166 RLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 166 ~Ly~~~~~~~~~~~---~~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
.|.+.++.. ++. ..+... ...+..+.|+|+ ++.|+....+ ..|.++|+.++.......+.
T Consensus 80 ~v~iwd~~~--~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~~~~~ 144 (379)
T 3jrp_A 80 KVLIWKEEN--GRWSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSD---------GKVSVVEFKENGTTSPIIID 144 (379)
T ss_dssp CEEEEEEET--TEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEECCTTSCCCEEEEE
T ss_pred EEEEEEcCC--CceeEeeeecCC----CcceEEEEeCCCCCCCEEEEecCC---------CcEEEEecCCCCceeeEEec
Confidence 777777765 432 223222 234667889999 8887776433 36888898877411122333
Q ss_pred ecCCceeeeEECC-------------CCCEEEEEEecCCCCCCCCceEEEEEecCCCce-eeeEEEcCCCCCcccCCcCc
Q 008927 241 SGSDFYAFPRMDP-------------RGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 241 ~~~~~~~~p~~SP-------------DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~-~~~~~l~~~~~~~~~~~~~~ 306 (548)
..........|+| |++.|+.... ...|++.++..+... .....+.+.. ..+..+
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~~~~~~~~~~~~~~h~----~~v~~~ 212 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------DNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDV 212 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEET--------TSCEEEEEEETTTTEEEEEEEECCCS----SCEEEE
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeC--------CCeEEEEEecCCCcceeeEEEEeccc----CcEeEE
Confidence 4444567889999 6888875542 346888888743321 1122333332 457789
Q ss_pred eECcC---CcEEEEEeCCCCeeeEEEEeccCCe---eEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCe
Q 008927 307 KWSSK---GELFFVTDRKNGFWNLHKWIESNNE---VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 380 (548)
Q Consensus 307 ~wspD---G~L~~~sd~~~g~~~Ly~~d~~~g~---~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~ 380 (548)
.|+|| |++++.... +|. |..+++.+++ ...+... .....+ .....|.| +++.|+ +...+|.
T Consensus 213 ~~sp~~~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~-~~~~~~-----v~~~~~s~---~g~~l~-~~~~dg~ 279 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQ-DRT--CIIWTQDNEQGPWKKTLLKE-EKFPDV-----LWRASWSL---SGNVLA-LSGGDNK 279 (379)
T ss_dssp EECCCCSSSEEEEEEET-TSC--EEEEEESSTTSCCEEEESSS-SCCSSC-----EEEEEECS---SSCCEE-EEESSSS
T ss_pred EECCCCCCCCeEEEEeC-CCE--EEEEeCCCCCccceeeeecc-ccCCCc-----EEEEEEcC---CCCEEE-EecCCCc
Confidence 99999 776666555 554 4445554543 2222211 011111 12245654 666554 4455777
Q ss_pred EEEEEEEC
Q 008927 381 SYLGILDD 388 (548)
Q Consensus 381 ~~L~~~dl 388 (548)
-++|.++.
T Consensus 280 i~iw~~~~ 287 (379)
T 3jrp_A 280 VTLWKENL 287 (379)
T ss_dssp EEEEEEEE
T ss_pred EEEEeCCC
Confidence 66766653
No 137
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.35 E-value=0.00035 Score=68.40 Aligned_cols=247 Identities=12% Similarity=0.072 Sum_probs=134.5
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| |..++--. .+|...||..... ...+.+......++ ...|+++++.|+-. ..++.|
T Consensus 14 ~~V~~~~fsp~~~~l~s~~----~dg~v~lWd~~~~--~~~~~~~~~~~~v~-------~~~~~~~~~~l~s~-s~d~~i 79 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTL----YSGRVELWNYETQ--VEVRSIQVTETPVR-------AGKFIARKNWIIVG-SDDFRI 79 (304)
T ss_dssp SCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT--EEEEEEECCSSCEE-------EEEEEGGGTEEEEE-ETTSEE
T ss_pred CceEEEEECCCCCEEEEEc----CCCcEEEEECCCC--ceeEEeeccCCcEE-------EEEEeCCCCEEEEE-CCCCEE
Confidence 4577889999 66554332 2577778866432 12233322211111 13566777665544 356778
Q ss_pred EEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE-eeecCCc
Q 008927 168 YKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV-LVSGSDF 245 (548)
Q Consensus 168 y~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~-L~~~~~~ 245 (548)
.+.++.. ++. ..+... ...+....|+|+++.|+....+ ..|.++|+.++.. ... +......
T Consensus 80 ~vwd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~sgs~D---------~~v~lWd~~~~~~--~~~~~~~h~~~ 142 (304)
T 2ynn_A 80 RVFNYNT--GEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWENNWA--LEQTFEGHEHF 142 (304)
T ss_dssp EEEETTT--CCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SCEEEEEGGGTTE--EEEEECCCCSC
T ss_pred EEEECCC--CcEEEEEeCC----CCcEEEEEEcCCCCEEEEECCC---------CeEEEEECCCCcc--hhhhhcccCCc
Confidence 8888876 443 334332 2345677899999987665433 2577788887641 222 3333445
Q ss_pred eeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc--CCcEEEEEeCCC
Q 008927 246 YAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS--KGELFFVTDRKN 322 (548)
Q Consensus 246 ~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp--DG~L~~~sd~~~ 322 (548)
+....|+| |++.|+-... ...|.+.|+.. +.. ......+.. ..+....|+| |+++++.... +
T Consensus 143 v~~v~~~p~~~~~l~sgs~--------D~~v~iwd~~~-~~~-~~~~~~~~~----~~v~~~~~~~~~~~~~l~s~s~-D 207 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCL--------DRTVKVWSLGQ-STP-NFTLTTGQE----RGVNYVDYYPLPDKPYMITASD-D 207 (304)
T ss_dssp EEEEEECTTCTTEEEEEET--------TSEEEEEETTC-SSC-SEEEECCCT----TCEEEEEECCSTTCCEEEEEET-T
T ss_pred EEEEEECCCCCCEEEEEeC--------CCeEEEEECCC-CCc-cceeccCCc----CcEEEEEEEEcCCCCEEEEEcC-C
Confidence 67778999 6777763331 34688888864 321 122222222 3345566766 6665555444 4
Q ss_pred CeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eec
Q 008927 323 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLD 397 (548)
Q Consensus 323 g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~ 397 (548)
+ .|..+|+.+++....... .... .....+.| ++. ++++...++. |.+.|+.+++.. .+.
T Consensus 208 ~--~i~iWd~~~~~~~~~~~~-----h~~~---v~~~~~~p---~~~-~l~s~s~Dg~--i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 208 L--TIKIWDYQTKSCVATLEG-----HMSN---VSFAVFHP---TLP-IIISGSEDGT--LKIWNSSTYKVEKTLN 267 (304)
T ss_dssp S--EEEEEETTTTEEEEEEEC-----CSSC---EEEEEECS---SSS-EEEEEETTSC--EEEEETTTCCEEEEEC
T ss_pred C--eEEEEeCCCCccceeeCC-----CCCC---EEEEEECC---CCC-EEEEEcCCCe--EEEEECCCCceeeecc
Confidence 4 466677777764332211 0011 11234543 555 4456656665 455688777654 444
No 138
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.35 E-value=3e-05 Score=77.98 Aligned_cols=243 Identities=7% Similarity=-0.030 Sum_probs=132.5
Q ss_pred ccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEEE
Q 008927 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYK 169 (548)
Q Consensus 90 ~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~ 169 (548)
.+..+.++|.++++ ... .+|.-.||..... .....+......-...|. .-+|++++..|+-. ..++.|.+
T Consensus 84 ~v~~~~~s~d~~l~-~~s---~dg~v~lWd~~~~--~~~~~~~~~~~~H~~~V~---~v~~spdg~~l~sg-s~d~~i~i 153 (344)
T 4gqb_B 84 GVADLTWVGERGIL-VAS---DSGAVELWELDEN--ETLIVSKFCKYEHDDIVS---TVSVLSSGTQAVSG-SKDICIKV 153 (344)
T ss_dssp CEEEEEEETTTEEE-EEE---TTSEEEEEEECTT--SSCEEEEEEEECCSSCEE---EEEECTTSSEEEEE-ETTSCEEE
T ss_pred CEEEEEEeCCCeEE-EEE---CCCEEEEEeccCC--CceeEeeccccCCCCCEE---EEEECCCCCEEEEE-eCCCeEEE
Confidence 35677888644443 322 2577778876443 112111100000011111 12566677666544 45677888
Q ss_pred EeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee-cC-Cce
Q 008927 170 HSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GS-DFY 246 (548)
Q Consensus 170 ~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~-~~-~~~ 246 (548)
.++.. ++. +.+... ...+....|+|++..+++..... ..|.++|+.+++. ...+.. .. ...
T Consensus 154 wd~~~--~~~~~~~~~h----~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~~~~~--~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 154 WDLAQ--QVVLSSYRAH----AAQVTCVAASPHKDSVFLSCSED--------NRILLWDTRCPKP--ASQIGCSAPGYLP 217 (344)
T ss_dssp EETTT--TEEEEEECCC----SSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTSSSC--EEECC----CCCE
T ss_pred EECCC--CcEEEEEcCc----CCceEEEEecCCCCCceeeeccc--------cccccccccccce--eeeeecceeeccc
Confidence 88876 443 333332 23455678999997655543321 3578889998872 233321 12 234
Q ss_pred eeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCee
Q 008927 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFW 325 (548)
Q Consensus 247 ~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~ 325 (548)
....|+|++.+++..... ...|.+.|+.. ++ ....+.+.. ..+....|+|||. +++.... ++
T Consensus 218 ~~~~~~p~~~~~l~sg~~-------dg~v~~wd~~~-~~--~~~~~~~h~----~~v~~v~fsp~g~~~lasgs~-D~-- 280 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDE-------NGTVSLVDTKS-TS--CVLSSAVHS----QCVTGLVFSPHSVPFLASLSE-DC-- 280 (344)
T ss_dssp EEEEECSSCTTEEEEEET-------TSEEEEEESCC-----CCEEEECCS----SCEEEEEECSSSSCCEEEEET-TS--
T ss_pred eeeeecCCCCcceEEecc-------CCcEEEEECCC-Cc--EEEEEcCCC----CCEEEEEEccCCCeEEEEEeC-CC--
Confidence 567899976654433321 35688889874 43 234455543 4677889999996 6655443 34
Q ss_pred eEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 326 NLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 326 ~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
.|.++|+.+++...+.. ...++ ....|.| +++.|+++...++.-.++.++
T Consensus 281 ~i~vwd~~~~~~~~~~~------H~~~V---~~v~~sp---~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 281 SLAVLDSSLSELFRSQA------HRDFV---RDATWSP---LNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp CEEEECTTCCEEEEECC------CSSCE---EEEEECS---SSTTEEEEEETTSCEEEEECC
T ss_pred eEEEEECCCCcEEEEcC------CCCCE---EEEEEeC---CCCeEEEEEcCCCeEEEEECC
Confidence 46677888887654421 11111 2345665 777787777777766555443
No 139
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.34 E-value=9.2e-05 Score=76.18 Aligned_cols=201 Identities=10% Similarity=0.076 Sum_probs=115.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCC--CCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~--~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+|.+.++.|||++...++|+++++++.. ...+.+.... ......+++++.++.|+++ +.. ...|.++
T Consensus 118 ~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~---~~~p~glavD~~~~~lY~~-d~~-------~~~I~~~ 186 (400)
T 3p5b_L 118 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---IQAPDGLAVDWIHSNIYWT-DSV-------LGTVSVA 186 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS---CSCEEEEEEETTTTEEEEE-ETT-------TTEEEEE
T ss_pred eeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC---CCCcccEEEEecCCceEEE-ECC-------CCeEEEE
Confidence 4555578999998888899999998621 1233332210 1123456777777777664 321 2479999
Q ss_pred ECCCCCccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 227 ALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 227 dl~~g~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
+++++. .+.+.. +...-...++.|.+.+|+|..|.. ...|+.+++++.. ...++...- .....
T Consensus 187 ~~~g~~---~~~l~~~~~~~P~~iavdp~~g~ly~td~~~------~~~I~~~~~dG~~---~~~~~~~~l----~~P~g 250 (400)
T 3p5b_L 187 DTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVD---IYSLVTENI----QWPNG 250 (400)
T ss_dssp CTTTCS---EEEEEECSSCCEEEEEEETTTTEEEEEECSS------SCCEEEEETTSCS---CEEEECSSC----SCEEE
T ss_pred eCCCCc---eEEEEeCCCCCcceEEEecccCeEEEEeCCC------CCEEEEEeCCCCc---cEEEEECCC----CceEE
Confidence 999886 555554 222234557899888898876532 3579999987322 122333221 23456
Q ss_pred ceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 306 ~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
+.++++++.+|++|. +...|++++++++..+.+.........| .+ ++. +++.||++- -+...|++
T Consensus 251 lavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P---~g---l~v-----~~~~lywtd--~~~~~V~~ 315 (400)
T 3p5b_L 251 ITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP---FS---LAV-----FEDKVFWTD--IINEAIFS 315 (400)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSE---EE---EEE-----ETTEEEEEE--SSSCSEEE
T ss_pred EEEEeCCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCC---EE---EEE-----eCCEEEEec--CCCCeEEE
Confidence 789988774444554 3357999998776655554221111111 11 222 456676654 23445777
Q ss_pred EECCCC
Q 008927 386 LDDFGH 391 (548)
Q Consensus 386 ~dl~~g 391 (548)
+|..+|
T Consensus 316 ~~~~~G 321 (400)
T 3p5b_L 316 ANRLTG 321 (400)
T ss_dssp EESSSC
T ss_pred EEcCCC
Confidence 775555
No 140
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=98.34 E-value=4.9e-07 Score=90.53 Aligned_cols=71 Identities=20% Similarity=0.213 Sum_probs=57.7
Q ss_pred cCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCC
Q 008927 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 459 ~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGy 538 (548)
...+.++|++. ||.+|+++++.|++ . +++.|+||++||++... ++....+.|+++||+|+.+|+||..+.
T Consensus 66 ~~~~~~~~~~~-dg~~i~~~~~~P~~--~----~~~~p~vv~~HG~g~~~---~~~~~~~~l~~~G~~v~~~d~rG~g~s 135 (337)
T 1vlq_A 66 VEAYDVTFSGY-RGQRIKGWLLVPKL--E----EEKLPCVVQYIGYNGGR---GFPHDWLFWPSMGYICFVMDTRGQGSG 135 (337)
T ss_dssp EEEEEEEEECG-GGCEEEEEEEEECC--S----CSSEEEEEECCCTTCCC---CCGGGGCHHHHTTCEEEEECCTTCCCS
T ss_pred eEEEEEEEEcC-CCCEEEEEEEecCC--C----CCCccEEEEEcCCCCCC---CCchhhcchhhCCCEEEEecCCCCCCc
Confidence 35788999997 99999999999964 1 35679999999998653 344556789999999999999998854
Q ss_pred C
Q 008927 539 S 539 (548)
Q Consensus 539 G 539 (548)
+
T Consensus 136 ~ 136 (337)
T 1vlq_A 136 W 136 (337)
T ss_dssp S
T ss_pred c
Confidence 3
No 141
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.34 E-value=8.8e-05 Score=76.78 Aligned_cols=208 Identities=7% Similarity=0.026 Sum_probs=116.4
Q ss_pred CCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCC--------CCCcccCCCCCCccccceeeCCeeeEEECCEE
Q 008927 87 ASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAG--------DEPSDITPKEYAVRTTAQEYGGGAFRIFGDTV 157 (548)
Q Consensus 87 ~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~--------~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i 157 (548)
....+..++++| ++.++.... ++|...||....... .....+..... .+ -.-+|++++..+
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~---~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~----~v---~~l~~~~~~~~~ 196 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKT---PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK----EG---YGLSWNPNLNGY 196 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEEC---SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS----CC---CCEEECTTSTTE
T ss_pred CCCcEEEEEECCCCCcEEEEEC---CCCcEEEEECCCcccccCccccCCCcEEecCCCC----Ce---EEEEeCCCCCCe
Confidence 335677888998 566666543 257778887754200 00111111100 00 112566666645
Q ss_pred EEEeCCCCeEEEEeCCCCCCC------ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCC
Q 008927 158 IFSNYKDQRLYKHSIDSKDSS------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (548)
Q Consensus 158 ~F~~~~~~~Ly~~~~~~~~~~------~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g 231 (548)
+.+...++.|.+.++..+... .+.+... ...+.+..|+|++..++++.... ..|.++|+.++
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~s~~~d--------g~i~i~d~~~~ 264 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGH----TAVVEDVAWHLLHESLFGSVADD--------QKLMIWDTRNN 264 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCC----SSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCS
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCC----CCCEeeeEEeCCCCCEEEEEeCC--------CeEEEEECCCC
Confidence 566667788888888652011 1222222 23466788999555444443321 47889999876
Q ss_pred Cc-cCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc
Q 008927 232 NI-QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 232 ~~-~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp 310 (548)
.. .....+...........|+|+|+.++.+... ...|.+.++...+. ....+.... ..+....|+|
T Consensus 265 ~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~-------dg~v~vwd~~~~~~--~~~~~~~h~----~~v~~i~~sp 331 (430)
T 2xyi_A 265 NTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA-------DKTVALWDLRNLKL--KLHSFESHK----DEIFQVQWSP 331 (430)
T ss_dssp CSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET-------TSEEEEEETTCTTS--CSEEEECCS----SCEEEEEECS
T ss_pred CCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC-------CCeEEEEeCCCCCC--CeEEeecCC----CCEEEEEECC
Confidence 21 0133443334446778999999975545422 35799999875332 233344333 4678899999
Q ss_pred CCc-EEEEEeCCCCeeeEEEE
Q 008927 311 KGE-LFFVTDRKNGFWNLHKW 330 (548)
Q Consensus 311 DG~-L~~~sd~~~g~~~Ly~~ 330 (548)
+|+ +++.... +|.-.||-+
T Consensus 332 ~~~~~l~s~~~-d~~i~iwd~ 351 (430)
T 2xyi_A 332 HNETILASSGT-DRRLHVWDL 351 (430)
T ss_dssp SCTTEEEEEET-TSCCEEEEG
T ss_pred CCCCEEEEEeC-CCcEEEEeC
Confidence 998 7777655 554444433
No 142
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.33 E-value=8.5e-05 Score=76.04 Aligned_cols=162 Identities=15% Similarity=0.182 Sum_probs=102.3
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
.|.+.++.|||++...++|+++++++ +..+.+.... ...-..+++++.+..|++. +.. ...|+++++
T Consensus 122 ~~d~~~~~ly~~D~~~~~I~r~~~~g--~~~~~~~~~~---~~~p~glavd~~~g~lY~~-d~~-------~~~I~~~~~ 188 (386)
T 3v65_B 122 DFHHRRELVFWSDVTLDRILRANLNG--SNVEEVVSTG---LESPGGLAVDWVHDKLYWT-DSG-------TSRIEVANL 188 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTS--CCEEEEECSS---CSCCCCEEEETTTTEEEEE-ETT-------TTEEEECBT
T ss_pred EEecCCCeEEEEeCCCCcEEEEecCC--CCcEEEEeCC---CCCccEEEEEeCCCeEEEE-cCC-------CCeEEEEeC
Confidence 45555779999988888999999987 5555443220 1123456788888887665 321 247999999
Q ss_pred CCCCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 229 NGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 229 ~~g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
++.. .+.+... ...-...+++|++.+|+|..+.. ...|+.+++++.. ...++...- .....+.
T Consensus 189 dg~~---~~~l~~~~l~~P~giavdp~~g~ly~td~~~------~~~I~r~~~dG~~---~~~~~~~~~----~~PnGla 252 (386)
T 3v65_B 189 DGAH---RKVLLWQSLEKPRAIALHPMEGTIYWTDWGN------TPRIEASSMDGSG---RRIIADTHL----FWPNGLT 252 (386)
T ss_dssp TSCS---CEEEECSSCSCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCS---CEEEECSSC----SCEEEEE
T ss_pred CCCc---eEEeecCCCCCCcEEEEEcCCCeEEEeccCC------CCEEEEEeCCCCC---cEEEEECCC----CCeeeEE
Confidence 9876 5555532 22334567899999898776432 2689999987321 122232221 2345688
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
|+|++..+|++|. +...|+++++++...+.+.
T Consensus 253 vd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~ 284 (386)
T 3v65_B 253 IDYAGRRMYWVDA--KHHVIERANLDGSHRKAVI 284 (386)
T ss_dssp EEGGGTEEEEEET--TTTEEEEECTTSCSCEEEE
T ss_pred EeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEE
Confidence 9988774444454 2347999998765544443
No 143
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.32 E-value=0.00089 Score=67.20 Aligned_cols=268 Identities=10% Similarity=0.068 Sum_probs=140.4
Q ss_pred CCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCC
Q 008927 87 ASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQ 165 (548)
Q Consensus 87 ~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~ 165 (548)
....+..+.++| |.+++--. .+|...||..... .....+......+. .-+|+|++..|+-. ..++
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s----~Dg~v~vWd~~~~--~~~~~~~~~~~~v~-------~~~~sp~g~~lasg-~~d~ 128 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSS----QDGKVIVWDSFTT--NKEHAVTMPCTWVM-------ACAYAPSGCAIACG-GLDN 128 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTC--CEEEEEECSSSCCC-------EEEECTTSSEEEEE-STTS
T ss_pred CCCeEEEEEECCCCCEEEEEe----CCCeEEEEECCCC--CcceEEecCCCCEE-------EEEECCCCCEEEEe-eCCC
Confidence 335677888888 65554332 2577777755322 11222221111111 12567777666544 4556
Q ss_pred eEEEEeCCCCCCC-----ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE-e
Q 008927 166 RLYKHSIDSKDSS-----PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV-L 239 (548)
Q Consensus 166 ~Ly~~~~~~~~~~-----~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~-L 239 (548)
.+.+.++..+..+ ...+... ...+....|+|+++.|+....+ ..|.++|+.+++ ... +
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~t~s~D---------~~v~lwd~~~~~---~~~~~ 192 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMH----TNYLSACSFTNSDMQILTASGD---------GTCALWDVESGQ---LLQSF 192 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEEC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCC---EEEEE
T ss_pred CEEEEEEeccccccccccceeeecc----CCcEEEEEEeCCCCEEEEEeCC---------CcEEEEeCCCCe---EEEEE
Confidence 5555555431011 1112111 1234567899999988765433 368888999887 433 3
Q ss_pred eecCCceeeeEECC--CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEE
Q 008927 240 VSGSDFYAFPRMDP--RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFV 317 (548)
Q Consensus 240 ~~~~~~~~~p~~SP--DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~ 317 (548)
......+....|+| +|+.|+-... ...|.+.|+.. ++ ....+.+.. ..+....|+|||++++.
T Consensus 193 ~~h~~~v~~~~~~~~~~g~~l~sgs~--------Dg~v~~wd~~~-~~--~~~~~~~h~----~~v~~v~~~p~~~~l~s 257 (354)
T 2pbi_B 193 HGHGADVLCLDLAPSETGNTFVSGGC--------DKKAMVWDMRS-GQ--CVQAFETHE----SDVNSVRYYPSGDAFAS 257 (354)
T ss_dssp ECCSSCEEEEEECCCSSCCEEEEEET--------TSCEEEEETTT-CC--EEEEECCCS----SCEEEEEECTTSSEEEE
T ss_pred cCCCCCeEEEEEEeCCCCCEEEEEeC--------CCeEEEEECCC-Cc--EEEEecCCC----CCeEEEEEeCCCCEEEE
Confidence 32333344556766 5777764431 34688889874 43 233344433 45778899999995555
Q ss_pred EeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce-Eee
Q 008927 318 TDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL-SLL 396 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~-~~l 396 (548)
... ++ .|.++|+.+++...+..... ...+.....+.| ++..| ++...++. |.++|+.+++. ..+
T Consensus 258 ~s~-D~--~v~lwd~~~~~~~~~~~~~~------~~~~~~~~~~s~---~g~~l-~~g~~d~~--i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 258 GSD-DA--TCRLYDLRADREVAIYSKES------IIFGASSVDFSL---SGRLL-FAGYNDYT--INVWDVLKGSRVSIL 322 (354)
T ss_dssp EET-TS--CEEEEETTTTEEEEEECCTT------CCSCEEEEEECT---TSSEE-EEEETTSC--EEEEETTTCSEEEEE
T ss_pred EeC-CC--eEEEEECCCCcEEEEEcCCC------cccceeEEEEeC---CCCEE-EEEECCCc--EEEEECCCCceEEEE
Confidence 444 44 35556766665433322110 011222345553 55544 45545554 55668777653 344
Q ss_pred cCCCceeEee--eecCCEEE
Q 008927 397 DIPFTDIDNI--TLGNDCLF 414 (548)
Q Consensus 397 ~~~~~~~~~~--s~d~~~l~ 414 (548)
......+..+ +++++.|+
T Consensus 323 ~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 323 FGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp CCCSSCEEEEEECTTSSCEE
T ss_pred ECCCCcEEEEEECCCCCEEE
Confidence 3333345444 56666543
No 144
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.32 E-value=0.00013 Score=73.90 Aligned_cols=234 Identities=9% Similarity=-0.043 Sum_probs=130.5
Q ss_pred EEEEeCCCCeEEEEeCCCCCCC-------ceecCCCCCCCCceecceeeCCC----C---CEEEEEEeccCCCCCCceeE
Q 008927 157 VIFSNYKDQRLYKHSIDSKDSS-------PLPITPDYGEPLVSYADGIFDPR----F---NRYVTVREDRRQDALNSTTE 222 (548)
Q Consensus 157 i~F~~~~~~~Ly~~~~~~~~~~-------~~~lT~~~~~~~~~~~~~~~SpD----G---~~i~~v~~~~~~~~~~~~~~ 222 (548)
++++...++.|++.++.. ++ ...+... ...+..+.|+|+ | +.|+....+ ..
T Consensus 28 ~l~s~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---------g~ 92 (397)
T 1sq9_A 28 FTVSCSGDGYLKVWDNKL--LDNENPKDKSYSHFVH----KSGLHHVDVLQAIERDAFELCLVATTSFS---------GD 92 (397)
T ss_dssp EEEEEETTSEEEEEESBC--CTTCCGGGGEEEEECC----TTCEEEEEEEEEEETTTEEEEEEEEEETT---------SC
T ss_pred eEEEEcCCCEEEEEECCC--cccccCCCcceEEecC----CCcEEEEEEecccccCCccccEEEEEcCC---------CC
Confidence 444445678888888876 44 3333332 234567789999 8 877665433 24
Q ss_pred EEEEECCCCCccCc-----EEeeecC------CceeeeEEC----CCCCE-EEEEEecCCCCCCCCceEEEEEecC----
Q 008927 223 IVAIALNGQNIQEP-----KVLVSGS------DFYAFPRMD----PRGER-MAWIEWHHPNMPWDKAELWVGYISE---- 282 (548)
Q Consensus 223 l~~idl~~g~~~~~-----~~L~~~~------~~~~~p~~S----PDGk~-La~~~~~~~~~p~~~~~L~v~~~~~---- 282 (548)
|.++|+.+++ . ....... ..+....|+ |||+. |+.... ...|++.++..
T Consensus 93 i~iw~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~--------dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 93 LLFYRITRED---ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV--------KGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEEEEEECT---TTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET--------TSCEEEEEEESSSSH
T ss_pred EEEEEccCCc---ccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC--------CCcEEEEeCCccccc
Confidence 7777777765 3 2222222 456778999 99998 765442 34688888874
Q ss_pred --CCcee--eeEEEc-------CCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeeccccccc---C
Q 008927 283 --NGDVY--KRVCVA-------GFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEF---S 348 (548)
Q Consensus 283 --~g~~~--~~~~l~-------~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~---~ 348 (548)
...+. ....+. ... ..+....|+||| ++++... +| .|..+|+.+++........... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~-~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPS----QFATSVDISERG-LIATGFN-NG--TVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSC----CCCCEEEECTTS-EEEEECT-TS--EEEEEETTTTEEEEEEECCC---CCC
T ss_pred cccceeeccCcceeeeeeccccCCC----CCceEEEECCCc-eEEEEeC-CC--cEEEEECCCCceeEEEeccccccccC
Confidence 22211 000231 112 457788999999 6666554 44 5777787777654332210000 1
Q ss_pred CCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecC-------------CCceeEee--eecCCE
Q 008927 349 RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDI-------------PFTDIDNI--TLGNDC 412 (548)
Q Consensus 349 ~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~-------------~~~~~~~~--s~d~~~ 412 (548)
.+ .....|.| +++.|+.....++...|.++|+.+++.. .+.. ....+..+ +++++.
T Consensus 234 ~~-----i~~i~~~~---~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 234 NS-----IRSVKFSP---QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp CC-----EEEEEECS---STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred Cc-----cceEEECC---CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 11 12245554 6666665544444467889999877643 4433 22234444 566665
Q ss_pred EEEEEecCCCCCeEEEEEcCCCce
Q 008927 413 LFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 413 l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
|+. ++. ...|.++|+.+++.
T Consensus 306 l~~-~~~---dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 306 LCS-AGW---DGKLRFWDVKTKER 325 (397)
T ss_dssp EEE-EET---TSEEEEEETTTTEE
T ss_pred EEE-EeC---CCeEEEEEcCCCce
Confidence 543 332 35788999877753
No 145
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.32 E-value=0.00056 Score=70.23 Aligned_cols=262 Identities=11% Similarity=0.090 Sum_probs=141.4
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| +..++- .. ++|...||..... ...+.+....-.+. .-+|++++.. +.+...++.|
T Consensus 109 ~~V~~~~~~p~~~~l~s-~s---~Dg~i~vwd~~~~--~~~~~l~~h~~~V~-------~v~~~~~~~~-l~sgs~D~~i 174 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVS-AS---EDATIKVWDYETG--DFERTLKGHTDSVQ-------DISFDHSGKL-LASCSADMTI 174 (410)
T ss_dssp SCEEEEEECSSSSEEEE-EE---SSSCEEEEETTTC--CCCEEECCCSSCEE-------EEEECTTSSE-EEEEETTSCC
T ss_pred CcEEEEEEcCCCCEEEE-Ee---CCCeEEEEECCCC--cEEEEEeccCCcEE-------EEEEcCCCCE-EEEEeCCCeE
Confidence 4566778888 554433 22 2577777866433 12333332211111 1245555554 4444456767
Q ss_pred EEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCce
Q 008927 168 YKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFY 246 (548)
Q Consensus 168 y~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~ 246 (548)
.+.++.+ ++. +.+... ...+....|+|+|+.|+....+ ..|.++|+.++.. ...+......+
T Consensus 175 ~iwd~~~--~~~~~~~~~h----~~~V~~v~~~p~~~~l~s~s~D---------~~i~~wd~~~~~~--~~~~~~h~~~v 237 (410)
T 1vyh_C 175 KLWDFQG--FECIRTMHGH----DHNVSSVSIMPNGDHIVSASRD---------KTIKMWEVQTGYC--VKTFTGHREWV 237 (410)
T ss_dssp CEEETTS--SCEEECCCCC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEETTTCCE--EEEEECCSSCE
T ss_pred EEEeCCC--CceeEEEcCC----CCCEEEEEEeCCCCEEEEEeCC---------CeEEEEECCCCcE--EEEEeCCCccE
Confidence 6667765 443 233222 2346677899999987765433 3688899998862 33444444456
Q ss_pred eeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcC---------------
Q 008927 247 AFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK--------------- 311 (548)
Q Consensus 247 ~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspD--------------- 311 (548)
....++|||+.|+-... ...|.+.++.. ++. ...+.+.. ..+....|+|+
T Consensus 238 ~~~~~~~~g~~l~s~s~--------D~~v~vwd~~~-~~~--~~~~~~h~----~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 238 RMVRPNQDGTLIASCSN--------DQTVRVWVVAT-KEC--KAELREHR----HVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp EEEEECTTSSEEEEEET--------TSCEEEEETTT-CCE--EEEECCCS----SCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred EEEEECCCCCEEEEEcC--------CCeEEEEECCC-Cce--eeEecCCC----ceEEEEEEcCcccccchhhhcccccc
Confidence 67789999998874441 24577888874 431 23333332 34666788886
Q ss_pred -----CcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 312 -----GELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 312 -----G~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
|.+++.... ++ .|..+|+.+++....... ...++. ...+.| +++.|+ +...++. |.+.
T Consensus 303 ~~~~~g~~l~sgs~-D~--~i~iwd~~~~~~~~~~~~-----h~~~v~---~v~~~~---~g~~l~-s~s~D~~--i~vw 365 (410)
T 1vyh_C 303 KSGKPGPFLLSGSR-DK--TIKMWDVSTGMCLMTLVG-----HDNWVR---GVLFHS---GGKFIL-SCADDKT--LRVW 365 (410)
T ss_dssp -----CCEEEEEET-TS--EEEEEETTTTEEEEEEEC-----CSSCEE---EEEECS---SSSCEE-EEETTTE--EEEE
T ss_pred ccCCCCCEEEEEeC-CC--eEEEEECCCCceEEEEEC-----CCCcEE---EEEEcC---CCCEEE-EEeCCCe--EEEE
Confidence 444444443 34 477778877764322211 112221 234553 555554 5555564 5556
Q ss_pred ECCCCc-eEeecCCCceeEee--eecCCEE
Q 008927 387 DDFGHS-LSLLDIPFTDIDNI--TLGNDCL 413 (548)
Q Consensus 387 dl~~g~-~~~l~~~~~~~~~~--s~d~~~l 413 (548)
|+.+++ +..+......+..+ ++++..+
T Consensus 366 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 395 (410)
T 1vyh_C 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 395 (410)
T ss_dssp CCTTSCCCEEEECCSSCEEEEEECSSSSCE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEcCCCCEE
Confidence 776664 34444333334444 4555543
No 146
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.32 E-value=0.00018 Score=71.46 Aligned_cols=234 Identities=13% Similarity=0.076 Sum_probs=135.7
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.|+|.+ ...|.++++++...+...+... ......+.|++.++.|+++ +.. ...|++++++++.. .
T Consensus 6 ~ll~~~--~~~I~~i~l~~~~~~~~~~~~~----~~~~~~ld~d~~~~~lyw~-D~~-------~~~I~r~~~~g~~~-~ 70 (318)
T 3sov_A 6 LLLYAN--RRDLRLVDATNGKENATIVVGG----LEDAAAVDFVFSHGLIYWS-DVS-------EEAIKRTEFNKTES-V 70 (318)
T ss_dssp EEEEEC--EEEEEEEETTCTTSCCEEEEEE----EEEEEEEEEEGGGTEEEEE-ETT-------TTEEEEEETTSSSC-C
T ss_pred EEEEEc--cCeEEEEECCCCceEEEEEecC----CCccEEEEEEeCCCEEEEE-ECC-------CCcEEEEEccCCCc-e
Confidence 578886 5679999998721022222221 1123456799888887665 322 24799999988741 0
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEE
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELF 315 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~ 315 (548)
...+..+...-...++.+.+..|+|... ....|.++++++ .. ...++.... .........|++..+
T Consensus 71 ~~~~~~~l~~p~glavd~~~g~ly~~d~-------~~~~I~~~~~dG--~~-~~~l~~~~~----~~P~giavdp~~g~l 136 (318)
T 3sov_A 71 QNVVVSGLLSPDGLACDWLGEKLYWTDS-------ETNRIEVSNLDG--SL-RKVLFWQEL----DQPRAIALDPSSGFM 136 (318)
T ss_dssp CEEEEECCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETTS--CS-CEEEECSSC----SSEEEEEEEGGGTEE
T ss_pred EEEEcCCCCCccEEEEEcCCCeEEEEEC-------CCCEEEEEECCC--Cc-EEEEEeCCC----CCccEEEEeCCCCEE
Confidence 2334443333345677877888877652 245799999863 21 122232221 234456777765544
Q ss_pred EEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEe
Q 008927 316 FVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (548)
Q Consensus 316 ~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~ 395 (548)
|.+|. .....|+++++++...+.+... .+..| ..+++.+ +++.||++- .+...|+++|++++..+.
T Consensus 137 y~td~-~~~~~I~r~~~dG~~~~~~~~~--~l~~P------nglavd~---~~~~lY~aD--~~~~~I~~~d~dG~~~~~ 202 (318)
T 3sov_A 137 YWTDW-GEVPKIERAGMDGSSRFIIINS--EIYWP------NGLTLDY---EEQKLYWAD--AKLNFIHKSNLDGTNRQA 202 (318)
T ss_dssp EEEEC-SSSCEEEEEETTSCSCEEEECS--SCSCE------EEEEEET---TTTEEEEEE--TTTTEEEEEETTSCSCEE
T ss_pred EEEec-CCCCEEEEEEcCCCCeEEEEEC--CCCCc------cEEEEec---cCCEEEEEE--CCCCEEEEEcCCCCceEE
Confidence 45554 2346799999876554444321 12222 1245543 678888763 345679999998766555
Q ss_pred ecC-CCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 396 LDI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 396 l~~-~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.. ....-.+++.+++.+|++- .....|++++..+++
T Consensus 203 ~~~~~~~~P~glav~~~~lywtd---~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 203 VVKGSLPHPFALTLFEDILYWTD---WSTHSILACNKYTGE 240 (318)
T ss_dssp EECSCCSCEEEEEEETTEEEEEE---TTTTEEEEEETTTCC
T ss_pred EecCCCCCceEEEEeCCEEEEEe---cCCCeEEEEECCCCC
Confidence 433 2222334556777777663 245689999986665
No 147
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.32 E-value=0.00017 Score=77.44 Aligned_cols=201 Identities=10% Similarity=0.106 Sum_probs=119.2
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCC----CccCcEEeeecCCc-eeeeEECC--CCCEEEEEEec
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ----NIQEPKVLVSGSDF-YAFPRMDP--RGERMAWIEWH 264 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g----~~~~~~~L~~~~~~-~~~p~~SP--DGk~La~~~~~ 264 (548)
....+.|||||+.|++.. + ..|.++|++++ +. ...+....+. +....||| ||++|+... .
T Consensus 20 ~v~~~~~spdg~~l~~~~-~---------~~v~v~~~~~~~~~~~~--~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-~ 86 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-G---------KSAFVRCLDDGDSKVPP--VVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-E 86 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-T---------TEEEEEECCSSCCSSCS--EEEECTTTTSCEEEEEECSSTTCCEEEEEE-T
T ss_pred ceeEEEECCCCCEEEEec-C---------CeEEEEECCCCCCcccc--ceEEecCCCceEEEEEECcCCCCCEEEEec-C
Confidence 456778999999988864 2 26888898877 41 4445545556 77889999 999888544 1
Q ss_pred CCCCCCCCceEEEEEecCCC------ceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCee
Q 008927 265 HPNMPWDKAELWVGYISENG------DVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 265 ~~~~p~~~~~L~v~~~~~~g------~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
...|.+.++.. + +......+.... ..+....|+|||+ |+...+.......|+.++. +...
T Consensus 87 -------dg~v~vw~~~~-~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~-~~~~ 153 (615)
T 1pgu_A 87 -------SGKVIVWGWTF-DKESNSVEVNVKSEFQVLA----GPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-GNSL 153 (615)
T ss_dssp -------TSEEEEEEEEE-EGGGTEEEEEEEEEEECCS----SCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-CCEE
T ss_pred -------CCEEEEEeCCC-Ccccccccccccchhhccc----ccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC-CCcc
Confidence 34688888853 2 111223333333 5678899999999 6555543244567888872 2233
Q ss_pred EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCc---eeEee--eec-C
Q 008927 338 LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFT---DIDNI--TLG-N 410 (548)
Q Consensus 338 ~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~---~~~~~--s~d-~ 410 (548)
..+... ... .....|.| +++.++++...++. +.++|+.+++.. .+..... .+..+ +++ +
T Consensus 154 ~~~~~~----~~~-----v~~~~~~~---~~~~~l~~~~~d~~--v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (615)
T 1pgu_A 154 GEVSGH----SQR-----INACHLKQ---SRPMRSMTVGDDGS--VVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG 219 (615)
T ss_dssp EECCSC----SSC-----EEEEEECS---SSSCEEEEEETTTE--EEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC
T ss_pred eeeecC----Ccc-----EEEEEECC---CCCcEEEEEeCCCc--EEEEeCCCcceeeeecccCCCCceEEEEEECCCCC
Confidence 333211 111 11244554 56545666665554 555677776543 3333333 35444 567 5
Q ss_pred CEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 411 DCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 411 ~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+.++ +++. ...|+++|+.+++.
T Consensus 220 ~~l~-~~~~---dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 220 EFVI-TVGS---DRKISCFDGKSGEF 241 (615)
T ss_dssp CEEE-EEET---TCCEEEEETTTCCE
T ss_pred CEEE-EEeC---CCeEEEEECCCCCE
Confidence 5544 4433 35788899877763
No 148
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.31 E-value=9.7e-05 Score=74.50 Aligned_cols=162 Identities=15% Similarity=0.165 Sum_probs=102.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
.|.+.++.|||++...++|+++++++ +..+.+.... ......+++++.++.|++. +.. ...|+++++
T Consensus 79 ~~d~~~~~ly~~D~~~~~I~r~~~~g--~~~~~~~~~~---~~~p~glavd~~~g~ly~~-d~~-------~~~I~~~~~ 145 (349)
T 3v64_C 79 DFHHRRELVFWSDVTLDRILRANLNG--SNVEEVVSTG---LESPGGLAVDWVHDKLYWT-DSG-------TSRIEVANL 145 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTS--CSCEEEECSS---CSCCCEEEEETTTTEEEEE-ETT-------TTEEEEEET
T ss_pred EEeccccEEEEEeccCCceEEEecCC--CCceEEEeCC---CCCccEEEEecCCCeEEEE-cCC-------CCeEEEEcC
Confidence 45555779999988888999999997 5555543320 1123456788888887665 321 247999999
Q ss_pred CCCCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 229 NGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 229 ~~g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
++.. .+.+... ...-...+++|++..|+|..+.. ...|+.+++++ . ..+.+.... - .....+.
T Consensus 146 dG~~---~~~l~~~~l~~P~~iavdp~~g~ly~td~~~------~~~I~r~~~dG--~--~~~~~~~~~-~--~~PnGla 209 (349)
T 3v64_C 146 DGAH---RKVLLWQSLEKPRAIALHPMEGTIYWTDWGN------TPRIEASSMDG--S--GRRIIADTH-L--FWPNGLT 209 (349)
T ss_dssp TSCS---CEEEECTTCSCEEEEEEETTTTEEEEEECSS------SCEEEEEETTS--C--SCEESCCSS-C--SCEEEEE
T ss_pred CCCc---eEEEEeCCCCCcceEEEecCcCeEEEeccCC------CCEEEEEeCCC--C--CcEEEEECC-C--CCcceEE
Confidence 9876 5655532 22334567899888888776432 26799999873 2 123332211 1 2345678
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
++|++..+|++|. +...|+++++++...+.+.
T Consensus 210 ~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~ 241 (349)
T 3v64_C 210 IDYAGRRMYWVDA--KHHVIERANLDGSHRKAVI 241 (349)
T ss_dssp EETTTTEEEEEET--TTTEEEEEETTSCSCEEEE
T ss_pred EeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEE
Confidence 9988774444554 2347999998765544443
No 149
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.30 E-value=0.00049 Score=74.04 Aligned_cols=249 Identities=10% Similarity=0.022 Sum_probs=135.3
Q ss_pred eeE----EECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCC---CC-----CCceecceeeCCCCCEEEEEEeccCCCC
Q 008927 149 AFR----IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY---GE-----PLVSYADGIFDPRFNRYVTVREDRRQDA 216 (548)
Q Consensus 149 ~~~----~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~---~~-----~~~~~~~~~~SpDG~~i~~v~~~~~~~~ 216 (548)
.++ |||++++..+...++|.++|..+ .++....+.. .+ +..+...+..|+++..+++...+
T Consensus 246 a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t--~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~----- 318 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYWPPQYVIMDGET--LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE----- 318 (567)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTT--CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT-----
T ss_pred EEccccCCCCCEEEEEEccCCeEEEEECCC--CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC-----
Confidence 567 57888888887778999999876 5553321110 00 01245566788888765443221
Q ss_pred CCceeEEEEEECCCCCccCcEEee--ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEc-
Q 008927 217 LNSTTEIVAIALNGQNIQEPKVLV--SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA- 293 (548)
Q Consensus 217 ~~~~~~l~~idl~~g~~~~~~~L~--~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~- 293 (548)
...|+++|....+ ...++ ....+.....|+|||++++ ++... ...|.++|.+. +++.. ..-.
T Consensus 319 ---~g~v~~vd~~~~~---~~~v~~i~~~~~~~d~~~~pdgr~~~-va~~~------sn~V~ViD~~t-~kl~~-~i~vg 383 (567)
T 1qks_A 319 ---TGKILLVDYTDLN---NLKTTEISAERFLHDGGLDGSHRYFI-TAANA------RNKLVVIDTKE-GKLVA-IEDTG 383 (567)
T ss_dssp ---TTEEEEEETTCSS---EEEEEEEECCSSEEEEEECTTSCEEE-EEEGG------GTEEEEEETTT-TEEEE-EEECS
T ss_pred ---CCeEEEEecCCCc---cceeeeeeccccccCceECCCCCEEE-EEeCC------CCeEEEEECCC-CcEEE-EEecc
Confidence 2589999987754 22221 1223444567999999875 44232 45799999984 55322 2222
Q ss_pred CCCCCcccCCcCce-ECcCCc-EEEEEeCCCCeeeEEEEeccCC-------ee-EeecccccccCCCcccccCcceeeee
Q 008927 294 GFDPTIVESPTEPK-WSSKGE-LFFVTDRKNGFWNLHKWIESNN-------EV-LAIYSLDAEFSRPLWVFGINSYEIIQ 363 (548)
Q Consensus 294 ~~~~~~~~~~~~~~-wspDG~-L~~~sd~~~g~~~Ly~~d~~~g-------~~-~~l~~~~~d~~~p~w~~~~~~~~~~~ 363 (548)
+.. . ..-..+. +.||+. +|+++.. |...|-+++.+++ ++ +.+. ... ..+.+ ....
T Consensus 384 g~~-P--hpg~g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~~~~~~~~~kvv~~i~-~~g--~g~~~------i~~~- 448 (567)
T 1qks_A 384 GQT-P--HPGRGANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFP-ALG--GGSLF------IKTH- 448 (567)
T ss_dssp SSS-B--CCTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEE-CSC--SCCCC------EECC-
T ss_pred CcC-C--CCccceeeECCCCCcEEEeCCC--CCCeEEEecCCCCCCccccCEEEEEEe-cCC--CCCEE------EEeC-
Confidence 211 0 1112233 478867 7665554 3335777776552 22 2221 110 11111 1122
Q ss_pred ecCCCCEEEEEEEeCC----eEEEEEEECCCC-----c--eEeec------CC--CceeEe--eeecCCEEEEEEec-CC
Q 008927 364 SHGEKNLIACSYRQNG----RSYLGILDDFGH-----S--LSLLD------IP--FTDIDN--ITLGNDCLFVEGAS-GV 421 (548)
Q Consensus 364 ~~~d~~~l~~~~~~~g----~~~L~~~dl~~g-----~--~~~l~------~~--~~~~~~--~s~d~~~l~~~~ss-~~ 421 (548)
++++.+++....+. ...|.++|+++. . .+.|. .+ ...+.. ++++|+++++..-+ ..
T Consensus 449 --p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~ 526 (567)
T 1qks_A 449 --PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKD 526 (567)
T ss_dssp --TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTT
T ss_pred --CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCC
Confidence 27777765432111 347888887655 1 13332 11 112222 37899999887532 33
Q ss_pred CCCeEEEEEcCCCce
Q 008927 422 EPSSVAKVTLDDHKL 436 (548)
Q Consensus 422 ~p~~l~~~d~~~~~~ 436 (548)
....|.++|.+++++
T Consensus 527 ~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 527 QESALVVVDDKTLEL 541 (567)
T ss_dssp SCCEEEEEETTTTEE
T ss_pred CCCcEEEEECCCceE
Confidence 568999999888764
No 150
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.29 E-value=2.6e-05 Score=78.72 Aligned_cols=192 Identities=9% Similarity=-0.036 Sum_probs=110.4
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|++++..|+- ...++.|.+.++.. ++. ..+... ...+....|+|+++.+++..... ..|.++|
T Consensus 146 ~~spdg~~l~s-gs~dg~v~iwd~~~--~~~~~~~~~h----~~~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd 210 (357)
T 4g56_B 146 SVFSDGTQAVS-GGKDFSVKVWDLSQ--KAVLKSYNAH----SSEVNCVAACPGKDTIFLSCGED--------GRILLWD 210 (357)
T ss_dssp EECSSSSEEEE-EETTSCEEEEETTT--TEEEEEECCC----SSCEEEEEECTTCSSCEEEEETT--------SCEEECC
T ss_pred EECCCCCEEEE-EeCCCeEEEEECCC--CcEEEEEcCC----CCCEEEEEEccCCCceeeeeccC--------CceEEEE
Confidence 56677776654 34567788888876 433 333322 22355678999987554433321 2577889
Q ss_pred CCCCCccCcEE-ee--ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 228 LNGQNIQEPKV-LV--SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 228 l~~g~~~~~~~-L~--~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
+.+++ ... +. ..........|+||+..++..... ...|.+.|+.. ++ ....+.+.. ..+.
T Consensus 211 ~~~~~---~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~-------d~~i~~wd~~~-~~--~~~~~~~~~----~~v~ 273 (357)
T 4g56_B 211 TRKPK---PATRIDFCASDTIPTSVTWHPEKDDTFACGDE-------TGNVSLVNIKN-PD--SAQTSAVHS----QNIT 273 (357)
T ss_dssp TTSSS---CBCBCCCTTCCSCEEEEEECTTSTTEEEEEES-------SSCEEEEESSC-GG--GCEEECCCS----SCEE
T ss_pred CCCCc---eeeeeeeccccccccchhhhhcccceEEEeec-------ccceeEEECCC-Cc--EeEEEeccc----eeEE
Confidence 98876 322 22 122335567899997655434321 34688889874 43 234454433 4577
Q ss_pred CceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEE
Q 008927 305 EPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (548)
Q Consensus 305 ~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L 383 (548)
...|+|||+ +++.... ++ .|.++|+++++...... ...++ ...+|.| .++.++++...++.-.+
T Consensus 274 ~l~~sp~~~~~lasgs~-D~--~i~iwd~~~~~~~~~~~------H~~~V---~~vafsP---~d~~~l~s~s~Dg~v~i 338 (357)
T 4g56_B 274 GLAYSYHSSPFLASISE-DC--TVAVLDADFSEVFRDLS------HRDFV---TGVAWSP---LDHSKFTTVGWDHKVLH 338 (357)
T ss_dssp EEEECSSSSCCEEEEET-TS--CEEEECTTSCEEEEECC------CSSCE---EEEEECS---SSTTEEEEEETTSCEEE
T ss_pred EEEEcCCCCCEEEEEeC-CC--EEEEEECCCCcEeEECC------CCCCE---EEEEEeC---CCCCEEEEEcCCCeEEE
Confidence 889999986 6555443 34 46777888887654431 11111 2245553 33445556666776666
Q ss_pred EEEE
Q 008927 384 GILD 387 (548)
Q Consensus 384 ~~~d 387 (548)
|-++
T Consensus 339 W~~~ 342 (357)
T 4g56_B 339 HHLP 342 (357)
T ss_dssp EECC
T ss_pred EECC
Confidence 5443
No 151
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=98.29 E-value=6.3e-07 Score=97.80 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=56.5
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc----cc-Ccc----ChHHHHHHhcCcEEEEeC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE----AR-GIL----NLSIQYWTSRGWAFVDVN 531 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~----~~-~~~----~~~~Q~~asrGyaVl~~N 531 (548)
.+.+++++. ||.+|++++|.|.+ .+++|+||++||-.... +. ..| ....|+|+++||+|+.+|
T Consensus 25 ~~~v~i~~~-DG~~L~~~~~~P~~-------~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 25 KREVMIPMR-DGVKLHTVIVLPKG-------AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp EEEEEEECT-TSCEEEEEEEEETT-------CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred EEEEEEECC-CCCEEEEEEEeCCC-------CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 467899998 99999999999964 25789999999633221 11 111 111299999999999999
Q ss_pred CCCCCCCChhhhh
Q 008927 532 YGGSTGLSSVPST 544 (548)
Q Consensus 532 yRGStGyG~~f~~ 544 (548)
+||+.+++..|..
T Consensus 97 ~RG~g~S~g~~~~ 109 (615)
T 1mpx_A 97 VRGKYGSEGDYVM 109 (615)
T ss_dssp CTTSTTCCSCCCT
T ss_pred CCCCCCCCCcccc
Confidence 9999888776643
No 152
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.28 E-value=0.00011 Score=72.86 Aligned_cols=202 Identities=11% Similarity=0.094 Sum_probs=114.4
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCC--CCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~--~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
.|.++++.|||++...+.|+++++++.. ...+.+.... ......+++++.++.|++. +.. ...|.++
T Consensus 36 ~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~---~~~p~glavd~~~~~ly~~-d~~-------~~~I~~~ 104 (316)
T 1ijq_A 36 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---IQAPDGLAVDWIHSNIYWT-DSV-------LGTVSVA 104 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS---CSCCCEEEEETTTTEEEEE-ETT-------TTEEEEE
T ss_pred EEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC---CCCcCEEEEeecCCeEEEE-ECC-------CCEEEEE
Confidence 4555577999999888899999997510 1223332210 1123456778777777664 322 2579999
Q ss_pred ECCCCCccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 227 ALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 227 dl~~g~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
++++.. .+.+.. ....-...+++|++.+|+|..+.. ...|+.++++ |.. .+.+.... - .....
T Consensus 105 ~~~g~~---~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------~~~I~~~~~d--G~~--~~~~~~~~-~--~~P~g 168 (316)
T 1ijq_A 105 DTKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLN--GVD--IYSLVTEN-I--QWPNG 168 (316)
T ss_dssp ETTSSS---EEEEEECTTCCEEEEEEETTTTEEEEEECSS------SCEEEEEETT--SCC--EEEEECSS-C--SCEEE
T ss_pred eCCCCc---eEEEEECCCCCcceEEeCCCCCEEEEEccCC------CCeEEEEcCC--CCC--eEEEEECC-C--CCceE
Confidence 998876 555554 223334567899888888776431 2579999986 331 22232211 0 33456
Q ss_pred ceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 306 ~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
+.|+++++.+|.+|. +...|+++++++...+.+.........| .+ .+. +++.||++. -+...|++
T Consensus 169 la~d~~~~~lY~~D~--~~~~I~~~d~dg~~~~~~~~~~~~~~~P---~g---iav-----~~~~ly~~d--~~~~~V~~ 233 (316)
T 1ijq_A 169 ITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP---FS---LAV-----FEDKVFWTD--IINEAIFS 233 (316)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSE---EE---EEE-----ETTEEEEEE--TTTTEEEE
T ss_pred EEEeccCCEEEEEEC--CCCeEEEEecCCCceEEEeecCCccCCc---EE---EEE-----ECCEEEEEE--CCCCeEEE
Confidence 789998774445554 2347999998765555443211111111 11 223 346676643 33456777
Q ss_pred EECCCCc
Q 008927 386 LDDFGHS 392 (548)
Q Consensus 386 ~dl~~g~ 392 (548)
++..+|+
T Consensus 234 ~~~~~g~ 240 (316)
T 1ijq_A 234 ANRLTGS 240 (316)
T ss_dssp EETTTCC
T ss_pred EeCCCCc
Confidence 7765553
No 153
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=98.26 E-value=1.5e-06 Score=80.17 Aligned_cols=69 Identities=16% Similarity=0.113 Sum_probs=54.1
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc---CccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR---GILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~---~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
.+|.+++++. || +++++++.|.+ .++.|+||++||+|..... ..|....+.|+++||.|+.+|+||..
T Consensus 5 ~~~~~~~~~~-~g-~l~~~~~~p~~-------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g 75 (208)
T 3trd_A 5 TNEDFLIQGP-VG-QLEVMITRPKG-------IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVG 75 (208)
T ss_dssp SSSCEEEECS-SS-EEEEEEECCSS-------CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTST
T ss_pred ccceEEEECC-Cc-eEEEEEEcCCC-------CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCC
Confidence 4678899998 99 99999999953 2357999999998743322 22445678899999999999999865
Q ss_pred C
Q 008927 537 G 537 (548)
Q Consensus 537 G 537 (548)
.
T Consensus 76 ~ 76 (208)
T 3trd_A 76 K 76 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 154
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.26 E-value=6.5e-06 Score=83.14 Aligned_cols=156 Identities=13% Similarity=0.062 Sum_probs=84.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+++++.|+... .++.|.+.++.+ +..+.+..... ....+..+.|+|||+.|+....+ ..|.++|+
T Consensus 18 ~~s~~g~~l~~~~-~d~~i~iw~~~~--~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d---------~~v~vwd~ 84 (377)
T 3dwl_C 18 AFNSQRTEFVTTT-ATNQVELYEQDG--NGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCSQD---------RNAYVYEK 84 (377)
T ss_dssp EECSSSSEEECCC-SSSCBCEEEEET--TEEEECCCBCC-CSSCEEEEEECTTTCCEEEEETT---------SSEEEC--
T ss_pred EECCCCCEEEEec-CCCEEEEEEccC--CceEEEEEEec-CCceEEEEEEeCCCCEEEEEeCC---------CeEEEEEc
Confidence 5777777666543 455555556554 42233322211 12346678899999988776433 24777777
Q ss_pred CCCC-ccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC-CCCCcccCCcCc
Q 008927 229 NGQN-IQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FDPTIVESPTEP 306 (548)
Q Consensus 229 ~~g~-~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~-~~~~~~~~~~~~ 306 (548)
.+++ ......+......+....|+|||+.|+.... ...|.+.+++....+.....+.. .. ..+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~~~~~~~~~~~~~~h~----~~v~~~ 152 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG--------ARVISVCYFEQENDWWVSKHLKRPLR----STILSL 152 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEES--------SSCEEECCC-----CCCCEEECSSCC----SCEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEec--------CCeEEEEEECCcccceeeeEeecccC----CCeEEE
Confidence 7654 1112333344445677899999999886552 24577778774321111334443 22 567889
Q ss_pred eECcCCcEEEEEeCCCCeeeEEEE
Q 008927 307 KWSSKGELFFVTDRKNGFWNLHKW 330 (548)
Q Consensus 307 ~wspDG~L~~~sd~~~g~~~Ly~~ 330 (548)
.|+|||++++.... ++.-.||-+
T Consensus 153 ~~~~~~~~l~~~~~-d~~i~iwd~ 175 (377)
T 3dwl_C 153 DWHPNNVLLAAGCA-DRKAYVLSA 175 (377)
T ss_dssp EECTTSSEEEEEES-SSCEEEEEE
T ss_pred EEcCCCCEEEEEeC-CCEEEEEEE
Confidence 99999995555444 454444433
No 155
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.26 E-value=0.00016 Score=72.04 Aligned_cols=210 Identities=10% Similarity=-0.032 Sum_probs=110.7
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCC-CceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEP-LVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~-~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
++++ ++|+.++..++.|+++|+.+ ++.. .+....... ......+.+ ++++|+. .... ....|.++|
T Consensus 91 ~~~~-g~lyv~~~~~~~v~~iD~~t--~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv-~~~~------~~~~v~viD 158 (328)
T 3dsm_A 91 FLSD-EKAYVTQIWDYRIFIINPKT--YEITGYIECPDMDMESGSTEQMVQ--YGKYVYV-NCWS------YQNRILKID 158 (328)
T ss_dssp EEET-TEEEEEEBSCSEEEEEETTT--TEEEEEEECTTCCTTTCBCCCEEE--ETTEEEE-EECT------TCCEEEEEE
T ss_pred EeCC-CeEEEEECCCCeEEEEECCC--CeEEEEEEcCCccccCCCcceEEE--ECCEEEE-EcCC------CCCEEEEEE
Confidence 3344 47777664678999999986 4433 333221000 002223445 5666544 3321 125799999
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCC-CCCC--CCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHP-NMPW--DKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~-~~p~--~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
+++++. .+.+..+. .-....++|||+ |++...... ..+| +...|+++|.++ +++.....+... ....
T Consensus 159 ~~t~~~--~~~i~~g~-~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g-----~~p~ 228 (328)
T 3dsm_A 159 TETDKV--VDELTIGI-QPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLG-----DWPS 228 (328)
T ss_dssp TTTTEE--EEEEECSS-CBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTT-----CCCE
T ss_pred CCCCeE--EEEEEcCC-CccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCC-----CCce
Confidence 999872 22333222 223457899997 544443211 1111 126799999873 553222222211 2456
Q ss_pred CceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEe--CCeEE
Q 008927 305 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQ--NGRSY 382 (548)
Q Consensus 305 ~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~--~g~~~ 382 (548)
.+.++|||+.+|+++. .|+++|++++++............| ..+.+.| +++.||++... .+...
T Consensus 229 ~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~~~~~~p------~gi~vdp---~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLEFRDTKY------YGLTVNP---NNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp EEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBCCCSSCE------EEEEECT---TTCCEEEEECTTSSSEEE
T ss_pred eEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeecCCCCce------EEEEEcC---CCCeEEEEcccccccCCE
Confidence 7899999995556553 7999999887753111000000111 1134432 46677655311 24567
Q ss_pred EEEEECCCCc-eEee
Q 008927 383 LGILDDFGHS-LSLL 396 (548)
Q Consensus 383 L~~~dl~~g~-~~~l 396 (548)
|+++|++ |+ +..+
T Consensus 295 V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 295 VYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEEECTT-CCEEEEE
T ss_pred EEEECCC-CCEEEEE
Confidence 8999987 54 3344
No 156
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.25 E-value=0.0001 Score=73.75 Aligned_cols=202 Identities=9% Similarity=0.044 Sum_probs=111.5
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCC
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~ 271 (548)
.+..+.|+|||+.|++...+ ..|.++|+.+++......+......+....|+|||+.|+....
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d---------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-------- 72 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNN---------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-------- 72 (372)
T ss_dssp CCCEEEECTTSSEEEEECSS---------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET--------
T ss_pred CeEEEEECCCCCEEEEEeCC---------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC--------
Confidence 35667899999987765322 4688888888740004444444455677899999998885542
Q ss_pred CceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCee----Eeeccccccc
Q 008927 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV----LAIYSLDAEF 347 (548)
Q Consensus 272 ~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~----~~l~~~~~d~ 347 (548)
...|.+.+++. ++......+.... ..+....|+|||+++++... +|.-.+|.++ .++. ..+... .
T Consensus 73 dg~i~vwd~~~-~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-d~~v~i~d~~--~~~~~~~~~~~~~~---~ 141 (372)
T 1k8k_C 73 DRNAYVWTLKG-RTWKPTLVILRIN----RAARCVRWAPNEKKFAVGSG-SRVISICYFE--QENDWWVCKHIKKP---I 141 (372)
T ss_dssp TSCEEEEEEET-TEEEEEEECCCCS----SCEEEEEECTTSSEEEEEET-TSSEEEEEEE--TTTTEEEEEEECTT---C
T ss_pred CCeEEEEECCC-CeeeeeEEeecCC----CceeEEEECCCCCEEEEEeC-CCEEEEEEec--CCCcceeeeeeecc---c
Confidence 24688888874 4422222223322 45778899999995555544 5555555444 4431 222110 0
Q ss_pred CCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC------------------CCce-EeecCCCceeEee--
Q 008927 348 SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF------------------GHSL-SLLDIPFTDIDNI-- 406 (548)
Q Consensus 348 ~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~------------------~g~~-~~l~~~~~~~~~~-- 406 (548)
.. ......|.| +++.|+ +...++.- +++|+. .++. ..+......+..+
T Consensus 142 ~~-----~i~~~~~~~---~~~~l~-~~~~dg~i--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 210 (372)
T 1k8k_C 142 RS-----TVLSLDWHP---NSVLLA-AGSCDFKC--RIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF 210 (372)
T ss_dssp CS-----CEEEEEECT---TSSEEE-EEETTSCE--EEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE
T ss_pred CC-----CeeEEEEcC---CCCEEE-EEcCCCCE--EEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE
Confidence 11 112244553 555444 44555554 455532 3332 2333222334444
Q ss_pred eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 407 TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 407 s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+++++.++... . ...|.++|+.+++.
T Consensus 211 ~~~~~~l~~~~-~---d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 211 SANGSRVAWVS-H---DSTVCLADADKKMA 236 (372)
T ss_dssp CSSSSEEEEEE-T---TTEEEEEEGGGTTE
T ss_pred CCCCCEEEEEe-C---CCEEEEEECCCCce
Confidence 56666554433 2 35788899877653
No 157
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.25 E-value=0.00012 Score=72.72 Aligned_cols=197 Identities=12% Similarity=0.132 Sum_probs=118.4
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCC-ce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSS-PL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~-~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
.|.+.++.|||++...++|+++++++ +. .+ .+.... .....+++++.+..|++. +.. ...|.++
T Consensus 41 d~d~~~~~lyw~D~~~~~I~r~~~~g--~~~~~~~~~~~l----~~p~glavd~~~g~ly~~-d~~-------~~~I~~~ 106 (318)
T 3sov_A 41 DFVFSHGLIYWSDVSEEAIKRTEFNK--TESVQNVVVSGL----LSPDGLACDWLGEKLYWT-DSE-------TNRIEVS 106 (318)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEETTS--SSCCCEEEEECC----SCCCEEEEETTTTEEEEE-ETT-------TTEEEEE
T ss_pred EEEeCCCEEEEEECCCCcEEEEEccC--CCceEEEEcCCC----CCccEEEEEcCCCeEEEE-ECC-------CCEEEEE
Confidence 45555789999998888999999987 42 12 222210 123356788877777664 321 2579999
Q ss_pred ECCCCCccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 227 ALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 227 dl~~g~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
++++.. .+.+.. ....-...++.|++.+|+|..|. ....|+.+++++ .. ...++...- .....
T Consensus 107 ~~dG~~---~~~l~~~~~~~P~giavdp~~g~ly~td~~------~~~~I~r~~~dG--~~-~~~~~~~~l----~~Png 170 (318)
T 3sov_A 107 NLDGSL---RKVLFWQELDQPRAIALDPSSGFMYWTDWG------EVPKIERAGMDG--SS-RFIIINSEI----YWPNG 170 (318)
T ss_dssp ETTSCS---CEEEECSSCSSEEEEEEEGGGTEEEEEECS------SSCEEEEEETTS--CS-CEEEECSSC----SCEEE
T ss_pred ECCCCc---EEEEEeCCCCCccEEEEeCCCCEEEEEecC------CCCEEEEEEcCC--CC-eEEEEECCC----CCccE
Confidence 999876 566642 22233456788888888877643 146799999863 21 122333221 33456
Q ss_pred ceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 306 PKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 306 ~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
+.|+++++.+|.+|. +...|+++++++...+.+... ....| .+ .+. +++.||++- -+...|++
T Consensus 171 lavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~--~~~~P---~g---lav-----~~~~lywtd--~~~~~V~~ 233 (318)
T 3sov_A 171 LTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKG--SLPHP---FA---LTL-----FEDILYWTD--WSTHSILA 233 (318)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECS--CCSCE---EE---EEE-----ETTEEEEEE--TTTTEEEE
T ss_pred EEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecC--CCCCc---eE---EEE-----eCCEEEEEe--cCCCeEEE
Confidence 889998774444554 335799999876555555421 11222 11 222 456777762 34456888
Q ss_pred EECCCCc
Q 008927 386 LDDFGHS 392 (548)
Q Consensus 386 ~dl~~g~ 392 (548)
++..+|+
T Consensus 234 ~~~~~G~ 240 (318)
T 3sov_A 234 CNKYTGE 240 (318)
T ss_dssp EETTTCC
T ss_pred EECCCCC
Confidence 8886664
No 158
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.25 E-value=0.00056 Score=80.51 Aligned_cols=202 Identities=9% Similarity=0.018 Sum_probs=115.8
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECC-EEEEEeCCCCe
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGD-TVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~-~i~F~~~~~~~ 166 (548)
..+..+.++| |+.++-.. .+|...||..... .....+......+. .-.|+++++ .++.+...++.
T Consensus 658 ~~v~~~~~s~~~~~l~s~~----~d~~v~vwd~~~~--~~~~~~~~~~~~v~-------~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCS----ADKKVKIWDSATG--KLVHTYDEHSEQVN-------CCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEE----TTSEEEEEETTTC--CEEEEEECCSSCEE-------EEEECSSSSCCEEEEEETTSC
T ss_pred CCEEEEEEecCCCEEEEEe----CCCeEEEEECCCC--ceEEEEcCCCCcEE-------EEEEecCCCceEEEEEeCCCe
Confidence 4566788888 66555433 2466667765332 11222222111111 124555433 45555556788
Q ss_pred EEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeec---
Q 008927 167 LYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSG--- 242 (548)
Q Consensus 167 Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~--- 242 (548)
|.+.++.. ++.. .+... ...+..+.|+|||+.|+....+ ..|.++|+.+++. ...+...
T Consensus 725 v~vwd~~~--~~~~~~~~~h----~~~v~~~~~sp~~~~l~s~s~d---------g~v~vwd~~~~~~--~~~~~~~~~~ 787 (1249)
T 3sfz_A 725 LKLWDLNQ--KECRNTMFGH----TNSVNHCRFSPDDELLASCSAD---------GTLRLWDVRSANE--RKSINVKRFF 787 (1249)
T ss_dssp EEEEETTS--SSEEEEECCC----SSCEEEEEECSSTTEEEEEESS---------SEEEEEEGGGTEE--EEEEECCCCC
T ss_pred EEEEECCC--cchhheecCC----CCCEEEEEEecCCCEEEEEECC---------CeEEEEeCCCCcc--cceecccccc
Confidence 88888876 4433 33332 2346677899999988776443 3688888887751 1122110
Q ss_pred ----------CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 243 ----------SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 243 ----------~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
........|||||+.|+... ...+++.++..++.+ .....+.. ..+....|+|+|
T Consensus 788 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~---------~~~v~~~d~~~~~~~--~~~~~~~~----~~v~~~~~sp~~ 852 (1249)
T 3sfz_A 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAA---------KNKVLLFDIHTSGLL--AEIHTGHH----STIQYCDFSPYD 852 (1249)
T ss_dssp --------CCCCCBCCCCBCTTSSEEEEEE---------TTEEEEEETTTCCEE--EEEECSSS----SCCCEEEECSST
T ss_pred cccCCccccccceEEEEEECCCCCEEEEEc---------CCcEEEEEecCCCce--eEEcCCCC----CceEEEEEcCCC
Confidence 11234557999999988654 246888898853321 12222332 567889999999
Q ss_pred cEEEEEeCCCCeeeEEEEeccCCeeE
Q 008927 313 ELFFVTDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 313 ~L~~~sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
+++++... +| .+..++..+++..
T Consensus 853 ~~l~~~~~-dg--~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 853 HLAVIALS-QY--CVELWNIDSRLKV 875 (1249)
T ss_dssp TEEEEECS-SS--CEEEEETTTTEEE
T ss_pred CEEEEEeC-CC--eEEEEEcCCCcee
Confidence 96555544 44 4666677676543
No 159
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=98.23 E-value=1.8e-06 Score=86.12 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=54.3
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccChHHHHHHh-cCcEEEEeCCCCCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWTS-RGWAFVDVNYGGSTGLS 539 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~~~~Q~~as-rGyaVl~~NyRGStGyG 539 (548)
+.+++++. || +|++++|.|.+ ...|+||++|||+... ....+....+.|++ +||+|+.+|||++.++.
T Consensus 64 ~~~~~~~~-~g-~i~~~~~~p~~--------~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~ 133 (326)
T 3ga7_A 64 RTCAVPTP-YG-DVTTRLYSPQP--------TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR 133 (326)
T ss_dssp EEEEECCT-TS-CEEEEEEESSS--------SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred EEEEeecC-CC-CeEEEEEeCCC--------CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 88999997 88 89999999963 1239999999998543 23345556778888 89999999999988754
No 160
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.22 E-value=0.0013 Score=64.76 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=113.6
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCC--CC-CcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAG--DE-PSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~--~~-~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~ 164 (548)
..+..+.++| +..++..... ++...||....... +. .+.+......+. .-.|++++..|+ +...+
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-------~~~~s~dg~~l~-s~s~D 86 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASR---DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-------DCTLTADGAYAL-SASWD 86 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEET---TSEEEEEEEEEETTEEEEEEEEEECCSSCEE-------EEEECTTSSEEE-EEETT
T ss_pred ceEEEEEccCCCccEEEEecC---CccEEEecCCCCCccccccceEEeCCcccEE-------EEEECCCCCEEE-EEeCC
Confidence 4566678888 5566555443 57777776643200 00 011111111110 124555565544 44467
Q ss_pred CeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecC
Q 008927 165 QRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS 243 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~ 243 (548)
+.|.+.++.. ++. +.+... ...+....|+|+++.|+....+ ..|.++|+.+.. ...+....
T Consensus 87 ~~v~~wd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D---------~~i~vwd~~~~~---~~~~~~h~ 148 (319)
T 3frx_A 87 KTLRLWDVAT--GETYQRFVGH----KSDVMSVDIDKKASMIISGSRD---------KTIKVWTIKGQC---LATLLGHN 148 (319)
T ss_dssp SEEEEEETTT--TEEEEEEECC----SSCEEEEEECTTSCEEEEEETT---------SCEEEEETTSCE---EEEECCCS
T ss_pred CEEEEEECCC--CCeeEEEccC----CCcEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCe---EEEEeccC
Confidence 7788888876 443 334332 2345667899999987765443 246677887655 45555445
Q ss_pred CceeeeEECCCC------CEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEE
Q 008927 244 DFYAFPRMDPRG------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFV 317 (548)
Q Consensus 244 ~~~~~p~~SPDG------k~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~ 317 (548)
+......|+|++ ..|+-.. . ...|.+.++.. ++ ....+.+.. ..+....|+|||++++.
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~-~-------d~~i~~wd~~~-~~--~~~~~~~h~----~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAG-N-------DKMVKAWNLNQ-FQ--IEADFIGHN----SNINTLTASPDGTLIAS 213 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEE-T-------TSCEEEEETTT-TE--EEEEECCCC----SCEEEEEECTTSSEEEE
T ss_pred CcEEEEEEccCCCCCCCccEEEEEe-C-------CCEEEEEECCc-ch--hheeecCCC----CcEEEEEEcCCCCEEEE
Confidence 556667788854 3554332 1 34578888874 43 123344433 45778899999996665
Q ss_pred EeCCCCeeeEEEEeccCCeeE
Q 008927 318 TDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
... +| .|.++|+.+++..
T Consensus 214 ~~~-dg--~i~iwd~~~~~~~ 231 (319)
T 3frx_A 214 AGK-DG--EIMLWNLAAKKAM 231 (319)
T ss_dssp EET-TC--EEEEEETTTTEEE
T ss_pred EeC-CC--eEEEEECCCCcEE
Confidence 544 44 4666777777643
No 161
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.22 E-value=0.00066 Score=67.32 Aligned_cols=160 Identities=11% Similarity=0.000 Sum_probs=94.3
Q ss_pred CccCceEEcC----CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCC-CCccccceeeCCeeeEEEC---CEEEEE
Q 008927 89 KRLGGTAVDG----HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKE-YAVRTTAQEYGGGAFRIFG---DTVIFS 160 (548)
Q Consensus 89 ~~~~~~~~sp----g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~-~~~r~~v~~ygg~~~~~~~---~~i~F~ 160 (548)
..+..+.++| ++..++.... +++..||..... ...+.+.... ......+. .-+|++++ +.++++
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~---~~~v~vw~~~~~--~~~~~~~~~~~~~~~~~v~---~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVG---SNRVTLYECHSQ--GEIRLLQSYVDADADENFY---TCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEE---TTEEEEEEECGG--GCEEEEEEEECSCTTCCEE---EEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCCCceEEEECC---CCEEEEEEcCCC--cEEEeeeeccccCCCCcEE---EEEeccCCCCCCCEEEE
Confidence 4566777886 4555555432 356667766433 2233332110 00011111 13688874 355666
Q ss_pred eCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE
Q 008927 161 NYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (548)
Q Consensus 161 ~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~ 238 (548)
...++.|.+.++.. ++. ..+... ...+..+.|+| +++.|+....+ ..|.++|+.+++ ...
T Consensus 91 ~~~dg~i~v~d~~~--~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~~---~~~ 152 (366)
T 3k26_A 91 AGSRGIIRIINPIT--MQCIKHYVGH----GNAINELKFHPRDPNLLLSVSKD---------HALRLWNIQTDT---LVA 152 (366)
T ss_dssp EETTCEEEEECTTT--CCEEEEEESC----CSCEEEEEECSSCTTEEEEEETT---------SCEEEEETTTTE---EEE
T ss_pred ecCCCEEEEEEchh--ceEeeeecCC----CCcEEEEEECCCCCCEEEEEeCC---------CeEEEEEeecCe---EEE
Confidence 66778899999876 444 334322 23466788999 88877665433 358888998876 433
Q ss_pred ee----ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecC
Q 008927 239 LV----SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE 282 (548)
Q Consensus 239 L~----~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~ 282 (548)
.. ..........|+|||+.|+.... ...|.+.++..
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------dg~i~i~d~~~ 192 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGM--------DHSLKLWRINS 192 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEET--------TSCEEEEESCS
T ss_pred EecccccccCceeEEEECCCCCEEEEecC--------CCCEEEEECCC
Confidence 32 23345677899999998875542 34688888873
No 162
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.22 E-value=0.00016 Score=72.25 Aligned_cols=239 Identities=10% Similarity=0.070 Sum_probs=125.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|++++..|+... .++.|.+.++..+..+. +.+... ...+..+.|+|+ ++.|+....+ ..|.+
T Consensus 18 ~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~~~d---------g~v~i 83 (379)
T 3jrp_A 18 VLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVLI 83 (379)
T ss_dssp EECSSSSEEEEEE-TTSCEEEEEEETTEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SCEEE
T ss_pred EEcCCCCEEEEEE-CCCcEEEEecCCCcceeeeEecCC----CCcEEEEEeCCCCCCCEEEEeccC---------CEEEE
Confidence 4666777666553 45656665654310222 233332 234567789987 8877665433 24777
Q ss_pred EECCCCCccCcEEeeecCCceeeeEECCC--CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~SPD--Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~ 303 (548)
+|+.+++......+......+....|+|+ |+.|+.... ...|.+.++...... ....+.... ..+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--------d~~i~v~d~~~~~~~-~~~~~~~~~----~~v 150 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS--------DGKVSVVEFKENGTT-SPIIIDAHA----IGV 150 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--------TSEEEEEECCTTSCC-CEEEEECCT----TCE
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC--------CCcEEEEecCCCCce-eeEEecCCC----Cce
Confidence 78877741002233333445677899999 888875542 357889998753221 223343333 457
Q ss_pred cCceECc-------------CCcEEEEEeCCCCeeeEEEEeccCCee--EeecccccccCCCcccccCcceeeeeecCCC
Q 008927 304 TEPKWSS-------------KGELFFVTDRKNGFWNLHKWIESNNEV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGEK 368 (548)
Q Consensus 304 ~~~~wsp-------------DG~L~~~sd~~~g~~~Ly~~d~~~g~~--~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~ 368 (548)
..+.|+| |+++++.... +|. |+.+|+.+++. ..+..... ...+ .....|.| ++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~-h~~~-----v~~~~~sp---~~ 218 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGA-DNL--VKIWKYNSDAQTYVLESTLEG-HSDW-----VRDVAWSP---TV 218 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEET-TSC--EEEEEEETTTTEEEEEEEECC-CSSC-----EEEEEECC---CC
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeC-CCe--EEEEEecCCCcceeeEEEEec-ccCc-----EeEEEECC---CC
Confidence 7889999 6775555544 454 55555544431 11111000 0111 12245554 42
Q ss_pred --CEEEEEEEeCCeEEEEEEECCCCc---eEee-cC--CCceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 369 --NLIACSYRQNGRSYLGILDDFGHS---LSLL-DI--PFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 369 --~~l~~~~~~~g~~~L~~~dl~~g~---~~~l-~~--~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
+.++++...++.-.|| |+.++. ...+ .. ....+..+ +++++.|+.... . ..|+++++.
T Consensus 219 ~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--d--g~i~iw~~~ 286 (379)
T 3jrp_A 219 LLRSYLASVSQDRTCIIW--TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--D--NKVTLWKEN 286 (379)
T ss_dssp SSSEEEEEEETTSCEEEE--EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES--S--SSEEEEEEE
T ss_pred CCCCeEEEEeCCCEEEEE--eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC--C--CcEEEEeCC
Confidence 5566666666765555 554542 2222 22 12234433 677776554433 2 445666554
No 163
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.20 E-value=0.0002 Score=72.82 Aligned_cols=117 Identities=6% Similarity=-0.093 Sum_probs=69.3
Q ss_pred EECCEEEEEeCC----CCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEecc-CCCCCCceeEEEE
Q 008927 152 IFGDTVIFSNYK----DQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVA 225 (548)
Q Consensus 152 ~~~~~i~F~~~~----~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~-~~~~~~~~~~l~~ 225 (548)
|++.+||-.+.. ++.|+++|.+. .+. ..|..+. .- .+.+||||++++....-. +...++..+.|.+
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t--~~v~~~I~vG~-----~P-~va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEA--GRVIGMIDGGF-----LP-NPVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTT--TEEEEEEEECS-----SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCC--CeEEEEEECCC-----CC-cEEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 567777777654 56999999986 443 3343331 12 378999999865543210 0000012357999
Q ss_pred EECCCCCccCcEEeeecC-------CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCc
Q 008927 226 IALNGQNIQEPKVLVSGS-------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD 285 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~-------~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~ 285 (548)
+|..+.+. ...|.-+. ..-....+||||++|+ +.... ....|.++|++. ++
T Consensus 114 iD~~t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~ly-Van~~-----~~~~VsVID~~t-~~ 171 (386)
T 3sjl_D 114 FDPVTLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLL-FYQFS-----PAPAVGVVDLEG-KA 171 (386)
T ss_dssp ECTTTCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEE-EEECS-----SSCEEEEEETTT-TE
T ss_pred EECCCCeE--EEEEECCCccccccCCCCceEEEcCCCCEEE-EEEcC-----CCCeEEEEECCC-Cc
Confidence 99999872 23332221 1123458999999875 55221 135799999984 54
No 164
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.17 E-value=0.00048 Score=75.90 Aligned_cols=192 Identities=15% Similarity=0.124 Sum_probs=109.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|++++..|+ +...++.|.+.++.. +.. +.+... ...+....|+|||+.|+..+.+ ..|.++|
T Consensus 437 ~~s~~g~~l~-sgs~Dg~v~vwd~~~--~~~~~~~~~h----~~~v~~~~~s~~~~~l~s~s~D---------~~i~iwd 500 (694)
T 3dm0_A 437 VLSSDGQFAL-SGSWDGELRLWDLAA--GVSTRRFVGH----TKDVLSVAFSLDNRQIVSASRD---------RTIKLWN 500 (694)
T ss_dssp EECTTSSEEE-EEETTSEEEEEETTT--TEEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SCEEEEC
T ss_pred EECCCCCEEE-EEeCCCcEEEEECCC--CcceeEEeCC----CCCEEEEEEeCCCCEEEEEeCC---------CEEEEEE
Confidence 4555665554 444677888888875 433 344333 2345677899999988765443 2466677
Q ss_pred CCCCCccCcEEeee----cCCceeeeEECCCCC--EEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCccc
Q 008927 228 LNGQNIQEPKVLVS----GSDFYAFPRMDPRGE--RMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (548)
Q Consensus 228 l~~g~~~~~~~L~~----~~~~~~~p~~SPDGk--~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~ 301 (548)
+.+.. ...+.. ..+.+....|+|++. .|+-.+ . ...|.+.|+.. ++. ...+.+.. .
T Consensus 501 ~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~------d~~v~vwd~~~-~~~--~~~~~~h~----~ 562 (694)
T 3dm0_A 501 TLGEC---KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS--W------DKTVKVWNLSN-CKL--RSTLAGHT----G 562 (694)
T ss_dssp TTSCE---EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE--T------TSCEEEEETTT-CCE--EEEECCCS----S
T ss_pred CCCCc---ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe--C------CCeEEEEECCC-CcE--EEEEcCCC----C
Confidence 76553 333322 123456778999984 344222 1 24688889874 432 33444433 4
Q ss_pred CCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeE
Q 008927 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~ 381 (548)
.+....|+|||++++.... +| .|.++|+.+++....... ... .....++| ++ .+++... ++
T Consensus 563 ~v~~v~~spdg~~l~sg~~-Dg--~i~iwd~~~~~~~~~~~~----~~~-----v~~~~~sp---~~-~~l~~~~-~~-- 623 (694)
T 3dm0_A 563 YVSTVAVSPDGSLCASGGK-DG--VVLLWDLAEGKKLYSLEA----NSV-----IHALCFSP---NR-YWLCAAT-EH-- 623 (694)
T ss_dssp CEEEEEECTTSSEEEEEET-TS--BCEEEETTTTEEEECCBC----SSC-----EEEEEECS---SS-SEEEEEE-TT--
T ss_pred CEEEEEEeCCCCEEEEEeC-CC--eEEEEECCCCceEEEecC----CCc-----EEEEEEcC---CC-cEEEEEc-CC--
Confidence 6778899999996655544 44 455667767654322211 111 12245553 44 4444443 33
Q ss_pred EEEEEECCCCce
Q 008927 382 YLGILDDFGHSL 393 (548)
Q Consensus 382 ~L~~~dl~~g~~ 393 (548)
.|.++|+++++.
T Consensus 624 ~i~iwd~~~~~~ 635 (694)
T 3dm0_A 624 GIKIWDLESKSI 635 (694)
T ss_dssp EEEEEETTTTEE
T ss_pred CEEEEECCCCCC
Confidence 277788887754
No 165
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.17 E-value=0.00035 Score=71.88 Aligned_cols=170 Identities=11% Similarity=0.145 Sum_probs=91.7
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE--------eeecCCceeeeEECCCC-CEEEEEE
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV--------LVSGSDFYAFPRMDPRG-ERMAWIE 262 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~--------L~~~~~~~~~p~~SPDG-k~La~~~ 262 (548)
.+..+.|+|||+.|+.. .+ ..|.++|+.++.. ... +......+....|+||| +.|+...
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d---------~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DD---------LRINLWHLEITDR--SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CS---------SEEEEEETTEEEE--EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEEcCCCCEEEEe-CC---------CeEEEEECCCCCc--eeeeeecccccccccCcceEEEEECCCCCcEEEEEe
Confidence 35567899999987663 32 3688888884320 211 11233446778999999 7776544
Q ss_pred ecCCCCCCCCceEEEEEecCCCce-e-eeEEEcCCCCCccc------------CCcCceECcCCcEEEEEeCCCCeeeEE
Q 008927 263 WHHPNMPWDKAELWVGYISENGDV-Y-KRVCVAGFDPTIVE------------SPTEPKWSSKGELFFVTDRKNGFWNLH 328 (548)
Q Consensus 263 ~~~~~~p~~~~~L~v~~~~~~g~~-~-~~~~l~~~~~~~~~------------~~~~~~wspDG~L~~~sd~~~g~~~Ly 328 (548)
. ...|.+.|+.. ++. . ....+.... . .+..+.|+|||++++.... ..|.
T Consensus 247 ~--------dg~i~iwd~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----~~v~ 309 (447)
T 3dw8_B 247 S--------KGTIRLCDMRA-SALCDRHSKLFEEPE----DPSNRSFFSEIISSISDVKFSHSGRYMMTRDY----LSVK 309 (447)
T ss_dssp T--------TSCEEEEETTT-CSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEEES----SEEE
T ss_pred C--------CCeEEEEECcC-CccccceeeEeccCC----CccccccccccCceEEEEEECCCCCEEEEeeC----CeEE
Confidence 2 34688889874 331 0 023343322 2 5678899999995554432 3567
Q ss_pred EEeccC-CeeEeecccccccCCC-------cccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEee
Q 008927 329 KWIESN-NEVLAIYSLDAEFSRP-------LWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL 396 (548)
Q Consensus 329 ~~d~~~-g~~~~l~~~~~d~~~p-------~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l 396 (548)
.+|+.. ++.............. .-........|.| +++.| ++...++ .|+++|+.+++...+
T Consensus 310 iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~---~~~~l-~s~s~dg--~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 310 VWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG---SDSVV-MTGSYNN--FFRMFDRNTKRDITL 379 (447)
T ss_dssp EEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT---TSSEE-EEECSTT--EEEEEETTTCCEEEE
T ss_pred EEeCCCCccccceeeccccccccccccccccccccceEEEECC---CCCEE-EEeccCC--EEEEEEcCCCcceee
Confidence 777754 4432111110000000 0000011145654 66655 4444455 466778888776543
No 166
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.17 E-value=0.00081 Score=69.05 Aligned_cols=240 Identities=8% Similarity=0.035 Sum_probs=129.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+. ++.|+... ++.||+-+..+ ++..++....+ ....+..+.|+|||+.|+....+ ..|.++|+
T Consensus 112 ~wS~-~n~lAvgl--d~tV~lWd~~t--g~~~~~~~~~~-~~~~V~sv~fspdg~~lasgs~D---------g~v~iWd~ 176 (420)
T 4gga_A 112 DWSS-GNVLAVAL--DNSVYLWSASS--GDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSS---------AEVQLWDV 176 (420)
T ss_dssp EECT-TSEEEEEE--TTEEEEEETTT--CCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETT---------SCEEEEET
T ss_pred EECC-CCEEEEEe--CCEEEEEECCC--CCEEEEEEecC-CCCcEEEEEECCCCCEEEEEECC---------CeEEEEEc
Confidence 4553 34566555 66788889887 66654432211 12346778899999988765433 35788899
Q ss_pred CCCCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 229 NGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 229 ~~g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
.+++ ......+ ..... .+++|++.|+-.. . ...+++.+...... ....+.+.. ..+....
T Consensus 177 ~~~~---~~~~~~~h~~~v~--~~s~~~~~l~sgs-~-------d~~i~~~d~~~~~~--~~~~~~~h~----~~~~~~~ 237 (420)
T 4gga_A 177 QQQK---RLRNMTSHSARVG--SLSWNSYILSSGS-R-------SGHIHHHDVRVAEH--HVATLSGHS----QEVCGLR 237 (420)
T ss_dssp TTTE---EEEEECCCSSCEE--EEEEETTEEEEEE-T-------TSEEEEEETTSSSC--EEEEEECCS----SCEEEEE
T ss_pred CCCc---EEEEEeCCCCceE--EEeeCCCEEEEEe-C-------CCceeEeeecccce--eeEEecccc----cceeeee
Confidence 8886 3333322 22233 4566788776433 1 34677777764222 233344433 4566788
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeE--eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVL--AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~--~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
|+|+|++++.... ++. +..++..+++.. .+... .....+ .....|.| .+..++++..-.....|.+
T Consensus 238 ~~~~g~~l~s~~~-D~~--v~i~~~~~~~~~~~~~~~~-~~~~~~-----V~~~~~~p---~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 238 WAPDGRHLASGGN-DNL--VNVWPSAPGEGGWVPLQTF-TQHQGA-----VKAVAWCP---WQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp ECTTSSEEEEEET-TSC--EEEEESSCCSSCSCCSEEE-CCCSSC-----EEEEEECT---TCTTEEEEEECTTTCEEEE
T ss_pred ecCCCCeeeeeec-ccc--ceEEeeccccccceeeeee-cccCCc-----eeeeeeCC---CcccEEEEEeecCCCEEEE
Confidence 9999995555443 443 444555444321 11100 000111 11233443 4555655544222345777
Q ss_pred EECCCCceEe-ecCCCceeEee-eecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 386 LDDFGHSLSL-LDIPFTDIDNI-TLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 386 ~dl~~g~~~~-l~~~~~~~~~~-s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
.|+.+++... +.......... +++++.++..... ....|+++|..+++.
T Consensus 306 wd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~--~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 306 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF--AQNQLVIWKYPTMAK 356 (420)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT--TTCCEEEEETTTCCE
T ss_pred EeCCccccceeeccccceeeeeecCCCCeEEEEEec--CCCEEEEEECCCCcE
Confidence 8988886543 33322222222 6677777655432 235788889877763
No 167
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.17 E-value=0.00055 Score=76.40 Aligned_cols=233 Identities=10% Similarity=0.022 Sum_probs=134.3
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc-c
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI-Q 234 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~-~ 234 (548)
.|+|.+ ...|.++++++ .+...|.... .....+.+++..+.|+++ ... ...|+++++++... .
T Consensus 397 ~Ll~an--~~~Ir~i~l~~--~~~~~l~~~~----~~~~gl~~d~~~~~lY~s-D~~-------~~~I~~~~l~g~~~~~ 460 (791)
T 3m0c_C 397 YLFFTN--RHEVRKMTLDR--SEYTSLIPNL----RNVVALDTEVASNRIYWS-DLS-------QRMICSTQLDRAHGVS 460 (791)
T ss_dssp EEEEEC--BSSEEEECTTS--CCCEEEECSC----SSEEEEEEETTTTEEEEE-ETT-------TTEEEEEEC-------
T ss_pred cccccc--ccceeEeeccC--CcceeeecCC----CceEEEeecccCCeeEEe-ecc-------ceeEEEEeccCCCCCc
Confidence 577776 45699999987 5566665431 234456788877877664 322 24799999987310 0
Q ss_pred CcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 235 EPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 235 ~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
..+.+.. +...-...++.+.++.|+|... ....|+++++++ .. ...++.... .....++..|.+.
T Consensus 461 ~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~-------~~~~I~v~~ldG-~~--~~~l~~~~l----~~P~gIaVDp~~g 526 (791)
T 3m0c_C 461 SYDTVISRDIQAPDGLAVDWIHSNIYWTDS-------VLGTVSVADTKG-VK--RKTLFRENG----SKPRAIVVDPVHG 526 (791)
T ss_dssp -CEEEECSSCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETTS-SS--EEEEEECTT----CCEEEEEEETTTT
T ss_pred ceeEEEecCCCCcceeeeeecCCcEEEEec-------CCCeEEEEeCCC-Ce--EEEEEeCCC----CCcceEEEecCCC
Confidence 0344443 3333345678888988887652 245899999873 22 123333221 2345567788755
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
.+|.+|. .....|+++++++...+.|... .+..| .+ +++.+ .++.||++- .+...|+++++++...
T Consensus 527 ~LYwtD~-g~~~~I~~~~~dG~~~~~lv~~--~l~~P---~G---LavD~---~~~~LYwaD--~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 527 FMYWTDW-GTPAKIKKGGLNGVDIYSLVTE--NIQWP---NG---ITLDL---LSGRLYWVD--SKLHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEEEC-SSSCEEEEEETTSCCEEEEECS--SCSCE---EE---EEEET---TTTEEEEEE--TTTTEEEEEETTSCSC
T ss_pred CEEEecC-CCCCeEEEEecCCCceEEEEeC--CCCCc---eE---EEEec---CCCeEEEEe--CCCCcEEEEecCCCce
Confidence 4445554 2225799999977665555431 11222 11 34432 577888763 3456799999987766
Q ss_pred EeecCC---CceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 394 SLLDIP---FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 394 ~~l~~~---~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.+... ...-.+++..+++||++-. ....|++++..+|+
T Consensus 593 ~~v~~~~~~l~~P~glav~~~~lYwtD~---~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 593 KTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTGS 634 (791)
T ss_dssp EEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTCC
T ss_pred EEEecCCCccCCCCEEEEeCCEEEEEEC---CCCEEEEEeCCCCc
Confidence 655321 2222344567777766542 34688888865554
No 168
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=98.16 E-value=3.1e-06 Score=83.65 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=56.7
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhc-CcEEEEeCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGSTG 537 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asr-GyaVl~~NyRGStG 537 (548)
..+.+++++. || ++++++|.|.+. .++.|+||++|||+.. .....|....+.|+.+ ||.|+.+||||..+
T Consensus 47 ~~~~~~i~~~-~g-~l~~~~~~P~~~------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~ 118 (310)
T 2hm7_A 47 EVREFDMDLP-GR-TLKVRMYRPEGV------EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPE 118 (310)
T ss_dssp EEEEEEEEET-TE-EEEEEEEECTTC------CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred eEEEEEeccC-CC-eEEEEEEecCCC------CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCC
Confidence 4577889987 77 999999999641 2457999999999853 3344566677889886 99999999999887
Q ss_pred CC
Q 008927 538 LS 539 (548)
Q Consensus 538 yG 539 (548)
++
T Consensus 119 ~~ 120 (310)
T 2hm7_A 119 HK 120 (310)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 169
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=98.16 E-value=3.7e-06 Score=78.09 Aligned_cols=72 Identities=11% Similarity=0.119 Sum_probs=54.2
Q ss_pred cCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc---ccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE---ARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 459 ~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~---~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
...+.+++++. || +++++++.|.+.. .++.|+||++||+|... ....|....+.|+++||.|+.+|+||.
T Consensus 8 ~~~~~~~~~~~-~g-~~~~~~~~p~~~~-----~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 80 (220)
T 2fuk_A 8 TESAALTLDGP-VG-PLDVAVDLPEPDV-----AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSV 80 (220)
T ss_dssp SSCEEEEEEET-TE-EEEEEEECCCTTS-----CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTS
T ss_pred ccceEEEEeCC-CC-eEEEEEEeCCCCC-----ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCC
Confidence 35688999997 88 8999999996410 14579999999987422 112244567889999999999999986
Q ss_pred CC
Q 008927 536 TG 537 (548)
Q Consensus 536 tG 537 (548)
..
T Consensus 81 g~ 82 (220)
T 2fuk_A 81 GT 82 (220)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 170
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.14 E-value=5.1e-05 Score=75.09 Aligned_cols=231 Identities=11% Similarity=-0.001 Sum_probs=129.6
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCC----ceecCCCCCCCCceecceeeCCCCC-EEEEEEeccCCCCCCceeEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSS----PLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~----~~~lT~~~~~~~~~~~~~~~SpDG~-~i~~v~~~~~~~~~~~~~~l 223 (548)
+|++++..|+... .++.|++.++.. ++ .+.+... ...+..+.|+|+|+ .|+....+ ..|
T Consensus 18 ~~s~~~~~l~~~~-~d~~v~iw~~~~--~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d---------g~i 81 (342)
T 1yfq_A 18 KIIPSKSLLLITS-WDGSLTVYKFDI--QAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQ---------GEI 81 (342)
T ss_dssp EEEGGGTEEEEEE-TTSEEEEEEEET--TTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETT---------SCE
T ss_pred EEcCCCCEEEEEc-CCCeEEEEEeCC--CCccccceeeeec----CCceEEEEECCCCCcEEEEEcCC---------CeE
Confidence 5777777666554 567777777765 44 3333322 23466778999999 77665433 368
Q ss_pred EEEEC-CCCCccCcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCC--------CceeeeEEE
Q 008927 224 VAIAL-NGQNIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN--------GDVYKRVCV 292 (548)
Q Consensus 224 ~~idl-~~g~~~~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~--------g~~~~~~~l 292 (548)
.++|+ .+++ ...+.. ....+....|+| ++.|+.... ...|.+.++... ++ ....+
T Consensus 82 ~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~--------d~~i~iwd~~~~~~~~~~~~~~--~~~~~ 147 (342)
T 1yfq_A 82 LKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASW--------DGLIEVIDPRNYGDGVIAVKNL--NSNNT 147 (342)
T ss_dssp EEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEET--------TSEEEEECHHHHTTBCEEEEES--CSSSS
T ss_pred EEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcC--------CCeEEEEcccccccccccccCC--eeeEE
Confidence 89999 8887 666665 555577789999 888875542 346888887630 21 01112
Q ss_pred cCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccC-Cee--EeecccccccCCCcccccCcceeeeeecCC-C
Q 008927 293 AGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN-NEV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGE-K 368 (548)
Q Consensus 293 ~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~-g~~--~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d-~ 368 (548)
. .. ..+..+.|+|++ ++.. .. ++ .|..+++.+ ++. ...... ...+ .....+. . +
T Consensus 148 ~-~~----~~v~~~~~~~~~-l~~~-~~-d~--~i~i~d~~~~~~~~~~~~~~~---~~~~-----i~~i~~~----~~~ 205 (342)
T 1yfq_A 148 K-VK----NKIFTMDTNSSR-LIVG-MN-NS--QVQWFRLPLCEDDNGTIEESG---LKYQ-----IRDVALL----PKE 205 (342)
T ss_dssp S-SC----CCEEEEEECSSE-EEEE-ES-TT--EEEEEESSCCTTCCCEEEECS---CSSC-----EEEEEEC----SGG
T ss_pred e-eC----CceEEEEecCCc-EEEE-eC-CC--eEEEEECCccccccceeeecC---CCCc-----eeEEEEC----CCC
Confidence 2 11 456778899887 4433 33 33 567777766 432 111110 0011 1123443 3 3
Q ss_pred CEEEEEEEeCCeEEEEEEECC-----CCceEeecCCCc---------eeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 369 NLIACSYRQNGRSYLGILDDF-----GHSLSLLDIPFT---------DIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 369 ~~l~~~~~~~g~~~L~~~dl~-----~g~~~~l~~~~~---------~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
+.++++...++.-.|+.++.. ......+..... .+..+ +++++.|+ +++. ...|+++|+.
T Consensus 206 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~---dg~i~vwd~~ 281 (342)
T 1yfq_A 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGS---DGIISCWNLQ 281 (342)
T ss_dssp GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEET---TSCEEEEETT
T ss_pred CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE-EecC---CceEEEEcCc
Confidence 445555666777666666544 122333332211 34443 56666554 3332 3578899988
Q ss_pred CCc
Q 008927 433 DHK 435 (548)
Q Consensus 433 ~~~ 435 (548)
+++
T Consensus 282 ~~~ 284 (342)
T 1yfq_A 282 TRK 284 (342)
T ss_dssp TTE
T ss_pred cHh
Confidence 775
No 171
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=98.14 E-value=3.1e-06 Score=86.60 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=53.4
Q ss_pred cCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 459 ~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
...|.+++++ ||.+|+++++.|.+ .++.|+||++||+..... ..+. ..+.|+++||+|+.+|+||...
T Consensus 125 ~~~~~v~~~~--dg~~i~~~l~~p~~-------~~~~P~vl~~hG~~~~~~-~~~~-~~~~l~~~G~~v~~~d~rG~G~ 192 (386)
T 2jbw_A 125 PPAERHELVV--DGIPMPVYVRIPEG-------PGPHPAVIMLGGLESTKE-ESFQ-MENLVLDRGMATATFDGPGQGE 192 (386)
T ss_dssp SCEEEEEEEE--TTEEEEEEEECCSS-------SCCEEEEEEECCSSCCTT-TTHH-HHHHHHHTTCEEEEECCTTSGG
T ss_pred CCeEEEEEEe--CCEEEEEEEEcCCC-------CCCCCEEEEeCCCCccHH-HHHH-HHHHHHhCCCEEEEECCCCCCC
Confidence 3578899998 79999999999964 246799999888864432 2233 3899999999999999999643
No 172
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=98.14 E-value=4.1e-06 Score=82.63 Aligned_cols=80 Identities=15% Similarity=0.108 Sum_probs=60.0
Q ss_pred cCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC-----ccChHHHHHHhc----CcEEEE
Q 008927 459 SLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----ILNLSIQYWTSR----GWAFVD 529 (548)
Q Consensus 459 ~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~-----~~~~~~Q~~asr----GyaVl~ 529 (548)
.+.+.++|++. +| ++..++|.|.+ |++ ++++|+||++|||+.....+ .+....+.|+++ ||+|+.
T Consensus 39 g~~~~~~~~s~-~~-~~~~~vy~P~~--~~~--~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~ 112 (297)
T 1gkl_A 39 GRIVKETYTGI-NG-TKSLNVYLPYG--YDP--NKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVT 112 (297)
T ss_dssp CEEEEEEEEET-TE-EEEEEEEECTT--CCT--TSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEE
T ss_pred ceEEEEEEEcC-CC-EEEEEEEeCCC--CCC--CCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEE
Confidence 45678999997 76 89999999965 543 57899999999998754321 111234567776 499999
Q ss_pred eCCCCCCCCChhhhh
Q 008927 530 VNYGGSTGLSSVPST 544 (548)
Q Consensus 530 ~NyRGStGyG~~f~~ 544 (548)
||+||+.+.+.+|.+
T Consensus 113 pd~~~~~~~~~~~~~ 127 (297)
T 1gkl_A 113 PTFNGGNCTAQNFYQ 127 (297)
T ss_dssp CCSCSTTCCTTTHHH
T ss_pred ecCcCCccchHHHHH
Confidence 999999888877754
No 173
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=98.12 E-value=3.1e-06 Score=83.81 Aligned_cols=72 Identities=24% Similarity=0.262 Sum_probs=55.8
Q ss_pred ccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhc-CcEEEEeCCCCC
Q 008927 458 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGS 535 (548)
Q Consensus 458 ~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asr-GyaVl~~NyRGS 535 (548)
....+.+++++. +| ++++++|.|.+ +++.|+||++|||+.. .....|....+.|+.+ ||.|+.+||||.
T Consensus 48 ~~~~~~~~i~~~-~g-~~~~~~~~P~~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~ 118 (313)
T 2wir_A 48 IHRVEDITIPGR-GG-PIRARVYRPRD-------GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLA 118 (313)
T ss_dssp CSEEEEEEEEET-TE-EEEEEEEECSC-------CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCT
T ss_pred CceEEEEEeeCC-CC-cEEEEEEecCC-------CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCC
Confidence 445678899997 77 99999999964 3457999999999843 2334456667788875 999999999997
Q ss_pred CCC
Q 008927 536 TGL 538 (548)
Q Consensus 536 tGy 538 (548)
...
T Consensus 119 g~~ 121 (313)
T 2wir_A 119 PEH 121 (313)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 174
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.12 E-value=0.00028 Score=72.88 Aligned_cols=201 Identities=10% Similarity=0.029 Sum_probs=108.9
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCC---------CCCceecCCCCCCCCceecceeeCCCCC-EEEEEEeccCCCCCC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSK---------DSSPLPITPDYGEPLVSYADGIFDPRFN-RYVTVREDRRQDALN 218 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~---------~~~~~~lT~~~~~~~~~~~~~~~SpDG~-~i~~v~~~~~~~~~~ 218 (548)
+|+++++.++++...++.|++.++... ......+... ......+.|+|+++ .|+....+
T Consensus 135 ~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~~~d------- 203 (430)
T 2xyi_A 135 RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----QKEGYGLSWNPNLNGYLLSASDD------- 203 (430)
T ss_dssp EEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----SSCCCCEEECTTSTTEEEEECTT-------
T ss_pred EECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----CCCeEEEEeCCCCCCeEEEEeCC-------
Confidence 455544567777666787877777531 0111222222 12355678999998 55443222
Q ss_pred ceeEEEEEECCCCCcc-----CcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEc
Q 008927 219 STTEIVAIALNGQNIQ-----EPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA 293 (548)
Q Consensus 219 ~~~~l~~idl~~g~~~-----~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~ 293 (548)
..|.++|+.++... ....+......+....|+|++..++..... ...|++.|+...........+.
T Consensus 204 --g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-------dg~i~i~d~~~~~~~~~~~~~~ 274 (430)
T 2xyi_A 204 --HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-------DQKLMIWDTRNNNTSKPSHTVD 274 (430)
T ss_dssp --SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET-------TSEEEEEETTCSCSSSCSEEEE
T ss_pred --CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC-------CCeEEEEECCCCCCCcceeEee
Confidence 35888888874310 012232333346678899955544434422 4579999998532111223333
Q ss_pred CCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCC-e-eEeecccccccCCCcccccCcceeeeeecCCCCE
Q 008927 294 GFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNN-E-VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNL 370 (548)
Q Consensus 294 ~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g-~-~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~ 370 (548)
... ..+..+.|+|+++ ++++... +|. |.++|+... + ...+... ..+ .....|.| +++.
T Consensus 275 ~~~----~~v~~i~~~p~~~~~l~tg~~-dg~--v~vwd~~~~~~~~~~~~~h----~~~-----v~~i~~sp---~~~~ 335 (430)
T 2xyi_A 275 AHT----AEVNCLSFNPYSEFILATGSA-DKT--VALWDLRNLKLKLHSFESH----KDE-----IFQVQWSP---HNET 335 (430)
T ss_dssp CCS----SCEEEEEECSSCTTEEEEEET-TSE--EEEEETTCTTSCSEEEECC----SSC-----EEEEEECS---SCTT
T ss_pred cCC----CCeEEEEeCCCCCCEEEEEeC-CCe--EEEEeCCCCCCCeEEeecC----CCC-----EEEEEECC---CCCC
Confidence 332 4577889999998 7777665 554 556666542 2 2222211 111 12245654 6667
Q ss_pred EEEEEEeCCeEEEEEEECCC
Q 008927 371 IACSYRQNGRSYLGILDDFG 390 (548)
Q Consensus 371 l~~~~~~~g~~~L~~~dl~~ 390 (548)
++++...++.- .++|+..
T Consensus 336 ~l~s~~~d~~i--~iwd~~~ 353 (430)
T 2xyi_A 336 ILASSGTDRRL--HVWDLSK 353 (430)
T ss_dssp EEEEEETTSCC--EEEEGGG
T ss_pred EEEEEeCCCcE--EEEeCCC
Confidence 77777666654 4455544
No 175
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.12 E-value=0.0017 Score=70.65 Aligned_cols=231 Identities=14% Similarity=0.121 Sum_probs=138.0
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.|+|++ ...|.++++++ .+...+.+.. .-.....+.|+++++.|+++ +.. ...|++++++++.
T Consensus 8 ~Ll~s~--~~~I~~i~l~~--~~~~~~~~~~--~~~~~~~l~~d~~~~~lywt-D~~-------~~~I~r~~~~g~~--- 70 (628)
T 4a0p_A 8 FLLFSR--RADIRRISLET--NNNNVAIPLT--GVKEASALDFDVTDNRIYWT-DIS-------LKTISRAFMNGSA--- 70 (628)
T ss_dssp EEEEEE--TTEEEEEESSC--TTCEEECCCC--SCSCEEEEEEETTTTEEEEE-ETT-------TTEEEEEETTSCS---
T ss_pred EEEEEe--CCcEEEEECCC--CCcceEEEcC--CCCceEEEEEECCCCEEEEE-ECC-------CCeEEEEECCCCC---
Confidence 688886 66899999987 4444433321 01134467799988887664 332 2579999999876
Q ss_pred cEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcE
Q 008927 236 PKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 314 (548)
Q Consensus 236 ~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L 314 (548)
.+.+.. +...-...++.+.++.|+|... ....|.++++++ .. ...++...- ......+..|....
T Consensus 71 ~~~v~~~g~~~P~GlAvD~~~~~LY~tD~-------~~~~I~v~~~dG-~~--~~~l~~~~l----~~P~~iavdp~~G~ 136 (628)
T 4a0p_A 71 LEHVVEFGLDYPEGMAVDWLGKNLYWADT-------GTNRIEVSKLDG-QH--RQVLVWKDL----DSPRALALDPAEGF 136 (628)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEET-------TTTEEEEEETTS-TT--CEEEECSSC----CCEEEEEEETTTTE
T ss_pred cEEEEeCCCCCcceEEEEeCCCEEEEEEC-------CCCEEEEEecCC-Cc--EEEEEeCCC----CCcccEEEccCCCe
Confidence 555543 3222344567777888887642 246899999873 22 122332221 23455677775444
Q ss_pred EEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 315 FFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 315 ~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
+|.+|. .....|+++++++...+.+.. ....| . .+++.+ ++++||++- .+...|+++|++++..+
T Consensus 137 lY~tD~-g~~~~I~r~~~dG~~~~~l~~---~~~~P---~---GlalD~---~~~~LY~aD--~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 137 MYWTEW-GGKPKIDRAAMDGSERTTLVP---NVGRA---N---GLTIDY---AKRRLYWTD--LDTNLIESSNMLGLNRE 201 (628)
T ss_dssp EEEEEC-SSSCEEEEEETTSCSCEEEEC---SCSSE---E---EEEEET---TTTEEEEEE--TTTTEEEEEETTSCSCE
T ss_pred EEEeCC-CCCCEEEEEeCCCCceEEEEC---CCCCc---c---eEEEcc---ccCEEEEEE--CCCCEEEEEcCCCCceE
Confidence 444564 235689999997776665542 12222 1 234432 578888754 34557899999876655
Q ss_pred eecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 395 LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 395 ~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.+......-.+++.+++.+|++- .....|+++|..+++
T Consensus 202 v~~~~l~~P~glav~~~~ly~tD---~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 202 VIADDLPHPFGLTQYQDYIYWTD---WSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEECCSCEEEEEEETTEEEEEE---TTTTEEEEEETTTCC
T ss_pred EeeccCCCceEEEEECCEEEEec---CCCCEEEEEECCCCC
Confidence 44333223334566677776653 234688899865554
No 176
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.11 E-value=0.003 Score=65.00 Aligned_cols=156 Identities=10% Similarity=-0.043 Sum_probs=81.9
Q ss_pred EECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCC-C----CCCc-eecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY-G----EPLV-SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 152 ~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~-~----~~~~-~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
.+.++|+-...++.+||++|...+...++.+..-+ + .... +-.....+||| |+....... .++....|++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~--~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNE--EGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEET--TSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCc--CCCCCCeEEE
Confidence 66777888887888999999864212333221110 0 0001 11224588999 333222111 1234578999
Q ss_pred EECCCCCccCcEEeeec--C-CceeeeEECCCCCEEEEEE-ecCCC------CC-----CCCceEEEEEecCCCceeeeE
Q 008927 226 IALNGQNIQEPKVLVSG--S-DFYAFPRMDPRGERMAWIE-WHHPN------MP-----WDKAELWVGYISENGDVYKRV 290 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~--~-~~~~~p~~SPDGk~La~~~-~~~~~------~p-----~~~~~L~v~~~~~~g~~~~~~ 290 (548)
+|.++++. ...+..+ + .+.....|+||++.++ ++ |..|. ++ ....+|.++|++. +++. .
T Consensus 169 lD~~T~~v--~~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~--~ 242 (462)
T 2ece_A 169 LDHYSFEP--LGKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRI--H 242 (462)
T ss_dssp ECTTTCCE--EEECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEE--E
T ss_pred EECCCCeE--EEEEccCCCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEEEECCC-CcEe--e
Confidence 99999872 2334322 2 2233568999999554 44 32211 01 1257899999984 5432 2
Q ss_pred EEcCCCCCcccCCcC--ceECcCCc-EEEEEe
Q 008927 291 CVAGFDPTIVESPTE--PKWSSKGE-LFFVTD 319 (548)
Q Consensus 291 ~l~~~~~~~~~~~~~--~~wspDG~-L~~~sd 319 (548)
.+.-+..+ ..... +.++|||+ .|+...
T Consensus 243 tI~vg~~g--~~P~~i~f~~~Pdg~~aYV~~e 272 (462)
T 2ece_A 243 SLTLGEEN--RMALELRPLHDPTKLMGFINMV 272 (462)
T ss_dssp EEESCTTE--EEEEEEEECSSTTCCEEEEEEE
T ss_pred EEecCCCC--CccceeEeeECCCCCEEEEEEe
Confidence 22221101 11222 34599999 555454
No 177
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.11 E-value=0.00064 Score=67.74 Aligned_cols=149 Identities=11% Similarity=0.028 Sum_probs=90.7
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCC
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~ 232 (548)
++.|+ +...++.|.+.++.. ++. ..+... ...+..+.|+||++.|+....+ ..|.++|+.++.
T Consensus 154 ~~~l~-s~s~d~~i~~wd~~~--~~~~~~~~~h----~~~v~~~~~~~~~~~l~sg~~d---------~~v~~wd~~~~~ 217 (340)
T 1got_B 154 DNQIV-TSSGDTTCALWDIET--GQQTTTFTGH----TGDVMSLSLAPDTRLFVSGACD---------ASAKLWDVREGM 217 (340)
T ss_dssp TTEEE-EEETTSCEEEEETTT--TEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTCS
T ss_pred CCcEE-EEECCCcEEEEECCC--CcEEEEEcCC----CCceEEEEECCCCCEEEEEeCC---------CcEEEEECCCCe
Confidence 34444 344567788888875 433 333332 2345677899999977665433 357888998886
Q ss_pred ccCcEE-eeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcC
Q 008927 233 IQEPKV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 311 (548)
Q Consensus 233 ~~~~~~-L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspD 311 (548)
... +......+....|+|||+.|+-.+. ...|.+.|+.. ++ ....+...... ..+....|+||
T Consensus 218 ---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~--------d~~v~iwd~~~-~~--~~~~~~~~~~~--~~v~~~~~s~~ 281 (340)
T 1got_B 218 ---CRQTFTGHESDINAICFFPNGNAFATGSD--------DATCRLFDLRA-DQ--ELMTYSHDNII--CGITSVSFSKS 281 (340)
T ss_dssp ---EEEEECCCSSCEEEEEECTTSSEEEEEET--------TSCEEEEETTT-TE--EEEEECCTTCC--SCEEEEEECTT
T ss_pred ---eEEEEcCCcCCEEEEEEcCCCCEEEEEcC--------CCcEEEEECCC-Cc--EEEEEccCCcc--cceEEEEECCC
Confidence 433 3333445677899999998874441 34688889874 33 12223221101 24667899999
Q ss_pred CcEEEEEeCCCCeeeEEEEeccCCee
Q 008927 312 GELFFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 312 G~L~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
|++++.... +| .|.++|..+++.
T Consensus 282 g~~l~~g~~-d~--~i~vwd~~~~~~ 304 (340)
T 1got_B 282 GRLLLAGYD-DF--NCNVWDALKADR 304 (340)
T ss_dssp SSEEEEEET-TS--EEEEEETTTCCE
T ss_pred CCEEEEECC-CC--eEEEEEcccCcE
Confidence 996655544 44 466677666654
No 178
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.11 E-value=0.0011 Score=68.14 Aligned_cols=204 Identities=11% Similarity=0.038 Sum_probs=110.7
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~ 233 (548)
++.|++.+..++.|+++++++ +..+.+.... . .-. +.|+|+|+.|+.. .... ...|++++..++..
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~--g~~~~~~~~~---~-~~~-ia~~~~g~~l~~~-d~~~------~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDD--NKVTTVHPGF---K-GGK-PAVTKDKQRVYSI-GWEG------THTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTT--TEEEEEEETC---C-BCB-CEECTTSSEEEEE-BSST------TCEEEEEEGGGTTC
T ss_pred CCCEEEEecCCCcEEEEECCC--CEEEEeeccC---C-CCc-eeEecCCCcEEEE-ecCC------CceEEEEEcCCCce
Confidence 346888877678999999986 5555443321 1 112 7899999986664 3221 12799999987751
Q ss_pred cCcEEe----eecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE----cCCCCCcccCC-c
Q 008927 234 QEPKVL----VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV----AGFDPTIVESP-T 304 (548)
Q Consensus 234 ~~~~~L----~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l----~~~~~~~~~~~-~ 304 (548)
.+.+ ..........+++|++.+|++ . +. ...|+.++.+. +. ...+ .... . ... .
T Consensus 207 --~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~-d~------~~~I~~~d~~~-~~---~~~~~~~~~~g~-~--~~~P~ 269 (409)
T 3hrp_A 207 --PTRIGQLGSTFSGKIGAVALDETEEWLYF-V-DS------NKNFGRFNVKT-QE---VTLIKQLELSGS-L--GTNPG 269 (409)
T ss_dssp --EEEEEECCTTSCSCCCBCEECTTSSEEEE-E-CT------TCEEEEEETTT-CC---EEEEEECCCCSC-C--CCSSC
T ss_pred --eEEeeeccchhcCCcEEEEEeCCCCeEEE-E-EC------CCcEEEEECCC-CC---EEEEecccccCC-C--CCCcc
Confidence 2333 111222345689997666765 4 21 34799999873 43 2222 1111 0 112 2
Q ss_pred -CceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccc--cccCC-C---cccccCcceeeeeecCCCCEEEEEEEe
Q 008927 305 -EPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLD--AEFSR-P---LWVFGINSYEIIQSHGEKNLIACSYRQ 377 (548)
Q Consensus 305 -~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~--~d~~~-p---~w~~~~~~~~~~~~~~d~~~l~~~~~~ 377 (548)
.+.|+|++..+|++|. +...|++++.++ +...+.... ..+.. + .-.......++.+ +++ ||++ .
T Consensus 270 ~~ia~~p~~g~lyv~d~--~~~~I~~~~~~g-~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~---dG~-lyva-d- 340 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQ--NLSSVYKITPDG-ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDE---DGN-FYIV-D- 340 (409)
T ss_dssp CEEEEETTTTEEEEEET--TTTEEEEECTTC-CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT---TCC-EEEE-E-
T ss_pred ccEEEeCCCCEEEEEeC--CCCEEEEEecCC-CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC---CCC-EEEE-e-
Confidence 7889996553344554 234799998754 344332110 00000 0 0000011234542 444 6544 2
Q ss_pred C-CeEEEEEEECCCCceEeec
Q 008927 378 N-GRSYLGILDDFGHSLSLLD 397 (548)
Q Consensus 378 ~-g~~~L~~~dl~~g~~~~l~ 397 (548)
. +...|.++++.+|.+..+.
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEEe
Confidence 3 4567889997788776554
No 179
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=98.11 E-value=2.7e-06 Score=87.47 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=55.5
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccc------------cCccC----hHHHHHHhcC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA------------RGILN----LSIQYWTSRG 524 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~------------~~~~~----~~~Q~~asrG 524 (548)
.|.++|++. ||.+++++++.|.+ . .+++|+||++||+..... ...|. ...+.|+++|
T Consensus 87 ~e~v~~~~~-~g~~l~~~l~~P~~--~----~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G 159 (391)
T 3g8y_A 87 LEKWEFYPF-PKSVSTFLVLKPEH--L----KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEG 159 (391)
T ss_dssp EEEEEECCS-TTCCEEEEEEEETT--C----CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTT
T ss_pred EEEEEEEcC-CCCEEEEEEEeCCC--C----CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCC
Confidence 467899998 99999999999964 1 357899999999643321 01122 5678999999
Q ss_pred cEEEEeCCCCCCCCC
Q 008927 525 WAFVDVNYGGSTGLS 539 (548)
Q Consensus 525 yaVl~~NyRGStGyG 539 (548)
|+|+.+|+||....+
T Consensus 160 ~~Vl~~D~rg~G~s~ 174 (391)
T 3g8y_A 160 YVAVAVDNAAAGEAS 174 (391)
T ss_dssp CEEEECCCTTSGGGC
T ss_pred CEEEEecCCCccccC
Confidence 999999999976654
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.10 E-value=0.0017 Score=65.48 Aligned_cols=130 Identities=6% Similarity=-0.010 Sum_probs=69.0
Q ss_pred CCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCC--CCceEEE
Q 008927 200 PRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPW--DKAELWV 277 (548)
Q Consensus 200 pDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~--~~~~L~v 277 (548)
+|+++++.+...... .....|+++|.++++. ...+..+. .- ...+||||++|+..........+ ....|.+
T Consensus 13 ~~~~~~yv~~~~~~~---~~d~~v~v~D~~t~~~--~~~i~~g~-~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 13 PQENRIYVMDSVFMH---LTESRVHVYDYTNGKF--LGMVPTAF-NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp CGGGEEEEEECCGGG---GGGCEEEEEETTTCCE--EEEEECCE-EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCCCEEEEECCCCCc---cccCeEEEEECCCCeE--EEEecCCC-CC-ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence 477775444322110 0125899999998872 22333222 22 67899999987643321000000 1245888
Q ss_pred EEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeE
Q 008927 278 GYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 278 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
+|+.. ++......+...............++|||+.+|+++. .....|..+|+++++..
T Consensus 86 ~d~~t-~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~-~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 86 WDADK-LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA-SPATSIGIVDVAKGDYV 144 (361)
T ss_dssp EETTT-CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE-SSSEEEEEEETTTTEEE
T ss_pred EECcC-CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC-CCCCeEEEEECCCCcEE
Confidence 88874 4422112222110000023456889999996666654 22346888888887654
No 181
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=98.09 E-value=2.3e-06 Score=92.74 Aligned_cols=78 Identities=14% Similarity=0.128 Sum_probs=57.6
Q ss_pred CccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccChHH-HHHHhcCcEEEEeCCCC
Q 008927 457 YFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSI-QYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 457 ~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~~~~-Q~~asrGyaVl~~NyRG 534 (548)
.+...+.++++.+ ||.+|++.+|.|.+ .+++|+||+.||.-... ....|.... ++|+++||+|+.+|+||
T Consensus 5 ~~~~~~~v~i~~~-DG~~L~~~~~~P~~-------~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG 76 (587)
T 3i2k_A 5 NYSVASNVMVPMR-DGVRLAVDLYRPDA-------DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRG 76 (587)
T ss_dssp CEEEEEEEEEECT-TSCEEEEEEEEECC-------SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEEEEECC-CCCEEEEEEEECCC-------CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCC
Confidence 3445678999998 99999999999964 34789999998632221 111233234 89999999999999999
Q ss_pred CCCCChhh
Q 008927 535 STGLSSVP 542 (548)
Q Consensus 535 StGyG~~f 542 (548)
+.+.+-.|
T Consensus 77 ~G~S~g~~ 84 (587)
T 3i2k_A 77 LFASEGEF 84 (587)
T ss_dssp STTCCSCC
T ss_pred CCCCCCcc
Confidence 88766544
No 182
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.09 E-value=0.0012 Score=65.22 Aligned_cols=241 Identities=8% Similarity=-0.018 Sum_probs=122.8
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| |..++--. .++...||..... ...+.+....-.+. .-.|++++..| .+...++.|
T Consensus 66 ~~v~~~~~s~dg~~l~s~s----~D~~v~~wd~~~~--~~~~~~~~h~~~v~-------~~~~~~~~~~l-~s~s~D~~i 131 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSAS----WDKTLRLWDVATG--ETYQRFVGHKSDVM-------SVDIDKKASMI-ISGSRDKTI 131 (319)
T ss_dssp SCEEEEEECTTSSEEEEEE----TTSEEEEEETTTT--EEEEEEECCSSCEE-------EEEECTTSCEE-EEEETTSCE
T ss_pred ccEEEEEECCCCCEEEEEe----CCCEEEEEECCCC--CeeEEEccCCCcEE-------EEEEcCCCCEE-EEEeCCCeE
Confidence 4566778888 55544332 2477777766332 12222322211111 01344445444 444456767
Q ss_pred EEEeCCCCCCCceecCCCCCCCCceecceeeCCC------CCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE-ee
Q 008927 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPR------FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV-LV 240 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpD------G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~-L~ 240 (548)
.+.++.+ .....+... ........++|. +..|+....+ ..|.++|+.+++ ... +.
T Consensus 132 ~vwd~~~--~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~l~s~~~d---------~~i~~wd~~~~~---~~~~~~ 193 (319)
T 3frx_A 132 KVWTIKG--QCLATLLGH----NDWVSQVRVVPNEKADDDSVTIISAGND---------KMVKAWNLNQFQ---IEADFI 193 (319)
T ss_dssp EEEETTS--CEEEEECCC----SSCEEEEEECCC------CCEEEEEETT---------SCEEEEETTTTE---EEEEEC
T ss_pred EEEECCC--CeEEEEecc----CCcEEEEEEccCCCCCCCccEEEEEeCC---------CEEEEEECCcch---hheeec
Confidence 7777765 333444332 123445567774 3355443322 357788988875 332 33
Q ss_pred ecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeC
Q 008927 241 SGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR 320 (548)
Q Consensus 241 ~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~ 320 (548)
.....+....|||||+.|+-... ...|.+.|+.. ++ ....+... ..+....|+|||.+++....
T Consensus 194 ~h~~~v~~~~~sp~g~~l~s~~~--------dg~i~iwd~~~-~~--~~~~~~~~-----~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 194 GHNSNINTLTASPDGTLIASAGK--------DGEIMLWNLAA-KK--AMYTLSAQ-----DEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp CCCSCEEEEEECTTSSEEEEEET--------TCEEEEEETTT-TE--EEEEEECC-----SCEEEEEECSSSSEEEEEET
T ss_pred CCCCcEEEEEEcCCCCEEEEEeC--------CCeEEEEECCC-Cc--EEEEecCC-----CcEEEEEEcCCCCEEEEEcC
Confidence 33445667889999998874441 35788889874 43 23334332 35678899999995444433
Q ss_pred CCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 321 KNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 321 ~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
.+ +..++++.+... .+.+....... ..........|+| |++.|+ +...++.-+||-+
T Consensus 258 -~~---i~v~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp---dg~~l~-sg~~Dg~i~vWd~ 315 (319)
T 3frx_A 258 -TG---IKVFSLDPQYLVDDLRPEFAGYSK-AAEPHAVSLAWSA---DGQTLF-AGYTDNVIRVWQV 315 (319)
T ss_dssp -TE---EEEEEETTEEEEEEECCCCTTCCG-GGCCCEEEEEECT---TSSEEE-EEETTSCEEEEEE
T ss_pred -CC---cEEEEeCcCeeeeccCcccccccc-CcCcceeEEEECC---CCCEEE-EeecCceEEEEEE
Confidence 22 444455444332 22211000000 0000112355664 666654 5556666555544
No 183
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.09 E-value=0.0026 Score=64.39 Aligned_cols=290 Identities=11% Similarity=0.047 Sum_probs=146.5
Q ss_pred CCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 88 ~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
...+..+.++| |+.++--. .+|...||..... .....+......+. .-+|++++..|+- ...++.
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s----~D~~v~iWd~~~~--~~~~~~~~h~~~v~-------~~~~s~~g~~las-~~~d~~ 131 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSAS----QDGRLIVWNALTS--QKTHAIKLHCPWVM-------ECAFAPNGQSVAC-GGLDSA 131 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEE----TTSEEEEEETTTT--EEEEEEECCCTTCC-------CCEECTTSSEEEE-CCSSSC
T ss_pred ccEEEEEEEcCCCCEEEEEe----CCCeEEEEECCCC--ccceEEecCCCCEE-------EEEECCCCCEEEE-eeCCCc
Confidence 35677888999 66654433 2577777865332 11222221111111 1257777776654 334555
Q ss_pred EEEEeCCCCC---CC---ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 167 LYKHSIDSKD---SS---PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 167 Ly~~~~~~~~---~~---~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
+.+.++.... +. .+.++.. ........|+|++...++..... ..|.++|+.+++ .....
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh----~~~v~~~~~~~~~~~~l~s~s~D--------~~i~~wd~~~~~---~~~~~ 196 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGH----KGYASSCQYVPDQETRLITGSGD--------QTCVLWDVTTGQ---RISIF 196 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCC----SSCCCCCBCCSSSSSCEEEECTT--------SCEEEECTTTCC---EEEEE
T ss_pred EEEEECCCCccccCCccceeeccCC----CcceEEEEEecCCCCEEEEECCC--------CcEEEEEcCCCc---EEEEe
Confidence 5555554210 11 1122222 12344567888765433332221 358888999886 33322
Q ss_pred -----ec-CCceeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 241 -----SG-SDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 241 -----~~-~~~~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
.+ ...+....|+| |++.|+-.+. ...|.+.|+...+. ....+.+.. ..+....|+|||+
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~--------D~~v~~wd~~~~~~--~~~~~~~h~----~~v~~v~~~p~~~ 262 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGSC--------DTTVRLWDLRITSR--AVRTYHGHE----GDINSVKFFPDGQ 262 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEET--------TSCEEEEETTTTCC--CCEEECCCS----SCCCEEEECTTSS
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEEC--------CCeEEEEECCCCCc--ceEEECCcC----CCeEEEEEecCCC
Confidence 11 12244556766 7777663331 34588888864332 234455443 5678899999999
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
+++.... +| .|.++|+.+++............ ...........|.| +++.|+ +...+| .|+++|+..++.
T Consensus 263 ~l~s~s~-D~--~i~lwd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~---~g~~l~-~g~~dg--~i~vwd~~~~~~ 332 (380)
T 3iz6_a 263 RFGTGSD-DG--TCRLFDMRTGHQLQVYNREPDRN-DNELPIVTSVAFSI---SGRLLF-AGYSNG--DCYVWDTLLAEM 332 (380)
T ss_dssp EEEEECS-SS--CEEEEETTTTEEEEEECCCCSSS-CCSSCSCSEEEECS---SSSEEE-EECTTS--CEEEEETTTCCE
T ss_pred eEEEEcC-CC--eEEEEECCCCcEEEEeccccccc-ccccCceEEEEECC---CCCEEE-EEECCC--CEEEEECCCCce
Confidence 5555443 44 46667777776544432111100 00001122355664 666554 443444 466778877654
Q ss_pred E-eec---C-CCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 394 S-LLD---I-PFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 394 ~-~l~---~-~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
. .+. . ....+..+ ++++..|+ .++. -..|.++++.++
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~---D~~i~iW~~~~~ 376 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSALC-TGSW---DKNLKIWAFSGH 376 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEEE-EECT---TSCEEEEECCSS
T ss_pred EEEEecccCCCCCceEEEEECCCCCEEE-EeeC---CCCEEEEecCCC
Confidence 3 332 1 12234433 67777543 3332 245667776544
No 184
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.08 E-value=0.0033 Score=61.08 Aligned_cols=257 Identities=8% Similarity=0.001 Sum_probs=128.9
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEE-CCEEEEEeCCCCe
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF-GDTVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~-~~~i~F~~~~~~~ 166 (548)
..+..++++| |+.++--. .++...||............|....-.+. .-.|+++ .+.++.+...|+.
T Consensus 10 ~~V~~~~~s~~g~~las~s----~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-------~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCS----SDKTIKIFEVEGETHKLIDTLTGHEGPVW-------RVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp SCEEEEEECTTSSEEEEEE----TTSCEEEEEBCSSCBCCCEEECCCSSCEE-------EEEECCGGGCSEEEEEETTTE
T ss_pred CceEEEEECCCCCEEEEEe----CCCEEEEEecCCCCcEEEEEEccccCCeE-------EEEecCCCcCCEEEEEcCCCE
Confidence 3466788899 77665433 25777788764321011222322211111 1134443 2344555556776
Q ss_pred EEEEeCCCCCCCce---ecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee
Q 008927 167 LYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS 241 (548)
Q Consensus 167 Ly~~~~~~~~~~~~---~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~ 241 (548)
|.+-++.. ++.. .+... ...+....|+|+ |+.|+....+ ..|.++|+.++.......+..
T Consensus 79 v~iWd~~~--~~~~~~~~~~~h----~~~v~~v~~~p~~~g~~l~s~s~d---------~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 79 VMIWKEEN--GRWSQIAVHAVH----SASVNSVQWAPHEYGPMLLVASSD---------GKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp EEEEEBSS--SCBCCCEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEEBCSSSCBCCEEEEC
T ss_pred EEEEEcCC--CceEEEEEeecC----CCceeEEEeCcCCCCcEEEEEECC---------CcEEEEEecCCCceeeeeeec
Confidence 76667765 3322 22222 224567789998 7776665433 357778887653100223333
Q ss_pred cCCceeeeEECCC-------------CCEEEEEEecCCCCCCCCceEEEEEecCCCc-eeeeEEEcCCCCCcccCCcCce
Q 008927 242 GSDFYAFPRMDPR-------------GERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 242 ~~~~~~~p~~SPD-------------Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~-~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
....+....|+|+ ++.|+-... ...|.+.++..+.. ......+.+.. ..+....
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~--------D~~v~lwd~~~~~~~~~~~~~l~~H~----~~V~~v~ 211 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------DNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVA 211 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEET--------TSCEEEEEEETTTTEEEEEEEECCCS----SCEEEEE
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcC--------CCcEEEEEEcCCCceEEEEEEecCCC----CceEEEE
Confidence 3334566789997 456653331 23577777764221 11122344433 4678899
Q ss_pred ECcCC---cEEEEEeCCCCeeeEEEEeccCCee-EeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEE
Q 008927 308 WSSKG---ELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYL 383 (548)
Q Consensus 308 wspDG---~L~~~sd~~~g~~~Ly~~d~~~g~~-~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L 383 (548)
|+||+ ++++.... ++.-.||.++...+.. ..+... .......| ...|.| +++.| ++...++.-+|
T Consensus 212 ~sp~~~~~~~las~s~-D~~v~iWd~~~~~~~~~~~~~~~-~~~~~~v~-----~~~~s~---~g~~l-as~~~D~~v~l 280 (297)
T 2pm7_B 212 WSPTVLLRSYMASVSQ-DRTCIIWTQDNEQGPWKKTLLKE-EKFPDVLW-----RASWSL---SGNVL-ALSGGDNKVTL 280 (297)
T ss_dssp ECCCCSSSEEEEEEET-TSCEEEEEESSTTSCCEEEESSS-SCCSSCEE-----EEEECS---SSCCE-EEEETTSCEEE
T ss_pred ECCCCCCceEEEEEEC-CCcEEEEEeCCCCCccceeeeec-ccCCCcEE-----EEEECC---CCCEE-EEEcCCCcEEE
Confidence 99996 44444444 5555555443221221 122210 11111112 245654 55554 45566777777
Q ss_pred EEEECCCCceEe
Q 008927 384 GILDDFGHSLSL 395 (548)
Q Consensus 384 ~~~dl~~g~~~~ 395 (548)
|..+.. |.++.
T Consensus 281 w~~~~~-g~w~~ 291 (297)
T 2pm7_B 281 WKENLE-GKWEP 291 (297)
T ss_dssp EEECTT-SCEEE
T ss_pred EEECCC-CcEEe
Confidence 776643 44443
No 185
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.07 E-value=0.00032 Score=78.29 Aligned_cols=201 Identities=11% Similarity=0.075 Sum_probs=117.2
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCC--CCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~--~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
|.+.++.|||++...++|+++++++.. +..+.+.... ......+++++.++.|++. ... ...|++++
T Consensus 431 ~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~---l~~P~GLAvD~~~~~LY~t-D~~-------~~~I~v~~ 499 (791)
T 3m0c_C 431 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---IQAPDGLAVDWIHSNIYWT-DSV-------LGTVSVAD 499 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSS---CSCCCEEEEETTTTEEEEE-ETT-------TTEEEEEE
T ss_pred ecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC---CCCcceeeeeecCCcEEEE-ecC-------CCeEEEEe
Confidence 434467899998878899999998620 1233333210 1223456788888887664 322 25899999
Q ss_pred CCCCCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCc
Q 008927 228 LNGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 228 l~~g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~ 306 (548)
+++.. .+.|... ...-...++.|.+.+|+|..|.. ...|+++++++ .. ...++...- .....+
T Consensus 500 ldG~~---~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~------~~~I~~~~~dG--~~-~~~lv~~~l----~~P~GL 563 (791)
T 3m0c_C 500 TKGVK---RKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNG--VD-IYSLVTENI----QWPNGI 563 (791)
T ss_dssp TTSSS---EEEEEECTTCCEEEEEEETTTTEEEEEECSS------SCEEEEEETTS--CC-EEEEECSSC----SCEEEE
T ss_pred CCCCe---EEEEEeCCCCCcceEEEecCCCCEEEecCCC------CCeEEEEecCC--Cc-eEEEEeCCC----CCceEE
Confidence 99877 6666542 22334568899988898876432 25799999873 21 123333221 234556
Q ss_pred eECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 307 KWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 307 ~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
+.++++..+|++|. +...|+++++++...+.+.........| + .+++ .+++||++- .....|+++
T Consensus 564 avD~~~~~LYwaD~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P---~---glav-----~~~~lYwtD--~~~~~I~~~ 628 (791)
T 3m0c_C 564 TLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHP---F---SLAV-----FEDKVFWTD--IINEAIFSA 628 (791)
T ss_dssp EEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSE---E---EEEE-----ETTEEEEEE--TTTTEEEEE
T ss_pred EEecCCCeEEEEeC--CCCcEEEEecCCCceEEEecCCCccCCC---C---EEEE-----eCCEEEEEE--CCCCEEEEE
Confidence 77777664444554 3357999999776665554321111111 1 1223 456777653 344578888
Q ss_pred ECCCCc
Q 008927 387 DDFGHS 392 (548)
Q Consensus 387 dl~~g~ 392 (548)
|..+|+
T Consensus 629 dk~tG~ 634 (791)
T 3m0c_C 629 NRLTGS 634 (791)
T ss_dssp ETTTCC
T ss_pred eCCCCc
Confidence 876664
No 186
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.07 E-value=0.0012 Score=65.71 Aligned_cols=201 Identities=10% Similarity=-0.051 Sum_probs=107.9
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| +..++ ... .++...||..... ...+.+......+. .-+|+|++..|+- ...++.|
T Consensus 77 ~~V~~~~~~~~~~~l~-s~s---~D~~v~lwd~~~~--~~~~~~~~h~~~v~-------~v~~sp~~~~l~s-~~~d~~i 142 (343)
T 2xzm_R 77 HFVSDLALSQENCFAI-SSS---WDKTLRLWDLRTG--TTYKRFVGHQSEVY-------SVAFSPDNRQILS-AGAEREI 142 (343)
T ss_dssp SCEEEEEECSSTTEEE-EEE---TTSEEEEEETTSS--CEEEEEECCCSCEE-------EEEECSSTTEEEE-EETTSCE
T ss_pred CceEEEEECCCCCEEE-EEc---CCCcEEEEECCCC--cEEEEEcCCCCcEE-------EEEECCCCCEEEE-EcCCCEE
Confidence 4566778888 55443 322 2577777866432 12223322211111 1256777776654 3456777
Q ss_pred EEEeCCCCCCCceecCCCCCCCCceecceeeCCCC----------CEEEEEEeccCCCCCCceeEEEEEECCCCCccCcE
Q 008927 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRF----------NRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPK 237 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG----------~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~ 237 (548)
.+.++.+ .....+..... .........|+|++ ..|+....+ ..|.++|..... ..
T Consensus 143 ~~wd~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d---------~~i~iwd~~~~~---~~ 207 (343)
T 2xzm_R 143 KLWNILG--ECKFSSAEKEN-HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD---------GRLKVWNTNFQI---RY 207 (343)
T ss_dssp EEEESSS--CEEEECCTTTS-CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT---------SEEEEEETTTEE---EE
T ss_pred EEEeccC--CceeeeecccC-CCceeeeeeeccccccccccCCCCCEEEEEcCC---------CEEEEEcCCCce---eE
Confidence 7777764 32222221100 11234456788887 455544332 357777854332 33
Q ss_pred EeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEE
Q 008927 238 VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFV 317 (548)
Q Consensus 238 ~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~ 317 (548)
.+......+....|||||++|+-... ...|.+.|+...+. ....+... ..+....|+||++++..
T Consensus 208 ~~~~h~~~v~~~~~s~~g~~l~sgs~--------dg~v~iwd~~~~~~--~~~~~~~~-----~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 208 TFKAHESNVNHLSISPNGKYIATGGK--------DKKLLIWDILNLTY--PQREFDAG-----STINQIAFNPKLQWVAV 272 (343)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEET--------TCEEEEEESSCCSS--CSEEEECS-----SCEEEEEECSSSCEEEE
T ss_pred EEcCccccceEEEECCCCCEEEEEcC--------CCeEEEEECCCCcc--cceeecCC-----CcEEEEEECCCCCEEEE
Confidence 33333445677899999999874441 35688889853332 12223221 34678899999985544
Q ss_pred EeCCCCeeeEEEEeccCCee
Q 008927 318 TDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~g~~ 337 (548)
... + .+..+++.+++.
T Consensus 273 ~~d--~--~v~iw~~~~~~~ 288 (343)
T 2xzm_R 273 GTD--Q--GVKIFNLMTQSK 288 (343)
T ss_dssp EES--S--CEEEEESSSCCS
T ss_pred ECC--C--CEEEEEeCCCCC
Confidence 432 2 266667666543
No 187
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=98.06 E-value=8.3e-06 Score=81.40 Aligned_cols=70 Identities=20% Similarity=0.129 Sum_probs=54.7
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhc-CcEEEEeCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGSTG 537 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asr-GyaVl~~NyRGStG 537 (548)
..+.+++++. +| +|.+++|.|.+ .++.|+||++|||... .....|......|+.+ ||.|+.+||||+..
T Consensus 64 ~~~~~~i~~~-~~-~i~~~iy~P~~-------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~ 134 (323)
T 3ain_A 64 KIEDITIPGS-ET-NIKARVYYPKT-------QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPE 134 (323)
T ss_dssp EEEEEEEECS-SS-EEEEEEEECSS-------CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred EEEEEEecCC-CC-eEEEEEEecCC-------CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCC
Confidence 4577888886 77 89999999953 2457999999999843 3444566677788864 99999999999876
Q ss_pred C
Q 008927 538 L 538 (548)
Q Consensus 538 y 538 (548)
+
T Consensus 135 ~ 135 (323)
T 3ain_A 135 N 135 (323)
T ss_dssp S
T ss_pred C
Confidence 4
No 188
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=98.06 E-value=5.4e-06 Score=88.95 Aligned_cols=79 Identities=16% Similarity=0.276 Sum_probs=58.3
Q ss_pred CccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc---cc--------------cCcc----Ch
Q 008927 457 YFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS---EA--------------RGIL----NL 515 (548)
Q Consensus 457 ~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~---~~--------------~~~~----~~ 515 (548)
.+...+.++++.+ ||.+|++++|.|++ .+++|+||..||--.. .+ ..++ .+
T Consensus 37 ~~~~~~~v~i~~~-DG~~L~a~l~~P~~-------~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 108 (560)
T 3iii_A 37 EMIMEKDGTVEMR-DGEKLYINIFRPNK-------DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESP 108 (560)
T ss_dssp EEEEEEEEEEECT-TSCEEEEEEEECSS-------SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSC
T ss_pred ceEEEEEEEEECC-CCcEEEEEEEecCC-------CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCC
Confidence 3445678999998 99999999999964 3578999998852211 01 0011 13
Q ss_pred HHHHHHhcCcEEEEeCCCCCCCCChhhh
Q 008927 516 SIQYWTSRGWAFVDVNYGGSTGLSSVPS 543 (548)
Q Consensus 516 ~~Q~~asrGyaVl~~NyRGStGyG~~f~ 543 (548)
..++|+++||+|+.+|+||+.+.+-.|.
T Consensus 109 ~~~~la~~Gy~vv~~D~RG~G~S~G~~~ 136 (560)
T 3iii_A 109 DPGFWVPNDYVVVKVALRGSDKSKGVLS 136 (560)
T ss_dssp CHHHHGGGTCEEEEEECTTSTTCCSCBC
T ss_pred CHHHHHhCCCEEEEEcCCCCCCCCCccc
Confidence 4799999999999999999988766553
No 189
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=98.06 E-value=6.9e-06 Score=81.73 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=55.4
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccChHHHHHH-hcCcEEEEeCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGSTG 537 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~~~~Q~~a-srGyaVl~~NyRGStG 537 (548)
..+.+++++. ||.+|++++|.|.+ ++.|+||++|||.... ....+......|+ ..||+|+.+|||++.+
T Consensus 59 ~~~~~~i~~~-~G~~i~~~~~~P~~--------~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~ 129 (317)
T 3qh4_A 59 AVADDVVTGE-AGRPVPVRIYRAAP--------TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPE 129 (317)
T ss_dssp EEEEEEEECT-TSCEEEEEEEECSC--------SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred eEEEEEecCC-CCCeEEEEEEecCC--------CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 4577889997 99999999999953 3579999999987533 3334555667777 4599999999999987
Q ss_pred CC
Q 008927 538 LS 539 (548)
Q Consensus 538 yG 539 (548)
+.
T Consensus 130 ~~ 131 (317)
T 3qh4_A 130 HP 131 (317)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 190
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=98.05 E-value=4.7e-06 Score=81.84 Aligned_cols=71 Identities=18% Similarity=0.302 Sum_probs=55.9
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhcCcEEEEeCCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asrGyaVl~~NyRGStGy 538 (548)
..+.+++++. ||.+|+++++.|.+ .++.|+||++||++.. .. .+ .....|+++||.|+.+||||....
T Consensus 55 ~~~~~~~~~~-~g~~i~~~~~~P~~-------~~~~p~vv~~HG~~~~~~~--~~-~~~~~l~~~g~~v~~~d~rg~g~s 123 (318)
T 1l7a_A 55 KVYRLTYKSF-GNARITGWYAVPDK-------EGPHPAIVKYHGYNASYDG--EI-HEMVNWALHGYATFGMLVRGQQRS 123 (318)
T ss_dssp EEEEEEEEEG-GGEEEEEEEEEESS-------CSCEEEEEEECCTTCCSGG--GH-HHHHHHHHTTCEEEEECCTTTSSS
T ss_pred EEEEEEEEcc-CCCEEEEEEEeeCC-------CCCccEEEEEcCCCCCCCC--Cc-ccccchhhCCcEEEEecCCCCCCC
Confidence 4578889997 99999999999964 2467999999999865 32 12 234578999999999999998776
Q ss_pred Chh
Q 008927 539 SSV 541 (548)
Q Consensus 539 G~~ 541 (548)
+..
T Consensus 124 ~~~ 126 (318)
T 1l7a_A 124 EDT 126 (318)
T ss_dssp CCC
T ss_pred CCc
Confidence 544
No 191
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=98.05 E-value=3.5e-06 Score=81.52 Aligned_cols=75 Identities=16% Similarity=0.029 Sum_probs=52.7
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC-ccChHHHHHHhcCcEEEEeCC--CCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNY--GGSTGL 538 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~-~~~~~~Q~~asrGyaVl~~Ny--RGStGy 538 (548)
+.+++.+..+|.++...+|.|.+ ++ .+++|+||++||++...... .+....++++++||+|+.+|+ ||..+.
T Consensus 17 ~~~~~~s~~~~~~~~~~v~~P~~--~~---~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~ 91 (282)
T 3fcx_A 17 KVFEHDSVELNCKMKFAVYLPPK--AE---TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91 (282)
T ss_dssp EEEEEEETTTTEEEEEEEEECGG--GG---TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC-
T ss_pred EEEEEEchhcCCeeEEEEEcCCC--CC---CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccc
Confidence 44555543378999999999964 32 36789999999997654322 112235889999999999999 998876
Q ss_pred Chh
Q 008927 539 SSV 541 (548)
Q Consensus 539 G~~ 541 (548)
|..
T Consensus 92 ~~~ 94 (282)
T 3fcx_A 92 GED 94 (282)
T ss_dssp ---
T ss_pred ccc
Confidence 644
No 192
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.05 E-value=0.0028 Score=62.07 Aligned_cols=282 Identities=13% Similarity=0.075 Sum_probs=145.3
Q ss_pred CCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCC----cccCCCCCCccccceeeCCeeeEEECCEEEEEeC
Q 008927 88 SKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP----SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNY 162 (548)
Q Consensus 88 ~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~----~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~ 162 (548)
...+..++++| ++.++..... +|...||.+.... ... +.+......+. .-.|++++..|+ +..
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~---D~~i~vWd~~~~~-~~~~~~~~~l~~h~~~V~-------~~~~s~dg~~l~-s~~ 105 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASR---DKTIIMWKLTRDE-TNYGIPQRALRGHSHFVS-------DVVISSDGQFAL-SGS 105 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEET---TSCEEEEEECCSS-SCSEEEEEEECCCSSCEE-------EEEECTTSSEEE-EEE
T ss_pred cCCEEEEEEeCCCCCEEEEEcC---CCeEEEEECCCCC-cccceeeEEEeCCCCCEE-------EEEECCCCCEEE-EEc
Confidence 34577788998 6666555433 5777888775431 010 11111111111 124556665554 444
Q ss_pred CCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee-
Q 008927 163 KDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV- 240 (548)
Q Consensus 163 ~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~- 240 (548)
.++.|+..+... .... ..... ........++++++.|+....+ ..+.++|+.+.. ...+.
T Consensus 106 ~d~~i~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~l~s~s~d---------~~~~~~d~~~~~---~~~~~~ 167 (340)
T 4aow_A 106 WDGTLRLWDLTT--GTTTRRFVGH----TKDVLSVAFSSDNRQIVSGSRD---------KTIKLWNTLGVC---KYTVQD 167 (340)
T ss_dssp TTSEEEEEETTT--TEEEEEEECC----SSCEEEEEECTTSSCEEEEETT---------SCEEEECTTSCE---EEEECS
T ss_pred ccccceEEeecc--cceeeeecCC----CCceeEEEEeecCccceeecCC---------CeEEEEEeCCCc---eEEEEe
Confidence 677788777765 3222 22221 1223445689999887765433 246667776654 22222
Q ss_pred e-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEe
Q 008927 241 S-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 319 (548)
Q Consensus 241 ~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd 319 (548)
. ..+......|++++....++.-.. ...|.+.++.. ++ ....+.+.. ..+....|+|||++++...
T Consensus 168 ~~~~~~v~~~~~~~~~~~~~~~s~~~------d~~i~i~d~~~-~~--~~~~~~~h~----~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 168 ESHSEWVSCVRFSPNSSNPIIVSCGW------DKLVKVWNLAN-CK--LKTNHIGHT----GYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp SSCSSCEEEEEECSCSSSCEEEEEET------TSCEEEEETTT-TE--EEEEECCCS----SCEEEEEECTTSSEEEEEE
T ss_pred ccccCcccceEEccCCCCcEEEEEcC------CCEEEEEECCC-Cc--eeeEecCCC----CcEEEEEECCCCCEEEEEe
Confidence 1 233455668898876544343221 24588888874 43 233344433 4577789999999666654
Q ss_pred CCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecC
Q 008927 320 RKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDI 398 (548)
Q Consensus 320 ~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~ 398 (548)
. +| .|.++|+.+++........ .+ .....+. +++.++... .++ .|.++|++++... .+..
T Consensus 235 ~-Dg--~i~iwd~~~~~~~~~~~~~----~~-----v~~~~~~----~~~~~~~~~-~d~--~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 235 K-DG--QAMLWDLNEGKHLYTLDGG----DI-----INALCFS----PNRYWLCAA-TGP--SIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp T-TC--EEEEEETTTTEEEEEEECS----SC-----EEEEEEC----SSSSEEEEE-ETT--EEEEEETTTTEEEEEECC
T ss_pred C-CC--eEEEEEeccCceeeeecCC----ce-----EEeeecC----CCCceeecc-CCC--EEEEEECCCCeEEEeccc
Confidence 4 44 4666777666543322111 11 1123344 334454433 344 3566787766432 2221
Q ss_pred C---------CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 399 P---------FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 399 ~---------~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+ ...+..+ +++++.|+ +++.. ..|+++|+++|+
T Consensus 296 ~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~D---g~v~iW~~~tGt 339 (340)
T 4aow_A 296 EVISTSSKAEPPQCTSLAWSADGQTLF-AGYTD---NLVRVWQVTIGT 339 (340)
T ss_dssp C-------CCCCCEEEEEECTTSSEEE-EEETT---SCEEEEEEEC--
T ss_pred cceeeeccCCCCCEEEEEECCCCCEEE-EEeCC---CEEEEEeCCCcC
Confidence 1 1224433 56776554 44332 467778877764
No 193
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=98.04 E-value=3.5e-06 Score=85.50 Aligned_cols=71 Identities=17% Similarity=0.139 Sum_probs=54.3
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccc-cC--ccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RG--ILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~-~~--~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
.+.+++++. +|..+++++|.|.+. .++.|+||++|||..... .. .|....+.|+++||+|+.+||||..|
T Consensus 82 ~~~~~~~~~-~g~~l~~~v~~p~~~------~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg 154 (361)
T 1jkm_A 82 TSTETILGV-DGNEITLHVFRPAGV------EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWT 154 (361)
T ss_dssp EEEEEEECT-TSCEEEEEEEEETTC------CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEE
T ss_pred eeeeeeecC-CCCeEEEEEEeCCCC------CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCC
Confidence 356778887 888899999999641 236799999999984322 22 34556788999999999999999854
Q ss_pred C
Q 008927 538 L 538 (548)
Q Consensus 538 y 538 (548)
+
T Consensus 155 ~ 155 (361)
T 1jkm_A 155 A 155 (361)
T ss_dssp T
T ss_pred C
Confidence 3
No 194
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=98.04 E-value=6.2e-06 Score=82.78 Aligned_cols=70 Identities=24% Similarity=0.353 Sum_probs=55.7
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLS 539 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG 539 (548)
..+.++|++. ||.+|+++++.|++ .++.|+||++||++..... |. ....|+++||+|+.+|+||..+.+
T Consensus 81 ~~~~~~~~~~-~g~~l~~~~~~P~~-------~~~~p~vv~~HG~g~~~~~--~~-~~~~~~~~G~~v~~~D~rG~g~s~ 149 (346)
T 3fcy_A 81 ECYDLYFTGV-RGARIHAKYIKPKT-------EGKHPALIRFHGYSSNSGD--WN-DKLNYVAAGFTVVAMDVRGQGGQS 149 (346)
T ss_dssp EEEEEEEECG-GGCEEEEEEEEESC-------SSCEEEEEEECCTTCCSCC--SG-GGHHHHTTTCEEEEECCTTSSSSC
T ss_pred EEEEEEEEcC-CCCEEEEEEEecCC-------CCCcCEEEEECCCCCCCCC--hh-hhhHHHhCCcEEEEEcCCCCCCCC
Confidence 4578899997 99999999999964 2467999999999865432 33 334788999999999999987655
Q ss_pred h
Q 008927 540 S 540 (548)
Q Consensus 540 ~ 540 (548)
.
T Consensus 150 ~ 150 (346)
T 3fcy_A 150 Q 150 (346)
T ss_dssp C
T ss_pred C
Confidence 4
No 195
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=98.04 E-value=7.5e-06 Score=83.67 Aligned_cols=81 Identities=15% Similarity=0.139 Sum_probs=59.2
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc--------cC--hHHHHHHhcCcEEEE
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI--------LN--LSIQYWTSRGWAFVD 529 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~--------~~--~~~Q~~asrGyaVl~ 529 (548)
..+.++|.+..||.++++++|.|.+ ++ +++++|+||++|||+....... +. ....+.+.+|+.|+.
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~--~~--~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~ 218 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKD--VN--PDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLA 218 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSS--CC--TTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEE
T ss_pred cccceeeccCCCCcEEEEEEEcCCC--CC--CCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEE
Confidence 4567788873279999999999965 43 3678899999999986532211 11 122345577889999
Q ss_pred eCCCCCCCCChhhhh
Q 008927 530 VNYGGSTGLSSVPST 544 (548)
Q Consensus 530 ~NyRGStGyG~~f~~ 544 (548)
+|+||+.++|..|.+
T Consensus 219 pd~~g~~~~~~~~~~ 233 (380)
T 3doh_A 219 PQCPPNSSWSTLFTD 233 (380)
T ss_dssp ECCCTTCCSBTTTTC
T ss_pred ecCCCCCcccccccc
Confidence 999999999987764
No 196
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=98.03 E-value=9.2e-06 Score=82.63 Aligned_cols=77 Identities=17% Similarity=0.128 Sum_probs=53.1
Q ss_pred CCeEEEeeccCCCeEEEEEEEc-CCCCCC----------------CCCCCCCCcEEEEEccCccccccC---ccChHHHH
Q 008927 460 LPELIEFPTEVPGQKAYAYYYP-PSNPIY----------------QASPEEKPPLLVKSHGGPTSEARG---ILNLSIQY 519 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~-P~~~~~----------------~~~~~~~~Pliv~iHGGP~~~~~~---~~~~~~Q~ 519 (548)
..+.+++.+. || +...+|. |++.+- ..+.++++|+||++|||+...... .|....+.
T Consensus 63 ~~~dv~~~~~-~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~ 139 (365)
T 3ebl_A 63 SSFDHIIDQS-VG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRR 139 (365)
T ss_dssp EEEEEEEETT-TT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHH
T ss_pred ceeeEEecCC-CC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHH
Confidence 4577889887 88 6677776 864200 001246789999999998643222 24556788
Q ss_pred HHhc-CcEEEEeCCCCCCCCC
Q 008927 520 WTSR-GWAFVDVNYGGSTGLS 539 (548)
Q Consensus 520 ~asr-GyaVl~~NyRGStGyG 539 (548)
|+++ ||+|+.+|||++.++.
T Consensus 140 la~~~g~~Vv~~dyR~~p~~~ 160 (365)
T 3ebl_A 140 FVKLSKGVVVSVNYRRAPEHR 160 (365)
T ss_dssp HHHHHTSEEEEECCCCTTTSC
T ss_pred HHHHCCCEEEEeeCCCCCCCC
Confidence 8886 9999999999998754
No 197
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.03 E-value=0.00032 Score=72.58 Aligned_cols=198 Identities=8% Similarity=0.024 Sum_probs=109.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|.|.++.++.+...++.|.+.++..+ .....++... ....+..+.|+| |++.|+..+.| ..|.++|
T Consensus 126 ~~~P~~~~~lasGs~dg~i~lWd~~~~-~~~~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s~D---------~~v~iwd 193 (435)
T 4e54_B 126 AWHPTHPSTVAVGSKGGDIMLWNFGIK-DKPTFIKGIG--AGGSITGLKFNPLNTNQFYASSME---------GTTRLQD 193 (435)
T ss_dssp EECSSCTTCEEEEETTSCEEEECSSCC-SCCEEECCCS--SSCCCCEEEECSSCTTEEEEECSS---------SCEEEEE
T ss_pred EEeCCCCCEEEEEeCCCEEEEEECCCC-CceeEEEccC--CCCCEEEEEEeCCCCCEEEEEeCC---------CEEEEee
Confidence 566655555555556788888888762 2233333210 123466788998 67776554333 2477789
Q ss_pred CCCCCccCcEEeeecCC---ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 228 LNGQNIQEPKVLVSGSD---FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~---~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
++++. .+.+..... .+....|+|||+.|+... ....|++.+++. .. ...+.+.. ..+.
T Consensus 194 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~--------~dg~i~~wd~~~-~~---~~~~~~h~----~~v~ 254 (435)
T 4e54_B 194 FKGNI---LRVFASSDTINIWFCSLDVSASSRMVVTGD--------NVGNVILLNMDG-KE---LWNLRMHK----KKVT 254 (435)
T ss_dssp TTSCE---EEEEECCSSCSCCCCCEEEETTTTEEEEEC--------SSSBEEEEESSS-CB---CCCSBCCS----SCEE
T ss_pred ccCCc---eeEEeccCCCCccEEEEEECCCCCEEEEEe--------CCCcEeeeccCc-ce---eEEEeccc----ceEE
Confidence 98876 555543322 234568999999887432 135688889863 32 22233332 4577
Q ss_pred CceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEE
Q 008927 305 EPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 382 (548)
Q Consensus 305 ~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~ 382 (548)
...|+|+++ +++.... ++. |.++|+.+++.. .+.... ..... .....|.| +++.|+ +...++.
T Consensus 255 ~v~~~p~~~~~~~s~s~-d~~--v~iwd~~~~~~~~~~~~~~---~h~~~---v~~~~~sp---dg~~l~-s~~~D~~-- 319 (435)
T 4e54_B 255 HVALNPCCDWFLATASV-DQT--VKIWDLRQVRGKASFLYSL---PHRHP---VNAACFSP---DGARLL-TTDQKSE-- 319 (435)
T ss_dssp EEEECTTCSSEEEEEET-TSB--CCEEETTTCCSSSCCSBCC---BCSSC---EEECCBCT---TSSEEE-EEESSSC--
T ss_pred eeeecCCCceEEEEecC-cce--eeEEecccccccceEEEee---ecccc---ccceeECC---CCCeeE-EEcCCCE--
Confidence 889999998 7766554 454 444565444321 111100 01111 11234554 666554 4555554
Q ss_pred EEEEECCCCc
Q 008927 383 LGILDDFGHS 392 (548)
Q Consensus 383 L~~~dl~~g~ 392 (548)
|.++|+.+++
T Consensus 320 i~iwd~~~~~ 329 (435)
T 4e54_B 320 IRVYSASQWD 329 (435)
T ss_dssp EEEEESSSSS
T ss_pred EEEEECCCCc
Confidence 5566777665
No 198
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.03 E-value=3.5e-05 Score=85.19 Aligned_cols=202 Identities=12% Similarity=0.097 Sum_probs=114.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCC--CCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKD--SSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~--~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+|.+.++.|||++...++|+++++++.. ...+.+... .......+++++.++.|++. ... ...|+++
T Consensus 412 a~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~---~~~~P~glavD~~~g~LY~t-D~~-------~~~I~v~ 480 (699)
T 1n7d_A 412 DTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---DIQAPDGLAVDWIHSNIYWT-DSV-------LGTVSVA 480 (699)
T ss_dssp EEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS---CC--CCCEECCCSSSBCEEC-CTT-------TSCEEEE
T ss_pred ccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC---CCCCcceEEEEeeCCcEEEE-ecc-------CCeEEEE
Confidence 5555577899998777899999997510 122222211 01123356677666666553 221 2469999
Q ss_pred ECCCCCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcC
Q 008927 227 ALNGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTE 305 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~ 305 (548)
++++.. .+.|... ...-...+++|++.+|+|..+.. ...|++++++ |.. ...++...- .....
T Consensus 481 d~dg~~---~~~l~~~~~~~P~giavDp~~g~ly~td~~~------~~~I~~~~~d--G~~-~~~l~~~~l----~~PnG 544 (699)
T 1n7d_A 481 DTKGVK---RKTLFREQGSKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLN--GVD-IYSLVTENI----QWPNG 544 (699)
T ss_dssp BSSSCC---EEEECCCSSCCCCCEECCSSSSCCEECCCSS------SCCEEBCCSS--SCC-CCEESCSSC----SSCCC
T ss_pred ecCCCc---eEEEEeCCCCCcceEEEccCCCcEEEcccCC------CCeEEEEeCC--CCC-eeEEEeCCC----CCccE
Confidence 998876 5555432 12233457899888887654321 2578888876 321 122222211 34567
Q ss_pred ceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEE
Q 008927 306 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (548)
Q Consensus 306 ~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~ 384 (548)
++|+|+++ ||+ +|. +...|+++++++...+.+.........| .+ +++ +++.||++. -+...|+
T Consensus 545 lavd~~~~~LY~-aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P---~g---lav-----d~~~lywtd--~~~~~V~ 608 (699)
T 1n7d_A 545 ITLDLLSGRLYW-VDS--KLHSISSIDVNGGNRKTILEDEKRLAHP---FS---LAV-----FEDKVFWTD--IINEAIF 608 (699)
T ss_dssp EEECTTTCCEEE-EET--TTTEEEEECSSSSCCEEECCCSSSCSSC---CC---CEE-----ETTEEEEEC--STTTCEE
T ss_pred EEEeccCCEEEE-Eec--CCCeEEEEccCCCceEEEEecCCcCCCc---eE---eEE-----ECCEEEEEe--CCCCeEE
Confidence 89999977 555 554 3357999998765555554221111111 11 233 456777654 2345678
Q ss_pred EEECCCCce
Q 008927 385 ILDDFGHSL 393 (548)
Q Consensus 385 ~~dl~~g~~ 393 (548)
+++..+|+.
T Consensus 609 ~~d~~~G~~ 617 (699)
T 1n7d_A 609 SANRLTGSD 617 (699)
T ss_dssp EEETTTEEE
T ss_pred EEEccCCCc
Confidence 888766654
No 199
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=98.02 E-value=6.3e-06 Score=77.53 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=53.9
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCCh
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSS 540 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~ 540 (548)
.+.+++++ +|.+++++++.|.+. .++.|+||++||..... ..+....+.|+++||.|+.+|+||..|...
T Consensus 6 ~~~~~~~~--~~~~~~~~~~~p~~~------~~~~p~vv~~HG~~g~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~ 75 (241)
T 3f67_A 6 AGETSIPS--QGENMPAYHARPKNA------DGPLPIVIVVQEIFGVH--EHIRDLCRRLAQEGYLAIAPELYFRQGDPN 75 (241)
T ss_dssp EEEEEEEE--TTEEEEEEEEEETTC------CSCEEEEEEECCTTCSC--HHHHHHHHHHHHTTCEEEEECTTTTTCCGG
T ss_pred eeeEEEec--CCcceEEEEecCCCC------CCCCCEEEEEcCcCccC--HHHHHHHHHHHHCCcEEEEecccccCCCCC
Confidence 46788887 789999999999641 34679999999954322 335566788999999999999988766544
No 200
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.01 E-value=0.00014 Score=74.89 Aligned_cols=163 Identities=6% Similarity=-0.039 Sum_probs=85.2
Q ss_pred CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE-------EcCCCCCcccCCcCceECcCC-cEE
Q 008927 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC-------VAGFDPTIVESPTEPKWSSKG-ELF 315 (548)
Q Consensus 244 ~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~-------l~~~~~~~~~~~~~~~wspDG-~L~ 315 (548)
..+....|+|||+.|+- . . ...|.+.++...+. .... +.+.. ..+....|+|+| +++
T Consensus 178 ~~v~~~~~~~~~~~l~s-~-~-------d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~----~~v~~~~~~p~~~~~l 242 (447)
T 3dw8_B 178 YHINSISINSDYETYLS-A-D-------DLRINLWHLEITDR--SFNIVDIKPANMEELT----EVITAAEFHPNSCNTF 242 (447)
T ss_dssp SCCCEEEECTTSSEEEE-E-C-------SSEEEEEETTEEEE--EEEEEECCCSSGGGCC----CCEEEEEECSSCTTEE
T ss_pred cceEEEEEcCCCCEEEE-e-C-------CCeEEEEECCCCCc--eeeeeecccccccccC----cceEEEEECCCCCcEE
Confidence 34567789999998873 3 2 24688888863222 1121 11222 456788999999 666
Q ss_pred EEEeCCCCeeeEEEEeccCCee-----EeecccccccCCCc----ccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 316 FVTDRKNGFWNLHKWIESNNEV-----LAIYSLDAEFSRPL----WVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 316 ~~sd~~~g~~~Ly~~d~~~g~~-----~~l~~~~~d~~~p~----w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
+.... +| .|..+|+.+++. +.+... .+..... .........|.| +++.|+ +... ..|.++
T Consensus 243 ~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~---~g~~l~-~~~~---~~v~iw 311 (447)
T 3dw8_B 243 VYSSS-KG--TIRLCDMRASALCDRHSKLFEEP-EDPSNRSFFSEIISSISDVKFSH---SGRYMM-TRDY---LSVKVW 311 (447)
T ss_dssp EEEET-TS--CEEEEETTTCSSSCTTCEEECCC------CCHHHHHTTCEEEEEECT---TSSEEE-EEES---SEEEEE
T ss_pred EEEeC-CC--eEEEEECcCCccccceeeEeccC-CCccccccccccCceEEEEEECC---CCCEEE-EeeC---CeEEEE
Confidence 66554 44 466677766653 222211 0000000 000122345654 666555 3333 456777
Q ss_pred ECCC-Cc-eEeecCCCcee-----------------EeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 387 DDFG-HS-LSLLDIPFTDI-----------------DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 387 dl~~-g~-~~~l~~~~~~~-----------------~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
|+.. ++ +..+....... -.++++++.| ++++. ...|+++|+.+++.
T Consensus 312 d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~---dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 312 DLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSY---NNFFRMFDRNTKRD 376 (447)
T ss_dssp ETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECS---TTEEEEEETTTCCE
T ss_pred eCCCCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEecc---CCEEEEEEcCCCcc
Confidence 8765 43 22332211100 1236777766 33332 36799999988764
No 201
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.00085 Score=66.80 Aligned_cols=155 Identities=8% Similarity=-0.031 Sum_probs=89.0
Q ss_pred eeEE--ECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 149 AFRI--FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 149 ~~~~--~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
.|.+ +++.++- ...++.|.+.++.. ++...+.... ....+....|+|||+.|+....+ ..|.++
T Consensus 132 ~~~~~~~~~~l~s-~s~dg~i~~wd~~~--~~~~~~~~~~--~~~~i~~~~~~pdg~~lasg~~d---------g~i~iw 197 (343)
T 3lrv_A 132 YGHNEVNTEYFIW-ADNRGTIGFQSYED--DSQYIVHSAK--SDVEYSSGVLHKDSLLLALYSPD---------GILDVY 197 (343)
T ss_dssp ECCC---CCEEEE-EETTCCEEEEESSS--SCEEEEECCC--SSCCCCEEEECTTSCEEEEECTT---------SCEEEE
T ss_pred EcCCCCCCCEEEE-EeCCCcEEEEECCC--CcEEEEEecC--CCCceEEEEECCCCCEEEEEcCC---------CEEEEE
Confidence 4556 5555543 44677888888876 5554433221 12236677899999987664322 368889
Q ss_pred ECCCCCccCc-EEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 227 ALNGQNIQEP-KVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 227 dl~~g~~~~~-~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
|+.+++. . ..+.. ....+....|||||++|+-.. + . .|.+.|+.....+.....+.... ..+.
T Consensus 198 d~~~~~~--~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~-------~-~v~iwd~~~~~~~~~~~~~~~~~----~~~~ 262 (343)
T 3lrv_A 198 NLSSPDQ--ASSRFPVDEEAKIKEVKFADNGYWMVVEC-D-------Q-TVVCFDLRKDVGTLAYPTYTIPE----FKTG 262 (343)
T ss_dssp ESSCTTS--CCEECCCCTTSCEEEEEECTTSSEEEEEE-S-------S-BEEEEETTSSTTCBSSCCCBC---------C
T ss_pred ECCCCCC--CccEEeccCCCCEEEEEEeCCCCEEEEEe-C-------C-eEEEEEcCCCCcceeeccccccc----cccc
Confidence 9998872 2 34443 345577889999999888544 2 2 68888987532211111111111 1222
Q ss_pred --CceECcCCcEEEEEeCCCCeeeEEEEec
Q 008927 305 --EPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (548)
Q Consensus 305 --~~~wspDG~L~~~sd~~~g~~~Ly~~d~ 332 (548)
...|+|||+++++...+++.-.||.++.
T Consensus 263 ~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 3899999994444322145556666543
No 202
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=98.00 E-value=9.2e-06 Score=80.20 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=55.2
Q ss_pred ccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhc-CcEEEEeCCCCC
Q 008927 458 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSR-GWAFVDVNYGGS 535 (548)
Q Consensus 458 ~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asr-GyaVl~~NyRGS 535 (548)
....+.+++++. +| ++++++|.|.+ +++.|+||++|||... .....|....+.|+.+ ||.|+.+||||.
T Consensus 45 ~~~~~~~~i~~~-~g-~i~~~~~~p~~-------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~ 115 (311)
T 2c7b_A 45 IAETRDVHIPVS-GG-SIRARVYFPKK-------AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLA 115 (311)
T ss_dssp CSEEEEEEEEET-TE-EEEEEEEESSS-------CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCT
T ss_pred cceEEEEEecCC-CC-cEEEEEEecCC-------CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCC
Confidence 335678889987 77 89999999953 2346999999999732 2223455667788886 999999999998
Q ss_pred CCCC
Q 008927 536 TGLS 539 (548)
Q Consensus 536 tGyG 539 (548)
....
T Consensus 116 g~~~ 119 (311)
T 2c7b_A 116 PEYK 119 (311)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 7653
No 203
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.99 E-value=0.0004 Score=69.78 Aligned_cols=193 Identities=9% Similarity=0.022 Sum_probs=108.8
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEEC-CEEEEEeCCCCe
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFG-DTVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~-~~i~F~~~~~~~ 166 (548)
..+..+.++| +..++-.. .+|...||..... ...+.+......+. .-.|+++. +.++++...++.
T Consensus 155 ~~v~~~~~~~~~~~l~t~s----~D~~v~lwd~~~~--~~~~~~~~h~~~v~-------~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTAS----GDGTCALWDVESG--QLLQSFHGHGADVL-------CLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp SCEEEEEECSSSSEEEEEE----TTSEEEEEETTTC--CEEEEEECCSSCEE-------EEEECCCSSCCEEEEEETTSC
T ss_pred CcEEEEEEeCCCCEEEEEe----CCCcEEEEeCCCC--eEEEEEcCCCCCeE-------EEEEEeCCCCCEEEEEeCCCe
Confidence 3456677787 55554332 2466677765332 11222221111110 01344432 345555556788
Q ss_pred EEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCC-
Q 008927 167 LYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSD- 244 (548)
Q Consensus 167 Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~- 244 (548)
|.+.++.. ++.. .+... ...+....|+|+|+.|+....+ ..|.++|+.+++ ...+.....
T Consensus 222 v~~wd~~~--~~~~~~~~~h----~~~v~~v~~~p~~~~l~s~s~D---------~~v~lwd~~~~~---~~~~~~~~~~ 283 (354)
T 2pbi_B 222 AMVWDMRS--GQCVQAFETH----ESDVNSVRYYPSGDAFASGSDD---------ATCRLYDLRADR---EVAIYSKESI 283 (354)
T ss_dssp EEEEETTT--CCEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SCEEEEETTTTE---EEEEECCTTC
T ss_pred EEEEECCC--CcEEEEecCC----CCCeEEEEEeCCCCEEEEEeCC---------CeEEEEECCCCc---EEEEEcCCCc
Confidence 88889876 4443 33322 2345677899999987765433 257778988775 333332221
Q ss_pred --ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCC
Q 008927 245 --FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKN 322 (548)
Q Consensus 245 --~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~ 322 (548)
......|||||+.|+-.. . ...|.+.|+.. ++ ....+.+.. ..+....|+|||++++.... +
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~-~-------d~~i~vwd~~~-~~--~~~~l~~h~----~~v~~l~~spdg~~l~sgs~-D 347 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGY-N-------DYTINVWDVLK-GS--RVSILFGHE----NRVSTLRVSPDGTAFCSGSW-D 347 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEE-T-------TSCEEEEETTT-CS--EEEEECCCS----SCEEEEEECTTSSCEEEEET-T
T ss_pred ccceeEEEEeCCCCEEEEEE-C-------CCcEEEEECCC-Cc--eEEEEECCC----CcEEEEEECCCCCEEEEEcC-C
Confidence 245678999999887433 2 34688889874 43 234454443 56788999999995445444 4
Q ss_pred CeeeEE
Q 008927 323 GFWNLH 328 (548)
Q Consensus 323 g~~~Ly 328 (548)
+.-.||
T Consensus 348 ~~v~vW 353 (354)
T 2pbi_B 348 HTLRVW 353 (354)
T ss_dssp SEEEEE
T ss_pred CCEEec
Confidence 544443
No 204
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.99 E-value=0.0045 Score=59.98 Aligned_cols=242 Identities=7% Similarity=-0.010 Sum_probs=127.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+++ +.|+... ++.|++-++.+ ++..++..... ....+....|+|+|+.|+....+ ..|.++|+
T Consensus 32 ~WS~~-~~lAvg~--D~tV~iWd~~t--g~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs~D---------g~v~iw~~ 96 (318)
T 4ggc_A 32 DWSSG-NVLAVAL--DNSVYLWSASS--GDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSS---------AEVQLWDV 96 (318)
T ss_dssp EECTT-SEEEEEE--TTEEEEEETTT--CCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETT---------SEEEEEET
T ss_pred EECCC-CEEEEEe--CCEEEEEECCC--CCEEEEEEecC-CCCeEEEEEECCCCCEEEEEECC---------CcEEEeec
Confidence 56644 3666655 66788878876 55543322110 12345678899999987765433 36888899
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
++++ ......+... ....++++++.|+-.. . ...+.+.+...... ....+.+.. ..+....|
T Consensus 97 ~~~~---~~~~~~~h~~-~~~~~~~~~~~l~s~~-~-------~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~ 158 (318)
T 4ggc_A 97 QQQK---RLRNMTSHSA-RVGSLSWNSYILSSGS-R-------SGHIHHHDVRVAEH--HVATLSGHS----QEVCGLRW 158 (318)
T ss_dssp TTTE---EEEEEECCSS-CEEEEEEETTEEEEEE-T-------TSEEEEEETTSSSC--EEEEEECCS----SCEEEEEE
T ss_pred CCce---eEEEecCccc-eEEEeecCCCEEEEEe-c-------CCceEeeecCCCce--eEEEEcCcc----CceEEEEE
Confidence 9887 4333333222 1224677788766333 1 23455555543221 223333332 44567789
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec-ccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY-SLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~-~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
+++|++++.... +|. |.++|+.+++..... ........+ .....+.+ ++..++..........+.+.|
T Consensus 159 ~~~~~~l~s~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~---~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 159 APDGRHLASGGN-DNL--VNVWPSAPGEGGWVPLQTFTQHQGA-----VKAVAWCP---WQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp CTTSSEEEEEET-TSC--EEEEESSCBTTBSCCSEEECCCCSC-----EEEEEECT---TSTTEEEEEECTTTCEEEEEE
T ss_pred cCCCCEEEEEec-Ccc--eeEEECCCCcccccceeeecccCCc-----eEEEEecC---CCCcEEEEEecCCCCEEEEEe
Confidence 999995555544 443 555666665422111 000000001 01123332 445555554434444566677
Q ss_pred CCCCceEeecCCCceeEe--eeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 388 DFGHSLSLLDIPFTDIDN--ITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 388 l~~g~~~~l~~~~~~~~~--~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
...+...........+.. +.++++.+++.... ....|+++|+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~--~d~~i~iwd~~~~~~ 276 (318)
T 4ggc_A 228 VCSGACLSAVDAHSQVCSILWSPHYKELISGHGF--AQNQLVIWKYPTMAK 276 (318)
T ss_dssp TTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT--TTCCEEEEETTTCCE
T ss_pred cccccccccccceeeeeeeeecccccceEEEEEc--CCCEEEEEECCCCcE
Confidence 776655433322222222 35677777655432 235788899887763
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.98 E-value=0.0017 Score=66.89 Aligned_cols=202 Identities=12% Similarity=0.062 Sum_probs=113.2
Q ss_pred cceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCc
Q 008927 194 ADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKA 273 (548)
Q Consensus 194 ~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~ 273 (548)
..++|+|+|+ |+++ ... ...|+++|++++. .+.+......-. +.|+|||+.|++..... ..
T Consensus 134 ~~la~d~~g~-lyv~-d~~-------~~~I~~id~~~g~---~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~------~~ 194 (409)
T 3hrp_A 134 WGIAAVGNNT-VLAY-QRD-------DPRVRLISVDDNK---VTTVHPGFKGGK-PAVTKDKQRVYSIGWEG------TH 194 (409)
T ss_dssp EEEEECSTTE-EEEE-ETT-------TTEEEEEETTTTE---EEEEEETCCBCB-CEECTTSSEEEEEBSST------TC
T ss_pred eEEEEeCCCC-EEEE-ecC-------CCcEEEEECCCCE---EEEeeccCCCCc-eeEecCCCcEEEEecCC------Cc
Confidence 3567999987 4443 332 2479999999987 666654433333 89999999876554221 22
Q ss_pred eEEEEEecCCCceeeeEEE----cCCCCCcccCCcCceECc-CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccC
Q 008927 274 ELWVGYISENGDVYKRVCV----AGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFS 348 (548)
Q Consensus 274 ~L~v~~~~~~g~~~~~~~l----~~~~~~~~~~~~~~~wsp-DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~ 348 (548)
.|++++.+. +.. ...+ .... .......++| +|.||+ ++. .+ .|++++++++..+.+..... ..
T Consensus 195 ~I~~~d~~~-~~~--~~~~g~~~~~~~----~~p~~iav~p~~g~lyv-~d~-~~--~I~~~d~~~~~~~~~~~~~~-~g 262 (409)
T 3hrp_A 195 TVYVYMKAS-GWA--PTRIGQLGSTFS----GKIGAVALDETEEWLYF-VDS-NK--NFGRFNVKTQEVTLIKQLEL-SG 262 (409)
T ss_dssp EEEEEEGGG-TTC--EEEEEECCTTSC----SCCCBCEECTTSSEEEE-ECT-TC--EEEEEETTTCCEEEEEECCC-CS
T ss_pred eEEEEEcCC-Cce--eEEeeeccchhc----CCcEEEEEeCCCCeEEE-EEC-CC--cEEEEECCCCCEEEEecccc-cC
Confidence 799999874 321 1222 2111 3456788999 555777 554 33 79999998776554421100 01
Q ss_pred CCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecC-C--------------CceeEee--eecCC
Q 008927 349 RPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDI-P--------------FTDIDNI--TLGND 411 (548)
Q Consensus 349 ~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~-~--------------~~~~~~~--s~d~~ 411 (548)
...|.+ .+...+.| +++.||++- .+...|++++.++. ...+.. . +..-.++ ++++.
T Consensus 263 ~~~~~P-~~~ia~~p---~~g~lyv~d--~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 263 SLGTNP-GPYLIYYF---VDSNFYMSD--QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp CCCCSS-CCEEEEET---TTTEEEEEE--TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred CCCCCc-cccEEEeC---CCCEEEEEe--CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 111110 01345653 567887653 34457888987643 443321 1 1112233 34444
Q ss_pred EEEEEEecCCCCCeEEEEEcCCCce
Q 008927 412 CLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 412 ~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
||+. .. .....|.++++.++.+
T Consensus 336 -lyva-d~-~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 336 -FYIV-DG-FKGYCLRKLDILDGYV 357 (409)
T ss_dssp -EEEE-ET-TTTCEEEEEETTTTEE
T ss_pred -EEEE-eC-CCCCEEEEEECCCCEE
Confidence 5554 32 0246788999766764
No 206
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=97.98 E-value=9.4e-06 Score=81.76 Aligned_cols=68 Identities=18% Similarity=0.161 Sum_probs=54.0
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccC-hHHHHHHhcCcEEEEeCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~-~~~Q~~asrGyaVl~~NyRGS 535 (548)
..+.++|++. ||.++++++|.|.+. +.++.|+||++||++.... .|. ...+.|+++||.|+.+|+||.
T Consensus 67 ~~~~~~~~~~-~g~~~~~~~~~p~~~-----~~~~~p~vv~~hG~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~ 135 (367)
T 2hdw_A 67 EHRKVTFANR-YGITLAADLYLPKNR-----GGDRLPAIVIGGPFGAVKE--QSSGLYAQTMAERGFVTLAFDPSYT 135 (367)
T ss_dssp EEEEEEEECT-TSCEEEEEEEEESSC-----CSSCEEEEEEECCTTCCTT--SHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred eeEEEEEecC-CCCEEEEEEEeCCCC-----CCCCCCEEEEECCCCCcch--hhHHHHHHHHHHCCCEEEEECCCCc
Confidence 5688999997 999999999999641 2456799999999875332 233 357889999999999999984
No 207
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.98 E-value=0.0031 Score=63.42 Aligned_cols=245 Identities=9% Similarity=0.026 Sum_probs=127.6
Q ss_pred eeEE-ECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCC---------CCCCCceecceeeCC-CCCEEEEEEeccCCCC
Q 008927 149 AFRI-FGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPD---------YGEPLVSYADGIFDP-RFNRYVTVREDRRQDA 216 (548)
Q Consensus 149 ~~~~-~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~---------~~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~ 216 (548)
.|++ ++..|+. ...++.|.+.++.. ++.. .+... .......+..+.|+| +++.|+....+
T Consensus 50 ~~s~~~~~~l~~-~~~dg~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d----- 121 (408)
T 4a11_B 50 DIEPVEGRYMLS-GGSDGVIVLYDLEN--SSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD----- 121 (408)
T ss_dssp EECTTTCCEEEE-EETTSCEEEEECCC--CSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-----
T ss_pred EEecCCCCEEEE-EcCCCeEEEEECCC--CcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-----
Confidence 4566 5555544 44567788878875 3221 11100 000123456778999 55555554322
Q ss_pred CCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCC---CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEc
Q 008927 217 LNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA 293 (548)
Q Consensus 217 ~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPD---Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~ 293 (548)
..|.++|+.+++ ...............|+|+ ++.|+... . ...|++.++.. ++ ....+.
T Consensus 122 ----~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~v~~~d~~~-~~--~~~~~~ 183 (408)
T 4a11_B 122 ----KTLKVWDTNTLQ---TADVFNFEETVYSHHMSPVSTKHCLVAVGT-R-------GPKVQLCDLKS-GS--CSHILQ 183 (408)
T ss_dssp ----SEEEEEETTTTE---EEEEEECSSCEEEEEECSSCSSCCEEEEEE-S-------SSSEEEEESSS-SC--CCEEEC
T ss_pred ----CeEEEeeCCCCc---cceeccCCCceeeeEeecCCCCCcEEEEEc-C-------CCeEEEEeCCC-cc--eeeeec
Confidence 468889999887 5444444444556677774 44666443 1 35689999974 43 234444
Q ss_pred CCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCe--eEeecccccccC------CCcccccCcceeeeee
Q 008927 294 GFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNE--VLAIYSLDAEFS------RPLWVFGINSYEIIQS 364 (548)
Q Consensus 294 ~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~--~~~l~~~~~d~~------~p~w~~~~~~~~~~~~ 364 (548)
... ..+..+.|+|+++ +++.... +|. |..+|+..++ ...+........ ............+.|
T Consensus 184 ~~~----~~v~~~~~~~~~~~ll~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 255 (408)
T 4a11_B 184 GHR----QEILAVSWSPRYDYILATASA-DSR--VKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS- 255 (408)
T ss_dssp CCC----SCEEEEEECSSCTTEEEEEET-TSC--EEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-
T ss_pred CCC----CcEEEEEECCCCCcEEEEEcC-CCc--EEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-
Confidence 433 4577889999999 7777665 554 5556654443 222211000000 000001112345654
Q ss_pred cCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCC------Cce--eEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 365 HGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP------FTD--IDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 365 ~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~------~~~--~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
+++.|+ +...++ .|.++|+.+++....... ... +......+..+++.... ..|.++|+.+++.
T Consensus 256 --~~~~l~-~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~v~d~~~~~~ 326 (408)
T 4a11_B 256 --DGLHLL-TVGTDN--RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG----STIAVYTVYSGEQ 326 (408)
T ss_dssp --TSSEEE-EEETTS--CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET----TEEEEEETTTCCE
T ss_pred --CCCEEE-EecCCC--eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC----CEEEEEECcCCcc
Confidence 555554 444455 466778877754322111 001 11112234445554432 5788999877763
No 208
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.97 E-value=2.3e-05 Score=78.98 Aligned_cols=120 Identities=11% Similarity=0.186 Sum_probs=65.7
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCC
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 272 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~ 272 (548)
+..+.|+|||+.|+....+ ..|.++|+.++.......+....+.+....|+|||++|+.... .
T Consensus 14 v~~~~~s~~g~~l~~~~~d---------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~--------d 76 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTAT---------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ--------D 76 (377)
T ss_dssp CSCCEECSSSSEEECCCSS---------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET--------T
T ss_pred EEEEEECCCCCEEEEecCC---------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC--------C
Confidence 5567899999987664332 2456667666620002233333445677899999998885552 2
Q ss_pred ceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCe
Q 008927 273 AELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNE 336 (548)
Q Consensus 273 ~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~ 336 (548)
..|.+.++...........+.+.. ..+....|+|||++++.... ++ .|..+++.+++
T Consensus 77 ~~v~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~ 133 (377)
T 3dwl_C 77 RNAYVYEKRPDGTWKQTLVLLRLN----RAATFVRWSPNEDKFAVGSG-AR--VISVCYFEQEN 133 (377)
T ss_dssp SSEEEC------CCCCEEECCCCS----SCEEEEECCTTSSCCEEEES-SS--CEEECCC----
T ss_pred CeEEEEEcCCCCceeeeeEecccC----CceEEEEECCCCCEEEEEec-CC--eEEEEEECCcc
Confidence 458888887432121223333333 46778899999994444333 33 46666766654
No 209
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=97.95 E-value=9.8e-06 Score=80.62 Aligned_cols=72 Identities=18% Similarity=0.192 Sum_probs=55.0
Q ss_pred CCeEEEeeccCCCe-EEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccChHHHHHHh-cCcEEEEeCCCCCC
Q 008927 460 LPELIEFPTEVPGQ-KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWTS-RGWAFVDVNYGGST 536 (548)
Q Consensus 460 ~pe~i~~~s~~dG~-~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~~~~Q~~as-rGyaVl~~NyRGSt 536 (548)
..+.+++++. ||. ++++++|.|.+. .++.|+||++|||+... ....|......|+. .||.|+.+||||..
T Consensus 50 ~~~~~~i~~~-~g~~~l~~~~~~P~~~------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~ 122 (323)
T 1lzl_A 50 SLRELSAPGL-DGDPEVKIRFVTPDNT------AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAP 122 (323)
T ss_dssp EEEEEEECCS-TTCCCEEEEEEEESSC------CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTT
T ss_pred eEEEEEecCC-CCCceeEEEEEecCCC------CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCC
Confidence 4577888887 887 899999999641 34679999999998532 22345556677887 59999999999976
Q ss_pred CC
Q 008927 537 GL 538 (548)
Q Consensus 537 Gy 538 (548)
..
T Consensus 123 ~~ 124 (323)
T 1lzl_A 123 ET 124 (323)
T ss_dssp TS
T ss_pred CC
Confidence 64
No 210
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.95 E-value=0.0013 Score=71.57 Aligned_cols=196 Identities=15% Similarity=0.105 Sum_probs=120.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
.|.+.++.|||++...++|++++++| +..+.+.... ...-..+++++.++.|++. +.. ...|.++++
T Consensus 43 ~~d~~~~~lywtD~~~~~I~r~~~~g--~~~~~v~~~g---~~~P~GlAvD~~~~~LY~t-D~~-------~~~I~v~~~ 109 (628)
T 4a0p_A 43 DFDVTDNRIYWTDISLKTISRAFMNG--SALEHVVEFG---LDYPEGMAVDWLGKNLYWA-DTG-------TNRIEVSKL 109 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTS--CSCEEEECSS---CSCCCEEEEETTTTEEEEE-ETT-------TTEEEEEET
T ss_pred EEECCCCEEEEEECCCCeEEEEECCC--CCcEEEEeCC---CCCcceEEEEeCCCEEEEE-ECC-------CCEEEEEec
Confidence 55556789999998889999999987 5555543321 1123456778888887664 321 258999999
Q ss_pred CCCCccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 229 NGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 229 ~~g~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+++. .+.|.. .-..-...++.|....|+|..|.. ...|+.+++++. . .+.+...- .....+.
T Consensus 110 dG~~---~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~------~~~I~r~~~dG~-~---~~~l~~~~----~~P~Gla 172 (628)
T 4a0p_A 110 DGQH---RQVLVWKDLDSPRALALDPAEGFMYWTEWGG------KPKIDRAAMDGS-E---RTTLVPNV----GRANGLT 172 (628)
T ss_dssp TSTT---CEEEECSSCCCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSC-S---CEEEECSC----SSEEEEE
T ss_pred CCCc---EEEEEeCCCCCcccEEEccCCCeEEEeCCCC------CCEEEEEeCCCC-c---eEEEECCC----CCcceEE
Confidence 9886 666653 222234557898777888776532 468999998742 2 23332221 3445678
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
.+++++.+|.+|. +...|++++++++..+.+.. ....| .+ .+. +++.||++- -....|+++|
T Consensus 173 lD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~---~l~~P---~g---lav-----~~~~ly~tD--~~~~~I~~~d 234 (628)
T 4a0p_A 173 IDYAKRRLYWTDL--DTNLIESSNMLGLNREVIAD---DLPHP---FG---LTQ-----YQDYIYWTD--WSRRSIERAN 234 (628)
T ss_dssp EETTTTEEEEEET--TTTEEEEEETTSCSCEEEEE---CCSCE---EE---EEE-----ETTEEEEEE--TTTTEEEEEE
T ss_pred EccccCEEEEEEC--CCCEEEEEcCCCCceEEeec---cCCCc---eE---EEE-----ECCEEEEec--CCCCEEEEEE
Confidence 8888774444554 23478999987655543321 11112 11 233 456777653 2344678888
Q ss_pred CCCCc
Q 008927 388 DFGHS 392 (548)
Q Consensus 388 l~~g~ 392 (548)
..+|+
T Consensus 235 k~tg~ 239 (628)
T 4a0p_A 235 KTSGQ 239 (628)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 76664
No 211
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=97.94 E-value=1.1e-05 Score=77.97 Aligned_cols=68 Identities=12% Similarity=0.106 Sum_probs=50.0
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 464 i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
.+|.+. +|..++.|+..|.. .. ++++.|+||++|||+.. .....+....+.|+++||.|+.+||||..
T Consensus 17 ~~~~~~-~g~~l~~~~~~~~~--~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g 85 (276)
T 3hxk_A 17 STFSLN-DTAWVDFYQLQNPR--QN--ENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMN 85 (276)
T ss_dssp EECCCB-TTBEEEEECCCC----------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTT
T ss_pred ccccCC-CCeEEEEEEeCCcc--cc--cCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCC
Confidence 456776 89999998877742 11 23677999999999844 33344556778999999999999999973
No 212
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.94 E-value=0.0005 Score=68.25 Aligned_cols=153 Identities=11% Similarity=0.086 Sum_probs=88.8
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCC-CCCceecceeeCCC----CCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYG-EPLVSYADGIFDPR----FNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~-~~~~~~~~~~~SpD----G~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
++.+++....++.|.+.++..+ ...+.+..... .....+....|+|+ |+.|+....+ ..|.++|+
T Consensus 33 ~~~~~~~~~~~~~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d---------g~i~v~d~ 102 (366)
T 3k26_A 33 GDPLVFATVGSNRVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR---------GIIRIINP 102 (366)
T ss_dssp TSCEEEEEEETTEEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT---------CEEEEECT
T ss_pred CCceEEEECCCCEEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC---------CEEEEEEc
Confidence 3444444444556776676641 23333332100 01124567789998 4455544322 47889999
Q ss_pred CCCCccCcEEeeecCCceeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE---cCCCCCcccCCc
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV---AGFDPTIVESPT 304 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l---~~~~~~~~~~~~ 304 (548)
.+++. ...+......+....|+| |++.|+-... ...|.+.++.. ++ ....+ .+.. ..+.
T Consensus 103 ~~~~~--~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--------dg~i~iwd~~~-~~--~~~~~~~~~~~~----~~v~ 165 (366)
T 3k26_A 103 ITMQC--IKHYVGHGNAINELKFHPRDPNLLLSVSK--------DHALRLWNIQT-DT--LVAIFGGVEGHR----DEVL 165 (366)
T ss_dssp TTCCE--EEEEESCCSCEEEEEECSSCTTEEEEEET--------TSCEEEEETTT-TE--EEEEECSTTSCS----SCEE
T ss_pred hhceE--eeeecCCCCcEEEEEECCCCCCEEEEEeC--------CCeEEEEEeec-Ce--EEEEeccccccc----Ccee
Confidence 98871 233433445577889999 8888774442 34688999874 43 23333 2322 4677
Q ss_pred CceECcCCcEEEEEeCCCCeeeEEEEeccCCe
Q 008927 305 EPKWSSKGELFFVTDRKNGFWNLHKWIESNNE 336 (548)
Q Consensus 305 ~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~ 336 (548)
...|+|||++++.... +| .|..+|+.+++
T Consensus 166 ~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~ 194 (366)
T 3k26_A 166 SADYDLLGEKIMSCGM-DH--SLKLWRINSKR 194 (366)
T ss_dssp EEEECTTSSEEEEEET-TS--CEEEEESCSHH
T ss_pred EEEECCCCCEEEEecC-CC--CEEEEECCCCc
Confidence 8999999995555444 44 46666766654
No 213
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=97.94 E-value=1.3e-05 Score=74.25 Aligned_cols=64 Identities=11% Similarity=0.054 Sum_probs=52.0
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.+.+++++ ||.+++++++.|.+ +.|+||++||+......+.+....+.|+++||.|+.+|+||.
T Consensus 12 ~~~~~~~~--~g~~l~~~~~~p~~---------~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 75 (223)
T 2o2g_A 12 EYAVSVSV--GEVKLKGNLVIPNG---------ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQ 75 (223)
T ss_dssp EEEEEEEE--TTEEEEEEEECCTT---------CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCH
T ss_pred eeEEEEec--CCeEEEEEEecCCC---------CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCc
Confidence 46788886 79999999999842 469999999998665544445667889999999999999973
No 214
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.92 E-value=0.0012 Score=67.81 Aligned_cols=155 Identities=14% Similarity=0.105 Sum_probs=82.6
Q ss_pred CeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEecc-------CCCCC----CceeEEEEEECCCCC
Q 008927 165 QRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDR-------RQDAL----NSTTEIVAIALNGQN 232 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~-------~~~~~----~~~~~l~~idl~~g~ 232 (548)
+.|.++|.++ .+.+ .+..........| ++.|+||++. +++++-. .-.+. +....|.++|+++++
T Consensus 164 g~v~vlD~~T--~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 164 GGILMLDHYS--FEPLGKWEIDRGDQYLAY-DFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp CEEEEECTTT--CCEEEECCSBCTTCCCCC-CEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred CeEEEEECCC--CeEEEEEccCCCCccccc-eEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 6899999887 4543 4432211111122 5789999995 4554411 00000 234689999999875
Q ss_pred ccCcEEeeecCC-c-eee--eEECCCCCEEEEEEec--CCCCCCCCceEEEEEecCCCceeeeEEE--cCCCC-C-c---
Q 008927 233 IQEPKVLVSGSD-F-YAF--PRMDPRGERMAWIEWH--HPNMPWDKAELWVGYISENGDVYKRVCV--AGFDP-T-I--- 299 (548)
Q Consensus 233 ~~~~~~L~~~~~-~-~~~--p~~SPDGk~La~~~~~--~~~~p~~~~~L~v~~~~~~g~~~~~~~l--~~~~~-~-~--- 299 (548)
. ...|.-+.. . -.. +.++|||+++ |+... ..+ ..++|+++..+. |++.....+ ..... . .
T Consensus 240 ~--~~tI~vg~~g~~P~~i~f~~~Pdg~~a-YV~~e~~~~~---Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~ 312 (462)
T 2ece_A 240 R--IHSLTLGEENRMALELRPLHDPTKLMG-FINMVVSLKD---LSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEI 312 (462)
T ss_dssp E--EEEEESCTTEEEEEEEEECSSTTCCEE-EEEEEEETTT---CCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGG
T ss_pred E--eeEEecCCCCCccceeEeeECCCCCEE-EEEEeeeccC---CCceEEEEEecC-CceeEEEEEeCCCcccccccccc
Confidence 2 233433311 1 111 2359999965 45422 111 145788877763 654333322 11000 0 0
Q ss_pred -------ccCCcCceECcCCcEEEEEeCCCCeeeEEEEec
Q 008927 300 -------VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (548)
Q Consensus 300 -------~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~ 332 (548)
.........|+||+.+|+++++.+ .|..+++
T Consensus 313 ~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d--~VavfdV 350 (462)
T 2ece_A 313 LKPFKAVPPLVTDIDISLDDKFLYLSLWGIG--EVRQYDI 350 (462)
T ss_dssp GGGGTEECCCCCCEEECTTSCEEEEEETTTT--EEEEEEC
T ss_pred ccccccCCCceeEEEECCCCCEEEEEeCCCC--EEEEEEe
Confidence 023466789999997788887555 4555554
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.92 E-value=0.0022 Score=64.86 Aligned_cols=97 Identities=2% Similarity=-0.212 Sum_probs=56.4
Q ss_pred CEEEEEeCCCC----eEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEec-cCCCCCCceeEEEEEEC
Q 008927 155 DTVIFSNYKDQ----RLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVRED-RRQDALNSTTEIVAIAL 228 (548)
Q Consensus 155 ~~i~F~~~~~~----~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~-~~~~~~~~~~~l~~idl 228 (548)
.++|-++..++ +|+++|.++ .+. ..+..+. . ..+.+||||++|+..... .+...++.-+.|.+||+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t--~~v~~~i~vG~-----~-P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~ 103 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGC--GVTLGHSLGAF-----L-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP 103 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEECT-----T-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT
T ss_pred CeEEEECCccCCccceEEEEECCC--CeEEEEEeCCC-----C-CceEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 45555555444 899999987 443 2333221 1 257899999986554221 01011123468999999
Q ss_pred CCCCccCcEEeeec--C-----CceeeeEECCCCCEEEEEE
Q 008927 229 NGQNIQEPKVLVSG--S-----DFYAFPRMDPRGERMAWIE 262 (548)
Q Consensus 229 ~~g~~~~~~~L~~~--~-----~~~~~p~~SPDGk~La~~~ 262 (548)
.+++. ...|.-+ . ..-....+||||++|+ +.
T Consensus 104 ~T~~v--v~~I~v~~~~~~~~g~~P~~ia~SpDGk~ly-Va 141 (368)
T 1mda_H 104 VTFLP--IADIELPDAPRFSVGPRVHIIGNCASSACLL-FF 141 (368)
T ss_dssp TTCCE--EEEEEETTSCSCCBSCCTTSEEECTTSSCEE-EE
T ss_pred CCCCE--EEEEECCCccccccCCCcceEEEcCCCCEEE-EE
Confidence 99872 2334322 1 1123457999999875 54
No 216
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.91 E-value=0.0011 Score=73.01 Aligned_cols=202 Identities=11% Similarity=0.046 Sum_probs=112.7
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+.++| |+.++--. .+|...||..... ...+.+......+. .-+|++++..|+- ...++.|
T Consensus 431 ~~v~~v~~s~~g~~l~sgs----~Dg~v~vwd~~~~--~~~~~~~~h~~~v~-------~~~~s~~~~~l~s-~s~D~~i 496 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGS----WDGELRLWDLAAG--VSTRRFVGHTKDVL-------SVAFSLDNRQIVS-ASRDRTI 496 (694)
T ss_dssp SCEEEEEECTTSSEEEEEE----TTSEEEEEETTTT--EEEEEEECCSSCEE-------EEEECTTSSCEEE-EETTSCE
T ss_pred CcEEEEEECCCCCEEEEEe----CCCcEEEEECCCC--cceeEEeCCCCCEE-------EEEEeCCCCEEEE-EeCCCEE
Confidence 4566788888 65554332 2577777766432 12233322211111 1246666665543 4456667
Q ss_pred EEEeCCCCCCCceecCCCCCCCCceecceeeCCCCC--EEEEEEeccCCCCCCceeEEEEEECCCCCccCcE-EeeecCC
Q 008927 168 YKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFN--RYVTVREDRRQDALNSTTEIVAIALNGQNIQEPK-VLVSGSD 244 (548)
Q Consensus 168 y~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~--~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~-~L~~~~~ 244 (548)
.+.+..+ .....+..........+....|+|++. .|+....+ ..|.++|+.+++ .. .+.....
T Consensus 497 ~iwd~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d---------~~v~vwd~~~~~---~~~~~~~h~~ 562 (694)
T 3dm0_A 497 KLWNTLG--ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD---------KTVKVWNLSNCK---LRSTLAGHTG 562 (694)
T ss_dssp EEECTTS--CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT---------SCEEEEETTTCC---EEEEECCCSS
T ss_pred EEEECCC--CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC---------CeEEEEECCCCc---EEEEEcCCCC
Confidence 7767654 323333221100112355678999873 44443222 358888998876 43 3333444
Q ss_pred ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCe
Q 008927 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 324 (548)
Q Consensus 245 ~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~ 324 (548)
.+....|||||+.|+-.+. ...|.+.|+.. ++ ....+.. . ..+....|+||+.++..... .
T Consensus 563 ~v~~v~~spdg~~l~sg~~--------Dg~i~iwd~~~-~~--~~~~~~~-~----~~v~~~~~sp~~~~l~~~~~-~-- 623 (694)
T 3dm0_A 563 YVSTVAVSPDGSLCASGGK--------DGVVLLWDLAE-GK--KLYSLEA-N----SVIHALCFSPNRYWLCAATE-H-- 623 (694)
T ss_dssp CEEEEEECTTSSEEEEEET--------TSBCEEEETTT-TE--EEECCBC-S----SCEEEEEECSSSSEEEEEET-T--
T ss_pred CEEEEEEeCCCCEEEEEeC--------CCeEEEEECCC-Cc--eEEEecC-C----CcEEEEEEcCCCcEEEEEcC-C--
Confidence 5777899999998874442 34678889874 43 1222222 1 34667899999985555433 2
Q ss_pred eeEEEEeccCCeeE
Q 008927 325 WNLHKWIESNNEVL 338 (548)
Q Consensus 325 ~~Ly~~d~~~g~~~ 338 (548)
.|.++|+.+++..
T Consensus 624 -~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 624 -GIKIWDLESKSIV 636 (694)
T ss_dssp -EEEEEETTTTEEE
T ss_pred -CEEEEECCCCCCh
Confidence 3778888877653
No 217
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.91 E-value=0.0019 Score=65.36 Aligned_cols=206 Identities=10% Similarity=0.053 Sum_probs=111.3
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCC
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~ 271 (548)
.+....|+|||+.|+....+ ..|.++|+.+++. ...+......+....|+|||+.|+-...
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D---------~~v~iWd~~~~~~--~~~~~~h~~~v~~~~~s~~g~~las~~~-------- 128 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQD---------GRLIVWNALTSQK--THAIKLHCPWVMECAFAPNGQSVACGGL-------- 128 (380)
T ss_dssp CEEEEEECTTSSCEEEEETT---------SEEEEEETTTTEE--EEEEECCCTTCCCCEECTTSSEEEECCS--------
T ss_pred EEEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCcc--ceEEecCCCCEEEEEECCCCCEEEEeeC--------
Confidence 45667899999987765433 3688889988761 2334434445667789999999874332
Q ss_pred CceEEEEEecCC----CceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccc
Q 008927 272 KAELWVGYISEN----GDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAE 346 (548)
Q Consensus 272 ~~~L~v~~~~~~----g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d 346 (548)
...+.+.++... +.....+.+.+.. ..+....|+|++. .++.... ++ .|..+|+.+++..........
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~----~~v~~~~~~~~~~~~l~s~s~-D~--~i~~wd~~~~~~~~~~~~~~~ 201 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHK----GYASSCQYVPDQETRLITGSG-DQ--TCVLWDVTTGQRISIFGSEFP 201 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCS----SCCCCCBCCSSSSSCEEEECT-TS--CEEEECTTTCCEEEEECCCSS
T ss_pred CCcEEEEECCCCccccCCccceeeccCCC----cceEEEEEecCCCCEEEEECC-CC--cEEEEEcCCCcEEEEeecccC
Confidence 234556666531 1111122334433 4567788999866 5555443 33 466778877765443311100
Q ss_pred cCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCC--ceEeecCCCceeEee--eecCCEEEEEEecCCC
Q 008927 347 FSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGH--SLSLLDIPFTDIDNI--TLGNDCLFVEGASGVE 422 (548)
Q Consensus 347 ~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g--~~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~ 422 (548)
.+.... .....+.+ .+..++++...++.- .+.|+... .++.+......+..+ ++++..++ .++.
T Consensus 202 ~~h~~~---v~~~~~~~---~~~~~l~sgs~D~~v--~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-s~s~--- 269 (380)
T 3iz6_a 202 SGHTAD---VLSLSINS---LNANMFISGSCDTTV--RLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG-TGSD--- 269 (380)
T ss_dssp SSCCSC---EEEEEECS---SSCCEEEEEETTSCE--EEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE-EECS---
T ss_pred CCCccC---eEEEEeec---CCCCEEEEEECCCeE--EEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE-EEcC---
Confidence 011111 11223321 234455566666654 45576532 233443333334444 56776543 3332
Q ss_pred CCeEEEEEcCCCc
Q 008927 423 PSSVAKVTLDDHK 435 (548)
Q Consensus 423 p~~l~~~d~~~~~ 435 (548)
-..|.++|+.+++
T Consensus 270 D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 270 DGTCRLFDMRTGH 282 (380)
T ss_dssp SSCEEEEETTTTE
T ss_pred CCeEEEEECCCCc
Confidence 2568888988775
No 218
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.90 E-value=0.008 Score=58.31 Aligned_cols=201 Identities=10% Similarity=0.106 Sum_probs=106.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCC-ceecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~-~~~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|+++|+.|+-. ..++.|.+.++.++..+ ...+... ...+....|+|+ |+.|+....+ ..|.+
T Consensus 16 ~~s~~g~~las~-s~D~~v~iw~~~~~~~~~~~~l~gH----~~~V~~v~~s~~~~g~~l~s~s~D---------~~v~i 81 (297)
T 2pm7_B 16 VMDYYGKRMATC-SSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVMI 81 (297)
T ss_dssp EECTTSSEEEEE-ETTSCEEEEEBCSSCBCCCEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------TEEEE
T ss_pred EECCCCCEEEEE-eCCCEEEEEecCCCCcEEEEEEccc----cCCeEEEEecCCCcCCEEEEEcCC---------CEEEE
Confidence 455666665544 35666666666541012 2344433 223556778874 7776655433 35778
Q ss_pred EECCCCCccCcEEeeecCCceeeeEECCC--CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~SPD--Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~ 303 (548)
+|+.+++......+......+....|+|| |+.|+-... ...|.+.++...+.. ....+.+.. ..+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~--------d~~v~~wd~~~~~~~-~~~~~~~h~----~~v 148 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS--------DGKVSVVEFKENGTT-SPIIIDAHA----IGV 148 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--------TSEEEEEEBCSSSCB-CCEEEECCS----SCE
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC--------CCcEEEEEecCCCce-eeeeeeccc----Ccc
Confidence 88887741112333333445677899998 887774442 356888888743221 123343333 456
Q ss_pred cCceECcC-------------CcEEEEEeCCCCeeeEEEEeccCCe--eEeecccccccCCCcccccCcceeeeeecCCC
Q 008927 304 TEPKWSSK-------------GELFFVTDRKNGFWNLHKWIESNNE--VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEK 368 (548)
Q Consensus 304 ~~~~wspD-------------G~L~~~sd~~~g~~~Ly~~d~~~g~--~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~ 368 (548)
....|+|+ +++++.... ++.-.||-+ .+++ ...+.... +...++ ....|.| ++
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-D~~v~lwd~--~~~~~~~~~~~~l~---~H~~~V---~~v~~sp---~~ 216 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKY--NSDAQTYVLESTLE---GHSDWV---RDVAWSP---TV 216 (297)
T ss_dssp EEEEECCCC------------CCEEEEEET-TSCEEEEEE--ETTTTEEEEEEEEC---CCSSCE---EEEEECC---CC
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcC-CCcEEEEEE--cCCCceEEEEEEec---CCCCce---EEEEECC---CC
Confidence 77889997 345555444 555555544 3433 11111000 111222 2245654 43
Q ss_pred --CEEEEEEEeCCeEEEEEEEC
Q 008927 369 --NLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 369 --~~l~~~~~~~g~~~L~~~dl 388 (548)
+.++++...++.-.|+-++.
T Consensus 217 ~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 217 LLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp SSSEEEEEEETTSCEEEEEESS
T ss_pred CCceEEEEEECCCcEEEEEeCC
Confidence 45666777777777765543
No 219
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=97.90 E-value=7.8e-06 Score=79.41 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=55.0
Q ss_pred ccCCeEEEeeccCCCeEEEEEEEcCCCC-CCCCCCCCCCcEEEEEccCcc-ccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 458 FSLPELIEFPTEVPGQKAYAYYYPPSNP-IYQASPEEKPPLLVKSHGGPT-SEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 458 ~~~pe~i~~~s~~dG~~i~g~l~~P~~~-~~~~~~~~~~Pliv~iHGGP~-~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
....+.|.|.+. +|..+...+| |.++ ++. .+++.|+||++|||+. ......|....+.|+++||.|+.+||||+
T Consensus 16 ~~~~~~v~~~~~-~g~~~~~~~y-p~~~~~~~--~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 91 (283)
T 3bjr_A 16 YFQGMQVIKQKL-TATCAQLTGY-LHQPDTNA--HQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLL 91 (283)
T ss_dssp -CCSSEEEEEEC-TTSSCEEEEE-EC----------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCT
T ss_pred CCCCcceEEeec-CCCceeEEEe-cCCccccc--cCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCC
Confidence 345678899987 8888888888 6431 111 2457799999999984 33334466677899999999999999997
Q ss_pred CCC
Q 008927 536 TGL 538 (548)
Q Consensus 536 tGy 538 (548)
...
T Consensus 92 ~~~ 94 (283)
T 3bjr_A 92 TDQ 94 (283)
T ss_dssp TTC
T ss_pred Ccc
Confidence 764
No 220
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=97.90 E-value=1.4e-05 Score=82.12 Aligned_cols=73 Identities=21% Similarity=0.182 Sum_probs=54.8
Q ss_pred CeEEEeecc-CCC--eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc---------CccChHHHHHHhcCcEEE
Q 008927 461 PELIEFPTE-VPG--QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR---------GILNLSIQYWTSRGWAFV 528 (548)
Q Consensus 461 pe~i~~~s~-~dG--~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~---------~~~~~~~Q~~asrGyaVl 528 (548)
...|.|.+. .+| ..+.|+++.|.+. . +.+++|+||++||++..... ..+...++.|+++||+|+
T Consensus 46 ~~~i~y~t~~~~g~~~~~~g~l~~P~~~--~--~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~ 121 (397)
T 3h2g_A 46 VAEFTYATIGVEGEPATASGVLLIPGGE--R--CSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVV 121 (397)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEECT--T--CCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEE
T ss_pred EEEEEEEecCCCCCeEEEEEEEEeCCCC--C--CCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEE
Confidence 355777765 124 4699999999753 2 24578999999999875432 236677899999999999
Q ss_pred EeCCCCCCC
Q 008927 529 DVNYGGSTG 537 (548)
Q Consensus 529 ~~NyRGStG 537 (548)
.+||||..+
T Consensus 122 ~~D~~G~G~ 130 (397)
T 3h2g_A 122 GSDYLGLGK 130 (397)
T ss_dssp EECCTTSTT
T ss_pred EecCCCCCC
Confidence 999999754
No 221
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.90 E-value=0.013 Score=60.34 Aligned_cols=186 Identities=11% Similarity=0.050 Sum_probs=103.5
Q ss_pred eeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEE
Q 008927 197 IFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELW 276 (548)
Q Consensus 197 ~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~ 276 (548)
.++++++.|+....+ ..|.++|+.+++. ...+...........|+|||+.|+-.. . ...|.
T Consensus 275 ~~~~~~~~l~~~~~d---------~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~sg~-~-------dg~i~ 335 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYD---------NTLIVWDVAQMKC--LYILSGHTDRIYSTIYDHERKRCISAS-M-------DTTIR 335 (464)
T ss_dssp EEEEETTEEEEEETT---------SCEEEEETTTTEE--EEEECCCSSCEEEEEEETTTTEEEEEE-T-------TSCEE
T ss_pred EEcCCCCEEEEEeCC---------CeEEEEECCCCcE--EEEecCCCCCEEEEEEcCCCCEEEEEe-C-------CCcEE
Confidence 357788877665433 3588889988761 223333344566778999999887443 1 34688
Q ss_pred EEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccC
Q 008927 277 VGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGI 356 (548)
Q Consensus 277 v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~ 356 (548)
+.++.. ++ ....+.+.. ..+....|+ +++++.... +| .|..+|+.+++........ .. .
T Consensus 336 vwd~~~-~~--~~~~~~~h~----~~v~~~~~~--~~~l~s~s~-dg--~v~vwd~~~~~~~~~~~~~----~~-----~ 394 (464)
T 3v7d_B 336 IWDLEN-GE--LMYTLQGHT----ALVGLLRLS--DKFLVSAAA-DG--SIRGWDANDYSRKFSYHHT----NL-----S 394 (464)
T ss_dssp EEETTT-TE--EEEEECCCS----SCEEEEEEC--SSEEEEEET-TS--EEEEEETTTCCEEEEEECT----TC-----C
T ss_pred EEECCC-Cc--EEEEEeCCC----CcEEEEEEc--CCEEEEEeC-CC--cEEEEECCCCceeeeecCC----CC-----c
Confidence 999874 54 233444433 456667776 454444443 44 4666777665533222111 11 1
Q ss_pred cceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEee-c-CCCceeEeeeecCCEEEEEEecCCCCCeEEEEE
Q 008927 357 NSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLL-D-IPFTDIDNITLGNDCLFVEGASGVEPSSVAKVT 430 (548)
Q Consensus 357 ~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l-~-~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d 430 (548)
....+.+ +++.|+ +.. ++ .+.++|+++|+.... . .....+..+..+++.+++..+. ....-++.+|
T Consensus 395 ~~~~~~~---~~~~l~-~~~-dg--~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~-~g~~~i~~ld 462 (464)
T 3v7d_B 395 AITTFYV---SDNILV-SGS-EN--QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEK-DGQSFLEILD 462 (464)
T ss_dssp CEEEEEE---CSSEEE-EEE-TT--EEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEE-TTEEEEEEEE
T ss_pred cEEEEEe---CCCEEE-Eec-CC--eEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEe-CCeEEEEEee
Confidence 1123443 555544 433 44 577789988876532 2 2233455565667777666554 2233344444
No 222
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.90 E-value=0.0021 Score=62.71 Aligned_cols=203 Identities=10% Similarity=-0.005 Sum_probs=105.2
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEE--CCEEEEEeCCCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNYKDQ 165 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~--~~~i~F~~~~~~ 165 (548)
..+..+.++| |+.++-.. .+|...||..... ....++...-......+. .-.|++. +..|+ +...++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~--~~~~~~~~~~~~~~~~v~---~~~~~~~~d~~~l~-s~~~dg 81 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCS----SDQHIKVFKLDKD--TSNWELSDSWRAHDSSIV---AIDWASPEYGRIIA-SASYDK 81 (351)
T ss_dssp SCEEEEEECSSSSEEEEEE----TTSEEEEEEECSS--SCCEEEEEEEECCSSCEE---EEEECCGGGCSEEE-EEETTS
T ss_pred cceeEEEEcCCCCEEEEee----CCCeEEEEECCCC--CCcceecceeccCCCcEE---EEEEcCCCCCCEEE-EEcCCC
Confidence 4577889999 66554432 2577788877543 122122110000011111 1245553 44444 444567
Q ss_pred eEEEEeCCCCCC-------C-ceecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 166 RLYKHSIDSKDS-------S-PLPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 166 ~Ly~~~~~~~~~-------~-~~~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.|.+.++..+.. + ...+... ...+..+.|+|+ ++.|+....+ ..|.++|+.+++.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~-- 146 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDS----KGSLYSVKFAPAHLGLKLACLGND---------GILRLYDALEPSD-- 146 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------CEEEEEECSSTTC--
T ss_pred eEEEEecCCCcccccccCcceeeeeccc----CCceeEEEEcCCCCCcEEEEecCC---------CcEEEecCCChHH--
Confidence 676667654101 0 1122222 234667889999 8887775433 3688889887752
Q ss_pred cEEee-------------ecCCceeeeEECCC---CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCc
Q 008927 236 PKVLV-------------SGSDFYAFPRMDPR---GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (548)
Q Consensus 236 ~~~L~-------------~~~~~~~~p~~SPD---Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~ 299 (548)
...+. ..........|+|+ ++.|+... . ...+.+.+.. .+.......+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~-~-------~~~~~~~~~~-~~~~~~~~~~~~h~--- 214 (351)
T 3f3f_A 147 LRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA-L-------EQAIIYQRGK-DGKLHVAAKLPGHK--- 214 (351)
T ss_dssp TTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE-T-------TEEEEEEECT-TSCEEEEEECCCCC---
T ss_pred hccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec-C-------CCcEEEEccC-CCceeeeeecCCCC---
Confidence 11111 11122456789997 88777544 1 2234333333 34432223333332
Q ss_pred ccCCcCceECcCC----cEEEEEeCCCCeeeEEEE
Q 008927 300 VESPTEPKWSSKG----ELFFVTDRKNGFWNLHKW 330 (548)
Q Consensus 300 ~~~~~~~~wspDG----~L~~~sd~~~g~~~Ly~~ 330 (548)
..+....|+|+| ++++.... +|.-.||-+
T Consensus 215 -~~i~~~~~~p~~~~~~~~l~s~~~-dg~i~iwd~ 247 (351)
T 3f3f_A 215 -SLIRSISWAPSIGRWYQLIATGCK-DGRIRIFKI 247 (351)
T ss_dssp -SCEEEEEECCCSSCSSEEEEEEET-TSCEEEEEE
T ss_pred -cceeEEEECCCCCCcceEEEEEcC-CCeEEEEeC
Confidence 457788999998 66556554 555444444
No 223
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.0045 Score=61.21 Aligned_cols=199 Identities=9% Similarity=0.072 Sum_probs=100.3
Q ss_pred EEECCEEEEEeCCCCeEEEEeCCCCCCCce---ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 151 RIFGDTVIFSNYKDQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 151 ~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~---~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.++++ ++.+...++.|.+.++.. +..+ .+.... ....+....|+|||+.|+....+. .|.++|
T Consensus 21 ~~s~~-~las~~~D~~i~lw~~~~--~~~~~~~~~~~~~--h~~~v~~v~~sp~~~~las~s~D~---------~v~iw~ 86 (330)
T 2hes_X 21 DFSQG-ILATGSTDRKIKLVSVKY--DDFTLIDVLDETA--HKKAIRSVAWRPHTSLLAAGSFDS---------TVSIWA 86 (330)
T ss_dssp EEETT-EEEEEESSSCEEEEECSS--SCCEEEEEECTTC--CCSCEEEEEECTTSSEEEEEETTS---------CEEEEE
T ss_pred ccCCC-EEEEEcCCCEEEEEEecC--CCeEEEEEEecCC--ccCCEEEEEECCCCCEEEEEeCCC---------cEEEEE
Confidence 34455 444545567777777764 3222 231110 122456778999999877654432 355566
Q ss_pred CCCCCc--cCc---EEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCc-eeeeEEEcCCCCCccc
Q 008927 228 LNGQNI--QEP---KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVE 301 (548)
Q Consensus 228 l~~g~~--~~~---~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~-~~~~~~l~~~~~~~~~ 301 (548)
+..+.. ... ..+....+.+....|||||++|+-.+. ...|.+.++...+. ......+.+.. .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~--------D~~v~iwd~~~~~~~~~~~~~~~~h~----~ 154 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR--------DKSVWIWETDESGEEYECISVLQEHS----Q 154 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET--------TSCEEEEECCTTCCCCEEEEEECCCS----S
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC--------CCEEEEEeccCCCCCeEEEEEeccCC----C
Confidence 643210 001 223333344667899999999885442 24578888843332 11123344433 4
Q ss_pred CCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCC-CEEEEEEEeCCe
Q 008927 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEK-NLIACSYRQNGR 380 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~-~~l~~~~~~~g~ 380 (548)
.+....|+|||++++.... ++.-.|| +..++..+.+.... ....+.| ...|.| ++ ..++++...++.
T Consensus 155 ~v~~v~~~p~~~~l~s~s~-D~~i~iW--~~~~~~~~~~~~~~-~h~~~v~-----~~~~~~---~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSY-DDTVRIW--KDYDDDWECVAVLN-GHEGTVW-----SSDFDK---TEGVFRLCSGSDDST 222 (330)
T ss_dssp CEEEEEECSSSSEEEEEET-TSCEEEE--EEETTEEEEEEEEC-CCSSCEE-----EEEECC---SSSSCEEEEEETTSC
T ss_pred ceEEEEECCCCCEEEEEcC-CCeEEEE--ECCCCCeeEEEEcc-CCCCcEE-----EEEecC---CCCeeEEEEEeCCCe
Confidence 5778899999996666544 5554555 44344322221100 0111122 133443 32 334556666777
Q ss_pred EEEEEEE
Q 008927 381 SYLGILD 387 (548)
Q Consensus 381 ~~L~~~d 387 (548)
-+||-+.
T Consensus 223 v~iw~~~ 229 (330)
T 2hes_X 223 VRVWKYM 229 (330)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 6676554
No 224
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=97.89 E-value=5.2e-06 Score=77.82 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=51.8
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
|.+++++. ||.+++++++.|.+ ++.|+||++||++.... .|....+.|+++||.|+.+|+||...
T Consensus 4 ~~~~~~~~-~g~~l~~~~~~p~~--------~~~p~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g~g~ 68 (236)
T 1zi8_A 4 EGISIQSY-DGHTFGALVGSPAK--------APAPVIVIAQDIFGVNA--FMRETVSWLVDQGYAAVCPDLYARQA 68 (236)
T ss_dssp TTCCEECT-TSCEECEEEECCSS--------CSEEEEEEECCTTBSCH--HHHHHHHHHHHTTCEEEEECGGGGTS
T ss_pred ceEEEecC-CCCeEEEEEECCCC--------CCCCEEEEEcCCCCCCH--HHHHHHHHHHhCCcEEEeccccccCC
Confidence 34667887 99999999999942 45799999999875543 45566788999999999999987644
No 225
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=97.89 E-value=2.2e-05 Score=74.73 Aligned_cols=67 Identities=16% Similarity=0.294 Sum_probs=50.0
Q ss_pred CCe--EEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc---CccChHHHHHHhcCcEEEEeCCCC
Q 008927 460 LPE--LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR---GILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 460 ~pe--~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~---~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
..| .+++++. || +++++++.|.+ ++.|+||++||.+..... ..|....+.|+++||.|+.+|+||
T Consensus 20 ~~e~~~~~~~~~-~g-~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 89 (249)
T 2i3d_A 20 QGHMPEVIFNGP-AG-RLEGRYQPSKE--------KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRS 89 (249)
T ss_dssp ----CEEEEEET-TE-EEEEEEECCSS--------TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCceeEEEEECC-Cc-eEEEEEEcCCC--------CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCC
Confidence 456 8999997 88 89999999842 456999999997643211 123456788999999999999998
Q ss_pred CC
Q 008927 535 ST 536 (548)
Q Consensus 535 St 536 (548)
..
T Consensus 90 ~G 91 (249)
T 2i3d_A 90 IG 91 (249)
T ss_dssp ST
T ss_pred CC
Confidence 53
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.86 E-value=0.0025 Score=65.71 Aligned_cols=128 Identities=8% Similarity=-0.134 Sum_probs=72.8
Q ss_pred CCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCC-CC--CCCceE
Q 008927 199 DPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPN-MP--WDKAEL 275 (548)
Q Consensus 199 SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~-~p--~~~~~L 275 (548)
.||++++ ||....... ..+.|.+||+++++. ...+.-+.. - ...+||||++|+ +...... .. -....|
T Consensus 81 ~~~~~~v-yV~n~~~~~---~~~~VsVID~~t~~v--v~~I~vG~~-P-gia~SpDgk~ly-Van~~~~~~~~G~~~~~V 151 (426)
T 3c75_H 81 APDARRV-YIQDPAHFA---AITQQFVIDGSTGRI--LGMTDGGFL-P-HPVAAEDGSFFA-QASTVFERIARGKRTDYV 151 (426)
T ss_dssp CCCTTEE-EEEECTTTC---SSEEEEEEETTTTEE--EEEEEECSS-C-EEEECTTSSCEE-EEEEEEEETTEEEEEEEE
T ss_pred CCCCCEE-EEECCCcCC---CCCeEEEEECCCCEE--EEEEECCCC-C-ceEECCCCCEEE-EEeccccccccCCCCCEE
Confidence 4688875 554332100 116899999999872 334444433 3 678999999876 4421100 00 013468
Q ss_pred EEEEecCCCceeeeEEEcCCCCCc--ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeE
Q 008927 276 WVGYISENGDVYKRVCVAGFDPTI--VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 276 ~v~~~~~~g~~~~~~~l~~~~~~~--~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
.++|... +++.....+.+.. .. ......+.++|||+.+|+++. .....|..+|++++++.
T Consensus 152 sviD~~t-~~vv~~I~v~g~~-r~~~g~~P~~~~~spDGk~lyV~n~-~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 152 EVFDPVT-FLPIADIELPDAP-RFLVGTYQWMNALTPDNKNLLFYQF-SPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp EEECTTT-CCEEEEEEETTCC-CCCBSCCGGGSEECTTSSEEEEEEC-SSSCEEEEEETTTTEEE
T ss_pred EEEECCC-CcEEEEEECCCcc-ccccCCCcceEEEcCCCCEEEEEec-CCCCeEEEEECCCCeEE
Confidence 9999874 4432222233111 00 023457899999996666554 22346888999888754
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.85 E-value=0.0015 Score=69.55 Aligned_cols=167 Identities=10% Similarity=-0.014 Sum_probs=91.1
Q ss_pred ECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceee-C-CCCCEEEEEEeccC---------CCCCCcee
Q 008927 153 FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF-D-PRFNRYVTVREDRR---------QDALNSTT 221 (548)
Q Consensus 153 ~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~-S-pDG~~i~~v~~~~~---------~~~~~~~~ 221 (548)
||++|+..+..+.+|-++|++. .+..++...+. ......+.+ + ||+++|++..+... +.+++..+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t--~~~~~ii~ip~--g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDV--MKCDAILEIPN--AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTT--TEEEEEEECSS--CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCC--ceEeeEEeCCC--CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 5555655555567999999987 55444333210 112334454 5 99999755432210 12345677
Q ss_pred EEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCC-C-------CC---------------------
Q 008927 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMP-W-------DK--------------------- 272 (548)
Q Consensus 222 ~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p-~-------~~--------------------- 272 (548)
.+-+||.++.+. ..++.-+. .......||||++++..+.+. ++- + ..
T Consensus 176 ~vtvID~~t~~v--~~qI~Vgg-~pd~~~~spdGk~~~vt~~~s-e~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 176 VFTAVDADKWEV--AWQVLVSG-NLDNCDADYEGKWAFSTSYNS-EKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEETTTTEE--EEEEEESS-CCCCEEECSSSSEEEEEESCT-TCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred eEEEEECCCCeE--EEEEEeCC-CccceEECCCCCEEEEEecCc-ccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 899999998762 22333222 234557899999876555332 210 0 00
Q ss_pred --ceEEEEEecCC-CceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCC
Q 008927 273 --AELWVGYISEN-GDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN 335 (548)
Q Consensus 273 --~~L~v~~~~~~-g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g 335 (548)
..+-++|.... ++. -...+.-. .+.....++|||+.+|+++..+ ..+..+|.++.
T Consensus 252 ~i~~V~VID~~~~~~~~-~~~~Ipvg-----~~PhGv~~sPDGk~v~V~~~~s--~~VsVid~~~~ 309 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSL-FTRYIPIA-----NNPHGCNMAPDKKHLCVAGKLS--PTVTVLDVTRF 309 (595)
T ss_dssp EETTEEEEECSGGGCCS-SEEEEEEE-----SSCCCEEECTTSSEEEEECTTS--SBEEEEEGGGH
T ss_pred EECcEEEEeCcccCCce-eEEEEecC-----CCceEEEEcCCCCEEEEeCCCC--CeEEEEECccc
Confidence 12445554420 110 01122111 2346678999999888887633 46777777643
No 228
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=97.85 E-value=7.9e-06 Score=81.47 Aligned_cols=71 Identities=10% Similarity=-0.011 Sum_probs=48.3
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccc-cCccChHHHHHHh-cCcEEEEeCCCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGILNLSIQYWTS-RGWAFVDVNYGGSTGL 538 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~-~~~~~~~~Q~~as-rGyaVl~~NyRGStGy 538 (548)
++.++++.. ++..|++++|.|.+ .++.|+||++|||..... ...+......|+. .||+|+.+|||++.++
T Consensus 54 ~~~~~~~~~-~~~~i~~~~~~p~~-------~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~ 125 (322)
T 3fak_A 54 ADDIQVEQV-TVAGCAAEWVRAPG-------CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEH 125 (322)
T ss_dssp CTTCEEEEE-EETTEEEEEEECTT-------CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CCCeeEEEE-eeCCeEEEEEeCCC-------CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCC
Confidence 333444433 33348999999954 346799999999975432 2234444556665 6999999999999875
Q ss_pred C
Q 008927 539 S 539 (548)
Q Consensus 539 G 539 (548)
.
T Consensus 126 ~ 126 (322)
T 3fak_A 126 P 126 (322)
T ss_dssp C
T ss_pred C
Confidence 4
No 229
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.00041 Score=73.67 Aligned_cols=190 Identities=9% Similarity=-0.006 Sum_probs=105.9
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCC-CCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGE-PLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~-~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|+|+|..|+-.+ .++.+.+.+.+ +....+. .... ....+..++|||||+.|+...++ ..|-++|
T Consensus 92 awSPdG~~LAs~s-~dg~V~iwd~~---~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D---------GtVkIWd 157 (588)
T 2j04_A 92 KPSPIDDWMAVLS-NNGNVSVFKDN---KMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED---------GELQFFS 157 (588)
T ss_dssp EECSSSSCEEEEE-TTSCEEEEETT---EEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT---------SEEEEEE
T ss_pred EECCCCCEEEEEe-CCCcEEEEeCC---ceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC---------CEEEEEE
Confidence 7889998887654 45556655643 2222333 2100 01236678999999998776443 3677788
Q ss_pred CCCCCccCc-----EEeee----cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCcee-eeEEEc-CCC
Q 008927 228 LNGQNIQEP-----KVLVS----GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY-KRVCVA-GFD 296 (548)
Q Consensus 228 l~~g~~~~~-----~~L~~----~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~-~~~~l~-~~~ 296 (548)
+.++...++ ..+.. ..+.+...+||||| |+-.+. ...+++.++++ +... ..+.+. +..
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~--------D~tVrlWd~~~-~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS--------NNSVFSMTVSA-SSHQPVSRMIQNASR 226 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET--------TCCEEEECCCS-SSSCCCEEEEECCCS
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC--------CCeEEEEECCC-Cccccceeeeccccc
Confidence 888751111 23321 12356778999999 543331 24578888874 3311 122342 322
Q ss_pred CCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceee--eeecCCCCEEEE
Q 008927 297 PTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEI--IQSHGEKNLIAC 373 (548)
Q Consensus 297 ~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~--~~~~~d~~~l~~ 373 (548)
..+....|+ |+ |+-.++ ..|.++++.+++...+... .... .....+ . .++..+.
T Consensus 227 ----~~V~svaFs--g~~LASa~~-----~tIkLWd~~~~~~~~~~~g-----h~~~---V~~va~~~s----~d~~~La 283 (588)
T 2j04_A 227 ----RKITDLKIV--DYKVVLTCP-----GYVHKIDLKNYSISSLKTG-----SLEN---FHIIPLNHE----KESTILL 283 (588)
T ss_dssp ----SCCCCEEEE--TTEEEEECS-----SEEEEEETTTTEEEEEECS-----CCSC---CCEEEETTC----SSCEEEE
T ss_pred ----CcEEEEEEE--CCEEEEEeC-----CeEEEEECCCCeEEEEEcC-----CCce---EEEEEeeeC----CCCCEEE
Confidence 468889999 46 443332 2788888888776443311 1111 112344 4 3345555
Q ss_pred EEEeCCeEEEEEEE
Q 008927 374 SYRQNGRSYLGILD 387 (548)
Q Consensus 374 ~~~~~g~~~L~~~d 387 (548)
++.++|. +|+.+|
T Consensus 284 ~a~edG~-klw~~d 296 (588)
T 2j04_A 284 MSNKTSY-KVLLED 296 (588)
T ss_dssp ECSSCEE-EEEESS
T ss_pred EEcCCCC-EEEeec
Confidence 6666777 777653
No 230
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.84 E-value=0.0025 Score=62.03 Aligned_cols=237 Identities=10% Similarity=0.043 Sum_probs=119.9
Q ss_pred CEEEEE-------eCCCCeEEEEeCCCCCCCceecCCCC-CCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 155 DTVIFS-------NYKDQRLYKHSIDSKDSSPLPITPDY-GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 155 ~~i~F~-------~~~~~~Ly~~~~~~~~~~~~~lT~~~-~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
+.|++. ...++.|+++++.+ ++.+.+.... .........+.+++|+..|++. ... ..|+++
T Consensus 29 g~l~~~~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~--------~~l~~~ 97 (314)
T 1pjx_A 29 GDFYIVAPEVEVNGKPAGEILRIDLKT--GKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMR--------LGLLVV 97 (314)
T ss_dssp SCEEEEETTCEETTEECCEEEEECTTT--CCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETT--------TEEEEE
T ss_pred CCEEEEEeccccCCCCCCEEEEEeCCC--CcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECC--------CCEEEE
Confidence 367777 34467899999876 5665554300 0001124456789993344443 221 269999
Q ss_pred ECCCCCccCcEEe-eecC-----CceeeeEECCCCCEEEEEEecCC--------CCCCCCceEEEEEecCCCceeeeEEE
Q 008927 227 ALNGQNIQEPKVL-VSGS-----DFYAFPRMDPRGERMAWIEWHHP--------NMPWDKAELWVGYISENGDVYKRVCV 292 (548)
Q Consensus 227 dl~~g~~~~~~~L-~~~~-----~~~~~p~~SPDGk~La~~~~~~~--------~~p~~~~~L~v~~~~~~g~~~~~~~l 292 (548)
|.+ ++ .+.+ .... .......++|||+ |.+...... ........|+.++.+ +++. ...
T Consensus 98 d~~-g~---~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~--~~~ 168 (314)
T 1pjx_A 98 QTD-GT---FEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQMI--QVD 168 (314)
T ss_dssp ETT-SC---EEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCEE--EEE
T ss_pred eCC-CC---EEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC--CCEE--Eec
Confidence 998 76 5555 3211 1234567899997 433332110 000012468877754 4421 112
Q ss_pred cCCCCCcccCCcCceEC----cCCcEEEEEeCCCCeeeEEEEecc-CCeeEe---eccccccc-CCCcccccCcceeeee
Q 008927 293 AGFDPTIVESPTEPKWS----SKGELFFVTDRKNGFWNLHKWIES-NNEVLA---IYSLDAEF-SRPLWVFGINSYEIIQ 363 (548)
Q Consensus 293 ~~~~~~~~~~~~~~~ws----pDG~L~~~sd~~~g~~~Ly~~d~~-~g~~~~---l~~~~~d~-~~p~w~~~~~~~~~~~ 363 (548)
.. . .......|+ |||+.+|+++... ..|++++++ +++... +....... ..| ....+.
T Consensus 169 ~~-~----~~~~~i~~~~~~d~dg~~l~v~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p------~~i~~d- 234 (314)
T 1pjx_A 169 TA-F----QFPNGIAVRHMNDGRPYQLIVAETPT--KKLWSYDIKGPAKIENKKVWGHIPGTHEGGA------DGMDFD- 234 (314)
T ss_dssp EE-E----SSEEEEEEEECTTSCEEEEEEEETTT--TEEEEEEEEETTEEEEEEEEEECCCCSSCEE------EEEEEB-
T ss_pred cC-C----CCcceEEEecccCCCCCEEEEEECCC--CeEEEEECCCCCccccceEEEECCCCCCCCC------CceEEC-
Confidence 11 1 223457899 9998444554313 357777765 454321 11100000 111 113343
Q ss_pred ecCCCCEEEEEEEeCCeEEEEEEECCCCc-eEeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCC
Q 008927 364 SHGEKNLIACSYRQNGRSYLGILDDFGHS-LSLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDD 433 (548)
Q Consensus 364 ~~~d~~~l~~~~~~~g~~~L~~~dl~~g~-~~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~ 433 (548)
.++.|++....+ ..|+++|+++++ ...+..+...+..+ +++++.|++.... ...|++++++.
T Consensus 235 ---~~G~l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~~ 299 (314)
T 1pjx_A 235 ---EDNNLLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQR 299 (314)
T ss_dssp ---TTCCEEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECSS
T ss_pred ---CCCCEEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCCC
Confidence 234565543322 368889988564 34444443333333 4666666655432 35888988754
No 231
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.84 E-value=0.00011 Score=81.29 Aligned_cols=210 Identities=10% Similarity=0.062 Sum_probs=116.2
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCC---CCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKA---GDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD 164 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~---~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~ 164 (548)
..+..+.+++ +++|||.... .++ |++++.++ +.....+....+. .+ .|.++.+.++.|||++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~---~~~--I~~~~~~g~~~~~~~~~~i~~~~~--~P----~glavD~~~g~LY~tD~~~ 474 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLS---QRM--ICSTQLDRAHGVSSYDTVISRDIQ--AP----DGLAVDWIHSNIYWTDSVL 474 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTT---TTS--BEEEESCCCCC-CCCCCBCCSCC----C----CCEECCCSSSBCEECCTTT
T ss_pred cceEEEccccccCeEEEEecC---CCe--EEEEecCCCCCCcceEEEEeCCCC--Cc----ceEEEEeeCCcEEEEeccC
Confidence 4556778888 8899998632 233 55544432 0122222221111 11 1223334467899987777
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee-cC
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GS 243 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~-~~ 243 (548)
++|+++++++ ...+.|.... ...-.+++++|++.+|++. ... ....|+++++++.. .+.|.. .-
T Consensus 475 ~~I~v~d~dg--~~~~~l~~~~---~~~P~giavDp~~g~ly~t-d~~------~~~~I~~~~~dG~~---~~~l~~~~l 539 (699)
T 1n7d_A 475 GTVSVADTKG--VKRKTLFREQ---GSKPRAIVVDPVHGFMYWT-DWG------TPAKIKKGGLNGVD---IYSLVTENI 539 (699)
T ss_dssp SCEEEEBSSS--CCEEEECCCS---SCCCCCEECCSSSSCCEEC-CCS------SSCCEEBCCSSSCC---CCEESCSSC
T ss_pred CeEEEEecCC--CceEEEEeCC---CCCcceEEEccCCCcEEEc-ccC------CCCeEEEEeCCCCC---eeEEEeCCC
Confidence 8999999987 5555554321 1233467789988776553 221 12579999998765 555432 22
Q ss_pred CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCC
Q 008927 244 DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNG 323 (548)
Q Consensus 244 ~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g 323 (548)
.+-...+|+|++++|+|... ....|+++++++ .. ++.+.... ........+.. |++.+|++|. +
T Consensus 540 ~~PnGlavd~~~~~LY~aD~-------~~~~I~~~d~dG-~~---~~~~~~~~-~~~~~P~glav--d~~~lywtd~--~ 603 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDS-------KLHSISSIDVNG-GN---RKTILEDE-KRLAHPFSLAV--FEDKVFWTDI--I 603 (699)
T ss_dssp SSCCCEEECTTTCCEEEEET-------TTTEEEEECSSS-SC---CEEECCCS-SSCSSCCCCEE--ETTEEEEECS--T
T ss_pred CCccEEEEeccCCEEEEEec-------CCCeEEEEccCC-Cc---eEEEEecC-CcCCCceEeEE--ECCEEEEEeC--C
Confidence 22345689999998987652 245799999873 22 23332211 00011222333 4453444544 2
Q ss_pred eeeEEEEeccCCeeEee
Q 008927 324 FWNLHKWIESNNEVLAI 340 (548)
Q Consensus 324 ~~~Ly~~d~~~g~~~~l 340 (548)
...|++++..+|+...+
T Consensus 604 ~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 604 NEAIFSANRLTGSDVNL 620 (699)
T ss_dssp TTCEEEEETTTEEEEEC
T ss_pred CCeEEEEEccCCCceEE
Confidence 34788998877765443
No 232
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.83 E-value=0.001 Score=66.84 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=90.2
Q ss_pred CCEEEEE-eCCCCeEEEEeCCCCCCC-----------------ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC
Q 008927 154 GDTVIFS-NYKDQRLYKHSIDSKDSS-----------------PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD 215 (548)
Q Consensus 154 ~~~i~F~-~~~~~~Ly~~~~~~~~~~-----------------~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~ 215 (548)
...+++. ...++.|.+.++.. +. .+.+... ...+....|+|||+.|+....+
T Consensus 147 ~~~la~~sg~~~g~v~iwd~~~--~~~~~~~~~~~~~~~~~p~~~~~~~h----~~~v~~~~~s~~g~~l~s~s~d---- 216 (355)
T 3vu4_A 147 NGLLVYSNEFNLGQIHITKLQS--SGSATTQDQGVQQKAILGKGVLIKAH----TNPIKMVRLNRKSDMVATCSQD---- 216 (355)
T ss_dssp TTEEEEEESSCTTCEEEEECCC--------------------CCEEECCC----SSCEEEEEECTTSSEEEEEETT----
T ss_pred ccEEEEeCCCcCcEEEEEECCC--CCccccccccccccccCcccEEEEcc----CCceEEEEECCCCCEEEEEeCC----
Confidence 3678887 45678888888875 32 2333332 2346678899999987765433
Q ss_pred CCCceeE-EEEEECCCCCccCcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE
Q 008927 216 ALNSTTE-IVAIALNGQNIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV 292 (548)
Q Consensus 216 ~~~~~~~-l~~idl~~g~~~~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l 292 (548)
.. |.++|+.+++. ...+.. ....+....|||||++|+-.+. ...|.+.++..... .....+
T Consensus 217 -----~~~v~iwd~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~--------d~~v~iw~~~~~~~-~~~~~~ 280 (355)
T 3vu4_A 217 -----GTIIRVFKTEDGVL--VREFRRGLDRADVVDMKWSTDGSKLAVVSD--------KWTLHVFEIFNDQD-NKRHAL 280 (355)
T ss_dssp -----CSEEEEEETTTCCE--EEEEECTTCCSCEEEEEECTTSCEEEEEET--------TCEEEEEESSCCSC-CCSEET
T ss_pred -----CCEEEEEECCCCcE--EEEEEcCCCCCcEEEEEECCCCCEEEEEEC--------CCEEEEEEccCCCC-cccccc
Confidence 34 78889998872 333442 3445677899999999885542 34678888864221 111111
Q ss_pred cC-----C------------CCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEec
Q 008927 293 AG-----F------------DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (548)
Q Consensus 293 ~~-----~------------~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~ 332 (548)
.. . ............|++||+.+++... +|.+.+|.+..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~-dg~~~~~~~~~ 336 (355)
T 3vu4_A 281 KGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPH-TRMIETFKVVF 336 (355)
T ss_dssp TTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETT-TTEEEEEEEEE
T ss_pred cceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeC-CCeEEEEEEEc
Confidence 00 0 0000011245789999995555554 67777776653
No 233
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=97.83 E-value=1.3e-05 Score=77.93 Aligned_cols=80 Identities=14% Similarity=0.038 Sum_probs=56.2
Q ss_pred CCccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccCh-HHHHHHhcC---cEEEEeC
Q 008927 456 SYFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL-SIQYWTSRG---WAFVDVN 531 (548)
Q Consensus 456 ~~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~-~~Q~~asrG---yaVl~~N 531 (548)
..+...+.+++++..+|.++..++|.|.+ |++ +++||+|+++|||+.......+.. ..++.+++| ++|+.+|
T Consensus 13 ~~~~~~~~~~~~s~~~g~~~~~~v~~P~~--~~~--~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~ 88 (275)
T 2qm0_A 13 IITSNTEQWKMYSKLEGKEYQIHISKPKQ--PAP--DSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVG 88 (275)
T ss_dssp CCCTTEEEEEEECTTTCCEEEEEEECCSS--CCC--TTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEE
T ss_pred eecCCceEEEEEecCCCCEEEEEEECCCC--CCC--CCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEEC
Confidence 45667788999985368899999999965 543 578999999999986322111111 112234578 9999999
Q ss_pred CCCCCCCC
Q 008927 532 YGGSTGLS 539 (548)
Q Consensus 532 yRGStGyG 539 (548)
|||+..|+
T Consensus 89 ~~~~~~~~ 96 (275)
T 2qm0_A 89 YPIEGAFS 96 (275)
T ss_dssp CSCSSSCC
T ss_pred CCCCCcCc
Confidence 99975443
No 234
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=97.82 E-value=2.2e-05 Score=75.78 Aligned_cols=69 Identities=14% Similarity=0.072 Sum_probs=50.5
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCC-CCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNP-IYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~-~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
+.++++. +|.++...+|.|.+. ++. ..++.|+||++|||... .....|....+.|+++||.|+.+||||
T Consensus 5 ~~~~~~~--~~~~~~~~~~~p~~~~~~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 75 (277)
T 3bxp_A 5 EQRTLNT--AAHPFQITAYWLDQISDFE--TAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQL 75 (277)
T ss_dssp EEEEECS--TTCCEEEEEEEECCCCSSS--CCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEEecc--CCCcceEEEEeCCcccccc--cCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEeccc
Confidence 4566654 688899999988621 121 24567999999998743 233345566788999999999999999
No 235
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.82 E-value=0.01 Score=57.96 Aligned_cols=234 Identities=11% Similarity=0.013 Sum_probs=121.8
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCC---c-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSS---P-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~---~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~ 224 (548)
+|+|+++.++++...|+.|.+-++...+.. + +.+... ...+....|+|||+.|+....+ ..|.
T Consensus 45 ~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h----~~~V~~~~~s~dg~~l~s~~~d---------~~i~ 111 (340)
T 4aow_A 45 ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH----SHFVSDVVISSDGQFALSGSWD---------GTLR 111 (340)
T ss_dssp EECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC----SSCEEEEEECTTSSEEEEEETT---------SEEE
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC----CCCEEEEEECCCCCEEEEEccc---------ccce
Confidence 456665556666556664444444331011 1 122222 2245677899999987765433 3577
Q ss_pred EEECCCCCccCcEEe-eecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCC
Q 008927 225 AIALNGQNIQEPKVL-VSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (548)
Q Consensus 225 ~idl~~g~~~~~~~L-~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~ 303 (548)
.++...+. .... ...........++++++.|+-... ...+.+.++.. .. ......... . ..+
T Consensus 112 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~s~--------d~~~~~~d~~~-~~--~~~~~~~~~-~--~~v 174 (340)
T 4aow_A 112 LWDLTTGT---TTRRFVGHTKDVLSVAFSSDNRQIVSGSR--------DKTIKLWNTLG-VC--KYTVQDESH-S--EWV 174 (340)
T ss_dssp EEETTTTE---EEEEEECCSSCEEEEEECTTSSCEEEEET--------TSCEEEECTTS-CE--EEEECSSSC-S--SCE
T ss_pred EEeecccc---eeeeecCCCCceeEEEEeecCccceeecC--------CCeEEEEEeCC-Cc--eEEEEeccc-c--Ccc
Confidence 88887765 3332 223334556678999998875442 23466667653 21 111111111 1 345
Q ss_pred cCceECcCCc-EEEE-EeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeE
Q 008927 304 TEPKWSSKGE-LFFV-TDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (548)
Q Consensus 304 ~~~~wspDG~-L~~~-sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~ 381 (548)
....|++++. .+++ ... ++ .|..+++.+++....... ...+ .....+.| +++.| ++...++.
T Consensus 175 ~~~~~~~~~~~~~~~s~~~-d~--~i~i~d~~~~~~~~~~~~---h~~~-----v~~~~~s~---~~~~l-~s~s~Dg~- 238 (340)
T 4aow_A 175 SCVRFSPNSSNPIIVSCGW-DK--LVKVWNLANCKLKTNHIG---HTGY-----LNTVTVSP---DGSLC-ASGGKDGQ- 238 (340)
T ss_dssp EEEEECSCSSSCEEEEEET-TS--CEEEEETTTTEEEEEECC---CSSC-----EEEEEECT---TSSEE-EEEETTCE-
T ss_pred cceEEccCCCCcEEEEEcC-CC--EEEEEECCCCceeeEecC---CCCc-----EEEEEECC---CCCEE-EEEeCCCe-
Confidence 6678888876 4444 333 33 466677777765433221 0111 12244553 55544 45555554
Q ss_pred EEEEEECCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 382 YLGILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 382 ~L~~~dl~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
|.++|+.+++.. .+... ..+..+ +++ +.++..+. ...|.++|++++.
T Consensus 239 -i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~-~~~~~~~~----d~~i~iwd~~~~~ 288 (340)
T 4aow_A 239 -AMLWDLNEGKHLYTLDGG-DIINALCFSPN-RYWLCAAT----GPSIKIWDLEGKI 288 (340)
T ss_dssp -EEEEETTTTEEEEEEECS-SCEEEEEECSS-SSEEEEEE----TTEEEEEETTTTE
T ss_pred -EEEEEeccCceeeeecCC-ceEEeeecCCC-CceeeccC----CCEEEEEECCCCe
Confidence 556687776543 33222 223333 343 34443333 2578888987664
No 236
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.82 E-value=0.0039 Score=61.89 Aligned_cols=189 Identities=11% Similarity=0.002 Sum_probs=103.0
Q ss_pred CCeEEEEeCCCCCCC-ceecCCCCCCCCceecceeeCC--CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 164 DQRLYKHSIDSKDSS-PLPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~-~~~lT~~~~~~~~~~~~~~~Sp--DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
++.+...++.. ++ .+.+.... ...+....|+| +|+.++....+ ..|.++|+.+++ ...+.
T Consensus 103 ~~~~~~~~~~~--~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~s~s~d---------g~i~~wd~~~~~---~~~~~ 165 (343)
T 3lrv_A 103 GNQITILDSKT--NKVLREIEVDS---ANEIIYMYGHNEVNTEYFIWADNR---------GTIGFQSYEDDS---QYIVH 165 (343)
T ss_dssp TTEEEEEETTT--CCEEEEEECCC---SSCEEEEECCC---CCEEEEEETT---------CCEEEEESSSSC---EEEEE
T ss_pred cCceEEeecCC--cceeEEeecCC---CCCEEEEEcCCCCCCCEEEEEeCC---------CcEEEEECCCCc---EEEEE
Confidence 34555666655 43 23333211 12356778999 99987765433 358888999887 54333
Q ss_pred ec--CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC-CCCCcccCCcCceECcCCcEEEE
Q 008927 241 SG--SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FDPTIVESPTEPKWSSKGELFFV 317 (548)
Q Consensus 241 ~~--~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~-~~~~~~~~~~~~~wspDG~L~~~ 317 (548)
.. ...+....|+|||+.|+-.. ....|.+.|+.. ++. ....+.. .. ..+....|+|||++++.
T Consensus 166 ~~~~~~~i~~~~~~pdg~~lasg~--------~dg~i~iwd~~~-~~~-~~~~~~~~h~----~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDSLLLALYS--------PDGILDVYNLSS-PDQ-ASSRFPVDEE----AKIKEVKFADNGYWMVV 231 (343)
T ss_dssp CCCSSCCCCEEEECTTSCEEEEEC--------TTSCEEEEESSC-TTS-CCEECCCCTT----SCEEEEEECTTSSEEEE
T ss_pred ecCCCCceEEEEECCCCCEEEEEc--------CCCEEEEEECCC-CCC-CccEEeccCC----CCEEEEEEeCCCCEEEE
Confidence 22 22356778999999887333 135689999985 431 1133443 22 56788999999995444
Q ss_pred EeCCCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 318 TDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
... + .|..+|+.+++.. .+..... .....+...+.|.| +++.|+.....++.-+||.++.....+.
T Consensus 232 ~~~--~--~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 232 ECD--Q--TVVCFDLRKDVGTLAYPTYTI----PEFKTGTVTYDIDD---SGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp EES--S--BEEEEETTSSTTCBSSCCCBC---------CCEEEEECT---TSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred EeC--C--eEEEEEcCCCCcceeeccccc----ccccccceEEEECC---CCCEEEEecCCCCcEEEEEEcccccceE
Confidence 433 2 6888888766432 1211000 00001111255654 6665553332266666666654333333
No 237
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=97.81 E-value=2.3e-05 Score=77.12 Aligned_cols=69 Identities=16% Similarity=0.237 Sum_probs=50.6
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccc-cccCccChHHHHHHhcCcEEEEeCCCCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTS-EARGILNLSIQYWTSRGWAFVDVNYGGSTGLS 539 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~-~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG 539 (548)
.+.|.|. . ++. ...+|.|.+ ..++.|+||++|||.+. .....+....+.|+++||+|+.+||||+.+..
T Consensus 58 ~~~i~y~-~-~~~--~~~~~~p~~------~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~ 127 (303)
T 4e15_A 58 VDHLRYG-E-GRQ--LVDVFYSEK------TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT 127 (303)
T ss_dssp EEEEECS-S-TTC--EEEEEECTT------CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC
T ss_pred eeeeccC-C-CCc--EEEEEecCC------CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC
Confidence 4456676 4 554 455666753 14578999999999753 33345667789999999999999999998764
No 238
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=97.80 E-value=3.1e-05 Score=73.69 Aligned_cols=65 Identities=23% Similarity=0.201 Sum_probs=50.7
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 464 i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
++++. ||.+++++++.|.+. +++.|+||++||.+.......|....+.|+++||.|+.+|+||..
T Consensus 4 ~~~~~--~g~~l~~~~~~p~~~------~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G 68 (251)
T 2wtm_A 4 MYIDC--DGIKLNAYLDMPKNN------PEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHG 68 (251)
T ss_dssp EEEEE--TTEEEEEEEECCTTC------CSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTST
T ss_pred eEEec--CCcEEEEEEEccCCC------CCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCC
Confidence 55665 899999999998531 235699999999887633345666778999999999999999853
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.80 E-value=0.005 Score=59.17 Aligned_cols=198 Identities=10% Similarity=0.076 Sum_probs=108.6
Q ss_pred cceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCc
Q 008927 194 ADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKA 273 (548)
Q Consensus 194 ~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~ 273 (548)
..+.++||| + +|++.... ..+.|.++|+++++. .+.+.-+.. .....+.++|++|+.+.| ...
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~-----~~s~v~~iD~~tg~v--~~~i~l~~~-~fgeGi~~~g~~lyv~t~-------~~~ 86 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLY-----GRSSVRQVALQTGKV--ENIHKMDDS-YFGEGLTLLNEKLYQVVW-------LKN 86 (266)
T ss_dssp EEEEECSTT-E-EEEEECST-----TTCEEEEEETTTCCE--EEEEECCTT-CCEEEEEEETTEEEEEET-------TCS
T ss_pred ccEEEeCCC-e-EEEECCCC-----CCCEEEEEECCCCCE--EEEEecCCC-cceEEEEEeCCEEEEEEe-------cCC
Confidence 456789985 4 55544321 136899999999982 223322222 122235556888765553 356
Q ss_pred eEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCccc
Q 008927 274 ELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWV 353 (548)
Q Consensus 274 ~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~ 353 (548)
.++++|.++ .++ ...+.-.. . + ....++||+.+|+++. + ..|+.+|+++.++..-.+.... +.|.
T Consensus 87 ~v~viD~~t-~~v--~~~i~~g~-~--~---g~glt~Dg~~l~vs~g-s--~~l~viD~~t~~v~~~I~Vg~~-~~p~-- 151 (266)
T 2iwa_A 87 IGFIYDRRT-LSN--IKNFTHQM-K--D---GWGLATDGKILYGSDG-T--SILYEIDPHTFKLIKKHNVKYN-GHRV-- 151 (266)
T ss_dssp EEEEEETTT-TEE--EEEEECCS-S--S---CCEEEECSSSEEEECS-S--SEEEEECTTTCCEEEEEECEET-TEEC--
T ss_pred EEEEEECCC-CcE--EEEEECCC-C--C---eEEEEECCCEEEEECC-C--CeEEEEECCCCcEEEEEEECCC-Cccc--
Confidence 899999874 442 22332211 0 1 2346779994446653 3 4899999988775432211000 0110
Q ss_pred ccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCC-------------ceeEee--eecCCEEEEEE
Q 008927 354 FGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPF-------------TDIDNI--TLGNDCLFVEG 417 (548)
Q Consensus 354 ~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~-------------~~~~~~--s~d~~~l~~~~ 417 (548)
...+.+.+. + +.||... .....|.++|++++++. .+..+. ....++ ++++++++++.
T Consensus 152 ~~~nele~~----d-g~lyvn~--~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 152 IRLNELEYI----N-GEVWANI--WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp CCEEEEEEE----T-TEEEEEE--TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred ccceeEEEE----C-CEEEEec--CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 001123342 3 4666432 23457999999999864 443320 123444 56778877665
Q ss_pred ecCCCCCeEEEEEcCC
Q 008927 418 ASGVEPSSVAKVTLDD 433 (548)
Q Consensus 418 ss~~~p~~l~~~d~~~ 433 (548)
. .-+.|+.+++..
T Consensus 225 k---~~~~v~~i~l~~ 237 (266)
T 2iwa_A 225 K---LWPKLFEIKLHL 237 (266)
T ss_dssp T---TCSEEEEEEEEE
T ss_pred C---CCCeEEEEEEec
Confidence 3 346888888643
No 240
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=97.79 E-value=2.5e-05 Score=75.58 Aligned_cols=69 Identities=12% Similarity=0.006 Sum_probs=50.4
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC-ccChHHHHHHhcCcEEEEeCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNYG 533 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~-~~~~~~Q~~asrGyaVl~~NyR 533 (548)
.+.+++.+..+|.+++.++|.|.+ ++ +++++|+||++||++...... .+....++++++||+|+.||.+
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~--~~--~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~ 84 (280)
T 3ls2_A 15 HKQYTHSAVSTHCTMRFAVFLPPG--AS--ESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTS 84 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECTT--CB--TTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSS
T ss_pred EEEEEEechhcCCceEEEEEcCCC--CC--CCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCc
Confidence 456677664378999999999965 43 267899999999997654321 1123457888899999999953
No 241
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.76 E-value=0.0072 Score=57.28 Aligned_cols=223 Identities=12% Similarity=0.083 Sum_probs=112.5
Q ss_pred EEEE-EeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 156 TVIF-SNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 156 ~i~F-~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
.|++ .+..++.|++++.++ ...+.+... .......+.+++||+ |++. .. . ..|+++|.+++.
T Consensus 36 ~l~v~~~~~~~~i~~~~~~~--~~~~~~~~~---~~~~p~~i~~~~~g~-l~v~-~~-~-------~~i~~~d~~~~~-- 98 (270)
T 1rwi_B 36 NVYVTSEGMYGRVVKLATGS--TGTTVLPFN---GLYQPQGLAVDGAGT-VYVT-DF-N-------NRVVTLAAGSNN-- 98 (270)
T ss_dssp CEEEEECSSSCEEEEECC-------EECCCC---SCCSCCCEEECTTCC-EEEE-ET-T-------TEEEEECTTCSC--
T ss_pred CEEEEccCCCCcEEEecCCC--cccceEeeC---CcCCcceeEECCCCC-EEEE-cC-C-------CEEEEEeCCCce--
Confidence 5776 545567899998765 443433221 112345678999988 4333 32 1 379999998876
Q ss_pred CcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 235 EPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 235 ~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
...+.. +........++|||+ | |+... ....|++++... .. ........ . .......+++||+
T Consensus 99 -~~~~~~~~~~~p~~i~~~~~g~-l-~v~~~------~~~~i~~~~~~~-~~---~~~~~~~~-~--~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 99 -QTVLPFDGLNYPEGLAVDTQGA-V-YVADR------GNNRVVKLAAGS-KT---QTVLPFTG-L--NDPDGVAVDNSGN 162 (270)
T ss_dssp -CEECCCCSCSSEEEEEECTTCC-E-EEEEG------GGTEEEEECTTC-CS---CEECCCCS-C--CSCCCEEECTTCC
T ss_pred -EeeeecCCcCCCcceEECCCCC-E-EEEEC------CCCEEEEEECCC-ce---eEeecccc-C--CCceeEEEeCCCC
Confidence 544432 223345667899997 4 44422 134688775331 21 11111111 0 2456788999998
Q ss_pred EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 314 LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
||+.... . ..|++++.+++........ ....| ..+.+.+ ++ .|++... +...|++++.++...
T Consensus 163 l~v~~~~-~--~~i~~~~~~~~~~~~~~~~--~~~~p------~~i~~d~---~g-~l~v~~~--~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 163 VYVTDTD-N--NRVVKLEAESNNQVVLPFT--DITAP------WGIAVDE---AG-TVYVTEH--NTNQVVKLLAGSTTS 225 (270)
T ss_dssp EEEEEGG-G--TEEEEECTTTCCEEECCCS--SCCSE------EEEEECT---TC-CEEEEET--TTSCEEEECTTCSCC
T ss_pred EEEEECC-C--CEEEEEecCCCceEeeccc--CCCCc------eEEEECC---CC-CEEEEEC--CCCcEEEEcCCCCcc
Confidence 6555432 2 3688999876654433211 11111 1233431 33 5655432 234578888866554
Q ss_pred EeecC-CCceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 394 SLLDI-PFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 394 ~~l~~-~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
..+.. .......+ ++++ .+|+.... ...|.++++.
T Consensus 226 ~~~~~~~~~~p~~i~~~~~g-~l~v~~~~---~~~v~~~~~~ 263 (270)
T 1rwi_B 226 TVLPFTGLNTPLAVAVDSDR-TVYVADRG---NDRVVKLTSL 263 (270)
T ss_dssp EECCCCSCSCEEEEEECTTC-CEEEEEGG---GTEEEEECCC
T ss_pred eeeccCCCCCceeEEECCCC-CEEEEECC---CCEEEEEcCC
Confidence 43322 12223333 3333 34444322 2456666543
No 242
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.00074 Score=75.30 Aligned_cols=157 Identities=10% Similarity=0.109 Sum_probs=88.8
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
.|+++++.|+.. ..++.|.+.++.++.+.. ..+... ...+..+.|+|+ |+.|+....+ ..|.+
T Consensus 16 ~~s~dg~~latg-~~dg~I~vwd~~~~~~~~~~~l~~h----~~~V~~l~~s~~~~~~~l~s~s~D---------g~I~v 81 (753)
T 3jro_A 16 VLDYYGKRLATC-SSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD---------GKVLI 81 (753)
T ss_dssp CCCSSSCCEEEE-ETTTEEEEEEEETTEEEEEEEECCC----SSCEEEEEECCTTSCSEEEEEETT---------SCEEE
T ss_pred EECCCCCeEEEE-ECCCcEEEEecCCCCCccceeccCC----cCceEEEEecCCCCCCEEEEEeCC---------CeEEE
Confidence 455566655544 356666666665310111 223222 234567789988 8887776443 25777
Q ss_pred EECCCCCccCcEEeeecCCceeeeEECCC--CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESP 303 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~SPD--Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~ 303 (548)
+|+.+++......+......+....|+|+ |+.|+.... ...|.+.++...... ....+.+.. ..+
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~--------dg~I~vwdl~~~~~~-~~~~~~~~~----~~v 148 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS--------DGKVSVVEFKENGTT-SPIIIDAHA----IGV 148 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--------TSEEEEEECCSSSCC-CCEEEECCS----SCE
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC--------CCcEEEEEeecCCCc-ceeEeecCC----Cce
Confidence 78877741002233333445677899999 888875541 357889998753221 223344433 457
Q ss_pred cCceECc-------------CCcEEEEEeCCCCeeeEEEEeccCC
Q 008927 304 TEPKWSS-------------KGELFFVTDRKNGFWNLHKWIESNN 335 (548)
Q Consensus 304 ~~~~wsp-------------DG~L~~~sd~~~g~~~Ly~~d~~~g 335 (548)
....|+| ||+++++... +|. |..+|+.++
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~--I~iwd~~~~ 190 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGA-DNL--VKIWKYNSD 190 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEET-TSC--EEEEEEETT
T ss_pred EEEEecCcccccccccccCCCCCEEEEEEC-CCe--EEEEeccCC
Confidence 7888999 5775555444 454 444554444
No 243
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=97.76 E-value=3.2e-05 Score=73.93 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=53.4
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
..+.+.++. ||.+++++++.|.+ ++.|+||++||++.......|....+.|+.+||.|+.+|+||-..
T Consensus 21 ~~~~~~~~~--~g~~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 88 (270)
T 3pfb_A 21 GMATITLER--DGLQLVGTREEPFG--------EIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGD 88 (270)
T ss_dssp EEEEEEEEE--TTEEEEEEEEECSS--------SSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred cceEEEecc--CCEEEEEEEEcCCC--------CCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccC
Confidence 345666665 89999999999853 346999999999876544446677788999999999999998543
No 244
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=97.75 E-value=2.6e-05 Score=77.98 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=50.9
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC---ccChHHHHHH-hcCcEEEEeCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG---ILNLSIQYWT-SRGWAFVDVNYGGST 536 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~---~~~~~~Q~~a-srGyaVl~~NyRGSt 536 (548)
.+.+.+.+. ++ +...+|.|++.. . ++++.|+||++|||....... .|....+.|+ ++||.|+.+||||+.
T Consensus 55 ~~~v~~~~~-~~--~~~~~~~P~~~~-~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~ 128 (338)
T 2o7r_A 55 TKDLALNPL-HN--TFVRLFLPRHAL-Y--NSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAP 128 (338)
T ss_dssp EEEEEEETT-TT--EEEEEEEEGGGG-G--SSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred EEEEEecCC-CC--eEEEEEeCCCCC-c--CCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCC
Confidence 456667653 44 677788886420 1 246789999999998543322 2556677888 799999999999987
Q ss_pred CCC
Q 008927 537 GLS 539 (548)
Q Consensus 537 GyG 539 (548)
.+.
T Consensus 129 ~~~ 131 (338)
T 2o7r_A 129 EHR 131 (338)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 245
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=97.75 E-value=3.9e-05 Score=74.39 Aligned_cols=70 Identities=13% Similarity=0.028 Sum_probs=50.8
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-cChHHHHHHhcCcEEEEeC--CCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVN--YGGST 536 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-~~~~~Q~~asrGyaVl~~N--yRGSt 536 (548)
+.+++.+..+|.++...+|.|.+ ++ ++++|+||++||++....... .....++++.+||+|+.|| +||.+
T Consensus 23 ~~~~~~s~~~~~~~~~~v~~P~~--~~---~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~ 95 (283)
T 4b6g_A 23 QVWAHHAQTLQCEMKFAVYLPNN--PE---NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQ 95 (283)
T ss_dssp EEEEEEETTTTEEEEEEEEECCC--TT---CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTT
T ss_pred EEEEEechhhCCceEEEEEeCCC--CC---CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEecccccccc
Confidence 44556554378999999999965 32 468999999999976543221 1234578889999999999 56764
No 246
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.75 E-value=0.016 Score=55.86 Aligned_cols=233 Identities=8% Similarity=0.002 Sum_probs=118.4
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~ 233 (548)
+.+++....++.|++++.+. |+. .++.... .....+..++|||+.|+ +.+ ..|+.+|. +|+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~t--G~~~w~~~~~~---~~~~~~~~~~pdG~ilv--s~~---------~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDT--KEIVWEYPLEK---GWECNSVAATKAGEILF--SYS---------KGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECTTCSEEEEEETTT--TEEEEEEECCT---TCCCCEEEECTTSCEEE--ECB---------SEEEEECT-TSCE
T ss_pred CcEEEeeCCCCEEEEEECCC--CeEEEEeCCCc---cCCCcCeEECCCCCEEE--eCC---------CCEEEECC-CCCE
Confidence 46777776778899998854 333 3333321 11345667999998655 222 36899999 5551
Q ss_pred cCcEEeeecC-CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 234 QEPKVLVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 234 ~~~~~L~~~~-~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
...+..+. .......++|||+.|+ .... ....++.++. +|++.....+.................+||
T Consensus 68 --~W~~~~~~~~~~~~~~~~~dG~~lv-~~~~------~~~~v~~vd~--~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G 136 (276)
T 3no2_A 68 --LWNIAAPAGCEMQTARILPDGNALV-AWCG------HPSTILEVNM--KGEVLSKTEFETGIERPHAQFRQINKNKKG 136 (276)
T ss_dssp --EEEEECCTTCEEEEEEECTTSCEEE-EEES------TTEEEEEECT--TSCEEEEEEECCSCSSGGGSCSCCEECTTS
T ss_pred --EEEEcCCCCccccccEECCCCCEEE-EecC------CCCEEEEEeC--CCCEEEEEeccCCCCcccccccCceECCCC
Confidence 33343322 2345667899999765 3321 1346776664 454211112221100000122344678899
Q ss_pred cEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 313 ~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
++++.... . ..|+.+|++ |+...-.... .+..+ ...++ +++.| +....+ ..|+.+|+++|+
T Consensus 137 ~~lv~~~~-~--~~v~~~d~~-G~~~w~~~~~------~~~~~---~~~~~---~g~~~-v~~~~~--~~v~~~d~~tG~ 197 (276)
T 3no2_A 137 NYLVPLFA-T--SEVREIAPN-GQLLNSVKLS------GTPFS---SAFLD---NGDCL-VACGDA--HCFVQLNLESNR 197 (276)
T ss_dssp CEEEEETT-T--TEEEEECTT-SCEEEEEECS------SCCCE---EEECT---TSCEE-EECBTT--SEEEEECTTTCC
T ss_pred CEEEEecC-C--CEEEEECCC-CCEEEEEECC------CCccc---eeEcC---CCCEE-EEeCCC--CeEEEEeCcCCc
Confidence 85554322 3 368899987 6643222111 11111 12221 44444 333222 358999999786
Q ss_pred eE-eecC---C---CceeEee-eecCCEEEEEEecCC-------CCCeEEEEEcCCCc
Q 008927 393 LS-LLDI---P---FTDIDNI-TLGNDCLFVEGASGV-------EPSSVAKVTLDDHK 435 (548)
Q Consensus 393 ~~-~l~~---~---~~~~~~~-s~d~~~l~~~~ss~~-------~p~~l~~~d~~~~~ 435 (548)
+. ++.. + .....++ ...++.+++...... ....++.++. +|+
T Consensus 198 ~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~ 254 (276)
T 3no2_A 198 IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGK 254 (276)
T ss_dssp EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT-TSB
T ss_pred EEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC-CCC
Confidence 53 4431 1 1123333 233455555543221 2456777775 454
No 247
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=97.74 E-value=9.6e-05 Score=70.13 Aligned_cols=69 Identities=16% Similarity=0.107 Sum_probs=51.6
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccC-hHHHHHHhcCcEEEEeCCCCCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILN-LSIQYWTSRGWAFVDVNYGGSTGLS 539 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~-~~~Q~~asrGyaVl~~NyRGStGyG 539 (548)
+..++.+. ||.++++.+|.|.+ +++.|+||++|||+... ....|. ...++++.+ |.|+.+|+||+....
T Consensus 4 ~~~~~~~~-dg~~l~~~~~~p~~-------~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~ 74 (275)
T 3h04_A 4 IKYKVITK-DAFALPYTIIKAKN-------QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS 74 (275)
T ss_dssp EEEEEECT-TSCEEEEEEECCSS-------SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC
T ss_pred eEEEEecC-CcEEEEEEEEccCC-------CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc
Confidence 45677887 99999999999953 34579999999998422 223344 556677777 999999999886543
No 248
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.73 E-value=0.0063 Score=62.29 Aligned_cols=237 Identities=8% Similarity=-0.033 Sum_probs=129.0
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
+|+++|..|+-. ..++.|.+.++.. ++. +.+... ..+... ++++++.|+....+ ..++.+|
T Consensus 154 ~fspdg~~lasg-s~Dg~v~iWd~~~--~~~~~~~~~h----~~~v~~--~s~~~~~l~sgs~d---------~~i~~~d 215 (420)
T 4gga_A 154 AWIKEGNYLAVG-TSSAEVQLWDVQQ--QKRLRNMTSH----SARVGS--LSWNSYILSSGSRS---------GHIHHHD 215 (420)
T ss_dssp EECTTSSEEEEE-ETTSCEEEEETTT--TEEEEEECCC----SSCEEE--EEEETTEEEEEETT---------SEEEEEE
T ss_pred EECCCCCEEEEE-ECCCeEEEEEcCC--CcEEEEEeCC----CCceEE--EeeCCCEEEEEeCC---------CceeEee
Confidence 677777766554 3567777778875 433 333332 223333 44566765554322 3677788
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCce-eeeEEEcCCCCCcccCCcCc
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~-~~~~~l~~~~~~~~~~~~~~ 306 (548)
...... ....+...........|+|+|+.|+-... ...+.+.+...+... .......... ..+...
T Consensus 216 ~~~~~~-~~~~~~~h~~~~~~~~~~~~g~~l~s~~~--------D~~v~i~~~~~~~~~~~~~~~~~~~~----~~V~~~ 282 (420)
T 4gga_A 216 VRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGN--------DNLVNVWPSAPGEGGWVPLQTFTQHQ----GAVKAV 282 (420)
T ss_dssp TTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEET--------TSCEEEEESSCCSSCSCCSEEECCCS----SCEEEE
T ss_pred ecccce-eeEEecccccceeeeeecCCCCeeeeeec--------cccceEEeeccccccceeeeeecccC----Cceeee
Confidence 776541 02233333445667789999998875442 245777787642211 1122223222 456778
Q ss_pred eECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEE
Q 008927 307 KWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGI 385 (548)
Q Consensus 307 ~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~ 385 (548)
.|+|++. ++++..- ..-..|..+|+.+++.......... .....+.+ +++.|+.... .....|++
T Consensus 283 ~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~~~~~~~~~~~---------v~~~~~~~---~~~~lv~~sg-~~d~~I~i 348 (420)
T 4gga_A 283 AWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAHSQ---------VCSILWSP---HYKELISGHG-FAQNQLVI 348 (420)
T ss_dssp EECTTCTTEEEEEEC-TTTCEEEEEETTTTEEEEEEECSSC---------EEEEEEET---TTTEEEEEEC-TTTCCEEE
T ss_pred eeCCCcccEEEEEee-cCCCEEEEEeCCccccceeeccccc---------eeeeeecC---CCCeEEEEEe-cCCCEEEE
Confidence 9999987 7666432 2223577788888875443321111 11233443 6677765432 12345777
Q ss_pred EECCCCce-EeecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 386 LDDFGHSL-SLLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 386 ~dl~~g~~-~~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
+|+.+++. ..|......+..+ ++|+..|+ .++.. ..|.++|+...
T Consensus 349 wd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~-S~s~D---~tvriWdv~~~ 396 (420)
T 4gga_A 349 WKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAAD---ETLRLWRCFEL 396 (420)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEETT---TEEEEECCSCS
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEecC---CeEEEEECCCC
Confidence 88887764 3454333345544 67777554 44332 45666776443
No 249
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.72 E-value=0.0037 Score=60.72 Aligned_cols=204 Identities=9% Similarity=0.001 Sum_probs=104.6
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceec-CCCCCC-CCceecceeeCCCCCEEEEEEeccC-------CCCCCceeEEEE
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPI-TPDYGE-PLVSYADGIFDPRFNRYVTVREDRR-------QDALNSTTEIVA 225 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~l-T~~~~~-~~~~~~~~~~SpDG~~i~~v~~~~~-------~~~~~~~~~l~~ 225 (548)
+.|++... ...|++++.++ +.+.+ ...... ......++.++|||+. ++...... .........|++
T Consensus 83 g~l~v~~~-~~~l~~~d~~g---~~~~~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 83 NQLFVADM-RLGLLVVQTDG---TFEEIAKKDSEGRRMQGCNDCAFDYEGNL-WITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SEEEEEET-TTEEEEEETTS---CEEECCSBCTTSCBCBCCCEEEECTTSCE-EEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred CcEEEEEC-CCCEEEEeCCC---CEEEEEeccCCCccccCCcCEEECCCCCE-EEEecCcccccccccccccCCCCeEEE
Confidence 56766653 33799999873 44444 321100 1123456789999974 33322110 000112368999
Q ss_pred EECCCCCccCcEEeeecCCceeeeEEC----CCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCccc
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRMD----PRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~S----PDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~ 301 (548)
+|.+ ++ .+.+...........|+ |||+.|++.. . ....|++++++.+|.+.....+.........
T Consensus 158 ~~~~-g~---~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~-~------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 158 FTTD-GQ---MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAE-T------PTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp ECTT-SC---EEEEEEEESSEEEEEEEECTTSCEEEEEEEE-T------TTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred ECCC-CC---EEEeccCCCCcceEEEecccCCCCCEEEEEE-C------CCCeEEEEECCCCCccccceEEEECCCCCCC
Confidence 9987 65 55554332333456789 9998775443 1 1357999987633543222222211100001
Q ss_pred CCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeE
Q 008927 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRS 381 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~ 381 (548)
......+++||+||+.... .+ .|+++++++++........ ..+. ....+.+ +++.|++.... ..
T Consensus 227 ~p~~i~~d~~G~l~v~~~~-~~--~i~~~d~~~g~~~~~~~~~-----~~~~---~~i~~~~---dg~~l~v~~~~--~~ 290 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWG-SS--HIEVFGPDGGQPKMRIRCP-----FEKP---SNLHFKP---QTKTIFVTEHE--NN 290 (314)
T ss_dssp EEEEEEEBTTCCEEEEEET-TT--EEEEECTTCBSCSEEEECS-----SSCE---EEEEECT---TSSEEEEEETT--TT
T ss_pred CCCceEECCCCCEEEEEcC-CC--EEEEEcCCCCcEeEEEeCC-----CCCc---eeEEECC---CCCEEEEEeCC--CC
Confidence 1345678999987766433 22 6888998756542221110 0111 1233432 56657655422 23
Q ss_pred EEEEEECCC
Q 008927 382 YLGILDDFG 390 (548)
Q Consensus 382 ~L~~~dl~~ 390 (548)
.|++++++.
T Consensus 291 ~l~~~~~~~ 299 (314)
T 1pjx_A 291 AVWKFEWQR 299 (314)
T ss_dssp EEEEEECSS
T ss_pred eEEEEeCCC
Confidence 577787754
No 250
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.71 E-value=0.013 Score=56.84 Aligned_cols=205 Identities=12% Similarity=0.032 Sum_probs=103.9
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceec---CCCCCCCCceecceeeCC--CCCEEEEEEeccCCCCCCceeEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPI---TPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~l---T~~~~~~~~~~~~~~~Sp--DG~~i~~v~~~~~~~~~~~~~~l 223 (548)
.|++++..|+-. ..++.|.+.++..+....+.+ ... ...+..+.|+| |++.|+....+ ..|
T Consensus 18 ~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~d~~~l~s~~~d---------g~v 83 (351)
T 3f3f_A 18 VYDFYGRHVATC-SSDQHIKVFKLDKDTSNWELSDSWRAH----DSSIVAIDWASPEYGRIIASASYD---------KTV 83 (351)
T ss_dssp EECSSSSEEEEE-ETTSEEEEEEECSSSCCEEEEEEEECC----SSCEEEEEECCGGGCSEEEEEETT---------SCE
T ss_pred EEcCCCCEEEEe-eCCCeEEEEECCCCCCcceecceeccC----CCcEEEEEEcCCCCCCEEEEEcCC---------CeE
Confidence 466666655544 456766666665421221222 222 23466778999 68887765443 247
Q ss_pred EEEECCCCCcc-------CcEEeeecCCceeeeEECCC--CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE---
Q 008927 224 VAIALNGQNIQ-------EPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC--- 291 (548)
Q Consensus 224 ~~idl~~g~~~-------~~~~L~~~~~~~~~p~~SPD--Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~--- 291 (548)
.++|+.+++.. ....+......+....|+|+ |+.|+.... ...|.+.|+.....+.....
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--------dg~v~iwd~~~~~~~~~~~~~~~ 155 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN--------DGILRLYDALEPSDLRSWTLTSE 155 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--------TCEEEEEECSSTTCTTCCEEEEE
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC--------CCcEEEecCCChHHhcccccccc
Confidence 77777776310 01222233445677889999 998875541 35788889874322111110
Q ss_pred E---cCCCCCcccCCcCceECcC---CcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeec
Q 008927 292 V---AGFDPTIVESPTEPKWSSK---GELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSH 365 (548)
Q Consensus 292 l---~~~~~~~~~~~~~~~wspD---G~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~ 365 (548)
. .-........+....|+|+ ++++++... ++. +...+...++...+..... .... .....|.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-~~~--~~~~~~~~~~~~~~~~~~~---h~~~---i~~~~~~p-- 224 (351)
T 3f3f_A 156 MKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-EQA--IIYQRGKDGKLHVAAKLPG---HKSL---IRSISWAP-- 224 (351)
T ss_dssp EESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-TEE--EEEEECTTSCEEEEEECCC---CCSC---EEEEEECC--
T ss_pred ccccccccCCcccceeEEEeccCCCCCcEEEEecC-CCc--EEEEccCCCceeeeeecCC---CCcc---eeEEEECC--
Confidence 0 0000000034667899997 665555544 332 3333344555433321111 1111 12244553
Q ss_pred CCCC---EEEEEEEeCCeEEEEEEE
Q 008927 366 GEKN---LIACSYRQNGRSYLGILD 387 (548)
Q Consensus 366 ~d~~---~l~~~~~~~g~~~L~~~d 387 (548)
++. .++++...++.-.+|-+.
T Consensus 225 -~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 225 -SIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp -CSSCSSEEEEEEETTSCEEEEEEE
T ss_pred -CCCCcceEEEEEcCCCeEEEEeCC
Confidence 431 566666667766665444
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.69 E-value=0.01 Score=58.42 Aligned_cols=236 Identities=12% Similarity=0.076 Sum_probs=120.2
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCC--C--------------CCceecceeeCCCCCEEEEEEeccCCCCCC
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYG--E--------------PLVSYADGIFDPRFNRYVTVREDRRQDALN 218 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~--~--------------~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~ 218 (548)
+.++|+...+++|++++.++ +..+.+..... . ...+...+.++++...|++ ....
T Consensus 30 g~~l~v~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-~d~~------ 100 (322)
T 2fp8_A 30 NKGFYTSVQDGRVIKYEGPN--SGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-VDCY------ 100 (322)
T ss_dssp CSSEEEECTTSEEEEECCTT--TCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-EETT------
T ss_pred CCEEEEEcCCCeEEEECCCC--CceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-EECC------
Confidence 35677776778999998876 44443321000 0 0012234567873344443 3321
Q ss_pred ceeEEEEEECCCCCccCcEEeeec-C----CceeeeEECC-CCCEEEEEEecCCCCC-----------CCCceEEEEEec
Q 008927 219 STTEIVAIALNGQNIQEPKVLVSG-S----DFYAFPRMDP-RGERMAWIEWHHPNMP-----------WDKAELWVGYIS 281 (548)
Q Consensus 219 ~~~~l~~idl~~g~~~~~~~L~~~-~----~~~~~p~~SP-DGk~La~~~~~~~~~p-----------~~~~~L~v~~~~ 281 (548)
..|+++|.+++. .+.+... . .+.....++| ||+ | |+........ -....|+.++.+
T Consensus 101 --~~i~~~d~~~g~---~~~~~~~~~~~~~~~p~~i~~d~~~G~-l-~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 101 --YHLSVVGSEGGH---ATQLATSVDGVPFKWLYAVTVDQRTGI-V-YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp --TEEEEECTTCEE---CEEEESEETTEECSCEEEEEECTTTCC-E-EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred --CCEEEEeCCCCE---EEEecccCCCCcccccceEEEecCCCE-E-EEECCcccccccccceehcccCCCceEEEEeCC
Confidence 248999988776 5555321 1 1234567899 886 4 4442110000 013578888876
Q ss_pred CCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCC---eeEeecccccccCCCcccccCcc
Q 008927 282 ENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN---EVLAIYSLDAEFSRPLWVFGINS 358 (548)
Q Consensus 282 ~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g---~~~~l~~~~~d~~~p~w~~~~~~ 358 (548)
++++ ..+.... .....+.|+|||+.+|++|. +...|++++++++ +.+.+.. ...|. .
T Consensus 174 -~~~~---~~~~~~~----~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~----~~gP~------g 233 (322)
T 2fp8_A 174 -TKET---TLLLKEL----HVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVK----IPNPG------N 233 (322)
T ss_dssp -TTEE---EEEEEEE----SCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEE----CSSEE------E
T ss_pred -CCEE---EEeccCC----ccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEe----CCCCC------C
Confidence 3432 2221111 22345789999995556554 2346888888653 2222221 00121 1
Q ss_pred eeeeeecCCCCEEEEEEEe--------CCeEEEEEEECCCCceEeecCCC----ceeEeeeecCCEEEEEEecCCCCCeE
Q 008927 359 YEIIQSHGEKNLIACSYRQ--------NGRSYLGILDDFGHSLSLLDIPF----TDIDNITLGNDCLFVEGASGVEPSSV 426 (548)
Q Consensus 359 ~~~~~~~~d~~~l~~~~~~--------~g~~~L~~~dl~~g~~~~l~~~~----~~~~~~s~d~~~l~~~~ss~~~p~~l 426 (548)
+... +++ .|++.... .....|+++|.++..++.+..+. .....+..++++||+... ....|
T Consensus 234 i~~d---~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~---~~~~i 306 (322)
T 2fp8_A 234 IKRN---ADG-HFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL---FHGSV 306 (322)
T ss_dssp EEEC---TTS-CEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS---SCSEE
T ss_pred eEEC---CCC-CEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec---CCCce
Confidence 3332 144 46555433 22467899998644455555432 223333345677776543 23577
Q ss_pred EEEEcCC
Q 008927 427 AKVTLDD 433 (548)
Q Consensus 427 ~~~d~~~ 433 (548)
.+++++.
T Consensus 307 ~~~~~~~ 313 (322)
T 2fp8_A 307 GILVYDK 313 (322)
T ss_dssp EEEEC--
T ss_pred EEEeccc
Confidence 7887653
No 252
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=97.69 E-value=3.9e-05 Score=79.53 Aligned_cols=57 Identities=16% Similarity=0.237 Sum_probs=46.0
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChh
Q 008927 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSV 541 (548)
Q Consensus 474 ~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~ 541 (548)
.+++++|.|.+ .++.|+||++||++.. .+....+.|+++||.|+.+||||..+....
T Consensus 144 ~l~~~l~~P~~-------~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~~~~ 200 (422)
T 3k2i_A 144 RVRATLFLPPG-------PGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDLPNN 200 (422)
T ss_dssp TEEEEEEECSS-------SCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTSCSS
T ss_pred cEEEEEEcCCC-------CCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCCCCC
Confidence 58999999964 2467999999999754 244568999999999999999998765543
No 253
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=97.66 E-value=4.3e-05 Score=79.84 Aligned_cols=57 Identities=16% Similarity=0.290 Sum_probs=46.0
Q ss_pred EEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChh
Q 008927 474 KAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSV 541 (548)
Q Consensus 474 ~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~ 541 (548)
.+++++|.|.+ .++.|+||++||+... .+....+.|+++||+|+.+||||..+.+..
T Consensus 160 ~l~~~l~~P~~-------~~~~P~Vv~lhG~~~~----~~~~~a~~La~~Gy~Vla~D~rG~~~~~~~ 216 (446)
T 3hlk_A 160 RVRGTLFLPPE-------PGPFPGIVDMFGTGGG----LLEYRASLLAGKGFAVMALAYYNYEDLPKT 216 (446)
T ss_dssp TEEEEEEECSS-------SCCBCEEEEECCSSCS----CCCHHHHHHHTTTCEEEEECCSSSTTSCSC
T ss_pred eEEEEEEeCCC-------CCCCCEEEEECCCCcc----hhhHHHHHHHhCCCEEEEeccCCCCCCCcc
Confidence 59999999954 2467999999999754 234558999999999999999998776544
No 254
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=97.66 E-value=7.9e-05 Score=75.00 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=50.9
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCC----------CCCCCCCCcEEEEEccCccccccC---ccChHHHHHH-hcCcEE
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIY----------QASPEEKPPLLVKSHGGPTSEARG---ILNLSIQYWT-SRGWAF 527 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~----------~~~~~~~~Pliv~iHGGP~~~~~~---~~~~~~Q~~a-srGyaV 527 (548)
+.+.+.+. + .+...+|.|++... .+..+++.|+||++|||....... .|....+.|+ ++||+|
T Consensus 73 ~dv~~~~~-~--~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~v 149 (351)
T 2zsh_A 73 FDVLIDRR-I--NLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVV 149 (351)
T ss_dssp EEEEEETT-T--TEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEE
T ss_pred EEEEecCC-C--CeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEE
Confidence 44555543 3 47888888865210 000135789999999998643222 2556678888 789999
Q ss_pred EEeCCCCCCCCC
Q 008927 528 VDVNYGGSTGLS 539 (548)
Q Consensus 528 l~~NyRGStGyG 539 (548)
+.+||||+..+.
T Consensus 150 v~~d~rg~~~~~ 161 (351)
T 2zsh_A 150 VSVNYRRAPENP 161 (351)
T ss_dssp EEECCCCTTTSC
T ss_pred EEecCCCCCCCC
Confidence 999999987754
No 255
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.65 E-value=0.01 Score=64.32 Aligned_cols=234 Identities=13% Similarity=0.071 Sum_probs=125.6
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.|+|.+ ...|.++++++...+...+.... .....+.++++++.|++. +.. ...|+++++++... .
T Consensus 11 ~~~~~~--~~~I~~i~~~~~~~~~~~~~~~~----~~~~~ld~~~~~~~ly~s-D~~-------~~~I~r~~~~g~~~-~ 75 (619)
T 3s94_A 11 LLLYAN--RRDLRLVDATNGKENATIVVGGL----EDAAAVDFVFSHGLIYWS-DVS-------EEAIKRTEFNKTES-V 75 (619)
T ss_dssp CEEEEC--SSBEEEECCC---------CBCC----SCEEEEEEETTTTEEEEE-ETT-------TTEEEEEEC------C
T ss_pred eEEEec--cccEEEEeCCCCcceEEEEEcCC----CceEEEEEEeCCCEEEEE-ECC-------CCeEEEEEccCCCc-e
Confidence 477776 56799999986200223232221 123456789888887664 332 24799999987630 0
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEE
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELF 315 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~ 315 (548)
...+..+-..-...++++.++.|+|... ....|.+++++ |.. ...++...- .....++..|.+..+
T Consensus 76 ~~v~~~~~~~P~GlAvD~~~~~ly~~d~-------~~~~I~v~~~d--G~~-~~~l~~~~l----~~P~~Iavdp~~g~l 141 (619)
T 3s94_A 76 QNVVVSGLLSPDGLACDWLGEKLYWTDS-------ETNRIEVSNLD--GSL-RKVLFWQEL----DQPRAIALDPSSGFM 141 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEET-------TTTEEEEEETT--SCS-CEEEECSSC----SCCCCEEEETTTTEE
T ss_pred EEEEeCCCCCcCeEEEEecCCEEEEEeC-------CCCEEEEEECC--CCC-EEEEEeCCC----CCCceEEEecCCCeE
Confidence 2233333233455678888888877642 24689999986 331 123332222 345667888875544
Q ss_pred EEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEe
Q 008927 316 FVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSL 395 (548)
Q Consensus 316 ~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~ 395 (548)
|.+|- .....|++.++++...+.+... .+..| . .+++.+ ++++||+.- .+...|+++|+++...+.
T Consensus 142 y~tD~-g~~~~I~r~~~dG~~~~~l~~~--~~~~P---~---Glald~---~~~~LY~aD--~~~~~I~~~~~dG~~~~~ 207 (619)
T 3s94_A 142 YWTDW-GEVPKIERAGMDGSSRFIIINS--EIYWP---N---GLTLDY---EEQKLYWAD--AKLNFIHKSNLDGTNRQA 207 (619)
T ss_dssp EEEEC-SSSCEEEEEETTSCSCEEEECS--SCSSE---E---EEEEET---TTTEEEEEE--TTTCCEEEESSSCCEEC-
T ss_pred EEecc-CCCCEEEEEECCCCceEEEEeC--CCCCC---c---EEEEEc---cCCEEEEEe--CCCCeEEEecCCCCccEE
Confidence 45554 2235799999876655555421 12222 1 234432 578888763 345679999997765554
Q ss_pred ecC-CCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 396 LDI-PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 396 l~~-~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
+.. ....-.+++.+++.+|++- .....|+++|..+++
T Consensus 208 ~~~~~~~~P~gi~~~~~~ly~td---~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 208 VVKGSLPHPFALTLFEDILYWTD---WSTHSILACNKYTGE 245 (619)
T ss_dssp --------CCCEEESSSEEEEEC---TTTCSEEEEESSSCC
T ss_pred EEeCCCCCceEEEEeCCEEEEec---CCCCEEEEEECCCCc
Confidence 432 1111123455666665542 234678888876664
No 256
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.0021 Score=71.61 Aligned_cols=205 Identities=9% Similarity=0.048 Sum_probs=114.5
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEE--CCEEEEEeCCCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF--GDTVIFSNYKDQ 165 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~--~~~i~F~~~~~~ 165 (548)
..+..+.++| |+.++-.. .+|...||............+.... ..+. .-.|+++ +..|+ +...++
T Consensus 10 ~~V~~l~~s~dg~~latg~----~dg~I~vwd~~~~~~~~~~~l~~h~----~~V~---~l~~s~~~~~~~l~-s~s~Dg 77 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETHKLIDTLTGHE----GPVW---RVDWAHPKFGTILA-SCSYDG 77 (753)
T ss_dssp CCEEEECCCSSSCCEEEEE----TTTEEEEEEEETTEEEEEEEECCCS----SCEE---EEEECCTTSCSEEE-EEETTS
T ss_pred ceeEEEEECCCCCeEEEEE----CCCcEEEEecCCCCCccceeccCCc----CceE---EEEecCCCCCCEEE-EEeCCC
Confidence 4567778888 77665443 2577777866422100111222111 1111 1245555 44444 444677
Q ss_pred eEEEEeCCCCCCCc---eecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee
Q 008927 166 RLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV 240 (548)
Q Consensus 166 ~Ly~~~~~~~~~~~---~~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~ 240 (548)
.|++.++.+ +.. ..+... ...+....|+|+ |+.++....+ ..|.++|+.++.......+.
T Consensus 78 ~I~vwd~~~--~~~~~~~~~~~h----~~~V~~v~~sp~~~~~~l~sgs~d---------g~I~vwdl~~~~~~~~~~~~ 142 (753)
T 3jro_A 78 KVLIWKEEN--GRWSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSD---------GKVSVVEFKENGTTSPIIID 142 (753)
T ss_dssp CEEEEEEET--TEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT---------SEEEEEECCSSSCCCCEEEE
T ss_pred eEEEEECCC--CcccccccccCC----CCCeEEEEECCCCCCCEEEEEeCC---------CcEEEEEeecCCCcceeEee
Confidence 777777765 432 223222 234667889999 8887765433 36888898877311133344
Q ss_pred ecCCceeeeEECC-------------CCCEEEEEEecCCCCCCCCceEEEEEecCCCce-eeeEEEcCCCCCcccCCcCc
Q 008927 241 SGSDFYAFPRMDP-------------RGERMAWIEWHHPNMPWDKAELWVGYISENGDV-YKRVCVAGFDPTIVESPTEP 306 (548)
Q Consensus 241 ~~~~~~~~p~~SP-------------DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~-~~~~~l~~~~~~~~~~~~~~ 306 (548)
..........|+| ||+.|+.... ...|.+.|+..+... .....+.+.. ..+..+
T Consensus 143 ~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~--------dg~I~iwd~~~~~~~~~~~~~~~~h~----~~V~~l 210 (753)
T 3jro_A 143 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA--------DNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDV 210 (753)
T ss_dssp CCSSCEEEEEECCCC---------CGGGCCEEEEET--------TSCEEEEEEETTTTEEEEEEEECCCS----SCEEEE
T ss_pred cCCCceEEEEecCcccccccccccCCCCCEEEEEEC--------CCeEEEEeccCCcccceeeeeecCCC----CcEEEE
Confidence 4444567778999 5887775442 345888888743221 1122333333 467889
Q ss_pred eECcC---CcEEEEEeCCCCeeeEEEEeccCC
Q 008927 307 KWSSK---GELFFVTDRKNGFWNLHKWIESNN 335 (548)
Q Consensus 307 ~wspD---G~L~~~sd~~~g~~~Ly~~d~~~g 335 (548)
.|+|| |++++.... +|. |..+|+.++
T Consensus 211 ~~sp~~~~~~~l~s~s~-Dg~--I~iwd~~~~ 239 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQ-DRT--CIIWTQDNE 239 (753)
T ss_dssp EECCCCSSSEEEEEEES-SSC--EEEEEESSS
T ss_pred EeccCCCCCCEEEEEec-CCE--EEEecCCCC
Confidence 99999 776555554 454 555555554
No 257
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=97.63 E-value=8.5e-05 Score=75.67 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=52.1
Q ss_pred CeEEEeeccCC--C--eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccc-cCccC-----hHHHHHH-hcCcEEEE
Q 008927 461 PELIEFPTEVP--G--QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGILN-----LSIQYWT-SRGWAFVD 529 (548)
Q Consensus 461 pe~i~~~s~~d--G--~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~-~~~~~-----~~~Q~~a-srGyaVl~ 529 (548)
...|.|.+. | | ..+.|+|+.|.++ .++.|+|++.||.+.... .+.+. ...+.|+ ++||+|+.
T Consensus 43 ~~~i~Y~s~-d~~G~~~~~~g~l~~P~~~------~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~ 115 (377)
T 4ezi_A 43 LYKINYKTQ-SPDGNLTIASGLVAMPIHP------VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVM 115 (377)
T ss_dssp EEEEEEEEE-CTTSCEEEEEEEEEEESSC------SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEE
T ss_pred EEEEEEEEE-CCCCCEEEEEEEEEECCCC------CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEE
Confidence 356788876 5 5 4589999999752 246899999999984211 11111 2456788 99999999
Q ss_pred eCCCCCCCCC
Q 008927 530 VNYGGSTGLS 539 (548)
Q Consensus 530 ~NyRGStGyG 539 (548)
+||||..+-+
T Consensus 116 ~D~rG~G~s~ 125 (377)
T 4ezi_A 116 PDYLGLGDNE 125 (377)
T ss_dssp ECCTTSTTCC
T ss_pred eCCCCCCCCC
Confidence 9999987655
No 258
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.63 E-value=0.0019 Score=63.91 Aligned_cols=105 Identities=11% Similarity=0.034 Sum_probs=59.3
Q ss_pred CCccCceEEcC-C--CcEEEEEecCCCCCceEEEEcCCCCCCCC-cccCCCCCCccccceeeCCeeeEEECCEEEEEeCC
Q 008927 88 SKRLGGTAVDG-H--GRLIWLESRPTEAGRGVLVKEPAKAGDEP-SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYK 163 (548)
Q Consensus 88 ~~~~~~~~~sp-g--~~i~~~~~~~~e~gr~~l~~~~~~~~~~~-~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~ 163 (548)
...+..+.++| + +..+..... +|...||.....+ ... +.+......+. .-.|+++++.|+- ...
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~---dg~i~iw~~~~~~-~~~~~~~~~h~~~v~-------~~~~~~~~~~l~s-~~~ 106 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSW---ANDVRCWEVQDSG-QTIPKAQQMHTGPVL-------DVCWSDDGSKVFT-ASC 106 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEET---TSEEEEEEECTTS-CEEEEEEEECSSCEE-------EEEECTTSSEEEE-EET
T ss_pred CCceEEEEEcCCCCCceEEEEECC---CCcEEEEEcCCCC-ceeEEEeccccCCEE-------EEEECcCCCEEEE-EcC
Confidence 35678889998 4 465555433 5777788775421 111 12221111111 1256666666654 446
Q ss_pred CCeEEEEeCCCCCCCceecCCCCCCCCceecceee--CCCCCEEEEEEe
Q 008927 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF--DPRFNRYVTVRE 210 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~--SpDG~~i~~v~~ 210 (548)
++.|.+.++.. ++...+... ...+..+.| +|+++.|+....
T Consensus 107 dg~v~iwd~~~--~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~ 149 (368)
T 3mmy_A 107 DKTAKMWDLSS--NQAIQIAQH----DAPVKTIHWIKAPNYSCVMTGSW 149 (368)
T ss_dssp TSEEEEEETTT--TEEEEEEEC----SSCEEEEEEEECSSCEEEEEEET
T ss_pred CCcEEEEEcCC--CCceeeccc----cCceEEEEEEeCCCCCEEEEccC
Confidence 77888889876 555444332 234556677 899887766543
No 259
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.004 Score=70.90 Aligned_cols=203 Identities=10% Similarity=-0.002 Sum_probs=114.4
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|+|++..|+-.. .++.|++.+..+ .+....... ...+..+.|+| |+.|+....+ ..|.++|+
T Consensus 24 afspdg~~lAsgs-~Dg~I~lw~~~~--~~~~~~~~~----~~~V~~l~fsp-g~~L~S~s~D---------~~v~lWd~ 86 (902)
T 2oaj_A 24 AFDFTQNLLAIAT-VTGEVHIYGQQQ--VEVVIKLED----RSAIKEMRFVK-GIYLVVINAK---------DTVYVLSL 86 (902)
T ss_dssp EEETTTTEEEEEE-TTSEEEEECSTT--CEEEEECSS----CCCEEEEEEET-TTEEEEEETT---------CEEEEEET
T ss_pred EECCCCCEEEEEe-CCCEEEEEeCCC--cEEEEEcCC----CCCEEEEEEcC-CCEEEEEECc---------CeEEEEEC
Confidence 5777777666544 567888888765 333222222 23466778999 8866665433 46888899
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE---------EcCCCCCc
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC---------VAGFDPTI 299 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~---------l~~~~~~~ 299 (548)
.+++ ........+.+....|+|||++|+-.. . ...|.+.|++. +.....+. +.+..
T Consensus 87 ~~~~---~~~~~~~~~~V~~v~~sp~g~~l~sgs-~-------dg~V~lwd~~~-~~~~~~~i~~~~~~~~~~~~h~--- 151 (902)
T 2oaj_A 87 YSQK---VLTTVFVPGKITSIDTDASLDWMLIGL-Q-------NGSMIVYDIDR-DQLSSFKLDNLQKSSFFPAARL--- 151 (902)
T ss_dssp TTCS---EEEEEECSSCEEEEECCTTCSEEEEEE-T-------TSCEEEEETTT-TEEEEEEECCHHHHHTCSSSCC---
T ss_pred CCCc---EEEEEcCCCCEEEEEECCCCCEEEEEc-C-------CCcEEEEECCC-CccccceeccccccccccccCC---
Confidence 9886 332223444567788999999987443 1 34688889874 43211111 11111
Q ss_pred ccCCcCceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCC----------cccccCcceeeeeecCCC
Q 008927 300 VESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRP----------LWVFGINSYEIIQSHGEK 368 (548)
Q Consensus 300 ~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p----------~w~~~~~~~~~~~~~~d~ 368 (548)
..+....|+|++. ++++... +| .+ ++|+.+++...........+.+ ..........|.| ++
T Consensus 152 -~~V~sl~~sp~~~~~l~~g~~-dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp---dg 223 (902)
T 2oaj_A 152 -SPIVSIQWNPRDIGTVLISYE-YV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP---NS 223 (902)
T ss_dssp -CCCCEEEEETTEEEEEEEECS-SC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT---TS
T ss_pred -CCeEEEEEccCCCCEEEEEeC-CC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC---CC
Confidence 4577899999764 5555544 44 46 7788777654322111000000 0000122355664 66
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 369 NLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 369 ~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
+.| ++...++. |.+.|+.+++..
T Consensus 224 ~~l-asgs~Dg~--i~lWd~~~g~~~ 246 (902)
T 2oaj_A 224 LHI-ITIHEDNS--LVFWDANSGHMI 246 (902)
T ss_dssp SEE-EEEETTCC--EEEEETTTCCEE
T ss_pred CEE-EEEECCCe--EEEEECCCCcEE
Confidence 554 45555664 556688777653
No 260
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=97.61 E-value=4.5e-05 Score=73.95 Aligned_cols=66 Identities=18% Similarity=0.172 Sum_probs=52.9
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCCh
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSS 540 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~ 540 (548)
.+.+++++ ||.+++++++.|. +.|+||++||++... ..|....+.|+.+||.|+.+|+||......
T Consensus 6 ~~~~~~~~--~g~~l~~~~~~p~----------~~p~vv~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~ 71 (290)
T 3ksr_A 6 LSSIEIPV--GQDELSGTLLTPT----------GMPGVLFVHGWGGSQ--HHSLVRAREAVGLGCICMTFDLRGHEGYAS 71 (290)
T ss_dssp EEEEEEEE--TTEEEEEEEEEEE----------SEEEEEEECCTTCCT--TTTHHHHHHHHTTTCEEECCCCTTSGGGGG
T ss_pred eeeEEecC--CCeEEEEEEecCC----------CCcEEEEeCCCCCCc--CcHHHHHHHHHHCCCEEEEeecCCCCCCCC
Confidence 46677877 7899999999983 459999999998643 345667789999999999999998765443
No 261
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.61 E-value=0.02 Score=56.65 Aligned_cols=195 Identities=14% Similarity=0.077 Sum_probs=102.3
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCC
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~ 271 (548)
.+....|+||++.|+....+ ..|.++|+.+++. ...+....+.+....|||||++|+-...
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D---------~~v~lwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~l~s~~~-------- 138 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWD---------KTLRLWDLRTGTT--YKRFVGHQSEVYSVAFSPDNRQILSAGA-------- 138 (343)
T ss_dssp CEEEEEECSSTTEEEEEETT---------SEEEEEETTSSCE--EEEEECCCSCEEEEEECSSTTEEEEEET--------
T ss_pred ceEEEEECCCCCEEEEEcCC---------CcEEEEECCCCcE--EEEEcCCCCcEEEEEECCCCCEEEEEcC--------
Confidence 45677899999987665433 3688889998861 2344444455677899999998874441
Q ss_pred CceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC----------cEEEEEeCCCCeeeEEEEeccCCeeE-ee
Q 008927 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG----------ELFFVTDRKNGFWNLHKWIESNNEVL-AI 340 (548)
Q Consensus 272 ~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG----------~L~~~sd~~~g~~~Ly~~d~~~g~~~-~l 340 (548)
...|.+.++.. .. ........ .....+....|+|++ .+++.... +|. |..+|. .++.. .+
T Consensus 139 d~~i~~wd~~~-~~---~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~~--i~iwd~-~~~~~~~~ 209 (343)
T 2xzm_R 139 EREIKLWNILG-EC---KFSSAEKE-NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW-DGR--LKVWNT-NFQIRYTF 209 (343)
T ss_dssp TSCEEEEESSS-CE---EEECCTTT-SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET-TSE--EEEEET-TTEEEEEE
T ss_pred CCEEEEEeccC-Cc---eeeeeccc-CCCceeeeeeeccccccccccCCCCCEEEEEcC-CCE--EEEEcC-CCceeEEE
Confidence 24577778762 21 11111100 000345667888887 44444444 454 555564 33322 22
Q ss_pred cccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCC-Cc-eEeecCCCceeEee--eecCCEEEEE
Q 008927 341 YSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG-HS-LSLLDIPFTDIDNI--TLGNDCLFVE 416 (548)
Q Consensus 341 ~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~-g~-~~~l~~~~~~~~~~--s~d~~~l~~~ 416 (548)
... ..+ .....|.| +++.| ++...++. |.++|+.. +. ...+... ..+..+ ++++..+ ..
T Consensus 210 ~~h----~~~-----v~~~~~s~---~g~~l-~sgs~dg~--v~iwd~~~~~~~~~~~~~~-~~v~~v~~sp~~~~l-a~ 272 (343)
T 2xzm_R 210 KAH----ESN-----VNHLSISP---NGKYI-ATGGKDKK--LLIWDILNLTYPQREFDAG-STINQIAFNPKLQWV-AV 272 (343)
T ss_dssp ECC----SSC-----EEEEEECT---TSSEE-EEEETTCE--EEEEESSCCSSCSEEEECS-SCEEEEEECSSSCEE-EE
T ss_pred cCc----ccc-----ceEEEECC---CCCEE-EEEcCCCe--EEEEECCCCcccceeecCC-CcEEEEEECCCCCEE-EE
Confidence 111 111 12245654 56555 45555554 45556632 22 2222221 224433 5666543 33
Q ss_pred EecCCCCCeEEEEEcCCCc
Q 008927 417 GASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 417 ~ss~~~p~~l~~~d~~~~~ 435 (548)
+.. ..+.++++.+++
T Consensus 273 ~~d----~~v~iw~~~~~~ 287 (343)
T 2xzm_R 273 GTD----QGVKIFNLMTQS 287 (343)
T ss_dssp EES----SCEEEEESSSCC
T ss_pred ECC----CCEEEEEeCCCC
Confidence 332 347788876654
No 262
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.011 Score=56.95 Aligned_cols=236 Identities=13% Similarity=0.091 Sum_probs=125.1
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCC-CcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCe
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDE-PSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQR 166 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~-~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~ 166 (548)
..+..+.++| ++.++... .+|...+|.+....... ...+.... ..+ ....++++.|+.. ..++.
T Consensus 60 ~~v~~~~~~~~~~~l~~~~----~dg~i~~~~~~~~~~~~~~~~~~~~~----~~i-----~~~~~~~~~l~~~-~~d~~ 125 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGG----KDTMINGVPLFATSGEDPLYTLIGHQ----GNV-----CSLSFQDGVVISG-SWDKT 125 (313)
T ss_dssp SCEEEEEEETTTTEEEEEE----TTSCEEEEETTCCTTSCC-CEECCCS----SCE-----EEEEEETTEEEEE-ETTSE
T ss_pred ccEEEEEECCCCCEEEEec----CCCeEEEEEeeecCCCCcccchhhcc----cCE-----EEEEecCCEEEEE-eCCCC
Confidence 4567788998 55554433 25777778765431111 11121111 111 2344566655544 45677
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCceecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee-cCC
Q 008927 167 LYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GSD 244 (548)
Q Consensus 167 Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~-~~~ 244 (548)
|.+.+ .+ .....+... ........|+| +++.|+....+ ..|.++|.... ...+.. ...
T Consensus 126 i~~~d-~~--~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~----~~~~~~~~~~ 185 (313)
T 3odt_A 126 AKVWK-EG--SLVYNLQAH----NASVWDAKVVSFSENKFLTASAD---------KTIKLWQNDKV----IKTFSGIHND 185 (313)
T ss_dssp EEEEE-TT--EEEEEEECC----SSCEEEEEEEETTTTEEEEEETT---------SCEEEEETTEE----EEEECSSCSS
T ss_pred EEEEc-CC--cEEEecccC----CCceeEEEEccCCCCEEEEEECC---------CCEEEEecCce----EEEEeccCcc
Confidence 77777 22 223334332 12344556766 88887665433 24667773222 233332 344
Q ss_pred ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCe
Q 008927 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGF 324 (548)
Q Consensus 245 ~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~ 324 (548)
......|+|+|+ |+... ....|++.++.. ++ ....+.... ..+....|+|||+|+..+ . +|
T Consensus 186 ~i~~~~~~~~~~-~~~~~--------~dg~i~i~d~~~-~~--~~~~~~~~~----~~i~~~~~~~~~~l~~~~-~-dg- 246 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCS--------NDGLIKLVDMHT-GD--VLRTYEGHE----SFVYCIKLLPNGDIVSCG-E-DR- 246 (313)
T ss_dssp CEEEEEEEETTE-EEEEE--------TTSEEEEEETTT-CC--EEEEEECCS----SCEEEEEECTTSCEEEEE-T-TS-
T ss_pred cEEEEEEcCCCe-EEEcc--------CCCeEEEEECCc-hh--hhhhhhcCC----ceEEEEEEecCCCEEEEe-c-CC-
Confidence 567788999998 55333 135799999974 43 233344333 457788999999644333 2 33
Q ss_pred eeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCce
Q 008927 325 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSL 393 (548)
Q Consensus 325 ~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~ 393 (548)
.|+.+|+.+++........ ..+. ....+.| +++ ++ +...++ .|+++|+.+++.
T Consensus 247 -~v~iwd~~~~~~~~~~~~~---~~~i-----~~~~~~~---~~~-~~-~~~~dg--~i~iw~~~~~~~ 299 (313)
T 3odt_A 247 -TVRIWSKENGSLKQVITLP---AISI-----WSVDCMS---NGD-II-VGSSDN--LVRIFSQEKSRW 299 (313)
T ss_dssp -EEEEECTTTCCEEEEEECS---SSCE-----EEEEECT---TSC-EE-EEETTS--CEEEEESCGGGC
T ss_pred -EEEEEECCCCceeEEEecc---CceE-----EEEEEcc---CCC-EE-EEeCCC--cEEEEeCCCCce
Confidence 5777888777654433211 1111 1244553 554 43 344455 455667666543
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.60 E-value=0.0046 Score=60.57 Aligned_cols=203 Identities=10% Similarity=0.036 Sum_probs=103.4
Q ss_pred CccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCC--Ce
Q 008927 89 KRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKD--QR 166 (548)
Q Consensus 89 ~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~--~~ 166 (548)
.....+.++|.+++||.... .+ .|++++.+ +....+.... ... .+-++.++| .|++.+... .+
T Consensus 32 ~~pegia~~~~g~lyv~d~~---~~--~I~~~d~~--g~~~~~~~~~----~~p---~gia~~~dG-~l~vad~~~~~~~ 96 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE---VG--EIVSITPD--GNQQIHATVE----GKV---SGLAFTSNG-DLVATGWNADSIP 96 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT---TT--EEEEECTT--CCEEEEEECS----SEE---EEEEECTTS-CEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCC---CC--eEEEECCC--CceEEEEeCC----CCc---eeEEEcCCC-cEEEEeccCCcce
Confidence 34567899884458777632 23 47777665 2332222111 011 011233334 466655332 36
Q ss_pred EEEEeCCCCCCCceecCCCCCCCCceec-ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee-----
Q 008927 167 LYKHSIDSKDSSPLPITPDYGEPLVSYA-DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV----- 240 (548)
Q Consensus 167 Ly~~~~~~~~~~~~~lT~~~~~~~~~~~-~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~----- 240 (548)
|++++... ++.+.+.... ..++. .....+++ .+ |+.+.. ...||++|..+++ .++..
T Consensus 97 v~~~d~~~--g~~~~~~~~~---~~~~~~g~~~~~~~-~~-~v~d~~-------~g~i~~~d~~~~~---~~v~~~~~~~ 159 (306)
T 2p4o_A 97 VVSLVKSD--GTVETLLTLP---DAIFLNGITPLSDT-QY-LTADSY-------RGAIWLIDVVQPS---GSIWLEHPML 159 (306)
T ss_dssp EEEEECTT--SCEEEEEECT---TCSCEEEEEESSSS-EE-EEEETT-------TTEEEEEETTTTE---EEEEEECGGG
T ss_pred EEEEcCCC--CeEEEEEeCC---CccccCcccccCCC-cE-EEEECC-------CCeEEEEeCCCCc---EeEEEECCcc
Confidence 99988765 5665553321 12222 23334444 43 433321 2489999988763 22210
Q ss_pred ---e-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEE
Q 008927 241 ---S-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFF 316 (548)
Q Consensus 241 ---~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~ 316 (548)
. ...+...-.++|||++|++.. . ....|++++++.+|++.....+... .....+..++||+| |
T Consensus 160 ~~~~~~~~~~~pngis~dg~~lyv~d-~------~~~~I~~~~~~~~g~~~~~~~~~~~-----~~P~gi~vd~dG~l-~ 226 (306)
T 2p4o_A 160 ARSNSESVFPAANGLKRFGNFLYVSN-T------EKMLLLRIPVDSTDKPGEPEIFVEQ-----TNIDDFAFDVEGNL-Y 226 (306)
T ss_dssp SCSSTTCCSCSEEEEEEETTEEEEEE-T------TTTEEEEEEBCTTSCBCCCEEEEES-----CCCSSEEEBTTCCE-E
T ss_pred ccccccCCCCcCCCcCcCCCEEEEEe-C------CCCEEEEEEeCCCCCCCccEEEecc-----CCCCCeEECCCCCE-E
Confidence 0 011111112489999876443 2 2468999999743543333333221 12355788999986 5
Q ss_pred EEeCCCCeeeEEEEeccCCeeEe
Q 008927 317 VTDRKNGFWNLHKWIESNNEVLA 339 (548)
Q Consensus 317 ~sd~~~g~~~Ly~~d~~~g~~~~ 339 (548)
+++. +...|++++++ |+...
T Consensus 227 va~~--~~~~V~~~~~~-G~~~~ 246 (306)
T 2p4o_A 227 GATH--IYNSVVRIAPD-RSTTI 246 (306)
T ss_dssp EECB--TTCCEEEECTT-CCEEE
T ss_pred EEeC--CCCeEEEECCC-CCEEE
Confidence 5554 22468889875 55443
No 264
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.60 E-value=0.0076 Score=59.45 Aligned_cols=110 Identities=7% Similarity=-0.040 Sum_probs=71.9
Q ss_pred eeEEEC--CEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEE
Q 008927 149 AFRIFG--DTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVA 225 (548)
Q Consensus 149 ~~~~~~--~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~ 225 (548)
+|++++ +.++++...++.|.+.++...+... +.+... ...+..+.|+|||+.|+....+ ..|.+
T Consensus 46 ~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~~d---------g~v~i 112 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH----TGPVLDVCWSDDGSKVFTASCD---------KTAKM 112 (368)
T ss_dssp EECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC----SSCEEEEEECTTSSEEEEEETT---------SEEEE
T ss_pred EEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc----cCCEEEEEECcCCCEEEEEcCC---------CcEEE
Confidence 566664 4555665567777777766410222 233322 2346678899999988765433 36888
Q ss_pred EECCCCCccCcEEeeecCCceeeeEE--CCCCCEEEEEEecCCCCCCCCceEEEEEecC
Q 008927 226 IALNGQNIQEPKVLVSGSDFYAFPRM--DPRGERMAWIEWHHPNMPWDKAELWVGYISE 282 (548)
Q Consensus 226 idl~~g~~~~~~~L~~~~~~~~~p~~--SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~ 282 (548)
+|+.+++ ...+......+....| +|||+.|+.... ...|++.|+..
T Consensus 113 wd~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--------dg~i~vwd~~~ 160 (368)
T 3mmy_A 113 WDLSSNQ---AIQIAQHDAPVKTIHWIKAPNYSCVMTGSW--------DKTLKFWDTRS 160 (368)
T ss_dssp EETTTTE---EEEEEECSSCEEEEEEEECSSCEEEEEEET--------TSEEEEECSSC
T ss_pred EEcCCCC---ceeeccccCceEEEEEEeCCCCCEEEEccC--------CCcEEEEECCC
Confidence 9999987 5556555555677788 999998875441 35689999874
No 265
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.60 E-value=0.0022 Score=61.16 Aligned_cols=156 Identities=10% Similarity=-0.070 Sum_probs=92.2
Q ss_pred EEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 151 RIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 151 ~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
..+++.||.+...+++|.++|+++ ++. +.+ -. ...++. ...++|++|+.+ ... .+.++++|++
T Consensus 61 ~~~~~~Ly~stG~~g~v~~iD~~T--gkv~~~~-l~----~~~Fge-Git~~g~~Ly~l-tw~-------~~~v~V~D~~ 124 (268)
T 3nok_A 61 VFHQGHFFESTGHQGTLRQLSLES--AQPVWME-RL----GNIFAE-GLASDGERLYQL-TWT-------EGLLFTWSGM 124 (268)
T ss_dssp EEETTEEEEEETTTTEEEECCSSC--SSCSEEE-EC----TTCCEE-EEEECSSCEEEE-ESS-------SCEEEEEETT
T ss_pred EEECCEEEEEcCCCCEEEEEECCC--CcEEeEE-CC----CCccee-EEEEeCCEEEEE-Ecc-------CCEEEEEECC
Confidence 346789999887788899999987 443 444 21 111222 245677777554 322 2589999999
Q ss_pred CCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceEC
Q 008927 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (548)
Q Consensus 230 ~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ws 309 (548)
+.+. ...+.-... ...+++||++|+ ++ +. ..+|+++|.++ .++.....+.... ........+.|.
T Consensus 125 Tl~~--~~ti~~~~e---GwGLt~Dg~~L~-vS-dG------s~~l~~iDp~T-~~v~~~I~V~~~g-~~v~~lNeLe~~ 189 (268)
T 3nok_A 125 PPQR--ERTTRYSGE---GWGLCYWNGKLV-RS-DG------GTMLTFHEPDG-FALVGAVQVKLRG-QPVELINELECA 189 (268)
T ss_dssp TTEE--EEEEECSSC---CCCEEEETTEEE-EE-CS------SSEEEEECTTT-CCEEEEEECEETT-EECCCEEEEEEE
T ss_pred cCcE--EEEEeCCCc---eeEEecCCCEEE-EE-CC------CCEEEEEcCCC-CeEEEEEEeCCCC-cccccccccEEe
Confidence 9862 233332221 124567899774 65 22 46899999874 4432222232221 100123456776
Q ss_pred cCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 310 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 310 pDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
||+||..... . ..|.++|+++|++....
T Consensus 190 -dG~lyanvw~-s--~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 190 -NGVIYANIWH-S--SDVLEIDPATGTVVGVI 217 (268)
T ss_dssp -TTEEEEEETT-C--SEEEEECTTTCBEEEEE
T ss_pred -CCEEEEEECC-C--CeEEEEeCCCCcEEEEE
Confidence 8877644433 2 37999999999876443
No 266
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.60 E-value=0.012 Score=56.03 Aligned_cols=193 Identities=11% Similarity=0.083 Sum_probs=105.0
Q ss_pred ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCce
Q 008927 195 DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAE 274 (548)
Q Consensus 195 ~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~ 274 (548)
.+.++ |+ . +|++.... ..+.|.++|+++|+. .+.+.-+.. +..-.+.++|++|..+.| ....
T Consensus 47 GL~~~-~~-~-LyestG~~-----g~S~v~~vD~~Tgkv--~~~~~l~~~-~FgeGit~~g~~ly~ltw-------~~~~ 108 (262)
T 3nol_A 47 GFFYR-NG-Y-FYESTGLN-----GRSSIRKVDIESGKT--LQQIELGKR-YFGEGISDWKDKIVGLTW-------KNGL 108 (262)
T ss_dssp EEEEE-TT-E-EEEEEEET-----TEEEEEEECTTTCCE--EEEEECCTT-CCEEEEEEETTEEEEEES-------SSSE
T ss_pred eEEEE-CC-E-EEEECCCC-----CCceEEEEECCCCcE--EEEEecCCc-cceeEEEEeCCEEEEEEe-------eCCE
Confidence 45566 54 4 45443321 246899999999982 233332222 222246668888865554 4578
Q ss_pred EEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccc
Q 008927 275 LWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVF 354 (548)
Q Consensus 275 L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~ 354 (548)
++++|.++ .++ ...+.-.. .....++||+.+|++|. + ..|+.+|+++.++..-.+.. +.+.|. .
T Consensus 109 v~v~D~~t-~~~--~~ti~~~~-------eG~glt~dg~~L~~SdG-s--~~i~~iDp~T~~v~~~I~V~-~~g~~~--~ 172 (262)
T 3nol_A 109 GFVWNIRN-LRQ--VRSFNYDG-------EGWGLTHNDQYLIMSDG-T--PVLRFLDPESLTPVRTITVT-AHGEEL--P 172 (262)
T ss_dssp EEEEETTT-CCE--EEEEECSS-------CCCCEEECSSCEEECCS-S--SEEEEECTTTCSEEEEEECE-ETTEEC--C
T ss_pred EEEEECcc-CcE--EEEEECCC-------CceEEecCCCEEEEECC-C--CeEEEEcCCCCeEEEEEEec-cCCccc--c
Confidence 99999874 442 22332211 11234578886666664 3 47999999887754221110 000110 0
Q ss_pred cCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCC------------CceeEee--eecCCEEEEEEec
Q 008927 355 GINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIP------------FTDIDNI--TLGNDCLFVEGAS 419 (548)
Q Consensus 355 ~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~------------~~~~~~~--s~d~~~l~~~~ss 419 (548)
..+.+.+. + ++|+... -....|+++|+++|++. .+... .....++ +++++++++++-
T Consensus 173 ~lNELe~~----~-G~lyan~--w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK- 244 (262)
T 3nol_A 173 ELNELEWV----D-GEIFANV--WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK- 244 (262)
T ss_dssp CEEEEEEE----T-TEEEEEE--TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET-
T ss_pred ccceeEEE----C-CEEEEEE--ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC-
Confidence 11123343 3 4666433 23347999999999875 34321 1123444 566777777663
Q ss_pred CCCCCeEEEEEc
Q 008927 420 GVEPSSVAKVTL 431 (548)
Q Consensus 420 ~~~p~~l~~~d~ 431 (548)
.-+.+|.+.+
T Consensus 245 --~Wp~~~ev~~ 254 (262)
T 3nol_A 245 --LWPKVFEITL 254 (262)
T ss_dssp --TCSEEEEEEE
T ss_pred --CCCceEEEEE
Confidence 3467777654
No 267
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.58 E-value=0.0047 Score=58.91 Aligned_cols=155 Identities=10% Similarity=0.029 Sum_probs=88.3
Q ss_pred ECCEEEEEeCCC--CeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 153 FGDTVIFSNYKD--QRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 153 ~~~~i~F~~~~~--~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
+++.||.+.... ..|.++|+++ ++.. .+.-. ...++. ...++|++|+.+ ... .+.++++|++
T Consensus 51 ~~~~LyestG~~g~S~v~~vD~~T--gkv~~~~~l~----~~~Fge-Git~~g~~ly~l-tw~-------~~~v~v~D~~ 115 (262)
T 3nol_A 51 RNGYFYESTGLNGRSSIRKVDIES--GKTLQQIELG----KRYFGE-GISDWKDKIVGL-TWK-------NGLGFVWNIR 115 (262)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTT--CCEEEEEECC----TTCCEE-EEEEETTEEEEE-ESS-------SSEEEEEETT
T ss_pred ECCEEEEECCCCCCceEEEEECCC--CcEEEEEecC----Ccccee-EEEEeCCEEEEE-Eee-------CCEEEEEECc
Confidence 466777776443 3899999987 5543 33222 111222 245578887554 322 2589999999
Q ss_pred CCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceEC
Q 008927 230 GQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWS 309 (548)
Q Consensus 230 ~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ws 309 (548)
+.+. ...+.-+. ....+++||++|+ ++ +. ..+|+++|.++ .++.....+.... ........+.|.
T Consensus 116 t~~~--~~ti~~~~---eG~glt~dg~~L~-~S-dG------s~~i~~iDp~T-~~v~~~I~V~~~g-~~~~~lNELe~~ 180 (262)
T 3nol_A 116 NLRQ--VRSFNYDG---EGWGLTHNDQYLI-MS-DG------TPVLRFLDPES-LTPVRTITVTAHG-EELPELNELEWV 180 (262)
T ss_dssp TCCE--EEEEECSS---CCCCEEECSSCEE-EC-CS------SSEEEEECTTT-CSEEEEEECEETT-EECCCEEEEEEE
T ss_pred cCcE--EEEEECCC---CceEEecCCCEEE-EE-CC------CCeEEEEcCCC-CeEEEEEEeccCC-ccccccceeEEE
Confidence 9872 23343222 1124567898774 55 21 35799999874 4432222232211 000122346786
Q ss_pred cCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 310 SKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 310 pDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
||+||..... . ..|+++|+++|++....
T Consensus 181 -~G~lyan~w~-~--~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 181 -DGEIFANVWQ-T--NKIVRIDPETGKVTGII 208 (262)
T ss_dssp -TTEEEEEETT-S--SEEEEECTTTCBEEEEE
T ss_pred -CCEEEEEEcc-C--CeEEEEECCCCcEEEEE
Confidence 8877654433 2 37999999999976543
No 268
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=97.58 E-value=7.9e-05 Score=71.03 Aligned_cols=74 Identities=15% Similarity=0.043 Sum_probs=48.2
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccCh--HHHHH-HhcCcEEEEeCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYW-TSRGWAFVDVNYGGST 536 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~--~~Q~~-asrGyaVl~~NyRGSt 536 (548)
.+.++|.+..+|.++..++|.|.+.+....+.+++|+||++||+..... .|.. ..+.+ +.+||+|+.+|+|++.
T Consensus 7 ~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 83 (263)
T 2uz0_A 7 VMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN--SWLKRTNVERLLRGTNLIVVMPNTSNGW 83 (263)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTT--HHHHHSCHHHHTTTCCCEEEECCCTTST
T ss_pred EeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH--HHHhccCHHHHHhcCCeEEEEECCCCCc
Confidence 3566777643688999999999752111112467899999999985433 2222 23444 4589999999999874
No 269
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.57 E-value=0.0044 Score=59.52 Aligned_cols=200 Identities=11% Similarity=0.072 Sum_probs=112.4
Q ss_pred CceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEEEEe
Q 008927 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (548)
Q Consensus 92 ~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~~~ 171 (548)
..+.++|.+++|..... .+.+.|..++... ++...-.+-+ .. +.+-.+++++++||.....++.++++|
T Consensus 24 ~Gl~~~~dg~Lyvstg~---~~~s~v~~iD~~t-g~v~~~i~l~----~~---~fgeGi~~~g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGL---YGRSSVRQVALQT-GKVENIHKMD----DS---YFGEGLTLLNEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECS---TTTCEEEEEETTT-CCEEEEEECC----TT---CCEEEEEEETTEEEEEETTCSEEEEEE
T ss_pred ccEEEeCCCeEEEECCC---CCCCEEEEEECCC-CCEEEEEecC----CC---cceEEEEEeCCEEEEEEecCCEEEEEE
Confidence 56778853344333322 2556677676543 3333221110 00 112246778999999998889999999
Q ss_pred CCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecC--C---c
Q 008927 172 IDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS--D---F 245 (548)
Q Consensus 172 ~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~--~---~ 245 (548)
.++ .+. ..+... . + ....+++||++++ ++. . .+.|+.+|.++.+. .+.+.-+. . +
T Consensus 93 ~~t--~~v~~~i~~g-~--~---~g~glt~Dg~~l~-vs~-g-------s~~l~viD~~t~~v--~~~I~Vg~~~~p~~~ 153 (266)
T 2iwa_A 93 RRT--LSNIKNFTHQ-M--K---DGWGLATDGKILY-GSD-G-------TSILYEIDPHTFKL--IKKHNVKYNGHRVIR 153 (266)
T ss_dssp TTT--TEEEEEEECC-S--S---SCCEEEECSSSEE-EEC-S-------SSEEEEECTTTCCE--EEEEECEETTEECCC
T ss_pred CCC--CcEEEEEECC-C--C---CeEEEEECCCEEE-EEC-C-------CCeEEEEECCCCcE--EEEEEECCCCccccc
Confidence 976 333 334322 0 1 1234778999865 443 2 25899999999762 33333221 1 1
Q ss_pred eeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCC--------CCCcccCCcCceECcCCcEEEE
Q 008927 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF--------DPTIVESPTEPKWSSKGELFFV 317 (548)
Q Consensus 246 ~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~--------~~~~~~~~~~~~wspDG~L~~~ 317 (548)
.....|. || +| |+.. |....|.++|.++ |++.....+.+. ... .......+|+|||+.+|+
T Consensus 154 ~nele~~-dg-~l-yvn~------~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~-~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 154 LNELEYI-NG-EV-WANI------WQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRD-IDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EEEEEEE-TT-EE-EEEE------TTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTT-CCCEEEEEEETTTTEEEE
T ss_pred ceeEEEE-CC-EE-EEec------CCCCeEEEEECCC-CcEEEEEECCCcccccccccccc-cCceEEEEEcCCCCEEEE
Confidence 2233456 67 44 5552 3356899999984 664332223210 000 012356789999997777
Q ss_pred EeCCCCeeeEEEEeccC
Q 008927 318 TDRKNGFWNLHKWIESN 334 (548)
Q Consensus 318 sd~~~g~~~Ly~~d~~~ 334 (548)
+.+ .+..||.+++..
T Consensus 223 Tgk--~~~~v~~i~l~~ 237 (266)
T 2iwa_A 223 TGK--LWPKLFEIKLHL 237 (266)
T ss_dssp EET--TCSEEEEEEEEE
T ss_pred ECC--CCCeEEEEEEec
Confidence 765 566788888744
No 270
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.56 E-value=0.013 Score=63.55 Aligned_cols=197 Identities=12% Similarity=0.099 Sum_probs=116.3
Q ss_pred EECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCC
Q 008927 152 IFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ 231 (548)
Q Consensus 152 ~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g 231 (548)
+.++.|||++...+.|++++++| ...+.+.... -.....+++++.++.|++. +.. ...|.++++++.
T Consensus 358 ~~~~~ly~sD~~~~~I~r~~~~g--~~~~~v~~~~---~~~p~GlAvD~~~~~lY~t-D~~-------~~~I~v~~~~G~ 424 (619)
T 3s94_A 358 PVEGYIYWTDDEVRAIRRSFIDG--SGSQFVVTAQ---IAHPDGIAVDWVARNLYWT-DTG-------TDRIEVTRLNGT 424 (619)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS--CSCEEEECSS---CSCCCEEEEETTTTEEEEE-ETT-------TTEEEEEETTSC
T ss_pred cCCCeEEEEeCCCCeEEEEEcCC--CccEEEEECC---CCCcCceEEecccCcEEEE-eCC-------CCcEEEEeCCCC
Confidence 33679999988788999999987 5555443321 1123456777777777664 321 358999999988
Q ss_pred CccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc
Q 008927 232 NIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 232 ~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp 310 (548)
. .+.|... -..-...++.|....|+|..|.. ...|+.+++++.. ...++...- .....+..++
T Consensus 425 ~---~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~------~~~I~r~~~dG~~---~~~l~~~~l----~~P~GlalD~ 488 (619)
T 3s94_A 425 M---RKILISEDLEEPRAIVLDPMVGYMYWTDWGE------IPKIERAALDGSD---RVVLVNTSL----GWPNGLALDY 488 (619)
T ss_dssp S---CEEEECTTCCSEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCS---CEEEECSSC----SCEEEEEEET
T ss_pred e---EEEEEECCCCCeeeEEEEcCCCcEEEecCCC------CCEEEEEccCCCc---cEEEEeCCC----CCCeeeEEcc
Confidence 6 6666532 22234557888767788776532 3579998887322 122333211 2344567787
Q ss_pred CCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC
Q 008927 311 KGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 389 (548)
Q Consensus 311 DG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~ 389 (548)
+++ ||+. |. +...|+++++++...+.+... ....| ++ ++. .++.||++- -+...|+++|..
T Consensus 489 ~~~~LY~a-D~--~~~~I~~~~~dG~~~~~~~~~--~l~~P---~g---lav-----~~~~ly~tD--~~~~~I~~~~k~ 550 (619)
T 3s94_A 489 DEGKIYWG-DA--KTDKIEVMNTDGTGRRVLVED--KIPHI---FG---FTL-----LGDYVYWTD--WQRRSIERVHKR 550 (619)
T ss_dssp TTTEEEEE-ET--TTTEEEEEESSSCCCEEEEEC--CCCSS---CC---EEE-----ETTEEEEEC--TTSSCEEEEESS
T ss_pred cCCEEEEE-EC--CCCEEEEEecCCCceEEEecc--CCCCc---EE---EEE-----ECCEEEEee--cCCCeEEEEEcC
Confidence 766 5554 43 334788999876655545321 12222 11 223 345666542 344567777777
Q ss_pred CCceEe
Q 008927 390 GHSLSL 395 (548)
Q Consensus 390 ~g~~~~ 395 (548)
+|..+.
T Consensus 551 ~g~~~~ 556 (619)
T 3s94_A 551 SAEREV 556 (619)
T ss_dssp SCCEEE
T ss_pred CCceEE
Confidence 664433
No 271
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=97.56 E-value=0.00025 Score=68.14 Aligned_cols=73 Identities=19% Similarity=0.152 Sum_probs=52.2
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-----cChHHHHHHhc----CcEEEEe
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-----LNLSIQYWTSR----GWAFVDV 530 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-----~~~~~Q~~asr----GyaVl~~ 530 (548)
..+.++|.+..+|.++..++|.|.+ ++ +++++|+||++||++....... +....+.|+++ ||+|+.+
T Consensus 31 ~~~~~~~~s~~~~~~~~~~v~~P~~--~~--~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~ 106 (268)
T 1jjf_A 31 QVVNISYFSTATNSTRPARVYLPPG--YS--KDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTP 106 (268)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTT--CC--TTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEE
T ss_pred eEEEEEEeccccCCceEEEEEeCCC--CC--CCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEe
Confidence 4567788764368899999999965 43 2578999999999986532211 11235667776 5999999
Q ss_pred CCCCCC
Q 008927 531 NYGGST 536 (548)
Q Consensus 531 NyRGSt 536 (548)
|+||..
T Consensus 107 d~~~~~ 112 (268)
T 1jjf_A 107 NTNAAG 112 (268)
T ss_dssp CCCCCC
T ss_pred CCCCCC
Confidence 999863
No 272
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=97.56 E-value=0.00012 Score=69.83 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=49.8
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcc-ccccCccChHHHHHHhcCcEEEEeCCCCCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPT-SEARGILNLSIQYWTSRGWAFVDVNYGGSTGLS 539 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~-~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG 539 (548)
+...++-. +|..+...+|.|.+ ++.|+||++|||.+ ......|....+.|+++||.|+.+||||+..+.
T Consensus 39 ~~~~i~~~-~~~~~~~~~~~p~~--------~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~ 108 (262)
T 2pbl_A 39 ARLNLSYG-EGDRHKFDLFLPEG--------TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR 108 (262)
T ss_dssp EEEEEESS-SSTTCEEEEECCSS--------SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC
T ss_pred CccccccC-CCCCceEEEEccCC--------CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC
Confidence 33344433 55556677888842 35699999999863 234445677788999999999999999987654
No 273
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.55 E-value=0.013 Score=55.56 Aligned_cols=146 Identities=14% Similarity=0.134 Sum_probs=81.3
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.|++... ++.|++++.++ ...+.+.... ......+.++|+|+ | |+.... ...|++++..+..
T Consensus 79 ~l~v~~~-~~~i~~~d~~~--~~~~~~~~~~---~~~p~~i~~~~~g~-l-~v~~~~-------~~~i~~~~~~~~~--- 140 (270)
T 1rwi_B 79 TVYVTDF-NNRVVTLAAGS--NNQTVLPFDG---LNYPEGLAVDTQGA-V-YVADRG-------NNRVVKLAAGSKT--- 140 (270)
T ss_dssp CEEEEET-TTEEEEECTTC--SCCEECCCCS---CSSEEEEEECTTCC-E-EEEEGG-------GTEEEEECTTCCS---
T ss_pred CEEEEcC-CCEEEEEeCCC--ceEeeeecCC---cCCCcceEECCCCC-E-EEEECC-------CCEEEEEECCCce---
Confidence 4777665 77999999886 4444443220 12344677899997 3 333322 2468888766554
Q ss_pred cEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcE
Q 008927 236 PKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGEL 314 (548)
Q Consensus 236 ~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L 314 (548)
...... +........++|||+ | |+... ....|++++.+. +. ........ . .....+.+++||.|
T Consensus 141 ~~~~~~~~~~~p~~i~~~~~g~-l-~v~~~------~~~~i~~~~~~~-~~---~~~~~~~~-~--~~p~~i~~d~~g~l 205 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDNSGN-V-YVTDT------DNNRVVKLEAES-NN---QVVLPFTD-I--TAPWGIAVDEAGTV 205 (270)
T ss_dssp CEECCCCSCCSCCCEEECTTCC-E-EEEEG------GGTEEEEECTTT-CC---EEECCCSS-C--CSEEEEEECTTCCE
T ss_pred eEeeccccCCCceeEEEeCCCC-E-EEEEC------CCCEEEEEecCC-Cc---eEeecccC-C--CCceEEEECCCCCE
Confidence 333221 112234567899997 4 44422 135788888763 32 11111111 0 23455788999976
Q ss_pred EEEEeCCCCeeeEEEEeccCCee
Q 008927 315 FFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 315 ~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
|+.... . ..|++++.++...
T Consensus 206 ~v~~~~-~--~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 206 YVTEHN-T--NQVVKLLAGSTTS 225 (270)
T ss_dssp EEEETT-T--SCEEEECTTCSCC
T ss_pred EEEECC-C--CcEEEEcCCCCcc
Confidence 655432 2 3588888866543
No 274
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=97.55 E-value=7.5e-05 Score=73.35 Aligned_cols=64 Identities=17% Similarity=0.219 Sum_probs=49.4
Q ss_pred EEEee---ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCcc-ChHHHHHHhcCcEEEEeCCCCC
Q 008927 463 LIEFP---TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 463 ~i~~~---s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~-~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.++|. +. +|.++++++|.|.+ . .++.|+||++||+..... .| ....++++++||.|+.+|+|++
T Consensus 26 ~~~~~~~~~~-~~~~l~~~~~~P~~--~----~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~~~ 93 (304)
T 3d0k_A 26 AIPYLDDDRN-ADRPFTLNTYRPYG--Y----TPDRPVVVVQHGVLRNGA--DYRDFWIPAADRHKLLIVAPTFSDE 93 (304)
T ss_dssp EEEECC---C-TTCCEEEEEEECTT--C----CTTSCEEEEECCTTCCHH--HHHHHTHHHHHHHTCEEEEEECCTT
T ss_pred eEEecccCCC-CCceEEEEEEeCCC--C----CCCCcEEEEeCCCCCCHH--HHHHHHHHHHHHCCcEEEEeCCccc
Confidence 46676 65 88999999999964 2 235699999999987653 23 4456888999999999999964
No 275
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=97.53 E-value=0.00014 Score=71.61 Aligned_cols=71 Identities=15% Similarity=0.210 Sum_probs=51.3
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccCh---HHHHHHhcCcEEEEeCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~---~~Q~~asrGyaVl~~NyRGSt 536 (548)
..+.++|.|...|.+++.+ ++|. .+++|+||++||++.......|.. ..++++.+||+|+.||+++++
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~--------~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~ 78 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSG--------GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSS 78 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC--------STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTC
T ss_pred eEEEEEEECccCCCceEEE-ECCC--------CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCc
Confidence 4577888875257788887 5663 246899999999975333333332 247888999999999999987
Q ss_pred CCC
Q 008927 537 GLS 539 (548)
Q Consensus 537 GyG 539 (548)
+|.
T Consensus 79 ~~~ 81 (304)
T 1sfr_A 79 FYS 81 (304)
T ss_dssp TTC
T ss_pred ccc
Confidence 763
No 276
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.52 E-value=0.023 Score=54.81 Aligned_cols=234 Identities=9% Similarity=-0.026 Sum_probs=119.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|+++++.|+- ...++.|.+.++.. ++. +.+... .... ..++++++.++....+ ..+...+
T Consensus 74 ~~~~~~~~l~s-gs~Dg~v~iw~~~~--~~~~~~~~~h----~~~~--~~~~~~~~~l~s~~~~---------~~~~~~~ 135 (318)
T 4ggc_A 74 AWIKEGNYLAV-GTSSAEVQLWDVQQ--QKRLRNMTSH----SARV--GSLSWNSYILSSGSRS---------GHIHHHD 135 (318)
T ss_dssp EECTTSSEEEE-EETTSEEEEEETTT--TEEEEEEECC----SSCE--EEEEEETTEEEEEETT---------SEEEEEE
T ss_pred EECCCCCEEEE-EECCCcEEEeecCC--ceeEEEecCc----cceE--EEeecCCCEEEEEecC---------CceEeee
Confidence 46666665554 44567777778876 433 333322 1122 2356667765543222 2455666
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCcee-e-eEEEcCCCCCcccCCcC
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVY-K-RVCVAGFDPTIVESPTE 305 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~-~-~~~l~~~~~~~~~~~~~ 305 (548)
..++.. ....+...........++++|+.|+-... ...|.+.|+.. ++.. . ........ ..+..
T Consensus 136 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~--------d~~i~iwd~~~-~~~~~~~~~~~~~~~----~~v~~ 201 (318)
T 4ggc_A 136 VRVAEH-HVATLSGHSQEVCGLRWAPDGRHLASGGN--------DNLVNVWPSAP-GEGGWVPLQTFTQHQ----GAVKA 201 (318)
T ss_dssp TTSSSC-EEEEEECCSSCEEEEEECTTSSEEEEEET--------TSCEEEEESSC-BTTBSCCSEEECCCC----SCEEE
T ss_pred cCCCce-eEEEEcCccCceEEEEEcCCCCEEEEEec--------CcceeEEECCC-CcccccceeeecccC----CceEE
Confidence 666540 02223333444667789999998874441 24578888874 3211 1 12222222 34667
Q ss_pred ceECcCCc-EEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEE
Q 008927 306 PKWSSKGE-LFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLG 384 (548)
Q Consensus 306 ~~wspDG~-L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~ 384 (548)
..|+|++. ++++... .....|.+++...+........... .....+.+ +++.++.... .....|+
T Consensus 202 ~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~~~~~~~~~~~---------v~~~~~~~---~~~~~~~~sg-~~d~~i~ 267 (318)
T 4ggc_A 202 VAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAHSQ---------VCSILWSP---HYKELISGHG-FAQNQLV 267 (318)
T ss_dssp EEECTTSTTEEEEEEC-TTTCEEEEEETTTCCEEEEEECSSC---------EEEEEEET---TTTEEEEEEC-TTTCCEE
T ss_pred EEecCCCCcEEEEEec-CCCCEEEEEecccccccccccceee---------eeeeeecc---cccceEEEEE-cCCCEEE
Confidence 78999887 6655432 2223455666655544332211111 11123433 5666654432 2234577
Q ss_pred EEECCCCceE-eecCCCceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 385 ILDDFGHSLS-LLDIPFTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 385 ~~dl~~g~~~-~l~~~~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
++|+.+++.. .+......+..+ +++++.|+ .++. -..|.++|+.
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-S~s~---D~~v~iWd~~ 314 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAA---DETLRLWRCF 314 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEET---TTEEEEECCS
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEec---CCeEEEEECC
Confidence 7888887643 444333445554 56766543 4432 2456666654
No 277
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=97.51 E-value=8.8e-05 Score=76.71 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=50.7
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
.+.++++. +|.++++++|.|.+ +++.|+||++||+..... ..+....+.|+++||.|+.+|+||..
T Consensus 168 ~~~v~i~~--~g~~l~~~~~~P~~-------~~~~P~vv~~hG~~~~~~-~~~~~~~~~l~~~G~~V~~~D~~G~G 233 (415)
T 3mve_A 168 IKQLEIPF--EKGKITAHLHLTNT-------DKPHPVVIVSAGLDSLQT-DMWRLFRDHLAKHDIAMLTVDMPSVG 233 (415)
T ss_dssp EEEEEEEC--SSSEEEEEEEESCS-------SSCEEEEEEECCTTSCGG-GGHHHHHHTTGGGTCEEEEECCTTSG
T ss_pred eEEEEEEE--CCEEEEEEEEecCC-------CCCCCEEEEECCCCccHH-HHHHHHHHHHHhCCCEEEEECCCCCC
Confidence 56788887 68899999999953 346799999999864432 12334457889999999999999853
No 278
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=97.51 E-value=0.00015 Score=72.01 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=50.2
Q ss_pred EeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 465 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 465 ~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.+.+. ||.+++++++.|.+ ++.|+||++||++.... .|....+.|+++||.|+.+|+||.
T Consensus 39 ~~~~~-dg~~l~~~~~~p~~--------~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~ 98 (342)
T 3hju_A 39 HLVNA-DGQYLFCRYWKPTG--------TPKALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDHVGH 98 (342)
T ss_dssp EEECT-TSCEEEEEEECCSS--------CCSEEEEEECCTTCCGG--GGHHHHHHHHTTTEEEEEECCTTS
T ss_pred eEEcc-CCeEEEEEEeCCCC--------CCCcEEEEECCCCcccc--hHHHHHHHHHhCCCeEEEEcCCCC
Confidence 67777 99999999999853 34699999999986554 566778899999999999999984
No 279
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0083 Score=68.25 Aligned_cols=198 Identities=10% Similarity=-0.062 Sum_probs=112.1
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCC
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 272 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~ 272 (548)
+..++|+|||+.|+.-..+ ..|.+++..+++ ..........+....|+| |++|+-.+. .
T Consensus 20 V~~lafspdg~~lAsgs~D---------g~I~lw~~~~~~---~~~~~~~~~~V~~l~fsp-g~~L~S~s~--------D 78 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVT---------GEVHIYGQQQVE---VVIKLEDRSAIKEMRFVK-GIYLVVINA--------K 78 (902)
T ss_dssp EEEEEEETTTTEEEEEETT---------SEEEEECSTTCE---EEEECSSCCCEEEEEEET-TTEEEEEET--------T
T ss_pred cEEEEECCCCCEEEEEeCC---------CEEEEEeCCCcE---EEEEcCCCCCEEEEEEcC-CCEEEEEEC--------c
Confidence 4567899999987765433 367788887765 333333344567788999 887764441 3
Q ss_pred ceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecc-c-----ccc
Q 008927 273 AELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYS-L-----DAE 346 (548)
Q Consensus 273 ~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~-~-----~~d 346 (548)
..|.+.|++. ++. ...+.. . ..+....|+|||+++++... +| .|.++|+++++.....- . ...
T Consensus 79 ~~v~lWd~~~-~~~--~~~~~~-~----~~V~~v~~sp~g~~l~sgs~-dg--~V~lwd~~~~~~~~~~i~~~~~~~~~~ 147 (902)
T 2oaj_A 79 DTVYVLSLYS-QKV--LTTVFV-P----GKITSIDTDASLDWMLIGLQ-NG--SMIVYDIDRDQLSSFKLDNLQKSSFFP 147 (902)
T ss_dssp CEEEEEETTT-CSE--EEEEEC-S----SCEEEEECCTTCSEEEEEET-TS--CEEEEETTTTEEEEEEECCHHHHHTCS
T ss_pred CeEEEEECCC-CcE--EEEEcC-C----CCEEEEEECCCCCEEEEEcC-CC--cEEEEECCCCccccceecccccccccc
Confidence 5688889874 442 222332 2 45778899999996566554 44 46667777776532110 0 000
Q ss_pred cCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCC------------------CceeEee-
Q 008927 347 FSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIP------------------FTDIDNI- 406 (548)
Q Consensus 347 ~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~------------------~~~~~~~- 406 (548)
.+... ......|.| ++..++++...++ .+ +.|+.+++.. .+... ...+..+
T Consensus 148 ~~h~~---~V~sl~~sp---~~~~~l~~g~~dg--~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 148 AARLS---PIVSIQWNP---RDIGTVLISYEYV--TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp SSCCC---CCCEEEEET---TEEEEEEEECSSC--EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred ccCCC---CeEEEEEcc---CCCCEEEEEeCCC--cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 01111 122355664 4444555554444 35 7788877643 33211 0224433
Q ss_pred -eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 407 -TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 407 -s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
++++..|+ .++. -..|.++|+.+++
T Consensus 219 fspdg~~la-sgs~---Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 219 YHPNSLHII-TIHE---DNSLVFWDANSGH 244 (902)
T ss_dssp ECTTSSEEE-EEET---TCCEEEEETTTCC
T ss_pred EcCCCCEEE-EEEC---CCeEEEEECCCCc
Confidence 67776554 3332 2468888987765
No 280
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=97.50 E-value=0.00017 Score=69.40 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=49.9
Q ss_pred EeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 465 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 465 ~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.+.+. ||.+++.+++.|.+ ++.|+||++||.+.... .|....+.|+++||.|+.+|+||-
T Consensus 21 ~~~~~-~g~~l~~~~~~~~~--------~~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~ 80 (303)
T 3pe6_A 21 HLVNA-DGQYLFCRYWAPTG--------TPKALIFVSHGAGEHSG--RYEELARMLMGLDLLVFAHDHVGH 80 (303)
T ss_dssp EEECT-TSCEEEEEEECCSS--------CCSEEEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECCTTS
T ss_pred eEecC-CCeEEEEEEeccCC--------CCCeEEEEECCCCchhh--HHHHHHHHHHhCCCcEEEeCCCCC
Confidence 56776 99999999999853 34699999999876544 566778899999999999999985
No 281
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=97.49 E-value=0.00011 Score=70.96 Aligned_cols=70 Identities=14% Similarity=0.037 Sum_probs=50.7
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-cChHHHHHHhcCcEEEEeCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-~~~~~Q~~asrGyaVl~~NyRG 534 (548)
.+.+++.+..+|.++..++|.|.+ ++ +++++|+||++||++....... .....++++.+||+|+.+|.||
T Consensus 17 ~~~~~~~s~~~g~~~~~~v~~P~~--~~--~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~ 87 (280)
T 3i6y_A 17 HKQYSHVSNTLNCAMRFAIYLPPQ--AS--TGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSP 87 (280)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGG--GG--TTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSC
T ss_pred EEEEEEeccccCCeeEEEEEeCCC--CC--CCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcc
Confidence 456677664378999999999965 43 2578999999999976543211 1224577888999999999763
No 282
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=97.49 E-value=0.0002 Score=69.69 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=50.3
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccC---hHHHHHHhcCcEEEEeCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN---LSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~---~~~Q~~asrGyaVl~~NyRGSt 536 (548)
..+.++|+|..+|.++..+ |.|. + +|+||++||++.......|. ...++++++||+|+.||+++++
T Consensus 10 ~~~~~~~~S~~~~~~~~~~-~~P~--------~--~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~ 78 (280)
T 1r88_A 10 PYENLMVPSPSMGRDIPVA-FLAG--------G--PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYS 78 (280)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECC--------S--SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTS
T ss_pred CEEEEEEECcccCCcceEE-EeCC--------C--CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCC
Confidence 5678888875368889988 6773 2 38999999996433222332 2357889999999999999987
Q ss_pred CC
Q 008927 537 GL 538 (548)
Q Consensus 537 Gy 538 (548)
+|
T Consensus 79 ~~ 80 (280)
T 1r88_A 79 MY 80 (280)
T ss_dssp TT
T ss_pred cc
Confidence 76
No 283
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.0026 Score=67.57 Aligned_cols=198 Identities=8% Similarity=0.058 Sum_probs=115.5
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeE
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRL 167 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~L 167 (548)
..+..+++|| |..++-... +|...||.. . +....+. ....+.++ .+-.-+|+|||+.|+-.. .++.|
T Consensus 86 ~~V~~vawSPdG~~LAs~s~----dg~V~iwd~--~--~~l~~l~-~~~~~~~~--sv~svafSPDG~~LAsgs-~DGtV 153 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSN----NGNVSVFKD--N--KMLTNLD-SKGNLSSR--TYHCFEWNPIESSIVVGN-EDGEL 153 (588)
T ss_dssp CCEEEEEECSSSSCEEEEET----TSCEEEEET--T--EEEEECC-CSSCSTTT--CEEEEEECSSSSCEEEEE-TTSEE
T ss_pred CcEEEEEECCCCCEEEEEeC----CCcEEEEeC--C--ceeeecc-CCCccccc--cEEEEEEcCCCCEEEEEc-CCCEE
Confidence 5677889999 999987653 477677742 1 1111122 11110010 111347889888777765 56777
Q ss_pred EEEeCCCCCCCc--------eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC-cEE
Q 008927 168 YKHSIDSKDSSP--------LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE-PKV 238 (548)
Q Consensus 168 y~~~~~~~~~~~--------~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~-~~~ 238 (548)
-+.++.+ +.. ..+.....+....+...+||||| |+....+ +.++++|+.++...+ .+.
T Consensus 154 kIWd~~~--~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D---------~tVrlWd~~~~~~~~~~~t 220 (588)
T 2j04_A 154 QFFSIRK--NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN---------NSVFSMTVSASSHQPVSRM 220 (588)
T ss_dssp EEEECCC--CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT---------CCEEEECCCSSSSCCCEEE
T ss_pred EEEECCC--CccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC---------CeEEEEECCCCccccceee
Confidence 7777776 331 23321110011245667899999 5554443 357888888876210 123
Q ss_pred eeecC-CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE--CcCCcEE
Q 008927 239 LVSGS-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW--SSKGELF 315 (548)
Q Consensus 239 L~~~~-~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w--spDG~L~ 315 (548)
|..+. ..+...+|| |+.|| ++. ...|.+.++.+ +.. .....+.. ..+....| +|||+.+
T Consensus 221 L~~~h~~~V~svaFs--g~~LA-Sa~--------~~tIkLWd~~~-~~~--~~~~~gh~----~~V~~va~~~s~d~~~L 282 (588)
T 2j04_A 221 IQNASRRKITDLKIV--DYKVV-LTC--------PGYVHKIDLKN-YSI--SSLKTGSL----ENFHIIPLNHEKESTIL 282 (588)
T ss_dssp EECCCSSCCCCEEEE--TTEEE-EEC--------SSEEEEEETTT-TEE--EEEECSCC----SCCCEEEETTCSSCEEE
T ss_pred ecccccCcEEEEEEE--CCEEE-EEe--------CCeEEEEECCC-CeE--EEEEcCCC----ceEEEEEeeeCCCCCEE
Confidence 53333 456677898 67777 331 24789999873 431 12222433 56778899 9999877
Q ss_pred EEEeCCCCeeeEEEEe
Q 008927 316 FVTDRKNGFWNLHKWI 331 (548)
Q Consensus 316 ~~sd~~~g~~~Ly~~d 331 (548)
.++.. +|. .||..+
T Consensus 283 a~a~e-dG~-klw~~d 296 (588)
T 2j04_A 283 LMSNK-TSY-KVLLED 296 (588)
T ss_dssp EECSS-CEE-EEEESS
T ss_pred EEEcC-CCC-EEEeec
Confidence 77776 677 787765
No 284
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=97.48 E-value=0.00035 Score=63.48 Aligned_cols=55 Identities=11% Similarity=0.167 Sum_probs=45.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccCh--HHHHHHhcCcEEEEeCCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~--~~Q~~asrGyaVl~~NyRGSt 536 (548)
||.++++++|.|.+ +.|+||++||++.... .|.. ..+.|+++||.|+.+|+||..
T Consensus 12 ~g~~l~~~~~~~~~---------~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g 68 (207)
T 3bdi_A 12 NGTRVFQRKMVTDS---------NRRSIALFHGYSFTSM--DWDKADLFNNYSKIGYNVYAPDYPGFG 68 (207)
T ss_dssp TTEEEEEEEECCTT---------CCEEEEEECCTTCCGG--GGGGGTHHHHHHTTTEEEEEECCTTST
T ss_pred CCcEEEEEEEeccC---------CCCeEEEECCCCCCcc--ccchHHHHHHHHhCCCeEEEEcCCccc
Confidence 89999999999842 3589999999986543 4556 788999999999999999743
No 285
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=97.48 E-value=2.6e-05 Score=82.50 Aligned_cols=62 Identities=24% Similarity=0.387 Sum_probs=43.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC-ccChHHHHHHhcC-cEEEEeCCC-CCCCCCh
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTSRG-WAFVDVNYG-GSTGLSS 540 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~-~~~~~~Q~~asrG-yaVl~~NyR-GStGyG~ 540 (548)
|. ++..+|.|.+. .+++|+||++|||+...-.. .+....+.|+++| |+|+.+||| |+.||+.
T Consensus 81 dc--L~l~v~~P~~~------~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~ 145 (489)
T 1qe3_A 81 DC--LYVNVFAPDTP------SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLH 145 (489)
T ss_dssp CC--CEEEEEEECSS------CCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCC
T ss_pred CC--CEEEEEeCCCC------CCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCc
Confidence 55 55567778541 23489999999999654322 2223467888886 999999999 7777764
No 286
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.013 Score=59.94 Aligned_cols=158 Identities=8% Similarity=0.062 Sum_probs=85.1
Q ss_pred eeEE-ECCEEEEEeCCCCeEEEEeCCCC-CCC-ce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEE
Q 008927 149 AFRI-FGDTVIFSNYKDQRLYKHSIDSK-DSS-PL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIV 224 (548)
Q Consensus 149 ~~~~-~~~~i~F~~~~~~~Ly~~~~~~~-~~~-~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~ 224 (548)
+|++ ++..|+-. ..++.|.+.++... .+. .+ .++.. ....+..+.|+|+++.|+....+ ..|.
T Consensus 70 ~~s~~~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~d---------g~i~ 136 (437)
T 3gre_A 70 AVSPGETPYLITG-SDQGVIKIWNLKEIIVGEVYSSSLTYD---CSSTVTQITMIPNFDAFAVSSKD---------GQII 136 (437)
T ss_dssp EEECSSSCEEEEE-ETTSEEEEEEHHHHHTTCCCSCSEEEE---CSSCEEEEEECTTSSEEEEEETT---------SEEE
T ss_pred EECCCCCCEEEEe-cCCceEEEeECcccccCcccceeeecc---CCCCEEEEEEeCCCCEEEEEeCC---------CEEE
Confidence 5677 55555544 45676666665420 011 11 11101 01246678899999987765443 2455
Q ss_pred EEECC---CCCccCcEEeee-------------cCCcee--eeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCce
Q 008927 225 AIALN---GQNIQEPKVLVS-------------GSDFYA--FPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDV 286 (548)
Q Consensus 225 ~idl~---~g~~~~~~~L~~-------------~~~~~~--~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~ 286 (548)
++|++ +++ ...... ...... ...++|||+.|+.... ...|.+.|+.. ++
T Consensus 137 vwd~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~-~~- 203 (437)
T 3gre_A 137 VLKVNHYQQES---EVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN--------LSRVIIFDIRT-LE- 203 (437)
T ss_dssp EEEEEEEEETT---EEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET--------TSEEEEEETTT-CC-
T ss_pred EEEeccccCCc---eeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC--------CCeEEEEeCCC-Ce-
Confidence 55653 333 221111 111221 2237788988875541 35799999974 43
Q ss_pred eeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeE
Q 008927 287 YKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 287 ~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
....+...... ..+....|+|||++++.... +| .|..+|+.+++..
T Consensus 204 -~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~-dg--~i~iwd~~~~~~~ 249 (437)
T 3gre_A 204 -RLQIIENSPRH--GAVSSICIDEECCVLILGTT-RG--IIDIWDIRFNVLI 249 (437)
T ss_dssp -EEEEEECCGGG--CCEEEEEECTTSCEEEEEET-TS--CEEEEETTTTEEE
T ss_pred -eeEEEccCCCC--CceEEEEECCCCCEEEEEcC-CC--eEEEEEcCCccEE
Confidence 23334331001 45778899999996665544 44 4666777676653
No 287
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.46 E-value=0.051 Score=51.82 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=118.6
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
+.|++....++.|++++.++ +.+.+.... .......+.++|+|+. ++. ... ...|+++|. +++
T Consensus 68 g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v~-~~~-------~~~i~~~d~-~g~-- 130 (299)
T 2z2n_A 68 GEVWFTENAANKIGRITKKG---IIKEYTLPN--PDSAPYGITEGPNGDI-WFT-EMN-------GNRIGRITD-DGK-- 130 (299)
T ss_dssp SCEEEEETTTTEEEEECTTS---CEEEEECSS--TTCCEEEEEECTTSCE-EEE-ETT-------TTEEEEECT-TCC--
T ss_pred CCEEEeCCCCCeEEEECCCC---cEEEEeCCC--cCCCceeeEECCCCCE-EEE-ecC-------CceEEEECC-CCC--
Confidence 46777776677899999864 333332110 0123445678898863 332 321 146999998 555
Q ss_pred CcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 235 EPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 235 ~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
...+.. .........++|||+ | |+... ....|++++. ++++.. ..+.... .......+++||
T Consensus 131 -~~~~~~~~~~~~~~~i~~~~~g~-l-~v~~~------~~~~i~~~~~--~g~~~~-~~~~~~~----~~~~~i~~~~~g 194 (299)
T 2z2n_A 131 -IREYELPNKGSYPSFITLGSDNA-L-WFTEN------QNNAIGRITE--SGDITE-FKIPTPA----SGPVGITKGNDD 194 (299)
T ss_dssp -EEEEECSSTTCCEEEEEECTTSC-E-EEEET------TTTEEEEECT--TCCEEE-EECSSTT----CCEEEEEECTTS
T ss_pred -EEEecCCCCCCCCceEEEcCCCC-E-EEEeC------CCCEEEEEcC--CCcEEE-eeCCCCC----CcceeEEECCCC
Confidence 444322 122345667899996 4 34321 2357888887 354321 1122211 234557788999
Q ss_pred cEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 313 ~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
+||+.... . ..|+++++ +++.+.+... .....| ....+.+ + +.|++.. .+...|+++|+ +++
T Consensus 195 ~l~v~~~~-~--~~i~~~~~-~g~~~~~~~~-~~~~~~------~~i~~~~---~-g~l~v~~--~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 195 ALWFVEII-G--NKIGRITT-SGEITEFKIP-TPNARP------HAITAGA---G-IDLWFTE--WGANKIGRLTS-NNI 256 (299)
T ss_dssp SEEEEETT-T--TEEEEECT-TCCEEEEECS-STTCCE------EEEEECS---T-TCEEEEE--TTTTEEEEEET-TTE
T ss_pred CEEEEccC-C--ceEEEECC-CCcEEEEECC-CCCCCc------eeEEECC---C-CCEEEec--cCCceEEEECC-CCc
Confidence 87665432 2 36889998 6765544211 011111 1123331 3 3465443 23346888898 566
Q ss_pred eEeecCC--CceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 393 LSLLDIP--FTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 393 ~~~l~~~--~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.+.+..+ ......+...++.+++... ...|+++++++++
T Consensus 257 ~~~~~~~~~~~~~~~i~~~~g~l~v~~~----~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 257 IEEYPIQIKSAEPHGICFDGETIWFAME----CDKIGKLTLIKDN 297 (299)
T ss_dssp EEEEECSSSSCCEEEEEECSSCEEEEET----TTEEEEEEEC---
T ss_pred eEEEeCCCCCCccceEEecCCCEEEEec----CCcEEEEEcCccc
Confidence 6555332 2233333225566666542 2578888876543
No 288
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.45 E-value=0.0057 Score=60.98 Aligned_cols=220 Identities=9% Similarity=-0.034 Sum_probs=112.4
Q ss_pred ccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCC-eeeEEEC-CEEEEEeCC----
Q 008927 90 RLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGG-GAFRIFG-DTVIFSNYK---- 163 (548)
Q Consensus 90 ~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg-~~~~~~~-~~i~F~~~~---- 163 (548)
.+..+.++|.+++|....+-. .|...|+.++ + +..+.+.......... ... .....+. ++|++.+..
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~-~~~~~l~~~~-~--g~~~~~p~~~~~~~~~---~~~p~gv~~d~~g~L~v~D~g~~~~ 90 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFY-QPEMQVAELT-Q--DGLIPFPPQSGNAIIT---FDTVLGIKSDGNGIVWMLDNGNQSK 90 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGG-CCSCSEEEEE-T--TEEEESCCCCSSCCCC---CSCEEEEEECSSSEEEEEECHHHHT
T ss_pred CcceEEECCCCCEEEEeCCCC-CCceEEEEEC-C--CCeecCCCcccCcccc---eeEeeEEEEcCCCcEEEEcCCCCcC
Confidence 566788888567765543322 2324566664 3 3333221100000000 000 1223343 567777643
Q ss_pred -CCeEEEEeCCCCCCC-ceecCCC-C-CCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEe
Q 008927 164 -DQRLYKHSIDSKDSS-PLPITPD-Y-GEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVL 239 (548)
Q Consensus 164 -~~~Ly~~~~~~~~~~-~~~lT~~-~-~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L 239 (548)
..+|+++++++ ++ .+.+... . ........++.++|++..+++. .... .....|+++|+.+++ ..++
T Consensus 91 ~~~~i~~~d~~t--g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvt-d~~~----~~~~~i~v~d~~~g~---~~r~ 160 (343)
T 2qe8_A 91 SVPKLVAWDTLN--NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYIS-DPAP----DDKAALIRVDLQTGL---AARV 160 (343)
T ss_dssp SCCEEEEEETTT--TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEE-ECCS----GGGCEEEEEETTTCC---EEEE
T ss_pred CCCeEEEEECCC--CeEEEEEECChhhcccccccceEEEecCCCEEEEE-cCcc----CCCCeEEEEECCCCC---EEEE
Confidence 46899999876 44 3333211 0 0011234678899877765443 3210 013579999998876 4443
Q ss_pred eec-----C-------------------------CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecC--CCcee
Q 008927 240 VSG-----S-------------------------DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE--NGDVY 287 (548)
Q Consensus 240 ~~~-----~-------------------------~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~--~g~~~ 287 (548)
..+ . .......|||||+.|++... ....||.++.+. ++.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~-------~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM-------HSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES-------SCSEEEEEEHHHHTCTTCC
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC-------CCCeEEEEEHHHhcCCCCC
Confidence 211 0 01234679999998876542 245788887531 11111
Q ss_pred e------eEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 288 K------RVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 288 ~------~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
+ ...+ +.. .......+++||.||+.... ...|++++.++|+.+.+.
T Consensus 234 ~~~~~~~~~~~-g~~----g~pdgia~d~~G~l~va~~~---~~~V~~~d~~~G~~~~~~ 285 (343)
T 2qe8_A 234 DAELGSKIERY-SEK----PICDGISIDKDHNIYVGDLA---HSAIGVITSADRAYKLLV 285 (343)
T ss_dssp HHHHHTTCEEE-EEC----CSCSCEEECTTCCEEEEEGG---GTEEEEEETTTTEEEEEE
T ss_pred hhhhhcceEec-ccC----CCCceEEECCCCCEEEEccC---CCeEEEEECCCCCEEEEE
Confidence 1 0111 111 22345788999876655322 246889998567665554
No 289
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.45 E-value=0.028 Score=53.76 Aligned_cols=154 Identities=13% Similarity=0.117 Sum_probs=85.4
Q ss_pred CCEEEEEeCC-CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCC
Q 008927 154 GDTVIFSNYK-DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (548)
Q Consensus 154 ~~~i~F~~~~-~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~ 232 (548)
++.|++.... ++.|++++.++ ...+.+.... ......+.++|+|+ |++ .... ...|+++|.++..
T Consensus 88 ~g~l~v~~~~~~~~i~~~d~~g--~~~~~~~~~~---~~~~~~i~~~~~g~-l~v-~~~~-------~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 88 SGDIIVTERSPTHQIQIYNQYG--QFVRKFGATI---LQHPRGVTVDNKGR-IIV-VECK-------VMRVIIFDQNGNV 153 (286)
T ss_dssp TTEEEEEECGGGCEEEEECTTS--CEEEEECTTT---CSCEEEEEECTTSC-EEE-EETT-------TTEEEEECTTSCE
T ss_pred CCeEEEEcCCCCCEEEEECCCC--cEEEEecCcc---CCCceEEEEeCCCC-EEE-EECC-------CCEEEEEcCCCCE
Confidence 4577777643 67899998664 3333443211 12344677999997 333 2321 2479999976543
Q ss_pred ccCcEEeeec--CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc
Q 008927 233 IQEPKVLVSG--SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 233 ~~~~~~L~~~--~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp 310 (548)
...+... ........++|||+ | |++.. ....|++++.+ |+ ....+.... . ......+.+++
T Consensus 154 ---~~~~~~~~~~~~p~~i~~~~~g~-l-~v~~~------~~~~i~~~~~~--g~--~~~~~~~~g-~-~~~p~~i~~d~ 216 (286)
T 1q7f_A 154 ---LHKFGCSKHLEFPNGVVVNDKQE-I-FISDN------RAHCVKVFNYE--GQ--YLRQIGGEG-I-TNYPIGVGINS 216 (286)
T ss_dssp ---EEEEECTTTCSSEEEEEECSSSE-E-EEEEG------GGTEEEEEETT--CC--EEEEESCTT-T-SCSEEEEEECT
T ss_pred ---EEEeCCCCccCCcEEEEECCCCC-E-EEEEC------CCCEEEEEcCC--CC--EEEEEccCC-c-cCCCcEEEECC
Confidence 3344321 12345668999987 4 44422 14579998875 33 123333211 0 02345678899
Q ss_pred CCcEEEEEeCCCCeeeEEEEeccCCeeEee
Q 008927 311 KGELFFVTDRKNGFWNLHKWIESNNEVLAI 340 (548)
Q Consensus 311 DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l 340 (548)
||+||+.... . ...|.+++.++...+.+
T Consensus 217 ~G~l~v~~~~-~-~~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 217 NGEILIADNH-N-NFNLTIFTQDGQLISAL 244 (286)
T ss_dssp TCCEEEEECS-S-SCEEEEECTTSCEEEEE
T ss_pred CCCEEEEeCC-C-CEEEEEECCCCCEEEEE
Confidence 9986655432 2 12688888755444444
No 290
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.43 E-value=0.046 Score=52.00 Aligned_cols=208 Identities=11% Similarity=0.111 Sum_probs=111.1
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee-ecCCceeeeEECCCCCEEEEEEecCCCCCC
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV-SGSDFYAFPRMDPRGERMAWIEWHHPNMPW 270 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~-~~~~~~~~p~~SPDGk~La~~~~~~~~~p~ 270 (548)
....+.|+|++++|++|... ...|+.+|+. ++. .+.+. .+..-+...++.++|+ ++ ++...
T Consensus 28 ~lSGla~~~~~~~L~aV~d~--------~~~I~~ld~~-g~v--~~~i~l~g~~D~EGIa~~~~g~-~~-vs~E~----- 89 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINK--------PAAIVEMTTN-GDL--IRTIPLDFVKDLETIEYIGDNQ-FV-ISDER----- 89 (255)
T ss_dssp CEEEEEEETTTTEEEEEEET--------TEEEEEEETT-CCE--EEEEECSSCSSEEEEEECSTTE-EE-EEETT-----
T ss_pred CcceeEEeCCCCEEEEEECC--------CCeEEEEeCC-CCE--EEEEecCCCCChHHeEEeCCCE-EE-EEECC-----
Confidence 47788999999998887543 2579999998 542 44443 2222355667788875 33 44222
Q ss_pred CCceEEEEEecCCCceeeeEEEc-C-CCCCcccCCcCceECcCCc-EEEEEeCCCCeeeEEEEe--ccCCeeEeeccccc
Q 008927 271 DKAELWVGYISENGDVYKRVCVA-G-FDPTIVESPTEPKWSSKGE-LFFVTDRKNGFWNLHKWI--ESNNEVLAIYSLDA 345 (548)
Q Consensus 271 ~~~~L~v~~~~~~g~~~~~~~l~-~-~~~~~~~~~~~~~wspDG~-L~~~sd~~~g~~~Ly~~d--~~~g~~~~l~~~~~ 345 (548)
...|+++++..++.+....... . ...........++|+|+++ ||...++ ....||.++ +.+...+.+. ..
T Consensus 90 -~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~--~p~~i~~~~g~~~~~~l~i~~-~~- 164 (255)
T 3qqz_A 90 -DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK--NPIEVYKVNGLLSSNELHISK-DK- 164 (255)
T ss_dssp -TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES--SSEEEEEEESTTCSSCCEEEE-CH-
T ss_pred -CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc--CCceEEEEcccccCCceeeec-ch-
Confidence 3579999988655421112121 1 0000013456789999987 8777776 335788887 2222222221 00
Q ss_pred ccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceEeecCC--C-------ceeEeeeec-CCEEEE
Q 008927 346 EFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLSLLDIP--F-------TDIDNITLG-NDCLFV 415 (548)
Q Consensus 346 d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~~l~~~--~-------~~~~~~s~d-~~~l~~ 415 (548)
.+.......+.+..++.| ..+.+|+... ....|..+|.++.-+..+... . ..-.+++-| ++.+|+
T Consensus 165 ~~~~~~~~~d~S~l~~dp---~tg~lliLS~--~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI 239 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQ---QKNTLLVLSH--ESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI 239 (255)
T ss_dssp HHHHTCCSSCCCEEEEET---TTTEEEEEET--TTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE
T ss_pred hhccccccCCceeEEEcC---CCCeEEEEEC--CCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE
Confidence 000001112334445543 5667776653 345678888765433333322 1 123455322 345665
Q ss_pred EEecCCCCCeEEEEEc
Q 008927 416 EGASGVEPSSVAKVTL 431 (548)
Q Consensus 416 ~~ss~~~p~~l~~~d~ 431 (548)
+ +. |..+|++..
T Consensus 240 v-sE---~n~~y~f~~ 251 (255)
T 3qqz_A 240 V-SE---PNRFYRFTP 251 (255)
T ss_dssp E-ET---TTEEEEEEC
T ss_pred E-cC---CceEEEEEe
Confidence 5 43 458888864
No 291
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.43 E-value=0.017 Score=59.66 Aligned_cols=187 Identities=11% Similarity=0.157 Sum_probs=112.1
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.+++++..|+... .++.|.+.++.. ++. ..+... ........|+|||+.|+....+ ..|.++|
T Consensus 275 ~~~~~~~~l~~~~-~d~~i~vwd~~~--~~~~~~~~~~----~~~v~~~~~~~~~~~l~sg~~d---------g~i~vwd 338 (464)
T 3v7d_B 275 TVSGHGNIVVSGS-YDNTLIVWDVAQ--MKCLYILSGH----TDRIYSTIYDHERKRCISASMD---------TTIRIWD 338 (464)
T ss_dssp EEEEETTEEEEEE-TTSCEEEEETTT--TEEEEEECCC----SSCEEEEEEETTTTEEEEEETT---------SCEEEEE
T ss_pred EEcCCCCEEEEEe-CCCeEEEEECCC--CcEEEEecCC----CCCEEEEEEcCCCCEEEEEeCC---------CcEEEEE
Confidence 3556676665544 567888889875 443 233322 2346677899999987765433 3588889
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+.+++. ...+...........|+ +++|+-.. ....|.+.++.. +. ....... . .......
T Consensus 339 ~~~~~~--~~~~~~h~~~v~~~~~~--~~~l~s~s--------~dg~v~vwd~~~-~~--~~~~~~~-~----~~~~~~~ 398 (464)
T 3v7d_B 339 LENGEL--MYTLQGHTALVGLLRLS--DKFLVSAA--------ADGSIRGWDAND-YS--RKFSYHH-T----NLSAITT 398 (464)
T ss_dssp TTTTEE--EEEECCCSSCEEEEEEC--SSEEEEEE--------TTSEEEEEETTT-CC--EEEEEEC-T----TCCCEEE
T ss_pred CCCCcE--EEEEeCCCCcEEEEEEc--CCEEEEEe--------CCCcEEEEECCC-Cc--eeeeecC-C----CCccEEE
Confidence 988861 23333333445556666 57666443 135688889874 33 1222222 1 3455678
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEee-cccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAI-YSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGIL 386 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l-~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~ 386 (548)
|++||++++.... | .|..+|+++++.... ... ...+.+ ...+ +++.+++....++...++.+
T Consensus 399 ~~~~~~~l~~~~d--g--~i~iwd~~~g~~~~~~~~~---~~~~v~-----~v~~-----~~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 399 FYVSDNILVSGSE--N--QFNIYNLRSGKLVHANILK---DADQIW-----SVNF-----KGKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEECSSEEEEEET--T--EEEEEETTTCCEEESCTTT---TCSEEE-----EEEE-----ETTEEEEEEEETTEEEEEEE
T ss_pred EEeCCCEEEEecC--C--eEEEEECCCCcEEehhhcc---CCCcEE-----EEEe-----cCCEEEEEEEeCCeEEEEEe
Confidence 9999995555432 3 578888888875432 211 111122 2344 46778877778888888888
Q ss_pred EC
Q 008927 387 DD 388 (548)
Q Consensus 387 dl 388 (548)
|.
T Consensus 462 df 463 (464)
T 3v7d_B 462 DF 463 (464)
T ss_dssp EC
T ss_pred ec
Confidence 74
No 292
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=97.43 E-value=0.00017 Score=71.27 Aligned_cols=68 Identities=18% Similarity=0.119 Sum_probs=51.0
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccChHHHHHH-hcCcEEEEeCCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGSTG 537 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~~~~Q~~a-srGyaVl~~NyRGStG 537 (548)
..+.+++++. || .+..++| |. +++.|+||++|||.... ....+......|+ ..||.|+.+||||...
T Consensus 55 ~~~~~~i~~~-~g-~i~~~~y-~~--------~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~ 123 (311)
T 1jji_A 55 RVEDRTIKGR-NG-DIRVRVY-QQ--------KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPE 123 (311)
T ss_dssp EEEEEEEEET-TE-EEEEEEE-ES--------SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTT
T ss_pred eEEEEEecCC-CC-cEEEEEE-cC--------CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCC
Confidence 4678889887 77 8999999 42 23569999999997532 2234555667788 6899999999999765
Q ss_pred C
Q 008927 538 L 538 (548)
Q Consensus 538 y 538 (548)
.
T Consensus 124 ~ 124 (311)
T 1jji_A 124 H 124 (311)
T ss_dssp S
T ss_pred C
Confidence 3
No 293
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.41 E-value=0.048 Score=53.15 Aligned_cols=223 Identities=8% Similarity=0.024 Sum_probs=111.2
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
+|.++ +.|++++...++|++++.++ +..+.+... .....+.+++||+ | |++.... ....|+++|.
T Consensus 38 a~~~~-g~lyv~d~~~~~I~~~d~~g--~~~~~~~~~-----~~p~gia~~~dG~-l-~vad~~~-----~~~~v~~~d~ 102 (306)
T 2p4o_A 38 ASAPD-GTIFVTNHEVGEIVSITPDG--NQQIHATVE-----GKVSGLAFTSNGD-L-VATGWNA-----DSIPVVSLVK 102 (306)
T ss_dssp EECTT-SCEEEEETTTTEEEEECTTC--CEEEEEECS-----SEEEEEEECTTSC-E-EEEEECT-----TSCEEEEEEC
T ss_pred EECCC-CCEEEEeCCCCeEEEECCCC--ceEEEEeCC-----CCceeEEEcCCCc-E-EEEeccC-----CcceEEEEcC
Confidence 34343 35888887778999999875 322222221 2455678999998 3 3333211 1236899998
Q ss_pred CCCCccCcEEeeecC--CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCC----CCCcccC
Q 008927 229 NGQNIQEPKVLVSGS--DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGF----DPTIVES 302 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~--~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~----~~~~~~~ 302 (548)
.+++ .+.+.... .+...+...+++ .+ |+. +. ....||+++... +.. ......+. ... ..
T Consensus 103 ~~g~---~~~~~~~~~~~~~~g~~~~~~~-~~-~v~-d~-----~~g~i~~~d~~~-~~~-~v~~~~~~~~~~~~~--~~ 167 (306)
T 2p4o_A 103 SDGT---VETLLTLPDAIFLNGITPLSDT-QY-LTA-DS-----YRGAIWLIDVVQ-PSG-SIWLEHPMLARSNSE--SV 167 (306)
T ss_dssp TTSC---EEEEEECTTCSCEEEEEESSSS-EE-EEE-ET-----TTTEEEEEETTT-TEE-EEEEECGGGSCSSTT--CC
T ss_pred CCCe---EEEEEeCCCccccCcccccCCC-cE-EEE-EC-----CCCeEEEEeCCC-CcE-eEEEECCcccccccc--CC
Confidence 8887 66655432 223334445544 33 344 21 135899999763 321 11111110 000 01
Q ss_pred CcCc-eECcCCcEEEEEeCCCCeeeEEEEeccC-CeeE--eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC
Q 008927 303 PTEP-KWSSKGELFFVTDRKNGFWNLHKWIESN-NEVL--AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (548)
Q Consensus 303 ~~~~-~wspDG~L~~~sd~~~g~~~Ly~~d~~~-g~~~--~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~ 378 (548)
...| ..++||+.+|++|. +...|+++++++ ++.. .+.. ....| ..+.+.+ ++ .||++ ..
T Consensus 168 ~~~pngis~dg~~lyv~d~--~~~~I~~~~~~~~g~~~~~~~~~---~~~~P------~gi~vd~---dG-~l~va-~~- 230 (306)
T 2p4o_A 168 FPAANGLKRFGNFLYVSNT--EKMLLLRIPVDSTDKPGEPEIFV---EQTNI------DDFAFDV---EG-NLYGA-TH- 230 (306)
T ss_dssp SCSEEEEEEETTEEEEEET--TTTEEEEEEBCTTSCBCCCEEEE---ESCCC------SSEEEBT---TC-CEEEE-CB-
T ss_pred CCcCCCcCcCCCEEEEEeC--CCCEEEEEEeCCCCCCCccEEEe---ccCCC------CCeEECC---CC-CEEEE-eC-
Confidence 1111 12788885556665 234688888764 4321 1110 11112 1234432 44 45443 32
Q ss_pred CeEEEEEEECCCCceEee---cCCCceeEee--e---ecCCEEEEEEec
Q 008927 379 GRSYLGILDDFGHSLSLL---DIPFTDIDNI--T---LGNDCLFVEGAS 419 (548)
Q Consensus 379 g~~~L~~~dl~~g~~~~l---~~~~~~~~~~--s---~d~~~l~~~~ss 419 (548)
+...|.++|.+ |+...+ ..+......+ . +++++||+....
T Consensus 231 ~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 23458889875 555432 2332222333 3 466777776653
No 294
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=97.40 E-value=7e-05 Score=80.20 Aligned_cols=64 Identities=20% Similarity=0.275 Sum_probs=44.3
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-cChHHHHHHh-cCcEEEEeCCC-CCCCCCh
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTS-RGWAFVDVNYG-GSTGLSS 540 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-~~~~~Q~~as-rGyaVl~~NyR-GStGyG~ 540 (548)
+. |...+ .+|.|.+. . +++++|+||+||||+...-... |+. ..|++ +|++|+.+||| |..||+.
T Consensus 95 ~e-dcl~l--nv~~P~~~--~--~~~~~Pv~v~iHGG~~~~g~~~~~~~--~~la~~~g~vvv~~nYRlg~~gf~~ 161 (542)
T 2h7c_A 95 SE-DCLYL--NIYTPADL--T--KKNRLPVMVWIHGGGLMVGAASTYDG--LALAAHENVVVVTIQYRLGIWGFFS 161 (542)
T ss_dssp ES-CCCEE--EEEECSCT--T--SCCCEEEEEEECCSTTTSCCSTTSCC--HHHHHHHTCEEEEECCCCHHHHHCC
T ss_pred CC-CCcEE--EEEECCCC--C--CCCCCCEEEEECCCcccCCCccccCH--HHHHhcCCEEEEecCCCCccccCCC
Confidence 45 77555 47778642 1 2467899999999987544332 333 34554 89999999999 7777654
No 295
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.40 E-value=0.018 Score=59.41 Aligned_cols=152 Identities=6% Similarity=0.036 Sum_probs=85.9
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~ 233 (548)
++.||+.+.. ++|+++++++ +..+.+... ..+-..+.++++|+.|+.. ..+.. .....++.++.+++-
T Consensus 149 ~g~Lyv~d~~-~~I~~id~~~--~~v~~~~~~----~~~P~~ia~d~~G~~lyva-d~~~~---~~~~~v~~~~~~g~~- 216 (430)
T 3tc9_A 149 HNHLYLVGEQ-HPTRLIDFEK--EYVSTVYSG----LSKVRTICWTHEADSMIIT-NDQNN---NDRPNNYILTRESGF- 216 (430)
T ss_dssp EEEEEEEEBT-EEEEEEETTT--TEEEEEECC----CSCEEEEEECTTSSEEEEE-ECCSC---TTSEEEEEEEGGGTS-
T ss_pred CCeEEEEeCC-CcEEEEECCC--CEEEEEecC----CCCcceEEEeCCCCEEEEE-eCCCC---cccceEEEEeCCCce-
Confidence 4577777654 7899999986 555555432 1234567899999976554 43211 123457777766543
Q ss_pred cCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 234 QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 234 ~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
...+.+.... .-...+++|++.+|++..+ ...+|+.++.+. +... ....... . .....+.|+|||+
T Consensus 217 ~~~~~l~~~~-~p~giavdp~~g~lyv~d~-------~~~~V~~~~~~~-~~~~--~~~~~~~-~--~~P~gia~~pdG~ 282 (430)
T 3tc9_A 217 KVITELTKGQ-NCNGAETHPINGELYFNSW-------NAGQVFRYDFTT-QETT--PLFTIQD-S--GWEFHIQFHPSGN 282 (430)
T ss_dssp CSEEEEEECS-SCCCEEECTTTCCEEEEET-------TTTEEEEEETTT-TEEE--EEEECSS-S--SCCEEEEECTTSS
T ss_pred eeeeeeccCC-CceEEEEeCCCCEEEEEEC-------CCCEEEEEECCC-CcEE--EEEEcCC-C--CcceeEEEcCCCC
Confidence 1013343322 2234578995555654442 246899999873 4321 1111111 1 2345689999999
Q ss_pred EEEEEeCCCCeeeEEEEecc
Q 008927 314 LFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~ 333 (548)
.+|++|. +...|++++.+
T Consensus 283 ~lyv~d~--~~~~I~~~~~d 300 (430)
T 3tc9_A 283 YAYIVVV--NQHYILRSDYD 300 (430)
T ss_dssp EEEEEET--TTTEEEEEEEE
T ss_pred EEEEEEC--CCCEEEEEeCC
Confidence 4455554 22467776654
No 296
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=97.40 E-value=0.00039 Score=68.59 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=52.1
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.++...+++. ||.+++++.+.|.+. ..+..|+||++||-.... ..|...+++|+++||.|+.+|+||.
T Consensus 6 ~~~~~~i~~~-dG~~l~~~~~~p~~~-----~~~~~~~VvllHG~g~~~--~~~~~~~~~L~~~G~~Vi~~D~rGh 73 (305)
T 1tht_A 6 KTIAHVLRVN-NGQELHVWETPPKEN-----VPFKNNTILIASGFARRM--DHFAGLAEYLSTNGFHVFRYDSLHH 73 (305)
T ss_dssp SCEEEEEEET-TTEEEEEEEECCCTT-----SCCCSCEEEEECTTCGGG--GGGHHHHHHHHTTTCCEEEECCCBC
T ss_pred cceEEEEEcC-CCCEEEEEEecCccc-----CCCCCCEEEEecCCccCc--hHHHHHHHHHHHCCCEEEEeeCCCC
Confidence 3566678887 999999999988531 123458899999976543 2466778899999999999999975
No 297
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=97.39 E-value=0.00053 Score=68.62 Aligned_cols=73 Identities=21% Similarity=0.064 Sum_probs=52.8
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc----cChHHHHHHhcCcEEEEeCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI----LNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~----~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+.+.+++++. ||..++.+.+.|.... .. +....|+||++||.+.....+. +....+.|+++||.|+.+|+||.
T Consensus 26 ~~~~~~~~~~-dG~~l~~~~~~~~~~~-~~-~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 26 PAEEYEVVTE-DGYILGIDRIPYGRKN-SE-NIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp CCEEEEEECT-TSEEEEEEEECSCSSC-CT-TTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CceEEEeEcC-CCCEEEEEEecCCCCC-cc-ccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 4578889998 9999999999874310 00 1124689999999987654322 12345589999999999999984
No 298
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=97.38 E-value=0.00011 Score=70.74 Aligned_cols=70 Identities=13% Similarity=0.046 Sum_probs=49.6
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-cChHHHHHHhcCcEEEEeCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.+.+++.+..+|.+++..+|.|.+ ++ ++++|+||++||++....... .....++++.+||+|+.+|+||.
T Consensus 15 ~~~~~~~s~~~g~~~~~~v~~P~~--~~---~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~ 85 (278)
T 3e4d_A 15 QGVFSHQSETLKSEMTFAVYVPPK--AI---HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPR 85 (278)
T ss_dssp EEEEEEEETTTTEEEEEEEEECGG--GG---TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCC
T ss_pred EEEEEEeccccCCcceEEEEcCCC--CC---CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCccc
Confidence 355667554378999999999964 31 467899999999976543211 11234566777999999999753
No 299
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.003 Score=60.99 Aligned_cols=150 Identities=7% Similarity=0.039 Sum_probs=89.3
Q ss_pred eeEE-ECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRI-FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~-~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|.+ +++.|+. ...++.|.+.+.. ...+.+.... ........|+|+++ ++....+ ..|.++|
T Consensus 149 ~~~~~~~~~l~~-~~~d~~i~i~d~~---~~~~~~~~~~---~~~i~~~~~~~~~~-~~~~~~d---------g~i~i~d 211 (313)
T 3odt_A 149 KVVSFSENKFLT-ASADKTIKLWQND---KVIKTFSGIH---NDVVRHLAVVDDGH-FISCSND---------GLIKLVD 211 (313)
T ss_dssp EEEETTTTEEEE-EETTSCEEEEETT---EEEEEECSSC---SSCEEEEEEEETTE-EEEEETT---------SEEEEEE
T ss_pred EEccCCCCEEEE-EECCCCEEEEecC---ceEEEEeccC---cccEEEEEEcCCCe-EEEccCC---------CeEEEEE
Confidence 4555 4555544 4456778877743 2233343311 23456778999998 5443322 4689999
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+.+++. ...+...........|+|||+ |+... ....|++.++.. ++. ...+.... ..+....
T Consensus 212 ~~~~~~--~~~~~~~~~~i~~~~~~~~~~-l~~~~--------~dg~v~iwd~~~-~~~--~~~~~~~~----~~i~~~~ 273 (313)
T 3odt_A 212 MHTGDV--LRTYEGHESFVYCIKLLPNGD-IVSCG--------EDRTVRIWSKEN-GSL--KQVITLPA----ISIWSVD 273 (313)
T ss_dssp TTTCCE--EEEEECCSSCEEEEEECTTSC-EEEEE--------TTSEEEEECTTT-CCE--EEEEECSS----SCEEEEE
T ss_pred CCchhh--hhhhhcCCceEEEEEEecCCC-EEEEe--------cCCEEEEEECCC-Cce--eEEEeccC----ceEEEEE
Confidence 998871 233333344567789999994 55333 135799999874 442 33343332 4577889
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCee
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
|+|||+++. ... +| .|+.+++.+++.
T Consensus 274 ~~~~~~~~~-~~~-dg--~i~iw~~~~~~~ 299 (313)
T 3odt_A 274 CMSNGDIIV-GSS-DN--LVRIFSQEKSRW 299 (313)
T ss_dssp ECTTSCEEE-EET-TS--CEEEEESCGGGC
T ss_pred EccCCCEEE-EeC-CC--cEEEEeCCCCce
Confidence 999999443 333 44 466666666543
No 300
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.33 E-value=0.052 Score=51.10 Aligned_cols=176 Identities=15% Similarity=0.116 Sum_probs=97.6
Q ss_pred eeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCc
Q 008927 220 TTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (548)
Q Consensus 220 ~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~ 299 (548)
.+.|.++|+++|+ ...-..-+..+..-.+.++|++|.-+.| ....++++|.++ .++ ...+.-..
T Consensus 42 ~S~v~~vD~~tgk---v~~~~~l~~~~fgeGi~~~~~~ly~ltw-------~~~~v~v~D~~t-l~~--~~ti~~~~--- 105 (243)
T 3mbr_X 42 RSSVRKVDLETGR---ILQRAEVPPPYFGAGIVAWRDRLIQLTW-------RNHEGFVYDLAT-LTP--RARFRYPG--- 105 (243)
T ss_dssp SCEEEEEETTTCC---EEEEEECCTTCCEEEEEEETTEEEEEES-------SSSEEEEEETTT-TEE--EEEEECSS---
T ss_pred CceEEEEECCCCC---EEEEEeCCCCcceeEEEEeCCEEEEEEe-------eCCEEEEEECCc-CcE--EEEEeCCC---
Confidence 4689999999998 4332222222222345667888865553 467899999874 442 22333211
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeE-eecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVL-AIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~-~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~ 378 (548)
.....++||+.+|++|. + ..|+.+|+++.++. .+.-.. .+.+. ...+.+.+ .+++||... -
T Consensus 106 ----~Gwglt~dg~~L~vSdg-s--~~l~~iDp~t~~~~~~I~V~~--~g~~~--~~lNeLe~-----~~G~lyanv--w 167 (243)
T 3mbr_X 106 ----EGWALTSDDSHLYMSDG-T--AVIRKLDPDTLQQVGSIKVTA--GGRPL--DNLNELEW-----VNGELLANV--W 167 (243)
T ss_dssp ----CCCEEEECSSCEEEECS-S--SEEEEECTTTCCEEEEEECEE--TTEEC--CCEEEEEE-----ETTEEEEEE--T
T ss_pred ----CceEEeeCCCEEEEECC-C--CeEEEEeCCCCeEEEEEEEcc--CCccc--ccceeeEE-----eCCEEEEEE--C
Confidence 12344578885566764 3 46999999887653 232110 00010 01112333 245666332 2
Q ss_pred CeEEEEEEECCCCceE-eecCC------------C-ceeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 379 GRSYLGILDDFGHSLS-LLDIP------------F-TDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 379 g~~~L~~~dl~~g~~~-~l~~~------------~-~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
....|.++|+++|++. .+... . ....++ ++++++|++++- .-+.+|.+.+.
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK---~wp~~~~v~~~ 234 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK---RWPMLYEIRLT 234 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET---TCSEEEEEEEC
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC---CCCcEEEEEEe
Confidence 2347999999999865 33311 1 123444 456777776653 34678877653
No 301
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.32 E-value=0.065 Score=52.72 Aligned_cols=158 Identities=9% Similarity=0.041 Sum_probs=84.2
Q ss_pred EEEEEeCCCCeEEEEeCCCCCC--CceecCC----CC-CCCCceecceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDS--SPLPITP----DY-GEPLVSYADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~--~~~~lT~----~~-~~~~~~~~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
.|++++..+++|++++.++ . ....+.. .. .........++++| +|. |++ +.... ...|+++|
T Consensus 103 ~l~v~d~~~~~v~~~~~~g--~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv-~d~~~------~~~I~~~~ 172 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHS--KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFV-SDGYC------NSRIVQFS 172 (329)
T ss_dssp CEEEEETTTTEEEEECTTC--SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEE-EECSS------CCEEEEEC
T ss_pred CEEEEECCCCEEEEEeCCC--CeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEE-EeCCC------CCeEEEEc
Confidence 4888877778999999876 3 2333321 00 00011234578999 555 433 33211 25789999
Q ss_pred CCCCCccCcEEeee-cC------C---ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCC
Q 008927 228 LNGQNIQEPKVLVS-GS------D---FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDP 297 (548)
Q Consensus 228 l~~g~~~~~~~L~~-~~------~---~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~ 297 (548)
.++.. ...+.. +. . .-...+++||+..|+ ++.. ....|.+++.+ +|++ ...+.....
T Consensus 173 ~~g~~---~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~-v~d~------~~~~I~~~~~~-~G~~--~~~~~~~~~ 239 (329)
T 3fvz_A 173 PSGKF---VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLC-VADR------ENGRIQCFKTD-TKEF--VREIKHASF 239 (329)
T ss_dssp TTSCE---EEEECEECCSSSCCTTEESCEEEEEEETTTTEEE-EEET------TTTEEEEEETT-TCCE--EEEECCTTT
T ss_pred CCCCE---EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEE-EEEC------CCCEEEEEECC-CCcE--EEEEecccc
Confidence 65543 333321 11 1 134557899966665 4422 24679999987 3553 233322110
Q ss_pred CcccCCcCceECcCCcEEEEEeC-----CCCeeeEEEEeccCCeeEee
Q 008927 298 TIVESPTEPKWSSKGELFFVTDR-----KNGFWNLHKWIESNNEVLAI 340 (548)
Q Consensus 298 ~~~~~~~~~~wspDG~L~~~sd~-----~~g~~~Ly~~d~~~g~~~~l 340 (548)
. .......++| | +++..+. ..+...+++++..+|+....
T Consensus 240 ~--~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 240 G--RNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp T--TCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred C--CCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 1 2344567888 4 3333332 12234688888878876544
No 302
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.31 E-value=0.033 Score=53.06 Aligned_cols=213 Identities=10% Similarity=0.170 Sum_probs=118.5
Q ss_pred HHhcCCCccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCC-cccCCCCCCccccceeeCCeeeEEECCEEEEE
Q 008927 83 VVSGASKRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP-SDITPKEYAVRTTAQEYGGGAFRIFGDTVIFS 160 (548)
Q Consensus 83 ~l~~~~~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~-~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~ 160 (548)
.|......++.+.++| ++++|.+... ...|+.++.. +.. +.+.-.++ ..+.|-++. .++.++.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~-----~~~I~~ld~~--g~v~~~i~l~g~------~D~EGIa~~-~~g~~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK-----PAAIVEMTTN--GDLIRTIPLDFV------KDLETIEYI-GDNQFVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET-----TEEEEEEETT--CCEEEEEECSSC------SSEEEEEEC-STTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC-----CCeEEEEeCC--CCEEEEEecCCC------CChHHeEEe-CCCEEEEE
Confidence 4445556788999999 7778777754 2347777665 233 22211111 123333332 23356666
Q ss_pred eCCCCeEEEEeCCCCCCCc---eecC-CC-CCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE--CCCCCc
Q 008927 161 NYKDQRLYKHSIDSKDSSP---LPIT-PD-YGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA--LNGQNI 233 (548)
Q Consensus 161 ~~~~~~Ly~~~~~~~~~~~---~~lT-~~-~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id--l~~g~~ 233 (548)
++++++|++++++.+ ++. ..++ +. .......+..++|+|++++|+.+++.. ...||.++ +.+..
T Consensus 87 ~E~~~~l~~~~v~~~-~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-------p~~i~~~~g~~~~~~- 157 (255)
T 3qqz_A 87 DERDYAIYVISLTPN-SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-------PIEVYKVNGLLSSNE- 157 (255)
T ss_dssp ETTTTEEEEEEECTT-CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-------SEEEEEEESTTCSSC-
T ss_pred ECCCCcEEEEEcCCC-CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-------CceEEEEcccccCCc-
Confidence 667789998887652 321 2221 11 001123456789999999987776553 24789888 22222
Q ss_pred cCcEEeee----cC---CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCC---cccCC
Q 008927 234 QEPKVLVS----GS---DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT---IVESP 303 (548)
Q Consensus 234 ~~~~~L~~----~~---~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~---~~~~~ 303 (548)
.+++.. .. .-.+...+.|.-.+|..++ + ....|.++|.+ |++.....+..+..+ .....
T Consensus 158 --l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS-~------~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qp 226 (255)
T 3qqz_A 158 --LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLS-H------ESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQA 226 (255)
T ss_dssp --CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEE-T------TTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSE
T ss_pred --eeeecchhhccccccCCceeEEEcCCCCeEEEEE-C------CCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCC
Confidence 344321 11 1135667888777776665 2 24568888765 444344445432100 00123
Q ss_pred cCceECcCCcEEEEEeCCCCeeeEEEEecc
Q 008927 304 TEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 304 ~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
...++.++|+||++++. + .+|++...
T Consensus 227 EGia~d~~G~lyIvsE~-n---~~y~f~~~ 252 (255)
T 3qqz_A 227 EGVAMDASGNIYIVSEP-N---RFYRFTPQ 252 (255)
T ss_dssp EEEEECTTCCEEEEETT-T---EEEEEEC-
T ss_pred CeeEECCCCCEEEEcCC-c---eEEEEEec
Confidence 45689999998888765 2 57777643
No 303
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=97.29 E-value=0.00032 Score=66.43 Aligned_cols=67 Identities=13% Similarity=0.095 Sum_probs=49.6
Q ss_pred eEEEe-eccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 462 ELIEF-PTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 462 e~i~~-~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
+.+++ ++. ||.+++.+.+.|.+ ...|+||++||++.......+....++++++||.|+.+|+||...
T Consensus 12 ~~~~~~~~~-~g~~l~~~~~~~~~--------~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 79 (270)
T 3llc_A 12 HAITVGQGS-DARSIAALVRAPAQ--------DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGA 79 (270)
T ss_dssp EEEEESSGG-GCEEEEEEEECCSS--------TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTT
T ss_pred ceEEEeecc-CcceEEEEeccCCC--------CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCC
Confidence 44555 666 99999988887742 235999999999865443334456678889999999999998644
No 304
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.26 E-value=0.074 Score=54.90 Aligned_cols=152 Identities=13% Similarity=0.046 Sum_probs=83.7
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~ 233 (548)
++.|++.+.. .+|+++++++ +..+.+... ......++++++|+ |++ ...... .....++.++..++..
T Consensus 152 ~g~Lyv~D~~-~~I~~id~~~--g~v~~~~~~----~~~P~giavd~dG~-lyV-ad~~~~---~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 152 YDDLYWVGQR-DAFRHVDFVN--QYVDIKTTN----IGQCADVNFTLNGD-MVV-VDDQSS---DTNTGIYLFTRASGFT 219 (433)
T ss_dssp TCEEEEECBT-SCEEEEETTT--TEEEEECCC----CSCEEEEEECTTCC-EEE-EECCSC---TTSEEEEEECGGGTTC
T ss_pred CCEEEEEeCC-CCEEEEECCC--CEEEEeecC----CCCccEEEECCCCC-EEE-EcCCCC---cccceEEEEECCCCee
Confidence 3678887655 7899999975 566555432 12345678999999 544 333210 1124567777655431
Q ss_pred cCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 234 QEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 234 ~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
....+... ..-...+++|+...|. +. +. ....|+.++.+ +|.+.. .++.... . .....+.|+|||+
T Consensus 220 -~~~~~~~~-~~P~giavd~~~G~ly-v~-d~-----~~~~V~~~d~~-~g~~~~-~~~~~~~-~--~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 220 -ERLSLCNA-RGAKTCAVHPQNGKIY-YT-RY-----HHAMISSYDPA-TGTLTE-EEVMMDT-K--GSNFHIVWHPTGD 285 (433)
T ss_dssp -CEEEEEEC-SSBCCCEECTTTCCEE-EC-BT-----TCSEEEEECTT-TCCEEE-EEEECSC-C--SSCEEEEECTTSS
T ss_pred -cccccccc-CCCCEEEEeCCCCeEE-EE-EC-----CCCEEEEEECC-CCeEEE-EEeccCC-C--CCcccEEEeCCCC
Confidence 01233322 2223457899444464 44 11 24579998876 354311 1222211 1 2223589999999
Q ss_pred EEEEEeCCCCeeeEEEEecc
Q 008927 314 LFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~d~~ 333 (548)
.+|++|. +...|++++.+
T Consensus 286 ~LYvad~--~~~~I~~~~~d 303 (433)
T 4hw6_A 286 WAYIIYN--GKHCIYRVDYN 303 (433)
T ss_dssp EEEEEET--TTTEEEEEEBC
T ss_pred EEEEEeC--CCCEEEEEeCC
Confidence 5555554 33468887754
No 305
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.23 E-value=0.034 Score=52.39 Aligned_cols=158 Identities=10% Similarity=-0.010 Sum_probs=89.0
Q ss_pred EEECCEEEEEeCCC--CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 151 RIFGDTVIFSNYKD--QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 151 ~~~~~~i~F~~~~~--~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
..+++.|+.+.... ..|.++|+++ ++..+-.... ...++. ...+++++|+.+ ... .+.++++|.
T Consensus 27 ~~~~~~LyestG~~g~S~v~~vD~~t--gkv~~~~~l~---~~~fge-Gi~~~~~~ly~l-tw~-------~~~v~v~D~ 92 (243)
T 3mbr_X 27 FYLRGHLYESTGETGRSSVRKVDLET--GRILQRAEVP---PPYFGA-GIVAWRDRLIQL-TWR-------NHEGFVYDL 92 (243)
T ss_dssp EEETTEEEEEECCTTSCEEEEEETTT--CCEEEEEECC---TTCCEE-EEEEETTEEEEE-ESS-------SSEEEEEET
T ss_pred EEECCEEEEECCCCCCceEEEEECCC--CCEEEEEeCC---CCccee-EEEEeCCEEEEE-Eee-------CCEEEEEEC
Confidence 34677888886543 4899999987 6553322211 111222 244567886554 322 358999999
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
++.+. ...+.-+.. ...+.+||++|+ ++ +. ..+|+++|.++ .++.....+.... ........+.|
T Consensus 93 ~tl~~--~~ti~~~~~---Gwglt~dg~~L~-vS-dg------s~~l~~iDp~t-~~~~~~I~V~~~g-~~~~~lNeLe~ 157 (243)
T 3mbr_X 93 ATLTP--RARFRYPGE---GWALTSDDSHLY-MS-DG------TAVIRKLDPDT-LQQVGSIKVTAGG-RPLDNLNELEW 157 (243)
T ss_dssp TTTEE--EEEEECSSC---CCEEEECSSCEE-EE-CS------SSEEEEECTTT-CCEEEEEECEETT-EECCCEEEEEE
T ss_pred CcCcE--EEEEeCCCC---ceEEeeCCCEEE-EE-CC------CCeEEEEeCCC-CeEEEEEEEccCC-cccccceeeEE
Confidence 98762 233332221 224567898774 66 32 45799999874 3322222232211 00012234566
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeEeec
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIY 341 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~ 341 (548)
. ||+||...-. + ..|.++|+++|++....
T Consensus 158 ~-~G~lyanvw~-s--~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 158 V-NGELLANVWL-T--SRIARIDPASGKVVAWI 186 (243)
T ss_dssp E-TTEEEEEETT-T--TEEEEECTTTCBEEEEE
T ss_pred e-CCEEEEEECC-C--CeEEEEECCCCCEEEEE
Confidence 5 7876644322 2 37999999999976543
No 306
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.21 E-value=0.15 Score=50.06 Aligned_cols=147 Identities=11% Similarity=0.049 Sum_probs=75.7
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee---
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS--- 241 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~--- 241 (548)
+.|++++.++ ++........ .......++++|+|+ |+ +.... ...|+++|.++.. .....+..
T Consensus 69 ~~i~~~d~~~--g~~~~~~~~~--~~~~p~gia~d~~g~-l~-v~d~~-------~~~v~~~~~~g~~-~~~~~~~~~~~ 134 (329)
T 3fvz_A 69 DTILVIDPNN--AEILQSSGKN--LFYLPHGLSIDTDGN-YW-VTDVA-------LHQVFKLDPHSKE-GPLLILGRSMQ 134 (329)
T ss_dssp CCEEEECTTT--CCEEEEECTT--TCSSEEEEEECTTSC-EE-EEETT-------TTEEEEECTTCSS-CCSEEESBTTB
T ss_pred CcEEEEECCC--CeEEeccCCC--ccCCceEEEECCCCC-EE-EEECC-------CCEEEEEeCCCCe-EEEEEecccCC
Confidence 3689998875 4443222110 011344678999998 43 33332 2479999987762 00333321
Q ss_pred -c--CC---ceeeeEECC-CCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC-CC-----CCcccCCcCceE
Q 008927 242 -G--SD---FYAFPRMDP-RGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG-FD-----PTIVESPTEPKW 308 (548)
Q Consensus 242 -~--~~---~~~~p~~SP-DGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~-~~-----~~~~~~~~~~~w 308 (548)
+ .. .-...+++| +|+ |+ ++... ....|++++. +|.+ ...+.. .. ...........+
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~-ly-v~d~~-----~~~~I~~~~~--~g~~--~~~~~~~g~~~~~~~~~~~~p~gia~ 203 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGA-VF-VSDGY-----CNSRIVQFSP--SGKF--VTQWGEESSGSSPRPGQFSVPHSLAL 203 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCC-EE-EEECS-----SCCEEEEECT--TSCE--EEEECEECCSSSCCTTEESCEEEEEE
T ss_pred CCCCccccCCCcEEEEeCCCCe-EE-EEeCC-----CCCeEEEEcC--CCCE--EEEeccCCCCCCCCCcccCCCcEEEE
Confidence 0 11 234568999 555 54 44211 2457888874 3542 222211 00 000012445788
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeE
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVL 338 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~ 338 (548)
+||+..+|++|. +...|.++++++|+..
T Consensus 204 d~~~g~l~v~d~--~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 204 VPHLDQLCVADR--ENGRIQCFKTDTKEFV 231 (329)
T ss_dssp ETTTTEEEEEET--TTTEEEEEETTTCCEE
T ss_pred ECCCCEEEEEEC--CCCEEEEEECCCCcEE
Confidence 999444455554 2346888888766654
No 307
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.21 E-value=0.012 Score=57.67 Aligned_cols=136 Identities=7% Similarity=-0.007 Sum_probs=71.7
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCc---eecCCCCCCCCceecceeeCC--CCCEEEEEEeccCCCCCCceeEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSP---LPITPDYGEPLVSYADGIFDP--RFNRYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~---~~lT~~~~~~~~~~~~~~~Sp--DG~~i~~v~~~~~~~~~~~~~~l 223 (548)
+|+++|..|+- ...|+.|.+.++.. +.. ..+... ...+....|+| +|+.|+....+ ..|
T Consensus 20 ~~s~~g~~las-gs~D~~v~lwd~~~--~~~~~~~~l~gH----~~~V~~v~~~~~~~~~~l~s~s~D---------~~v 83 (316)
T 3bg1_A 20 QMDYYGTRLAT-CSSDRSVKIFDVRN--GGQILIADLRGH----EGPVWQVAWAHPMYGNILASCSYD---------RKV 83 (316)
T ss_dssp EECGGGCEEEE-EETTTEEEEEEEET--TEEEEEEEEECC----SSCEEEEEECCGGGSSCEEEEETT---------SCE
T ss_pred eEcCCCCEEEE-EeCCCeEEEEEecC--CCcEEEEEEcCC----CccEEEEEeCCCCCCCEEEEEECC---------CEE
Confidence 45556665544 33566566556654 322 223322 22455678886 47776655433 247
Q ss_pred EEEECCCCCccCcEEeeecCCceeeeEECCC--CCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCccc
Q 008927 224 VAIALNGQNIQEPKVLVSGSDFYAFPRMDPR--GERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (548)
Q Consensus 224 ~~idl~~g~~~~~~~L~~~~~~~~~p~~SPD--Gk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~ 301 (548)
.++|+.+++......+......+....|+|| |+.|+-... ...|.+.++...+.......+.+.. .
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--------D~~i~lwd~~~~~~~~~~~~~~~h~----~ 151 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS--------DGAISLLTYTGEGQWEVKKINNAHT----I 151 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS--------SSCEEEEEECSSSCEEECCBTTSSS----S
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC--------CCCEEEEecCCCCCcceeeeecccc----C
Confidence 7778887741001222223344667789998 777763331 2457777876432211111122222 3
Q ss_pred CCcCceECcCC
Q 008927 302 SPTEPKWSSKG 312 (548)
Q Consensus 302 ~~~~~~wspDG 312 (548)
.+....|+|++
T Consensus 152 ~v~~~~~~~~~ 162 (316)
T 3bg1_A 152 GCNAVSWAPAV 162 (316)
T ss_dssp CBCCCEECCCC
T ss_pred CcceEEEcccc
Confidence 56778899983
No 308
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=97.20 E-value=9.7e-05 Score=79.10 Aligned_cols=65 Identities=22% Similarity=0.336 Sum_probs=43.4
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCcc-ChHHHHHHh-cCcEEEEeCCC-CCCCCCh
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYG-GSTGLSS 540 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~-~~~~Q~~as-rGyaVl~~NyR-GStGyG~ 540 (548)
+. |...+. +|.|.+. +++++|+||+||||....-.... ....+.|++ +|++|+.+||| |+.||+.
T Consensus 93 ~e-dcl~l~--v~~P~~~-----~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~ 160 (543)
T 2ha2_A 93 SE-DCLYLN--VWTPYPR-----PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLA 160 (543)
T ss_dssp ES-CCCEEE--EEEESSC-----CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCC
T ss_pred CC-cCCeEE--EeecCCC-----CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEeccccccccccc
Confidence 45 776654 4457531 24578999999999864433221 223467776 89999999999 6666653
No 309
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=97.18 E-value=0.00021 Score=71.00 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=40.9
Q ss_pred EEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc-ccCccChHHHHHH-hcCcEEEEeCCCCCCCCC
Q 008927 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE-ARGILNLSIQYWT-SRGWAFVDVNYGGSTGLS 539 (548)
Q Consensus 475 i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~-~~~~~~~~~Q~~a-srGyaVl~~NyRGStGyG 539 (548)
+..++|.|.+ ++.|+||++|||.... ....|....+.|+ ..||.|+.+||||+..+.
T Consensus 84 ~~~~~~~p~~--------~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~ 142 (326)
T 3d7r_A 84 MQVFRFNFRH--------QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH 142 (326)
T ss_dssp EEEEEEESTT--------CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred EEEEEEeeCC--------CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC
Confidence 6678888853 2459999999997533 2223444556676 569999999999988754
No 310
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.15 E-value=0.13 Score=51.00 Aligned_cols=150 Identities=15% Similarity=0.080 Sum_probs=82.5
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
...+.+.++... ++.|++.++.. + ++.+.... .......+++ +.+++..... ...|.++|+.
T Consensus 106 v~~~~~~~~~~~--~~~i~i~d~~~--~-~~~~~~~~----~~~~~~~~s~--~~la~~sg~~-------~g~v~iwd~~ 167 (355)
T 3vu4_A 106 LFLSREFIVVSY--GDVISVFKFGN--P-WKRITDDI----RFGGVCEFSN--GLLVYSNEFN-------LGQIHITKLQ 167 (355)
T ss_dssp EEECSSEEEEEE--TTEEEEEESST--T-CCBSSCCE----EEEEEEEEET--TEEEEEESSC-------TTCEEEEECC
T ss_pred EEEcCCEEEEEE--cCEEEEEECCC--C-ceeeEEec----cCCceEEEEc--cEEEEeCCCc-------CcEEEEEECC
Confidence 334455555555 56788888875 2 23333321 1222334666 5666642222 1357778887
Q ss_pred CCCc-------------cC-cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCce-EEEEEecCCCceeeeEEEc-
Q 008927 230 GQNI-------------QE-PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAE-LWVGYISENGDVYKRVCVA- 293 (548)
Q Consensus 230 ~g~~-------------~~-~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~-L~v~~~~~~g~~~~~~~l~- 293 (548)
++.. .+ .+.+....+.+....|||||+.|+-.+. ... |.+.|+.. ++ ....+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~--------d~~~v~iwd~~~-~~--~~~~~~~ 236 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ--------DGTIIRVFKTED-GV--LVREFRR 236 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEET--------TCSEEEEEETTT-CC--EEEEEEC
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC--------CCCEEEEEECCC-Cc--EEEEEEc
Confidence 6530 00 2333333445677899999998874441 234 88889874 54 233444
Q ss_pred C-CCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCC
Q 008927 294 G-FDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNN 335 (548)
Q Consensus 294 ~-~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g 335 (548)
+ .. ..+....|+|||++++.... ++. |..+++..+
T Consensus 237 g~h~----~~v~~~~~s~~~~~l~s~s~-d~~--v~iw~~~~~ 272 (355)
T 3vu4_A 237 GLDR----ADVVDMKWSTDGSKLAVVSD-KWT--LHVFEIFND 272 (355)
T ss_dssp TTCC----SCEEEEEECTTSCEEEEEET-TCE--EEEEESSCC
T ss_pred CCCC----CcEEEEEECCCCCEEEEEEC-CCE--EEEEEccCC
Confidence 2 22 46788999999995555444 454 444555443
No 311
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=97.12 E-value=0.0012 Score=63.91 Aligned_cols=66 Identities=15% Similarity=0.234 Sum_probs=48.9
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
..+.++|++ +|..+...++.+.. ..+..|+||++||++.... .|....+.|+++||.|+.+|+||.
T Consensus 19 ~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~p~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~ 84 (315)
T 4f0j_A 19 PVHYLDFTS--QGQPLSMAYLDVAP------KKANGRTILLMHGKNFCAG--TWERTIDVLADAGYRVIAVDQVGF 84 (315)
T ss_dssp CCEEEEEEE--TTEEEEEEEEEECC------SSCCSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred cceeEEEec--CCCCeeEEEeecCC------CCCCCCeEEEEcCCCCcch--HHHHHHHHHHHCCCeEEEeecCCC
Confidence 456788877 57776666554421 1234599999999986554 466778899999999999999984
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.068 Score=55.91 Aligned_cols=163 Identities=7% Similarity=0.012 Sum_probs=92.0
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceee-------CCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIF-------DPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~-------SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
++.|+.......+|+++|+++ +..+.|.........+...+.| +++|+.|++. ....... .....++.+
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~--~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyva-d~~~~~~-~~~~~V~~i 226 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKN--RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVA-IDYDGKG-DESPSVYII 226 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTT--TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEE-ECCCTTG-GGEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEECCC--CEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEE-eCCCCCc-ccCceEEEE
Confidence 456777765557899999986 5666554321000113456678 9999976554 4332000 124568888
Q ss_pred ECCC-CCccC---cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecC------CCce-e--------
Q 008927 227 ALNG-QNIQE---PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISE------NGDV-Y-------- 287 (548)
Q Consensus 227 dl~~-g~~~~---~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~------~g~~-~-------- 287 (548)
+.+. |.... .+.+..... -...+++|+++.|++..+ ...+|+.++++. ++.+ +
T Consensus 227 ~r~~~G~~~~~~~~~~v~~~~~-p~giavdp~~g~LYvtd~-------~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 227 KRNADGTFDDRSDIQLIAAYKQ-CNGATIHPINGELYFNSY-------EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp ECCTTSCCSTTSCEEEEEEESC-CCCEEECTTTCCEEEEET-------TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ecCCCCceeecccceeeccCCC-ceEEEEcCCCCeEEEEEC-------CCCEEEEEecccccccccCceeeccccccccc
Confidence 7655 33110 134443322 234578998888876653 245799999871 2332 0
Q ss_pred -eeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc
Q 008927 288 -KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 288 -~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
...+..-.. . .....+.|+|||+.+|++|. +...|++++.+
T Consensus 299 ~~~~l~~~~~-~--~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTIAD-P--SWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEECSS-S--SCCEEEEECTTSSEEEEEET--TTTEEEEEEEE
T ss_pred ccceeEecCC-C--CCceEEEEcCCCCEEEEEeC--CCCEEEEEecC
Confidence 001222111 1 23456899999996667765 44578887653
No 313
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=97.10 E-value=0.00038 Score=63.58 Aligned_cols=56 Identities=16% Similarity=0.177 Sum_probs=44.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccCh--HHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL--SIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~--~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++.+.+.|.+ ++..|+||++||++.... .|.. ..+.|+++||.|+.+|+||.
T Consensus 15 ~g~~l~~~~~~p~~-------~~~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~ 72 (210)
T 1imj_A 15 QGQALFFREALPGS-------GQARFSVLLLHGIRFSSE--TWQNLGTLHRLAQAGYRAVAIDLPGL 72 (210)
T ss_dssp TTEEECEEEEECSS-------SCCSCEEEECCCTTCCHH--HHHHHTHHHHHHHTTCEEEEECCTTS
T ss_pred CCeEEEEEEeCCCC-------CCCCceEEEECCCCCccc--eeecchhHHHHHHCCCeEEEecCCCC
Confidence 89999999998853 335699999999976543 3333 47889999999999999974
No 314
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.09 E-value=0.17 Score=48.13 Aligned_cols=222 Identities=11% Similarity=0.095 Sum_probs=115.3
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
+.|++....++.|++++.++ +.+.+.... .......+.++++|+. ++ .... ...|+++|.+ ++
T Consensus 73 g~l~v~~~~~~~v~~~d~~g---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v-~~~~-------~~~i~~~~~~-g~-- 135 (300)
T 2qc5_A 73 GDIWFTENGANKIGKLSKKG---GFTEYPLPQ--PDSGPYGITEGLNGDI-WF-TQLN-------GDRIGKLTAD-GT-- 135 (300)
T ss_dssp SCEEEEETTTTEEEEECTTS---CEEEEECSS--TTCCEEEEEECSTTCE-EE-EETT-------TTEEEEECTT-SC--
T ss_pred CCEEEEecCCCeEEEECCCC---CeEEecCCC--CCCCCccceECCCCCE-EE-EccC-------CCeEEEECCC-CC--
Confidence 46777776667899999874 333332110 0123456678888873 33 2321 1479999988 55
Q ss_pred CcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 235 EPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 235 ~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
...+.. .........+++||+ | |+... ....|++++.+ +++.. ..+.... .......+++||
T Consensus 136 -~~~~~~~~~~~~~~~i~~d~~g~-l-~v~~~------~~~~i~~~~~~--g~~~~-~~~~~~~----~~~~~i~~d~~g 199 (300)
T 2qc5_A 136 -IYEYDLPNKGSYPAFITLGSDNA-L-WFTEN------QNNSIGRITNT--GKLEE-YPLPTNA----AAPVGITSGNDG 199 (300)
T ss_dssp -EEEEECSSTTCCEEEEEECTTSS-E-EEEET------TTTEEEEECTT--CCEEE-EECSSTT----CCEEEEEECTTS
T ss_pred -EEEccCCCCCCCceeEEECCCCC-E-EEEec------CCCeEEEECCC--CcEEE-eeCCCCC----CCcceEEECCCC
Confidence 443321 122345567899998 4 45422 13578888873 44321 1121111 234566788898
Q ss_pred cEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 313 ~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
+||+.... . ..|++++. +++...+... .....| ....+.+ + +.|++.. .+...|+++|+ +++
T Consensus 200 ~l~v~~~~-~--~~i~~~~~-~g~~~~~~~~-~~~~~~------~~i~~d~---~-g~l~v~~--~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 200 ALWFVEIM-G--NKIGRITT-TGEISEYDIP-TPNARP------HAITAGK---N-SEIWFTE--WGANQIGRITN-DNT 261 (300)
T ss_dssp SEEEEETT-T--TEEEEECT-TCCEEEEECS-STTCCE------EEEEECS---T-TCEEEEE--TTTTEEEEECT-TSC
T ss_pred CEEEEccC-C--CEEEEEcC-CCcEEEEECC-CCCCCc------eEEEECC---C-CCEEEec--cCCCeEEEECC-CCc
Confidence 87765533 2 26888888 5555443211 011111 1123321 3 3465543 23346888888 566
Q ss_pred eEeecCC--CceeEeeeec-CCEEEEEEecCCCCCeEEEEEcC
Q 008927 393 LSLLDIP--FTDIDNITLG-NDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 393 ~~~l~~~--~~~~~~~s~d-~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
.+.+..+ ......+..+ ++.+++.. . . .|+++|++
T Consensus 262 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~-~---~-~i~~~~p~ 299 (300)
T 2qc5_A 262 IQEYQLQTENAEPHGITFGKDGSVWFAL-K---C-KIGKLNLN 299 (300)
T ss_dssp EEEEECCSTTCCCCCEEECTTSCEEEEC-S---S-EEEEEEEC
T ss_pred EEEEECCccCCccceeEeCCCCCEEEEc-c---C-ceEEeCCC
Confidence 5554332 2223333222 34455432 2 2 77777753
No 315
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=97.08 E-value=0.00017 Score=76.85 Aligned_cols=66 Identities=23% Similarity=0.329 Sum_probs=42.9
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc-CccChHHHHH-HhcCcEEEEeCCC-CCCCCCh
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNLSIQYW-TSRGWAFVDVNYG-GSTGLSS 540 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~-~~~~~~~Q~~-asrGyaVl~~NyR-GStGyG~ 540 (548)
+. |. ++.-+|.|.+.. +++++|+||++|||....-. ..++...... +.+|++|+.+||| |..||+.
T Consensus 82 ~e-dc--l~l~v~~P~~~~----~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~ 150 (522)
T 1ukc_A 82 SE-DC--LFINVFKPSTAT----SQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLA 150 (522)
T ss_dssp ES-CC--CEEEEEEETTCC----TTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCC
T ss_pred CC-cC--CEEEEEECCCCC----CCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEeccccccccccc
Confidence 44 66 455677786421 25678999999999875432 2344432222 2569999999999 6656664
No 316
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=97.08 E-value=0.00015 Score=76.75 Aligned_cols=63 Identities=24% Similarity=0.326 Sum_probs=42.8
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-cChHHHHHHhcC-cEEEEeCCC-CCCCCC
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTSRG-WAFVDVNYG-GSTGLS 539 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-~~~~~Q~~asrG-yaVl~~NyR-GStGyG 539 (548)
+. |+..+. +|.|.+ .++++|+||++|||+...-... .....+.|+++| ++|+.+||| |..||+
T Consensus 81 ~e-dcl~l~--v~~P~~------~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~ 146 (498)
T 2ogt_A 81 SE-DGLYLN--IWSPAA------DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFL 146 (498)
T ss_dssp BS-CCCEEE--EEESCS------SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCC
T ss_pred CC-CCcEEE--EEecCC------CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhcc
Confidence 55 776665 456742 2467899999999985432221 123357899887 999999999 444554
No 317
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=97.06 E-value=0.00035 Score=71.19 Aligned_cols=58 Identities=24% Similarity=0.251 Sum_probs=43.3
Q ss_pred CeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 472 GQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 472 G~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
...+++.+..|.. +++++|+||++||+.... ..|....+.|+++||+|+.+|+||..+
T Consensus 81 ~~~~p~~~~~P~~------~~~~~P~Vv~~HG~~~~~--~~~~~~a~~La~~Gy~V~~~d~~g~g~ 138 (383)
T 3d59_A 81 SMTTPANWNSPLR------PGEKYPLVVFSHGLGAFR--TLYSAIGIDLASHGFIVAAVEHRDRSA 138 (383)
T ss_dssp TCEESSEETCCBC------CSSCEEEEEEECCTTCCT--TTTHHHHHHHHHTTCEEEEECCCSSCS
T ss_pred ceeeccccCCCcc------cCCCCCEEEEcCCCCCCc--hHHHHHHHHHHhCceEEEEeccCCCCc
Confidence 3455555555532 246789999999997554 346678899999999999999998754
No 318
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=97.06 E-value=0.00095 Score=68.51 Aligned_cols=65 Identities=20% Similarity=0.162 Sum_probs=47.6
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChH-HHHHHhcCcEEEEeCCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLS-IQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~-~Q~~asrGyaVl~~NyRGSt 536 (548)
..+.++++. +|.++++++++|. +++.|+||++||++..... |... .+.+.++||.|+.+|+||..
T Consensus 134 ~~~~~~i~~--~~~~l~~~~~~~~--------~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~g~~vi~~D~~G~G 199 (405)
T 3fnb_A 134 PLKSIEVPF--EGELLPGYAIISE--------DKAQDTLIVVGGGDTSRED--LFYMLGYSGWEHDYNVLMVDLPGQG 199 (405)
T ss_dssp CCEEEEEEE--TTEEEEEEEECCS--------SSCCCEEEEECCSSCCHHH--HHHHTHHHHHHTTCEEEEECCTTST
T ss_pred CcEEEEEeE--CCeEEEEEEEcCC--------CCCCCEEEEECCCCCCHHH--HHHHHHHHHHhCCcEEEEEcCCCCc
Confidence 467888887 6889999999652 2355999999998554332 2222 23567999999999999853
No 319
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.02 E-value=0.031 Score=53.23 Aligned_cols=192 Identities=9% Similarity=0.024 Sum_probs=107.0
Q ss_pred CceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEECCEEEEEeCCCCeEEEEe
Q 008927 92 GGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIFGDTVIFSNYKDQRLYKHS 171 (548)
Q Consensus 92 ~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~~~~i~F~~~~~~~Ly~~~ 171 (548)
..+.++ ++++|..... .|+ |.+++...+...+++++. ++-|-..++++++||....+++.++++|
T Consensus 58 qGL~~~-~~~Ly~stG~---~g~--v~~iD~~Tgkv~~~~l~~---------~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGH---QGT--LRQLSLESAQPVWMERLG---------NIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEEE-TTEEEEEETT---TTE--EEECCSSCSSCSEEEECT---------TCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred ceEEEE-CCEEEEEcCC---CCE--EEEEECCCCcEEeEECCC---------CcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 345666 7666554432 345 666665532223333221 1112235678889988888889999999
Q ss_pred CCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee--ecCC---c
Q 008927 172 IDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV--SGSD---F 245 (548)
Q Consensus 172 ~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~--~~~~---~ 245 (548)
+++ .+. ..+.... ....+++||++|+. +. . .+.|+.+|.++.+. .+.+. .... +
T Consensus 123 ~~T--l~~~~ti~~~~-------eGwGLt~Dg~~L~v-Sd-G-------s~~l~~iDp~T~~v--~~~I~V~~~g~~v~~ 182 (268)
T 3nok_A 123 GMP--PQRERTTRYSG-------EGWGLCYWNGKLVR-SD-G-------GTMLTFHEPDGFAL--VGAVQVKLRGQPVEL 182 (268)
T ss_dssp TTT--TEEEEEEECSS-------CCCCEEEETTEEEE-EC-S-------SSEEEEECTTTCCE--EEEEECEETTEECCC
T ss_pred CCc--CcEEEEEeCCC-------ceeEEecCCCEEEE-EC-C-------CCEEEEEcCCCCeE--EEEEEeCCCCccccc
Confidence 976 332 3443321 11235578987644 33 2 25899999999863 23332 2211 1
Q ss_pred eeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC---------CCCCcccCCcCceECcCCcEEE
Q 008927 246 YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG---------FDPTIVESPTEPKWSSKGELFF 316 (548)
Q Consensus 246 ~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~---------~~~~~~~~~~~~~wspDG~L~~ 316 (548)
.....|. ||+ | |+.. |....|.++|.+ +|++.....+.+ .+.. .-....+|+|+++.+|
T Consensus 183 lNeLe~~-dG~-l-yanv------w~s~~I~vIDp~-TG~V~~~Idl~~L~~~~~~~~~~~~--~vlNGIA~dp~~~rlf 250 (268)
T 3nok_A 183 INELECA-NGV-I-YANI------WHSSDVLEIDPA-TGTVVGVIDASALTRAVAGQVTNPE--AVLNGIAVEPGSGRIF 250 (268)
T ss_dssp EEEEEEE-TTE-E-EEEE------TTCSEEEEECTT-TCBEEEEEECHHHHHHHTTTCCCTT--CCEEEEEECTTTCCEE
T ss_pred ccccEEe-CCE-E-EEEE------CCCCeEEEEeCC-CCcEEEEEECCCCcccccccccCcC--CceEEEEEcCCCCEEE
Confidence 2233455 774 4 4441 345689999988 466433333321 0100 1235689999988556
Q ss_pred EEeCCCCeeeEEEEec
Q 008927 317 VTDRKNGFWNLHKWIE 332 (548)
Q Consensus 317 ~sd~~~g~~~Ly~~d~ 332 (548)
++.+ -|..||.+.+
T Consensus 251 VTGK--~Wp~~~ev~~ 264 (268)
T 3nok_A 251 MTGK--LWPRLFEVRL 264 (268)
T ss_dssp EEET--TCSEEEEEEE
T ss_pred EeCC--CCCceEEEEE
Confidence 6654 5677887754
No 320
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.02 E-value=0.014 Score=58.96 Aligned_cols=75 Identities=12% Similarity=-0.045 Sum_probs=44.3
Q ss_pred ceECcCCc-EEEEEeCCC-C-----eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC
Q 008927 306 PKWSSKGE-LFFVTDRKN-G-----FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (548)
Q Consensus 306 ~~wspDG~-L~~~sd~~~-g-----~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~ 378 (548)
..++|||+ +|+.... . + ...+..+|++++++..-.+.. ...| .+.+.+ |+++++++.. .
T Consensus 269 v~~s~dg~~lyV~~~~-~~~~~~~~~~~~~ViD~~t~~vv~~i~vg----~~p~-----gi~~s~---Dg~~l~va~~-~ 334 (368)
T 1mda_H 269 VAKLKNTDGIMILTVE-HSRSCLAAAENTSSVTASVGQTSGPISNG----HDSD-----AIIAAQ---DGASDNYANS-A 334 (368)
T ss_dssp EEEETTTTEEEEEEEE-CSSCTTSCEEEEEEEESSSCCEEECCEEE----EEEC-----EEEECC---SSSCEEEEEE-T
T ss_pred eEEcCCCCEEEEEecc-ccCcccccCCCEEEEECCCCeEEEEEECC----CCcc-----eEEECC---CCCEEEEEcc-C
Confidence 57999999 6655442 2 2 234559999888754322211 1111 244554 7777776554 2
Q ss_pred CeEEEEEEECCCCceE
Q 008927 379 GRSYLGILDDFGHSLS 394 (548)
Q Consensus 379 g~~~L~~~dl~~g~~~ 394 (548)
+...|.++|++++++.
T Consensus 335 ~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 335 GTEVLDIYDAASDQDQ 350 (368)
T ss_dssp TTTEEEEEESSSCEEE
T ss_pred CCCeEEEEECCCCcEE
Confidence 3456889999988754
No 321
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=97.02 E-value=0.00047 Score=65.75 Aligned_cols=59 Identities=14% Similarity=0.272 Sum_probs=43.5
Q ss_pred EEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChh
Q 008927 477 AYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSV 541 (548)
Q Consensus 477 g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~ 541 (548)
+.+|.|.+.. ..+++.|+||++||++... ..|....+.|+++||.|+.+|+||| +...+
T Consensus 34 ~~~~~p~~~~---~~g~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~~s-~~~~~ 92 (258)
T 2fx5_A 34 CRIYRPRDLG---QGGVRHPVILWGNGTGAGP--STYAGLLSHWASHGFVVAAAETSNA-GTGRE 92 (258)
T ss_dssp EEEEEESSTT---GGGCCEEEEEEECCTTCCG--GGGHHHHHHHHHHTCEEEEECCSCC-TTSHH
T ss_pred EEEEeCCCCc---ccCCCceEEEEECCCCCCc--hhHHHHHHHHHhCCeEEEEecCCCC-ccHHH
Confidence 7788886411 0133789999999998643 3566778899999999999999986 44444
No 322
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=97.01 E-value=0.093 Score=57.68 Aligned_cols=289 Identities=9% Similarity=0.011 Sum_probs=154.4
Q ss_pred CCCCCcCCHHHHhcC-C--CccCceE-EcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCC--ccc---cc
Q 008927 73 GSWKSPLTADVVSGA-S--KRLGGTA-VDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYA--VRT---TA 142 (548)
Q Consensus 73 g~w~spit~~~l~~~-~--~~~~~~~-~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~--~r~---~v 142 (548)
+.|.--|.++.|... . -.+.... ++| |+++++--++.. .....+...+.. .+++.++++. +.+ .-
T Consensus 110 p~wevllD~d~l~~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G-~d~~~~~~~d~~----t~~~~~~~~~~~~k~~~~~~ 184 (711)
T 4hvt_A 110 PNWEVLIDFDKLSKKIGKKVAYRGVSNCFQNPNRYLISMSFGG-KDEMFFREWDLE----KKDFVKNGFEPITNSGKLLE 184 (711)
T ss_dssp CCCEEEEEHHHHHHHHTSCEEEEEEEECSSSTTEEEEEEEETT-CSEEEEEEEETT----TTEECTTCSCCBCTTCCBCC
T ss_pred CCcEEEeccccccccCCCcEEEeceeecCCCCCEEEEEeCCCC-CceeEEEEEECC----cCCcCCCCcccccccccccc
Confidence 467777889999865 3 3567777 788 888777654421 223445555443 3344444433 111 00
Q ss_pred eeeCCeeeEEECCEEEEEeC-C---------CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCE---EEEEE
Q 008927 143 QEYGGGAFRIFGDTVIFSNY-K---------DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNR---YVTVR 209 (548)
Q Consensus 143 ~~ygg~~~~~~~~~i~F~~~-~---------~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~---i~~v~ 209 (548)
..|++.+|. |++.++|..+ . ..++|+..+.+...+.+.|-.... ... +.....++|++. ++++.
T Consensus 185 ~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~ 261 (711)
T 4hvt_A 185 GKFTYPTWI-NKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPK-EYI-YVSAGKLLSDTISSSLIFIS 261 (711)
T ss_dssp EETCCEEEE-ETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCT-TSC-EEEEEESSCTTTCSSEEEEE
T ss_pred cccceeeEE-CCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCC-Cce-EEEEEEecCCCceEEEEEEE
Confidence 012334775 8888888632 1 136888887542123344433321 122 334557778774 23443
Q ss_pred eccCCCCCCceeEEEEEECCC--CCccCcEEeeecCCceeeeEECCCCCEEEEEE--ecCCCCCCCCceEEEEEecCC--
Q 008927 210 EDRRQDALNSTTEIVAIALNG--QNIQEPKVLVSGSDFYAFPRMDPRGERMAWIE--WHHPNMPWDKAELWVGYISEN-- 283 (548)
Q Consensus 210 ~~~~~~~~~~~~~l~~idl~~--g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~--~~~~~~p~~~~~L~v~~~~~~-- 283 (548)
.... ...+++|.++++. ++ ...|....+. .+..+++|+.++++. |...+.......|++++++..
T Consensus 262 ~~~~----~~~~~~~~~~~~~~~~~---~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 332 (711)
T 4hvt_A 262 ANKD----FYNYDNYILDTKYKNLK---LQKINMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLK 332 (711)
T ss_dssp EESS----SSCEEEEEEECSSSSCE---EEECCSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGS
T ss_pred Eecc----cCceeEEEEcCCCCCCc---ceEeecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccc
Confidence 2211 1347899999875 33 4555433332 234566665443332 211100012567999999741
Q ss_pred C---ceeeeE-EEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCe--eEe-ec-ccccccCCCccccc
Q 008927 284 G---DVYKRV-CVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNE--VLA-IY-SLDAEFSRPLWVFG 355 (548)
Q Consensus 284 g---~~~~~~-~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~--~~~-l~-~~~~d~~~p~w~~~ 355 (548)
| + .+.+ +++... + ..+..+.|..| .|++.... .+...|+++++.+|+ .+. +. +....+.
T Consensus 333 ~~~~~-~~~~~~~~~~~-~--~~l~~~~~~~~-~l~~~~~~-~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~------- 399 (711)
T 4hvt_A 333 TESDK-TSLKILFTPTA-N--EVFNFISTTKD-RVFLATYD-NVVAKVVTFTLENEQWTKPVVLKLPYQNAIF------- 399 (711)
T ss_dssp CGGGC-TTCEEEECCCT-T--EEEEEEEECSS-CEEEEEEE-TTEEEEEEECEETTEECCCEEECCCSTTCEE-------
T ss_pred ccccc-ccceEEECCCC-C--CeEEEEEEECC-EEEEEEEE-CCEEEEEEEECCCCceEEEeccCCCCCeEEE-------
Confidence 1 1 1222 354433 2 56677888876 47776665 788899999987775 344 32 1111000
Q ss_pred CcceeeeeecCCCCEEEEEEEe-CCeEEEEEEECCCCceEeec
Q 008927 356 INSYEIIQSHGEKNLIACSYRQ-NGRSYLGILDDFGHSLSLLD 397 (548)
Q Consensus 356 ~~~~~~~~~~~d~~~l~~~~~~-~g~~~L~~~dl~~g~~~~l~ 397 (548)
.....+ +++.+++.... .....+|.+|+. ++.+.|.
T Consensus 400 --~~~~~~---~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~ 436 (711)
T 4hvt_A 400 --GMSSYE---EEEEALITIENSIVPPTIYLWVKT-HELKIIR 436 (711)
T ss_dssp --EEECCT---TCSCEEEEEECSSSCCEEEEECTT-SCEEEEE
T ss_pred --EEeecC---cCCEEEEEEecCCCCCEEEEEeCC-CcEEEEe
Confidence 011111 56667766653 356689999987 7776665
No 323
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=96.98 E-value=0.00031 Score=72.22 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=51.6
Q ss_pred ccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcE----EEEeCCC
Q 008927 458 FSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWA----FVDVNYG 533 (548)
Q Consensus 458 ~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGya----Vl~~NyR 533 (548)
..+.+.++|.|...|.++..++|.|.+ ++ ++++|+|+++||+-+... ..+....+.|+++|++ |+.+|++
T Consensus 165 ~G~v~~~~~~S~~~g~~~~~~vy~P~~--~~---~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~ 238 (403)
T 3c8d_A 165 EIPAKEIIWKSERLKNSRRVWIFTTGD--VT---AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAI 238 (403)
T ss_dssp SSCCEEEEEEETTTTEEEEEEEEEC----------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCC
T ss_pred CCceEEEEEEccccCCcEEEEEEeCCC--CC---CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCC
Confidence 345678888875467889999999964 42 578999999999643322 1233457889999986 9999998
Q ss_pred CCC
Q 008927 534 GST 536 (548)
Q Consensus 534 GSt 536 (548)
|+.
T Consensus 239 ~~~ 241 (403)
T 3c8d_A 239 DTT 241 (403)
T ss_dssp SHH
T ss_pred CCc
Confidence 743
No 324
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=96.96 E-value=0.00032 Score=67.43 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=36.4
Q ss_pred CCCCcEEEEEccCcccc---ccCccChHHHHH----HhcCcEEEEeCCCCCCCC
Q 008927 492 EEKPPLLVKSHGGPTSE---ARGILNLSIQYW----TSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 492 ~~~~Pliv~iHGGP~~~---~~~~~~~~~Q~~----asrGyaVl~~NyRGStGy 538 (548)
+++.|+||++|||+... ....|....+.| +++||.|+.+|||++...
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~ 91 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI 91 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC
Confidence 45679999999998543 333455667778 689999999999998754
No 325
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.96 E-value=0.36 Score=49.16 Aligned_cols=227 Identities=11% Similarity=0.084 Sum_probs=119.4
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIA 227 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~id 227 (548)
++.++++.|+.. ..++.|.+.++.. ++.. .+... ...+..+.| |++.|+....+ ..|.++|
T Consensus 138 ~~~~d~~~l~~g-~~dg~i~iwd~~~--~~~~~~~~~h----~~~v~~l~~--~~~~l~sg~~d---------g~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSG-LRDNTIKIWDKNT--LECKRILTGH----TGSVLCLQY--DERVIITGSSD---------STVRVWD 199 (435)
T ss_dssp EEECCSSEEEEE-ESSSCEEEEESSS--CCEEEEECCC----SSCEEEEEC--CSSEEEEEETT---------SCEEEEE
T ss_pred EEEECCCEEEEE-eCCCeEEEEeCCC--CeEEEEEcCC----CCcEEEEEE--CCCEEEEEcCC---------CeEEEEE
Confidence 344455555544 3567788888876 4443 33332 123444444 78876665433 3588889
Q ss_pred CCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCce
Q 008927 228 LNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPK 307 (548)
Q Consensus 228 l~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~ 307 (548)
+.+++. ...+......+....|+ +..|+-.. . ...|.+.++...........+.+.. ..+....
T Consensus 200 ~~~~~~--~~~~~~h~~~v~~l~~~--~~~l~s~s-~-------dg~i~vwd~~~~~~~~~~~~~~~~~----~~v~~~~ 263 (435)
T 1p22_A 200 VNTGEM--LNTLIHHCEAVLHLRFN--NGMMVTCS-K-------DRSIAVWDMASPTDITLRRVLVGHR----AAVNVVD 263 (435)
T ss_dssp SSSCCE--EEEECCCCSCEEEEECC--TTEEEEEE-T-------TSCEEEEECSSSSCCEEEEEECCCS----SCEEEEE
T ss_pred CCCCcE--EEEEcCCCCcEEEEEEc--CCEEEEee-C-------CCcEEEEeCCCCCCceeeeEecCCC----CcEEEEE
Confidence 998872 23333333445555665 44555333 1 3468888987533221123344432 3455566
Q ss_pred ECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEE
Q 008927 308 WSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILD 387 (548)
Q Consensus 308 wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~d 387 (548)
| ||++++.... +| .|..+|+.+++....... .... .....+ +++.|+ +...++ .|.++|
T Consensus 264 ~--~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~-----~~~~---v~~~~~-----~~~~l~-~g~~dg--~i~iwd 322 (435)
T 1p22_A 264 F--DDKYIVSASG-DR--TIKVWNTSTCEFVRTLNG-----HKRG---IACLQY-----RDRLVV-SGSSDN--TIRLWD 322 (435)
T ss_dssp E--ETTEEEEEET-TS--EEEEEETTTCCEEEEEEC-----CSSC---EEEEEE-----ETTEEE-EEETTS--CEEEEE
T ss_pred e--CCCEEEEEeC-CC--eEEEEECCcCcEEEEEcC-----CCCc---EEEEEe-----CCCEEE-EEeCCC--eEEEEE
Confidence 6 7775555444 34 567778777765332211 0011 111233 345443 444444 466778
Q ss_pred CCCCceE-eecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 388 DFGHSLS-LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 388 l~~g~~~-~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
+.+++.. .+......+..+..+++.++ +++. ...|.++|+.++
T Consensus 323 ~~~~~~~~~~~~h~~~v~~~~~~~~~l~-sg~~---dg~i~vwd~~~~ 366 (435)
T 1p22_A 323 IECGACLRVLEGHEELVRCIRFDNKRIV-SGAY---DGKIKVWDLVAA 366 (435)
T ss_dssp TTTCCEEEEECCCSSCEEEEECCSSEEE-EEET---TSCEEEEEHHHH
T ss_pred CCCCCEEEEEeCCcCcEEEEEecCCEEE-EEeC---CCcEEEEECCCC
Confidence 8877643 44433334555555666544 3332 256888887543
No 326
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=96.95 E-value=0.00083 Score=74.82 Aligned_cols=22 Identities=27% Similarity=0.403 Sum_probs=19.1
Q ss_pred HHHHHHhcCcEEEEeCCCCCCC
Q 008927 516 SIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 516 ~~Q~~asrGyaVl~~NyRGStG 537 (548)
..++|+++||+|+.+|+||+.+
T Consensus 273 ~~~~la~~GYaVv~~D~RG~G~ 294 (763)
T 1lns_A 273 LNDYFLTRGFASIYVAGVGTRS 294 (763)
T ss_dssp HHHHHHTTTCEEEEECCTTSTT
T ss_pred hHHHHHHCCCEEEEECCCcCCC
Confidence 3599999999999999999543
No 327
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.93 E-value=0.0099 Score=58.27 Aligned_cols=247 Identities=11% Similarity=-0.003 Sum_probs=118.8
Q ss_pred CccCceEEcC-CCcEEEEEecCCCCCceEEEEcCCCCCCCC---cccCCCCCCccccceeeCCeeeEEE-CCEEEEEeCC
Q 008927 89 KRLGGTAVDG-HGRLIWLESRPTEAGRGVLVKEPAKAGDEP---SDITPKEYAVRTTAQEYGGGAFRIF-GDTVIFSNYK 163 (548)
Q Consensus 89 ~~~~~~~~sp-g~~i~~~~~~~~e~gr~~l~~~~~~~~~~~---~~lt~~~~~~r~~v~~ygg~~~~~~-~~~i~F~~~~ 163 (548)
..+..++++| |+.++--. .++...||..... .. ..+....-.+. .-.|+++ ++.++.+...
T Consensus 14 ~~V~~v~~s~~g~~lasgs----~D~~v~lwd~~~~---~~~~~~~l~gH~~~V~-------~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCS----SDRSVKIFDVRNG---GQILIADLRGHEGPVW-------QVAWAHPMYGNILASCSY 79 (316)
T ss_dssp CCEEEEEECGGGCEEEEEE----TTTEEEEEEEETT---EEEEEEEEECCSSCEE-------EEEECCGGGSSCEEEEET
T ss_pred CeEEEeeEcCCCCEEEEEe----CCCeEEEEEecCC---CcEEEEEEcCCCccEE-------EEEeCCCCCCCEEEEEEC
Confidence 4567788888 77654432 2466677765332 11 11211111111 1134432 2334445556
Q ss_pred CCeEEEEeCCCCCCCce---ecCCCCCCCCceecceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE
Q 008927 164 DQRLYKHSIDSKDSSPL---PITPDYGEPLVSYADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~~~---~lT~~~~~~~~~~~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~ 238 (548)
|+.|.+-++.. ++.+ .+... ...+....|+|+ |..|+....+ ..|.++|+.++.. ...
T Consensus 80 D~~v~iWd~~~--~~~~~~~~~~~h----~~~V~~v~~~p~~~g~~lasgs~D---------~~i~lwd~~~~~~--~~~ 142 (316)
T 3bg1_A 80 DRKVIIWREEN--GTWEKSHEHAGH----DSSVNSVCWAPHDYGLILACGSSD---------GAISLLTYTGEGQ--WEV 142 (316)
T ss_dssp TSCEEEECCSS--SCCCEEEEECCC----SSCCCEEEECCTTTCSCEEEECSS---------SCEEEEEECSSSC--EEE
T ss_pred CCEEEEEECCC--CcceEEEEccCC----CCceEEEEECCCCCCcEEEEEcCC---------CCEEEEecCCCCC--cce
Confidence 67677777765 4322 22222 224567789998 6666554333 2466667766530 111
Q ss_pred ee--e-cCCceeeeEECCCC-----------------CEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCC
Q 008927 239 LV--S-GSDFYAFPRMDPRG-----------------ERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 298 (548)
Q Consensus 239 L~--~-~~~~~~~p~~SPDG-----------------k~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~ 298 (548)
+. . .........|+|++ +.|+ .. . ....|.+.++...+.......+.+..
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg-s------~D~~v~lWd~~~~~~~~~~~~l~~h~-- 212 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFA-SG-G------CDNLIKLWKEEEDGQWKEEQKLEAHS-- 212 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEE-CC-B------TTSBCCEEEECTTSCEEEEECCBCCS--
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEE-Ee-c------CCCeEEEEEeCCCCccceeeecccCC--
Confidence 11 1 12224456788883 4444 21 1 12345566665333221222233332
Q ss_pred cccCCcCceECcCC----cEEEEEeCCCCeeeEEEEeccCC---ee--EeecccccccCCCcccccCcceeeeeecCCCC
Q 008927 299 IVESPTEPKWSSKG----ELFFVTDRKNGFWNLHKWIESNN---EV--LAIYSLDAEFSRPLWVFGINSYEIIQSHGEKN 369 (548)
Q Consensus 299 ~~~~~~~~~wspDG----~L~~~sd~~~g~~~Ly~~d~~~g---~~--~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~ 369 (548)
..+....|+||+ ++++.... ++.-.|| ++++. +. +.+. .+..+.| ...|.| +++
T Consensus 213 --~~V~~v~~sp~~~~~~~~las~s~-D~~v~iw--~~~~~~~~~~~~~~~~----~~~~~v~-----~v~~sp---~g~ 275 (316)
T 3bg1_A 213 --DWVRDVAWAPSIGLPTSTIASCSQ-DGRVFIW--TCDDASSNTWSPKLLH----KFNDVVW-----HVSWSI---TAN 275 (316)
T ss_dssp --SCEEEEECCCCSSCSCCEEEEEET-TCEEEEE--ECSSTTCCCCBCCEEE----ECSSCEE-----EEEECT---TTC
T ss_pred --CceEEEEecCCCCCCCceEEEEcC-CCeEEEE--EccCccccchhhhhhh----cCCCcEE-----EEEEcC---CCC
Confidence 457788999997 55555544 5554454 44432 11 1121 1111222 245654 555
Q ss_pred EEEEEEEeCCeEEEEEEECCCCceEe
Q 008927 370 LIACSYRQNGRSYLGILDDFGHSLSL 395 (548)
Q Consensus 370 ~l~~~~~~~g~~~L~~~dl~~g~~~~ 395 (548)
.| ++...++.-+||..+.+ |+++.
T Consensus 276 ~l-as~~~D~~v~lw~~~~~-g~~~~ 299 (316)
T 3bg1_A 276 IL-AVSGGDNKVTLWKESVD-GQWVC 299 (316)
T ss_dssp CE-EEEESSSCEEEEEECTT-SCEEE
T ss_pred EE-EEEcCCCeEEEEEECCC-CcEEE
Confidence 44 45566777777766543 44443
No 328
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.92 E-value=0.059 Score=51.44 Aligned_cols=144 Identities=10% Similarity=0.095 Sum_probs=78.7
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQE 235 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~ 235 (548)
.|++....++.|++++.++ ...+.+.... .......+.++|||+ | ++.... ...|+++|.++..
T Consensus 133 ~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~--~~~~p~~i~~~~~g~-l-~v~~~~-------~~~i~~~~~~g~~--- 196 (286)
T 1q7f_A 133 RIIVVECKVMRVIIFDQNG--NVLHKFGCSK--HLEFPNGVVVNDKQE-I-FISDNR-------AHCVKVFNYEGQY--- 196 (286)
T ss_dssp CEEEEETTTTEEEEECTTS--CEEEEEECTT--TCSSEEEEEECSSSE-E-EEEEGG-------GTEEEEEETTCCE---
T ss_pred CEEEEECCCCEEEEEcCCC--CEEEEeCCCC--ccCCcEEEEECCCCC-E-EEEECC-------CCEEEEEcCCCCE---
Confidence 5777776677899999765 3333332110 011244678999987 3 333321 2479999986654
Q ss_pred cEEeeecC--CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc
Q 008927 236 PKVLVSGS--DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE 313 (548)
Q Consensus 236 ~~~L~~~~--~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~ 313 (548)
...+.... .......++|||+ | |++... .+..|.+++.+ |+. ...+...... .....+.++|||+
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~G~-l-~v~~~~-----~~~~i~~~~~~--g~~--~~~~~~~~~~--~~~~~i~~~~~g~ 263 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSNGE-I-LIADNH-----NNFNLTIFTQD--GQL--ISALESKVKH--AQCFDVALMDDGS 263 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTTCC-E-EEEECS-----SSCEEEEECTT--SCE--EEEEEESSCC--SCEEEEEEETTTE
T ss_pred EEEEccCCccCCCcEEEECCCCC-E-EEEeCC-----CCEEEEEECCC--CCE--EEEEcccCCC--CcceeEEECCCCc
Confidence 44443221 2344568999996 4 344211 11378888854 432 2222221101 2244678999998
Q ss_pred EEEEEeCCCCeeeEEEE
Q 008927 314 LFFVTDRKNGFWNLHKW 330 (548)
Q Consensus 314 L~~~sd~~~g~~~Ly~~ 330 (548)
||+. +. ++.-.+|.+
T Consensus 264 l~vs-~~-~~~v~v~~~ 278 (286)
T 1q7f_A 264 VVLA-SK-DYRLYIYRY 278 (286)
T ss_dssp EEEE-ET-TTEEEEEEC
T ss_pred EEEE-CC-CCeEEEEEc
Confidence 6665 55 554444443
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.91 E-value=0.03 Score=55.87 Aligned_cols=166 Identities=16% Similarity=0.091 Sum_probs=77.9
Q ss_pred CHHHHhcCCCccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccC--CCCCCccccceeeC--CeeeEEE--
Q 008927 80 TADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDIT--PKEYAVRTTAQEYG--GGAFRIF-- 153 (548)
Q Consensus 80 t~~~l~~~~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt--~~~~~~r~~v~~yg--g~~~~~~-- 153 (548)
+++.+...-.....+.+.|++++|..|.. .|+ |++++.++ +....+. +.-+ .. . +.| |-++.|+
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~---~G~--I~~v~~~~-g~~~~v~~~~~v~-~~-g--~~GllGia~~Pdf~ 92 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRD---EAT--ITRVDAKT-GRKTELGEVPGVS-PS-G--EGGLLGIALSPDYA 92 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETT---TCE--EEEECTTT-CCEEEEEECTTCC-CB-T--TBSEEEEEECTTHH
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEec---CCE--EEEEECCC-CcEeeecccCcee-ec-C--CCCceeeEeccccc
Confidence 34444443245567788885567776631 354 55554432 2333221 1100 00 0 111 1233332
Q ss_pred -CCEEEEE--eCCCCeEEEEeCCCCC------CCceecCC-CCCCCCceecceeeCCCCCEEEEEEeccCC-----CCCC
Q 008927 154 -GDTVIFS--NYKDQRLYKHSIDSKD------SSPLPITP-DYGEPLVSYADGIFDPRFNRYVTVREDRRQ-----DALN 218 (548)
Q Consensus 154 -~~~i~F~--~~~~~~Ly~~~~~~~~------~~~~~lT~-~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~-----~~~~ 218 (548)
++.||+. .....+|+++.+++++ .+++.|.. ......-.-..+.|+|||. |++...+... ....
T Consensus 93 ~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~ 171 (347)
T 3das_A 93 SDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKS 171 (347)
T ss_dssp HHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTC
T ss_pred cCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCC
Confidence 4555543 3345689999887511 12232211 1100011123578999996 4333222110 1112
Q ss_pred ceeEEEEEECCCCCcc-----CcEEeeecCCceeeeEECCCCC
Q 008927 219 STTEIVAIALNGQNIQ-----EPKVLVSGSDFYAFPRMDPRGE 256 (548)
Q Consensus 219 ~~~~l~~idl~~g~~~-----~~~~L~~~~~~~~~p~~SPDGk 256 (548)
....|++++.++.-.. ..+++..+...-...+|+|+|+
T Consensus 172 ~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~ 214 (347)
T 3das_A 172 LGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR 214 (347)
T ss_dssp STTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC
T ss_pred CCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC
Confidence 3568999999876100 0345555544444567888876
No 330
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.87 E-value=0.04 Score=54.04 Aligned_cols=166 Identities=8% Similarity=0.011 Sum_probs=89.5
Q ss_pred CCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCC-CceecceeeCC-CCCEEEEEEeccCC-CC---------CCcee
Q 008927 154 GDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEP-LVSYADGIFDP-RFNRYVTVREDRRQ-DA---------LNSTT 221 (548)
Q Consensus 154 ~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~-~~~~~~~~~Sp-DG~~i~~v~~~~~~-~~---------~~~~~ 221 (548)
++.|+..+.. ..|++++.++ ++.+.+....... .....++.++| +|. |++. ..... .. .....
T Consensus 91 ~g~l~v~d~~-~~i~~~d~~~--g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~-d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 91 NNQLYIVDCY-YHLSVVGSEG--GHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFT-DVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp TTEEEEEETT-TEEEEECTTC--EECEEEESEETTEECSCEEEEEECTTTCC-EEEE-ESCSSCCTTCHHHHHHHTCCCE
T ss_pred CCcEEEEECC-CCEEEEeCCC--CEEEEecccCCCCcccccceEEEecCCCE-EEEE-CCcccccccccceehcccCCCc
Confidence 4577776533 4599998876 5555543211000 11245678999 886 4443 32100 00 01236
Q ss_pred EEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCccc
Q 008927 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (548)
Q Consensus 222 ~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~ 301 (548)
.|+++|.++++ .+.+..+...-....|+|||+.|++... ....|++++++. +.......+.... .
T Consensus 166 ~v~~~d~~~~~---~~~~~~~~~~p~gia~~~dg~~lyv~d~-------~~~~I~~~~~~~-~~~~~~~~~~~~~----g 230 (322)
T 2fp8_A 166 RLIKYDPSTKE---TTLLLKELHVPGGAEVSADSSFVLVAEF-------LSHQIVKYWLEG-PKKGTAEVLVKIP----N 230 (322)
T ss_dssp EEEEEETTTTE---EEEEEEEESCCCEEEECTTSSEEEEEEG-------GGTEEEEEESSS-TTTTCEEEEEECS----S
T ss_pred eEEEEeCCCCE---EEEeccCCccCcceEECCCCCEEEEEeC-------CCCeEEEEECCC-CcCCccceEEeCC----C
Confidence 79999998887 5555433222334589999997754432 135799999873 2111122222111 2
Q ss_pred CCcCceECcCCcEEEEEeCC-C-----C-eeeEEEEeccCCeeEee
Q 008927 302 SPTEPKWSSKGELFFVTDRK-N-----G-FWNLHKWIESNNEVLAI 340 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~-~-----g-~~~Ly~~d~~~g~~~~l 340 (548)
......++||+||+..... . + ...|++++.++...+.+
T Consensus 231 -P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 231 -PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp -EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred -CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEE
Confidence 3345778899865553220 1 1 35699999854333333
No 331
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=96.86 E-value=0.00072 Score=67.03 Aligned_cols=47 Identities=9% Similarity=0.051 Sum_probs=33.6
Q ss_pred CCCcEEEEEccCcccc-ccCccChHHHHHHhc-CcEEEEeCCCCCCCCC
Q 008927 493 EKPPLLVKSHGGPTSE-ARGILNLSIQYWTSR-GWAFVDVNYGGSTGLS 539 (548)
Q Consensus 493 ~~~Pliv~iHGGP~~~-~~~~~~~~~Q~~asr-GyaVl~~NyRGStGyG 539 (548)
.++|+||++|||.... ....+......|+.+ ||+|+.+||||+....
T Consensus 78 ~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 126 (322)
T 3k6k_A 78 AGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP 126 (322)
T ss_dssp CCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC
T ss_pred CCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC
Confidence 4556699999997432 223344556677765 9999999999987653
No 332
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=96.85 E-value=0.0013 Score=62.73 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=49.6
Q ss_pred eEEEeecc-CCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCCCh
Q 008927 462 ELIEFPTE-VPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSS 540 (548)
Q Consensus 462 e~i~~~s~-~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~ 540 (548)
+.+++++. ++|.. .+.||.|... +.++.|+||++||+..... .|....+.|+++||.|+.+|+||......
T Consensus 26 ~~~~~~~~~~~~~~-~~~l~~p~~~-----~~~~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~~~~ 97 (262)
T 1jfr_A 26 SQTSVSSLVASGFG-GGTIYYPTST-----ADGTFGAVVISPGFTAYQS--SIAWLGPRLASQGFVVFTIDTNTTLDQPD 97 (262)
T ss_dssp EEEEECTTTCSSSC-CEEEEEESCC-----TTCCEEEEEEECCTTCCGG--GTTTHHHHHHTTTCEEEEECCSSTTCCHH
T ss_pred cceEecceeccCCC-ceeEEecCCC-----CCCCCCEEEEeCCcCCCch--hHHHHHHHHHhCCCEEEEeCCCCCCCCCc
Confidence 44555543 23332 5677778531 1346799999999875443 56677889999999999999998766543
No 333
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.13 Score=50.38 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=60.0
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCC
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPW 270 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~ 270 (548)
+..+.|+|+ .|+....+ ..|.++|+.++.......+.. ..+.+....|+|||+.|+-.+.
T Consensus 17 v~~~~~s~~--~las~~~D---------~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~------- 78 (330)
T 2hes_X 17 IWSFDFSQG--ILATGSTD---------RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF------- 78 (330)
T ss_dssp EEEEEEETT--EEEEEESS---------SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-------
T ss_pred eeeeccCCC--EEEEEcCC---------CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-------
Confidence 455678887 44443322 247777887754100122312 2334667889999998874442
Q ss_pred CCceEEEEEecCCC----ceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEec
Q 008927 271 DKAELWVGYISENG----DVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (548)
Q Consensus 271 ~~~~L~v~~~~~~g----~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~ 332 (548)
...|.+.+++... .......+.+.. ..+....|+|||++++.... ++. |..+|+
T Consensus 79 -D~~v~iw~~~~~~~~~~~~~~~~~~~~h~----~~V~~v~~sp~g~~las~s~-D~~--v~iwd~ 136 (330)
T 2hes_X 79 -DSTVSIWAKEESADRTFEMDLLAIIEGHE----NEVKGVAWSNDGYYLATCSR-DKS--VWIWET 136 (330)
T ss_dssp -TSCEEEEEC-------CCCEEEEEEC--------CEEEEEECTTSCEEEEEET-TSC--EEEEEC
T ss_pred -CCcEEEEEcccCcCccccceeEEEEcCCC----CcEEEEEECCCCCEEEEEeC-CCE--EEEEec
Confidence 2346666764211 111123344433 45778999999995555544 454 444554
No 334
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.80 E-value=0.56 Score=47.76 Aligned_cols=227 Identities=11% Similarity=0.099 Sum_probs=114.9
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
..++++.|+.. ..++.|.+.++.. ++.. .+... ......+.+ +|+.|+....+ ..|.++|+
T Consensus 205 ~~~~~~~l~s~-s~dg~i~~wd~~~--~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~~d---------g~i~iwd~ 266 (445)
T 2ovr_B 205 MHLHEKRVVSG-SRDATLRVWDIET--GQCLHVLMGH----VAAVRCVQY--DGRRVVSGAYD---------FMVKVWDP 266 (445)
T ss_dssp EEEETTEEEEE-ETTSEEEEEESSS--CCEEEEEECC----SSCEEEEEE--CSSCEEEEETT---------SCEEEEEG
T ss_pred EEecCCEEEEE-eCCCEEEEEECCC--CcEEEEEcCC----cccEEEEEE--CCCEEEEEcCC---------CEEEEEEC
Confidence 44566665443 4677888888876 4433 33222 122334445 77776665333 35888898
Q ss_pred CCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 229 NGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
.+++. ...+...........| ||+.|+.... ...|.+.|+.. ++ ....+.+.. ..+. .+
T Consensus 267 ~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~--------d~~i~i~d~~~-~~--~~~~~~~~~----~~v~--~~ 325 (445)
T 2ovr_B 267 ETETC--LHTLQGHTNRVYSLQF--DGIHVVSGSL--------DTSIRVWDVET-GN--CIHTLTGHQ----SLTS--GM 325 (445)
T ss_dssp GGTEE--EEEECCCSSCEEEEEE--CSSEEEEEET--------TSCEEEEETTT-CC--EEEEECCCC----SCEE--EE
T ss_pred CCCcE--eEEecCCCCceEEEEE--CCCEEEEEeC--------CCeEEEEECCC-CC--EEEEEcCCc----ccEE--EE
Confidence 88761 2233323333444455 8888774441 34688999874 43 233344322 2233 34
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEEC
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl 388 (548)
++++++++.... +| .|..+|+.+++.............+ .....+ +++.| ++...+| .|.++|+
T Consensus 326 ~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~-----v~~~~~-----~~~~l-~s~~~dg--~v~iwd~ 389 (445)
T 2ovr_B 326 ELKDNILVSGNA-DS--TVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQF-----NKNFV-ITSSDDG--TVKLWDL 389 (445)
T ss_dssp EEETTEEEEEET-TS--CEEEEETTTCCEEEEECSTTSCSSC-----EEEEEE-----CSSEE-EEEETTS--EEEEEET
T ss_pred EEeCCEEEEEeC-CC--eEEEEECCCCcEEEEEccCCCCCCC-----EEEEEE-----CCCEE-EEEeCCC--eEEEEEC
Confidence 456775555444 44 4666777776643322111001111 112333 44444 4555555 4666788
Q ss_pred CCCceE-eec-----CCCceeEee--eecCCEEEEEEecC-CCCCeEEEEEcC
Q 008927 389 FGHSLS-LLD-----IPFTDIDNI--TLGNDCLFVEGASG-VEPSSVAKVTLD 432 (548)
Q Consensus 389 ~~g~~~-~l~-----~~~~~~~~~--s~d~~~l~~~~ss~-~~p~~l~~~d~~ 432 (548)
.+++.. .+. .....+..+ ++++ .++++++.. .....|+++|.+
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 390 KTGEFIRNLVTLESGGSGGVVWRIRASNTK-LVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp TTCCEEEEEEECTTGGGTCEEEEEEECSSE-EEEEEECSSSSSCCEEEEEECC
T ss_pred CCCceeeeeeccccCCCCceEEEEEecCCE-EEEEEcccCCCCccEEEEEECC
Confidence 887643 341 112234444 3333 343444332 235677888864
No 335
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.79 E-value=0.019 Score=59.33 Aligned_cols=160 Identities=8% Similarity=-0.073 Sum_probs=85.8
Q ss_pred eeEEECCEEEE---EeCCCCeEEEEeCCCC-CC--Cc-e---ecCCCCCCCCceecceeeCCC-CCEEEEEEeccCCCCC
Q 008927 149 AFRIFGDTVIF---SNYKDQRLYKHSIDSK-DS--SP-L---PITPDYGEPLVSYADGIFDPR-FNRYVTVREDRRQDAL 217 (548)
Q Consensus 149 ~~~~~~~~i~F---~~~~~~~Ly~~~~~~~-~~--~~-~---~lT~~~~~~~~~~~~~~~SpD-G~~i~~v~~~~~~~~~ 217 (548)
+|++++..|+. +...++.|.+.++... .+ +. + .+....+ ....+..+.|+|+ ++.|+....+
T Consensus 99 ~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~~~las~s~D------ 171 (434)
T 2oit_A 99 ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD-AGGMVIDMKWNPTVPSMVAVCLAD------ 171 (434)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS-GGGSEEEEEECSSCTTEEEEEETT------
T ss_pred EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCC-CCCceEEEEECCCCCCEEEEEECC------
Confidence 57777777765 4445666777776431 00 11 1 1111100 1234667889998 5665554333
Q ss_pred CceeEEEEEECCCCCccCcEEeeec-CCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCC
Q 008927 218 NSTTEIVAIALNGQNIQEPKVLVSG-SDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD 296 (548)
Q Consensus 218 ~~~~~l~~idl~~g~~~~~~~L~~~-~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~ 296 (548)
..|.++|+.++. ......+ ...+....|||||++|+-... ...|.+.++. ++ ....+....
T Consensus 172 ---g~v~iwD~~~~~---~~~~~~~~~~~v~~v~wspdg~~lasgs~--------dg~v~iwd~~--~~--~~~~~~~~~ 233 (434)
T 2oit_A 172 ---GSIAVLQVTETV---KVCATLPSTVAVTSVCWSPKGKQLAVGKQ--------NGTVVQYLPT--LQ--EKKVIPCPP 233 (434)
T ss_dssp ---SCEEEEEESSSE---EEEEEECGGGCEEEEEECTTSSCEEEEET--------TSCEEEECTT--CC--EEEEECCCT
T ss_pred ---CeEEEEEcCCCc---ceeeccCCCCceeEEEEcCCCCEEEEEcC--------CCcEEEEccC--Cc--ccccccCCc
Confidence 358888998875 3222222 334667799999999985441 2468888876 22 122222211
Q ss_pred C-C--cccCCcCceECcCCcEEEE-EeCCCCe----eeEEEEeccC
Q 008927 297 P-T--IVESPTEPKWSSKGELFFV-TDRKNGF----WNLHKWIESN 334 (548)
Q Consensus 297 ~-~--~~~~~~~~~wspDG~L~~~-sd~~~g~----~~Ly~~d~~~ 334 (548)
. . ....+....|++++.+++. +.. +|. ..++.+++..
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~-dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAA-DGTLETSPDVVMALLPK 278 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEET-TCCSSSCCEEEEEECCC
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccC-CCccCCCCceEEEEecc
Confidence 0 0 0024667899998874333 332 322 3466666543
No 336
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.78 E-value=0.13 Score=49.42 Aligned_cols=180 Identities=9% Similarity=-0.021 Sum_probs=91.6
Q ss_pred eEEEEEECCCCCccCcEEeeecCC--ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCC
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGSD--FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT 298 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~~--~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~ 298 (548)
..|+++|.++|+ ...-..... ......++|||+.|+ +. ...|+.++.+ |++ ...+.... .
T Consensus 15 ~~v~~~d~~tG~---~~w~~~~~~~~~~~~~~~~pdG~ilv--s~--------~~~V~~~d~~--G~~--~W~~~~~~-~ 76 (276)
T 3no2_A 15 NKIAIINKDTKE---IVWEYPLEKGWECNSVAATKAGEILF--SY--------SKGAKMITRD--GRE--LWNIAAPA-G 76 (276)
T ss_dssp SEEEEEETTTTE---EEEEEECCTTCCCCEEEECTTSCEEE--EC--------BSEEEEECTT--SCE--EEEEECCT-T
T ss_pred CEEEEEECCCCe---EEEEeCCCccCCCcCeEECCCCCEEE--eC--------CCCEEEECCC--CCE--EEEEcCCC-C
Confidence 579999998887 332222221 244567899998555 32 2358888773 542 22232211 1
Q ss_pred cccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC
Q 008927 299 IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN 378 (548)
Q Consensus 299 ~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~ 378 (548)
..+....+++||++++.... ....|+.++.++..+..+... .....+... .....+.+ +++.| ++. .
T Consensus 77 --~~~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~Gk~l~~~~~~-~~~~~~~~~--~~~v~~~~---~G~~l-v~~--~ 143 (276)
T 3no2_A 77 --CEMQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFE-TGIERPHAQ--FRQINKNK---KGNYL-VPL--F 143 (276)
T ss_dssp --CEEEEEEECTTSCEEEEEES--TTEEEEEECTTSCEEEEEEEC-CSCSSGGGS--CSCCEECT---TSCEE-EEE--T
T ss_pred --ccccccEECCCCCEEEEecC--CCCEEEEEeCCCCEEEEEecc-CCCCccccc--ccCceECC---CCCEE-EEe--c
Confidence 23456778999995554321 135788888754433333211 111111100 11122332 55544 333 2
Q ss_pred CeEEEEEEECCCCce-EeecCCCceeE-eeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 379 GRSYLGILDDFGHSL-SLLDIPFTDID-NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 379 g~~~L~~~dl~~g~~-~~l~~~~~~~~-~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
....|+.+|.+ |+. ..+..+..... ...++++ +++.... ...|+.+|+++|+.
T Consensus 144 ~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~---~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 144 ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGD---AHCFVQLNLESNRI 198 (276)
T ss_dssp TTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBT---TSEEEEECTTTCCE
T ss_pred CCCEEEEECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCC---CCeEEEEeCcCCcE
Confidence 34468899998 653 34443321111 1233444 4444332 24688999887764
No 337
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.77 E-value=0.38 Score=45.52 Aligned_cols=225 Identities=12% Similarity=0.063 Sum_probs=119.2
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
+.|++....++.|++++.++ +.+.+.... .......+.++++|.. ++. ... ...|+++|.+ ++
T Consensus 26 g~l~v~~~~~~~v~~~d~~~---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v~-~~~-------~~~i~~~~~~-g~-- 88 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLDG---KITEYPLPT--PDAKVMCLTISSDGEV-WFT-ENA-------ANKIGRITKK-GI-- 88 (299)
T ss_dssp SCEEEEETTTTEEEEECTTC---CEEEEECSS--TTCCEEEEEECTTSCE-EEE-ETT-------TTEEEEECTT-SC--
T ss_pred CCEEEEecCCCcEEEEcCCC---CeEEecCCc--ccCceeeEEECCCCCE-EEe-CCC-------CCeEEEECCC-Cc--
Confidence 35677665567899998763 333332110 0123456678899874 333 221 1368999987 44
Q ss_pred CcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 235 EPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 235 ~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
.+.+.. .........++|||+ | |+... ....|++++.+ +++. ...+.... .....+.+++||
T Consensus 89 -~~~~~~~~~~~~~~~i~~~~~g~-l-~v~~~------~~~~i~~~d~~--g~~~-~~~~~~~~----~~~~~i~~~~~g 152 (299)
T 2z2n_A 89 -IKEYTLPNPDSAPYGITEGPNGD-I-WFTEM------NGNRIGRITDD--GKIR-EYELPNKG----SYPSFITLGSDN 152 (299)
T ss_dssp -EEEEECSSTTCCEEEEEECTTSC-E-EEEET------TTTEEEEECTT--CCEE-EEECSSTT----CCEEEEEECTTS
T ss_pred -EEEEeCCCcCCCceeeEECCCCC-E-EEEec------CCceEEEECCC--CCEE-EecCCCCC----CCCceEEEcCCC
Confidence 444432 122344567889986 3 34422 13578888763 4421 11122111 334567889999
Q ss_pred cEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 313 ~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
++|+.... . ..|+++++ +++.+.+... .....| ..+.+.+ + +.|++.. .+...|+++|. +++
T Consensus 153 ~l~v~~~~-~--~~i~~~~~-~g~~~~~~~~-~~~~~~------~~i~~~~---~-g~l~v~~--~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 153 ALWFTENQ-N--NAIGRITE-SGDITEFKIP-TPASGP------VGITKGN---D-DALWFVE--IIGNKIGRITT-SGE 214 (299)
T ss_dssp CEEEEETT-T--TEEEEECT-TCCEEEEECS-STTCCE------EEEEECT---T-SSEEEEE--TTTTEEEEECT-TCC
T ss_pred CEEEEeCC-C--CEEEEEcC-CCcEEEeeCC-CCCCcc------eeEEECC---C-CCEEEEc--cCCceEEEECC-CCc
Confidence 87765532 2 36889998 7766544211 011111 1133331 3 4465443 22346889998 777
Q ss_pred eEeecCC--CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 393 LSLLDIP--FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 393 ~~~l~~~--~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
.+.+..+ ......+ ++++ .+++... ....|+++|. +++
T Consensus 215 ~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~---~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 215 ITEFKIPTPNARPHAITAGAGI-DLWFTEW---GANKIGRLTS-NNI 256 (299)
T ss_dssp EEEEECSSTTCCEEEEEECSTT-CEEEEET---TTTEEEEEET-TTE
T ss_pred EEEEECCCCCCCceeEEECCCC-CEEEecc---CCceEEEECC-CCc
Confidence 6655332 2334444 3344 4555432 2467899987 444
No 338
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=96.74 E-value=0.0028 Score=61.10 Aligned_cols=58 Identities=22% Similarity=0.339 Sum_probs=40.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccc-cCccC-hHHHHHHhcCcEEEEeCCCCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA-RGILN-LSIQYWTSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~-~~~~~-~~~Q~~asrGyaVl~~NyRGStGy 538 (548)
+|.++ .+|.|.+ ++.|+||++|||....- ...+. .....++..||.|+.+|||+...+
T Consensus 13 ~~~~~--~~y~p~~--------~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~ 72 (274)
T 2qru_A 13 NGATV--TIYPTTT--------EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT 72 (274)
T ss_dssp TSCEE--EEECCSS--------SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS
T ss_pred CCeeE--EEEcCCC--------CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC
Confidence 66554 5677742 34699999999986432 22342 345678889999999999997654
No 339
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.73 E-value=0.88 Score=49.69 Aligned_cols=52 Identities=10% Similarity=0.055 Sum_probs=33.0
Q ss_pred EEEEEEECCCCceE-eecCCCceeE-eeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 381 SYLGILDDFGHSLS-LLDIPFTDID-NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 381 ~~L~~~dl~~g~~~-~l~~~~~~~~-~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
..|+.+|+.+|++. ++..+..... .++.+++.+++ ++ ....++.+|+++++.
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~-g~---~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQ-GT---ADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEE-EC---TTSEEEEEETTTCCE
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEE-EC---CCCcEEEEECCCCce
Confidence 68999999999754 3332221222 23556775544 42 347899999988874
No 340
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=96.68 E-value=0.0045 Score=58.48 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=47.0
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
+...++. ||.+++...+.|. ..|+||++||++.... .|....+.|+++||.|+.+|+||-.
T Consensus 5 ~~~~~~~--~g~~l~~~~~g~~----------~~~~vv~~hG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~G~G 65 (286)
T 3qit_A 5 EEKFLEF--GGNQICLCSWGSP----------EHPVVLCIHGILEQGL--AWQEVALPLAAQGYRVVAPDLFGHG 65 (286)
T ss_dssp EEEEEEE--TTEEEEEEEESCT----------TSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTST
T ss_pred hhheeec--CCceEEEeecCCC----------CCCEEEEECCCCcccc--hHHHHHHHhhhcCeEEEEECCCCCC
Confidence 4444554 7999999888652 2378999999986554 4667788999999999999999843
No 341
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=96.65 E-value=0.00056 Score=73.04 Aligned_cols=62 Identities=19% Similarity=0.273 Sum_probs=41.2
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCcc-ChHHHHHH-hcCcEEEEeCCC-CCCCC
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWT-SRGWAFVDVNYG-GSTGL 538 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~-~~~~Q~~a-srGyaVl~~NyR-GStGy 538 (548)
+. |...+ -+|.|.+. .+++|+||+||||....-.... ....+.|+ .+|++|+.+||| |..||
T Consensus 91 se-dcl~l--nv~~P~~~------~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf 155 (537)
T 1ea5_A 91 SE-DCLYL--NIWVPSPR------PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGF 155 (537)
T ss_dssp CS-CCCEE--EEEECSSC------CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHH
T ss_pred CC-cCCeE--EEeccCCC------CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCcccccc
Confidence 55 77555 45567531 3578999999999865432221 12346777 789999999999 43343
No 342
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=96.65 E-value=0.001 Score=65.30 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=43.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGy 538 (548)
+|.. .+.+|.|.+ +.+.|+||++||+..... .|....+.|+++||.|+.+||||...-
T Consensus 80 ~g~~-~~~~~~p~~-------~~~~p~vv~~HG~~~~~~--~~~~~~~~la~~G~~vv~~d~~g~g~s 137 (306)
T 3vis_A 80 DGFG-GGTIYYPRE-------NNTYGAIAISPGYTGTQS--SIAWLGERIASHGFVVIAIDTNTTLDQ 137 (306)
T ss_dssp SSSC-CEEEEEESS-------CSCEEEEEEECCTTCCHH--HHHHHHHHHHTTTEEEEEECCSSTTCC
T ss_pred CCCc-ceEEEeeCC-------CCCCCEEEEeCCCcCCHH--HHHHHHHHHHhCCCEEEEecCCCCCCC
Confidence 5554 456677753 236799999999875433 456678899999999999999986443
No 343
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=96.62 E-value=0.00055 Score=73.88 Aligned_cols=48 Identities=17% Similarity=0.238 Sum_probs=33.8
Q ss_pred CCCCcEEEEEccCccccccCcc-ChHHHHHHh-cCcEEEEeCCC-CCCCCC
Q 008927 492 EEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYG-GSTGLS 539 (548)
Q Consensus 492 ~~~~Pliv~iHGGP~~~~~~~~-~~~~Q~~as-rGyaVl~~NyR-GStGyG 539 (548)
++++|+||+||||....-.... ....+.|++ .|++|+.+||| |.-||+
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl 188 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFL 188 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHC
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhc
Confidence 4678999999999865433321 122356776 79999999999 655553
No 344
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=96.59 E-value=0.0006 Score=72.71 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=40.6
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCcc-ChHHHHHHh-cCcEEEEeCCC-CCCCC
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGIL-NLSIQYWTS-RGWAFVDVNYG-GSTGL 538 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~-~~~~Q~~as-rGyaVl~~NyR-GStGy 538 (548)
+. |...+ -+|.|.+. .+++|+||+||||....-.... ....+.|++ +|++|+.+||| |..||
T Consensus 89 ~e-dcl~l--nv~~P~~~------~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf 153 (529)
T 1p0i_A 89 SE-DCLYL--NVWIPAPK------PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGF 153 (529)
T ss_dssp CS-CCCEE--EEEEESSC------CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHH
T ss_pred CC-cCCeE--EEeeCCCC------CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEeccccccccc
Confidence 44 76555 45667531 2578999999999764332221 123467777 79999999999 44444
No 345
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.51 E-value=0.11 Score=53.63 Aligned_cols=159 Identities=12% Similarity=0.076 Sum_probs=88.6
Q ss_pred cceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCC
Q 008927 194 ADGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDK 272 (548)
Q Consensus 194 ~~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~ 272 (548)
..+.++| ++..|+++ ... ..|+++|++++. .+.+......-...+|++||++|++..+.... ..
T Consensus 140 ~~lavdp~~~g~Lyv~-d~~--------~~I~~id~~~~~---v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~---~~ 204 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLV-GEQ--------HPTRLIDFEKEY---VSTVYSGLSKVRTICWTHEADSMIITNDQNNN---DR 204 (430)
T ss_dssp CEEEEETTEEEEEEEE-EBT--------EEEEEEETTTTE---EEEEECCCSCEEEEEECTTSSEEEEEECCSCT---TS
T ss_pred CEEEECCCCCCeEEEE-eCC--------CcEEEEECCCCE---EEEEecCCCCcceEEEeCCCCEEEEEeCCCCc---cc
Confidence 3467888 46665554 321 579999999987 66665544445567899999977654422111 12
Q ss_pred ceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc-CCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCc
Q 008927 273 AELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPL 351 (548)
Q Consensus 273 ~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp-DG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~ 351 (548)
..+++++.+ |.+.....+... .......++| +|.||+. |... ..|+++++++++...+.... ....|
T Consensus 205 ~~v~~~~~~--g~~~~~~~l~~~-----~~p~giavdp~~g~lyv~-d~~~--~~V~~~~~~~~~~~~~~~~~-~~~~P- 272 (430)
T 3tc9_A 205 PNNYILTRE--SGFKVITELTKG-----QNCNGAETHPINGELYFN-SWNA--GQVFRYDFTTQETTPLFTIQ-DSGWE- 272 (430)
T ss_dssp EEEEEEEGG--GTSCSEEEEEEC-----SSCCCEEECTTTCCEEEE-ETTT--TEEEEEETTTTEEEEEEECS-SSSCC-
T ss_pred ceEEEEeCC--CceeeeeeeccC-----CCceEEEEeCCCCEEEEE-ECCC--CEEEEEECCCCcEEEEEEcC-CCCcc-
Confidence 245555543 433222333321 2345678899 5656554 4423 37999999877664443211 11112
Q ss_pred ccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC
Q 008927 352 WVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 389 (548)
Q Consensus 352 w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~ 389 (548)
..+++.| ++++||++-. ....|++++.+
T Consensus 273 -----~gia~~p---dG~~lyv~d~--~~~~I~~~~~d 300 (430)
T 3tc9_A 273 -----FHIQFHP---SGNYAYIVVV--NQHYILRSDYD 300 (430)
T ss_dssp -----EEEEECT---TSSEEEEEET--TTTEEEEEEEE
T ss_pred -----eeEEEcC---CCCEEEEEEC--CCCEEEEEeCC
Confidence 1245554 6776776542 33456666554
No 346
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.049 Score=55.54 Aligned_cols=153 Identities=7% Similarity=-0.044 Sum_probs=84.6
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNI 233 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~ 233 (548)
+.++++...++.|++.++.. ++. ..+.... ....+..+.|+|+|+.|+....+ ..|.++|+.+++.
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~~d---------g~i~iwd~~~~~~ 248 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRT--LERLQIIENSP--RHGAVSSICIDEECCVLILGTTR---------GIIDIWDIRFNVL 248 (437)
T ss_dssp CEEEEEEETTSEEEEEETTT--CCEEEEEECCG--GGCCEEEEEECTTSCEEEEEETT---------SCEEEEETTTTEE
T ss_pred CCEEEEEeCCCeEEEEeCCC--CeeeEEEccCC--CCCceEEEEECCCCCEEEEEcCC---------CeEEEEEcCCccE
Confidence 34555555678899999876 444 3333210 01245677899999987765433 3588889988761
Q ss_pred cCcEEee-ecCCceeee----EECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCC----------
Q 008927 234 QEPKVLV-SGSDFYAFP----RMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPT---------- 298 (548)
Q Consensus 234 ~~~~~L~-~~~~~~~~p----~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~---------- 298 (548)
...+. .....+... .|+|||+.|+-.. ....|.+.|+.. ++. ...+.+....
T Consensus 249 --~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~--------~dg~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 315 (437)
T 3gre_A 249 --IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS--------SKTFLTIWNFVK-GHC--QYAFINSDEQPSMEHFLPIE 315 (437)
T ss_dssp --EEEEBCTTCEEEEEEEECTTTCTTEEEEEEES--------TTEEEEEEETTT-TEE--EEEEESSSSCCCGGGGSCBC
T ss_pred --EEEEecCCCCceEEEEeccccCCCccEEEEEc--------CCCcEEEEEcCC-CcE--EEEEEcCCCCCccceecccc
Confidence 22222 222223333 5667887776322 135688889874 431 2222211100
Q ss_pred ------------cccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCee
Q 008927 299 ------------IVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 299 ------------~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
....+....|+ ++++++.... +| .|..+|+.+++.
T Consensus 316 ~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~-d~--~i~~wd~~~~~~ 362 (437)
T 3gre_A 316 KGLEELNFCGIRSLNALSTISVS-NDKILLTDEA-TS--SIVMFSLNELSS 362 (437)
T ss_dssp SSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG-GT--EEEEEETTCGGG
T ss_pred cccccceecccccCCceEEEEEC-CceEEEecCC-CC--eEEEEECCCccc
Confidence 00234556777 6665555443 33 577778777653
No 347
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.49 E-value=0.13 Score=51.03 Aligned_cols=218 Identities=10% Similarity=0.074 Sum_probs=107.2
Q ss_pred cccCCCCCCCcCCHHHHhcCCCccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCC-CcccC-CCCCCccccceee
Q 008927 68 ITAPYGSWKSPLTADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDE-PSDIT-PKEYAVRTTAQEY 145 (548)
Q Consensus 68 ~~~~~g~w~spit~~~l~~~~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~-~~~lt-~~~~~~r~~v~~y 145 (548)
+..||..|... ....-..+..+.++|.+++|++.......+...|++++... ++ .+.+. +.... ... .+
T Consensus 51 ~~~~~p~~~~~-----~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t-g~~~~~~~~~~~~~-~~~--~~ 121 (343)
T 2qe8_A 51 GLIPFPPQSGN-----AIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN-NQLSRVIYLPPPIT-LSN--SF 121 (343)
T ss_dssp EEEESCCCCSS-----CCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT-TEEEEEEECCTTTS-CTT--CC
T ss_pred CeecCCCcccC-----cccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC-CeEEEEEECChhhc-ccc--cc
Confidence 35577777631 11112456677888756787776321000123466665432 23 22221 11100 000 00
Q ss_pred CCeeeEEE--CCEEEEEeC---CCCeEEEEeCCCCCCCceecCCC---CCC-------CC----------------ceec
Q 008927 146 GGGAFRIF--GDTVIFSNY---KDQRLYKHSIDSKDSSPLPITPD---YGE-------PL----------------VSYA 194 (548)
Q Consensus 146 gg~~~~~~--~~~i~F~~~---~~~~Ly~~~~~~~~~~~~~lT~~---~~~-------~~----------------~~~~ 194 (548)
-.....+ ++.+|+++. .+..|+++++++ ++..++... ... .. ....
T Consensus 122 -~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~--g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 198 (343)
T 2qe8_A 122 -VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT--GLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN 198 (343)
T ss_dssp -CCEEEEETTTTEEEEEECCSGGGCEEEEEETTT--CCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE
T ss_pred -cceEEEecCCCEEEEEcCccCCCCeEEEEECCC--CCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccc
Confidence 0123444 567888775 567899999876 444433211 000 00 0123
Q ss_pred ceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC---CCCcc------CcEEeeecCCceeeeEECCCCCEEEEEEecC
Q 008927 195 DGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN---GQNIQ------EPKVLVSGSDFYAFPRMDPRGERMAWIEWHH 265 (548)
Q Consensus 195 ~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~---~g~~~------~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~ 265 (548)
.+.|||||+.|++.... ...||.++.. .+... ....+.. ...-...++++||. | |++..
T Consensus 199 gia~s~dg~~ly~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~-~g~pdgia~d~~G~-l-~va~~- 266 (343)
T 2qe8_A 199 GIVLDAENEWLYLSPMH--------STSMYRIKSADLSNLQLTDAELGSKIERYSE-KPICDGISIDKDHN-I-YVGDL- 266 (343)
T ss_dssp EEEECTTSCEEEEEESS--------CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE-CCSCSCEEECTTCC-E-EEEEG-
T ss_pred eeEeccCCCEEEEEeCC--------CCeEEEEEHHHhcCCCCChhhhhcceEeccc-CCCCceEEECCCCC-E-EEEcc-
Confidence 47899999987665322 2479999853 11100 0112211 11223457899986 4 44421
Q ss_pred CCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeC
Q 008927 266 PNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR 320 (548)
Q Consensus 266 ~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~ 320 (548)
....|++++.+ +|++ ..+...+ . ......+.+++||+||+++.+
T Consensus 267 -----~~~~V~~~d~~-~G~~---~~~~~~~-~-~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 267 -----AHSAIGVITSA-DRAY---KLLVTDE-K-LSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp -----GGTEEEEEETT-TTEE---EEEEECG-G-GSCEEEEEECTTSCEEEEECC
T ss_pred -----CCCeEEEEECC-CCCE---EEEEECC-c-eecCCeeEECCCCcEEEEeCc
Confidence 24678888873 3542 2222211 0 023456788888888777654
No 348
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.41 E-value=0.14 Score=51.66 Aligned_cols=73 Identities=8% Similarity=-0.092 Sum_probs=45.3
Q ss_pred eecceeeCC--------CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEe
Q 008927 192 SYADGIFDP--------RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEW 263 (548)
Q Consensus 192 ~~~~~~~Sp--------DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~ 263 (548)
.+.+..|+| ||+.|+-...| ..|.++|+.++.. ...+...........|+|++..++....
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D---------~tv~~Wd~~~~~~--~~~~~~~~~~v~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDD---------CTLIIWRLTDEGP--ILAGYPLSSPGISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETT---------SEEEEEEEETTEE--EEEEEECSSCEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEECC---------CeEEEEECCCCce--eeeecCCCCCcEEEEECCCCCceEEecC
Confidence 456677887 88877665444 3577778766541 3344444555667789999875443442
Q ss_pred cCCCCCCCCceEEEEEecC
Q 008927 264 HHPNMPWDKAELWVGYISE 282 (548)
Q Consensus 264 ~~~~~p~~~~~L~v~~~~~ 282 (548)
. ...|.+.|+..
T Consensus 207 ~-------d~~v~~wd~~t 218 (393)
T 4gq1_A 207 R-------NGNIRIFDWTL 218 (393)
T ss_dssp T-------TSEEEEEETTC
T ss_pred C-------CCEEEEEECCC
Confidence 1 34577777764
No 349
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.40 E-value=0.067 Score=53.59 Aligned_cols=165 Identities=15% Similarity=0.049 Sum_probs=73.9
Q ss_pred CCHHHHhcCCCccCceEEcCCCcEEEEEecCCCCCceEEEEcCCCCCCCCcccCCCCCCccccceeeCCeeeEEE---CC
Q 008927 79 LTADVVSGASKRLGGTAVDGHGRLIWLESRPTEAGRGVLVKEPAKAGDEPSDITPKEYAVRTTAQEYGGGAFRIF---GD 155 (548)
Q Consensus 79 it~~~l~~~~~~~~~~~~spg~~i~~~~~~~~e~gr~~l~~~~~~~~~~~~~lt~~~~~~r~~v~~ygg~~~~~~---~~ 155 (548)
++++.+...-.....+.+.|++++|..+. .|+ |++++.+ +. +.+..-+.... ....--|-++.++ ++
T Consensus 19 ~~~~~va~~l~~P~~ia~~pdG~l~V~e~----~g~--I~~~d~~--G~-~~~~~~~v~~~-g~~g~~gia~~pdf~~~g 88 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLGGGRYLVTER----PGR--LVLISPS--GK-KLVASFDVANV-GEAGLLGLALHPEFPKKS 88 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEETTEEEEEET----TTE--EEEECSS--CE-EEEEECCCCCS-TTCSEEEEEECTTTTTSC
T ss_pred eEEEEEeCCCCCCeEEEEcCCCeEEEEeC----CCE--EEEEeCC--Cc-eEeeccceeec-CCCceeeEEeCCCCCcCC
Confidence 34444444324556778888556666653 244 5555444 33 33321100000 0000011234343 45
Q ss_pred EEEEEeC---CC----CeEEEEeCCCCCCC---ceec-CCCCCCCCceecceeeCCCCCEEEEEEeccCC-----CCCCc
Q 008927 156 TVIFSNY---KD----QRLYKHSIDSKDSS---PLPI-TPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-----DALNS 219 (548)
Q Consensus 156 ~i~F~~~---~~----~~Ly~~~~~~~~~~---~~~l-T~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~-----~~~~~ 219 (548)
.||+... .+ .+|++++++++... .+.| +.........-..+.|+|||. |++...+... .....
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~ 167 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSL 167 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCC
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCC
Confidence 7766543 23 68999998752011 2222 111000011124688999996 4443222110 01123
Q ss_pred eeEEEEEECCCCCcc-----CcEEeeecCCceeeeEECCC
Q 008927 220 TTEIVAIALNGQNIQ-----EPKVLVSGSDFYAFPRMDPR 254 (548)
Q Consensus 220 ~~~l~~idl~~g~~~-----~~~~L~~~~~~~~~p~~SPD 254 (548)
...|++++.++.-.. ..+++..+...-...+|+|+
T Consensus 168 ~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~ 207 (354)
T 3a9g_A 168 AGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRA 207 (354)
T ss_dssp SSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTT
T ss_pred CeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCC
Confidence 357999988765100 03455544333334567773
No 350
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=96.37 E-value=0.00089 Score=65.01 Aligned_cols=72 Identities=13% Similarity=0.101 Sum_probs=50.3
Q ss_pred CccCCeEEEeeccCC-CeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHh-cCcEEEEeCCCC
Q 008927 457 YFSLPELIEFPTEVP-GQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGG 534 (548)
Q Consensus 457 ~~~~pe~i~~~s~~d-G~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~as-rGyaVl~~NyRG 534 (548)
.+...+.+++.+. + |.++..++|.|.+ |++ +++||+|++.||+...... .....+.+++ .+++|+.++|++
T Consensus 9 ~~~~~~~~~~~S~-~~~~~~~~~vylP~~--y~~--~~~yPvly~l~G~~~~~~~--~~~~~~~l~~~~~~ivV~v~~~~ 81 (278)
T 2gzs_A 9 VFYHFSATSFDSV-DGTRHYRVWTAVPNT--TAP--ASGYPILYMLDGNAVMDRL--DDELLKQLSEKTPPVIVAVGYQT 81 (278)
T ss_dssp SSEEEEEEEEECT-TSSCEEEEEEEEESS--CCC--TTCEEEEEESSHHHHHHHC--CHHHHHHHTTSCCCEEEEEEESS
T ss_pred CCCceEEEEEEcC-CCCceEEEEEECCCC--CCC--CCCCCEEEEeeChhHHHHH--HHHHHHHhccCCCeEEEEEcCCC
Confidence 4556778889886 5 6899999999965 653 5789998877777642211 1123355665 789999888876
Q ss_pred C
Q 008927 535 S 535 (548)
Q Consensus 535 S 535 (548)
.
T Consensus 82 ~ 82 (278)
T 2gzs_A 82 N 82 (278)
T ss_dssp S
T ss_pred C
Confidence 4
No 351
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.37 E-value=1 Score=45.67 Aligned_cols=223 Identities=10% Similarity=0.075 Sum_probs=119.8
Q ss_pred EEECCEEEEEeCCCCeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 151 RIFGDTVIFSNYKDQRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 151 ~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
..+++.| ++...++.|.+.++.. ++. ..+... ...+..+.| +++.|+....+ ..|.++|+.
T Consensus 166 ~~~~~~l-~s~~~dg~i~vwd~~~--~~~~~~~~~h----~~~v~~~~~--~~~~l~s~s~d---------g~i~~wd~~ 227 (445)
T 2ovr_B 166 QMRDNII-ISGSTDRTLKVWNAET--GECIHTLYGH----TSTVRCMHL--HEKRVVSGSRD---------ATLRVWDIE 227 (445)
T ss_dssp EEETTEE-EEEETTSCEEEEETTT--TEEEEEECCC----SSCEEEEEE--ETTEEEEEETT---------SEEEEEESS
T ss_pred EecCCEE-EEEeCCCeEEEEECCc--CcEEEEECCC----CCcEEEEEe--cCCEEEEEeCC---------CEEEEEECC
Confidence 3455544 4444677888888876 433 233322 123444455 45666554332 478899999
Q ss_pred CCCccCcE-EeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceE
Q 008927 230 GQNIQEPK-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKW 308 (548)
Q Consensus 230 ~g~~~~~~-~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~w 308 (548)
+++ .. .+...........+ ||+.|+-... ...|.+.|+.. ++ ....+.+.. ..+....|
T Consensus 228 ~~~---~~~~~~~~~~~v~~~~~--~~~~l~~~~~--------dg~i~iwd~~~-~~--~~~~~~~~~----~~v~~~~~ 287 (445)
T 2ovr_B 228 TGQ---CLHVLMGHVAAVRCVQY--DGRRVVSGAY--------DFMVKVWDPET-ET--CLHTLQGHT----NRVYSLQF 287 (445)
T ss_dssp SCC---EEEEEECCSSCEEEEEE--CSSCEEEEET--------TSCEEEEEGGG-TE--EEEEECCCS----SCEEEEEE
T ss_pred CCc---EEEEEcCCcccEEEEEE--CCCEEEEEcC--------CCEEEEEECCC-Cc--EeEEecCCC----CceEEEEE
Confidence 886 33 33333333444445 7888774441 34688889874 43 233344332 34556667
Q ss_pred CcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEEC
Q 008927 309 SSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDD 388 (548)
Q Consensus 309 spDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl 388 (548)
||+.++.... +| .|..+|+.+++........ ...+ ..+.+ +++.| ++...++ .|.++|+
T Consensus 288 --~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~-----~~~v---~~~~~-----~~~~l-~~~~~dg--~i~vwd~ 346 (445)
T 2ovr_B 288 --DGIHVVSGSL-DT--SIRVWDVETGNCIHTLTGH-----QSLT---SGMEL-----KDNIL-VSGNADS--TVKIWDI 346 (445)
T ss_dssp --CSSEEEEEET-TS--CEEEEETTTCCEEEEECCC-----CSCE---EEEEE-----ETTEE-EEEETTS--CEEEEET
T ss_pred --CCCEEEEEeC-CC--eEEEEECCCCCEEEEEcCC-----cccE---EEEEE-----eCCEE-EEEeCCC--eEEEEEC
Confidence 7775555444 34 4677787777653322110 0111 11233 45544 3444455 4666788
Q ss_pred CCCce-EeecC---CCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 389 FGHSL-SLLDI---PFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 389 ~~g~~-~~l~~---~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
.+++. ..+.. ....+..+..+++.+ ++++. -..|.++|+.+++.
T Consensus 347 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~s~~~---dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 347 KTGQCLQTLQGPNKHQSAVTCLQFNKNFV-ITSSD---DGTVKLWDLKTGEF 394 (445)
T ss_dssp TTCCEEEEECSTTSCSSCEEEEEECSSEE-EEEET---TSEEEEEETTTCCE
T ss_pred CCCcEEEEEccCCCCCCCEEEEEECCCEE-EEEeC---CCeEEEEECCCCce
Confidence 77764 34443 222355555566544 34432 36788999887764
No 352
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.35 E-value=1 Score=49.13 Aligned_cols=80 Identities=6% Similarity=-0.129 Sum_probs=43.1
Q ss_pred eeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCcee
Q 008927 325 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDI 403 (548)
Q Consensus 325 ~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~ 403 (548)
..|+.+|+.+|++.--.+. ..+.|. -.+.. +++.+++ ... ...|+.+|+++|++. .+..+...+
T Consensus 457 g~l~A~D~~tG~~~W~~~~----~~~~~~-----g~~~~---~g~~v~~-g~~--dg~l~a~D~~tG~~lw~~~~~~~~~ 521 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEH----VSPWNG-----GTLTT---AGNVVFQ-GTA--DGRLVAYHAATGEKLWEAPTGTGVV 521 (677)
T ss_dssp EEEEEEETTTTEEEEEEEE----SSSCCC-----CEEEE---TTTEEEE-ECT--TSEEEEEETTTCCEEEEEECSSCCC
T ss_pred cEEEEEeCCCCcEEeecCC----CCCCcC-----cceEe---CCCEEEE-ECC--CCcEEEEECCCCceeeeeeCCCCcc
Confidence 5689999999886433221 122221 11221 5665554 333 346889999999754 444443221
Q ss_pred -Eee--eecCCEEEEEEec
Q 008927 404 -DNI--TLGNDCLFVEGAS 419 (548)
Q Consensus 404 -~~~--s~d~~~l~~~~ss 419 (548)
.++ ..+++.++.+.+.
T Consensus 522 ~~p~~y~~~G~~~v~~~~G 540 (677)
T 1kb0_A 522 AAPSTYMVDGRQYVSVAVG 540 (677)
T ss_dssp SCCEEEEETTEEEEEEEEC
T ss_pred cCCEEEEeCCEEEEEEecc
Confidence 222 3567666555444
No 353
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.35 E-value=0.036 Score=57.23 Aligned_cols=118 Identities=12% Similarity=0.032 Sum_probs=67.5
Q ss_pred ecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCC-----Cc-cCcEEee--e-cCCceeeeEECCC-CCEEEEEE
Q 008927 193 YADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQ-----NI-QEPKVLV--S-GSDFYAFPRMDPR-GERMAWIE 262 (548)
Q Consensus 193 ~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g-----~~-~~~~~L~--~-~~~~~~~p~~SPD-Gk~La~~~ 262 (548)
+..+.|+|||+.|+....... ....|.++|+.++ +. .....+. . ..+.+....|+|+ ++.|+-..
T Consensus 95 v~~l~~spdg~~lav~~~sgs-----~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSE-----YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETT-----TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred ccEEEEcCCCCEEEEEEeccC-----CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 567789999998875321110 1256788887654 10 0011121 1 2334667899998 66666444
Q ss_pred ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc
Q 008927 263 WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 263 ~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
. ...|.+.|+.. +. ......+.. ..+....|+|||+++++... +| .|..+|..
T Consensus 170 ~--------Dg~v~iwD~~~-~~--~~~~~~~~~----~~v~~v~wspdg~~lasgs~-dg--~v~iwd~~ 222 (434)
T 2oit_A 170 A--------DGSIAVLQVTE-TV--KVCATLPST----VAVTSVCWSPKGKQLAVGKQ-NG--TVVQYLPT 222 (434)
T ss_dssp T--------TSCEEEEEESS-SE--EEEEEECGG----GCEEEEEECTTSSCEEEEET-TS--CEEEECTT
T ss_pred C--------CCeEEEEEcCC-Cc--ceeeccCCC----CceeEEEEcCCCCEEEEEcC-CC--cEEEEccC
Confidence 2 34688889874 42 122222211 45778899999994444434 44 46667776
No 354
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=96.34 E-value=0.00092 Score=71.91 Aligned_cols=68 Identities=16% Similarity=0.190 Sum_probs=42.1
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc---c----ChHHHHHHhc-CcEEEEeCCC-CCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI---L----NLSIQYWTSR-GWAFVDVNYG-GST 536 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~---~----~~~~Q~~asr-GyaVl~~NyR-GSt 536 (548)
+.+. |...+. +|.|.+.. ..++++|+||+||||....-... + ....+.|+++ |++|+.+||| |..
T Consensus 75 ~~se-dcl~ln--v~~P~~~~---~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~ 148 (579)
T 2bce_A 75 YGNE-DCLYLN--IWVPQGRK---EVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPL 148 (579)
T ss_dssp ESCS-CCCEEE--EEEEECSS---SCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHH
T ss_pred CCCC-CCCEEE--EEECCCCC---CCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccc
Confidence 4465 775554 56675321 02467899999999986443221 1 1224667765 7999999999 555
Q ss_pred CCC
Q 008927 537 GLS 539 (548)
Q Consensus 537 GyG 539 (548)
||+
T Consensus 149 Gfl 151 (579)
T 2bce_A 149 GFL 151 (579)
T ss_dssp HHC
T ss_pred cCC
Confidence 553
No 355
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.31 E-value=0.98 Score=44.78 Aligned_cols=183 Identities=9% Similarity=0.063 Sum_probs=87.9
Q ss_pred eEEEEEECCCCCccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCc
Q 008927 221 TEIVAIALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~ 299 (548)
..|+.+|.++|+ ..--.. .......|... +| .| |+... ...|+.+|.+ +|+.. .+.-.......
T Consensus 113 g~l~a~d~~tG~---~~W~~~~~~~~~~~p~~~-~~-~v-~v~~~-------~g~l~~~d~~-tG~~~-W~~~~~~~~~~ 177 (376)
T 3q7m_A 113 AQVYALNTSDGT---VAWQTKVAGEALSRPVVS-DG-LV-LIHTS-------NGQLQALNEA-DGAVK-WTVNLDMPSLS 177 (376)
T ss_dssp SEEEEEETTTCC---EEEEEECSSCCCSCCEEE-TT-EE-EEECT-------TSEEEEEETT-TCCEE-EEEECCC----
T ss_pred CEEEEEECCCCC---EEEEEeCCCceEcCCEEE-CC-EE-EEEcC-------CCeEEEEECC-CCcEE-EEEeCCCCcee
Confidence 479999999997 432222 22234455554 33 44 34311 3579999987 45421 11111111000
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCC---CcccccCcceeeeeecCCCCEEEEEEE
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSR---PLWVFGINSYEIIQSHGEKNLIACSYR 376 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~---p~w~~~~~~~~~~~~~~d~~~l~~~~~ 376 (548)
......|... +|.+++.+. . ..|+.+|+++|+..--.+....... ............ .++.|++..
T Consensus 178 ~~~~~~~~~~-~~~v~~g~~--~--g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~v~~~~- 246 (376)
T 3q7m_A 178 LRGESAPTTA-FGAAVVGGD--N--GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-----VNGVVFALA- 246 (376)
T ss_dssp -CCCCCCEEE-TTEEEECCT--T--TEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-----ETTEEEEEC-
T ss_pred ecCCCCcEEE-CCEEEEEcC--C--CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-----ECCEEEEEe-
Confidence 0011334433 444544332 2 3688899888876432211000000 000000000111 355666543
Q ss_pred eCCeEEEEEEECCCCceEeecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 377 QNGRSYLGILDDFGHSLSLLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 377 ~~g~~~L~~~dl~~g~~~~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
. ...|+.+|+++|+..--.. .........+++.+++... ...|+.+|+++++.
T Consensus 247 ~--~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~l~~~~~----~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 247 Y--NGNLTALDLRSGQIMWKRE-LGSVNDFIVDGNRIYLVDQ----NDRVMALTIDGGVT 299 (376)
T ss_dssp T--TSCEEEEETTTCCEEEEEC-CCCEEEEEEETTEEEEEET----TCCEEEEETTTCCE
T ss_pred c--CcEEEEEECCCCcEEeecc-CCCCCCceEECCEEEEEcC----CCeEEEEECCCCcE
Confidence 2 2368899999887542211 1223334456777776543 35799999988873
No 356
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.30 E-value=0.69 Score=44.37 Aligned_cols=243 Identities=6% Similarity=-0.136 Sum_probs=118.5
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCC
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSD 244 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~ 244 (548)
..+|++++.. .+-+.+.... ..+.......-++ .|+++ .... .....++++++|+.+++...-+.+...+.
T Consensus 31 ~~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~-~l~v~-GG~~--~~~~~~~~~~~d~~~~~~~~W~~~~~~p~ 101 (301)
T 2vpj_A 31 DVVEKYDPKT--QEWSFLPSIT---RKRRYVASVSLHD-RIYVI-GGYD--GRSRLSSVECLDYTADEDGVWYSVAPMNV 101 (301)
T ss_dssp CCEEEEETTT--TEEEECCCCS---SCCBSCEEEEETT-EEEEE-CCBC--SSCBCCCEEEEETTCCTTCCCEEECCCSS
T ss_pred eEEEEEcCCC--CeEEeCCCCC---hhhccccEEEECC-EEEEE-cCCC--CCccCceEEEEECCCCCCCeeEECCCCCC
Confidence 3688888876 5555665432 1222221222344 44433 2211 11245689999998875100123322111
Q ss_pred -ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeC--C
Q 008927 245 -FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR--K 321 (548)
Q Consensus 245 -~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~--~ 321 (548)
....-...-+++ |..+.-.... -....++++|+.. +++.. +...+ . .........-+++||++.-. .
T Consensus 102 ~r~~~~~~~~~~~-lyv~GG~~~~--~~~~~~~~~d~~~-~~W~~---~~~~p-~--~r~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 102 RRGLAGATTLGDM-IYVSGGFDGS--RRHTSMERYDPNI-DQWSM---LGDMQ-T--AREGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp CCBSCEEEEETTE-EEEECCBCSS--CBCCEEEEEETTT-TEEEE---EEECS-S--CCBSCEEEEETTEEEEECCBCSS
T ss_pred CccceeEEEECCE-EEEEcccCCC--cccceEEEEcCCC-CeEEE---CCCCC-C--CcccceEEEECCEEEEECCCCCC
Confidence 111111222454 4333211111 1145799999874 55433 22211 0 11112222347777777422 1
Q ss_pred CCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC---eEEEEEEECCCCceEeecC
Q 008927 322 NGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---RSYLGILDDFGHSLSLLDI 398 (548)
Q Consensus 322 ~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g---~~~L~~~dl~~g~~~~l~~ 398 (548)
.....++.+|+++++.+.+.+.. .+... ..... -++.||+..-.++ ...++++|+++++++.+..
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p----~~r~~---~~~~~-----~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMA----TKRSG---AGVAL-----LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS 239 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCS----SCCBS---CEEEE-----ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred cccceEEEEeCCCCcEEeCCCCC----ccccc---ceEEE-----ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC
Confidence 22456999999999888775321 11110 11122 2455655432211 3578999999999988763
Q ss_pred -CCcee-EeeeecCCEEEEEEecCCC--CCeEEEEEcCCCceee
Q 008927 399 -PFTDI-DNITLGNDCLFVEGASGVE--PSSVAKVTLDDHKLKA 438 (548)
Q Consensus 399 -~~~~~-~~~s~d~~~l~~~~ss~~~--p~~l~~~d~~~~~~~~ 438 (548)
+.... .....-++.|++++..... ..+++++|+++.+.+.
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 240 MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred CCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 22111 1122335667766643222 2678999998877543
No 357
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=96.28 E-value=0.0085 Score=57.17 Aligned_cols=57 Identities=19% Similarity=0.383 Sum_probs=43.2
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+.+. ||.+++...+-|. .-|.||++||.+.... .|...++.|+++||.|+.+|+||-
T Consensus 4 ~~~~-~g~~l~y~~~g~~----------~~~~vvllHG~~~~~~--~w~~~~~~L~~~g~~vi~~D~~G~ 60 (276)
T 1zoi_A 4 VTTK-DGVQIFYKDWGPR----------DAPVIHFHHGWPLSAD--DWDAQLLFFLAHGYRVVAHDRRGH 60 (276)
T ss_dssp EECT-TSCEEEEEEESCT----------TSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred EECC-CCcEEEEEecCCC----------CCCeEEEECCCCcchh--HHHHHHHHHHhCCCEEEEecCCCC
Confidence 4555 8988876666442 1267999999986543 466677899999999999999984
No 358
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=96.25 E-value=0.009 Score=56.82 Aligned_cols=57 Identities=19% Similarity=0.307 Sum_probs=43.0
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+++. ||.+++-..+-|. .-|.||++||.+.... .|...++.|+.+||.|+.+|+||-
T Consensus 3 ~~~~-~g~~l~y~~~g~~----------~~~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~ 59 (275)
T 1a88_A 3 VTTS-DGTNIFYKDWGPR----------DGLPVVFHHGWPLSAD--DWDNQMLFFLSHGYRVIAHDRRGH 59 (275)
T ss_dssp EECT-TSCEEEEEEESCT----------TSCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEcc-CCCEEEEEEcCCC----------CCceEEEECCCCCchh--hHHHHHHHHHHCCceEEEEcCCcC
Confidence 4565 8988876665442 1267899999876543 466677899999999999999984
No 359
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=96.24 E-value=0.015 Score=61.18 Aligned_cols=64 Identities=16% Similarity=0.071 Sum_probs=49.3
Q ss_pred CccCCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 457 YFSLPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 457 ~~~~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.....+...++.. ||.+++....- ..|+||++||++.... .|....+.|+.+||.|+.+|+||.
T Consensus 233 ~~~~~~~~~~~~~-dg~~l~~~~~g------------~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~D~~G~ 296 (555)
T 3i28_A 233 NPSDMSHGYVTVK-PRVRLHFVELG------------SGPAVCLCHGFPESWY--SWRYQIPALAQAGYRVLAMDMKGY 296 (555)
T ss_dssp CGGGSEEEEEEEE-TTEEEEEEEEC------------SSSEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTS
T ss_pred CCcccceeEEEeC-CCcEEEEEEcC------------CCCEEEEEeCCCCchh--HHHHHHHHHHhCCCEEEEecCCCC
Confidence 3445566777887 99998854431 2388999999986653 567788999999999999999984
No 360
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=96.22 E-value=0.003 Score=67.28 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=38.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCc-cChHHHHHHh------cCcEEEEeCCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGI-LNLSIQYWTS------RGWAFVDVNYGGST 536 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~-~~~~~Q~~as------rGyaVl~~NyRGSt 536 (548)
|.. +..+|.|.+. . +++++|+||++|||....-... ++. +.|+. .|++|+.+|||.+.
T Consensus 96 dcl--~l~v~~P~~~--~--~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~l~~~~~~~~~~~vvv~~nYRl~~ 160 (534)
T 1llf_A 96 DCL--TINVVRPPGT--K--AGANLPVMLWIFGGGFEIGSPTIFPP--AQMVTKSVLMGKPIIHVAVNYRVAS 160 (534)
T ss_dssp CCC--EEEEEECTTC--C--TTCCEEEEEEECCSTTTSCCGGGSCC--HHHHHHHHHTTCCCEEEEECCCCHH
T ss_pred CCe--EEEEEECCCC--C--CCCCceEEEEEeCCCcccCCCcccCc--hHHHHHHHhcCCCEEEEEeCCCCCC
Confidence 664 4567788642 1 2567899999999986543222 332 33333 58999999999653
No 361
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.17 E-value=0.43 Score=46.06 Aligned_cols=141 Identities=14% Similarity=0.157 Sum_probs=78.2
Q ss_pred ECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCC
Q 008927 153 FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (548)
Q Consensus 153 ~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~ 232 (548)
.++.|++.. .++.|++++.++ ......... ......+..+++|.. ++ ... ...|+.+|.+ |+
T Consensus 106 ~~~~l~v~t-~~~~l~~~d~~g--~~~~~~~~~----~~~~~~~~~~~~g~l-~v-gt~--------~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 106 FEDILYVTS-MDGHLYAINTDG--TEKWRFKTK----KAIYATPIVSEDGTI-YV-GSN--------DNYLYAINPD-GT 167 (330)
T ss_dssp ETTEEEEEC-TTSEEEEECTTS--CEEEEEECS----SCCCSCCEECTTSCE-EE-ECT--------TSEEEEECTT-SC
T ss_pred ECCEEEEEe-cCCEEEEEcCCC--CEEEEEcCC----CceeeeeEEcCCCEE-EE-EcC--------CCEEEEECCC-CC
Confidence 466666543 456899998874 322222221 112445667777763 33 222 1469999998 65
Q ss_pred ccCcE-EeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcC
Q 008927 233 IQEPK-VLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSK 311 (548)
Q Consensus 233 ~~~~~-~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspD 311 (548)
.. ...........+...+||. +|+.. ..|+.++ . +|+. ........ ..+..+...+|
T Consensus 168 ---~~~~~~~~~~~~~~~~~d~~g~--l~v~t---------~~l~~~d-~-~g~~--~~~~~~~~----~~~~~~~~~~~ 225 (330)
T 3hxj_A 168 ---EKWRFKTNDAITSAASIGKDGT--IYFGS---------DKVYAIN-P-DGTE--KWNFYAGY----WTVTRPAISED 225 (330)
T ss_dssp ---EEEEEECSSCCCSCCEECTTCC--EEEES---------SSEEEEC-T-TSCE--EEEECCSS----CCCSCCEECTT
T ss_pred ---EeEEEecCCCceeeeEEcCCCE--EEEEe---------CEEEEEC-C-CCcE--EEEEccCC----cceeceEECCC
Confidence 32 2322233455677777886 34552 3588888 4 3531 12222211 34667788888
Q ss_pred CcEEEEEeCCCCeeeEEEEeccCCee
Q 008927 312 GELFFVTDRKNGFWNLHKWIESNNEV 337 (548)
Q Consensus 312 G~L~~~sd~~~g~~~Ly~~d~~~g~~ 337 (548)
|.|++.+.. . .|+.++..+...
T Consensus 226 g~l~v~t~~-~---gl~~~~~~g~~~ 247 (330)
T 3hxj_A 226 GTIYVTSLD-G---HLYAINPDGTEK 247 (330)
T ss_dssp SCEEEEETT-T---EEEEECTTSCEE
T ss_pred CeEEEEcCC-C---eEEEECCCCCEe
Confidence 887776653 2 578888644443
No 362
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.16 E-value=0.027 Score=59.92 Aligned_cols=147 Identities=8% Similarity=0.034 Sum_probs=77.1
Q ss_pred CeEEEEeCCCCCCCc-eecCCCCCCCCceecceeeCCCCCEEEEEEeccCCC----------------------------
Q 008927 165 QRLYKHSIDSKDSSP-LPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQD---------------------------- 215 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~-~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~---------------------------- 215 (548)
+.+-++|.++ .+. .+|.-+ .+......||||++++..+++....
T Consensus 175 ~~vtvID~~t--~~v~~qI~Vg-----g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 175 NVFTAVDADK--WEVAWQVLVS-----GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp EEEEEEETTT--TEEEEEEEES-----SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred ceEEEEECCC--CeEEEEEEeC-----CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 3677888875 332 333322 1234567999999977766543110
Q ss_pred -CCCceeEEEEEECCC--CCccCc--EEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCC-----Cc
Q 008927 216 -ALNSTTEIVAIALNG--QNIQEP--KVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISEN-----GD 285 (548)
Q Consensus 216 -~~~~~~~l~~idl~~--g~~~~~--~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~-----g~ 285 (548)
.....+.+-+||.++ +. . ..+..+.. -....+|||||+++ ++ +. ....+.++|++.. |+
T Consensus 248 Gk~~~i~~V~VID~~~~~~~---~~~~~Ipvg~~-PhGv~~sPDGk~v~-V~-~~-----~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASS---LFTRYIPIANN-PHGCNMAPDKKHLC-VA-GK-----LSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp TCSEEETTEEEEECSGGGCC---SSEEEEEEESS-CCCEEECTTSSEEE-EE-CT-----TSSBEEEEEGGGHHHHHHSC
T ss_pred CCeeEECcEEEEeCcccCCc---eeEEEEecCCC-ceEEEEcCCCCEEE-Ee-CC-----CCCeEEEEECcccccccccc
Confidence 001123477788877 43 2 23333322 22347999999875 55 22 2467999998731 11
Q ss_pred eeee-EEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccC
Q 008927 286 VYKR-VCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESN 334 (548)
Q Consensus 286 ~~~~-~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~ 334 (548)
+... ..+..-..+ .......|+||| .+|++..-++ ++.+++.++
T Consensus 317 l~~~~~v~~~v~vG--~gP~h~aF~~dG-~aY~t~~lds--qV~kwdi~~ 361 (595)
T 1fwx_A 317 ADPRSAVVAEPELG--LGPLHTAFDGRG-NAYTSLFLDS--QVVKWNIED 361 (595)
T ss_dssp CCGGGGEEECCBCC--SCEEEEEECTTS-EEEEEETTTT--EEEEEEHHH
T ss_pred cCcccceEEEcCCC--CCcceEEECCCC-eEEEEEecCC--cEEEEEhhH
Confidence 1110 011110001 234567899999 5555543233 455666654
No 363
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.15 E-value=0.043 Score=55.58 Aligned_cols=41 Identities=15% Similarity=0.133 Sum_probs=26.0
Q ss_pred CceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCc-EEEEEe
Q 008927 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGE-LFFVTD 319 (548)
Q Consensus 272 ~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~-L~~~sd 319 (548)
...|++.|+.. +.. ...+.+.. ..+....|+|||+ |+..++
T Consensus 338 Dg~V~lwd~~~-~~~--~~~~~~~~----~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 338 HGLIQLINTYE-KDS--NSIPIQLG----MPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp TTEEEEEETTC-TTC--CEEEEECS----SCEEEEEECTTSSEEEEEES
T ss_pred CCEEEEEECCC-CcE--EEEecCCC----CcEEEEEEcCCCCEEEEEeC
Confidence 35788889874 431 22223322 4578899999999 555554
No 364
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.13 E-value=0.93 Score=42.75 Aligned_cols=225 Identities=11% Similarity=0.057 Sum_probs=117.7
Q ss_pred CEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCcc
Q 008927 155 DTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQ 234 (548)
Q Consensus 155 ~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~ 234 (548)
+.|++....++.|++++.++ +.+.+.... .......+.++++|+. ++. ... ...|+++|.. ++
T Consensus 31 g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~--~~~~~~~i~~~~~g~l-~v~-~~~-------~~~v~~~d~~-g~-- 93 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQSG---RIKEFEVPT--PDAKVMCLIVSSLGDI-WFT-ENG-------ANKIGKLSKK-GG-- 93 (300)
T ss_dssp SCEEEEETTTTEEEEECTTS---CEEEEECSS--TTCCEEEEEECTTSCE-EEE-ETT-------TTEEEEECTT-SC--
T ss_pred CCEEEEcCCCCeEEEECCCC---ceEEEECCC--CCCcceeEEECCCCCE-EEE-ecC-------CCeEEEECCC-CC--
Confidence 35777766667899998763 333332110 0123445678898873 332 321 1469999988 65
Q ss_pred CcEEeee--cCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCC
Q 008927 235 EPKVLVS--GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKG 312 (548)
Q Consensus 235 ~~~~L~~--~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG 312 (548)
.+.+.. .........++++|+ | |+... ....|+.++.+ |++.. ..+.... .....+.+++||
T Consensus 94 -~~~~~~~~~~~~~~~i~~~~~g~-l-~v~~~------~~~~i~~~~~~--g~~~~-~~~~~~~----~~~~~i~~d~~g 157 (300)
T 2qc5_A 94 -FTEYPLPQPDSGPYGITEGLNGD-I-WFTQL------NGDRIGKLTAD--GTIYE-YDLPNKG----SYPAFITLGSDN 157 (300)
T ss_dssp -EEEEECSSTTCCEEEEEECSTTC-E-EEEET------TTTEEEEECTT--SCEEE-EECSSTT----CCEEEEEECTTS
T ss_pred -eEEecCCCCCCCCccceECCCCC-E-EEEcc------CCCeEEEECCC--CCEEE-ccCCCCC----CCceeEEECCCC
Confidence 443332 122344567888887 3 34422 13468888765 44221 1122111 334567788999
Q ss_pred cEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCc
Q 008927 313 ELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHS 392 (548)
Q Consensus 313 ~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~ 392 (548)
+||+.... . ..|++++. +++...+... .....| ....+. .++.|++... +...|+++|. +++
T Consensus 158 ~l~v~~~~-~--~~i~~~~~-~g~~~~~~~~-~~~~~~------~~i~~d----~~g~l~v~~~--~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 158 ALWFTENQ-N--NSIGRITN-TGKLEEYPLP-TNAAAP------VGITSG----NDGALWFVEI--MGNKIGRITT-TGE 219 (300)
T ss_dssp SEEEEETT-T--TEEEEECT-TCCEEEEECS-STTCCE------EEEEEC----TTSSEEEEET--TTTEEEEECT-TCC
T ss_pred CEEEEecC-C--CeEEEECC-CCcEEEeeCC-CCCCCc------ceEEEC----CCCCEEEEcc--CCCEEEEEcC-CCc
Confidence 86655432 2 36889988 6665543211 111111 112332 2345655432 2346888888 566
Q ss_pred eEeecCC--CceeEee--eecCCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 393 LSLLDIP--FTDIDNI--TLGNDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 393 ~~~l~~~--~~~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
...+..+ ......+ ++++ .+++... ....|++++. +++
T Consensus 220 ~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~---~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 220 ISEYDIPTPNARPHAITAGKNS-EIWFTEW---GANQIGRITN-DNT 261 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTT-CEEEEET---TTTEEEEECT-TSC
T ss_pred EEEEECCCCCCCceEEEECCCC-CEEEecc---CCCeEEEECC-CCc
Confidence 5554322 2333444 3344 4555432 2467888887 344
No 365
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=96.07 E-value=0.0039 Score=66.55 Aligned_cols=60 Identities=20% Similarity=0.306 Sum_probs=39.4
Q ss_pred ccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC-ccChHHHHHHh------cCcEEEEeCCCCCC
Q 008927 468 TEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-ILNLSIQYWTS------RGWAFVDVNYGGST 536 (548)
Q Consensus 468 s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~-~~~~~~Q~~as------rGyaVl~~NyRGSt 536 (548)
+. |...+ -+|.|.+. . +++++|+||++|||....-.. .++. +.|+. .|++|+.+|||.+.
T Consensus 102 se-dcl~l--~v~~P~~~--~--~~~~~Pviv~iHGGg~~~g~~~~~~~--~~l~~~~l~~~~~~vvv~~nYRl~~ 168 (544)
T 1thg_A 102 NE-DCLYL--NVFRPAGT--K--PDAKLPVMVWIYGGAFVYGSSAAYPG--NSYVKESINMGQPVVFVSINYRTGP 168 (544)
T ss_dssp CS-CCCEE--EEEEETTC--C--TTCCEEEEEEECCCTTCCSGGGGCCS--HHHHHHHHHTTCCCEEEEECCCCHH
T ss_pred CC-CCeEE--EEEeCCCC--C--CCCCCcEEEEECCCccccCCccccCc--hHHHHHHhhcCCCEEEEeCCCCCCc
Confidence 44 66554 56677542 1 256789999999998754332 2332 33443 38999999999765
No 366
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=96.07 E-value=0.0092 Score=57.52 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=44.5
Q ss_pred CeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccCh---HHHHHHhcCcEEEEeCCCCCCC
Q 008927 461 PELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNL---SIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 461 pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~---~~Q~~asrGyaVl~~NyRGStG 537 (548)
.+.+++.|...|.+++.++ +|. + .|+||++||++.......|.. ..++++++||+|+.||.+|+++
T Consensus 6 ~~~~~~~s~~~~~~~~v~~-~p~---~-------~~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~ 74 (280)
T 1dqz_A 6 VEYLQVPSASMGRDIKVQF-QGG---G-------PHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSF 74 (280)
T ss_dssp EEEEEEEETTTTEEEEEEE-ECC---S-------SSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCT
T ss_pred EEEEEEECcccCceeEEEE-cCC---C-------CCEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCcc
Confidence 3566777653577777664 342 2 258999999964222222321 2367888999999999998766
Q ss_pred CC
Q 008927 538 LS 539 (548)
Q Consensus 538 yG 539 (548)
|.
T Consensus 75 ~~ 76 (280)
T 1dqz_A 75 YT 76 (280)
T ss_dssp TS
T ss_pred cc
Confidence 53
No 367
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.02 E-value=2 Score=45.72 Aligned_cols=53 Identities=8% Similarity=-0.053 Sum_probs=32.8
Q ss_pred eEEEEEEECCCCceE-eecCCCcee-EeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 380 RSYLGILDDFGHSLS-LLDIPFTDI-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~-~l~~~~~~~-~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
...|+.+|+.+|++. ....+.... ..+...++.+++ .+ .-..|+.+|.++++.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~-g~---~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWY-AT---LDGYLKALDNKDGKE 497 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE-EC---TTSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEE-Ec---CCCeEEEEECCCCCE
Confidence 468999999999754 333222111 122445666655 33 247899999988874
No 368
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.00 E-value=2.1 Score=45.65 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=31.3
Q ss_pred eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE
Q 008927 324 FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS 394 (548)
Q Consensus 324 ~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~ 394 (548)
...|+.+|+.+|++.--.+.. .+.+. . .+.. .++.||+ ... ...|+.+|.++|++.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~----~~~~~---~--~~~t---~gg~v~~-g~~--dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK----FAAWG---G--TLYT---KGGLVWY-ATL--DGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES----SCCCS---B--CEEE---TTTEEEE-ECT--TSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCCEEEEecCC----CCccc---e--eEEE---CCCEEEE-EcC--CCeEEEEECCCCCEE
Confidence 357899998888764322211 11111 0 1111 4566655 333 347899999999764
No 369
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.99 E-value=0.88 Score=44.69 Aligned_cols=167 Identities=10% Similarity=0.038 Sum_probs=92.7
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCC----CCCCceecceee---CCCCCEEEEEEeccC-----CC
Q 008927 148 GAFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDY----GEPLVSYADGIF---DPRFNRYVTVREDRR-----QD 215 (548)
Q Consensus 148 ~~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~----~~~~~~~~~~~~---SpDG~~i~~v~~~~~-----~~ 215 (548)
..|-..+++++|++-..+.|+++++++ +....++... .++......+.| +|+|+ |+.+..... +.
T Consensus 18 ~~wd~~~g~~~vs~l~~g~V~~~~~~~--~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYKGRIEVYNPKT--QSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFADQ 94 (334)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTT--CCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTSC
T ss_pred ccCcCCCCEEEEEeccCCEEEEEcCCC--CeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEccccccccccc
Confidence 345455678999988889999999985 4444442210 111234567788 68854 444333210 00
Q ss_pred CCCceeEEEEEECC---CCCccCcEEeee------c-------C-CceeeeEECCCCCEEEEEEecCCCCCCCC-ceEEE
Q 008927 216 ALNSTTEIVAIALN---GQNIQEPKVLVS------G-------S-DFYAFPRMDPRGERMAWIEWHHPNMPWDK-AELWV 277 (548)
Q Consensus 216 ~~~~~~~l~~idl~---~g~~~~~~~L~~------~-------~-~~~~~p~~SPDGk~La~~~~~~~~~p~~~-~~L~v 277 (548)
.......|+++|+. +++ ...... + . .........++|. +|+.-.. . ..|+.
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~---~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn--aYVt~s~------~~~~I~r 163 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSK---PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN--SYVAFAL------GMPAIAR 163 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCC---CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC--EEEEEEE------SSCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCC---EEEEecCccccccccccccccccCCceeEECCCCC--EEEeCCC------CCCeEEE
Confidence 00124689999999 666 332221 1 1 1234667899998 4554222 2 46887
Q ss_pred EEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc
Q 008927 278 GYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 278 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
++.+ |+......+...............+.|||+++++.+. . ..|+++|+.
T Consensus 164 V~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~--g~L~~fD~~ 214 (334)
T 2p9w_A 164 VSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P--RALTAFDVS 214 (334)
T ss_dssp ECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S--SSEEEEECS
T ss_pred EeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C--CeEEEEcCC
Confidence 7765 4311111111111000023456789999996666654 3 469999986
No 370
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.96 E-value=0.15 Score=50.89 Aligned_cols=121 Identities=15% Similarity=0.048 Sum_probs=71.7
Q ss_pred EEEEEeCCC--C--eEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCC-C---------CCCcee
Q 008927 156 TVIFSNYKD--Q--RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQ-D---------ALNSTT 221 (548)
Q Consensus 156 ~i~F~~~~~--~--~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~-~---------~~~~~~ 221 (548)
+|+..+-.. . .||+++.++ +..+.+.........+..|....++|.. |+..++.- . ......
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~--~~~~~~~~~~g~~~~~pND~~v~~~G~f--yvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEE--KSLLHLKTIRHKLLPSVNDIVAVGPEHF--YATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTT--TEEEEEEEECCTTCSSEEEEEEEETTEE--EEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred EEEEEECCCCCCeEEEEEEECCC--CEEEEEeccccCCCCCCceEEEeCCCCE--EecCCcEeCCcccccchhhccCCcc
Confidence 455555332 2 588888765 4434333321112234667889999863 33333210 0 011347
Q ss_pred EEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEE
Q 008927 222 EIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCV 292 (548)
Q Consensus 222 ~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l 292 (548)
.||.+|. ++ .+++..+-.+-...+|||||+.|++.... ...|+.++++.+|++...+.+
T Consensus 204 ~vyr~d~--~~---~~~~~~~l~~pNGia~spDg~~lYvadt~-------~~~I~~~~~~~~g~l~~~~~~ 262 (355)
T 3sre_A 204 FVTYYSP--ND---VRVVAEGFDFANGINISPDGKYVYIAELL-------AHKIHVYEKHANWTLTPLRVL 262 (355)
T ss_dssp EEEEECT--TC---CEEEEEEESSEEEEEECTTSSEEEEEEGG-------GTEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEEC--Ce---EEEeecCCcccCcceECCCCCEEEEEeCC-------CCeEEEEEECCCCcEecCEEE
Confidence 8999987 35 67776665555678999999988755421 458999999866765444444
No 371
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.94 E-value=0.2 Score=49.84 Aligned_cols=55 Identities=11% Similarity=0.007 Sum_probs=31.6
Q ss_pred ceeeCC---CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCc---eeeeEECCCCCEEEE
Q 008927 195 DGIFDP---RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDF---YAFPRMDPRGERMAW 260 (548)
Q Consensus 195 ~~~~Sp---DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~---~~~p~~SPDGk~La~ 260 (548)
...||| |+..|+-...| ..|.++|+++|+. .+.|..+... ...-.|||||+.++.
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D---------~TIkIWDl~TGk~--l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIM---------NNIVIWNLKTGQL--LKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEEEETSTTEEEEEETT---------SEEEEEETTTCCE--EEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred eEEeeccCCCCceEEEecCC---------CcEEEEECCCCcE--EEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 445666 55665554333 4688889999972 3444432221 223368999987753
No 372
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=95.91 E-value=0.0026 Score=68.10 Aligned_cols=41 Identities=27% Similarity=0.300 Sum_probs=31.1
Q ss_pred CcEEEEEccCccccccCcc-ChHHHHHHhcCcEEEEeCCCCC
Q 008927 495 PPLLVKSHGGPTSEARGIL-NLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~~-~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|+||++|||....-.... ....++|+++|++|+.+|||.+
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~ 156 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLN 156 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCH
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCC
Confidence 8999999999864433221 2345678999999999999953
No 373
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.89 E-value=1.6 Score=43.28 Aligned_cols=227 Identities=12% Similarity=0.083 Sum_probs=112.4
Q ss_pred eEEECCEEEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEEC
Q 008927 150 FRIFGDTVIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIAL 228 (548)
Q Consensus 150 ~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl 228 (548)
...+++.|++.. .++.|+.++.++ |+.+ ..... ......+... + ..|++. .. ...|+.+|+
T Consensus 99 ~~~~~~~v~v~~-~~g~l~a~d~~t--G~~~W~~~~~----~~~~~~p~~~-~-~~v~v~-~~--------~g~l~~~d~ 160 (376)
T 3q7m_A 99 VTVSGGHVYIGS-EKAQVYALNTSD--GTVAWQTKVA----GEALSRPVVS-D-GLVLIH-TS--------NGQLQALNE 160 (376)
T ss_dssp EEEETTEEEEEE-TTSEEEEEETTT--CCEEEEEECS----SCCCSCCEEE-T-TEEEEE-CT--------TSEEEEEET
T ss_pred ceEeCCEEEEEc-CCCEEEEEECCC--CCEEEEEeCC----CceEcCCEEE-C-CEEEEE-cC--------CCeEEEEEC
Confidence 345677777654 457899999876 5443 22111 0112233333 3 344442 22 147999999
Q ss_pred CCCCccCcEEeeecCC-c-----eeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCc---
Q 008927 229 NGQNIQEPKVLVSGSD-F-----YAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI--- 299 (548)
Q Consensus 229 ~~g~~~~~~~L~~~~~-~-----~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~--- 299 (548)
++|+ ...-..... . ...|... +| .| |+.. ....|+.++.+ +|+..-...+.... ..
T Consensus 161 ~tG~---~~W~~~~~~~~~~~~~~~~~~~~-~~-~v-~~g~-------~~g~l~~~d~~-tG~~~w~~~~~~~~-~~~~~ 225 (376)
T 3q7m_A 161 ADGA---VKWTVNLDMPSLSLRGESAPTTA-FG-AA-VVGG-------DNGRVSAVLME-QGQMIWQQRISQAT-GSTEI 225 (376)
T ss_dssp TTCC---EEEEEECCC-----CCCCCCEEE-TT-EE-EECC-------TTTEEEEEETT-TCCEEEEEECCC--------
T ss_pred CCCc---EEEEEeCCCCceeecCCCCcEEE-CC-EE-EEEc-------CCCEEEEEECC-CCcEEEEEecccCC-CCccc
Confidence 9987 332222211 1 1344444 33 34 3431 13578888887 35421111111100 00
Q ss_pred ---ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEE
Q 008927 300 ---VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR 376 (548)
Q Consensus 300 ---~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~ 376 (548)
......|.. .++.+|+.+.. | .|+.+|+++|+..--.+. . .. ..+.. +++.|++...
T Consensus 226 ~~~~~~~~~p~~-~~~~v~~~~~~--g--~l~~~d~~tG~~~w~~~~----~--~~------~~~~~---~~~~l~~~~~ 285 (376)
T 3q7m_A 226 DRLSDVDTTPVV-VNGVVFALAYN--G--NLTALDLRSGQIMWKREL----G--SV------NDFIV---DGNRIYLVDQ 285 (376)
T ss_dssp ----CCCCCCEE-ETTEEEEECTT--S--CEEEEETTTCCEEEEECC----C--CE------EEEEE---ETTEEEEEET
T ss_pred ccccccCCCcEE-ECCEEEEEecC--c--EEEEEECCCCcEEeeccC----C--CC------CCceE---ECCEEEEEcC
Confidence 001123333 24446555432 2 688999988875432211 0 00 01111 4667766542
Q ss_pred eCCeEEEEEEECCCCceEee-c-CCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 377 QNGRSYLGILDDFGHSLSLL-D-IPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 377 ~~g~~~L~~~dl~~g~~~~l-~-~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
...|+.+|.++|+..-- . .+...+......++.+++... ...|+.+|+++++.
T Consensus 286 ---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~----~g~l~~~d~~tG~~ 340 (376)
T 3q7m_A 286 ---NDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDS----EGYLHWINVEDGRF 340 (376)
T ss_dssp ---TCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECT----TSEEEEEETTTCCE
T ss_pred ---CCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeC----CCeEEEEECCCCcE
Confidence 23589999999976422 2 122222223345677765532 36899999988874
No 374
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.86 E-value=1 Score=46.26 Aligned_cols=158 Identities=10% Similarity=0.115 Sum_probs=86.6
Q ss_pred cceeeCCC--CCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCC
Q 008927 194 ADGIFDPR--FNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWD 271 (548)
Q Consensus 194 ~~~~~SpD--G~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~ 271 (548)
..+.|+|+ +..|+++ ... ..|+++|++++. .+.+......-...++++||+ |++..+.... .
T Consensus 142 ~gvavd~~s~~g~Lyv~-D~~--------~~I~~id~~~g~---v~~~~~~~~~P~giavd~dG~-lyVad~~~~~---~ 205 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWV-GQR--------DAFRHVDFVNQY---VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSD---T 205 (433)
T ss_dssp CEEEECTTTTTCEEEEE-CBT--------SCEEEEETTTTE---EEEECCCCSCEEEEEECTTCC-EEEEECCSCT---T
T ss_pred ceEEEccccCCCEEEEE-eCC--------CCEEEEECCCCE---EEEeecCCCCccEEEECCCCC-EEEEcCCCCc---c
Confidence 35679995 5555443 321 479999998887 666654433445678999999 5443321110 1
Q ss_pred CceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc-CCcEEEEEeCCCCeeeEEEEeccCCee-EeecccccccCC
Q 008927 272 KAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEFSR 349 (548)
Q Consensus 272 ~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp-DG~L~~~sd~~~g~~~Ly~~d~~~g~~-~~l~~~~~d~~~ 349 (548)
...++.++.. +.......+... .......++| +|.||+. |. +...|+++++++++. +.+... ..
T Consensus 206 ~~gv~~~~~~--~~~~~~~~~~~~-----~~P~giavd~~~G~lyv~-d~--~~~~V~~~d~~~g~~~~~~~~~----~~ 271 (433)
T 4hw6_A 206 NTGIYLFTRA--SGFTERLSLCNA-----RGAKTCAVHPQNGKIYYT-RY--HHAMISSYDPATGTLTEEEVMM----DT 271 (433)
T ss_dssp SEEEEEECGG--GTTCCEEEEEEC-----SSBCCCEECTTTCCEEEC-BT--TCSEEEEECTTTCCEEEEEEEC----SC
T ss_pred cceEEEEECC--CCeecccccccc-----CCCCEEEEeCCCCeEEEE-EC--CCCEEEEEECCCCeEEEEEecc----CC
Confidence 2335555443 221111222221 2345678889 5656654 43 224799999987776 444321 11
Q ss_pred CcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC
Q 008927 350 PLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF 389 (548)
Q Consensus 350 p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~ 389 (548)
..|.. ...+.| +++.||++- .+...|++++.+
T Consensus 272 ~~~~~---~ia~dp---dG~~LYvad--~~~~~I~~~~~d 303 (433)
T 4hw6_A 272 KGSNF---HIVWHP---TGDWAYIIY--NGKHCIYRVDYN 303 (433)
T ss_dssp CSSCE---EEEECT---TSSEEEEEE--TTTTEEEEEEBC
T ss_pred CCCcc---cEEEeC---CCCEEEEEe--CCCCEEEEEeCC
Confidence 12211 244543 677777654 344567787754
No 375
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=95.84 E-value=0.017 Score=54.80 Aligned_cols=55 Identities=20% Similarity=0.357 Sum_probs=40.8
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+++. ||.+++-..+ + .-|.||++||.+.... .|...++.|+++||.|+.+|+||-
T Consensus 3 ~~~~-~g~~l~y~~~-----------g-~~~~vvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~G~ 57 (273)
T 1a8s_A 3 FTTR-DGTQIYYKDW-----------G-SGQPIVFSHGWPLNAD--SWESQMIFLAAQGYRVIAHDRRGH 57 (273)
T ss_dssp EECT-TSCEEEEEEE-----------S-CSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred EecC-CCcEEEEEEc-----------C-CCCEEEEECCCCCcHH--HHhhHHhhHhhCCcEEEEECCCCC
Confidence 4565 8888764332 1 1267999999986543 466677899999999999999984
No 376
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=95.81 E-value=0.022 Score=56.81 Aligned_cols=55 Identities=25% Similarity=0.335 Sum_probs=43.7
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++.+..-|.+ +..|.||++||.+.... .|....+.|+++||.|+.+|+||.
T Consensus 11 ~g~~l~y~~~G~~~--------~~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~vi~~d~~g~ 65 (356)
T 2e3j_A 11 RGTRIHAVADSPPD--------QQGPLVVLLHGFPESWY--SWRHQIPALAGAGYRVVAIDQRGY 65 (356)
T ss_dssp TTEEEEEEEECCTT--------CCSCEEEEECCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTS
T ss_pred CCeEEEEEEecCCC--------CCCCEEEEECCCCCcHH--HHHHHHHHHHHcCCEEEEEcCCCC
Confidence 89999988877632 23488999999986543 466677889999999999999984
No 377
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.74 E-value=1.8 Score=43.74 Aligned_cols=189 Identities=9% Similarity=0.077 Sum_probs=100.3
Q ss_pred eeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeee-cCCceeeeEECCCCCEEEEEEecCCCCCCCCceE
Q 008927 197 IFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVS-GSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAEL 275 (548)
Q Consensus 197 ~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~-~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L 275 (548)
.+++||+.|+....+ ..|.++|+.+++ ...... ....+....| ||+.|+-.. . ...|
T Consensus 138 ~~~~d~~~l~~g~~d---------g~i~iwd~~~~~---~~~~~~~h~~~v~~l~~--~~~~l~sg~-~-------dg~i 195 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD---------NTIKIWDKNTLE---CKRILTGHTGSVLCLQY--DERVIITGS-S-------DSTV 195 (435)
T ss_dssp EEECCSSEEEEEESS---------SCEEEEESSSCC---EEEEECCCSSCEEEEEC--CSSEEEEEE-T-------TSCE
T ss_pred EEEECCCEEEEEeCC---------CeEEEEeCCCCe---EEEEEcCCCCcEEEEEE--CCCEEEEEc-C-------CCeE
Confidence 456688887775433 358888998887 443333 3333444444 888776443 1 3468
Q ss_pred EEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCccccc
Q 008927 276 WVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFG 355 (548)
Q Consensus 276 ~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~ 355 (548)
.+.++.. ++. ...+.+.. ..+....|++ .+++.... +| .|..+|+.+++...+..... +....+
T Consensus 196 ~vwd~~~-~~~--~~~~~~h~----~~v~~l~~~~--~~l~s~s~-dg--~i~vwd~~~~~~~~~~~~~~--~~~~~v-- 259 (435)
T 1p22_A 196 RVWDVNT-GEM--LNTLIHHC----EAVLHLRFNN--GMMVTCSK-DR--SIAVWDMASPTDITLRRVLV--GHRAAV-- 259 (435)
T ss_dssp EEEESSS-CCE--EEEECCCC----SCEEEEECCT--TEEEEEET-TS--CEEEEECSSSSCCEEEEEEC--CCSSCE--
T ss_pred EEEECCC-CcE--EEEEcCCC----CcEEEEEEcC--CEEEEeeC-CC--cEEEEeCCCCCCceeeeEec--CCCCcE--
Confidence 8889884 542 33344433 4566677753 34444444 44 45666766654321110000 001111
Q ss_pred CcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCceeEeeeecCCEEEEEEecCCCCCeEEEEEcCCC
Q 008927 356 INSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDIDNITLGNDCLFVEGASGVEPSSVAKVTLDDH 434 (548)
Q Consensus 356 ~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~ 434 (548)
..+.+ +++.|+ +...++ .|.++|+.+++.. .+......+..+..+++.++ +++. ...|.++|+.++
T Consensus 260 -~~~~~-----~~~~l~-s~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~g~~---dg~i~iwd~~~~ 326 (435)
T 1p22_A 260 -NVVDF-----DDKYIV-SASGDR--TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV-SGSS---DNTIRLWDIECG 326 (435)
T ss_dssp -EEEEE-----ETTEEE-EEETTS--EEEEEETTTCCEEEEEECCSSCEEEEEEETTEEE-EEET---TSCEEEEETTTC
T ss_pred -EEEEe-----CCCEEE-EEeCCC--eEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEE-EEeC---CCeEEEEECCCC
Confidence 11233 455554 444444 4667788877643 44433334555555666544 3332 357888998877
Q ss_pred ce
Q 008927 435 KL 436 (548)
Q Consensus 435 ~~ 436 (548)
+.
T Consensus 327 ~~ 328 (435)
T 1p22_A 327 AC 328 (435)
T ss_dssp CE
T ss_pred CE
Confidence 53
No 378
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=95.73 E-value=0.03 Score=54.17 Aligned_cols=62 Identities=21% Similarity=0.212 Sum_probs=43.7
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGy 538 (548)
+...++. +|.+++.+..-|. ..|.||++||++.... .|...++.|+. ||.|+.+|+||..|.
T Consensus 46 ~~~~v~~--~~~~~~~~~~g~~----------~~~~vv~lHG~~~~~~--~~~~~~~~L~~-g~~vi~~D~~G~gG~ 107 (306)
T 2r11_A 46 KSFYIST--RFGQTHVIASGPE----------DAPPLVLLHGALFSST--MWYPNIADWSS-KYRTYAVDIIGDKNK 107 (306)
T ss_dssp EEEEECC--TTEEEEEEEESCT----------TSCEEEEECCTTTCGG--GGTTTHHHHHH-HSEEEEECCTTSSSS
T ss_pred ceEEEec--CCceEEEEeeCCC----------CCCeEEEECCCCCCHH--HHHHHHHHHhc-CCEEEEecCCCCCCC
Confidence 4455555 5667777664431 2378999999986554 36666778887 999999999996443
No 379
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=95.72 E-value=0.0055 Score=56.48 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=41.0
Q ss_pred EeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 465 EFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 465 ~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
.+... +| +..++|.|. + +.|+||++||+..... .|....+.|+++||.|+.+|+||..
T Consensus 6 ~~~~~-~g--~~~~~~~~~--------~-~~~~vv~~hG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g 63 (238)
T 1ufo_A 6 ERLTL-AG--LSVLARIPE--------A-PKALLLALHGLQGSKE--HILALLPGYAERGFLLLAFDAPRHG 63 (238)
T ss_dssp EEEEE-TT--EEEEEEEES--------S-CCEEEEEECCTTCCHH--HHHHTSTTTGGGTEEEEECCCTTST
T ss_pred ccccc-CC--EEEEEEecC--------C-CccEEEEECCCcccch--HHHHHHHHHHhCCCEEEEecCCCCc
Confidence 33443 66 455677773 2 4599999999975443 3444567789999999999999853
No 380
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=95.69 E-value=0.0041 Score=62.93 Aligned_cols=68 Identities=10% Similarity=0.031 Sum_probs=48.0
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHH----hcCc---EEEEeCCCCC
Q 008927 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWT----SRGW---AFVDVNYGGS 535 (548)
Q Consensus 464 i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~a----srGy---aVl~~NyRGS 535 (548)
.++.+. ||.+++...+.|.+... .++.++.|+||++||.+.... .|...++.|+ ..|| .|+.+|+||.
T Consensus 23 ~~~~~~-dg~~l~~~~~g~~~~~~-~~~~~~~~~vvllHG~~~~~~--~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~ 97 (398)
T 2y6u_A 23 STLCAT-DRLELTYDVYTSAERQR-RSRTATRLNLVFLHGSGMSKV--VWEYYLPRLVAADAEGNYAIDKVLLIDQVNH 97 (398)
T ss_dssp SBSSTT-CCCEEEEEEEEESCTTT-CCTTCEEEEEEEECCTTCCGG--GGGGGGGGSCCCBTTTTEEEEEEEEECCTTS
T ss_pred ccccCC-CceEEEEEEEecCCCCC-CCCCCCCCeEEEEcCCCCcHH--HHHHHHHHHHHhhhhcCcceeEEEEEcCCCC
Confidence 446676 99999999998753100 001234489999999986554 4556677888 4599 9999999983
No 381
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.63 E-value=1.1 Score=43.09 Aligned_cols=167 Identities=12% Similarity=0.099 Sum_probs=84.1
Q ss_pred eEEEEEECCCCCccCcEE-eeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCc
Q 008927 221 TEIVAIALNGQNIQEPKV-LVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTI 299 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~-L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~ 299 (548)
..|+.+|.+ |+ ... ..........+...+||+ | |+... ...|+.++.+ |+. ........
T Consensus 117 ~~l~~~d~~-g~---~~~~~~~~~~~~~~~~~~~~g~-l-~vgt~-------~~~l~~~d~~--g~~--~~~~~~~~--- 176 (330)
T 3hxj_A 117 GHLYAINTD-GT---EKWRFKTKKAIYATPIVSEDGT-I-YVGSN-------DNYLYAINPD--GTE--KWRFKTND--- 176 (330)
T ss_dssp SEEEEECTT-SC---EEEEEECSSCCCSCCEECTTSC-E-EEECT-------TSEEEEECTT--SCE--EEEEECSS---
T ss_pred CEEEEEcCC-CC---EEEEEcCCCceeeeeEEcCCCE-E-EEEcC-------CCEEEEECCC--CCE--eEEEecCC---
Confidence 469999988 65 322 222333455677888887 3 44421 3578888876 432 11122111
Q ss_pred ccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 300 VESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 300 ~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
..+..+...++|.|++.+ ..|+.++ .+++...-..... .. ....... .++.|++.. .+
T Consensus 177 -~~~~~~~~d~~g~l~v~t------~~l~~~d-~~g~~~~~~~~~~----~~----~~~~~~~----~~g~l~v~t-~~- 234 (330)
T 3hxj_A 177 -AITSAASIGKDGTIYFGS------DKVYAIN-PDGTEKWNFYAGY----WT----VTRPAIS----EDGTIYVTS-LD- 234 (330)
T ss_dssp -CCCSCCEECTTCCEEEES------SSEEEEC-TTSCEEEEECCSS----CC----CSCCEEC----TTSCEEEEE-TT-
T ss_pred -CceeeeEEcCCCEEEEEe------CEEEEEC-CCCcEEEEEccCC----cc----eeceEEC----CCCeEEEEc-CC-
Confidence 345667777888877665 3588888 4554332111100 00 0111221 234565543 22
Q ss_pred eEEEEEEECCCCceEeecCCCceeEeeeec-CCEEEEEEecCCCCCeEEEEEcCCCc
Q 008927 380 RSYLGILDDFGHSLSLLDIPFTDIDNITLG-NDCLFVEGASGVEPSSVAKVTLDDHK 435 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~~l~~~~~~~~~~s~d-~~~l~~~~ss~~~p~~l~~~d~~~~~ 435 (548)
..|+.+|..+........+......+..+ ++.|++... ...|+++|. +++
T Consensus 235 -~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~----~ggl~~~d~-~g~ 285 (330)
T 3hxj_A 235 -GHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSY----DGHLYAINP-DGT 285 (330)
T ss_dssp -TEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECT----TCEEEEECT-TSC
T ss_pred -CeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecC----CCCEEEECC-CCc
Confidence 24777776444444443322222222223 556655432 247999986 444
No 382
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=95.47 E-value=0.02 Score=59.53 Aligned_cols=57 Identities=14% Similarity=0.063 Sum_probs=42.6
Q ss_pred EEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 464 IEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 464 i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+.+.+. ||..++-... + ..|.||++||++.... .|....+.|+++||.|+.+|+||.
T Consensus 6 ~~~~~~-dG~~l~y~~~-----------G-~gp~VV~lHG~~~~~~--~~~~l~~~La~~Gy~Vi~~D~rG~ 62 (456)
T 3vdx_A 6 VGQENS-TSIDLYYEDH-----------G-TGVPVVLIHGFPLSGH--SWERQSAALLDAGYRVITYDRRGF 62 (456)
T ss_dssp EEEETT-EEEEEEEEEE-----------S-SSEEEEEECCTTCCGG--GGTTHHHHHHHHTEEEEEECCTTS
T ss_pred eccccc-CCeEEEEEEe-----------C-CCCEEEEECCCCCcHH--HHHHHHHHHHHCCcEEEEECCCCC
Confidence 445565 8888773322 1 2388999999987554 466778999999999999999984
No 383
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=95.45 E-value=0.028 Score=53.21 Aligned_cols=55 Identities=20% Similarity=0.348 Sum_probs=40.6
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
|.+. ||.+|+-..+- +. |.||++||.+.... .|...++.|+++||.|+.+|+||-
T Consensus 3 ~~~~-~g~~l~y~~~G-----------~g-~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~ 57 (271)
T 3ia2_A 3 FVAK-DGTQIYFKDWG-----------SG-KPVLFSHGWLLDAD--MWEYQMEYLSSRGYRTIAFDRRGF 57 (271)
T ss_dssp EECT-TSCEEEEEEES-----------SS-SEEEEECCTTCCGG--GGHHHHHHHHTTTCEEEEECCTTS
T ss_pred EEcC-CCCEEEEEccC-----------CC-CeEEEECCCCCcHH--HHHHHHHHHHhCCceEEEecCCCC
Confidence 5566 89888754432 12 45788999876543 466677889999999999999983
No 384
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=95.43 E-value=0.024 Score=54.27 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=46.3
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
..+...+.+. ||.+++...+-+.+ .-|.||++||.+.... .|...+..|++ ||.|+.+|.||-
T Consensus 4 ~~~~~~~~~~-~g~~l~~~~~g~~~---------~~~~vvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~Dl~G~ 66 (285)
T 3bwx_A 4 EYEDRYWTSS-DGLRLHFRAYEGDI---------SRPPVLCLPGLTRNAR--DFEDLATRLAG-DWRVLCPEMRGR 66 (285)
T ss_dssp SSEEEEEECT-TSCEEEEEEECBCT---------TSCCEEEECCTTCCGG--GGHHHHHHHBB-TBCEEEECCTTB
T ss_pred ccccCeeecC-CCceEEEEEcCCCC---------CCCcEEEECCCCcchh--hHHHHHHHhhc-CCEEEeecCCCC
Confidence 3456677776 99999988875521 1266899999886543 45666677766 999999999984
No 385
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=95.36 E-value=0.01 Score=58.83 Aligned_cols=50 Identities=16% Similarity=0.263 Sum_probs=36.6
Q ss_pred EEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccC-------hHHHHHHhcCcEEEEeCCCC
Q 008927 475 AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-------LSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 475 i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~-------~~~Q~~asrGyaVl~~NyRG 534 (548)
++..++.|.+ .++ |.||++||+..... .|. ...+.|+++||.|+.+|+||
T Consensus 50 ~~~~~~~p~~-------~~~-~~vvl~HG~g~~~~--~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G 106 (328)
T 1qlw_A 50 MYVRYQIPQR-------AKR-YPITLIHGCCLTGM--TWETTPDGRMGWDEYFLRKGYSTYVIDQSG 106 (328)
T ss_dssp EEEEEEEETT-------CCS-SCEEEECCTTCCGG--GGSSCTTSCCCHHHHHHHTTCCEEEEECTT
T ss_pred EEEEEEccCC-------CCC-ccEEEEeCCCCCCC--ccccCCCCchHHHHHHHHCCCeEEEECCCC
Confidence 5556667743 123 66899999975443 344 47789999999999999998
No 386
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=95.30 E-value=0.029 Score=52.36 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=40.1
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+... ||.+++....-+ -|.||++||++.... .|....+.|+ +||.|+.+|+||-
T Consensus 7 ~~~~-~g~~l~~~~~g~------------~~~vv~lHG~~~~~~--~~~~~~~~l~-~~~~vi~~d~~G~ 60 (262)
T 3r0v_A 7 VPSS-DGTPIAFERSGS------------GPPVVLVGGALSTRA--GGAPLAERLA-PHFTVICYDRRGR 60 (262)
T ss_dssp EECT-TSCEEEEEEEEC------------SSEEEEECCTTCCGG--GGHHHHHHHT-TTSEEEEECCTTS
T ss_pred EEcC-CCcEEEEEEcCC------------CCcEEEECCCCcChH--HHHHHHHHHh-cCcEEEEEecCCC
Confidence 4555 898888555321 267999999987654 3566677787 9999999999984
No 387
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=95.30 E-value=0.014 Score=54.71 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=33.2
Q ss_pred CCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
..|.||++||.+.+.. .|....+.|+++||.|+.+|+||-
T Consensus 11 ~~~~vvllHG~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~ 50 (267)
T 3sty_A 11 VKKHFVLVHAAFHGAW--CWYKIVALMRSSGHNVTALDLGAS 50 (267)
T ss_dssp CCCEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred CCCeEEEECCCCCCcc--hHHHHHHHHHhcCCeEEEeccccC
Confidence 4589999999986543 466778899999999999999984
No 388
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=95.27 E-value=0.034 Score=52.64 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=40.5
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+++. ||.+++...+- .-|.||++||.+.... .|...++.|+.+||.|+.+|+||-
T Consensus 3 ~~~~-~g~~l~y~~~g------------~g~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~ 57 (274)
T 1a8q_A 3 CTTR-DGVEIFYKDWG------------QGRPVVFIHGWPLNGD--AWQDQLKAVVDAGYRGIAHDRRGH 57 (274)
T ss_dssp EECT-TSCEEEEEEEC------------SSSEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred EEcc-CCCEEEEEecC------------CCceEEEECCCcchHH--HHHHHHHHHHhCCCeEEEEcCCCC
Confidence 4565 88887644331 1267999999986543 466677889999999999999983
No 389
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=95.25 E-value=0.011 Score=61.07 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=30.7
Q ss_pred CcEEEEEccCccccccCc-cChHH---HHHHhcCcEEEEeCCCCC
Q 008927 495 PPLLVKSHGGPTSEARGI-LNLSI---QYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~-~~~~~---Q~~asrGyaVl~~NyRGS 535 (548)
-|.||++||.+....... |...+ +.|+++||.|+.+|.||+
T Consensus 109 ~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~ 153 (444)
T 2vat_A 109 DNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS 153 (444)
T ss_dssp CCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC
T ss_pred CCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC
Confidence 488999999987765422 33333 257789999999999995
No 390
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=95.24 E-value=0.014 Score=53.96 Aligned_cols=43 Identities=14% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCCC
Q 008927 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGL 538 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGy 538 (548)
..|.||++||.+.... .|....+.|+++||.|+.+|+||...-
T Consensus 21 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s 63 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPN--DMNFMARALQRSGYGVYVPLFSGHGTV 63 (251)
T ss_dssp SSEEEEEECCTTCCGG--GGHHHHHHHHHTTCEEEECCCTTCSSS
T ss_pred CCceEEEeCCCCCCHH--HHHHHHHHHHHCCCEEEecCCCCCCCC
Confidence 4588899999876554 466778899999999999999986543
No 391
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.51 Score=49.85 Aligned_cols=157 Identities=4% Similarity=-0.068 Sum_probs=82.3
Q ss_pred eecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCCceeee--EECCCC-CEEEEEEecCCCC
Q 008927 192 SYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSDFYAFP--RMDPRG-ERMAWIEWHHPNM 268 (548)
Q Consensus 192 ~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~~~~~p--~~SPDG-k~La~~~~~~~~~ 268 (548)
.+..+.|+|++ .|+....+ ..|.++|+.++.. ....+......+... .|+||| +.||=.+.
T Consensus 268 ~v~sv~~s~~~-~lasgs~D---------gtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~----- 331 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKN---------GFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV----- 331 (524)
T ss_dssp CEEEEEESSSS-EEEEEETT---------SEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEET-----
T ss_pred CEEEEEecCCC-eEEEEeCC---------CEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEecc-----
Confidence 35567899875 55443322 3688889987641 022343333445544 579998 66653332
Q ss_pred CCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCee-Eeeccccccc
Q 008927 269 PWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEV-LAIYSLDAEF 347 (548)
Q Consensus 269 p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~-~~l~~~~~d~ 347 (548)
...|.+.|+.. ++. ...+.+.... ..+....|+|||+.++.+.. ++ .+.++|+.++.. ..+...
T Consensus 332 ---D~tvklWD~~~-~~~--~~~~~~~~~~--~~v~~v~fsp~~~~l~s~~~-d~--tv~lwd~~~~~~~~~l~gH---- 396 (524)
T 2j04_B 332 ---DGYFYIFNPKD-IAT--TKTTVSRFRG--SNLVPVVYCPQIYSYIYSDG-AS--SLRAVPSRAAFAVHPLVSR---- 396 (524)
T ss_dssp ---TSEEEEECGGG-HHH--HCEEEEECSC--CSCCCEEEETTTTEEEEECS-SS--EEEEEETTCTTCCEEEEEC----
T ss_pred ---CCeEEEEECCC-CCc--cccccccccc--CcccceEeCCCcCeEEEeCC-CC--cEEEEECcccccceeeecC----
Confidence 24678888863 331 1122221101 23567899999995444443 33 466677766553 333311
Q ss_pred CCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCC
Q 008927 348 SRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFG 390 (548)
Q Consensus 348 ~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~ 390 (548)
..+. ...+|+| ++..| ++...++.-.| .|+..
T Consensus 397 ~~~V-----~sva~Sp---~g~~l-~Sgs~Dgtv~l--wd~~~ 428 (524)
T 2j04_B 397 ETTI-----TAIGVSR---LHPMV-LAGSADGSLII--TNAAR 428 (524)
T ss_dssp SSCE-----EEEECCS---SCCBC-EEEETTTEEEC--CBSCS
T ss_pred CCce-----EEEEeCC---CCCeE-EEEECCCEEEE--EechH
Confidence 1111 2245554 55544 45666665544 45443
No 392
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=95.22 E-value=0.012 Score=58.76 Aligned_cols=51 Identities=22% Similarity=0.226 Sum_probs=40.4
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCC--------CCCCCCChhh
Q 008927 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY--------GGSTGLSSVP 542 (548)
Q Consensus 473 ~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~Ny--------RGStGyG~~f 542 (548)
..++..||+|++. .++.|+||-+||| ++...+||+|+..|+ |||.|||.-|
T Consensus 90 ~~~~~~i~lP~~~------~~p~Pvii~i~~~-------------~~~~~~G~a~~~~~~~~v~~~~~~gs~g~g~f~ 148 (375)
T 3pic_A 90 ISFTVTITYPSSG------TAPYPAIIGYGGG-------------SLPAPAGVAMINFNNDNIAAQVNTGSRGQGKFY 148 (375)
T ss_dssp EEEEEEEECCSSS------CSSEEEEEEETTC-------------SSCCCTTCEEEEECHHHHSCCSSGGGTTCSHHH
T ss_pred eEEEEEEECCCCC------CCCccEEEEECCC-------------ccccCCCeEEEEecccccccccCCCCccceecc
Confidence 3589999999641 3578999999995 122568999999998 9999999833
No 393
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.15 E-value=0.53 Score=49.15 Aligned_cols=120 Identities=10% Similarity=0.035 Sum_probs=69.0
Q ss_pred ceeeCC-CCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCC----ceeeeEE-------CCCCCEEEEEE
Q 008927 195 DGIFDP-RFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSD----FYAFPRM-------DPRGERMAWIE 262 (548)
Q Consensus 195 ~~~~Sp-DG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~----~~~~p~~-------SPDGk~La~~~ 262 (548)
.+.++| ++..| |++++. ...|++||++++. ...|..... .-...+| ++||++|++..
T Consensus 143 ~la~dp~~~~~L-yv~~~~-------~~~i~~ID~~~~~---v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad 211 (496)
T 3kya_A 143 RLAFDPLNKDHL-YICYDG-------HKAIQLIDLKNRM---LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAI 211 (496)
T ss_dssp EEEEETTEEEEE-EEEEET-------EEEEEEEETTTTE---EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEE
T ss_pred EEEEccCCCCEE-EEEECC-------CCeEEEEECCCCE---EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEe
Confidence 467888 45555 444442 2579999999988 666653321 1345678 99999876544
Q ss_pred ecCCCCCCCCceEEEEEecCCCceee---eEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc
Q 008927 263 WHHPNMPWDKAELWVGYISENGDVYK---RVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 263 ~~~~~~p~~~~~L~v~~~~~~g~~~~---~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
+.. ...-....+++++.+.+|.+.. ...+... .....+..+|++..+|+++...+ .||+++++
T Consensus 212 ~~~-~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-----~~p~giavdp~~g~LYvtd~~~g--~V~r~d~~ 277 (496)
T 3kya_A 212 DYD-GKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-----KQCNGATIHPINGELYFNSYEKG--QVFRLDLV 277 (496)
T ss_dssp CCC-TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-----SCCCCEEECTTTCCEEEEETTTT--EEEEECHH
T ss_pred CCC-CCcccCceEEEEecCCCCceeecccceeeccC-----CCceEEEEcCCCCeEEEEECCCC--EEEEEecc
Confidence 321 0000123577777665455421 1233321 23456678897663344444243 69999987
No 394
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=95.14 E-value=0.012 Score=56.73 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=35.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.....+.+.|-...|-- +| ..+.||++||-+.+. ..|.+.++.|+++||.|+.+|+||-
T Consensus 29 ~~~~~~~~~~~p~~~p~~~-~G-~~~~VlllHG~~~s~--~~~~~la~~La~~Gy~Via~Dl~Gh 89 (281)
T 4fbl_A 29 SGMSTTPLQVLPGAEPLYS-VG-SRIGVLVSHGFTGSP--QSMRFLAEGFARAGYTVATPRLTGH 89 (281)
T ss_dssp --------CCCTTCCCEEE-CC-SSEEEEEECCTTCCG--GGGHHHHHHHHHTTCEEEECCCTTS
T ss_pred CCccccceeecCCCccccc-CC-CCceEEEECCCCCCH--HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 5666666666663211111 23 236689999954433 2466788999999999999999973
No 395
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=95.11 E-value=0.017 Score=54.61 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=33.2
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStG 537 (548)
|+||++||.+.... .|....+.|+.+||.|+.+|+||...
T Consensus 41 ~~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~G~G~ 80 (270)
T 3rm3_A 41 VGVLLVHGFTGTPH--SMRPLAEAYAKAGYTVCLPRLKGHGT 80 (270)
T ss_dssp EEEEEECCTTCCGG--GTHHHHHHHHHTTCEEEECCCTTCSS
T ss_pred eEEEEECCCCCChh--HHHHHHHHHHHCCCEEEEeCCCCCCC
Confidence 99999999875543 36677889999999999999998543
No 396
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=95.09 E-value=0.051 Score=52.39 Aligned_cols=53 Identities=11% Similarity=0.104 Sum_probs=39.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHH-HHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSI-QYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~-Q~~asrGyaVl~~NyRGS 535 (548)
||.+++...+-|. .-|.||++||.+.... .|.... ..|+++||.|+.+|+||-
T Consensus 9 ~g~~l~y~~~G~~----------~~~~vvllHG~~~~~~--~w~~~~~~~L~~~G~~vi~~D~rG~ 62 (298)
T 1q0r_A 9 GDVELWSDDFGDP----------ADPALLLVMGGNLSAL--GWPDEFARRLADGGLHVIRYDHRDT 62 (298)
T ss_dssp TTEEEEEEEESCT----------TSCEEEEECCTTCCGG--GSCHHHHHHHHTTTCEEEEECCTTS
T ss_pred CCeEEEEEeccCC----------CCCeEEEEcCCCCCcc--chHHHHHHHHHhCCCEEEeeCCCCC
Confidence 8888887665431 1267999999986553 455544 789999999999999984
No 397
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.09 E-value=0.29 Score=48.78 Aligned_cols=29 Identities=21% Similarity=0.184 Sum_probs=20.7
Q ss_pred CCcCceECcCCcEEEEEeCCCCeeeEEEEec
Q 008927 302 SPTEPKWSSKGELFFVTDRKNGFWNLHKWIE 332 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~ 332 (548)
....+.+.|||.||+++|. ....||++..
T Consensus 324 rp~~v~~~pdG~lyv~td~--~~g~I~ri~~ 352 (353)
T 2g8s_A 324 RIRDVRTGPDGYLYVLTDE--SSGELLKVSP 352 (353)
T ss_dssp CEEEEEECTTSCEEEEECS--TTEEEEEEEC
T ss_pred ceeEEEECCCCcEEEEEeC--CCCEEEEEeC
Confidence 4556788999998888774 2246887753
No 398
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=95.08 E-value=0.026 Score=53.03 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=31.7
Q ss_pred CcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
.|.||++||.+.... .|....+.+.++||.|+.+|+||..
T Consensus 24 ~~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G 63 (279)
T 4g9e_A 24 GAPLLMIHGNSSSGA--IFAPQLEGEIGKKWRVIAPDLPGHG 63 (279)
T ss_dssp EEEEEEECCTTCCGG--GGHHHHHSHHHHHEEEEEECCTTST
T ss_pred CCeEEEECCCCCchh--HHHHHHhHHHhcCCeEEeecCCCCC
Confidence 378999999986543 3556667778899999999999854
No 399
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.09 Score=55.71 Aligned_cols=143 Identities=10% Similarity=-0.057 Sum_probs=80.5
Q ss_pred EEEEeCCCCeEEEEeCCCCCCCce-ecCCCCCCCCceecce--eeCCCC-CEEEEEEeccCCCCCCceeEEEEEECCCCC
Q 008927 157 VIFSNYKDQRLYKHSIDSKDSSPL-PITPDYGEPLVSYADG--IFDPRF-NRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (548)
Q Consensus 157 i~F~~~~~~~Ly~~~~~~~~~~~~-~lT~~~~~~~~~~~~~--~~SpDG-~~i~~v~~~~~~~~~~~~~~l~~idl~~g~ 232 (548)
.+.+...++.|.+.|+..+ ..+. .+.... ..+.+. .|+|+| +.|+..+.| ..|.++|+.+++
T Consensus 279 ~lasgs~DgtV~lWD~~~~-~~~~~~~~~H~----~~V~sv~~~~s~~g~~~laS~S~D---------~tvklWD~~~~~ 344 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDP-EVPSFYDQVHD----SYILSVSTAYSDFEDTVVSTVAVD---------GYFYIFNPKDIA 344 (524)
T ss_dssp EEEEEETTSEEEEEETTBC-SSCSEEEECSS----SCEEEEEEECCTTSCCEEEEEETT---------SEEEEECGGGHH
T ss_pred eEEEEeCCCEEEEEECCCC-CCceEEeeccc----ccEEEEEEEcCCCCCeEEEEeccC---------CeEEEEECCCCC
Confidence 3445556788888888751 2332 233221 224444 578998 655544333 367888988765
Q ss_pred ccCcEEeeec-C-CceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECc
Q 008927 233 IQEPKVLVSG-S-DFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSS 310 (548)
Q Consensus 233 ~~~~~~L~~~-~-~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wsp 310 (548)
. ...+... . ......+|||||+.|+-.. ....+.+.|+.. +. ....+.+.. ..+....|+|
T Consensus 345 ~--~~~~~~~~~~~~v~~v~fsp~~~~l~s~~--------~d~tv~lwd~~~-~~--~~~~l~gH~----~~V~sva~Sp 407 (524)
T 2j04_B 345 T--TKTTVSRFRGSNLVPVVYCPQIYSYIYSD--------GASSLRAVPSRA-AF--AVHPLVSRE----TTITAIGVSR 407 (524)
T ss_dssp H--HCEEEEECSCCSCCCEEEETTTTEEEEEC--------SSSEEEEEETTC-TT--CCEEEEECS----SCEEEEECCS
T ss_pred c--ccccccccccCcccceEeCCCcCeEEEeC--------CCCcEEEEECcc-cc--cceeeecCC----CceEEEEeCC
Confidence 1 2233221 1 1234568999999876322 123588888874 43 123344433 4678899999
Q ss_pred CCcEEEEEeCCCCeeeEEEEecc
Q 008927 311 KGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 311 DG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
||++++.... +|. +.++++.
T Consensus 408 ~g~~l~Sgs~-Dgt--v~lwd~~ 427 (524)
T 2j04_B 408 LHPMVLAGSA-DGS--LIITNAA 427 (524)
T ss_dssp SCCBCEEEET-TTE--EECCBSC
T ss_pred CCCeEEEEEC-CCE--EEEEech
Confidence 9995444433 443 4445553
No 400
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.92 E-value=1.3 Score=42.66 Aligned_cols=239 Identities=11% Similarity=-0.073 Sum_probs=117.8
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEecc-CCCCCCceeEEEEEECCCCCccCcEEeeecC
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR-RQDALNSTTEIVAIALNGQNIQEPKVLVSGS 243 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~-~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~ 243 (548)
..++++++.. .+-+.+...+ ..|...-...-++ .|+.+-... ........++++++|+.+.+ -+.+...+
T Consensus 39 ~~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~p 109 (308)
T 1zgk_A 39 SYLEAYNPSN--GTWLRLADLQ---VPRSGLAGCVVGG-LLYAVGGRNNSPDGNTDSSALDCYNPMTNQ---WSPCAPMS 109 (308)
T ss_dssp CCEEEEETTT--TEEEECCCCS---SCCBSCEEEEETT-EEEEECCEEEETTEEEECCCEEEEETTTTE---EEECCCCS
T ss_pred ceEEEEcCCC--CeEeECCCCC---cccccceEEEECC-EEEEECCCcCCCCCCeecceEEEECCCCCe---EeECCCCC
Confidence 4688888876 5566665442 1222211122244 443331110 00001134679999999887 45554322
Q ss_pred C---ceeeeEECCCCCEEEEEE-ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEe
Q 008927 244 D---FYAFPRMDPRGERMAWIE-WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTD 319 (548)
Q Consensus 244 ~---~~~~p~~SPDGk~La~~~-~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd 319 (548)
. ......+ +|+ |..+. .+... ....++++|... .++ ..+...+ . .........-+++||++.-
T Consensus 110 ~~r~~~~~~~~--~~~-iyv~GG~~~~~---~~~~~~~yd~~~-~~W---~~~~~~p-~--~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 110 VPRNRIGVGVI--DGH-IYAVGGSHGCI---HHNSVERYEPER-DEW---HLVAPML-T--RRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp SCCBTCEEEEE--TTE-EEEECCEETTE---ECCCEEEEETTT-TEE---EECCCCS-S--CCBSCEEEEETTEEEEECC
T ss_pred cCccccEEEEE--CCE-EEEEcCCCCCc---ccccEEEECCCC-CeE---eECCCCC-c--cccceEEEEECCEEEEEeC
Confidence 1 1222222 554 43332 11110 135688999874 443 2232221 0 1111112223667777742
Q ss_pred C--CCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC---eEEEEEEECCCCceE
Q 008927 320 R--KNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---RSYLGILDDFGHSLS 394 (548)
Q Consensus 320 ~--~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g---~~~L~~~dl~~g~~~ 394 (548)
. ......++.+|+.+++.+.+.+.. .+... ..... -++.||+..-.++ ...++++|+++++++
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p----~~r~~---~~~~~-----~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMN----TIRSG---AGVCV-----LHNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCS----SCCBS---CEEEE-----ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCC----Ccccc---ceEEE-----ECCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 2 112456999999888887764321 11111 11122 2455655422111 357899999999998
Q ss_pred eecC-CCcee-EeeeecCCEEEEEEecC--CCCCeEEEEEcCCCcee
Q 008927 395 LLDI-PFTDI-DNITLGNDCLFVEGASG--VEPSSVAKVTLDDHKLK 437 (548)
Q Consensus 395 ~l~~-~~~~~-~~~s~d~~~l~~~~ss~--~~p~~l~~~d~~~~~~~ 437 (548)
.+.. +.... ..+..-++.|++++... ....+++++|+++.+.+
T Consensus 245 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 245 FVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred ECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 8763 22111 11223356677766432 23468999999887754
No 401
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=94.82 E-value=0.031 Score=56.52 Aligned_cols=58 Identities=17% Similarity=0.167 Sum_probs=43.2
Q ss_pred EEeeccCCCeE--EEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCC--------C
Q 008927 464 IEFPTEVPGQK--AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNY--------G 533 (548)
Q Consensus 464 i~~~s~~dG~~--i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~Ny--------R 533 (548)
|+++. .|.. +.+.||+|++ .++.|+||.+||+ . + ...+||+|+..|+ |
T Consensus 114 I~v~~--~g~s~sf~~~i~lP~g-------~~P~Pvii~~~~~-~------~------~~~~G~A~i~f~~~~va~d~~~ 171 (433)
T 4g4g_A 114 VRVTV--GSKSISFSASIRKPSG-------AGPFPAIIGIGGA-S------I------PIPSNVATITFNNDEFGAQMGS 171 (433)
T ss_dssp EEEEE--TTEEEEEEEEEECCSS-------SCCEEEEEEESCC-C------S------CCCTTSEEEEECHHHHSCCSSG
T ss_pred EEEEc--CCeeEEEEEEEECCCC-------CCCccEEEEECCC-c------c------ccCCCeEEEEeCCcccccccCC
Confidence 44443 4543 6999999964 3578999999985 1 1 1568999999998 8
Q ss_pred CCCCCChhhhh
Q 008927 534 GSTGLSSVPST 544 (548)
Q Consensus 534 GStGyG~~f~~ 544 (548)
||.|||+ |.+
T Consensus 172 gsrG~g~-f~~ 181 (433)
T 4g4g_A 172 GSRGQGK-FYD 181 (433)
T ss_dssp GGTTCSH-HHH
T ss_pred CcCCccc-ccc
Confidence 8999998 543
No 402
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=94.75 E-value=0.048 Score=52.20 Aligned_cols=54 Identities=24% Similarity=0.271 Sum_probs=35.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++...+-+ +.+.|.||++||+|.+... |......++.+||.|+.+|+||.
T Consensus 13 ~g~~l~~~~~g~---------~~~~~~vvllHG~~~~~~~--~~~~~~~l~~~g~~vi~~D~~G~ 66 (293)
T 1mtz_A 13 NGIYIYYKLCKA---------PEEKAKLMTMHGGPGMSHD--YLLSLRDMTKEGITVLFYDQFGC 66 (293)
T ss_dssp TTEEEEEEEECC---------SSCSEEEEEECCTTTCCSG--GGGGGGGGGGGTEEEEEECCTTS
T ss_pred CCEEEEEEEECC---------CCCCCeEEEEeCCCCcchh--HHHHHHHHHhcCcEEEEecCCCC
Confidence 787776655433 1123678999999865432 22223445788999999999984
No 403
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=94.68 E-value=0.048 Score=52.08 Aligned_cols=54 Identities=19% Similarity=0.134 Sum_probs=37.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccC-ccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGG-P~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|..++-...-+ +..|+||++||. |.+.....|...+..|+.+ |.|+.+|+||-
T Consensus 15 ~g~~l~y~~~g~----------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~ 69 (285)
T 1c4x_A 15 GTLASHALVAGD----------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGF 69 (285)
T ss_dssp TTSCEEEEEESC----------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTS
T ss_pred CCEEEEEEecCC----------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCC
Confidence 777777544321 234889999995 6544444566667778765 99999999973
No 404
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=94.64 E-value=0.034 Score=52.81 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=32.5
Q ss_pred CcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
-|.||++||.+.+.. .|...+..|+++||.|+.+|.||-
T Consensus 10 g~~vvllHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~ 48 (264)
T 2wfl_A 10 QKHFVLVHGGCLGAW--IWYKLKPLLESAGHKVTAVDLSAA 48 (264)
T ss_dssp CCEEEEECCTTCCGG--GGTTHHHHHHHTTCEEEEECCTTS
T ss_pred CCeEEEECCCccccc--hHHHHHHHHHhCCCEEEEeecCCC
Confidence 377999999986543 467778899999999999999994
No 405
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=94.61 E-value=0.019 Score=61.56 Aligned_cols=59 Identities=22% Similarity=0.299 Sum_probs=36.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc-CccChHHHHHHhc-CcEEEEeCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR-GILNLSIQYWTSR-GWAFVDVNYGG 534 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~-~~~~~~~Q~~asr-GyaVl~~NyRG 534 (548)
|.. +..+|.|.+.... ..++++|+||+||||....-. ..++. ..|+++ |++|+.+|||-
T Consensus 110 dcL--~l~v~~P~~~~~~-~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl 170 (574)
T 3bix_A 110 DCL--YLNIYVPTEDDIR-DSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRL 170 (574)
T ss_dssp CCC--EEEEEEEC---------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCC
T ss_pred cCC--EEEEEECCCCCcC-CCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcC
Confidence 654 4567778642110 013568999999999764422 22333 567776 69999999993
No 406
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=94.55 E-value=0.023 Score=52.26 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=33.3
Q ss_pred CCCCcEEEEEccCccccccCccChHHHHHHh--cCcEEEEeCCCC
Q 008927 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGG 534 (548)
Q Consensus 492 ~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~as--rGyaVl~~NyRG 534 (548)
+++.|+||++||++.... .|....+.|++ +||.|+.+|++|
T Consensus 21 ~~~~~~vv~lHG~~~~~~--~~~~~~~~l~~~~~g~~v~~~d~p~ 63 (226)
T 3cn9_A 21 PNADACIIWLHGLGADRT--DFKPVAEALQMVLPSTRFILPQAPS 63 (226)
T ss_dssp TTCCEEEEEECCTTCCGG--GGHHHHHHHHHHCTTEEEEECCCCE
T ss_pred CCCCCEEEEEecCCCChH--HHHHHHHHHhhcCCCcEEEeecCCC
Confidence 457799999999985443 46667788888 999999999885
No 407
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.54 E-value=3.4 Score=39.47 Aligned_cols=241 Identities=7% Similarity=-0.087 Sum_probs=121.8
Q ss_pred CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecC
Q 008927 164 DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGS 243 (548)
Q Consensus 164 ~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~ 243 (548)
...+|++|+.. .+-+.+.+.. ..|...-...-+++ |+.+ .... ....++++++|+.+++ -+.+...+
T Consensus 23 ~~~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~~-lyv~-GG~~---~~~~~~~~~~d~~~~~---W~~~~~~p 89 (306)
T 3ii7_A 23 PQSCRYFNPKD--YSWTDIRCPF---EKRRDAACVFWDNV-VYIL-GGSQ---LFPIKRMDCYNVVKDS---WYSKLGPP 89 (306)
T ss_dssp TTSEEEEETTT--TEEEECCCCS---CCCBSCEEEEETTE-EEEE-CCBS---SSBCCEEEEEETTTTE---EEEEECCS
T ss_pred CceEEEecCCC--CCEecCCCCC---cccceeEEEEECCE-EEEE-eCCC---CCCcceEEEEeCCCCe---EEECCCCC
Confidence 35789999876 5556665542 12222212222444 4333 2211 1245789999999987 55554322
Q ss_pred Cc-eeeeEECCCCCEEEEEE-ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEE--e
Q 008927 244 DF-YAFPRMDPRGERMAWIE-WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVT--D 319 (548)
Q Consensus 244 ~~-~~~p~~SPDGk~La~~~-~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~s--d 319 (548)
.. .......-+++ |..+. .+... -....++++|... .++ ..+...+ . .......-.-+++||++. +
T Consensus 90 ~~r~~~~~~~~~~~-iyv~GG~~~~~--~~~~~~~~~d~~~-~~W---~~~~~~p-~--~r~~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 90 TPRDSLAACAAEGK-IYTSGGSEVGN--SALYLFECYDTRT-ESW---HTKPSML-T--QRCSHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp SCCBSCEEEEETTE-EEEECCBBTTB--SCCCCEEEEETTT-TEE---EEECCCS-S--CCBSCEEEEETTEEEEECCEE
T ss_pred ccccceeEEEECCE-EEEECCCCCCC--cEeeeEEEEeCCC-Cce---EeCCCCc-C--CcceeEEEEECCEEEEECCCC
Confidence 11 11111222454 43332 22111 0235799999874 443 3333222 1 111111223467777773 2
Q ss_pred CCCC----eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEE-eC--CeEEEEEEECCCCc
Q 008927 320 RKNG----FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYR-QN--GRSYLGILDDFGHS 392 (548)
Q Consensus 320 ~~~g----~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~-~~--g~~~L~~~dl~~g~ 392 (548)
.... ...++++|+++++.+.+.+.. .+... ..... -++.||+.-- .. ....++++|+++++
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~p----~~r~~---~~~~~-----~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATETWTELCPMI----EARKN---HGLVF-----VKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTEEEEECCCS----SCCBS---CEEEE-----ETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCCcccccceEEEeCCCCCeEEECCCcc----chhhc---ceEEE-----ECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 2122 457999999999888775321 11110 11122 2445554421 11 13468999999999
Q ss_pred eEeecC-CCcee-EeeeecCCEEEEEEecC--CCCCeEEEEEcCCCceeee
Q 008927 393 LSLLDI-PFTDI-DNITLGNDCLFVEGASG--VEPSSVAKVTLDDHKLKAV 439 (548)
Q Consensus 393 ~~~l~~-~~~~~-~~~s~d~~~l~~~~ss~--~~p~~l~~~d~~~~~~~~~ 439 (548)
++.+.. +.... .....-++.|++++... ....+++++|+++.+.+.+
T Consensus 228 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 228 WKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp EEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred EEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 988753 22111 11123356677766432 2456899999988876543
No 408
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=94.48 E-value=0.044 Score=52.65 Aligned_cols=59 Identities=25% Similarity=0.375 Sum_probs=41.5
Q ss_pred EEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 463 LIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 463 ~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
...+... +|.+++...+-|. .-|.||++||.+..... .|...++.| ++||.|+.+|.||
T Consensus 4 ~~~~~~~-~g~~l~~~~~G~~----------~~~~vvllHG~~~~~~~-~w~~~~~~L-~~~~~vi~~Dl~G 62 (286)
T 2yys_A 4 EIGYVPV-GEAELYVEDVGPV----------EGPALFVLHGGPGGNAY-VLREGLQDY-LEGFRVVYFDQRG 62 (286)
T ss_dssp EEEEEEC-SSCEEEEEEESCT----------TSCEEEEECCTTTCCSH-HHHHHHGGG-CTTSEEEEECCTT
T ss_pred ceeEEeE-CCEEEEEEeecCC----------CCCEEEEECCCCCcchh-HHHHHHHHh-cCCCEEEEECCCC
Confidence 3445555 8888887776541 12679999999865531 345555667 5699999999999
No 409
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=94.43 E-value=0.03 Score=55.47 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=32.2
Q ss_pred CcEEEEEccCcccccc---CccC-----------hHHHHHHhcCcEEEEeCCCC
Q 008927 495 PPLLVKSHGGPTSEAR---GILN-----------LSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~---~~~~-----------~~~Q~~asrGyaVl~~NyRG 534 (548)
.|.||++||++.+... ..|. ...+.|+.+||.|+.+|+||
T Consensus 50 ~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 103 (354)
T 2rau_A 50 NDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRT 103 (354)
T ss_dssp EEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGG
T ss_pred CCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCC
Confidence 3889999999876542 1343 66789999999999999998
No 410
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=94.40 E-value=0.065 Score=50.91 Aligned_cols=52 Identities=17% Similarity=0.137 Sum_probs=38.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++...+-+. ..|.||++||++.... .|......|+ +||.|+.+|+||-
T Consensus 18 ~g~~l~~~~~g~~----------~~~~vl~lHG~~~~~~--~~~~~~~~l~-~~~~v~~~d~~G~ 69 (299)
T 3g9x_A 18 LGERMHYVDVGPR----------DGTPVLFLHGNPTSSY--LWRNIIPHVA-PSHRCIAPDLIGM 69 (299)
T ss_dssp TTEEEEEEEESCS----------SSCCEEEECCTTCCGG--GGTTTHHHHT-TTSCEEEECCTTS
T ss_pred CCeEEEEEecCCC----------CCCEEEEECCCCccHH--HHHHHHHHHc-cCCEEEeeCCCCC
Confidence 7888887666441 1367999999987654 4556667774 6999999999984
No 411
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=94.34 E-value=0.1 Score=50.92 Aligned_cols=51 Identities=22% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-...- + -|.||++||.|.... .|...+..|+++||.|+.+|.||-
T Consensus 19 ~g~~l~y~~~G-----------~-g~~vvllHG~~~~~~--~w~~~~~~L~~~g~~via~Dl~G~ 69 (328)
T 2cjp_A 19 NGLNMHLAELG-----------E-GPTILFIHGFPELWY--SWRHQMVYLAERGYRAVAPDLRGY 69 (328)
T ss_dssp TTEEEEEEEEC-----------S-SSEEEEECCTTCCGG--GGHHHHHHHHTTTCEEEEECCTTS
T ss_pred CCcEEEEEEcC-----------C-CCEEEEECCCCCchH--HHHHHHHHHHHCCcEEEEECCCCC
Confidence 78887755431 1 278999999987543 456667889999999999999983
No 412
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=94.33 E-value=0.036 Score=50.33 Aligned_cols=41 Identities=10% Similarity=-0.113 Sum_probs=32.4
Q ss_pred CCCCcEEEEEccCccccccCccChHHHHHHh--cCcEEEEeCCCC
Q 008927 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTS--RGWAFVDVNYGG 534 (548)
Q Consensus 492 ~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~as--rGyaVl~~NyRG 534 (548)
+++.|+||++||+.... ..|....+.|++ +||.|+.+|.+|
T Consensus 11 ~~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~g~~v~~~d~p~ 53 (218)
T 1auo_A 11 KPADACVIWLHGLGADR--YDFMPVAEALQESLLTTRFVLPQAPT 53 (218)
T ss_dssp SCCSEEEEEECCTTCCT--TTTHHHHHHHHTTCTTEEEEECCCCE
T ss_pred CCCCcEEEEEecCCCCh--hhHHHHHHHHhhcCCceEEEeCCCCC
Confidence 35679999999987443 346667788998 999999999764
No 413
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=94.28 E-value=0.018 Score=52.86 Aligned_cols=54 Identities=13% Similarity=-0.042 Sum_probs=38.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
++.+++.+++.|.+ ...|+||++||+..... .|....+.|+. ||.|+.+|.+|.
T Consensus 14 ~~~~l~~~~~~~~~--------~~~p~vv~lHG~g~~~~--~~~~~~~~l~~-~~~vv~~d~~~~ 67 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK--------ESRECLFLLHGSGVDET--TLVPLARRIAP-TATLVAARGRIP 67 (223)
T ss_dssp CSSSSCEEEESTTS--------SCCCEEEEECCTTBCTT--TTHHHHHHHCT-TSEEEEECCSEE
T ss_pred cCCCceEEEeCCCC--------CCCCEEEEEecCCCCHH--HHHHHHHhcCC-CceEEEeCCCCC
Confidence 45667777777742 12399999999875433 45556667765 999999998774
No 414
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=94.25 E-value=0.09 Score=50.11 Aligned_cols=51 Identities=22% Similarity=0.195 Sum_probs=38.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-...-+ -|.||++||.+.... .|......|.++||.|+.+|+||-
T Consensus 17 ~g~~l~~~~~g~------------~~~vv~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~ 67 (309)
T 3u1t_A 17 EGATIAYVDEGS------------GQPVLFLHGNPTSSY--LWRNIIPYVVAAGYRAVAPDLIGM 67 (309)
T ss_dssp TTEEEEEEEEEC------------SSEEEEECCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTS
T ss_pred CCeEEEEEEcCC------------CCEEEEECCCcchhh--hHHHHHHHHHhCCCEEEEEccCCC
Confidence 788876544321 378999999986544 466777888999999999999973
No 415
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.17 E-value=7.7 Score=42.04 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=32.6
Q ss_pred EEEEEEECCCCceE-eecCCCcee-EeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 381 SYLGILDDFGHSLS-LLDIPFTDI-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 381 ~~L~~~dl~~g~~~-~l~~~~~~~-~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
..|+.+|+.+|++. +...+.... ..+...++.++ +++ ....|+.+|.++++.
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf-~g~---~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVF-QGT---AAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE-EEC---TTSEEEEEETTTCCE
T ss_pred ceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEE-EEC---CcccchhhhhhcChh
Confidence 67999999999764 333222222 23345666554 442 357899999988874
No 416
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=94.15 E-value=0.037 Score=52.69 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=30.8
Q ss_pred EEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 497 liv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.||++||.+.... .|...++.|+.+||.|+.+|+||-
T Consensus 25 pvvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~G~ 61 (277)
T 1brt_A 25 PVVLIHGFPLSGH--SWERQSAALLDAGYRVITYDRRGF 61 (277)
T ss_dssp EEEEECCTTCCGG--GGHHHHHHHHHTTCEEEEECCTTS
T ss_pred eEEEECCCCCcHH--HHHHHHHHHhhCCCEEEEeCCCCC
Confidence 3889999986543 466778899999999999999984
No 417
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=94.13 E-value=0.038 Score=52.80 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=31.3
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
|.||++||.|.... .|...+..|+++||.|+.+|+||-
T Consensus 28 ~~vvllHG~~~~~~--~w~~~~~~l~~~g~~vi~~D~~G~ 65 (281)
T 3fob_A 28 KPVVLIHGWPLSGR--SWEYQVPALVEAGYRVITYDRRGF 65 (281)
T ss_dssp EEEEEECCTTCCGG--GGTTTHHHHHHTTEEEEEECCTTS
T ss_pred CeEEEECCCCCcHH--HHHHHHHHHHhCCCEEEEeCCCCC
Confidence 45788999987654 466677889999999999999984
No 418
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.01 E-value=4.3 Score=38.62 Aligned_cols=235 Identities=12% Similarity=0.008 Sum_probs=116.7
Q ss_pred eEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCC-
Q 008927 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSD- 244 (548)
Q Consensus 166 ~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~- 244 (548)
.++.+++.. .+-+.+...+ ..+...-...-++ .|+.+ .... .....++++++|+.+.+ -+.+...+.
T Consensus 31 ~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~-~lyv~-GG~~--~~~~~~~~~~~d~~~~~---W~~~~~~p~~ 98 (302)
T 2xn4_A 31 SVECYDFKE--ERWHQVAELP---SRRCRAGMVYMAG-LVFAV-GGFN--GSLRVRTVDSYDPVKDQ---WTSVANMRDR 98 (302)
T ss_dssp CEEEEETTT--TEEEEECCCS---SCCBSCEEEEETT-EEEEE-SCBC--SSSBCCCEEEEETTTTE---EEEECCCSSC
T ss_pred cEEEEcCcC--CcEeEcccCC---cccccceEEEECC-EEEEE-eCcC--CCccccceEEECCCCCc---eeeCCCCCcc
Confidence 578888775 4455554432 1222211122243 44443 2211 11234689999999887 555543221
Q ss_pred --ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEE--eC
Q 008927 245 --FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVT--DR 320 (548)
Q Consensus 245 --~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~s--d~ 320 (548)
......+ +++-+++-..+... ....++++|+.. .++ ..+...+.. .... ..-.-+++||++. +.
T Consensus 99 r~~~~~~~~--~~~iyv~GG~~~~~---~~~~~~~~d~~~-~~W---~~~~~~p~~--r~~~-~~~~~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 99 RSTLGAAVL--NGLLYAVGGFDGST---GLSSVEAYNIKS-NEW---FHVAPMNTR--RSSV-GVGVVGGLLYAVGGYDV 166 (302)
T ss_dssp CBSCEEEEE--TTEEEEEEEECSSC---EEEEEEEEETTT-TEE---EEECCCSSC--CBSC-EEEEETTEEEEECCEET
T ss_pred ccceEEEEE--CCEEEEEcCCCCCc---cCceEEEEeCCC-CeE---eecCCCCCc--ccCc-eEEEECCEEEEEeCCCC
Confidence 1222222 45433322222111 135789999874 443 333322201 1111 1222467777773 22
Q ss_pred CCC--eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC---eEEEEEEECCCCceEe
Q 008927 321 KNG--FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---RSYLGILDDFGHSLSL 395 (548)
Q Consensus 321 ~~g--~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g---~~~L~~~dl~~g~~~~ 395 (548)
... ...++.+|+++++.+.+.+.. .+... ..... -++.||+..-.++ ...++++|+++++++.
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p----~~r~~---~~~~~-----~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMS----TRRSG---AGVGV-----LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCS----SCCBS---CEEEE-----ETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred CCCccccEEEEEeCCCCcEEECCCCc----ccccc---ccEEE-----ECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 111 356999999998888775321 11110 11122 2455655432211 3479999999999988
Q ss_pred ecC-CCcee-EeeeecCCEEEEEEecCC--CCCeEEEEEcCCCce
Q 008927 396 LDI-PFTDI-DNITLGNDCLFVEGASGV--EPSSVAKVTLDDHKL 436 (548)
Q Consensus 396 l~~-~~~~~-~~~s~d~~~l~~~~ss~~--~p~~l~~~d~~~~~~ 436 (548)
+.. +.... ..+..-++.|++++.... ...+++++|+++.+.
T Consensus 235 ~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 235 VADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 763 22111 112234566777664322 246789999987764
No 419
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=93.99 E-value=0.043 Score=54.35 Aligned_cols=57 Identities=11% Similarity=0.022 Sum_probs=37.4
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccC-----------ccChHH---HHHHhcCcEEEEeCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARG-----------ILNLSI---QYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~-----------~~~~~~---Q~~asrGyaVl~~NyRG 534 (548)
||..++-..+-+.+ .++.|.||++||.+...... .|...+ +.|+++||.|+.+|+||
T Consensus 29 ~g~~l~y~~~g~~~-------~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G 99 (366)
T 2pl5_A 29 SPVVIAYETYGTLS-------SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIG 99 (366)
T ss_dssp SSEEEEEEEEECCC-------TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTT
T ss_pred cCceeeEEeccCcC-------CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCC
Confidence 45556555554421 12348899999998766521 344433 24678999999999999
No 420
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=93.97 E-value=0.034 Score=52.86 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=30.6
Q ss_pred EEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 497 LLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 497 liv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.||++||.+.... .|...++.|+.+||.|+.+|+||-
T Consensus 25 pvvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~G~ 61 (279)
T 1hkh_A 25 PVVLIHGYPLDGH--SWERQTRELLAQGYRVITYDRRGF 61 (279)
T ss_dssp EEEEECCTTCCGG--GGHHHHHHHHHTTEEEEEECCTTS
T ss_pred cEEEEcCCCchhh--HHhhhHHHHHhCCcEEEEeCCCCC
Confidence 3899999886543 466777899999999999999984
No 421
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=93.97 E-value=0.11 Score=50.72 Aligned_cols=52 Identities=17% Similarity=0.179 Sum_probs=39.4
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 473 ~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.+++..-.-|. ..-|.||++||.|.... .|...+..|+.+||-|+.+|.||-
T Consensus 34 ~~l~y~~~G~~---------~~g~~vvllHG~~~~~~--~w~~~~~~L~~~g~rvia~Dl~G~ 85 (310)
T 1b6g_A 34 LRAHYLDEGNS---------DAEDVFLCLHGEPTWSY--LYRKMIPVFAESGARVIAPDFFGF 85 (310)
T ss_dssp CEEEEEEEECT---------TCSCEEEECCCTTCCGG--GGTTTHHHHHHTTCEEEEECCTTS
T ss_pred eEEEEEEeCCC---------CCCCEEEEECCCCCchh--hHHHHHHHHHhCCCeEEEeCCCCC
Confidence 78876665441 10267999999987554 566778899999999999999983
No 422
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=93.93 E-value=0.11 Score=52.85 Aligned_cols=54 Identities=17% Similarity=0.118 Sum_probs=42.6
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhc---------CcEEEEeCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSR---------GWAFVDVNYGG 534 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asr---------GyaVl~~NyRG 534 (548)
||..||.+...|.+ ...|.||++||.|.+.. .|...+..|+.. ||.|+.+|.||
T Consensus 76 ~g~~i~~~~~~~~~--------~~~~plll~HG~~~s~~--~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G 138 (388)
T 4i19_A 76 DGATIHFLHVRSPE--------PDATPMVITHGWPGTPV--EFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG 138 (388)
T ss_dssp TTEEEEEEEECCSS--------TTCEEEEEECCTTCCGG--GGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT
T ss_pred CCeEEEEEEccCCC--------CCCCeEEEECCCCCCHH--HHHHHHHHHhCcccccCCCCCCeEEEEEcCCC
Confidence 89999988877642 23477899999997654 355667788887 99999999998
No 423
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=93.89 E-value=0.04 Score=51.64 Aligned_cols=53 Identities=9% Similarity=-0.044 Sum_probs=38.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-...-+ ..|.||++||.+... ...|...++.|+.+||.|+.+|+||-
T Consensus 10 ~g~~l~~~~~g~-----------~~~~vvllHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~ 62 (254)
T 2ocg_A 10 NGVQLHYQQTGE-----------GDHAVLLLPGMLGSG-ETDFGPQLKNLNKKLFTVVAWDPRGY 62 (254)
T ss_dssp TTEEEEEEEEEC-----------CSEEEEEECCTTCCH-HHHCHHHHHHSCTTTEEEEEECCTTS
T ss_pred CCEEEEEEEecC-----------CCCeEEEECCCCCCC-ccchHHHHHHHhhCCCeEEEECCCCC
Confidence 787777544321 236799999987541 22356677889999999999999984
No 424
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=93.88 E-value=0.13 Score=53.23 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=48.7
Q ss_pred CCeEEEeecc-CCCeE--EEEEEEcCCCCCCCCCCCCCCcEEEEEccCcccc--ccCc------c--------C---hHH
Q 008927 460 LPELIEFPTE-VPGQK--AYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSE--ARGI------L--------N---LSI 517 (548)
Q Consensus 460 ~pe~i~~~s~-~dG~~--i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~--~~~~------~--------~---~~~ 517 (548)
....|.|.+. .+|.. +-|.++.|+++. .+.|+|.+-||--... ..++ . . ..+
T Consensus 74 ~a~ri~Y~std~~G~p~~~~gtv~~P~~~~------~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~ 147 (462)
T 3guu_A 74 ASFQLQYRTTNTQNEAVADVATVWIPAKPA------SPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPII 147 (462)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECSSCC------SSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHH
T ss_pred eEEEEEEEEECCCCCEEEEEEEEEecCCCC------CCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHH
Confidence 3456778776 24544 889999997631 2479999999964321 1111 0 1 235
Q ss_pred HHH-HhcCcEEEEeCCCCCCC
Q 008927 518 QYW-TSRGWAFVDVNYGGSTG 537 (548)
Q Consensus 518 Q~~-asrGyaVl~~NyRGStG 537 (548)
+.| +++||+|+.+||+|-.+
T Consensus 148 ~~~~l~~G~~Vv~~Dy~G~G~ 168 (462)
T 3guu_A 148 IGWALQQGYYVVSSDHEGFKA 168 (462)
T ss_dssp HHHHHHTTCEEEEECTTTTTT
T ss_pred HHHHHhCCCEEEEecCCCCCC
Confidence 677 99999999999998654
No 425
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=93.79 E-value=0.013 Score=54.02 Aligned_cols=49 Identities=12% Similarity=-0.021 Sum_probs=36.7
Q ss_pred CCCCcEEEEEcc-CccccccCccChHHHHHHhcCcEEEEeCCCCCCCCChhhh
Q 008927 492 EEKPPLLVKSHG-GPTSEARGILNLSIQYWTSRGWAFVDVNYGGSTGLSSVPS 543 (548)
Q Consensus 492 ~~~~Pliv~iHG-GP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGStGyG~~f~ 543 (548)
++..|+||++|| |-++. .|....+.|...||+|+.||.+|...|+..+.
T Consensus 19 ~~a~~~Vv~lHG~G~~~~---~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~ 68 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGTAA---DIISLQKVLKLDEMAIYAPQATNNSWYPYSFM 68 (210)
T ss_dssp TTCSEEEEEECCTTCCHH---HHHGGGGTSSCTTEEEEEECCGGGCSSSSCTT
T ss_pred ccCCcEEEEEeCCCCCHH---HHHHHHHHhCCCCeEEEeecCCCCCccccccC
Confidence 445699999999 54433 34455677788999999999999888875543
No 426
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=93.78 E-value=0.15 Score=52.15 Aligned_cols=55 Identities=16% Similarity=0.070 Sum_probs=43.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHh------cCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS------RGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~as------rGyaVl~~NyRGS 535 (548)
||..||.....+.+ ...|.||++||.|.+.. .|...+..|+. .||.|+.+|.+|-
T Consensus 93 ~g~~i~~~~~~~~~--------~~~~pllllHG~~~s~~--~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~ 153 (408)
T 3g02_A 93 EGLTIHFAALFSER--------EDAVPIALLHGWPGSFV--EFYPILQLFREEYTPETLPFHLVVPSLPGY 153 (408)
T ss_dssp TTEEEEEEEECCSC--------TTCEEEEEECCSSCCGG--GGHHHHHHHHHHCCTTTCCEEEEEECCTTS
T ss_pred CCEEEEEEEecCCC--------CCCCeEEEECCCCCcHH--HHHHHHHHHhcccccccCceEEEEECCCCC
Confidence 89999988887642 22367899999997654 36666788888 5999999999984
No 427
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=93.76 E-value=0.042 Score=50.42 Aligned_cols=38 Identities=13% Similarity=0.290 Sum_probs=28.9
Q ss_pred CCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+.|+||++||.+..... |. ....|+ +||.|+.+|+||.
T Consensus 15 ~~~~vv~~hG~~~~~~~--~~-~~~~l~-~g~~v~~~d~~g~ 52 (245)
T 3e0x_A 15 SPNTLLFVHGSGCNLKI--FG-ELEKYL-EDYNCILLDLKGH 52 (245)
T ss_dssp CSCEEEEECCTTCCGGG--GT-TGGGGC-TTSEEEEECCTTS
T ss_pred CCCEEEEEeCCcccHHH--HH-HHHHHH-hCCEEEEecCCCC
Confidence 45899999999876654 33 344454 8999999999984
No 428
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=93.75 E-value=0.042 Score=54.73 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=30.1
Q ss_pred CcEEEEEccCccccccC------c-cChHH---HHHHhcCcEEEEeCCCC
Q 008927 495 PPLLVKSHGGPTSEARG------I-LNLSI---QYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~------~-~~~~~---Q~~asrGyaVl~~NyRG 534 (548)
.|.||++||.+...... + |...+ +.|+++||.|+.+|+||
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G 108 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLG 108 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTT
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCC
Confidence 48999999998776541 1 33333 24778999999999999
No 429
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=93.72 E-value=0.024 Score=52.10 Aligned_cols=40 Identities=8% Similarity=-0.056 Sum_probs=29.6
Q ss_pred CCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCC
Q 008927 492 EEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYG 533 (548)
Q Consensus 492 ~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyR 533 (548)
+++.|+||++||+..... .|....+.|+++||.|+.+|.+
T Consensus 20 ~~~~~~vv~lHG~~~~~~--~~~~~~~~l~~~g~~v~~~~~~ 59 (232)
T 1fj2_A 20 RKATAAVIFLHGLGDTGH--GWAEAFAGIRSSHIKYICPHAP 59 (232)
T ss_dssp SCCSEEEEEECCSSSCHH--HHHHHHHTTCCTTEEEEECCCC
T ss_pred CCCCceEEEEecCCCccc--hHHHHHHHHhcCCcEEEecCCC
Confidence 356799999999976443 3455567778889999999433
No 430
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=93.71 E-value=0.085 Score=52.17 Aligned_cols=63 Identities=13% Similarity=0.055 Sum_probs=40.6
Q ss_pred EEeeccCCCeEE----EEEEEcCCCCCCCCCCCCCCcEEEEEccCcccccc----------Cc-cChHH---HHHHhcCc
Q 008927 464 IEFPTEVPGQKA----YAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEAR----------GI-LNLSI---QYWTSRGW 525 (548)
Q Consensus 464 i~~~s~~dG~~i----~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~----------~~-~~~~~---Q~~asrGy 525 (548)
-.|+.. +|.++ +...+-+.+ ..+.|+||++||.+..... .+ |...+ +.++++||
T Consensus 15 ~~~~~~-~g~~l~~~i~y~~~g~~~-------~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~ 86 (377)
T 3i1i_A 15 KEYTFE-NGRTIPVQMGYETYGTLN-------RERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQY 86 (377)
T ss_dssp EEEECT-TSCEEEEEEEEEEESCCC-------TTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTC
T ss_pred cceeec-CCCEeeeeEEEEeecccC-------CCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccE
Confidence 346666 77766 222232211 2345899999999877543 11 33333 56788999
Q ss_pred EEEEeCCCC
Q 008927 526 AFVDVNYGG 534 (548)
Q Consensus 526 aVl~~NyRG 534 (548)
.|+.+|.||
T Consensus 87 ~vi~~D~~G 95 (377)
T 3i1i_A 87 FVICTDNLC 95 (377)
T ss_dssp EEEEECCTT
T ss_pred EEEEecccc
Confidence 999999994
No 431
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=93.69 E-value=0.049 Score=51.13 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=31.2
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
|+||++||.+.... .|....+.|+. ||.|+.+|+||-.
T Consensus 29 ~~vv~lHG~~~~~~--~~~~~~~~l~~-g~~v~~~d~~G~G 66 (282)
T 3qvm_A 29 KTVLLAHGFGCDQN--MWRFMLPELEK-QFTVIVFDYVGSG 66 (282)
T ss_dssp CEEEEECCTTCCGG--GGTTTHHHHHT-TSEEEECCCTTST
T ss_pred CeEEEECCCCCCcc--hHHHHHHHHhc-CceEEEEecCCCC
Confidence 89999999876543 56667788887 9999999999854
No 432
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=93.67 E-value=0.041 Score=51.33 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=31.5
Q ss_pred CCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 493 ~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+..|+||++||.+.... .|....+.|+. ||.|+.+|+||-
T Consensus 18 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~-g~~v~~~D~~G~ 57 (269)
T 4dnp_A 18 SGERVLVLAHGFGTDQS--AWNRILPFFLR-DYRVVLYDLVCA 57 (269)
T ss_dssp SCSSEEEEECCTTCCGG--GGTTTGGGGTT-TCEEEEECCTTS
T ss_pred CCCCEEEEEeCCCCcHH--HHHHHHHHHhC-CcEEEEEcCCCC
Confidence 34589999999886543 45566677887 999999999983
No 433
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=93.64 E-value=0.15 Score=48.32 Aligned_cols=50 Identities=14% Similarity=0.190 Sum_probs=38.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++....- +-|.||++||.+.... .|....+.|+. ||.|+.+|+||-
T Consensus 21 ~g~~l~~~~~g------------~~~~vv~lHG~~~~~~--~~~~~~~~l~~-~~~v~~~D~~G~ 70 (306)
T 3r40_A 21 SSGRIFARVGG------------DGPPLLLLHGFPQTHV--MWHRVAPKLAE-RFKVIVADLPGY 70 (306)
T ss_dssp TTCCEEEEEEE------------CSSEEEEECCTTCCGG--GGGGTHHHHHT-TSEEEEECCTTS
T ss_pred CCEEEEEEEcC------------CCCeEEEECCCCCCHH--HHHHHHHHhcc-CCeEEEeCCCCC
Confidence 78887765532 1278999999987654 46667788888 999999999985
No 434
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=93.62 E-value=0.14 Score=49.48 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=38.9
Q ss_pred eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 473 QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 473 ~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
.+++....-|. ..-|.||++||.|... ..|...+..|+.+||-|+.+|.||-
T Consensus 33 ~~l~y~~~G~~---------~~g~~vvllHG~~~~~--~~w~~~~~~L~~~g~rvia~Dl~G~ 84 (297)
T 2xt0_A 33 LRMHYVDEGPR---------DAEHTFLCLHGEPSWS--FLYRKMLPVFTAAGGRVVAPDLFGF 84 (297)
T ss_dssp CCEEEEEESCT---------TCSCEEEEECCTTCCG--GGGTTTHHHHHHTTCEEEEECCTTS
T ss_pred eEEEEEEccCC---------CCCCeEEEECCCCCcc--eeHHHHHHHHHhCCcEEEEeCCCCC
Confidence 77876665431 1126789999998654 3566778889999999999999984
No 435
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=93.60 E-value=0.021 Score=54.55 Aligned_cols=71 Identities=18% Similarity=0.121 Sum_probs=35.5
Q ss_pred CCeEEEeeccCCCeE-EEEEEEcCCC-CCCC-CCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 460 LPELIEFPTEVPGQK-AYAYYYPPSN-PIYQ-ASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~-i~g~l~~P~~-~~~~-~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
..|.+.|++. ++.+ ...|+..+.. +.-. +..+...|.||++||.+.... .|....+.|+. ||.|+.+|+||
T Consensus 14 ~~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~~~--~~~~l~~~L~~-~~~v~~~D~~G 87 (280)
T 3qmv_A 14 GTENLYFQSN-ALLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVS--AFRGWQERLGD-EVAVVPVQLPG 87 (280)
T ss_dssp ---------------CHHHHSCCCCCCCCCCCCCTTTCSEEEEEECCTTCCGG--GGTTHHHHHCT-TEEEEECCCTT
T ss_pred Ccceeeeecc-hhhhhcchheecCCCCCcccccccCCCCceEEEECCCCCChH--HHHHHHHhcCC-CceEEEEeCCC
Confidence 4567888886 6643 3445554321 0000 001122388999999886543 46677788877 99999999998
No 436
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.57 E-value=3 Score=41.29 Aligned_cols=84 Identities=10% Similarity=0.028 Sum_probs=46.2
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEc---CCCCCcccCCcCceECcC-
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVA---GFDPTIVESPTEPKWSSK- 311 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~---~~~~~~~~~~~~~~wspD- 311 (548)
.+.+..+-..-...+|.|||+ | |++.. ...|++++ + |+......+. ... .....+.++||
T Consensus 23 ~~~va~~l~~P~~ia~~pdG~-l-~V~e~-------~g~I~~i~-~--g~~~~~~~~~v~~~g~----~~p~gia~~pdf 86 (352)
T 2ism_A 23 VEEVVGGLEVPWALAFLPDGG-M-LIAER-------PGRIRLFR-E--GRLSTYAELSVYHRGE----SGLLGLALHPRF 86 (352)
T ss_dssp EEEEECCCSCEEEEEECTTSC-E-EEEET-------TTEEEEEE-T--TEEEEEEECCCCCSTT----CSEEEEEECTTT
T ss_pred EEEEECCCCCceEEEEcCCCe-E-EEEeC-------CCeEEEEE-C--CCccEeecceEeecCC----CCceeEEECCCC
Confidence 455665544445678999998 4 44422 25788887 3 4321111111 111 23456789998
Q ss_pred --Cc-EEEEEeCCCC--eeeEEEEeccCC
Q 008927 312 --GE-LFFVTDRKNG--FWNLHKWIESNN 335 (548)
Q Consensus 312 --G~-L~~~sd~~~g--~~~Ly~~d~~~g 335 (548)
+. ||+......+ ...|++++.+++
T Consensus 87 ~~~g~lYv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 87 PQEPYVYAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred CCCCEEEEEEecCCCCCccEEEEEEeCCC
Confidence 55 6554322011 257999988655
No 437
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.56 E-value=10 Score=41.29 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=32.9
Q ss_pred EEEEEEECCCCceE-eecCCCcee-EeeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 381 SYLGILDDFGHSLS-LLDIPFTDI-DNITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 381 ~~L~~~dl~~g~~~-~l~~~~~~~-~~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
..|+.+|+.+|++. ++..+.... ..++..++ ++|+++ .-..|+.+|.++|+.
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg-lvf~gt---~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGN-LVFEGS---ADGRVIAYAADTGEK 508 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTT-EEEEEC---TTSEEEEEETTTCCE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCC-EEEEEC---CCCcEEEEECCCCcc
Confidence 67999999999754 333322222 23455566 445553 347899999998873
No 438
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=93.42 E-value=0.11 Score=50.98 Aligned_cols=56 Identities=18% Similarity=0.260 Sum_probs=39.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCC-cEEEEEccCccccccCccChHHHHHHh-cCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKP-PLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~-Pliv~iHGGP~~~~~~~~~~~~Q~~as-rGyaVl~~NyRGS 535 (548)
+|.+++...+-|.+ +.++ +.||++||+|.+.. .|...+..|+. .||.|+.+|.||-
T Consensus 36 ~g~~l~y~~~G~~~-------~~~~g~plvllHG~~~~~~--~w~~~~~~l~~~~~~~Via~D~rG~ 93 (330)
T 3nwo_A 36 GDHETWVQVTTPEN-------AQPHALPLIVLHGGPGMAH--NYVANIAALADETGRTVIHYDQVGC 93 (330)
T ss_dssp TTEEEEEEEECCSS-------CCTTCCCEEEECCTTTCCS--GGGGGGGGHHHHHTCCEEEECCTTS
T ss_pred cCcEEEEEEecCcc-------CCCCCCcEEEECCCCCCch--hHHHHHHHhccccCcEEEEECCCCC
Confidence 78899888887632 1111 24778899987654 34445566776 7999999999984
No 439
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=93.22 E-value=0.15 Score=47.53 Aligned_cols=37 Identities=22% Similarity=0.149 Sum_probs=30.0
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
|.||++||++..... |....+.|+. ||.|+.+|+||.
T Consensus 24 ~~vv~~HG~~~~~~~--~~~~~~~L~~-~~~vi~~d~~G~ 60 (278)
T 3oos_A 24 PPLCVTHLYSEYNDN--GNTFANPFTD-HYSVYLVNLKGC 60 (278)
T ss_dssp SEEEECCSSEECCTT--CCTTTGGGGG-TSEEEEECCTTS
T ss_pred CeEEEEcCCCcchHH--HHHHHHHhhc-CceEEEEcCCCC
Confidence 679999999876543 5666677777 999999999984
No 440
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=93.18 E-value=0.12 Score=49.89 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=38.9
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+...++.. ||.+++-...-+. + -|.||++||+|.+... .....+|..+||.|+.+|.||-
T Consensus 15 ~~~~~~~~-~g~~l~~~~~g~~---------~-g~~vvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~ 74 (317)
T 1wm1_A 15 DSGWLDTG-DGHRIYWELSGNP---------N-GKPAVFIHGGPGGGIS---PHHRQLFDPERYKVLLFDQRGC 74 (317)
T ss_dssp EEEEEECS-SSCEEEEEEEECT---------T-SEEEEEECCTTTCCCC---GGGGGGSCTTTEEEEEECCTTS
T ss_pred eeeEEEcC-CCcEEEEEEcCCC---------C-CCcEEEECCCCCcccc---hhhhhhccccCCeEEEECCCCC
Confidence 44556776 8888875443221 1 2558999999864422 1223455568999999999993
No 441
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=93.15 E-value=0.22 Score=47.04 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=40.8
Q ss_pred eeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 466 FPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 466 ~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
|.+. ||.+++-...-+. ..|+||++||.+.... .|...+..|+. +|.|+.+|.||
T Consensus 9 ~~~~-~g~~l~y~~~G~~----------~~p~lvl~hG~~~~~~--~w~~~~~~L~~-~~~vi~~D~rG 63 (266)
T 3om8_A 9 LATS-DGASLAYRLDGAA----------EKPLLALSNSIGTTLH--MWDAQLPALTR-HFRVLRYDARG 63 (266)
T ss_dssp EECT-TSCEEEEEEESCT----------TSCEEEEECCTTCCGG--GGGGGHHHHHT-TCEEEEECCTT
T ss_pred Eecc-CCcEEEEEecCCC----------CCCEEEEeCCCccCHH--HHHHHHHHhhc-CcEEEEEcCCC
Confidence 4565 8999887665431 2378899999876543 46666777775 79999999998
No 442
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.11 E-value=2.8 Score=43.20 Aligned_cols=103 Identities=10% Similarity=0.049 Sum_probs=51.6
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCC-----CCCceecceeeCCC---CCEEEEEEecc-CCCCC---CceeEE
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYG-----EPLVSYADGIFDPR---FNRYVTVREDR-RQDAL---NSTTEI 223 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~-----~~~~~~~~~~~SpD---G~~i~~v~~~~-~~~~~---~~~~~l 223 (548)
+|+++....++|++++.++ +..+.+..... .......+++|+|| +.+|++..... ....+ ...+.|
T Consensus 39 ~l~V~e~~gg~I~~~~~~~--g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v 116 (454)
T 1cru_A 39 QIWLTERATGKILRVNPES--GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTII 116 (454)
T ss_dssp CEEEEETTTCEEEEECTTT--CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEE
T ss_pred cEEEEEcCCCEEEEEECCC--CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEE
Confidence 5666654445899998754 44443322110 00112346889997 66665443221 00000 124689
Q ss_pred EEEECCCCC--ccCcEEeee-c----CCceeeeEECCCCCEEEEE
Q 008927 224 VAIALNGQN--IQEPKVLVS-G----SDFYAFPRMDPRGERMAWI 261 (548)
Q Consensus 224 ~~idl~~g~--~~~~~~L~~-~----~~~~~~p~~SPDGk~La~~ 261 (548)
++++++.+. ....+.|.. . ..+-....|+|||+ |.+.
T Consensus 117 ~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~ 160 (454)
T 1cru_A 117 RRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYT 160 (454)
T ss_dssp EEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEE
T ss_pred EEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEE
Confidence 988876432 111233332 1 11235678999997 5433
No 443
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=93.09 E-value=0.15 Score=49.00 Aligned_cols=54 Identities=19% Similarity=0.178 Sum_probs=38.1
Q ss_pred CC-eEEEEEEEcCCCCCCCCCCCCCCcEEEEEccC-ccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PG-QKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG-~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGG-P~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+| ..++-...-+ + +.|.||++||. |.+.....|...+..|+++ |.|+.+|.||-
T Consensus 21 ~g~~~l~y~~~G~---------g-~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~ 76 (291)
T 2wue_A 21 DGPLKLHYHEAGV---------G-NDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGY 76 (291)
T ss_dssp SSEEEEEEEEECT---------T-CSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTS
T ss_pred CCcEEEEEEecCC---------C-CCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCC
Confidence 78 8887554321 2 22689999996 6544444566677788766 99999999983
No 444
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=93.04 E-value=0.13 Score=49.48 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=38.9
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+...++.. ||..++-...-+. .-|.||++||+|.+... .....+|..+||.|+.+|.||-
T Consensus 12 ~~~~~~~~-~g~~l~y~~~G~~----------~g~pvvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~ 71 (313)
T 1azw_A 12 QQGSLKVD-DRHTLYFEQCGNP----------HGKPVVMLHGGPGGGCN---DKMRRFHDPAKYRIVLFDQRGS 71 (313)
T ss_dssp EEEEEECS-SSCEEEEEEEECT----------TSEEEEEECSTTTTCCC---GGGGGGSCTTTEEEEEECCTTS
T ss_pred ccceEEcC-CCCEEEEEecCCC----------CCCeEEEECCCCCcccc---HHHHHhcCcCcceEEEECCCCC
Confidence 44556665 8888875544221 12558999999865432 1223455568999999999993
No 445
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=92.94 E-value=0.26 Score=46.72 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=38.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++-...- .-|.||++||++.... .|...++.|+.+ |.|+.+|+||-
T Consensus 18 ~g~~l~~~~~g------------~~~~vv~lHG~~~~~~--~~~~~~~~L~~~-~~vi~~D~~G~ 67 (301)
T 3kda_A 18 DGVKLHYVKGG------------QGPLVMLVHGFGQTWY--EWHQLMPELAKR-FTVIAPDLPGL 67 (301)
T ss_dssp TTEEEEEEEEE------------SSSEEEEECCTTCCGG--GGTTTHHHHTTT-SEEEEECCTTS
T ss_pred CCeEEEEEEcC------------CCCEEEEECCCCcchh--HHHHHHHHHHhc-CeEEEEcCCCC
Confidence 88888755432 2378999999986653 467778889988 99999999984
No 446
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=92.85 E-value=0.054 Score=49.18 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=28.3
Q ss_pred CCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 493 ~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
++.| ||++||..... ..|....+.|+ .||.|+.+|.+++
T Consensus 15 ~~~p-vv~lHG~g~~~--~~~~~~~~~l~-~~~~v~~~~~~~~ 53 (209)
T 3og9_A 15 DLAP-LLLLHSTGGDE--HQLVEIAEMIA-PSHPILSIRGRIN 53 (209)
T ss_dssp TSCC-EEEECCTTCCT--TTTHHHHHHHS-TTCCEEEECCSBC
T ss_pred CCCC-EEEEeCCCCCH--HHHHHHHHhcC-CCceEEEecCCcC
Confidence 4568 99999976433 34556667777 8999999996643
No 447
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.81 E-value=12 Score=39.90 Aligned_cols=53 Identities=8% Similarity=-0.002 Sum_probs=32.5
Q ss_pred eEEEEEEECCCCceE-eecCCCceeE-eeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 380 RSYLGILDDFGHSLS-LLDIPFTDID-NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~-~l~~~~~~~~-~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
...|+.+|+.+|++. +...+..... .+...++.+ |+++ ....|+.+|.++|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglv-f~g~---~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLV-FTGT---GDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEE-EEEC---TTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEE-EEEC---CCCcEEEEECCCCCE
Confidence 467999999999754 3332222222 234455654 4443 246899999988873
No 448
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.78 E-value=4.5 Score=40.02 Aligned_cols=167 Identities=13% Similarity=0.049 Sum_probs=80.5
Q ss_pred eeEEECCEEEEEeCCCCeEEEEeCCCCCCCceecCCC--CCCCCceecceeeCCC---CCEEEEEEec-cCCCCCCceeE
Q 008927 149 AFRIFGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPD--YGEPLVSYADGIFDPR---FNRYVTVRED-RRQDALNSTTE 222 (548)
Q Consensus 149 ~~~~~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~--~~~~~~~~~~~~~SpD---G~~i~~v~~~-~~~~~~~~~~~ 222 (548)
+|.++| +|+++. ..++|++++.++ + +.+... .........++.++|| +..|++.... ..+ ....+.
T Consensus 35 a~~pdG-~l~V~e-~~g~I~~~d~~G---~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~--~~~~~~ 106 (354)
T 3a9g_A 35 APLGGG-RYLVTE-RPGRLVLISPSG---K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG--GHIRNR 106 (354)
T ss_dssp EEEETT-EEEEEE-TTTEEEEECSSC---E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG--GCEEEE
T ss_pred EEcCCC-eEEEEe-CCCEEEEEeCCC---c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC--CCcceE
Confidence 455554 566655 458999998553 3 333210 0001123456789998 6665443221 110 012368
Q ss_pred EEEEECCCC--CccCcEEeee---cCC--ceeeeEECCCCCEEEEEEecCCCCC-------CCCceEEEEEecCCCcee-
Q 008927 223 IVAIALNGQ--NIQEPKVLVS---GSD--FYAFPRMDPRGERMAWIEWHHPNMP-------WDKAELWVGYISENGDVY- 287 (548)
Q Consensus 223 l~~idl~~g--~~~~~~~L~~---~~~--~~~~p~~SPDGk~La~~~~~~~~~p-------~~~~~L~v~~~~~~g~~~- 287 (548)
|++++++++ .....+.|.. ... +-....|+|||+ |+ ++......+ .....|+.++.+ |++.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Ly-vt~G~~~~~~~~~d~~~~~G~I~ri~~d--G~~p~ 182 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LY-ITTGDAADPRLAQDLSSLAGKILRVDEE--GRPPA 182 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EE-EECCCTTCGGGGTCTTCCSSEEEEECTT--SCCCT
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EE-EEECCCCCCccccCCCCCCeEEEEEcCC--CCCCC
Confidence 999998765 1111233322 111 224578999996 54 442211110 012467776654 3210
Q ss_pred -----eeEEEcCCCCCcccCCcCceECc-CCcEEEEEeCCCCeeeEEEEe
Q 008927 288 -----KRVCVAGFDPTIVESPTEPKWSS-KGELFFVTDRKNGFWNLHKWI 331 (548)
Q Consensus 288 -----~~~~l~~~~~~~~~~~~~~~wsp-DG~L~~~sd~~~g~~~Ly~~d 331 (548)
...+++.+- .....+.|+| +|+||+..........|.++.
T Consensus 183 ~npf~~~~i~a~G~----rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~ 228 (354)
T 3a9g_A 183 DNPFPNSPIWSYGH----RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL 228 (354)
T ss_dssp TSSSTTCCEEEECC----SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC
T ss_pred CCCCCCCcEEEEcc----CCcceEEEeCCCCCEEEEecCCCCCcEEEEec
Confidence 012222221 2345688999 566766543212334455553
No 449
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.78 E-value=7.1 Score=37.41 Aligned_cols=244 Identities=4% Similarity=-0.098 Sum_probs=119.0
Q ss_pred CeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEecc--CCCCCCceeEEEEEECCCCCccCcEEeeec
Q 008927 165 QRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDR--RQDALNSTTEIVAIALNGQNIQEPKVLVSG 242 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~--~~~~~~~~~~l~~idl~~g~~~~~~~L~~~ 242 (548)
..++.+|+.. ++-+. .+... +..|...-....+++.+++--... ........++++++|+.+++ -+.+...
T Consensus 13 ~~~~~yd~~~--~~W~~-~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~ 85 (315)
T 4asc_A 13 EGAVAYDPAA--NECYC-ASLSS-QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE---WLGMPPL 85 (315)
T ss_dssp TEEEEEETTT--TEEEE-EECCC-CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE---EEECCCB
T ss_pred CceEEECCCC--CeEec-CCCCC-CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe---EEECCCC
Confidence 5688888875 33322 22110 112322223344666544432211 11111234569999999887 4555433
Q ss_pred CCc---eeeeEECCCCCEEEEEE-ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEE
Q 008927 243 SDF---YAFPRMDPRGERMAWIE-WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVT 318 (548)
Q Consensus 243 ~~~---~~~p~~SPDGk~La~~~-~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~s 318 (548)
+.. .....+ ++ +|..+. .+.....-....++++|... +++ ..+...+ . .......-.-+++||++.
T Consensus 86 p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~-~~W---~~~~~~p-~--~r~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 86 PSPRCLFGLGEA--LN-SIYVVGGREIKDGERCLDSVMCYDRLS-FKW---GESDPLP-Y--VVYGHTVLSHMDLVYVIG 155 (315)
T ss_dssp SSCEESCEEEEE--TT-EEEEECCEESSTTCCBCCCEEEEETTT-TEE---EECCCCS-S--CCBSCEEEEETTEEEEEC
T ss_pred CcchhceeEEEE--CC-EEEEEeCCcCCCCCcccceEEEECCCC-CcE---eECCCCC-C--cccceeEEEECCEEEEEe
Confidence 221 111122 44 444332 21100001245799999874 443 3333222 1 111122223567777773
Q ss_pred eC---CCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC---eEEEEEEECCCCc
Q 008927 319 DR---KNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG---RSYLGILDDFGHS 392 (548)
Q Consensus 319 d~---~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g---~~~L~~~dl~~g~ 392 (548)
-. ..-...++++|+.+++.+.+.+.. .+... ..... -++.||+.--.++ ...++++|+++++
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p----~~r~~---~~~~~-----~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQ----TARSL---FGATV-----HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCS----SCCBS---CEEEE-----ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCC----Cchhc---eEEEE-----ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 22 122356999999998887775321 11111 01122 2445665533222 4578999999999
Q ss_pred eEeecC-CCcee-EeeeecCCEEEEEEecC-----------CCCCeEEEEEcCCCcee
Q 008927 393 LSLLDI-PFTDI-DNITLGNDCLFVEGASG-----------VEPSSVAKVTLDDHKLK 437 (548)
Q Consensus 393 ~~~l~~-~~~~~-~~~s~d~~~l~~~~ss~-----------~~p~~l~~~d~~~~~~~ 437 (548)
++.+.. +.... ..+..-++.|++++... ....+++++|+++.+.+
T Consensus 224 W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred EEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhh
Confidence 988864 22111 11223355676666431 12357889998877653
No 450
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=92.67 E-value=0.2 Score=48.28 Aligned_cols=50 Identities=14% Similarity=0.147 Sum_probs=37.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|..++.....| .|+||++||++.... .|....+.|++ ||.|+.+|+||.
T Consensus 56 ~~~~~~~~~~g~------------~p~vv~lhG~~~~~~--~~~~~~~~L~~-~~~v~~~D~~G~ 105 (314)
T 3kxp_A 56 GRITLNVREKGS------------GPLMLFFHGITSNSA--VFEPLMIRLSD-RFTTIAVDQRGH 105 (314)
T ss_dssp SSCEEEEEEECC------------SSEEEEECCTTCCGG--GGHHHHHTTTT-TSEEEEECCTTS
T ss_pred CCEEEEEEecCC------------CCEEEEECCCCCCHH--HHHHHHHHHHc-CCeEEEEeCCCc
Confidence 677777655422 378999999986543 45556677777 699999999985
No 451
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=92.66 E-value=0.1 Score=49.57 Aligned_cols=39 Identities=10% Similarity=0.143 Sum_probs=31.6
Q ss_pred CcEEEEEccCccccccCccC-hHHHHHHhcCcEEEEeCCCCC
Q 008927 495 PPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~~~-~~~Q~~asrGyaVl~~NyRGS 535 (548)
.|.||++||.+..... |. .....|+++||.|+.+|+||-
T Consensus 43 ~~~vv~lHG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~ 82 (293)
T 3hss_A 43 GDPVVFIAGRGGAGRT--WHPHQVPAFLAAGYRCITFDNRGI 82 (293)
T ss_dssp SEEEEEECCTTCCGGG--GTTTTHHHHHHTTEEEEEECCTTS
T ss_pred CCEEEEECCCCCchhh--cchhhhhhHhhcCCeEEEEccCCC
Confidence 3789999999876543 44 456789999999999999985
No 452
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=92.62 E-value=0.081 Score=50.57 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=29.0
Q ss_pred cEEEEEccC-ccccccCccChHH-HHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHGG-PTSEARGILNLSI-QYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGG-P~~~~~~~~~~~~-Q~~asrGyaVl~~NyRGS 535 (548)
|.||++||. |.+.....|...+ ..|+.+ |.|+.+|+||-
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~ 77 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEAG-YRVILLDCPGW 77 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHTT-CEEEEECCTTS
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhcC-CeEEEEcCCCC
Confidence 489999995 6544444566666 667655 99999999984
No 453
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=92.56 E-value=0.069 Score=50.01 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=30.9
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
|.||++||.+.... .|....+.|+++||.|+.+|+||-.
T Consensus 17 ~~vvllHG~~~~~~--~~~~~~~~L~~~g~~vi~~D~~GhG 55 (247)
T 1tqh_A 17 RAVLLLHGFTGNSA--DVRMLGRFLESKGYTCHAPIYKGHG 55 (247)
T ss_dssp CEEEEECCTTCCTH--HHHHHHHHHHHTTCEEEECCCTTSS
T ss_pred cEEEEECCCCCChH--HHHHHHHHHHHCCCEEEecccCCCC
Confidence 67889999865443 3556678899999999999999843
No 454
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=92.29 E-value=0.19 Score=48.26 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=36.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccC-ccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGG-PTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGG-P~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-... +.. |.||++||. |.+.....|...++.|+.+ |.|+.+|+||-
T Consensus 24 ~g~~l~y~~~-----------g~g-~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~ 76 (296)
T 1j1i_A 24 GGVETRYLEA-----------GKG-QPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGF 76 (296)
T ss_dssp TTEEEEEEEE-----------CCS-SEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTS
T ss_pred CCEEEEEEec-----------CCC-CeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCC
Confidence 7888764432 112 578999996 6544444566667778766 99999999984
No 455
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=92.15 E-value=0.13 Score=49.77 Aligned_cols=42 Identities=10% Similarity=-0.140 Sum_probs=33.8
Q ss_pred CCcEEEEEccCccccc---cCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 494 KPPLLVKSHGGPTSEA---RGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~---~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
..|.||++||...... ...|....+.|+.+||.|+.+|++|.
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~ 50 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQL 50 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3477899999876543 34677788999999999999999964
No 456
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=92.15 E-value=0.075 Score=50.89 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=36.0
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEcc-CccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHG-GPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHG-GP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-... |+. |.||++|| |+.+.....|...+..| ++||.|+.+|.||-
T Consensus 13 ~g~~l~y~~~-----------G~g-~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~ 65 (282)
T 1iup_A 13 AGVLTNYHDV-----------GEG-QPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGF 65 (282)
T ss_dssp TTEEEEEEEE-----------CCS-SEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTS
T ss_pred CCEEEEEEec-----------CCC-CeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCC
Confidence 7877765442 112 56999999 66554333566666667 78999999999983
No 457
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=91.88 E-value=0.21 Score=46.39 Aligned_cols=52 Identities=12% Similarity=0.092 Sum_probs=38.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++....-+. .-|+||++||.+.... .|...++.|+ ++|.|+.+|+||-
T Consensus 7 ~g~~l~~~~~g~~----------~~~~vv~lHG~~~~~~--~~~~~~~~L~-~~~~v~~~D~~G~ 58 (264)
T 3ibt_A 7 NGTLMTYSESGDP----------HAPTLFLLSGWCQDHR--LFKNLAPLLA-RDFHVICPDWRGH 58 (264)
T ss_dssp TTEECCEEEESCS----------SSCEEEEECCTTCCGG--GGTTHHHHHT-TTSEEEEECCTTC
T ss_pred CCeEEEEEEeCCC----------CCCeEEEEcCCCCcHh--HHHHHHHHHH-hcCcEEEEccccC
Confidence 6777775554331 2378999999987654 4667777785 4599999999984
No 458
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=91.70 E-value=0.13 Score=48.46 Aligned_cols=39 Identities=23% Similarity=0.209 Sum_probs=31.6
Q ss_pred CcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
-|.||++||.+.... .|...+..|+++||.|+.+|+||-
T Consensus 16 ~~~vvllHG~~~~~~--~w~~~~~~L~~~~~~vi~~Dl~Gh 54 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA--DWQPVLSHLARTQCAALTLDLPGH 54 (264)
T ss_dssp BCEEEEECCTTCCGG--GGHHHHHHHTTSSCEEEEECCTTC
T ss_pred CCcEEEEcCCCCCHH--HHHHHHHHhcccCceEEEecCCCC
Confidence 378999999876553 466677888778999999999984
No 459
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=91.52 E-value=5.3 Score=39.38 Aligned_cols=123 Identities=11% Similarity=-0.040 Sum_probs=65.5
Q ss_pred cceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEee------ecCCceeeeEECCC---CCEEEEEEec
Q 008927 194 ADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLV------SGSDFYAFPRMDPR---GERMAWIEWH 264 (548)
Q Consensus 194 ~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~------~~~~~~~~p~~SPD---Gk~La~~~~~ 264 (548)
..+.|+|||+ | |+.+.. ..|++++ .++ .+.+. .+.......+++|| +++|+ +...
T Consensus 34 ~~ia~~pdG~-l-~V~e~~--------g~I~~i~--~g~---~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lY-v~~~ 97 (352)
T 2ism_A 34 WALAFLPDGG-M-LIAERP--------GRIRLFR--EGR---LSTYAELSVYHRGESGLLGLALHPRFPQEPYVY-AYRT 97 (352)
T ss_dssp EEEEECTTSC-E-EEEETT--------TEEEEEE--TTE---EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEE-EEEE
T ss_pred eEEEEcCCCe-E-EEEeCC--------CeEEEEE--CCC---ccEeecceEeecCCCCceeEEECCCCCCCCEEE-EEEe
Confidence 3567999997 3 444432 4788888 444 33332 12223445689999 66664 4422
Q ss_pred CCCCCCCCceEEEEEecCCCceeeeE-EEcCCC--CCcccCCcCceECcCCcEEEEE-eCC---------CCeeeEEEEe
Q 008927 265 HPNMPWDKAELWVGYISENGDVYKRV-CVAGFD--PTIVESPTEPKWSSKGELFFVT-DRK---------NGFWNLHKWI 331 (548)
Q Consensus 265 ~~~~p~~~~~L~v~~~~~~g~~~~~~-~l~~~~--~~~~~~~~~~~wspDG~L~~~s-d~~---------~g~~~Ly~~d 331 (548)
.... .....|+.++.+. +.+...+ ++.+.+ .........+.|+|||.||+.. +.. .....|++++
T Consensus 98 ~~~~-~~~~~v~r~~~~~-~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~ 175 (352)
T 2ism_A 98 VAEG-GLRNQVVRLRHLG-ERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLT 175 (352)
T ss_dssp ECTT-SSEEEEEEEEECS-SCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEEC
T ss_pred cCCC-CCccEEEEEEeCC-CCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEc
Confidence 1110 0125788888873 4332222 222100 0000234678999999877763 221 1224688888
Q ss_pred ccC
Q 008927 332 ESN 334 (548)
Q Consensus 332 ~~~ 334 (548)
+++
T Consensus 176 ~dG 178 (352)
T 2ism_A 176 PEG 178 (352)
T ss_dssp TTS
T ss_pred CCC
Confidence 754
No 460
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=91.48 E-value=13 Score=37.39 Aligned_cols=145 Identities=14% Similarity=0.041 Sum_probs=78.6
Q ss_pred ECCEEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCC
Q 008927 153 FGDTVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQN 232 (548)
Q Consensus 153 ~~~~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~ 232 (548)
|+..|+-. .++.|+.+++... .+...+.... ....+..+.+. .++.+..+ ..|+++|+.++.
T Consensus 96 d~~~L~v~--~~~~l~v~dv~sl-~~~~~~~~~~----~~v~~i~~~~p--~~av~~~d---------G~L~v~dl~~~~ 157 (388)
T 1xip_A 96 HGDQVLVS--TRNALYSLDLEEL-SEFRTVTSFE----KPVFQLKNVNN--TLVILNSV---------NDLSALDLRTKS 157 (388)
T ss_dssp ETTEEEEE--ESSEEEEEESSST-TCEEEEEECS----SCEEEEEECSS--EEEEEETT---------SEEEEEETTTCC
T ss_pred CCCEEEEE--cCCcEEEEEchhh-hccCccceee----cceeeEEecCC--CEEEEECC---------CCEEEEEccCCc
Confidence 66666655 4578888887642 2222222221 12334444443 24444322 479999999887
Q ss_pred ccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC---------CCCCcccCC
Q 008927 233 IQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG---------FDPTIVESP 303 (548)
Q Consensus 233 ~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~---------~~~~~~~~~ 303 (548)
...+.. .+...+|||+| ++.... ...+.+++.+ +++...+..+.. ++ ..+
T Consensus 158 ---~~~~~~---~Vs~v~WSpkG--~~vg~~--------dg~i~~~~~~-~~~~~~k~~I~~Pp~~~~~~~~~----~~V 216 (388)
T 1xip_A 158 ---TKQLAQ---NVTSFDVTNSQ--LAVLLK--------DRSFQSFAWR-NGEMEKQFEFSLPSELEELPVEE----YSP 216 (388)
T ss_dssp ---EEEEEE---SEEEEEECSSE--EEEEET--------TSCEEEEEEE-TTEEEEEEEECCCHHHHTSCTTT----SEE
T ss_pred ---cccccC---CceEEEEcCCc--eEEEEc--------CCcEEEEcCC-CccccccceecCCcccccccCCC----eeE
Confidence 444443 35678999999 343331 2346666665 343211333421 12 457
Q ss_pred cCceECcCCc-EEEEEeCC---CC----eeeEEEEeccCCe
Q 008927 304 TEPKWSSKGE-LFFVTDRK---NG----FWNLHKWIESNNE 336 (548)
Q Consensus 304 ~~~~wspDG~-L~~~sd~~---~g----~~~Ly~~d~~~g~ 336 (548)
....|.++++ ++...... +. ...+|.++...+.
T Consensus 217 ~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~~~~~ 257 (388)
T 1xip_A 217 LSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGS 257 (388)
T ss_dssp EEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEEEETTE
T ss_pred EEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEEcCCCC
Confidence 7899999998 43333221 11 3357888744443
No 461
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.35 E-value=4.5 Score=39.65 Aligned_cols=166 Identities=11% Similarity=0.083 Sum_probs=85.5
Q ss_pred ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcC----CCCCcccCCcCceE---CcCCcEEEE
Q 008927 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAG----FDPTIVESPTEPKW---SSKGELFFV 317 (548)
Q Consensus 245 ~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~----~~~~~~~~~~~~~w---spDG~L~~~ 317 (548)
+-..++|.+...++.+..+ ....|+.++.+. +...+. .+.+ .... .....+.| .|+|+|+++
T Consensus 14 yPE~~~wd~~~g~~~vs~l-------~~g~V~~~~~~~-~~~~~~-~~~~~s~~g~~~--~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNL-------YKGRIEVYNPKT-QSHFNV-VIDGASSNGDGE--QQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp CCSCEEEETTTTEEEEEET-------TTTEEEEECTTT-CCEEEE-CCTTTCCSSCCS--EEEEEEEESSSSSCCEEEEE
T ss_pred CCcCccCcCCCCEEEEEec-------cCCEEEEEcCCC-CeEEEE-ecCCccccCCCc--ceeeEEEEeccCCCCcEEEE
Confidence 3457899887666654432 246788888763 432222 2221 1101 23456789 688886665
Q ss_pred EeCC----------CCeeeEEEEecc---CCeeEeecccc--ccc-----CCCcccccCcceeeeeecCCCCEEEEEEEe
Q 008927 318 TDRK----------NGFWNLHKWIES---NNEVLAIYSLD--AEF-----SRPLWVFGINSYEIIQSHGEKNLIACSYRQ 377 (548)
Q Consensus 318 sd~~----------~g~~~Ly~~d~~---~g~~~~l~~~~--~d~-----~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~ 377 (548)
.+.+ .|...|+++|+. +++........ .+. +... .+....... ..+.+|++-..
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~--~~~nDvavD----~~GnaYVt~s~ 156 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP--FGVVQSAQD----RDGNSYVAFAL 156 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC--EEEEEEEEC----TTSCEEEEEEE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc--cCCceeEEC----CCCCEEEeCCC
Confidence 5521 245679999998 66643222100 000 0000 111223332 23456655443
Q ss_pred CCeEEEEEEECCCCceEeec--CCCc----eeEee--eecCCEEEEEEecCCCCCeEEEEEcC
Q 008927 378 NGRSYLGILDDFGHSLSLLD--IPFT----DIDNI--TLGNDCLFVEGASGVEPSSVAKVTLD 432 (548)
Q Consensus 378 ~g~~~L~~~dl~~g~~~~l~--~~~~----~~~~~--s~d~~~l~~~~ss~~~p~~l~~~d~~ 432 (548)
. ...|++++.++..+..+. .+.. ...++ .+++..|++..+ ...|+++|+.
T Consensus 157 ~-~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~----~g~L~~fD~~ 214 (334)
T 2p9w_A 157 G-MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG----PRALTAFDVS 214 (334)
T ss_dssp S-SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS----SSSEEEEECS
T ss_pred C-CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC----CCeEEEEcCC
Confidence 3 145999998766544332 2211 12233 466766655432 5789999976
No 462
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=91.19 E-value=0.42 Score=44.91 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=38.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++...+-|. +..-|.||++||-+.... .|...+..|+. +|.|+.+|+||-
T Consensus 10 ~g~~l~y~~~g~~--------~~~~~~vvllHG~~~~~~--~~~~~~~~L~~-~~~vi~~D~~G~ 63 (266)
T 2xua_A 10 NGTELHYRIDGER--------HGNAPWIVLSNSLGTDLS--MWAPQVAALSK-HFRVLRYDTRGH 63 (266)
T ss_dssp SSSEEEEEEESCS--------SSCCCEEEEECCTTCCGG--GGGGGHHHHHT-TSEEEEECCTTS
T ss_pred CCEEEEEEEcCCc--------cCCCCeEEEecCccCCHH--HHHHHHHHHhc-CeEEEEecCCCC
Confidence 7888887776542 111378999999665433 46666777865 599999999983
No 463
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.09 E-value=13 Score=36.72 Aligned_cols=160 Identities=8% Similarity=-0.012 Sum_probs=81.5
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCC---CCCCCceecceeeCCC---CCEEEEEEeccCCCCCCceeEEEEEECC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPD---YGEPLVSYADGIFDPR---FNRYVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~---~~~~~~~~~~~~~SpD---G~~i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
.|+++....++|++++.++ +..+.+... .........+++++|| ..+|++.-... ..+.|+++.+.
T Consensus 44 ~llVter~~G~I~~v~~~~--g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~------~~~~v~R~~~~ 115 (347)
T 3das_A 44 DLLVSSRDEATITRVDAKT--GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA------SDNRIVRMLYD 115 (347)
T ss_dssp CEEEEETTTCEEEEECTTT--CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS------SSEEEEEEEBC
T ss_pred cEEEEEecCCEEEEEECCC--CcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC------CCCEEEEEEeC
Confidence 5666665478999998765 444433211 0001123456789996 44543321211 13579999887
Q ss_pred CCC-----ccCcEEeee-cC--C--ceeeeEECCCCCEEEEEEecC-CC------CCCCCceEEEEEecCCCcee-----
Q 008927 230 GQN-----IQEPKVLVS-GS--D--FYAFPRMDPRGERMAWIEWHH-PN------MPWDKAELWVGYISENGDVY----- 287 (548)
Q Consensus 230 ~g~-----~~~~~~L~~-~~--~--~~~~p~~SPDGk~La~~~~~~-~~------~p~~~~~L~v~~~~~~g~~~----- 287 (548)
.+. ....+.|.. -+ . +-....|+|||+ |+ ++... .+ .......|+.++.+ |++.
T Consensus 116 ~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Ly-vt~Gd~~~~~~~qd~~~~~G~IlRi~~d--G~ip~~nPf 191 (347)
T 3das_A 116 EKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LY-AGTGESGDTGLSQDRKSLGGKILRMTPD--GEPAPGNPF 191 (347)
T ss_dssp TTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EE-EECBCTTCGGGTTCTTCSTTCEEEECTT--SSBCTTCSS
T ss_pred CCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EE-EEECCCCCCccccCCCCCCCEEEEEeCC--CCccCCCCC
Confidence 631 111333322 11 1 224578999996 54 44221 11 00124567777765 3210
Q ss_pred -eeEEEcCCCCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEe
Q 008927 288 -KRVCVAGFDPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWI 331 (548)
Q Consensus 288 -~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d 331 (548)
...+.+.+- .....+.|.|+|+||+......+...|.++.
T Consensus 192 ~~~~i~a~G~----RNp~Gla~dp~G~L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 192 PGSPVYSYGH----RNVQGLAWDDKQRLFASEFGQDTWDELNAIK 232 (347)
T ss_dssp TTCCEEEBCC----SBCCEEEECTTCCEEEEECCSSSCEEEEEEC
T ss_pred CCCeEEeeCC----CCcceEEECCCCCEEEEecCCCCCceeeEEc
Confidence 012233222 3456789999988876643223445566653
No 464
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=90.89 E-value=0.12 Score=49.65 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=32.9
Q ss_pred CCcEEEEEccCccccccCccChHHHHHHhc--CcEEEEeCCCCC
Q 008927 494 KPPLLVKSHGGPTSEARGILNLSIQYWTSR--GWAFVDVNYGGS 535 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~~~~~~~~~Q~~asr--GyaVl~~NyRGS 535 (548)
..|.||++||.+.... .|....+.|+++ ||.|+.+|+||.
T Consensus 35 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~~~g~~vi~~D~~G~ 76 (302)
T 1pja_A 35 SYKPVIVVHGLFDSSY--SFRHLLEYINETHPGTVVTVLDLFDG 76 (302)
T ss_dssp CCCCEEEECCTTCCGG--GGHHHHHHHHHHSTTCCEEECCSSCS
T ss_pred CCCeEEEECCCCCChh--HHHHHHHHHHhcCCCcEEEEeccCCC
Confidence 3477899999876543 477788899999 999999999986
No 465
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.72 E-value=5.3 Score=39.45 Aligned_cols=88 Identities=13% Similarity=-0.001 Sum_probs=43.9
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCC---CCcccCCcCceECcC-
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD---PTIVESPTEPKWSSK- 311 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~---~~~~~~~~~~~wspD- 311 (548)
.+++..+-..-....|.|||++|. +... ..+|++++.+ |.... .+.+.. ..-......+.++||
T Consensus 10 ~~~va~~l~~P~~i~~~pdG~~l~-V~e~-------~G~i~~~~~~--g~~~~--~~~~~~~v~~~g~~g~~gia~~pdf 77 (353)
T 2g8s_A 10 VEVLQDKLDHPWALAFLPDNHGML-ITLR-------GGELRHWQAG--KGLSA--PLSGVPDVWAHGQGGLLDVVLAPDF 77 (353)
T ss_dssp EEEEEEEESSEEEEEECSTTCCEE-EEET-------TTEEEEEETT--TEECC--CCBSCCCCCCSTTCSEEEEEECTTH
T ss_pred EEEEECCCCCcEEEEEcCCCCEEE-EEeC-------CceEEEEeCC--Cceee--EecCCcccccCCCCCceeEEECCCC
Confidence 344444333334567999998654 4422 2478888743 43211 111100 000023356789996
Q ss_pred ---CcEEEEE-eCC-CC--eeeEEEEeccCC
Q 008927 312 ---GELFFVT-DRK-NG--FWNLHKWIESNN 335 (548)
Q Consensus 312 ---G~L~~~s-d~~-~g--~~~Ly~~d~~~g 335 (548)
|.||+.. ... .| ...|++++++.+
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~ 108 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLSDD 108 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEECTT
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEECCC
Confidence 4466552 211 22 457888877543
No 466
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=90.66 E-value=0.14 Score=50.68 Aligned_cols=67 Identities=10% Similarity=0.080 Sum_probs=44.3
Q ss_pred CCeEEEeeccCCCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHh------cCcEEEEeCC
Q 008927 460 LPELIEFPTEVPGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTS------RGWAFVDVNY 532 (548)
Q Consensus 460 ~pe~i~~~s~~dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~as------rGyaVl~~Ny 532 (548)
..+.+++.|..-|.+...++|.|.+ |++ +.++||+|++.||+-. +. ......+.++. .+++|+.+++
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~--y~~-~~~~yPVlylldG~~~--f~-~~~~~~~~l~~~~~~~~~~~IvV~i~~ 83 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEG--YAQ-SLEAYPVVYLLDGEDQ--FD-HMASLLQFLSQGTMPQIPKVIIVGIHN 83 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTT--GGG-SCCCEEEEEESSHHHH--HH-HHHHHHHHHTCSSSCSSCCCEEEEECC
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCC--CCC-CCCCccEEEEecChhh--hH-HHHHHHHHHHhhhhcCCCCEEEEEECC
Confidence 3467778775358889999999964 653 2688999999999521 11 01112344443 3789998865
No 467
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=90.65 E-value=0.31 Score=45.93 Aligned_cols=50 Identities=18% Similarity=0.114 Sum_probs=36.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-..+-+ -|.||++||.+.... .|...++.|++ +|.|+.+|+||.
T Consensus 16 ~g~~l~~~~~g~------------~~~vv~lHG~~~~~~--~~~~~~~~l~~-~~~vi~~D~~G~ 65 (297)
T 2qvb_A 16 AGKRMAYIDEGK------------GDAIVFQHGNPTSSY--LWRNIMPHLEG-LGRLVACDLIGM 65 (297)
T ss_dssp TTEEEEEEEESS------------SSEEEEECCTTCCGG--GGTTTGGGGTT-SSEEEEECCTTS
T ss_pred CCEEEEEEecCC------------CCeEEEECCCCchHH--HHHHHHHHHhh-cCeEEEEcCCCC
Confidence 788877555421 288999999987654 35555666765 499999999984
No 468
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=90.60 E-value=0.18 Score=49.83 Aligned_cols=46 Identities=17% Similarity=0.154 Sum_probs=29.4
Q ss_pred CCcEEEEEccCccccccC-ccChHHHHHHhcCcEEEEeCCCCC-CCCCh
Q 008927 494 KPPLLVKSHGGPTSEARG-ILNLSIQYWTSRGWAFVDVNYGGS-TGLSS 540 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~~~-~~~~~~Q~~asrGyaVl~~NyRGS-tGyG~ 540 (548)
..|+||++||-..+.... .|....+.| ++||.|+.+|.|.. .|||+
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~ 84 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGP 84 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCS
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCC
Confidence 347889999965433222 233455666 78999999976432 45664
No 469
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=90.36 E-value=0.1 Score=50.51 Aligned_cols=63 Identities=21% Similarity=0.157 Sum_probs=39.9
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEcc-CccccccCccChHHHHHHhc--CcEEEEeCC---CCCCCCChhh
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHG-GPTSEARGILNLSIQYWTSR--GWAFVDVNY---GGSTGLSSVP 542 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHG-GP~~~~~~~~~~~~Q~~asr--GyaVl~~Ny---RGStGyG~~f 542 (548)
.+.....|...|.. +++++||||+.|| |-. ...|....+.|+.+ ++.|+.||- ....|+|+.|
T Consensus 48 ~~~~~l~y~~~p~~------~~~~~plVI~LHG~G~~---~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~W 116 (285)
T 4fhz_A 48 IMTRKLTFGRRGAA------PGEATSLVVFLHGYGAD---GADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQW 116 (285)
T ss_dssp CCCCCCCEEEEESC------TTCCSEEEEEECCTTBC---HHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEES
T ss_pred cccccceeecCCCC------CCCCCcEEEEEcCCCCC---HHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccc
Confidence 44445556666643 3678999999999 422 22344456777765 999999872 2334566554
No 470
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=90.35 E-value=0.19 Score=49.43 Aligned_cols=43 Identities=14% Similarity=0.041 Sum_probs=34.1
Q ss_pred CCcEEEEEccCcccccc----CccChHHHHHHhcCcEEEEeCCCCCC
Q 008927 494 KPPLLVKSHGGPTSEAR----GILNLSIQYWTSRGWAFVDVNYGGST 536 (548)
Q Consensus 494 ~~Pliv~iHGGP~~~~~----~~~~~~~Q~~asrGyaVl~~NyRGSt 536 (548)
..|.||++||....... ..|....+.|+.+||.|+.+|++|..
T Consensus 7 ~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g 53 (320)
T 1ys1_X 7 TRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQ 53 (320)
T ss_dssp CSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSC
T ss_pred CCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCC
Confidence 44779999998765422 45677889999999999999999753
No 471
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=90.30 E-value=0.19 Score=45.82 Aligned_cols=40 Identities=23% Similarity=0.109 Sum_probs=30.2
Q ss_pred CCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEe--CCCCC
Q 008927 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV--NYGGS 535 (548)
Q Consensus 493 ~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~--NyRGS 535 (548)
++.|+||++||++... ..|....+.|+. ||.|+.+ +.||.
T Consensus 36 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~-g~~v~~~~~d~~g~ 77 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNE--LDLLPLAEIVDS-EASVLSVRGNVLEN 77 (226)
T ss_dssp TTSCEEEEECCTTCCT--TTTHHHHHHHHT-TSCEEEECCSEEET
T ss_pred CCCcEEEEEecCCCCh--hHHHHHHHHhcc-CceEEEecCcccCC
Confidence 4579999999998543 345566677887 9999999 66653
No 472
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=90.20 E-value=0.49 Score=45.95 Aligned_cols=52 Identities=17% Similarity=0.161 Sum_probs=37.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|..++-...-+ +. .|.||++||.|.+.. .|...+..|+.+ |-|+.+|.||-
T Consensus 15 ~g~~l~y~~~G~---------g~-~~pvvllHG~~~~~~--~w~~~~~~L~~~-~~via~Dl~G~ 66 (316)
T 3afi_E 15 LGSSMAYRETGA---------QD-APVVLFLHGNPTSSH--IWRNILPLVSPV-AHCIAPDLIGF 66 (316)
T ss_dssp TTEEEEEEEESC---------TT-SCEEEEECCTTCCGG--GGTTTHHHHTTT-SEEEEECCTTS
T ss_pred CCEEEEEEEeCC---------CC-CCeEEEECCCCCchH--HHHHHHHHHhhC-CEEEEECCCCC
Confidence 687776555422 21 257999999997654 466667778755 99999999984
No 473
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=90.19 E-value=0.15 Score=48.71 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=30.0
Q ss_pred cEEEEEccC-ccccccCccChHH-HHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHGG-PTSEARGILNLSI-QYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGG-P~~~~~~~~~~~~-Q~~asrGyaVl~~NyRGS 535 (548)
|.||++||. |.+.....|...+ ..|+.+ |.|+.+|+||-
T Consensus 34 ~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~ 74 (286)
T 2puj_A 34 ETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGF 74 (286)
T ss_dssp SEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTS
T ss_pred CcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCC
Confidence 679999997 6544444566667 778766 99999999983
No 474
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.15 E-value=16 Score=36.20 Aligned_cols=195 Identities=14% Similarity=0.126 Sum_probs=94.5
Q ss_pred cceeeCCCCCEEEEEEeccCCC-----CCCceeEEEEEECCC--CCccCcEEeee-c--C---Cce-eeeEE--CCCCCE
Q 008927 194 ADGIFDPRFNRYVTVREDRRQD-----ALNSTTEIVAIALNG--QNIQEPKVLVS-G--S---DFY-AFPRM--DPRGER 257 (548)
Q Consensus 194 ~~~~~SpDG~~i~~v~~~~~~~-----~~~~~~~l~~idl~~--g~~~~~~~L~~-~--~---~~~-~~p~~--SPDGk~ 257 (548)
.|+...|+| ++|++...... ..+....|+++|+++ ++ .+.|.. + . +|. -...+ ..||+.
T Consensus 53 EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~---~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 53 EDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA---VSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCC---EEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred ceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc---eEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 355677876 34554321100 001356899999984 34 444432 2 1 121 11122 246774
Q ss_pred EEEEEecCCCCCCCCceEEEEEecCCCc-eeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeC--------------CC
Q 008927 258 MAWIEWHHPNMPWDKAELWVGYISENGD-VYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR--------------KN 322 (548)
Q Consensus 258 La~~~~~~~~~p~~~~~L~v~~~~~~g~-~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~--------------~~ 322 (548)
-.|+. +|+. ..+.+-+++++.++. ..-...+.+.. ..+.......+||++|+..+. +.
T Consensus 128 ~L~Vv-nh~~---~~s~ielf~~d~~~~~~~~~~~~~g~~---~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 128 YLLVV-NHPG---SSSTVEVFKFQEEEKSLLHLKTIRHKL---LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGL 200 (355)
T ss_dssp EEEEE-ECST---TCCEEEEEEEETTTTEEEEEEEECCTT---CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTC
T ss_pred EEEEE-ECCC---CCCeEEEEEEECCCCEEEEEeccccCC---CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccC
Confidence 44565 4442 234444444443333 21122233322 134566788899988776542 12
Q ss_pred CeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECC-CCceE---eecC
Q 008927 323 GFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDF-GHSLS---LLDI 398 (548)
Q Consensus 323 g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~-~g~~~---~l~~ 398 (548)
....||+++. ++.+.+.. ++..| +..+++| |++.||++-. ...+|++++++ +|++. .+..
T Consensus 201 ~~g~vyr~d~--~~~~~~~~---~l~~p------NGia~sp---Dg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~~~ 264 (355)
T 3sre_A 201 AWSFVTYYSP--NDVRVVAE---GFDFA------NGINISP---DGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVLSF 264 (355)
T ss_dssp CCEEEEEECT--TCCEEEEE---EESSE------EEEEECT---TSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEEC
T ss_pred CccEEEEEEC--CeEEEeec---CCccc------CcceECC---CCCEEEEEeC--CCCeEEEEEECCCCcEecCEEEeC
Confidence 4567999987 35554432 11111 2355665 7788887543 33467777764 34433 2222
Q ss_pred CCceeEeeeec--CCEEEEEE
Q 008927 399 PFTDIDNITLG--NDCLFVEG 417 (548)
Q Consensus 399 ~~~~~~~~s~d--~~~l~~~~ 417 (548)
+ ....++..| ++.+++.+
T Consensus 265 ~-g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 265 D-TLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp S-SEEEEEEECTTTCCEEEEE
T ss_pred C-CCCceEEEeCCCCcEEEEe
Confidence 1 223445443 25566644
No 475
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=90.06 E-value=0.28 Score=48.22 Aligned_cols=58 Identities=10% Similarity=-0.087 Sum_probs=40.2
Q ss_pred CeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccC-hHHHHHHhcCcEEEEeCCCCC
Q 008927 472 GQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 472 G~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~-~~~Q~~asrGyaVl~~NyRGS 535 (548)
+..+.+.|+.|.+ +. .+. .+.||++||....... .|. ...++|+++||.|+.+|+||.
T Consensus 13 ~~~l~~~i~~p~~--~~--~~~-~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~ 71 (317)
T 1tca_A 13 KSVLDAGLTCQGA--SP--SSV-SKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPF 71 (317)
T ss_dssp HHHHHHTEEETTB--CT--TSC-SSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTT
T ss_pred HHHHhheeeCCCC--CC--CCC-CCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCC
Confidence 4446666777753 32 123 3568999998765432 254 667889999999999999984
No 476
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=89.99 E-value=0.32 Score=45.99 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=37.8
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccc---cCccCh-HHHHHHhcCcEEEEeCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEA---RGILNL-SIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~---~~~~~~-~~Q~~asrGyaVl~~NyRG 534 (548)
+|.+++-...-+. ....|+||++||.+.... ...|.. ..+.|+. +|.|+.+|+||
T Consensus 19 ~~~~l~y~~~G~~--------~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G 77 (286)
T 2qmq_A 19 PYGSVTFTVYGTP--------KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPG 77 (286)
T ss_dssp TTEEEEEEEESCC--------CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTT
T ss_pred CCeEEEEEeccCC--------CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCC
Confidence 6888877665431 113488999999987653 222432 5566765 69999999999
No 477
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=89.93 E-value=0.49 Score=45.00 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=36.1
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
+|.+++.....+ |...|.||++||.+.... .|...+..|+ ++|-|+.+|.||
T Consensus 12 ~g~~l~y~~~~~---------G~~~p~vvllHG~~~~~~--~w~~~~~~L~-~~~rvia~DlrG 63 (276)
T 2wj6_A 12 FDNKLSYIDNQR---------DTDGPAILLLPGWCHDHR--VYKYLIQELD-ADFRVIVPNWRG 63 (276)
T ss_dssp TTEEEEEEECCC---------CCSSCEEEEECCTTCCGG--GGHHHHHHHT-TTSCEEEECCTT
T ss_pred CCeEEEEEEecC---------CCCCCeEEEECCCCCcHH--HHHHHHHHHh-cCCEEEEeCCCC
Confidence 788776544321 112378999999886543 4556666776 579999999998
No 478
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=89.80 E-value=0.21 Score=47.43 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=26.8
Q ss_pred cEEEEEcc-CccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHG-GPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHG-GP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
|+||++|| |..+ ....|......|+ +||.|+.+|+||-
T Consensus 42 p~vv~lHG~G~~~-~~~~~~~~~~~L~-~~~~vi~~D~~G~ 80 (292)
T 3l80_A 42 PCFVFLSGAGFFS-TADNFANIIDKLP-DSIGILTIDAPNS 80 (292)
T ss_dssp SEEEEECCSSSCC-HHHHTHHHHTTSC-TTSEEEEECCTTS
T ss_pred CEEEEEcCCCCCc-HHHHHHHHHHHHh-hcCeEEEEcCCCC
Confidence 89999997 4322 2224555555565 7999999999983
No 479
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=89.65 E-value=0.1 Score=48.65 Aligned_cols=38 Identities=11% Similarity=0.101 Sum_probs=28.6
Q ss_pred cEEEEEccCccccccCccChHHHHHHh-cCcEEEEeCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~as-rGyaVl~~NyRGS 535 (548)
|.||++||.+.... .|......|+. +||.|+.+|+||-
T Consensus 22 ~~vv~lhG~~~~~~--~~~~~~~~l~~~~g~~v~~~d~~G~ 60 (272)
T 3fsg_A 22 TPIIFLHGLSLDKQ--STCLFFEPLSNVGQYQRIYLDLPGM 60 (272)
T ss_dssp SEEEEECCTTCCHH--HHHHHHTTSTTSTTSEEEEECCTTS
T ss_pred CeEEEEeCCCCcHH--HHHHHHHHHhccCceEEEEecCCCC
Confidence 67899999876543 24444555776 7999999999983
No 480
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=89.56 E-value=0.26 Score=45.85 Aligned_cols=39 Identities=15% Similarity=0.078 Sum_probs=29.7
Q ss_pred CCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 493 ~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
...|.||++||++.. ...|......|+.+ |.|+.+|+||
T Consensus 18 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~-~~v~~~d~~G 56 (267)
T 3fla_A 18 DARARLVCLPHAGGS--ASFFFPLAKALAPA-VEVLAVQYPG 56 (267)
T ss_dssp TCSEEEEEECCTTCC--GGGGHHHHHHHTTT-EEEEEECCTT
T ss_pred CCCceEEEeCCCCCC--chhHHHHHHHhccC-cEEEEecCCC
Confidence 456999999999764 33455666677655 9999999997
No 481
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=89.42 E-value=0.66 Score=46.39 Aligned_cols=134 Identities=11% Similarity=-0.006 Sum_probs=51.0
Q ss_pred eEEEEEECCCCCccCcEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcc
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIV 300 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~ 300 (548)
..|+.+|+.+|+ ...-.........| +.+||+.++ .. . ....|+.+|.++ |+. ..........
T Consensus 19 g~v~a~d~~tG~---~~W~~~~~~~~s~p-~~~~g~~~v-~~-s------~dg~l~a~d~~t-G~~--~w~~~~~~~~-- 81 (369)
T 2hz6_A 19 GSLHAVSKRTGS---IKWTLKEDPVLQVP-THVEEPAFL-PD-P------NDGSLYTLGSKN-NEG--LTKLPFTIPE-- 81 (369)
T ss_dssp SEEEEEETTTCC---EEEEEECCCSCCCC------CCEE-EC-T------TTCCEEEC------CC--SEECSCCHHH--
T ss_pred CEEEEEECCCCC---EEEEecCCCceecc-eEcCCCEEE-Ee-C------CCCEEEEEECCC-Cce--eeeeeccCcc--
Confidence 379999999997 43323332233444 345665433 32 1 135699998863 541 1111111000
Q ss_pred cCCcCceECcCCcEEEEEeCCCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCe
Q 008927 301 ESPTEPKWSSKGELFFVTDRKNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGR 380 (548)
Q Consensus 301 ~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~ 380 (548)
.....|..+.|+.+|+.+.. ..|+.+|+++|+...-..... . ....| +++.|++... .
T Consensus 82 ~~~~sp~~~~~~~v~~g~~d----g~v~a~D~~tG~~~w~~~~~~------~------~~~~p---~~~~v~~~~~---d 139 (369)
T 2hz6_A 82 LVQASPCRSSDGILYMGKKQ----DIWYVIDLLTGEKQQTLSSAF------A------DSLSP---STSLLYLGRT---E 139 (369)
T ss_dssp HHTTCSCC-----CCCCEEE----EEEEEECCC-------------------------------------EEEEEE---E
T ss_pred ccccCceEecCCEEEEEeCC----CEEEEEECCCCcEEEEecCCC------c------ccccc---cCCEEEEEec---C
Confidence 11223433334445443322 369999998887643221100 0 01122 4556665432 2
Q ss_pred EEEEEEECCCCce
Q 008927 381 SYLGILDDFGHSL 393 (548)
Q Consensus 381 ~~L~~~dl~~g~~ 393 (548)
..|+.+|.++|+.
T Consensus 140 g~v~a~d~~tG~~ 152 (369)
T 2hz6_A 140 YTITMYDTKTREL 152 (369)
T ss_dssp EEEECCCSSSSSC
T ss_pred CEEEEEECCCCCE
Confidence 5688999988864
No 482
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=89.25 E-value=0.32 Score=47.20 Aligned_cols=38 Identities=21% Similarity=0.221 Sum_probs=29.6
Q ss_pred cEEEEEccCccccccCccChHHHHHHh-cCcEEEEeCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTS-RGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~as-rGyaVl~~NyRGS 535 (548)
|.||++||++.+.. .|...+..|+. .+|.|+.+|+||-
T Consensus 39 p~lvllHG~~~~~~--~w~~~~~~L~~~~~~~via~Dl~Gh 77 (316)
T 3c5v_A 39 PVLLLLHGGGHSAL--SWAVFTAAIISRVQCRIVALDLRSH 77 (316)
T ss_dssp CEEEEECCTTCCGG--GGHHHHHHHHTTBCCEEEEECCTTS
T ss_pred cEEEEECCCCcccc--cHHHHHHHHhhcCCeEEEEecCCCC
Confidence 78999999875443 45566677876 3999999999984
No 483
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.96 E-value=27 Score=37.23 Aligned_cols=80 Identities=14% Similarity=0.062 Sum_probs=40.3
Q ss_pred eeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEEEEEEECCCCceE-eecCCCcee
Q 008927 325 WNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSYLGILDDFGHSLS-LLDIPFTDI 403 (548)
Q Consensus 325 ~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~L~~~dl~~g~~~-~l~~~~~~~ 403 (548)
..|+.+|+.+|++.--.+. ..+.|. + ...- .++.+++ ...+ ..|+.+|.++|++. +...+...+
T Consensus 453 G~l~A~D~~tG~~~W~~~~----~~~~~~-g--~~~t-----agg~vf~-gt~d--g~l~A~D~~tG~~lW~~~l~~g~~ 517 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKME----RFAVWG-G--TMAT-----AGDLVFY-GTLD--GYLKARDSDTGDLLWKFKIPSGAI 517 (599)
T ss_dssp EEEEEECTTTCCEEEEEEE----SSCCCS-B--CEEE-----TTTEEEE-ECTT--SEEEEEETTTCCEEEEEECSSCCC
T ss_pred CeEEEEECCCCCEEeEecC----CCCccC-c--ceEe-----cCCEEEE-ECCC--CeEEEEECCCCCEEEEeeCCCCcE
Confidence 4677888877775432221 112221 0 0111 4555544 4333 46899999999754 333333222
Q ss_pred -Eee--eecCCEEEEEEec
Q 008927 404 -DNI--TLGNDCLFVEGAS 419 (548)
Q Consensus 404 -~~~--s~d~~~l~~~~ss 419 (548)
.++ ..+++.++.+.+.
T Consensus 518 ~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp SCCEEEEETTEEEEEEEEC
T ss_pred eccEEEEeCCEEEEEEEcc
Confidence 233 3566655555554
No 484
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.96 E-value=16 Score=34.78 Aligned_cols=201 Identities=7% Similarity=-0.110 Sum_probs=97.7
Q ss_pred eEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEEeeecCC-
Q 008927 166 RLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKVLVSGSD- 244 (548)
Q Consensus 166 ~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~L~~~~~- 244 (548)
.+|++++.. .+-+.+.+.. ..|...-...-++ .|+.+-...........++++++|+.+.+ -+.+...+.
T Consensus 68 ~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~ 138 (315)
T 4asc_A 68 YFLQFDHLD--SEWLGMPPLP---SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSFK---WGESDPLPYV 138 (315)
T ss_dssp EEEEEETTT--TEEEECCCBS---SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTTE---EEECCCCSSC
T ss_pred ceEEecCCC--CeEEECCCCC---cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCCc---EeECCCCCCc
Confidence 489999886 5556665542 1232221112244 44433211100112345789999999886 455543221
Q ss_pred ceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCcCceECcCCcEEEEEeC-CCC
Q 008927 245 FYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPTEPKWSSKGELFFVTDR-KNG 323 (548)
Q Consensus 245 ~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~wspDG~L~~~sd~-~~g 323 (548)
........-+++ |..+.-...+. -...+++++|... .++. .+...+ . .........-+++||++.-. ..+
T Consensus 139 r~~~~~~~~~~~-iyv~GG~~~~~-~~~~~~~~yd~~~-~~W~---~~~~~p-~--~r~~~~~~~~~~~iyv~GG~~~~~ 209 (315)
T 4asc_A 139 VYGHTVLSHMDL-VYVIGGKGSDR-KCLNKMCVYDPKK-FEWK---ELAPMQ-T--ARSLFGATVHDGRIIVAAGVTDTG 209 (315)
T ss_dssp CBSCEEEEETTE-EEEECCBCTTS-CBCCCEEEEETTT-TEEE---ECCCCS-S--CCBSCEEEEETTEEEEEEEECSSS
T ss_pred ccceeEEEECCE-EEEEeCCCCCC-cccceEEEEeCCC-CeEE---ECCCCC-C--chhceEEEEECCEEEEEeccCCCC
Confidence 111112223454 44333110110 1245799999874 4432 333221 0 11111222346777777422 122
Q ss_pred -eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeC------------CeEEEEEEECCC
Q 008927 324 -FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQN------------GRSYLGILDDFG 390 (548)
Q Consensus 324 -~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~------------g~~~L~~~dl~~ 390 (548)
...++.+|+++++.+.+.+.. .+... ...... ++.||+..-.+ ....++++|+++
T Consensus 210 ~~~~~~~yd~~~~~W~~~~~~p----~~r~~---~~~~~~-----~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 277 (315)
T 4asc_A 210 LTSSAEVYSITDNKWAPFEAFP----QERSS---LSLVSL-----VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE 277 (315)
T ss_dssp EEEEEEEEETTTTEEEEECCCS----SCCBS---CEEEEE-----TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT
T ss_pred ccceEEEEECCCCeEEECCCCC----Ccccc---eeEEEE-----CCEEEEECCccccCcCCccccccccCcEEEecCCC
Confidence 346999999999888775321 11111 011222 34555443221 135688999998
Q ss_pred CceEee
Q 008927 391 HSLSLL 396 (548)
Q Consensus 391 g~~~~l 396 (548)
++++.+
T Consensus 278 ~~W~~~ 283 (315)
T 4asc_A 278 KKWEGV 283 (315)
T ss_dssp TEEEEE
T ss_pred Chhhhh
Confidence 888877
No 485
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=88.42 E-value=0.082 Score=50.27 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=30.1
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
|.||++||.+.+.. .|...++.|+ +||.|+.+|+||-
T Consensus 26 p~vv~lHG~~~~~~--~~~~~~~~l~-~g~~v~~~D~~G~ 62 (304)
T 3b12_A 26 PALLLLHGFPQNLH--MWARVAPLLA-NEYTVVCADLRGY 62 (304)
Confidence 77999999986543 4666677787 8999999999983
No 486
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=88.67 E-value=13 Score=38.18 Aligned_cols=88 Identities=8% Similarity=0.012 Sum_probs=45.6
Q ss_pred cEEeeecCCceeeeEECCCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEEEcCCC----CCcccCCcCceECcC
Q 008927 236 PKVLVSGSDFYAFPRMDPRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD----PTIVESPTEPKWSSK 311 (548)
Q Consensus 236 ~~~L~~~~~~~~~p~~SPDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~----~~~~~~~~~~~wspD 311 (548)
.+++.++-..-...+|.|||+ |. +... ...+|++++.. +|.......+.... .. .....++|+||
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~-l~-V~e~------~gg~I~~~~~~-~g~~~~~~~~~~~~~~~~g~--~Gllgia~~Pd 87 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQ-IW-LTER------ATGKILRVNPE-SGSVKTVFQVPEIVNDADGQ--NGLLGFAFHPD 87 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSC-EE-EEET------TTCEEEEECTT-TCCEEEEEECTTCCCCTTSS--CSEEEEEECTT
T ss_pred EEEEECCCCCceEEEEcCCCc-EE-EEEc------CCCEEEEEECC-CCcEeEEecCCccccccCCC--CceeEEEECCC
Confidence 445555444445678999998 33 4322 13468888754 35432222222110 01 23346789995
Q ss_pred ----CcEEEEEeC------CC---CeeeEEEEeccC
Q 008927 312 ----GELFFVTDR------KN---GFWNLHKWIESN 334 (548)
Q Consensus 312 ----G~L~~~sd~------~~---g~~~Ly~~d~~~ 334 (548)
|.||+.... +. ....|++++.+.
T Consensus 88 f~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~ 123 (454)
T 1cru_A 88 FKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNK 123 (454)
T ss_dssp TTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEET
T ss_pred cCcCCEEEEEEeccccCCCccccccccEEEEEEECC
Confidence 446665321 00 145788888654
No 487
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=88.64 E-value=0.56 Score=44.37 Aligned_cols=50 Identities=14% Similarity=0.110 Sum_probs=36.2
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
||.+++-..+-+ -|.||++||.+.... .|......|+++ |.|+.+|+||-
T Consensus 17 ~g~~l~~~~~g~------------~~~vv~lHG~~~~~~--~~~~~~~~L~~~-~~vi~~D~~G~ 66 (302)
T 1mj5_A 17 KGRRMAYIDEGT------------GDPILFQHGNPTSSY--LWRNIMPHCAGL-GRLIACDLIGM 66 (302)
T ss_dssp TTEEEEEEEESC------------SSEEEEECCTTCCGG--GGTTTGGGGTTS-SEEEEECCTTS
T ss_pred CCEEEEEEEcCC------------CCEEEEECCCCCchh--hhHHHHHHhccC-CeEEEEcCCCC
Confidence 888877554321 278999999987554 355555667665 89999999983
No 488
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=88.59 E-value=0.15 Score=47.46 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=29.9
Q ss_pred CCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEe--CCCCCCC
Q 008927 493 EKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDV--NYGGSTG 537 (548)
Q Consensus 493 ~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~--NyRGStG 537 (548)
++.|+||++||+..... .|....+.|+. +|.|+.+ ++||..+
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~~~~~~l~~-~~~v~~~~~d~~g~g~ 103 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFFDFGARLLP-QATILSPVGDVSEHGA 103 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHHHHHHHHST-TSEEEEECCSEEETTE
T ss_pred CCCcEEEEEeCCCCCHh--HHHHHHHhcCC-CceEEEecCCcCCCCC
Confidence 45699999999875433 34555667766 5999999 6666543
No 489
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.53 E-value=17 Score=34.61 Aligned_cols=190 Identities=9% Similarity=0.016 Sum_probs=98.1
Q ss_pred eEEEEEECCCCCccCcEEeeecCC---ceeeeEECCCCCEEEEEE-ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCC
Q 008927 221 TEIVAIALNGQNIQEPKVLVSGSD---FYAFPRMDPRGERMAWIE-WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFD 296 (548)
Q Consensus 221 ~~l~~idl~~g~~~~~~~L~~~~~---~~~~p~~SPDGk~La~~~-~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~ 296 (548)
.+++++|+.+++ -+.+...+. ......+ +++ |..+. .+.... -....++++|... .++ ..+...+
T Consensus 78 ~~~~~~d~~~~~---W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~-~~~~~~~~yd~~~-~~W---~~~~~~p 146 (318)
T 2woz_A 78 SYFFQLDNVSSE---WVGLPPLPSARCLFGLGEV--DDK-IYVVAGKDLQTE-ASLDSVLCYDPVA-AKW---SEVKNLP 146 (318)
T ss_dssp BEEEEEETTTTE---EEECSCBSSCBCSCEEEEE--TTE-EEEEEEEBTTTC-CEEEEEEEEETTT-TEE---EEECCCS
T ss_pred ccEEEEeCCCCc---EEECCCCCccccccceEEE--CCE-EEEEcCccCCCC-cccceEEEEeCCC-CCE---eECCCCC
Confidence 469999999887 455543221 1222222 454 44333 221110 0135789999874 443 3333222
Q ss_pred CCcccCCcCceECcCCcEEEEE--eC-CCCeeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEE
Q 008927 297 PTIVESPTEPKWSSKGELFFVT--DR-KNGFWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIAC 373 (548)
Q Consensus 297 ~~~~~~~~~~~wspDG~L~~~s--d~-~~g~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~ 373 (548)
.. .... .....+++||++. +. ..-...++.+|+.+++.+.+.+.. .+.... ..... ++.||+
T Consensus 147 ~~--r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p----~~r~~~---~~~~~-----~~~iyv 211 (318)
T 2woz_A 147 IK--VYGH-NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK----TPRSMF---GVAIH-----KGKIVI 211 (318)
T ss_dssp SC--EESC-EEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS----SCCBSC---EEEEE-----TTEEEE
T ss_pred Cc--cccc-EEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC----CCcccc---eEEEE-----CCEEEE
Confidence 01 1111 1223577777773 21 112456999999999888775321 111110 11222 345555
Q ss_pred EEE-eCC--eEEEEEEECCCCceEeecC-CCcee-EeeeecCCEEEEEEecC-----------CCCCeEEEEEcCCCce
Q 008927 374 SYR-QNG--RSYLGILDDFGHSLSLLDI-PFTDI-DNITLGNDCLFVEGASG-----------VEPSSVAKVTLDDHKL 436 (548)
Q Consensus 374 ~~~-~~g--~~~L~~~dl~~g~~~~l~~-~~~~~-~~~s~d~~~l~~~~ss~-----------~~p~~l~~~d~~~~~~ 436 (548)
..- .+. ...++++|+++++++.+.. +.... ..+..-++.|++++... ....+++++|+++.+.
T Consensus 212 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 212 AGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 432 221 3578899999999988763 22111 12223455677665432 1246889999887765
No 490
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.25 E-value=29 Score=36.87 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=32.5
Q ss_pred eEEEEEEECCCCceE-eecCCCceeE-eeeecCCEEEEEEecCCCCCeEEEEEcCCCce
Q 008927 380 RSYLGILDDFGHSLS-LLDIPFTDID-NITLGNDCLFVEGASGVEPSSVAKVTLDDHKL 436 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~-~l~~~~~~~~-~~s~d~~~l~~~~ss~~~p~~l~~~d~~~~~~ 436 (548)
...|+.+|+.+|++. +...+..... .+...++.+++ ++ ....|+.+|.++|+.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~-gt---~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFY-GT---LDGYLKARDSDTGDL 506 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE-EC---TTSEEEEEETTTCCE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEE-EC---CCCeEEEEECCCCCE
Confidence 367999999999754 2322222222 23455665544 43 246899999998873
No 491
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=87.36 E-value=0.45 Score=44.67 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=29.1
Q ss_pred cEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 496 PLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 496 Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
|.||++||.+.... .|...+..|+.+ |.|+.+|.||-
T Consensus 17 ~~vvllHG~~~~~~--~~~~~~~~L~~~-~~vi~~Dl~G~ 53 (269)
T 2xmz_A 17 QVLVFLHGFLSDSR--TYHNHIEKFTDN-YHVITIDLPGH 53 (269)
T ss_dssp EEEEEECCTTCCGG--GGTTTHHHHHTT-SEEEEECCTTS
T ss_pred CeEEEEcCCCCcHH--HHHHHHHHHhhc-CeEEEecCCCC
Confidence 35999999987654 456667778765 99999999984
No 492
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=87.30 E-value=0.44 Score=45.59 Aligned_cols=50 Identities=18% Similarity=0.074 Sum_probs=36.5
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|.+++-... |+ -|.||++||.|.+.. .|...+..|+.+ |-|+.+|.||-
T Consensus 17 ~g~~l~y~~~-----------G~-g~~lvllHG~~~~~~--~w~~~~~~L~~~-~~via~Dl~G~ 66 (294)
T 1ehy_A 17 PDVKIHYVRE-----------GA-GPTLLLLHGWPGFWW--EWSKVIGPLAEH-YDVIVPDLRGF 66 (294)
T ss_dssp SSCEEEEEEE-----------EC-SSEEEEECCSSCCGG--GGHHHHHHHHTT-SEEEEECCTTS
T ss_pred CCEEEEEEEc-----------CC-CCEEEEECCCCcchh--hHHHHHHHHhhc-CEEEecCCCCC
Confidence 7877765432 11 267999999987553 466667778776 99999999984
No 493
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=87.22 E-value=1.4 Score=42.15 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=35.3
Q ss_pred CCeEEEEEEEcCCCCCCCCCCCCCCcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCCC
Q 008927 471 PGQKAYAYYYPPSNPIYQASPEEKPPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGGS 535 (548)
Q Consensus 471 dG~~i~g~l~~P~~~~~~~~~~~~~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRGS 535 (548)
+|..++-... +.. |.||++||.|.... .|....+.| ++||.|+.+|.||-
T Consensus 13 ~~~~~~~~~~-----------g~g-~~~vllHG~~~~~~--~w~~~~~~l-~~~~~vi~~Dl~G~ 62 (291)
T 3qyj_A 13 TEARINLVKA-----------GHG-APLLLLHGYPQTHV--MWHKIAPLL-ANNFTVVATDLRGY 62 (291)
T ss_dssp SSCEEEEEEE-----------CCS-SEEEEECCTTCCGG--GGTTTHHHH-TTTSEEEEECCTTS
T ss_pred CCeEEEEEEc-----------CCC-CeEEEECCCCCCHH--HHHHHHHHH-hCCCEEEEEcCCCC
Confidence 6777775432 112 56889999997654 355556666 46999999999983
No 494
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=87.15 E-value=24 Score=34.71 Aligned_cols=149 Identities=11% Similarity=0.059 Sum_probs=73.7
Q ss_pred EEEEEeCCCCeEEEEeCCCCCCCceecCCCCCCCCceecce----eeCCCCCE--EEEEEeccCCCCCCceeEEEEEECC
Q 008927 156 TVIFSNYKDQRLYKHSIDSKDSSPLPITPDYGEPLVSYADG----IFDPRFNR--YVTVREDRRQDALNSTTEIVAIALN 229 (548)
Q Consensus 156 ~i~F~~~~~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~----~~SpDG~~--i~~v~~~~~~~~~~~~~~l~~idl~ 229 (548)
.++...++.+.|++++++| ...+.|... ++.+. .+.-.|+. |+++.+... + ..+-.||.+|.+
T Consensus 41 s~ii~t~k~~gL~Vydl~G--~~l~~~~~g------~~nnVD~r~~~~l~g~~~dla~as~R~~-~--~n~l~vf~iDp~ 109 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSLDG--KMLHSYNTG------KLNNVDIRYDFPLNGKKVDIAAASNRSE-G--KNTIEIYAIDGK 109 (355)
T ss_dssp CEEEEEETTTEEEEEETTS--CEEEEECCS------CEEEEEEEEEEEETTEEEEEEEEEECST-T--CCEEEEEEECTT
T ss_pred cEEEEEcCCCCEEEEcCCC--cEEEEccCC------CcccEEEecccccCCceEeEEEEeCCCC-C--CCeEEEEEECCC
Confidence 3455555667899999986 556666542 22221 23224554 566644320 0 123456777777
Q ss_pred CCCccCcEEeeec-----C--CceeeeEE--CCC-CCEEEEEEecCCCCCCCCceEEEEEe--cCCCceee--eEEEcCC
Q 008927 230 GQNIQEPKVLVSG-----S--DFYAFPRM--DPR-GERMAWIEWHHPNMPWDKAELWVGYI--SENGDVYK--RVCVAGF 295 (548)
Q Consensus 230 ~g~~~~~~~L~~~-----~--~~~~~p~~--SPD-Gk~La~~~~~~~~~p~~~~~L~v~~~--~~~g~~~~--~~~l~~~ 295 (548)
+++ .+.+... . ......++ +|+ |+..+|+... ...+..+++ ..+|.+.. .+.+.-.
T Consensus 110 ~~~---l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-------~G~~~q~~l~~~~~g~~~~~lVR~f~lg 179 (355)
T 3amr_A 110 NGT---LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-------EGEFEQYELKADKNGYISGKKVRAFKMN 179 (355)
T ss_dssp TCC---EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-------SSEEEEEEEEECTTSCEEEEEEEEEECS
T ss_pred CCc---eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-------CCeEEEEEEEeCCCCcccceEEEEecCC
Confidence 776 5555321 1 11122345 774 5656777632 234444444 22343221 2333221
Q ss_pred CCCcccCCcCceECcCCcEEEEEeCCCCeeeEEEEecc
Q 008927 296 DPTIVESPTEPKWSSKGELFFVTDRKNGFWNLHKWIES 333 (548)
Q Consensus 296 ~~~~~~~~~~~~wspDG~L~~~sd~~~g~~~Ly~~d~~ 333 (548)
.........+....+|+.+. . ..||+++.+
T Consensus 180 -----sq~EgcvvDd~~g~Lyv~eE-d--~GIw~~da~ 209 (355)
T 3amr_A 180 -----SQTEGMAADDEYGRLYIAEE-D--EAIWKFSAE 209 (355)
T ss_dssp -----SCEEEEEEETTTTEEEEEET-T--TEEEEEECS
T ss_pred -----CCcceEEEcCCCCeEEEecc-c--ceEEEEeCC
Confidence 22334555555445566655 2 248899854
No 495
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.12 E-value=13 Score=40.34 Aligned_cols=240 Identities=7% Similarity=-0.050 Sum_probs=0.0
Q ss_pred CeEEEEeCCCCCCCceecC-C-----CCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEEECCCCCccCcEE
Q 008927 165 QRLYKHSIDSKDSSPLPIT-P-----DYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAIALNGQNIQEPKV 238 (548)
Q Consensus 165 ~~Ly~~~~~~~~~~~~~lT-~-----~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~idl~~g~~~~~~~ 238 (548)
..+|++++.. .+-+.+. + ... +...++...++.+|+.+++--.+.... ..+++|++|+.+.+ -+.
T Consensus 412 ~~v~~yd~~~--~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~~~~lyv~GG~~~~~~---~~~dv~~yd~~t~~---W~~ 482 (695)
T 2zwa_A 412 NEILQLSIHY--DKIDMKNIEVSSSEVPV-ARMCHTFTTISRNNQLLLIGGRKAPHQ---GLSDNWIFDMKTRE---WSM 482 (695)
T ss_dssp CCEEEEEECS--SCEEEEECCCCCSCCCC-CCBSCEEEEETTTTEEEEECCBSSTTC---BCCCCEEEETTTTE---EEE
T ss_pred CcEEEEECCC--CeEEEeccCCCCCCCCc-cccceEEEEEccCCEEEEEcCCCCCCC---ccccEEEEeCCCCc---EEE
Q ss_pred eeecCCc-eeeeEEC-CCCCEEEEEEecCCCCCCCCceEEEEEecCCCceeeeEE---EcCCCCCcccCCcCceECcC-C
Q 008927 239 LVSGSDF-YAFPRMD-PRGERMAWIEWHHPNMPWDKAELWVGYISENGDVYKRVC---VAGFDPTIVESPTEPKWSSK-G 312 (548)
Q Consensus 239 L~~~~~~-~~~p~~S-PDGk~La~~~~~~~~~p~~~~~L~v~~~~~~g~~~~~~~---l~~~~~~~~~~~~~~~wspD-G 312 (548)
+...+.. ..+.... .+|+-++|-..+... .++++|.. ...+..... ..... .......+..+ +
T Consensus 483 ~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~-t~~W~~~~~~g~~p~~r----~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 483 IKSLSHTRFRHSACSLPDGNVLILGGVTEGP------AMLLYNVT-EEIFKDVTPKDEFFQNS----LVSAGLEFDPVSK 551 (695)
T ss_dssp CCCCSBCCBSCEEEECTTSCEEEECCBCSSC------SEEEEETT-TTEEEECCCSSGGGGSC----CBSCEEEEETTTT
T ss_pred CCCCCCCcccceEEEEcCCEEEEECCCCCCC------CEEEEECC-CCceEEccCCCCCCCcc----cceeEEEEeCCCC
Q ss_pred cEEEEEeCCCCe----eeEEEEeccCCe------eEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCCeEE
Q 008927 313 ELFFVTDRKNGF----WNLHKWIESNNE------VLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNGRSY 382 (548)
Q Consensus 313 ~L~~~sd~~~g~----~~Ly~~d~~~g~------~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g~~~ 382 (548)
+||++.-...+. ..++.+|+.+++ .+.+... |............ +++.||+..-.++...
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~------p~~~R~~~~~~~~----~~~~iyv~GG~~~~~~ 621 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH------PLFQRYGSQIKYI----TPRKLLIVGGTSPSGL 621 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC------GGGCCBSCEEEEE----ETTEEEEECCBCSSCC
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC------CCCCcccceEEEe----CCCEEEEECCccCCCC
Q ss_pred ------EEEEECCCCceEeecCCCce----------eEeeeecCCEEEEEEecCCC------CCeEEEEEcCCC
Q 008927 383 ------LGILDDFGHSLSLLDIPFTD----------IDNITLGNDCLFVEGASGVE------PSSVAKVTLDDH 434 (548)
Q Consensus 383 ------L~~~dl~~g~~~~l~~~~~~----------~~~~s~d~~~l~~~~ss~~~------p~~l~~~d~~~~ 434 (548)
++++|+++++++.+..+... ...+..+++.|++++...+. ...+|.+|+..+
T Consensus 622 ~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~~ 695 (695)
T 2zwa_A 622 FDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIAK 695 (695)
T ss_dssp CCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECCC
T ss_pred CCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEcC
No 496
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=86.97 E-value=20 Score=33.66 Aligned_cols=211 Identities=9% Similarity=-0.050 Sum_probs=104.2
Q ss_pred EECCEEEEEeCC-----CCeEEEEeCCCCCCC---ceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEE
Q 008927 152 IFGDTVIFSNYK-----DQRLYKHSIDSKDSS---PLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEI 223 (548)
Q Consensus 152 ~~~~~i~F~~~~-----~~~Ly~~~~~~~~~~---~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l 223 (548)
..++.|+..-.. ...+|++++.. .+ -+.+.+.. ..|.......-++ .|+.+ ..... ....+++
T Consensus 60 ~~~~~l~v~GG~~~~~~~~~~~~~d~~~--~~~~~W~~~~~~p---~~r~~~~~~~~~~-~lyv~-GG~~~--~~~~~~~ 130 (301)
T 2vpj_A 60 SLHDRIYVIGGYDGRSRLSSVECLDYTA--DEDGVWYSVAPMN---VRRGLAGATTLGD-MIYVS-GGFDG--SRRHTSM 130 (301)
T ss_dssp EETTEEEEECCBCSSCBCCCEEEEETTC--CTTCCCEEECCCS---SCCBSCEEEEETT-EEEEE-CCBCS--SCBCCEE
T ss_pred EECCEEEEEcCCCCCccCceEEEEECCC--CCCCeeEECCCCC---CCccceeEEEECC-EEEEE-cccCC--CcccceE
Confidence 345555554321 14799999987 55 66776542 1222221222244 44333 22111 1235689
Q ss_pred EEEECCCCCccCcEEeeecCCc-eeeeEECCCCCEEEEEE-ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCccc
Q 008927 224 VAIALNGQNIQEPKVLVSGSDF-YAFPRMDPRGERMAWIE-WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVE 301 (548)
Q Consensus 224 ~~idl~~g~~~~~~~L~~~~~~-~~~p~~SPDGk~La~~~-~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~ 301 (548)
+++|+.+.+ -+.+...+.. .......-+++ |..+. .+... ....++++|+.. +++ ..+...+ . .
T Consensus 131 ~~~d~~~~~---W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~---~~~~~~~~d~~~-~~W---~~~~~~p-~--~ 196 (301)
T 2vpj_A 131 ERYDPNIDQ---WSMLGDMQTAREGAGLVVASGV-IYCLGGYDGLN---ILNSVEKYDPHT-GHW---TNVTPMA-T--K 196 (301)
T ss_dssp EEEETTTTE---EEEEEECSSCCBSCEEEEETTE-EEEECCBCSSC---BCCCEEEEETTT-TEE---EEECCCS-S--C
T ss_pred EEEcCCCCe---EEECCCCCCCcccceEEEECCE-EEEECCCCCCc---ccceEEEEeCCC-CcE---EeCCCCC-c--c
Confidence 999999887 5555432211 11111222554 44332 11111 245799999874 544 3333222 0 1
Q ss_pred CCcCceECcCCcEEEEEeCC-CC-eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC
Q 008927 302 SPTEPKWSSKGELFFVTDRK-NG-FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG 379 (548)
Q Consensus 302 ~~~~~~wspDG~L~~~sd~~-~g-~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g 379 (548)
........-+++||++.-.. .+ ...++.+|+++++.+.+.+.. .+... ..... -++.|++..-.++
T Consensus 197 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p----~~r~~---~~~~~-----~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 197 RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT----TPRCY---VGATV-----LRGRLYAIAGYDG 264 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS----SCCBS---CEEEE-----ETTEEEEECCBCS
T ss_pred cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC----Ccccc---eeEEE-----ECCEEEEEcCcCC
Confidence 11111223366777774221 22 457999999999888775321 11111 01122 2345554422111
Q ss_pred ---eEEEEEEECCCCceEeec
Q 008927 380 ---RSYLGILDDFGHSLSLLD 397 (548)
Q Consensus 380 ---~~~L~~~dl~~g~~~~l~ 397 (548)
...++++|+++++++.+.
T Consensus 265 ~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 265 NSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp SSBEEEEEEEETTTTEEEEEE
T ss_pred CcccccEEEEcCCCCeEEEcC
Confidence 367899999988887764
No 497
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=86.89 E-value=0.74 Score=44.71 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=43.6
Q ss_pred eEEEeeccCCCeEEEEEEEcCCCCCCCC---CCCCCCcEEEEEccCccccccCccC-hHHHHHHhcCcEEEEeC
Q 008927 462 ELIEFPTEVPGQKAYAYYYPPSNPIYQA---SPEEKPPLLVKSHGGPTSEARGILN-LSIQYWTSRGWAFVDVN 531 (548)
Q Consensus 462 e~i~~~s~~dG~~i~g~l~~P~~~~~~~---~~~~~~Pliv~iHGGP~~~~~~~~~-~~~Q~~asrGyaVl~~N 531 (548)
..+++.|..-|.+..-.+|.|.+ |+. ++++++|+|.+.||..-....+.-. -..++.+..|.+|+.++
T Consensus 15 ~~~~~~S~~l~~~~~~~VyLPp~--y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~ 86 (299)
T 4fol_A 15 IKLSHNSNSTKTSMNVNIYLPKH--YYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPD 86 (299)
T ss_dssp EEEEEECTTTSSEEEEEEEECGG--GGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEEC
T ss_pred EEEEEECcccCCceEEEEEcCCC--CCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccC
Confidence 45677765367888999999954 532 2467899999999986443322111 12355667899999986
No 498
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.13 E-value=23 Score=33.38 Aligned_cols=213 Identities=6% Similarity=-0.123 Sum_probs=103.7
Q ss_pred EECCEEEEEeCC-----CCeEEEEeCCCCCCCceecCCCCCCCCceecceeeCCCCCEEEEEEeccCCCCCCceeEEEEE
Q 008927 152 IFGDTVIFSNYK-----DQRLYKHSIDSKDSSPLPITPDYGEPLVSYADGIFDPRFNRYVTVREDRRQDALNSTTEIVAI 226 (548)
Q Consensus 152 ~~~~~i~F~~~~-----~~~Ly~~~~~~~~~~~~~lT~~~~~~~~~~~~~~~SpDG~~i~~v~~~~~~~~~~~~~~l~~i 226 (548)
..++.|+..-.. ...+|++|+.. .+-+.+.+.. ..|...-...-+++ |+.+-.... ....++++++
T Consensus 59 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~p---~~r~~~~~~~~~~~-iyv~GG~~~---~~~~~~~~~~ 129 (302)
T 2xn4_A 59 YMAGLVFAVGGFNGSLRVRTVDSYDPVK--DQWTSVANMR---DRRSTLGAAVLNGL-LYAVGGFDG---STGLSSVEAY 129 (302)
T ss_dssp EETTEEEEESCBCSSSBCCCEEEEETTT--TEEEEECCCS---SCCBSCEEEEETTE-EEEEEEECS---SCEEEEEEEE
T ss_pred EECCEEEEEeCcCCCccccceEEECCCC--CceeeCCCCC---ccccceEEEEECCE-EEEEcCCCC---CccCceEEEE
Confidence 345565554321 14799999986 5566666542 12222111222444 433322111 1245789999
Q ss_pred ECCCCCccCcEEeeecCCc-eeeeEECCCCCEEEEEE-ecCCCCCCCCceEEEEEecCCCceeeeEEEcCCCCCcccCCc
Q 008927 227 ALNGQNIQEPKVLVSGSDF-YAFPRMDPRGERMAWIE-WHHPNMPWDKAELWVGYISENGDVYKRVCVAGFDPTIVESPT 304 (548)
Q Consensus 227 dl~~g~~~~~~~L~~~~~~-~~~p~~SPDGk~La~~~-~~~~~~p~~~~~L~v~~~~~~g~~~~~~~l~~~~~~~~~~~~ 304 (548)
|+.+.+ -+.+...+.. .......-+++ |..+. .+... .-....++++|+.. +++ ..+...+.. ....
T Consensus 130 d~~~~~---W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~-~~~~~~~~~yd~~~-~~W---~~~~~~p~~--r~~~ 198 (302)
T 2xn4_A 130 NIKSNE---WFHVAPMNTRRSSVGVGVVGGL-LYAVGGYDVAS-RQCLSTVECYNATT-NEW---TYIAEMSTR--RSGA 198 (302)
T ss_dssp ETTTTE---EEEECCCSSCCBSCEEEEETTE-EEEECCEETTT-TEECCCEEEEETTT-TEE---EEECCCSSC--CBSC
T ss_pred eCCCCe---EeecCCCCCcccCceEEEECCE-EEEEeCCCCCC-CccccEEEEEeCCC-CcE---EECCCCccc--cccc
Confidence 999887 5555432211 11111122454 43332 11110 00135689999874 444 233322201 1111
Q ss_pred CceECcCCcEEEEEeCC-CC-eeeEEEEeccCCeeEeecccccccCCCcccccCcceeeeeecCCCCEEEEEEEeCC---
Q 008927 305 EPKWSSKGELFFVTDRK-NG-FWNLHKWIESNNEVLAIYSLDAEFSRPLWVFGINSYEIIQSHGEKNLIACSYRQNG--- 379 (548)
Q Consensus 305 ~~~wspDG~L~~~sd~~-~g-~~~Ly~~d~~~g~~~~l~~~~~d~~~p~w~~~~~~~~~~~~~~d~~~l~~~~~~~g--- 379 (548)
....-+++||++.-.. .. ...++.+|+++++.+.+.+.. .+... ..... -++.||+..-.++
T Consensus 199 -~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~----~~r~~---~~~~~-----~~~~i~v~GG~~~~~~ 265 (302)
T 2xn4_A 199 -GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN----MCRRN---AGVCA-----VNGLLYVVGGDDGSCN 265 (302)
T ss_dssp -EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS----SCCBS---CEEEE-----ETTEEEEECCBCSSSB
T ss_pred -cEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC----Ccccc---CeEEE-----ECCEEEEECCcCCCcc
Confidence 1223367777774221 11 346999999999888775321 11110 11122 2445655432221
Q ss_pred eEEEEEEECCCCceEeec
Q 008927 380 RSYLGILDDFGHSLSLLD 397 (548)
Q Consensus 380 ~~~L~~~dl~~g~~~~l~ 397 (548)
...++++|+++++++.+.
T Consensus 266 ~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 266 LASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp CCCEEEEETTTTEEEECS
T ss_pred cccEEEEcCCCCeEEECC
Confidence 346889999998888775
No 499
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.81 E-value=2.6 Score=44.88 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=47.5
Q ss_pred ceeeCCCCCEEEEEEeccCCCC-----CCceeEEEEEECCCCCccCcEEeeecCC--ceeeeEECCCCCEEEEEEecCCC
Q 008927 195 DGIFDPRFNRYVTVREDRRQDA-----LNSTTEIVAIALNGQNIQEPKVLVSGSD--FYAFPRMDPRGERMAWIEWHHPN 267 (548)
Q Consensus 195 ~~~~SpDG~~i~~v~~~~~~~~-----~~~~~~l~~idl~~g~~~~~~~L~~~~~--~~~~p~~SPDGk~La~~~~~~~~ 267 (548)
++.++|+|. +++++|..... ....+.++.++..+|+ .+++..++. -...|.|||||++| |+.-.||+
T Consensus 480 NL~fd~~G~--LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~---~~rf~~~P~gaE~TG~~fspDg~tl-fvniQHPG 553 (592)
T 3zwu_A 480 GLGFDKAGR--LWILTDGDSSNAGDFAGMGNNQMLCADPATGE---IRRFMVGPIGCEVTGISFSPDQKTL-FVGIQHPG 553 (592)
T ss_dssp EEEECTTCC--EEEEECCCCCCSGGGTTTCSCEEEEECTTTCC---EEEEEECCTTCEEEEEEECTTSSEE-EEEEESTT
T ss_pred ceEECCCCC--EEEEecCCCcccccccccccceEEEEeCCCCe---EEEEEeCCCCccCcCeeECCCCCEE-EEEEECCC
Confidence 467999997 45557753210 1135789999999998 777765543 26789999999987 56667874
No 500
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=85.42 E-value=0.73 Score=43.34 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=28.8
Q ss_pred CcEEEEEccCccccccCccChHHHHHHhcCcEEEEeCCCC
Q 008927 495 PPLLVKSHGGPTSEARGILNLSIQYWTSRGWAFVDVNYGG 534 (548)
Q Consensus 495 ~Pliv~iHGGP~~~~~~~~~~~~Q~~asrGyaVl~~NyRG 534 (548)
-|.||++||.+.... .|...++.|+ ++|.|+.+|+||
T Consensus 15 ~~~vvllHG~~~~~~--~w~~~~~~L~-~~~~vi~~Dl~G 51 (268)
T 3v48_A 15 APVVVLISGLGGSGS--YWLPQLAVLE-QEYQVVCYDQRG 51 (268)
T ss_dssp CCEEEEECCTTCCGG--GGHHHHHHHH-TTSEEEECCCTT
T ss_pred CCEEEEeCCCCccHH--HHHHHHHHHh-hcCeEEEECCCC
Confidence 478999999876543 4566667775 579999999998
Done!