Query 008931
Match_columns 548
No_of_seqs 238 out of 1439
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 18:20:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008931.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008931hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06914 GT8_GNT1 GNT1 is a fun 100.0 4.7E-40 1E-44 334.5 19.4 256 31-300 1-274 (278)
2 PLN00176 galactinol synthase 100.0 2.8E-39 6.1E-44 335.7 22.8 229 26-278 18-294 (333)
3 cd02537 GT8_Glycogenin Glycoge 100.0 2.4E-37 5.3E-42 308.0 20.4 212 31-263 1-218 (240)
4 cd00505 Glyco_transf_8 Members 100.0 4E-32 8.7E-37 270.4 16.8 206 32-259 2-246 (246)
5 PRK15171 lipopolysaccharide 1, 100.0 2.1E-30 4.6E-35 270.5 16.6 222 31-278 25-289 (334)
6 PF01501 Glyco_transf_8: Glyco 100.0 7.9E-31 1.7E-35 255.1 12.0 205 34-261 2-250 (250)
7 cd04194 GT8_A4GalT_like A4GalT 100.0 1.4E-30 3E-35 258.7 12.5 201 34-258 3-247 (248)
8 cd06431 GT8_LARGE_C LARGE cata 100.0 2.2E-28 4.7E-33 249.8 17.3 204 38-262 8-256 (280)
9 cd06429 GT8_like_1 GT8_like_1 100.0 4.5E-28 9.7E-33 244.8 15.3 210 35-274 4-255 (257)
10 COG1442 RfaJ Lipopolysaccharid 99.9 2.7E-27 5.8E-32 245.6 16.6 206 34-264 5-251 (325)
11 cd06430 GT8_like_2 GT8_like_2 99.9 2.6E-25 5.6E-30 228.7 20.3 237 34-304 3-294 (304)
12 cd06432 GT8_HUGT1_C_like The C 99.9 1.9E-23 4.2E-28 210.0 14.3 191 35-253 5-241 (248)
13 PLN02523 galacturonosyltransfe 99.9 4.9E-22 1.1E-26 215.2 15.4 214 37-277 253-547 (559)
14 PLN02718 Probable galacturonos 99.9 7.4E-22 1.6E-26 215.9 10.8 211 37-274 318-588 (603)
15 PLN02867 Probable galacturonos 99.8 4.3E-21 9.3E-26 207.9 9.7 145 104-273 331-519 (535)
16 PLN02769 Probable galacturonos 99.8 4.3E-20 9.3E-25 203.0 11.7 215 36-277 334-618 (629)
17 PLN02659 Probable galacturonos 99.8 1.8E-20 3.9E-25 202.5 7.3 149 104-278 330-522 (534)
18 PLN02870 Probable galacturonos 99.8 7E-20 1.5E-24 197.9 6.1 150 104-279 329-522 (533)
19 PLN02742 Probable galacturonos 99.8 1.2E-18 2.5E-23 188.9 13.3 216 36-278 231-524 (534)
20 PLN02829 Probable galacturonos 99.8 5.9E-19 1.3E-23 193.2 10.0 148 104-277 443-627 (639)
21 PLN02910 polygalacturonate 4-a 99.8 1.9E-18 4.1E-23 189.0 10.6 147 104-276 461-644 (657)
22 COG5597 Alpha-N-acetylglucosam 99.7 2.7E-17 5.8E-22 166.8 2.7 207 28-264 68-343 (368)
23 KOG1950 Glycosyl transferase, 98.2 6.1E-07 1.3E-11 95.6 3.4 91 104-194 151-242 (369)
24 PF11051 Mannosyl_trans3: Mann 97.9 4.4E-05 9.6E-10 78.2 9.9 114 36-159 6-124 (271)
25 PF03407 Nucleotid_trans: Nucl 97.8 0.00016 3.4E-09 70.5 10.7 165 70-250 11-200 (212)
26 KOG1879 UDP-glucose:glycoprote 96.5 0.012 2.6E-07 70.4 10.0 195 32-259 1183-1425(1470)
27 PLN03182 xyloglucan 6-xylosylt 91.1 0.66 1.4E-05 50.5 7.6 76 115-193 196-306 (429)
28 PF05637 Glyco_transf_34: gala 89.6 0.17 3.7E-06 51.2 1.7 91 104-195 59-194 (239)
29 KOG1928 Alpha-1,4-N-acetylgluc 89.3 0.36 7.8E-06 52.0 3.8 75 121-195 242-319 (409)
30 cd02515 Glyco_transf_6 Glycosy 87.1 3 6.6E-05 43.2 8.7 169 30-228 35-247 (271)
31 TIGR03111 glyc2_xrt_Gpos1 puta 84.1 5.7 0.00012 43.4 9.7 119 3-131 22-146 (439)
32 PRK11204 N-glycosyltransferase 82.5 7 0.00015 41.9 9.5 95 29-132 54-150 (420)
33 PLN03181 glycosyltransferase; 82.1 5.2 0.00011 44.0 8.1 86 105-193 182-307 (453)
34 cd06439 CESA_like_1 CESA_like_ 80.1 8.9 0.00019 37.4 8.5 95 28-132 28-125 (251)
35 cd02525 Succinoglycan_BP_ExoA 77.6 9.8 0.00021 36.5 7.9 93 31-131 2-96 (249)
36 TIGR03469 HonB hopene-associat 75.0 22 0.00047 38.1 10.4 100 28-131 39-148 (384)
37 cd04186 GT_2_like_c Subfamily 74.7 24 0.00052 31.2 9.1 82 43-132 9-90 (166)
38 cd06421 CESA_CelA_like CESA_Ce 72.8 27 0.00058 33.3 9.5 96 30-131 2-99 (234)
39 PF07801 DUF1647: Protein of u 72.6 21 0.00045 33.8 8.3 58 30-89 61-120 (142)
40 TIGR03472 HpnI hopanoid biosyn 72.3 35 0.00076 36.3 11.1 95 29-131 41-141 (373)
41 PF00535 Glycos_transf_2: Glyc 70.1 11 0.00023 33.1 5.7 94 34-139 3-102 (169)
42 cd00761 Glyco_tranf_GTA_type G 69.1 20 0.00044 30.4 7.0 88 43-135 9-96 (156)
43 PF03414 Glyco_transf_6: Glyco 68.5 18 0.00039 38.8 7.7 170 30-229 100-313 (337)
44 PRK14583 hmsR N-glycosyltransf 65.6 23 0.00049 38.8 8.1 96 29-132 75-171 (444)
45 cd04185 GT_2_like_b Subfamily 65.3 31 0.00066 32.4 8.0 85 44-132 10-95 (202)
46 cd06423 CESA_like CESA_like is 63.6 30 0.00066 30.1 7.2 83 44-132 10-94 (180)
47 cd04192 GT_2_like_e Subfamily 60.2 34 0.00074 32.3 7.4 85 44-131 10-97 (229)
48 cd04195 GT2_AmsE_like GT2_AmsE 55.7 66 0.0014 29.9 8.4 89 38-132 7-96 (201)
49 PF04488 Gly_transf_sug: Glyco 54.9 6.5 0.00014 34.2 1.3 87 47-138 5-98 (103)
50 cd06434 GT2_HAS Hyaluronan syn 53.0 89 0.0019 29.8 9.0 91 32-132 3-93 (235)
51 cd06427 CESA_like_2 CESA_like_ 51.9 88 0.0019 30.5 8.9 95 31-132 3-100 (241)
52 cd06420 GT2_Chondriotin_Pol_N 51.3 55 0.0012 29.9 7.0 90 35-132 3-95 (182)
53 cd06433 GT_2_WfgS_like WfgS an 50.8 80 0.0017 28.8 8.0 85 44-137 11-97 (202)
54 PRK10063 putative glycosyl tra 49.5 73 0.0016 32.0 8.1 94 30-133 2-99 (248)
55 PRK11498 bcsA cellulose syntha 49.5 89 0.0019 37.7 9.9 95 29-133 260-356 (852)
56 cd04196 GT_2_like_d Subfamily 49.1 73 0.0016 29.6 7.6 97 34-138 3-102 (214)
57 COG2247 LytB Putative cell wal 48.2 1.2E+02 0.0026 32.6 9.4 84 1-88 1-106 (337)
58 cd04184 GT2_RfbC_Mx_like Myxoc 47.7 81 0.0018 29.3 7.6 96 31-132 3-99 (202)
59 PRK15382 non-LEE encoded effec 46.9 13 0.00028 38.3 2.1 47 117-163 211-260 (326)
60 PRK15384 type III secretion sy 46.4 13 0.00028 38.3 2.0 47 117-163 216-265 (336)
61 PRK15383 type III secretion sy 46.3 13 0.00028 38.3 2.0 47 117-163 219-268 (335)
62 COG0463 WcaA Glycosyltransfera 45.6 1.1E+02 0.0023 26.5 7.5 93 30-132 4-98 (291)
63 PRK05454 glucosyltransferase M 44.3 1.2E+02 0.0027 35.6 9.9 101 26-132 121-236 (691)
64 PRK10073 putative glycosyl tra 43.9 86 0.0019 33.0 7.9 94 30-132 7-101 (328)
65 cd02520 Glucosylceramide_synth 43.4 62 0.0013 30.5 6.2 95 31-130 3-100 (196)
66 PF03314 DUF273: Protein of un 42.8 44 0.00096 33.8 5.1 86 114-205 39-134 (222)
67 cd02510 pp-GalNAc-T pp-GalNAc- 42.5 1.1E+02 0.0023 31.2 8.1 84 43-131 11-98 (299)
68 cd06438 EpsO_like EpsO protein 40.3 1.2E+02 0.0027 28.1 7.6 88 37-131 5-96 (183)
69 cd06437 CESA_CaSu_A2 Cellulose 38.8 1.8E+02 0.0039 27.9 8.8 93 31-132 3-103 (232)
70 cd02511 Beta4Glucosyltransfera 36.0 2E+02 0.0043 28.0 8.6 85 32-132 3-87 (229)
71 cd04179 DPM_DPG-synthase_like 35.6 72 0.0016 29.1 5.2 90 44-138 10-102 (185)
72 cd02514 GT13_GLCNAC-TI GT13_GL 34.9 2.1E+02 0.0046 30.7 9.1 104 33-138 4-119 (334)
73 PF13704 Glyco_tranf_2_4: Glyc 32.2 95 0.0021 26.0 4.9 69 60-133 19-88 (97)
74 PF03071 GNT-I: GNT-I family; 32.1 1.8E+02 0.0038 32.6 8.1 106 30-139 94-214 (434)
75 cd06913 beta3GnTL1_like Beta 1 31.7 3E+02 0.0065 26.1 9.0 87 44-132 10-100 (219)
76 PF10111 Glyco_tranf_2_2: Glyc 31.1 1.4E+02 0.003 30.4 6.9 87 44-132 17-104 (281)
77 cd06436 GlcNAc-1-P_transferase 30.6 1.6E+02 0.0035 27.7 6.8 35 44-79 10-44 (191)
78 TIGR00846 caca2 calcium/proton 30.0 3.3E+02 0.0072 29.4 9.7 111 416-535 172-286 (365)
79 PLN02726 dolichyl-phosphate be 28.1 1.9E+02 0.004 28.4 7.0 93 29-129 9-106 (243)
80 PF04765 DUF616: Protein of un 27.6 75 0.0016 33.8 4.2 35 104-138 139-174 (305)
81 cd06442 DPM1_like DPM1_like re 27.4 1.4E+02 0.003 28.2 5.8 81 45-131 11-93 (224)
82 TIGR00378 cax calcium/proton e 26.2 3.4E+02 0.0074 29.0 9.0 114 415-536 154-271 (349)
83 cd02522 GT_2_like_a GT_2_like_ 25.8 2.8E+02 0.006 26.1 7.5 74 45-131 13-87 (221)
84 cd06435 CESA_NdvC_like NdvC_li 25.8 5.4E+02 0.012 24.5 9.6 16 116-131 84-99 (236)
85 COG4736 CcoQ Cbb3-type cytochr 24.6 99 0.0021 25.2 3.4 33 414-446 11-43 (60)
86 COG1215 Glycosyltransferases, 24.1 6.2E+02 0.013 26.8 10.5 98 29-132 54-153 (439)
87 PRK10714 undecaprenyl phosphat 23.6 5.6E+02 0.012 26.9 9.9 98 29-137 6-109 (325)
88 PF12805 FUSC-like: FUSC-like 22.8 6.3E+02 0.014 25.9 9.9 20 497-516 70-89 (284)
89 PF05045 RgpF: Rhamnan synthes 22.8 2E+02 0.0043 32.5 6.6 104 63-172 2-130 (498)
90 TIGR03030 CelA cellulose synth 22.3 4.7E+02 0.01 30.8 9.9 19 114-132 226-244 (713)
91 PRK13915 putative glucosyl-3-p 21.6 4.1E+02 0.0088 27.8 8.3 95 28-128 30-127 (306)
92 cd04187 DPM1_like_bac Bacteria 20.2 3.6E+02 0.0078 24.6 6.9 23 116-138 80-103 (181)
No 1
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=4.7e-40 Score=334.45 Aligned_cols=256 Identities=24% Similarity=0.331 Sum_probs=187.1
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHH-------HHHcCCEEEEeeeecCCCCCCCccch
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKL-------LKADGWIVEKISLLENPNQVRPKRFW 103 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~-------Lk~~g~~v~~I~~I~~p~~~~~~r~~ 103 (548)
+||||++||++|+++++++++||++++|++|+|+++++++++...+. +.+.++.++.++.+..+. ...+|.
T Consensus 1 fAYvtl~Tn~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~--~~~~~~ 78 (278)
T cd06914 1 YAYVNYATNADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG--GDAYWA 78 (278)
T ss_pred CeEEEEecChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC--CCccHH
Confidence 69999999999999999999999999999999999999988754332 233466666666544433 234566
Q ss_pred hhhhhhhcccccCccEEEEEcCcccccCCchHhhcch-hh-hcccCCCCcccceEEEEeCCHHHHHHHHHHHHhcC--CC
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCR-KF-CANLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLG--SY 179 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp-~~-~Aav~~~~yFNSGVMLInps~~~f~~Ile~l~~~~--~~ 179 (548)
.+|+||.+|++++||||||||+|++|++||||||++| .. .|+.....|||||||||||+.++++++++++.+.. +.
T Consensus 79 ~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~ 158 (278)
T cd06914 79 KSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWKFASHLMVIKPSKEAFKELMTEILPAYLNKK 158 (278)
T ss_pred HHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcceecceeEEEeCCHHHHHHHHHHHHHhcccCC
Confidence 7899999999999999999999999999999999998 22 23333335999999999999999999999998753 33
Q ss_pred CCChHHHHHHHhcCCCC----CcccCCCCccccccCCCCCCcccccccccccccccccccccccCC--CCcEEEEeeCCC
Q 008931 180 TGGDQGFLNSYYSDFPN----AHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDE--SELHVIHYTLGP 253 (548)
Q Consensus 180 ~~~DQDiLN~~f~d~~~----~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~~w~~~~--~~~~IIHFt~Gp 253 (548)
.++|||+||.+|.++.+ ..+++||+.+++++..-- +-..-...+|.+ ...++|+++. +++++||||++|
T Consensus 159 ~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r-~~~~~~~l~~~~----~~~~~w~~~~~~~~~k~vHFSd~P 233 (278)
T cd06914 159 NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFR-EKLHKSFLSNAQ----HLYEKWDPDDVFKESKVIHFSDSP 233 (278)
T ss_pred CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhc-ccCHHHhhcccc----ccccccCHHHHHhhCeEEEecCCC
Confidence 67899999999999721 125677766665542000 000001111211 1235677644 899999999999
Q ss_pred C-CCCCCCccCCCCchhHHHHHHHHhhhcCCCCCCCCCCcchHHHHHH
Q 008931 254 L-KPWDWWTSWLLKPVDVWQDIRVKLEESLPGTGGGTNPKDEFAVKVL 300 (548)
Q Consensus 254 ~-KPW~~w~~~~~~~~~lW~~ir~~lee~~pg~~gg~~~~~~~i~k~l 300 (548)
. |||..++. +.+.+..+.+.. .++..++.+|+++.+|+-+
T Consensus 234 l~KPW~~~~~------~~~~~~~~~~~~-~~~~~~~~~c~~~~iW~~~ 274 (278)
T cd06914 234 LPKPWNYNNL------EDIYCIEKIYCK-MVKPRLEDDCRACDLWNSL 274 (278)
T ss_pred CCCCcCCcCH------HHHHHhCCcccc-CCCCCccCcchHHHHHHHH
Confidence 7 99999976 344444444321 2345667899999999865
No 2
>PLN00176 galactinol synthase
Probab=100.00 E-value=2.8e-39 Score=335.69 Aligned_cols=229 Identities=27% Similarity=0.456 Sum_probs=184.3
Q ss_pred CCCCCeEEEEEE-eCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCC---CCcc
Q 008931 26 SQSTDQAYVTLL-YGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQV---RPKR 101 (548)
Q Consensus 26 ~~~sr~AyVtl~-tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~---~~~r 101 (548)
.+++++||||++ +|++|++++.++++||+++++++++|++++++++++.++.|++.|.++++|+.+.++... ...+
T Consensus 18 ~~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~ 97 (333)
T PLN00176 18 AKPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAY 97 (333)
T ss_pred cccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccch
Confidence 347799999976 578999999999999999999999999999999999999999999999888887654322 1234
Q ss_pred chhhhhhhhcccccCccEEEEEcCcccccCCchHhhcchh--hhcc--------------------------cC------
Q 008931 102 FWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRK--FCAN--------------------------LK------ 147 (548)
Q Consensus 102 ~~~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp~--~~Aa--------------------------v~------ 147 (548)
+..+|+||++|++++||||||||+|++|++||||||+++. ++|. ++
T Consensus 98 ~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g 177 (333)
T PLN00176 98 YVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELG 177 (333)
T ss_pred hhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhcc
Confidence 4578999999999999999999999999999999999863 2221 11
Q ss_pred --CCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccc
Q 008931 148 --HSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYN 225 (548)
Q Consensus 148 --~~~yFNSGVMLInps~~~f~~Ile~l~~~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN 225 (548)
.+.||||||||+||+.++++++++.+.+.....++|||+||.+|++ +|..||..||
T Consensus 178 ~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~----------------------~~~~Lp~~YN 235 (333)
T PLN00176 178 PPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRD----------------------IYKPIPPVYN 235 (333)
T ss_pred CCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcC----------------------cEEECCchhc
Confidence 1249999999999999999999998877666788999999999998 4788999999
Q ss_pred ccccccc-cccccccCCCCcEEEEeeCCCCCCCCCCccCCC-------CchhHHHHHHHHh
Q 008931 226 ADVGLYM-LANKWMVDESELHVIHYTLGPLKPWDWWTSWLL-------KPVDVWQDIRVKL 278 (548)
Q Consensus 226 ~~~~~Y~-~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~-------~~~~lW~~ir~~l 278 (548)
++..... ..+.|+ .++++||||+.++.|||+.-..... ..++.|++++..-
T Consensus 236 ~~~~~~~~~~~~~~--~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 294 (333)
T PLN00176 236 LVLAMLWRHPENVE--LDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYNDE 294 (333)
T ss_pred CchhhhhhChhhcc--cCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhccc
Confidence 9754322 223343 5799999997335799986543321 1256799988764
No 3
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=2.4e-37 Score=307.96 Aligned_cols=212 Identities=44% Similarity=0.766 Sum_probs=176.4
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCC---CCccchhhhh
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQV---RPKRFWGVYT 107 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~---~~~r~~~sy~ 107 (548)
+||||+++|++|++++.|+++||++++++.+++++++++++++.++.|++.+.++.+++.++.+... ...++..+|+
T Consensus 1 ~ay~t~~~~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 80 (240)
T cd02537 1 EAYVTLLTNDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTYT 80 (240)
T ss_pred CEEEEEecChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHhH
Confidence 5999999999999999999999999999999999999899999999999999888777777654321 1234457999
Q ss_pred hhhcccccCccEEEEEcCcccccCCchHhhcchh-hhcccC--CCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCCChH
Q 008931 108 KLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRK-FCANLK--HSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGGDQ 184 (548)
Q Consensus 108 KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp~-~~Aav~--~~~yFNSGVMLInps~~~f~~Ile~l~~~~~~~~~DQ 184 (548)
||.+|++++||||||||+|++|++|||+||+.+. ++|... ++.|||||||++||+...++++++.+.+...+.++||
T Consensus 81 kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQ 160 (240)
T cd02537 81 KLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQ 160 (240)
T ss_pred HHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCCCH
Confidence 9999999999999999999999999999999954 444322 3479999999999999999999999987666788999
Q ss_pred HHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccC
Q 008931 185 GFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSW 263 (548)
Q Consensus 185 DiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~ 263 (548)
|+||.+|+++. .+..||..||++.+.+.....+....++++||||+ |+.|||+.++..
T Consensus 161 diLN~~~~~~~--------------------~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~-g~~KPW~~~~~~ 218 (240)
T cd02537 161 GLLNSYFSDRG--------------------IWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI-GGDKPWSWWRDP 218 (240)
T ss_pred HHHHHHHcCCC--------------------CEeECCcceeeehhhhccCchhhcccCCcEEEEEe-CCCCCCCCCcCC
Confidence 99999999831 27889999999866543322222346789999997 878999977664
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.98 E-value=4e-32 Score=270.44 Aligned_cols=206 Identities=29% Similarity=0.439 Sum_probs=152.3
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcC----CEEEEeeeecCCCCC---CC-cc-
Q 008931 32 AYVTLLYGDEFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADG----WIVEKISLLENPNQV---RP-KR- 101 (548)
Q Consensus 32 AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g----~~v~~I~~I~~p~~~---~~-~r- 101 (548)
+++++++|++|++++.|+++||++|+++ ++ +.+++++++++.++.|++.. ..+.-+ .++.+... .. ..
T Consensus 2 ~i~~~a~d~~y~~~~~v~i~Sl~~~~~~-~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~ 79 (246)
T cd00505 2 AIVIVATGDEYLRGAIVLMKSVLRHRTK-PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELI-PVDILDSVDSEHLKRPI 79 (246)
T ss_pred eEEEEecCcchhHHHHHHHHHHHHhCCC-CeEEEEEEccccHHHHHHHHHHHhccCceEEEE-eccccCcchhhhhcCcc
Confidence 5788888899999999999999999876 43 34667889999999998752 222111 12221111 11 22
Q ss_pred chhhhhhhhcccccC-ccEEEEEcCcccccCCchHhhcch---hhhcccC-------------------CCCcccceEEE
Q 008931 102 FWGVYTKLKIFNMTN-YKKVVYLDADTIVIKNIEDLFKCR---KFCANLK-------------------HSERLNSGVMV 158 (548)
Q Consensus 102 ~~~sy~KL~l~~L~e-YdRVLYLDaDtLVl~dLDeLF~lp---~~~Aav~-------------------~~~yFNSGVML 158 (548)
...+|+||+++++.+ +|||||||+|+||++||+|||+++ ..+|+++ ...||||||||
T Consensus 80 ~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVml 159 (246)
T cd00505 80 KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFV 159 (246)
T ss_pred ccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeEE
Confidence 247899999999855 999999999999999999999997 2333211 13699999999
Q ss_pred EeCCHHHHHHHHHHHHh-----cCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccccccccccc
Q 008931 159 VEPSAAVFNDMMTKVNT-----LGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYML 233 (548)
Q Consensus 159 Inps~~~f~~Ile~l~~-----~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~ 233 (548)
||+++|+++++.+++.+ ..++.++|||+||.+|.+.+ .++..||.+||++...+..
T Consensus 160 inl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~-------------------~~i~~L~~~wN~~~~~~~~ 220 (246)
T cd00505 160 VNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVP-------------------FIVKSLPCIWNVRLTGCYR 220 (246)
T ss_pred EechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCC-------------------CeEEECCCeeeEEecCccc
Confidence 99999998888877643 13577899999999999842 0478899999997654322
Q ss_pred c-cccccCCCCcEEEEeeCCCCCCCCC
Q 008931 234 A-NKWMVDESELHVIHYTLGPLKPWDW 259 (548)
Q Consensus 234 ~-~~w~~~~~~~~IIHFt~Gp~KPW~~ 259 (548)
. .......++++||||+ |+.|||+.
T Consensus 221 ~~~~~~~~~~~~~iiHy~-g~~KPW~~ 246 (246)
T cd00505 221 SLNCFKAFVKNAKVIHFN-GPTKPWNK 246 (246)
T ss_pred cccchhhhcCCCEEEEeC-CCCCCCCC
Confidence 1 1112356799999996 88999973
No 5
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.97 E-value=2.1e-30 Score=270.52 Aligned_cols=222 Identities=23% Similarity=0.339 Sum_probs=159.7
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHc----CCEEEEeeeecC--CCCC-CCccc
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKAD----GWIVEKISLLEN--PNQV-RPKRF 102 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVv-Ivtd~ls~e~~~~Lk~~----g~~v~~I~~I~~--p~~~-~~~r~ 102 (548)
..=|.+++|++|++++.|++.||.+|+++.++.+ |+++++++++++.|++. +.++.. ..++. .... ...++
T Consensus 25 ~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~-~~id~~~~~~~~~~~~~ 103 (334)
T PRK15171 25 SLDIAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINI-YLINCERLKSLPSTKNW 103 (334)
T ss_pred ceeEEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEE-EEeCHHHHhCCcccCcC
Confidence 3445677899999999999999999987755543 66789999998888764 333321 12221 1111 11233
Q ss_pred -hhhhhhhhcccc-c-CccEEEEEcCcccccCCchHhhcchh----hhccc---------------C----CCCcccceE
Q 008931 103 -WGVYTKLKIFNM-T-NYKKVVYLDADTIVIKNIEDLFKCRK----FCANL---------------K----HSERLNSGV 156 (548)
Q Consensus 103 -~~sy~KL~l~~L-~-eYdRVLYLDaDtLVl~dLDeLF~lp~----~~Aav---------------~----~~~yFNSGV 156 (548)
.++|+||+++++ + ++|||||||+|+||.+||+|||+++. ++|.+ . ...||||||
T Consensus 104 s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGV 183 (334)
T PRK15171 104 TYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGF 183 (334)
T ss_pred CHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecce
Confidence 479999999997 4 69999999999999999999999962 23321 1 125999999
Q ss_pred EEEeCCHHHHHHHHHHHHhc-------CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccccccc
Q 008931 157 MVVEPSAAVFNDMMTKVNTL-------GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVG 229 (548)
Q Consensus 157 MLInps~~~f~~Ile~l~~~-------~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~ 229 (548)
||||++.|+.+++.+++.+. .++.++|||+||.+|.+ ++..||.+||++.+
T Consensus 184 lliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~----------------------~~~~L~~~wN~~~~ 241 (334)
T PRK15171 184 LLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAG----------------------KVKFIDAKYNTQFS 241 (334)
T ss_pred EEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcC----------------------CeEECCHhhCCccc
Confidence 99999999999888877541 24678999999999998 47789999998754
Q ss_pred cc-ccccc-cccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHHh
Q 008931 230 LY-MLANK-WMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKL 278 (548)
Q Consensus 230 ~Y-~~~~~-w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~l 278 (548)
.. ...+. ..+..++++||||+ |+.|||+.|+.++. .+.|+++..+-
T Consensus 242 ~~~~~~~~~~~~~~~~p~IIHy~-G~~KPW~~~~~~~~--~~~f~~~~~~s 289 (334)
T PRK15171 242 LNYELKDSVINPVNDETVFIHYI-GPTKPWHSWADYPV--SQYFLKAKEAS 289 (334)
T ss_pred hhHHHHhcccccccCCCEEEEEC-CCCCCCCCCCCCch--HHHHHHHHhcC
Confidence 31 11111 11235689999996 99999998876542 35566655553
No 6
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=7.9e-31 Score=255.10 Aligned_cols=205 Identities=27% Similarity=0.453 Sum_probs=146.6
Q ss_pred EEEEeCcchHHHHHHHHHHHHHhCCC-CCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCC---------C-CCCcc
Q 008931 34 VTLLYGDEFLLGVRVLGKSIRDTGSN-KDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPN---------Q-VRPKR 101 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL~~~~s~-~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~---------~-~~~~r 101 (548)
|++++|++|++++.|+++||++++++ .++ +++++++++++.++.|++.+..+.++..+..++ . ....+
T Consensus 2 i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T PF01501_consen 2 IVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRH 81 (250)
T ss_dssp EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTC
T ss_pred EEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccc
Confidence 57889999999999999999999875 555 457788999999999988765432222221111 1 11222
Q ss_pred c-hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhcc---------------------cCCCCcccce
Q 008931 102 F-WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCAN---------------------LKHSERLNSG 155 (548)
Q Consensus 102 ~-~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aa---------------------v~~~~yFNSG 155 (548)
+ ..+|.||+++++ ++||||||||+|++|++|+++||+++. +.++ .+...+||||
T Consensus 82 ~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsG 161 (250)
T PF01501_consen 82 FSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSG 161 (250)
T ss_dssp GGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEE
T ss_pred ccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCc
Confidence 3 478999999998 999999999999999999999999752 2221 1245899999
Q ss_pred EEEEeCCHHHHHHHHHHHHhc-----CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccccc
Q 008931 156 VMVVEPSAAVFNDMMTKVNTL-----GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGL 230 (548)
Q Consensus 156 VMLInps~~~f~~Ile~l~~~-----~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~ 230 (548)
||++|++.++++++.+++.+. ..+.++||++||.+|.+ ++..||..||+....
T Consensus 162 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~----------------------~~~~L~~~~N~~~~~ 219 (250)
T PF01501_consen 162 VMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYG----------------------NIKPLPCRYNCQPSW 219 (250)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTT----------------------GEEEEEGGGSEEHHH
T ss_pred EEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccc----------------------eeEEECchhcccccc
Confidence 999999999999888887542 24678999999999997 478899999998655
Q ss_pred cccc-cccccCCCCcEEEEeeCCCCCCCCCCc
Q 008931 231 YMLA-NKWMVDESELHVIHYTLGPLKPWDWWT 261 (548)
Q Consensus 231 Y~~~-~~w~~~~~~~~IIHFt~Gp~KPW~~w~ 261 (548)
+... .......++++||||+ |+.|||..++
T Consensus 220 ~~~~~~~~~~~~~~~~iiHy~-g~~KPW~~~~ 250 (250)
T PF01501_consen 220 YNQSDDYFNPILEDAKIIHYS-GPPKPWKSTS 250 (250)
T ss_dssp HHHTHHHHHHHGCC-SEEE---SSS-TTSTT-
T ss_pred ccccchhhHhhcCCeEEEEeC-CCCcCCCCCC
Confidence 4111 1112256899999996 8889999763
No 7
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.97 E-value=1.4e-30 Score=258.68 Aligned_cols=201 Identities=28% Similarity=0.437 Sum_probs=150.0
Q ss_pred EEEEeCcchHHHHHHHHHHHHHhCCCCCEE-EEEcCCCCHHHHHHHHHc----CCEEEEeeeecCCCCC----CCccc-h
Q 008931 34 VTLLYGDEFLLGVRVLGKSIRDTGSNKDMV-VLVSDGVSDYSKKLLKAD----GWIVEKISLLENPNQV----RPKRF-W 103 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL~~~~s~~dlV-vIvtd~ls~e~~~~Lk~~----g~~v~~I~~I~~p~~~----~~~r~-~ 103 (548)
|.+++|++|+.++.+++.||++|+++.++. ++++++++++.++.|++. +..+..+ .++.+... ...++ .
T Consensus 3 I~~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~-~i~~~~~~~~~~~~~~~~~ 81 (248)
T cd04194 3 IVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFI-KIDNDDFKFFPATTDHISY 81 (248)
T ss_pred EEEEecHhhHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEE-EcCHHHHhcCCcccccccH
Confidence 457789999999999999999998754543 355678999999999886 3333222 22222111 12233 3
Q ss_pred hhhhhhhccccc-CccEEEEEcCcccccCCchHhhcchh---hhccc------------------CCCCcccceEEEEeC
Q 008931 104 GVYTKLKIFNMT-NYKKVVYLDADTIVIKNIEDLFKCRK---FCANL------------------KHSERLNSGVMVVEP 161 (548)
Q Consensus 104 ~sy~KL~l~~L~-eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav------------------~~~~yFNSGVMLInp 161 (548)
.+|.||+++++. +||||||||+|++|++||+|||+++. ..|+. ....|||||||++|+
T Consensus 82 ~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl 161 (248)
T cd04194 82 ATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINL 161 (248)
T ss_pred HHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecchheeH
Confidence 789999999985 59999999999999999999999862 33321 124699999999999
Q ss_pred CHHHHHHHHHHHHh----c-CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccccccccccccc-
Q 008931 162 SAAVFNDMMTKVNT----L-GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLAN- 235 (548)
Q Consensus 162 s~~~f~~Ile~l~~----~-~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~- 235 (548)
+.|+.+++.+++.+ . ..+.++|||+||.+|.+ ++..||.+||++.+.+....
T Consensus 162 ~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~----------------------~~~~L~~~~N~~~~~~~~~~~ 219 (248)
T cd04194 162 KKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD----------------------KILYLPPRYNFQTGFYYLLKK 219 (248)
T ss_pred HHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC----------------------CeEEcCcccccchhHhHHhhc
Confidence 99998777766543 2 24678999999999998 37889999999876543221
Q ss_pred ------ccccCCCCcEEEEeeCCCCCCCC
Q 008931 236 ------KWMVDESELHVIHYTLGPLKPWD 258 (548)
Q Consensus 236 ------~w~~~~~~~~IIHFt~Gp~KPW~ 258 (548)
......++++||||+ |+.|||+
T Consensus 220 ~~~~~~~~~~~~~~~~iiHf~-g~~KPW~ 247 (248)
T cd04194 220 KSKEEQELEEARKNPVIIHYT-GSDKPWN 247 (248)
T ss_pred cchhHHHHHHHhcCCEEEEeC-CCCCCCC
Confidence 112356899999996 8899997
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.96 E-value=2.2e-28 Score=249.83 Aligned_cols=204 Identities=19% Similarity=0.148 Sum_probs=143.4
Q ss_pred eCcchHHHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHc----CCEEEEeee---ecCCCCCCCccch--hhhh
Q 008931 38 YGDEFLLGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKAD----GWIVEKISL---LENPNQVRPKRFW--GVYT 107 (548)
Q Consensus 38 tdd~YL~~a~VLi~SL~~~~s~~dlVv-Ivtd~ls~e~~~~Lk~~----g~~v~~I~~---I~~p~~~~~~r~~--~sy~ 107 (548)
+.++|++++.|+++||.+|+ +.++.+ +++++++++..+.|.+. +.++..+++ .+........++. .+|.
T Consensus 8 ~~~~y~~~~~~~i~Sil~n~-~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~s~~y~y~ 86 (280)
T cd06431 8 AGYNASRDVVTLVKSVLFYR-RNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKHYSGIYGLM 86 (280)
T ss_pred ccCCcHHHHHHHHHHHHHcC-CCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccchhhHHHHH
Confidence 34899999999999999996 444443 67788999998888754 333322221 0100001112332 2568
Q ss_pred hhhcccc-c-CccEEEEEcCcccccCCchHhhcc--h---h-hhccc----------------C---CCCcccceEEEEe
Q 008931 108 KLKIFNM-T-NYKKVVYLDADTIVIKNIEDLFKC--R---K-FCANL----------------K---HSERLNSGVMVVE 160 (548)
Q Consensus 108 KL~l~~L-~-eYdRVLYLDaDtLVl~dLDeLF~l--p---~-~~Aav----------------~---~~~yFNSGVMLIn 160 (548)
||+++++ + ++|||||||+|+||.+||+|||++ + . ++|++ + ...|||||||+||
T Consensus 87 RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlin 166 (280)
T cd06431 87 KLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLD 166 (280)
T ss_pred HHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeee
Confidence 9999997 4 599999999999999999999987 2 1 22211 0 0249999999999
Q ss_pred CCHHHHHHHHHHHH----hc----CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccccccc
Q 008931 161 PSAAVFNDMMTKVN----TL----GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYM 232 (548)
Q Consensus 161 ps~~~f~~Ile~l~----~~----~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~ 232 (548)
+++|+.+++.+++. +. ..+.++|||+||.++.++.+ .+..||++||++.+...
T Consensus 167 L~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~-------------------~~~~L~~~wN~~~~~~~ 227 (280)
T cd06431 167 LDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPF-------------------LVYQLPCAWNVQLSDHT 227 (280)
T ss_pred HHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcc-------------------eeEECCCccccccCccc
Confidence 99999988877764 21 34678999999999998421 25779999999865332
Q ss_pred cccccccCCCCcEEEEeeCCCCCCCCCCcc
Q 008931 233 LANKWMVDESELHVIHYTLGPLKPWDWWTS 262 (548)
Q Consensus 233 ~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~ 262 (548)
..+.-....++|+||||+ |+.|||...+.
T Consensus 228 ~~~~~~~~~~~p~IIHf~-g~~KPW~~~~~ 256 (280)
T cd06431 228 RSEQCYRDVSDLKVIHWN-SPKKLRVKNKH 256 (280)
T ss_pred hHhHhhcCcCCCEEEEeC-CCCCCCCcCCC
Confidence 222111235789999996 99999997654
No 9
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=4.5e-28 Score=244.77 Aligned_cols=210 Identities=15% Similarity=0.177 Sum_probs=149.0
Q ss_pred EEEeCcchHHHHHHHHHHHHHhCCC-CCEEE-EEcCCCCHHHHHHHHHc----CCEE--EEeeeec---CCC--C-----
Q 008931 35 TLLYGDEFLLGVRVLGKSIRDTGSN-KDMVV-LVSDGVSDYSKKLLKAD----GWIV--EKISLLE---NPN--Q----- 96 (548)
Q Consensus 35 tl~tdd~YL~~a~VLi~SL~~~~s~-~dlVv-Ivtd~ls~e~~~~Lk~~----g~~v--~~I~~I~---~p~--~----- 96 (548)
.+.+| +|+ +++|++.|+..|+++ .++++ +++|+++.+.++.+.+. +.++ ..++... ... .
T Consensus 4 v~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~ 81 (257)
T cd06429 4 VIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLE 81 (257)
T ss_pred EEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhh
Confidence 34566 999 567777788888766 66654 77899998888877664 2232 2322110 000 0
Q ss_pred ----------CCCccc-hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhcccCCCCcccceEEEEeC
Q 008931 97 ----------VRPKRF-WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANLKHSERLNSGVMVVEP 161 (548)
Q Consensus 97 ----------~~~~r~-~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav~~~~yFNSGVMLInp 161 (548)
.+++.+ ..+|.||+++++ ++++||||||+|+||.+||+|||+++. .+|++.+ |||||||+||+
T Consensus 82 ~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d--yfNsGV~linl 159 (257)
T cd06429 82 SEADTSNLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET--SWNPGVNVVNL 159 (257)
T ss_pred ccccccccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh--hcccceEEEeH
Confidence 122334 378999999997 679999999999999999999999973 5566655 99999999999
Q ss_pred CHHHHHHHHHHHHh----cC-C----CCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccccccc
Q 008931 162 SAAVFNDMMTKVNT----LG-S----YTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYM 232 (548)
Q Consensus 162 s~~~f~~Ile~l~~----~~-~----~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~ 232 (548)
++|+.+++.+++.+ .. + ...+|||+||..|.+ ++..||.+||.+.-.|.
T Consensus 160 ~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~----------------------~~~~L~~~wN~~~l~~~ 217 (257)
T cd06429 160 TEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYG----------------------LTSPLDPSWHVRGLGYN 217 (257)
T ss_pred HHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccC----------------------eeEECChHHcccCCccc
Confidence 99999888766532 11 1 356799999999998 47788999998632222
Q ss_pred cccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHH
Q 008931 233 LANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDI 274 (548)
Q Consensus 233 ~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~i 274 (548)
.... ....++++||||+ |+.|||+.++.+. .-+.|+.+
T Consensus 218 ~~~~-~~~~~~~~IIHy~-G~~KPW~~~~~~~--~~~~w~~y 255 (257)
T cd06429 218 YGIR-PQDIKAAAVLHFN-GNMKPWLRTAIPS--YKELWEKY 255 (257)
T ss_pred cccc-ccccCCcEEEEEC-CCCCCcCCCCCCh--HHHHHHHH
Confidence 2111 1245799999996 9999999886533 34667665
No 10
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=2.7e-27 Score=245.63 Aligned_cols=206 Identities=23% Similarity=0.340 Sum_probs=155.2
Q ss_pred EEEEeCcchHHHHHHHHHHHHHhCCC--CCEEEEEcCCCCHHHHHHHHHc----CCE--EEEeeeecCCCCC--CCccch
Q 008931 34 VTLLYGDEFLLGVRVLGKSIRDTGSN--KDMVVLVSDGVSDYSKKLLKAD----GWI--VEKISLLENPNQV--RPKRFW 103 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL~~~~s~--~dlVvIvtd~ls~e~~~~Lk~~----g~~--v~~I~~I~~p~~~--~~~r~~ 103 (548)
+.++.|++|+.++.|+++|+..|+.+ ..++ +..+++++|++++|++. +.. +..++ ++..... ...+|.
T Consensus 5 Iv~a~D~nY~~~~gvsI~SiL~~n~~~~~~fh-il~~~i~~e~~~~l~~~~~~f~~~i~~~~id-~~~~~~~~~~~~~~s 82 (325)
T COG1442 5 IAFAFDKNYLIPAGVSIYSLLEHNRKIFYKFH-ILVDGLNEEDKKKLNETAEPFKSFIVLEVID-IEPFLDYPPFTKRFS 82 (325)
T ss_pred EEEEcccccchhHHHHHHHHHHhCccccEEEE-EEecCCCHHHHHHHHHHHHhhccceeeEEEe-chhhhcccccccchH
Confidence 56789999999999999999999874 4444 45578999999988875 221 22221 1111111 124554
Q ss_pred -hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc-------------------CCCCcccceEEEE
Q 008931 104 -GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL-------------------KHSERLNSGVMVV 159 (548)
Q Consensus 104 -~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav-------------------~~~~yFNSGVMLI 159 (548)
.+|.|++++++ ++|||+||+|+|++|.+++++||+++. ..|++ ..+.|||||||++
T Consensus 83 ~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~lli 162 (325)
T COG1442 83 KMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGVLLI 162 (325)
T ss_pred HHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccceeee
Confidence 79999999998 789999999999999999999999973 22221 2357899999999
Q ss_pred eCCHHHHHHHHHHHHh-----cCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccccccc-c
Q 008931 160 EPSAAVFNDMMTKVNT-----LGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYM-L 233 (548)
Q Consensus 160 nps~~~f~~Ile~l~~-----~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~-~ 233 (548)
|.+.|+.+++.+++.+ ...+..+|||+||.+|++ ++..||.+||++...-. .
T Consensus 163 nl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~----------------------~~~~L~~~YN~~~~~~~~~ 220 (325)
T COG1442 163 NLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFED----------------------RVLELPIRYNAIPYIDSQL 220 (325)
T ss_pred hHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHh----------------------hhhccCcccceeehhhhcc
Confidence 9999999999888743 246788999999999999 46789999999864321 1
Q ss_pred ccc-cccCCCCcEEEEeeCCCCCCCCCCccCC
Q 008931 234 ANK-WMVDESELHVIHYTLGPLKPWDWWTSWL 264 (548)
Q Consensus 234 ~~~-w~~~~~~~~IIHFt~Gp~KPW~~w~~~~ 264 (548)
... -.+..+++.++||+ |+.|||+.|+...
T Consensus 221 ~~~~~~~~~~~~~iiHy~-g~~KPW~~~~~~~ 251 (325)
T COG1442 221 KDKYIYPFGDDPVILHYA-GPTKPWHSDSSNY 251 (325)
T ss_pred chhhhccCCCCceEEEec-CCCCCCcCccccc
Confidence 111 13466899999996 8899999887533
No 11
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.93 E-value=2.6e-25 Score=228.73 Aligned_cols=237 Identities=15% Similarity=0.171 Sum_probs=163.7
Q ss_pred EEEEeCcchHHHHHHHHHHHHHhCCCCCE--EEEEcCCCCHHHHHHHHHcC---CEE--EEeeeecCCCCCCCcc---ch
Q 008931 34 VTLLYGDEFLLGVRVLGKSIRDTGSNKDM--VVLVSDGVSDYSKKLLKADG---WIV--EKISLLENPNQVRPKR---FW 103 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL~~~~s~~dl--VvIvtd~ls~e~~~~Lk~~g---~~v--~~I~~I~~p~~~~~~r---~~ 103 (548)
++++++++++..+.++++|+..++ +.++ +++..+..+++.+++|++.. .+. ..+..|..|.....++ +.
T Consensus 3 ~~vv~~g~~~~~~~~~lkSil~~n-~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGERLEETLTMLKSAIVFS-QKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCcHHHHHHHHHHHHHhC-CCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 445555556999999999999987 4454 34444458888888888761 111 2444455554322222 22
Q ss_pred -hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcc--h--h--hhcccC---------------C----CCcccceE
Q 008931 104 -GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKC--R--K--FCANLK---------------H----SERLNSGV 156 (548)
Q Consensus 104 -~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~l--p--~--~~Aav~---------------~----~~yFNSGV 156 (548)
.+|.||+++++ +++|||||||+|++|++||+|||++ + . ++|..+ . ..+|||||
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGV 161 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGV 161 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccce
Confidence 68999999996 7799999999999999999999987 3 1 333211 1 13599999
Q ss_pred EEEeCCHHHH-----------HHHHHHH----Hhc-CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccc
Q 008931 157 MVVEPSAAVF-----------NDMMTKV----NTL-GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERL 220 (548)
Q Consensus 157 MLInps~~~f-----------~~Ile~l----~~~-~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rL 220 (548)
|+||+++|+. .++.+++ ++. .++.++|||+||.+|.++++ .+..|
T Consensus 162 mLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~-------------------~~~~L 222 (304)
T cd06430 162 MLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPE-------------------MLYVF 222 (304)
T ss_pred eeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCC-------------------eEEEc
Confidence 9999999997 4445543 333 35788999999999999531 46889
Q ss_pred ccccccccc--ccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHHhhhcCCCCCCCCCCcchHHHH
Q 008931 221 STLYNADVG--LYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKLEESLPGTGGGTNPKDEFAVK 298 (548)
Q Consensus 221 p~~YN~~~~--~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~lee~~pg~~gg~~~~~~~i~k 298 (548)
|++||++.+ .|....+. .+.++++|||.+ ++.| ..+..+..+.+++.++|..- |.+-+.+++.+
T Consensus 223 p~~wN~~~d~~~y~~~~~~-~~~~~~~~~H~n-~~~~--------~~~~~~~f~~~~~~~~~~~~----g~~~~~~~~~~ 288 (304)
T cd06430 223 PCHWNYRPDHCMYGSNCKA-AEEEGVFILHGN-RGVY--------HSDKQPAFRAVYEAIREYTF----GDDLHQSLLRP 288 (304)
T ss_pred CccccCCccceeecccccc-cccccceEEEcC-CCCC--------CCccchHHHHHHHHHHhccc----ccchHHHhHHH
Confidence 999998654 34433321 245799999997 4333 23445788999999988754 45666667666
Q ss_pred HHHHHH
Q 008931 299 VLFLLP 304 (548)
Q Consensus 299 ~l~~lp 304 (548)
+..-|+
T Consensus 289 l~~~~~ 294 (304)
T cd06430 289 LELSLQ 294 (304)
T ss_pred HHHHhh
Confidence 555443
No 12
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.90 E-value=1.9e-23 Score=209.96 Aligned_cols=191 Identities=16% Similarity=0.127 Sum_probs=136.0
Q ss_pred EEEeCcchHHHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHc----CCEEEEeeeecCCCCCC--C--ccchhh
Q 008931 35 TLLYGDEFLLGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKAD----GWIVEKISLLENPNQVR--P--KRFWGV 105 (548)
Q Consensus 35 tl~tdd~YL~~a~VLi~SL~~~~s~~dlVv-Ivtd~ls~e~~~~Lk~~----g~~v~~I~~I~~p~~~~--~--~r~~~s 105 (548)
++++++.|++++.|++.||.+|+ +.++.+ ++++++|++.++.|++. +.++..+++ +.|...+ + .+...+
T Consensus 5 ~~~~~~~y~~~~~v~l~Sll~nn-~~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i-~~~~~~~~~~~~~~~~~~ 82 (248)
T cd06432 5 SVASGHLYERFLRIMMLSVMKNT-KSPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTY-KWPRWLHKQTEKQRIIWG 82 (248)
T ss_pred EEcCcHHHHHHHHHHHHHHHHcC-CCCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEe-cChhhhhcccccchhHHH
Confidence 34677899999999999999997 344433 55689999998888774 333333322 2221111 1 111235
Q ss_pred hhhhhcccc-c-CccEEEEEcCcccccCCchHhhcchh---hhccc------------------------CCCCcccceE
Q 008931 106 YTKLKIFNM-T-NYKKVVYLDADTIVIKNIEDLFKCRK---FCANL------------------------KHSERLNSGV 156 (548)
Q Consensus 106 y~KL~l~~L-~-eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav------------------------~~~~yFNSGV 156 (548)
|.||.+..+ + ++|||||||+|+||.+||+|||+++. ++|++ +...||||||
T Consensus 83 y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGV 162 (248)
T cd06432 83 YKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISAL 162 (248)
T ss_pred HHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceee
Confidence 778877754 4 69999999999999999999999862 33332 1124999999
Q ss_pred EEEeCCHHHHHHHHHHHHh--------cCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccc
Q 008931 157 MVVEPSAAVFNDMMTKVNT--------LGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADV 228 (548)
Q Consensus 157 MLInps~~~f~~Ile~l~~--------~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~ 228 (548)
|+||+++||.+++.+++.+ ..++.++|||+||.++.+. ++..||.+||+..
T Consensus 163 mliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~---------------------~i~~Lp~~w~~~~ 221 (248)
T cd06432 163 YVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQV---------------------PIFSLPQEWLWCE 221 (248)
T ss_pred EEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccC---------------------CeEECChHHHHHH
Confidence 9999999999998885432 1347789999999999884 3678999999842
Q ss_pred cccccccccccCCCCcEEEEeeCCC
Q 008931 229 GLYMLANKWMVDESELHVIHYTLGP 253 (548)
Q Consensus 229 ~~Y~~~~~w~~~~~~~~IIHFt~Gp 253 (548)
.-.++..++.+++|||+-.|
T Consensus 222 -----~~~~~~~~~~~~~~~~~~~~ 241 (248)
T cd06432 222 -----TWCSDESKKKAKTIDLCNNP 241 (248)
T ss_pred -----HHhcccccCccceeecccCC
Confidence 11123457899999996444
No 13
>PLN02523 galacturonosyltransferase
Probab=99.88 E-value=4.9e-22 Score=215.19 Aligned_cols=214 Identities=19% Similarity=0.225 Sum_probs=145.6
Q ss_pred EeCcchHHHHHHHHHHHHHhCC-CCCEEE-EEcCCCCHHHHHHHHHcC----CE--EEEeee---ecC---CC-----C-
Q 008931 37 LYGDEFLLGVRVLGKSIRDTGS-NKDMVV-LVSDGVSDYSKKLLKADG----WI--VEKISL---LEN---PN-----Q- 96 (548)
Q Consensus 37 ~tdd~YL~~a~VLi~SL~~~~s-~~dlVv-Ivtd~ls~e~~~~Lk~~g----~~--v~~I~~---I~~---p~-----~- 96 (548)
+.+|| +.++.|.+.|+..|.. ..++|+ |+||+++...++.+-..+ .. +..|+. .+. |- .
T Consensus 253 ifSdN-vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~ 331 (559)
T PLN02523 253 IFSDN-VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESA 331 (559)
T ss_pred EecCc-chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhh
Confidence 45666 9999999999999953 445654 789999988777664432 22 233331 110 10 0
Q ss_pred ----------------------CC-Cccc-hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc--
Q 008931 97 ----------------------VR-PKRF-WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL-- 146 (548)
Q Consensus 97 ----------------------~~-~~r~-~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav-- 146 (548)
.+ ++.+ ..+|.||+++++ +++|||||||+|+||.+||++||++|. ..|++
T Consensus 332 ~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeD 411 (559)
T PLN02523 332 NLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVET 411 (559)
T ss_pred hhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehh
Confidence 00 1212 267999999997 779999999999999999999999862 22221
Q ss_pred --------------CC---CCcccc-------eEEEEeCCHHHHHHHHHHHHh----cCCCCCChHHHHH---HHhcCCC
Q 008931 147 --------------KH---SERLNS-------GVMVVEPSAAVFNDMMTKVNT----LGSYTGGDQGFLN---SYYSDFP 195 (548)
Q Consensus 147 --------------~~---~~yFNS-------GVMLInps~~~f~~Ile~l~~----~~~~~~~DQDiLN---~~f~d~~ 195 (548)
++ ..|||+ |||+||+++|+.+++.++... .......|||.|| ..|.+
T Consensus 412 c~~~~~r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~g-- 489 (559)
T PLN02523 412 CFGSFHRYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYS-- 489 (559)
T ss_pred hhhHHHHHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcC--
Confidence 11 136666 999999999999999988642 2345679999996 78887
Q ss_pred CCcccCCCCccccccCCCCCCcccccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHH
Q 008931 196 NAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIR 275 (548)
Q Consensus 196 ~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir 275 (548)
++..|+.+||...-.|... ....+.+++.||||+ |+.|||..+.... .-+.|..+.
T Consensus 490 --------------------ri~~LD~rWNvlglGy~~~-i~~~~i~~paIIHYn-G~~KPWle~~i~~--yr~~W~kYl 545 (559)
T PLN02523 490 --------------------TTKPLDKSWHVLGLGYNPS-ISMDEIRNAAVIHFN-GNMKPWLDIAMNQ--FKPLWTKYV 545 (559)
T ss_pred --------------------ceEecCchhhccCCccCCC-ccccccCCCEEEEEC-CCCCccccCCCCc--chHHHHHHH
Confidence 3566778888643222211 112356889999996 9999998765432 246777765
Q ss_pred HH
Q 008931 276 VK 277 (548)
Q Consensus 276 ~~ 277 (548)
..
T Consensus 546 ~~ 547 (559)
T PLN02523 546 DY 547 (559)
T ss_pred cc
Confidence 43
No 14
>PLN02718 Probable galacturonosyltransferase
Probab=99.86 E-value=7.4e-22 Score=215.93 Aligned_cols=211 Identities=15% Similarity=0.143 Sum_probs=144.1
Q ss_pred EeCcchHHHHHHHHHHHHHhCCC-CCEEE-EEcCCCCHHHHHHHHHcC----CEE--EEeeeecC-CCC----------C
Q 008931 37 LYGDEFLLGVRVLGKSIRDTGSN-KDMVV-LVSDGVSDYSKKLLKADG----WIV--EKISLLEN-PNQ----------V 97 (548)
Q Consensus 37 ~tdd~YL~~a~VLi~SL~~~~s~-~dlVv-Ivtd~ls~e~~~~Lk~~g----~~v--~~I~~I~~-p~~----------~ 97 (548)
+.+|+|+ ++.|++.|+..|..+ .++++ |++|+++.+.++.+.... .++ ..++.... |.. .
T Consensus 318 ~~sDNvl-aasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~ 396 (603)
T PLN02718 318 VFSDNVL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSH 396 (603)
T ss_pred EEcCCce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhcccc
Confidence 3466774 899999999998422 35554 788999999988776652 222 22221111 110 1
Q ss_pred CCccc-hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc--------------------------
Q 008931 98 RPKRF-WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL-------------------------- 146 (548)
Q Consensus 98 ~~~r~-~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav-------------------------- 146 (548)
+++.+ ..+|.||+++++ ++++||||||+|+||.+||++||++|. .+|++
T Consensus 397 ~~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~ 476 (603)
T PLN02718 397 DPRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAK 476 (603)
T ss_pred ccccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhc
Confidence 12233 368999999997 679999999999999999999999862 22211
Q ss_pred ---CCCCcccceEEEEeCCHHHHHHHHHHHHh----cCCCCCChHHHHH---HHhcCCCCCcccCCCCccccccCCCCCC
Q 008931 147 ---KHSERLNSGVMVVEPSAAVFNDMMTKVNT----LGSYTGGDQGFLN---SYYSDFPNAHVFEPNLPLEVVNTRPVPN 216 (548)
Q Consensus 147 ---~~~~yFNSGVMLInps~~~f~~Ile~l~~----~~~~~~~DQDiLN---~~f~d~~~~~lf~P~~~~~l~~~~p~~~ 216 (548)
+...|||+||||||+++|+.+++.+.+.+ .......|||.|| ..|.+ +
T Consensus 477 ~fn~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~g----------------------r 534 (603)
T PLN02718 477 KFDPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYN----------------------Q 534 (603)
T ss_pred ccCCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcC----------------------c
Confidence 12357899999999999999988876543 2233568999998 88888 3
Q ss_pred cccccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHH
Q 008931 217 MERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDI 274 (548)
Q Consensus 217 ~~rLp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~i 274 (548)
+..|+.+||...-.|... ....+.+++.||||+ |+.|||...... ++-++|..+
T Consensus 535 i~~LD~rWNv~gLG~~~~-i~~~~i~~aaIIHYn-G~~KPWle~~i~--~yr~~W~k~ 588 (603)
T PLN02718 535 TVALDKRWHVLGLGHESG-VGASDIEQAAVIHYD-GVMKPWLDIGIG--KYKRYWNIH 588 (603)
T ss_pred eeecChHHhccCcccccc-ccccccCCCEEEEEC-CCCCccccCChh--hHHHHHHhh
Confidence 677888898643222211 111256899999996 999999976441 123556554
No 15
>PLN02867 Probable galacturonosyltransferase
Probab=99.84 E-value=4.3e-21 Score=207.94 Aligned_cols=145 Identities=14% Similarity=0.157 Sum_probs=107.7
Q ss_pred hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc-------------------------------CC
Q 008931 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL-------------------------------KH 148 (548)
Q Consensus 104 ~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav-------------------------------~~ 148 (548)
.+|.||++|++ +++|||||||+|+||.+||++||++|. ..|++ +.
T Consensus 331 lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~ 410 (535)
T PLN02867 331 LNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQE 410 (535)
T ss_pred HHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCC
Confidence 58999999997 789999999999999999999999972 22211 01
Q ss_pred CCcccceEEEEeCCHHHHHHHHHHHHh----c--CCCCCChHHHHHH---HhcCCCCCcccCCCCccccccCCCCCCccc
Q 008931 149 SERLNSGVMVVEPSAAVFNDMMTKVNT----L--GSYTGGDQGFLNS---YYSDFPNAHVFEPNLPLEVVNTRPVPNMER 219 (548)
Q Consensus 149 ~~yFNSGVMLInps~~~f~~Ile~l~~----~--~~~~~~DQDiLN~---~f~d~~~~~lf~P~~~~~l~~~~p~~~~~r 219 (548)
..|||+||||||+++|+.+++.+++.+ . ......|||.||. +|.+ ++..
T Consensus 411 ~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g----------------------~v~~ 468 (535)
T PLN02867 411 RCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKG----------------------HVHP 468 (535)
T ss_pred CcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcC----------------------cEEE
Confidence 347899999999999999999887633 2 1246689999996 7877 4678
Q ss_pred ccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHH
Q 008931 220 LSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQD 273 (548)
Q Consensus 220 Lp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ 273 (548)
|+.+||...-.|..........++++||||+ |+.|||..++... .-+.|..
T Consensus 469 LD~rWNv~gLgy~~~~~~~~~i~~paIIHYn-G~~KPW~e~~~~~--yR~~W~k 519 (535)
T PLN02867 469 IDPSWHVAGLGSRPPEVPREILESAAVLHFS-GPAKPWLEIGFPE--VRSLWYR 519 (535)
T ss_pred CChhhcccCCCcccccchhhhcCCcEEEEEC-CCCCcccccCCCc--hhHHHHH
Confidence 8899998321222111112346899999996 9999999887643 3456644
No 16
>PLN02769 Probable galacturonosyltransferase
Probab=99.82 E-value=4.3e-20 Score=202.97 Aligned_cols=215 Identities=18% Similarity=0.159 Sum_probs=140.1
Q ss_pred EEeCcchHHHHHHHHHHHHHhCCCCC-EEE-EEcCCCCHHHHHH-HHH--c-C--CEEEEeeeecC-------------C
Q 008931 36 LLYGDEFLLGVRVLGKSIRDTGSNKD-MVV-LVSDGVSDYSKKL-LKA--D-G--WIVEKISLLEN-------------P 94 (548)
Q Consensus 36 l~tdd~YL~~a~VLi~SL~~~~s~~d-lVv-Ivtd~ls~e~~~~-Lk~--~-g--~~v~~I~~I~~-------------p 94 (548)
.+.+|| +..+.|.+.|...|..+.. +|+ |+||...-..++. +.. . + +++..++.+.. +
T Consensus 334 ~ifSdN-vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~~~~~~~~l~~~ 412 (629)
T PLN02769 334 VIFSKN-VLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDLDKFALKQLSLP 412 (629)
T ss_pred EEEecc-ceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeecccchHHHHhhccc
Confidence 345665 4468899999999965544 443 7788765443322 111 1 1 22222322211 0
Q ss_pred C--------------CC-CCccc-hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc--------
Q 008931 95 N--------------QV-RPKRF-WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL-------- 146 (548)
Q Consensus 95 ~--------------~~-~~~r~-~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav-------- 146 (548)
. .. +++.. ..+|.||+++++ ++.+||||||+|+||.+||++||++|. ..|++
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~ 492 (629)
T PLN02769 413 EEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLG 492 (629)
T ss_pred hhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhh
Confidence 0 00 12222 268999999997 679999999999999999999999872 33322
Q ss_pred ------------CCCCcccceEEEEeCCHHHHHHHHHHHHh----c-----CCCCCChHHHHHHHhcCCCCCcccCCCCc
Q 008931 147 ------------KHSERLNSGVMVVEPSAAVFNDMMTKVNT----L-----GSYTGGDQGFLNSYYSDFPNAHVFEPNLP 205 (548)
Q Consensus 147 ------------~~~~yFNSGVMLInps~~~f~~Ile~l~~----~-----~~~~~~DQDiLN~~f~d~~~~~lf~P~~~ 205 (548)
++..|||+||||||+++|+.+++.+.+.+ . ..+..+||+++|.+|.+
T Consensus 493 ~~~~yl~~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g------------ 560 (629)
T PLN02769 493 QLKNYLGDTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQD------------ 560 (629)
T ss_pred hhhhhhcccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcC------------
Confidence 12357899999999999999888776542 1 12344678888899998
Q ss_pred cccccCCCCCCcccccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHH
Q 008931 206 LEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVK 277 (548)
Q Consensus 206 ~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~ 277 (548)
++..|+.+||...-.|...-.+ ...++++||||+ |+.|||..+... +.-+.|+.+...
T Consensus 561 ----------~v~~LD~rWNv~gLG~~~~i~~-~~i~~paIIHYn-G~~KPW~e~~i~--~yr~~W~kYl~~ 618 (629)
T PLN02769 561 ----------LIYPLDDRWVLSGLGHDYGIDE-QAIKKAAVLHYN-GNMKPWLELGIP--KYKKYWKRFLNR 618 (629)
T ss_pred ----------eEEECCHHHccccccccccccc-cccCCcEEEEEC-CCCCCccCCCCC--hHHHHHHHHhcc
Confidence 3677889999753212111111 256899999996 999999987543 234678877554
No 17
>PLN02659 Probable galacturonosyltransferase
Probab=99.81 E-value=1.8e-20 Score=202.53 Aligned_cols=149 Identities=14% Similarity=0.177 Sum_probs=111.8
Q ss_pred hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhcccC-------------------------------C
Q 008931 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANLK-------------------------------H 148 (548)
Q Consensus 104 ~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav~-------------------------------~ 148 (548)
.+|.||+++++ +++|||||||+|+||.+||+|||++|. .+|++. .
T Consensus 330 ~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~~ 409 (534)
T PLN02659 330 MNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDPN 409 (534)
T ss_pred HHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCcc
Confidence 58999999997 789999999999999999999999962 222110 1
Q ss_pred CCcccceEEEEeCCHHHHHHHHHHHHh----c--CCCCCChHHHH---HHHhcCCCCCcccCCCCccccccCCCCCCccc
Q 008931 149 SERLNSGVMVVEPSAAVFNDMMTKVNT----L--GSYTGGDQGFL---NSYYSDFPNAHVFEPNLPLEVVNTRPVPNMER 219 (548)
Q Consensus 149 ~~yFNSGVMLInps~~~f~~Ile~l~~----~--~~~~~~DQDiL---N~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~r 219 (548)
..|||+|||+||+++|+.+++.+++.+ . ..+...|||+| |..|.+ ++..
T Consensus 410 ~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g----------------------~v~~ 467 (534)
T PLN02659 410 ECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHG----------------------HVHV 467 (534)
T ss_pred ccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcC----------------------CEEE
Confidence 247889999999999999988887644 2 23567899999 588988 3677
Q ss_pred ccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHHh
Q 008931 220 LSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKL 278 (548)
Q Consensus 220 Lp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~l 278 (548)
|+.+||...-.|...... ...++++||||+ |+.|||..|+... .-+.|..+...-
T Consensus 468 LD~rWN~~gLg~~~~~~~-~~i~~paIIHYn-G~~KPW~~~~~~~--yr~~W~kYl~~s 522 (534)
T PLN02659 468 IDPFWHMLGLGYQENTSL-ADAESAGVVHFN-GRAKPWLDIAFPQ--LRPLWAKYIDSS 522 (534)
T ss_pred CChhheecCCcccccccc-cccCCcEEEEEC-CCCCccccccCCc--chhHHHHHhccC
Confidence 888999743223222222 246899999996 9999999987643 346777765543
No 18
>PLN02870 Probable galacturonosyltransferase
Probab=99.79 E-value=7e-20 Score=197.95 Aligned_cols=150 Identities=15% Similarity=0.161 Sum_probs=111.6
Q ss_pred hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhcccC-------------------------------C
Q 008931 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANLK-------------------------------H 148 (548)
Q Consensus 104 ~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav~-------------------------------~ 148 (548)
.+|.||+++++ ++.|||||||+|+||++||++||++|. .+|++. .
T Consensus 329 lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~ 408 (533)
T PLN02870 329 LNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPE 408 (533)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcc
Confidence 68999999997 779999999999999999999999962 332211 1
Q ss_pred CCcccceEEEEeCCHHHHHHHHHHHHh----c--CCCCCChHHHH---HHHhcCCCCCcccCCCCccccccCCCCCCccc
Q 008931 149 SERLNSGVMVVEPSAAVFNDMMTKVNT----L--GSYTGGDQGFL---NSYYSDFPNAHVFEPNLPLEVVNTRPVPNMER 219 (548)
Q Consensus 149 ~~yFNSGVMLInps~~~f~~Ile~l~~----~--~~~~~~DQDiL---N~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~r 219 (548)
..|||+|||+||+++|+.+++.+++.+ . ..+...|||+| |..|.+ ++..
T Consensus 409 ~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g----------------------~v~~ 466 (533)
T PLN02870 409 ECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKG----------------------HVHP 466 (533)
T ss_pred cceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcC----------------------ceEE
Confidence 246779999999999999998887643 2 24678999999 578888 3677
Q ss_pred ccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHHhh
Q 008931 220 LSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKLE 279 (548)
Q Consensus 220 Lp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~le 279 (548)
|+.+||...-.|.... .....++++||||+ |+.|||..+.... .-..|..+...-.
T Consensus 467 LD~rWN~~gLgy~~~~-~~~~i~~aaIIHY~-G~~KPW~~~~~~~--yr~~W~kYl~~s~ 522 (533)
T PLN02870 467 IDPSWHMLGLGYQSKT-NIESVKKAAVIHYN-GQSKPWLEIGFEH--LRPFWTKYVNYSN 522 (533)
T ss_pred CChHHhcCCCCCcccc-cccccCCcEEEEEC-CCCCCccccCccc--hhHHHHHHHccCc
Confidence 8889997432232221 12356899999996 9999999876543 2356776655543
No 19
>PLN02742 Probable galacturonosyltransferase
Probab=99.78 E-value=1.2e-18 Score=188.87 Aligned_cols=216 Identities=22% Similarity=0.204 Sum_probs=142.7
Q ss_pred EEeCcchHHHHHHHHHHHHHhCCCCC-EEE-EEcCCCCHHHHHHHHHc----CC--EEEEeee---ecC---C-------
Q 008931 36 LLYGDEFLLGVRVLGKSIRDTGSNKD-MVV-LVSDGVSDYSKKLLKAD----GW--IVEKISL---LEN---P------- 94 (548)
Q Consensus 36 l~tdd~YL~~a~VLi~SL~~~~s~~d-lVv-Ivtd~ls~e~~~~Lk~~----g~--~v~~I~~---I~~---p------- 94 (548)
.+.+|| +..+.|.+.|...|..+.. +|+ ++||...-..++..-.. +. .+..++. ++. |
T Consensus 231 ~ifSdN-vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~ 309 (534)
T PLN02742 231 CVFSDN-ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQD 309 (534)
T ss_pred EEEecc-chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHHHHhhh
Confidence 345655 4578899999999865543 444 78887665544433222 12 2222222 211 1
Q ss_pred -C-----------------CCC-Cccc-hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc----
Q 008931 95 -N-----------------QVR-PKRF-WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL---- 146 (548)
Q Consensus 95 -~-----------------~~~-~~r~-~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav---- 146 (548)
+ ..+ ++.+ ...|.||+++++ ++.+||||||+|+||.+||+|||++|. .+|++
T Consensus 310 ~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~ 389 (534)
T PLN02742 310 SDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCL 389 (534)
T ss_pred hhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchh
Confidence 0 001 2222 268999999997 679999999999999999999999972 22211
Q ss_pred ----------------------CCCCcccceEEEEeCCHHHHHHHHHHHHh----cCCCCCChHHHHHHH---hcCCCCC
Q 008931 147 ----------------------KHSERLNSGVMVVEPSAAVFNDMMTKVNT----LGSYTGGDQGFLNSY---YSDFPNA 197 (548)
Q Consensus 147 ----------------------~~~~yFNSGVMLInps~~~f~~Ile~l~~----~~~~~~~DQDiLN~~---f~d~~~~ 197 (548)
+...+||+||||||+++|+.+++.+.... .......|||.||.. |.+
T Consensus 390 ~~f~ry~~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g---- 465 (534)
T PLN02742 390 ETFHRYHKYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYG---- 465 (534)
T ss_pred hhhhhhhhhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcC----
Confidence 23468999999999999999988885532 234567899999964 777
Q ss_pred cccCCCCccccccCCCCCCcccccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHH
Q 008931 198 HVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVK 277 (548)
Q Consensus 198 ~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~ 277 (548)
++..|+..||...-.|..... ....+++.||||+ |+.|||...+... +-++|..+...
T Consensus 466 ------------------~~~~LD~rWNv~gLG~~~~v~-~~~i~~aaILHyn-G~~KPWl~~~i~~--yr~~W~kYl~~ 523 (534)
T PLN02742 466 ------------------LTEPLDRRWHVLGLGYDTNID-PRLIESAAVLHFN-GNMKPWLKLAIER--YKPLWERYVNY 523 (534)
T ss_pred ------------------cceecChhheecccccccccc-hhhccCCeEEEEC-CCCCcccccCCcc--cchHHHHHHcc
Confidence 356678888874222221111 1257899999996 9999999875432 34688877554
Q ss_pred h
Q 008931 278 L 278 (548)
Q Consensus 278 l 278 (548)
-
T Consensus 524 s 524 (534)
T PLN02742 524 S 524 (534)
T ss_pred C
Confidence 3
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=99.77 E-value=5.9e-19 Score=193.17 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=108.7
Q ss_pred hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc--------------------------CCCCccc
Q 008931 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL--------------------------KHSERLN 153 (548)
Q Consensus 104 ~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav--------------------------~~~~yFN 153 (548)
.+|.||+++++ ++++||||||+|+||.+||++||++|. .+|++ +...|||
T Consensus 443 lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFN 522 (639)
T PLN02829 443 LNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWA 522 (639)
T ss_pred HHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCccccee
Confidence 68999999997 679999999999999999999999972 22211 1345899
Q ss_pred ceEEEEeCCHHHHHHHHHHHHh----cCCCCCChHHHHHHH---hcCCCCCcccCCCCccccccCCCCCCcccccccccc
Q 008931 154 SGVMVVEPSAAVFNDMMTKVNT----LGSYTGGDQGFLNSY---YSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNA 226 (548)
Q Consensus 154 SGVMLInps~~~f~~Ile~l~~----~~~~~~~DQDiLN~~---f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~ 226 (548)
+||||||++.|+.+++.+++.+ ...-...|||.||.. |.+ ++..|+.+||.
T Consensus 523 SGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g----------------------~i~~LD~rWNv 580 (639)
T PLN02829 523 YGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWK----------------------RTYPLDRSWHV 580 (639)
T ss_pred cceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcC----------------------ceEecChhhee
Confidence 9999999999999998877643 222245899999976 466 35667888887
Q ss_pred cccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHH
Q 008931 227 DVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVK 277 (548)
Q Consensus 227 ~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~ 277 (548)
..-.|... ....+.+++.||||+ |+.|||....... +-++|..+...
T Consensus 581 ~GLGy~~~-v~~~~i~~aaIIHyn-G~~KPWle~~i~~--yr~lW~kYl~~ 627 (639)
T PLN02829 581 LGLGYNPN-VNQRDIERAAVIHYN-GNMKPWLEIGIPK--YRNYWSKYVDY 627 (639)
T ss_pred cCCCCCcc-cchhcccCCeEEEEC-CCCCccccCCccc--chHHHHHHHhc
Confidence 53222211 112367889999996 9999999875533 34678776544
No 21
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.76 E-value=1.9e-18 Score=189.03 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=108.0
Q ss_pred hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc--------------------------CCCCccc
Q 008931 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL--------------------------KHSERLN 153 (548)
Q Consensus 104 ~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav--------------------------~~~~yFN 153 (548)
.+|.|++++++ ++.+||||||+|+||.+||++||++|. .+|++ +...|||
T Consensus 461 lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyfN 540 (657)
T PLN02910 461 LNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWA 540 (657)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCceee
Confidence 57899999997 679999999999999999999999972 22211 1235667
Q ss_pred ceEEEEeCCHHHHHHHHHHHHh----cCCCCCChHHHHH---HHhcCCCCCcccCCCCccccccCCCCCCcccccccccc
Q 008931 154 SGVMVVEPSAAVFNDMMTKVNT----LGSYTGGDQGFLN---SYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNA 226 (548)
Q Consensus 154 SGVMLInps~~~f~~Ile~l~~----~~~~~~~DQDiLN---~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~ 226 (548)
+|||+||++.|+.+++.+.... ..+....|||.|| ..|.+. +..|+.+||.
T Consensus 541 sGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~----------------------i~pLD~rWNv 598 (657)
T PLN02910 541 FGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNL----------------------TYPLDRSWHV 598 (657)
T ss_pred cccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCc----------------------eeecCchhee
Confidence 7999999999999988875432 2456789999999 678873 5667888887
Q ss_pred cccccccccccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHH
Q 008931 227 DVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRV 276 (548)
Q Consensus 227 ~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~ 276 (548)
..-.|.. .......+++.||||+ |+.|||....... +-+.|..+..
T Consensus 599 ~GLGyd~-~v~~~~i~~AAVLHyn-G~~KPWl~l~i~~--Yr~~W~kYl~ 644 (657)
T PLN02910 599 LGLGYDP-ALNQTEIENAAVVHYN-GNYKPWLDLAIAK--YKPYWSRYVQ 644 (657)
T ss_pred cCCCCCc-ccccccccCcEEEEeC-CCCCcccccCccc--chHHHHHHcc
Confidence 5322221 1122367889999997 9999999875532 2356766543
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.66 E-value=2.7e-17 Score=166.83 Aligned_cols=207 Identities=28% Similarity=0.406 Sum_probs=130.9
Q ss_pred CCCeEEEEEEeCcchHHH-HHHHHHHHHHhC-CCCCEEE-EEcCCCCHHHHHHHHHcCCEEEEeeeec------CCCCC-
Q 008931 28 STDQAYVTLLYGDEFLLG-VRVLGKSIRDTG-SNKDMVV-LVSDGVSDYSKKLLKADGWIVEKISLLE------NPNQV- 97 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~-a~VLi~SL~~~~-s~~dlVv-Ivtd~ls~e~~~~Lk~~g~~v~~I~~I~------~p~~~- 97 (548)
.+++|+.+.++..++.+. +.++++-|+.+. ++..+|. +.-+++.+-..+.|+..|..+..|+.|+ .-...
T Consensus 68 ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di~ 147 (368)
T COG5597 68 NGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDIK 147 (368)
T ss_pred cCcccccchhhhhceeecccceehhhhhhcCcchhheeeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhccC
Confidence 344555555555544444 566666666654 3445543 4445666655555555543222222211 11111
Q ss_pred -CCccchhhhhhhhcccccCccEEEEEcCcccccCCchHhhcch--hhhcc-----------------------------
Q 008931 98 -RPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCR--KFCAN----------------------------- 145 (548)
Q Consensus 98 -~~~r~~~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp--~~~Aa----------------------------- 145 (548)
...+|...|+||.+|+++|||||+|||+|.|+++|||+||+.| ++.++
T Consensus 148 ~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg 227 (368)
T COG5597 148 PDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYG 227 (368)
T ss_pred cCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhc
Confidence 2356778999999999999999999999999999999999987 32210
Q ss_pred -----c--------------------CCCCcccceEEEEeCCHHHHHHHHHHHHhc--CCCCCChHHHHHHHhcCCCCCc
Q 008931 146 -----L--------------------KHSERLNSGVMVVEPSAAVFNDMMTKVNTL--GSYTGGDQGFLNSYYSDFPNAH 198 (548)
Q Consensus 146 -----v--------------------~~~~yFNSGVMLInps~~~f~~Ile~l~~~--~~~~~~DQDiLN~~f~d~~~~~ 198 (548)
+ .++.+||+|+|+++|++..+.+++....-. ....--.|.++|..++..
T Consensus 228 ~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~---- 303 (368)
T COG5597 228 KMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYE---- 303 (368)
T ss_pred ccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhh----
Confidence 0 124689999999999999999988876221 112223688999888763
Q ss_pred ccCCCCccccccCCCCCCcccccccccccccccccccccccCCCCcEEEEeeCCCCCCCCCCccCC
Q 008931 199 VFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLANKWMVDESELHVIHYTLGPLKPWDWWTSWL 264 (548)
Q Consensus 199 lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~ 264 (548)
-|.| |.++...||- |.... .+..-.+.+|+ |||+..+..+
T Consensus 304 g~FP--------------werld~~yNG----~wa~~---ndlPylka~Hg-----K~W~y~g~~f 343 (368)
T COG5597 304 GFFP--------------WERLDPRYNG----YWADA---NDLPYLKAWHG-----KPWFYTGEQF 343 (368)
T ss_pred ccCc--------------hhhcCccccc----ccccc---cccchHHHhhc-----CcCCCCcccC
Confidence 2233 8999999993 22111 02234556666 9999876643
No 23
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=98.24 E-value=6.1e-07 Score=95.55 Aligned_cols=91 Identities=36% Similarity=0.539 Sum_probs=81.6
Q ss_pred hhhhhhhcccccCccEEEEEcCcccccCCchHhhc-chhhhcccCCCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCCC
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFK-CRKFCANLKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTGG 182 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~-lp~~~Aav~~~~yFNSGVMLInps~~~f~~Ile~l~~~~~~~~~ 182 (548)
-.+.|++.|.+..+++.+-+|+|..++++.+.+|. ++..++.-..+..||+|.|++.|+...++++.+...+...+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~ 230 (369)
T KOG1950|consen 151 LNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGA 230 (369)
T ss_pred hcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccceeccCccccCCCccchhhHHHhhcccCCCCCc
Confidence 46889999999999999999999999999999999 77777766666779999999999999999988877777788899
Q ss_pred hHHHHHHHhcCC
Q 008931 183 DQGFLNSYYSDF 194 (548)
Q Consensus 183 DQDiLN~~f~d~ 194 (548)
||+++|.+|...
T Consensus 231 ~q~~l~~~f~~~ 242 (369)
T KOG1950|consen 231 DQGFLHLIFSWI 242 (369)
T ss_pred cchhhHHHhhcc
Confidence 999999999984
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=97.93 E-value=4.4e-05 Score=78.20 Aligned_cols=114 Identities=22% Similarity=0.319 Sum_probs=78.8
Q ss_pred EEeCcchHHHHHHHHHHHHHhCCCCCEEEEEc--CCCCHHHHHHHHH-cCCEEEEeeeecCCCCCCCccch--hhhhhhh
Q 008931 36 LLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVS--DGVSDYSKKLLKA-DGWIVEKISLLENPNQVRPKRFW--GVYTKLK 110 (548)
Q Consensus 36 l~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvt--d~ls~e~~~~Lk~-~g~~v~~I~~I~~p~~~~~~r~~--~sy~KL~ 110 (548)
+..++.++..+..+++.||+.+++-++-|++. ++++++.++.|.. ..+....++.+-.++.. +.... .-..|.+
T Consensus 6 i~~g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~-~~~~~~~~~~~K~l 84 (271)
T PF11051_consen 6 ITAGDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYL-GKSFSKKGFQNKWL 84 (271)
T ss_pred EEecCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeecccc-ccccccCCchhhhh
Confidence 45577999999999999999999999888776 7899999888876 22222222222112111 11011 2234544
Q ss_pred cccccCccEEEEEcCcccccCCchHhhcchhhhcccCCCCcccceEEEE
Q 008931 111 IFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCANLKHSERLNSGVMVV 159 (548)
Q Consensus 111 l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp~~~Aav~~~~yFNSGVMLI 159 (548)
+--...++.||+||+|++.++|+++||+.+ .|-.+|.++.
T Consensus 85 A~l~ssFeevllLDaD~vpl~~p~~lF~~~---------~yk~tG~lfw 124 (271)
T PF11051_consen 85 ALLFSSFEEVLLLDADNVPLVDPEKLFESE---------EYKKTGALFW 124 (271)
T ss_pred hhhhCCcceEEEEcCCcccccCHHHHhcCc---------cccccCEEEE
Confidence 444578999999999999999999999854 4666776666
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.79 E-value=0.00016 Score=70.51 Aligned_cols=165 Identities=13% Similarity=0.152 Sum_probs=91.8
Q ss_pred CCHHHHHHHHHcCCEEEEeeeecCCCC-----CCCccc-hhhhhhhhcc-cc-cCccEEEEEcCcccccCCchHhhcchh
Q 008931 70 VSDYSKKLLKADGWIVEKISLLENPNQ-----VRPKRF-WGVYTKLKIF-NM-TNYKKVVYLDADTIVIKNIEDLFKCRK 141 (548)
Q Consensus 70 ls~e~~~~Lk~~g~~v~~I~~I~~p~~-----~~~~r~-~~sy~KL~l~-~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~ 141 (548)
+++++.+.+++.+.....+.....+.. .....+ .-++.|..+- ++ ..--.|+++|+|++.++|+.++|+.+.
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 456777888888766433332211111 111122 2345565443 22 233459999999999999999993221
Q ss_pred --hhc--cc-------CCCCcccceEEEEeCCHHHHH---HHHHHHHhcCCCCCChHHHHHHHhcCCCCCcccCCCCccc
Q 008931 142 --FCA--NL-------KHSERLNSGVMVVEPSAAVFN---DMMTKVNTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLE 207 (548)
Q Consensus 142 --~~A--av-------~~~~yFNSGVMLInps~~~f~---~Ile~l~~~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~ 207 (548)
+.. +. .....+|+|+|.++++..... +..+.+.+. -...||.++|.++..... ..
T Consensus 91 ~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~-----~~---- 159 (212)
T PF03407_consen 91 ADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCWDQQAFNELLREQAA-----RY---- 159 (212)
T ss_pred CceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcchHHHHHHHHHhccc-----CC----
Confidence 111 11 123457999999999986643 333333333 233599999999988420 00
Q ss_pred cccCCCCCCcccccccccccccccccc-cccccC--CCCcEEEEee
Q 008931 208 VVNTRPVPNMERLSTLYNADVGLYMLA-NKWMVD--ESELHVIHYT 250 (548)
Q Consensus 208 l~~~~p~~~~~rLp~~YN~~~~~Y~~~-~~w~~~--~~~~~IIHFt 250 (548)
..+ ++..||...-.+-..|... ..|... ..++++||.+
T Consensus 160 ----~~~-~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n 200 (212)
T PF03407_consen 160 ----GGL-RVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHAN 200 (212)
T ss_pred ----cCc-EEEEeCHHHeeccccceeecchhhhhccccccceEEEc
Confidence 011 4667775544322222222 223322 4689999996
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=96.49 E-value=0.012 Score=70.41 Aligned_cols=195 Identities=15% Similarity=0.178 Sum_probs=119.7
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHc----CCEEEEeeeecCCCCCCCccch--h
Q 008931 32 AYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKAD----GWIVEKISLLENPNQVRPKRFW--G 104 (548)
Q Consensus 32 AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVv-Ivtd~ls~e~~~~Lk~~----g~~v~~I~~I~~p~~~~~~r~~--~ 104 (548)
-.-+++.+.-|=..+..++.|+.+| ++.++-+ +...=+|+..++.+-.+ +.++.-|+ -+.|.-.++.+.. .
T Consensus 1183 NIFSvASGHLYERflrIMm~Svlkn-TktpVKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~-YkWPrWLhqQ~EKQRi 1260 (1470)
T KOG1879|consen 1183 NIFSVASGHLYERFLRIMMLSVLKN-TKTPVKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQ-YKWPRWLHQQTEKQRI 1260 (1470)
T ss_pred EEEeeccccHHHHHHHHHHHHHHhC-CCCceeEEeehhhcChHHHHHHHHHHHHhCceEEEEE-ecCchhhhhhhhhhhh
Confidence 3445667889999999999999999 4555433 45445788766655443 33432222 2456433221110 0
Q ss_pred h-hhhh-hcccc--cCccEEEEEcCcccccCCchHhhcchh---------hhcc---c---------------CCCCccc
Q 008931 105 V-YTKL-KIFNM--TNYKKVVYLDADTIVIKNIEDLFKCRK---------FCAN---L---------------KHSERLN 153 (548)
Q Consensus 105 s-y~KL-~l~~L--~eYdRVLYLDaDtLVl~dLDeLF~lp~---------~~Aa---v---------------~~~~yFN 153 (548)
. =+|+ ++-=| .+.+||||+|+|-||..|++||.+++. +|-. | ....|-=
T Consensus 1261 iWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkYHI 1340 (1470)
T KOG1879|consen 1261 IWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKYHI 1340 (1470)
T ss_pred hhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCcccc
Confidence 0 1333 33223 479999999999999999999988862 4431 1 1246767
Q ss_pred ceEEEEeCCHHHHHHHHHHHHh--------cCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccc
Q 008931 154 SGVMVVEPSAAVFNDMMTKVNT--------LGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYN 225 (548)
Q Consensus 154 SGVMLInps~~~f~~Ile~l~~--------~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN 225 (548)
|...|+|+++-|.-.--++++. ..++..-|||+=|.+.+.- .+.-||..|=
T Consensus 1341 SALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqV---------------------pIkSLPqeWL 1399 (1470)
T KOG1879|consen 1341 SALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQV---------------------PIKSLPQEWL 1399 (1470)
T ss_pred ceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeec---------------------ccccCCcchh
Confidence 8999999886443322233321 2356667999988887652 3577777753
Q ss_pred cccccccccccc--ccCCCCcEEEEeeCCCCCCCCC
Q 008931 226 ADVGLYMLANKW--MVDESELHVIHYTLGPLKPWDW 259 (548)
Q Consensus 226 ~~~~~Y~~~~~w--~~~~~~~~IIHFt~Gp~KPW~~ 259 (548)
+ .+.| +..++++++|.-| .-||..
T Consensus 1400 W-------CETWC~d~skkkAktIDLC---nNP~TK 1425 (1470)
T KOG1879|consen 1400 W-------CETWCDDESKKKAKTIDLC---NNPLTK 1425 (1470)
T ss_pred h-------hhhhcCchhhhhchhhhhh---cCcccc
Confidence 2 2223 2256788899886 356654
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=91.06 E-value=0.66 Score=50.50 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=49.7
Q ss_pred cCccEEEEEcCcccccCCchHhhcch--hhhc-c------------cCCCCcccceEEEEeCCHHHHHHHHHHH------
Q 008931 115 TNYKKVVYLDADTIVIKNIEDLFKCR--KFCA-N------------LKHSERLNSGVMVVEPSAAVFNDMMTKV------ 173 (548)
Q Consensus 115 ~eYdRVLYLDaDtLVl~dLDeLF~lp--~~~A-a------------v~~~~yFNSGVMLInps~~~f~~Ile~l------ 173 (548)
++.|=+-|||+|++|++. -|++| .+-. + -+.-..+|+|+++|+...|..+=+-..+
T Consensus 196 PeaEWiWWLDsDALImNm---sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~ 272 (429)
T PLN03182 196 PEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKG 272 (429)
T ss_pred CCceEEEEecCCceeecC---CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCC
Confidence 689999999999999873 23333 1110 0 0123579999999999987654332211
Q ss_pred ----------H----hcCCCCCChHHHHHHHhcC
Q 008931 174 ----------N----TLGSYTGGDQGFLNSYYSD 193 (548)
Q Consensus 174 ----------~----~~~~~~~~DQDiLN~~f~d 193 (548)
. ....+...||..|-++...
T Consensus 273 ~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~ 306 (429)
T PLN03182 273 PIRDEAGKILTAELKGRPAFEADDQSALVYLLLT 306 (429)
T ss_pred chhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHh
Confidence 1 1134567899999998844
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=89.63 E-value=0.17 Score=51.19 Aligned_cols=91 Identities=18% Similarity=0.225 Sum_probs=17.9
Q ss_pred hhhhhhhccc--c---cCccEEEEEcCcccccCCchHh---hc----chhh-------------hc---c--------c-
Q 008931 104 GVYTKLKIFN--M---TNYKKVVYLDADTIVIKNIEDL---FK----CRKF-------------CA---N--------L- 146 (548)
Q Consensus 104 ~sy~KL~l~~--L---~eYdRVLYLDaDtLVl~dLDeL---F~----lp~~-------------~A---a--------v- 146 (548)
.+|.|+.+-+ + +++|=|.|||+|++|.+.=-+| +. ++.. .. . +
T Consensus 59 ~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~ 138 (239)
T PF05637_consen 59 GSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLII 138 (239)
T ss_dssp HHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4567765433 2 6789999999999999843332 22 0100 00 0 0
Q ss_pred -CCCCcccceEEEEeCCHHHHHHHHHHHHhc----CC---CCCChHHHHHHHhcCCC
Q 008931 147 -KHSERLNSGVMVVEPSAAVFNDMMTKVNTL----GS---YTGGDQGFLNSYYSDFP 195 (548)
Q Consensus 147 -~~~~yFNSGVMLInps~~~f~~Ile~l~~~----~~---~~~~DQDiLN~~f~d~~ 195 (548)
.....+|+|+++++.+.|.. .+++...+. .. ....||+.|-.+++.++
T Consensus 139 t~d~~gLNtGsFliRns~ws~-~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~ 194 (239)
T PF05637_consen 139 TQDWNGLNTGSFLIRNSPWSR-DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHP 194 (239)
T ss_dssp ---------------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence 13467999999999999886 455554321 11 23689999999988753
No 29
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=89.33 E-value=0.36 Score=52.00 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=48.9
Q ss_pred EEEcCcccccCCchHhhcchhhhcccCCCCcccceEEEEeCCHHHHHHHHHH-HHhc--CCCCCChHHHHHHHhcCCC
Q 008931 121 VYLDADTIVIKNIEDLFKCRKFCANLKHSERLNSGVMVVEPSAAVFNDMMTK-VNTL--GSYTGGDQGFLNSYYSDFP 195 (548)
Q Consensus 121 LYLDaDtLVl~dLDeLF~lp~~~Aav~~~~yFNSGVMLInps~~~f~~Ile~-l~~~--~~~~~~DQDiLN~~f~d~~ 195 (548)
||||+|+||++|+.+|=+.=...++-....+.|.+||.+++...--.+.++. ..+. +.+..+-.+++..+.+.+.
T Consensus 242 vYLDTDvIvLksl~~l~N~ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~c 319 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNVIGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRWC 319 (409)
T ss_pred EEeeccEEEecccccccccccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHh
Confidence 8999999999999988753111112134468999999999996554444444 3333 2344455667777776543
No 30
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=87.06 E-value=3 Score=43.23 Aligned_cols=169 Identities=12% Similarity=0.098 Sum_probs=92.7
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEE-EEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccch-hhh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMV-VLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFW-GVY 106 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlV-vIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~-~sy 106 (548)
+.+...++++ .|....--.++|..++- .+++.+ ++.||.-+.-..-. .|. .+.+.++..+. ..+|. .+.
T Consensus 35 tIgl~vfatG-kY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~---lg~-~r~~~V~~v~~---~~~W~~~sl 106 (271)
T cd02515 35 TIGLTVFAVG-KYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVE---LGP-GRRLTVLKIAE---ESRWQDISM 106 (271)
T ss_pred EEEEEEEEec-cHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccc---cCC-CceeEEEEecc---ccCCcHHHH
Confidence 5566666655 68888888888888874 455544 36677432200000 110 11222222211 13342 567
Q ss_pred hhhhccc-------ccCccEEEEEcCcccccCCch-Hhhc----c--hhh---------------hcc-cC--CCC-ccc
Q 008931 107 TKLKIFN-------MTNYKKVVYLDADTIVIKNIE-DLFK----C--RKF---------------CAN-LK--HSE-RLN 153 (548)
Q Consensus 107 ~KL~l~~-------L~eYdRVLYLDaDtLVl~dLD-eLF~----l--p~~---------------~Aa-v~--~~~-yFN 153 (548)
.|+.++. +.++|=+..+|+|+++.+++. |.+. . |.+ ++| ++ .++ |+-
T Consensus 107 ~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~~eGdfYy~ 186 (271)
T cd02515 107 RRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLHPWWYGKPRKQFPYERRPSSAAYIPEGEGDFYYH 186 (271)
T ss_pred HHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhhhhheecChhhhcCCCCCCCCcCCCCccccccCCCCCeEEe
Confidence 7776662 247999999999999999885 3321 1 100 011 11 222 332
Q ss_pred ceEEEEeCCHHHHHHHHHHHHhc------CCC--CCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccc
Q 008931 154 SGVMVVEPSAAVFNDMMTKVNTL------GSY--TGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYN 225 (548)
Q Consensus 154 SGVMLInps~~~f~~Ile~l~~~------~~~--~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN 225 (548)
+|+.= =+...+-++.+.|.+. +.+ .++|..=||.+|-.++ +...||+.|+
T Consensus 187 Ga~~G--G~~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~K--------------------p~KiLSPeY~ 244 (271)
T cd02515 187 GAVFG--GSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHK--------------------PTKVLSPEYL 244 (271)
T ss_pred eeecC--ccHHHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCC--------------------CCeecChhhc
Confidence 32210 1234444555554321 222 6899999999998753 2577999999
Q ss_pred ccc
Q 008931 226 ADV 228 (548)
Q Consensus 226 ~~~ 228 (548)
++.
T Consensus 245 w~e 247 (271)
T cd02515 245 WDD 247 (271)
T ss_pred CCc
Confidence 874
No 31
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=84.13 E-value=5.7 Score=43.44 Aligned_cols=119 Identities=13% Similarity=0.098 Sum_probs=60.9
Q ss_pred chhHHHHHHHHHHHhhcccccC-CCCCCCeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCE-EEEEcCCCCHHHHHHHH
Q 008931 3 LIPKLLTFVLIALLSIQSRAAI-GSQSTDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDM-VVLVSDGVSDYSKKLLK 79 (548)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dl-VvIvtd~ls~e~~~~Lk 79 (548)
.+|.++.++.+.-..-+.+-.. +.+.++..++.-++|++ ....-+++|+.+.+ +...+ +++++|+-++++.+.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~vsVIIP~yNe~--~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~ 99 (439)
T TIGR03111 22 IIPAVGGFIILLRKYRHKKRLKFIGKLPDITIIIPVYNSE--DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFC 99 (439)
T ss_pred HHHHHHHHHHHHHHhccccccCCcCCCCCEEEEEEeCCCh--HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHH
Confidence 3455555554222222222222 23346777777778865 55666888888764 22223 56777777777766655
Q ss_pred Hc---CCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEEEcCcccccC
Q 008931 80 AD---GWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIK 131 (548)
Q Consensus 80 ~~---g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLYLDaDtLVl~ 131 (548)
+. ...+ .+..++ ++.... ...=...+..+.|=|+.+|+|.++..
T Consensus 100 ~~~~~~~~v-~v~~~~-~~~Gka------~AlN~gl~~s~g~~v~~~DaD~~~~~ 146 (439)
T TIGR03111 100 RAQNEFPGL-SLRYMN-SDQGKA------KALNAAIYNSIGKYIIHIDSDGKLHK 146 (439)
T ss_pred HHHHhCCCe-EEEEeC-CCCCHH------HHHHHHHHHccCCEEEEECCCCCcCh
Confidence 42 2222 111122 221111 11111112234556999999999854
No 32
>PRK11204 N-glycosyltransferase; Provisional
Probab=82.49 E-value=7 Score=41.89 Aligned_cols=95 Identities=15% Similarity=0.196 Sum_probs=51.0
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecC-CCCCCCccchhhh
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLEN-PNQVRPKRFWGVY 106 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~-p~~~~~~r~~~sy 106 (548)
++.+++.-++|++ ....-++.|+.+.+ ++.+ +++++|+-++++.+.+++...+...+..+.. ++.... ...
T Consensus 54 p~vsViIp~yne~--~~i~~~l~sl~~q~yp~~e-iiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka----~al 126 (420)
T PRK11204 54 PGVSILVPCYNEG--ENVEETISHLLALRYPNYE-VIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKA----NAL 126 (420)
T ss_pred CCEEEEEecCCCH--HHHHHHHHHHHhCCCCCeE-EEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHH----HHH
Confidence 3566666667764 44556778877653 3333 4567777666666666554211112233332 221111 111
Q ss_pred hhhhcccccCccEEEEEcCcccccCC
Q 008931 107 TKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 107 ~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
. ...+..++|-++.+|+|.++-.|
T Consensus 127 n--~g~~~a~~d~i~~lDaD~~~~~d 150 (420)
T PRK11204 127 N--TGAAAARSEYLVCIDGDALLDPD 150 (420)
T ss_pred H--HHHHHcCCCEEEEECCCCCCChh
Confidence 1 11123578999999999988654
No 33
>PLN03181 glycosyltransferase; Provisional
Probab=82.05 E-value=5.2 Score=43.96 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=52.6
Q ss_pred hhhhhhccc-----ccCccEEEEEcCcccccCCchHhhcch--hhh------cc----c---CCCCcccceEEEEeCCHH
Q 008931 105 VYTKLKIFN-----MTNYKKVVYLDADTIVIKNIEDLFKCR--KFC------AN----L---KHSERLNSGVMVVEPSAA 164 (548)
Q Consensus 105 sy~KL~l~~-----L~eYdRVLYLDaDtLVl~dLDeLF~lp--~~~------Aa----v---~~~~yFNSGVMLInps~~ 164 (548)
.|.|+-+-+ .++.+-+-|||+|++|.+.= +++| .+- .. + +.-..+|+|+++|+.+.|
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~---~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqW 258 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMD---FKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQW 258 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecCC---CCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHH
Confidence 455554432 47899999999999999752 1222 110 00 0 122579999999999987
Q ss_pred HHHHHHHHH----------------Hh----cCCCCCChHHHHHHHhcC
Q 008931 165 VFNDMMTKV----------------NT----LGSYTGGDQGFLNSYYSD 193 (548)
Q Consensus 165 ~f~~Ile~l----------------~~----~~~~~~~DQDiLN~~f~d 193 (548)
..+=+-... .+ .....-.||..|-+++--
T Consensus 259 Sl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~ 307 (453)
T PLN03181 259 SLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYK 307 (453)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHh
Confidence 653222221 11 123455899999987644
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=80.09 E-value=8.9 Score=37.36 Aligned_cols=95 Identities=15% Similarity=0.224 Sum_probs=51.6
Q ss_pred CCCeEEEEEEeCcchHHHHHHHHHHHHHhCC-CCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCC-CCCCCccchh
Q 008931 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGS-NKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENP-NQVRPKRFWG 104 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s-~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p-~~~~~~r~~~ 104 (548)
.++.+++..++|+. ..+.-+++|+..... +.+. ++++.|+-++++.+.+++.... .+.++..+ +...
T Consensus 28 ~~~isVvip~~n~~--~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~g~------ 97 (251)
T cd06439 28 LPTVTIIIPAYNEE--AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPERRGK------ 97 (251)
T ss_pred CCEEEEEEecCCcH--HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCCCCh------
Confidence 34466665556654 455667888877542 2212 4566677666677777665322 22223222 1111
Q ss_pred hhhhhhcccccCccEEEEEcCcccccCC
Q 008931 105 VYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 105 sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
...+-...+..+.|=|+++|+|+++..+
T Consensus 98 ~~a~n~gi~~a~~d~i~~lD~D~~~~~~ 125 (251)
T cd06439 98 AAALNRALALATGEIVVFTDANALLDPD 125 (251)
T ss_pred HHHHHHHHHHcCCCEEEEEccccCcCHH
Confidence 1122222233345889999999999743
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=77.57 E-value=9.8 Score=36.53 Aligned_cols=93 Identities=14% Similarity=0.201 Sum_probs=49.4
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCC-CCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhh
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSN-KDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTK 108 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~-~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~K 108 (548)
...+..++|+. ..+.-++.|+.+.... .+. ++++.++-++++.+.+++...+...+.++..++.... ..+
T Consensus 2 ~sIiip~~n~~--~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~~------~a~ 73 (249)
T cd02525 2 VSIIIPVRNEE--KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQS------AGL 73 (249)
T ss_pred EEEEEEcCCch--hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCch------HHH
Confidence 34454455542 3456667888876432 232 4466666666666666665422222344433322111 112
Q ss_pred hhcccccCccEEEEEcCcccccC
Q 008931 109 LKIFNMTNYKKVVYLDADTIVIK 131 (548)
Q Consensus 109 L~l~~L~eYdRVLYLDaDtLVl~ 131 (548)
-...+..++|-++++|+|.++..
T Consensus 74 N~g~~~a~~d~v~~lD~D~~~~~ 96 (249)
T cd02525 74 NIGIRNSRGDIIIRVDAHAVYPK 96 (249)
T ss_pred HHHHHHhCCCEEEEECCCccCCH
Confidence 22223347899999999998743
No 36
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=74.95 E-value=22 Score=38.09 Aligned_cols=100 Identities=12% Similarity=0.097 Sum_probs=50.3
Q ss_pred CCCeEEEEEEeCcchHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcCCEE---EEeeeecCCCCCCCccch
Q 008931 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADGWIV---EKISLLENPNQVRPKRFW 103 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v---~~I~~I~~p~~~~~~r~~ 103 (548)
.++...|..+.|++ ....-++.||.+..-..++ +++++|+-++++.+.+++...+. ..+.++..++. +..+.
T Consensus 39 ~p~VSVIIpa~Ne~--~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~--~~g~~ 114 (384)
T TIGR03469 39 WPAVVAVVPARNEA--DVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPL--PPGWS 114 (384)
T ss_pred CCCEEEEEecCCcH--hHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCC--CCCCc
Confidence 44566666666654 5556788888876322122 45677766666666666532110 12333332111 11110
Q ss_pred -hhhhhhhcccc-----cCccEEEEEcCcccccC
Q 008931 104 -GVYTKLKIFNM-----TNYKKVVYLDADTIVIK 131 (548)
Q Consensus 104 -~sy~KL~l~~L-----~eYdRVLYLDaDtLVl~ 131 (548)
..+..-...+. .+.|-++++|+|+.+-.
T Consensus 115 Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p 148 (384)
T TIGR03469 115 GKLWAVSQGIAAARTLAPPADYLLLTDADIAHGP 148 (384)
T ss_pred chHHHHHHHHHHHhccCCCCCEEEEECCCCCCCh
Confidence 01110011111 23899999999999754
No 37
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=74.66 E-value=24 Score=31.23 Aligned_cols=82 Identities=18% Similarity=0.083 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEE
Q 008931 43 LLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVY 122 (548)
Q Consensus 43 L~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLY 122 (548)
.....-++.|+.+......-++++.++-.++..+.+++... .+..+..+.... ....+-...+..+.|-+++
T Consensus 9 ~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~~~~~~~~~~---~~~~~~~~~~~g-----~~~a~n~~~~~~~~~~i~~ 80 (166)
T cd04186 9 LEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFP---EVRLIRNGENLG-----FGAGNNQGIREAKGDYVLL 80 (166)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEEECCCCchHHHHHHHhCC---CeEEEecCCCcC-----hHHHhhHHHhhCCCCEEEE
Confidence 45566788888887543333556667666667777776543 222232221111 1112223333347899999
Q ss_pred EcCcccccCC
Q 008931 123 LDADTIVIKN 132 (548)
Q Consensus 123 LDaDtLVl~d 132 (548)
+|+|..+..+
T Consensus 81 ~D~D~~~~~~ 90 (166)
T cd04186 81 LNPDTVVEPG 90 (166)
T ss_pred ECCCcEECcc
Confidence 9999988654
No 38
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=72.83 E-value=27 Score=33.28 Aligned_cols=96 Identities=20% Similarity=0.119 Sum_probs=50.8
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhCCCCC--EEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKD--MVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYT 107 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~d--lVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~ 107 (548)
+..++.-++|++ .....-++.|+.......+ -++++.|+-++++.+.+++...+. .+..+..+...... .-.
T Consensus 2 ~vsviip~~n~~-~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~ 75 (234)
T cd06421 2 TVDVFIPTYNEP-LEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEY-GYRYLTRPDNRHAK----AGN 75 (234)
T ss_pred ceEEEEecCCCc-HHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhccc-CceEEEeCCCCCCc----HHH
Confidence 345555556643 2234567888886532221 245667776777777777764321 12222222111111 111
Q ss_pred hhhcccccCccEEEEEcCcccccC
Q 008931 108 KLKIFNMTNYKKVVYLDADTIVIK 131 (548)
Q Consensus 108 KL~l~~L~eYdRVLYLDaDtLVl~ 131 (548)
.-...+...+|-|+++|+|.++-.
T Consensus 76 ~n~~~~~a~~d~i~~lD~D~~~~~ 99 (234)
T cd06421 76 LNNALAHTTGDFVAILDADHVPTP 99 (234)
T ss_pred HHHHHHhCCCCEEEEEccccCcCc
Confidence 112223347899999999998854
No 39
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=72.57 E-value=21 Score=33.83 Aligned_cols=58 Identities=26% Similarity=0.241 Sum_probs=44.5
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHc--CCEEEEee
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKAD--GWIVEKIS 89 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~--g~~v~~I~ 89 (548)
+..+|+ ++++++...+.-++.|++++.++.++ +++.=|++++..+.|++. +.+++..+
T Consensus 61 ~vvfVS-a~S~~h~~~~~~~i~si~~~~P~~k~-ilY~LgL~~~~i~~L~~~~~n~evr~Fn 120 (142)
T PF07801_consen 61 DVVFVS-ATSDNHFNESMKSISSIRKFYPNHKI-ILYDLGLSEEQIKKLKKNFCNVEVRKFN 120 (142)
T ss_pred ccEEEE-EecchHHHHHHHHHHHHHHHCCCCcE-EEEeCCCCHHHHHHHHhcCCceEEEECC
Confidence 455554 45678888999999999999988884 688889999999999874 33444433
No 40
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=72.33 E-value=35 Score=36.34 Aligned_cols=95 Identities=15% Similarity=0.035 Sum_probs=46.3
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHc---CCEEEEeeeecCCCC-C-CCccc
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKAD---GWIVEKISLLENPNQ-V-RPKRF 102 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~---g~~v~~I~~I~~p~~-~-~~~r~ 102 (548)
++..++.-+.|++ ....-.+.|+.+.. ++.+++ ++.|+-++.+.+.+++. .... ++.++..+.. . ..+.
T Consensus 41 p~VSViiP~~nee--~~l~~~L~Sl~~q~Yp~~EIi-vvdd~s~D~t~~iv~~~~~~~p~~-~i~~v~~~~~~G~~~K~- 115 (373)
T TIGR03472 41 PPVSVLKPLHGDE--PELYENLASFCRQDYPGFQML-FGVQDPDDPALAVVRRLRADFPDA-DIDLVIDARRHGPNRKV- 115 (373)
T ss_pred CCeEEEEECCCCC--hhHHHHHHHHHhcCCCCeEEE-EEeCCCCCcHHHHHHHHHHhCCCC-ceEEEECCCCCCCChHH-
Confidence 3455554445643 23455778888764 444543 34555444444444332 2111 2233322211 1 1110
Q ss_pred hhhhhhhhcccccCccEEEEEcCcccccC
Q 008931 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIK 131 (548)
Q Consensus 103 ~~sy~KL~l~~L~eYdRVLYLDaDtLVl~ 131 (548)
.... .+.+..++|-++++|+|+++-.
T Consensus 116 -~~l~--~~~~~a~ge~i~~~DaD~~~~p 141 (373)
T TIGR03472 116 -SNLI--NMLPHARHDILVIADSDISVGP 141 (373)
T ss_pred -HHHH--HHHHhccCCEEEEECCCCCcCh
Confidence 1111 1223457899999999998854
No 41
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=70.13 E-value=11 Score=33.12 Aligned_cols=94 Identities=20% Similarity=0.374 Sum_probs=49.8
Q ss_pred EEEEeCc-chHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHc---CCEEEEeeeecCCCCCCCccchhhhhh
Q 008931 34 VTLLYGD-EFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKAD---GWIVEKISLLENPNQVRPKRFWGVYTK 108 (548)
Q Consensus 34 Vtl~tdd-~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~---g~~v~~I~~I~~p~~~~~~r~~~sy~K 108 (548)
|+.++|. +++. -++.|+++. +..+. ++++.++-++++.+.+++. ...+ ..+..+... . ..-.+
T Consensus 3 vip~~n~~~~l~---~~l~sl~~q-~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i---~~i~~~~n~---g--~~~~~ 70 (169)
T PF00535_consen 3 VIPTYNEAEYLE---RTLESLLKQ-TDPDFEIIVVDDGSTDETEEILEEYAESDPNI---RYIRNPENL---G--FSAAR 70 (169)
T ss_dssp EEEESS-TTTHH---HHHHHHHHH-SGCEEEEEEEECS-SSSHHHHHHHHHCCSTTE---EEEEHCCCS---H--HHHHH
T ss_pred EEEeeCCHHHHH---HHHHHHhhc-cCCCEEEEEecccccccccccccccccccccc---ccccccccc---c--ccccc
Confidence 3344554 5555 566777766 33333 4566666667777777775 2222 223222211 1 12233
Q ss_pred hhcccccCccEEEEEcCcccccCC-chHhhcc
Q 008931 109 LKIFNMTNYKKVVYLDADTIVIKN-IEDLFKC 139 (548)
Q Consensus 109 L~l~~L~eYdRVLYLDaDtLVl~d-LDeLF~l 139 (548)
-...+..+.+-++++|+|.++..+ ++++.+.
T Consensus 71 n~~~~~a~~~~i~~ld~D~~~~~~~l~~l~~~ 102 (169)
T PF00535_consen 71 NRGIKHAKGEYILFLDDDDIISPDWLEELVEA 102 (169)
T ss_dssp HHHHHH--SSEEEEEETTEEE-TTHHHHHHHH
T ss_pred cccccccceeEEEEeCCCceEcHHHHHHHHHH
Confidence 344444556689999999999988 5666554
No 42
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=69.07 E-value=20 Score=30.40 Aligned_cols=88 Identities=14% Similarity=0.095 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEE
Q 008931 43 LLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVY 122 (548)
Q Consensus 43 L~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLY 122 (548)
......++.|+.+......-+++++++-+++..+.+++.......+..+..+.... ....+-.+.+..+.|.+++
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~d~v~~ 83 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQG-----LAAARNAGLKAARGEYILF 83 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCC-----hHHHHHHHHHHhcCCEEEE
Confidence 45667788888887532223456666666666666655432100111111111000 0111222222237899999
Q ss_pred EcCcccccCCchH
Q 008931 123 LDADTIVIKNIED 135 (548)
Q Consensus 123 LDaDtLVl~dLDe 135 (548)
+|+|.++..+.-+
T Consensus 84 ~d~D~~~~~~~~~ 96 (156)
T cd00761 84 LDADDLLLPDWLE 96 (156)
T ss_pred ECCCCccCccHHH
Confidence 9999998776433
No 43
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=68.49 E-value=18 Score=38.80 Aligned_cols=170 Identities=12% Similarity=0.137 Sum_probs=82.3
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEE-EEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccch-hhh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMV-VLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFW-GVY 106 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlV-vIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~-~sy 106 (548)
+.+.++++++ .|.....-.++|..++- ..++.. ++.+|+.++--.-.|.. +- .+.++..+ +..+|. .+.
T Consensus 100 tIGL~vfA~G-kY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~l~~-~r---~~~V~~v~---~~~~Wqd~sm 171 (337)
T PF03414_consen 100 TIGLTVFATG-KYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIELGP-GR---RLKVFEVQ---EEKRWQDISM 171 (337)
T ss_dssp EEEEEEEE-C-CHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS------T-TE---EEEEEE-S---GGSSHHHHHH
T ss_pred eEEEEEEecc-cHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccccCC-Cc---eeEEEEec---ccCCCccchh
Confidence 3455555554 68888888888888874 455544 36676532200001111 11 22222221 123454 466
Q ss_pred hhhhccc-------ccCccEEEEEcCcccccCCchH-hh----cc--hhh---------------hcc-cC--CC-Cccc
Q 008931 107 TKLKIFN-------MTNYKKVVYLDADTIVIKNIED-LF----KC--RKF---------------CAN-LK--HS-ERLN 153 (548)
Q Consensus 107 ~KL~l~~-------L~eYdRVLYLDaDtLVl~dLDe-LF----~l--p~~---------------~Aa-v~--~~-~yFN 153 (548)
.|+.++. +.++|=+..+|+|+++.+++.. .+ .. +.+ ++| ++ .+ -|+-
T Consensus 172 ~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~Lg~lva~LHp~~y~~~~~~FpYERrp~S~AyIp~~eGDfYY~ 251 (337)
T PF03414_consen 172 MRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEILGDLVATLHPWFYFKPRESFPYERRPKSQAYIPYGEGDFYYH 251 (337)
T ss_dssp HHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG-SSEEEEESTTTTTSTGGGS--B-STTSTTB--TT--S--EE
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHHHHHHHHhCHHHHCCChhhCccccCccccccccCCCCCeEEe
Confidence 6776654 2469999999999999998752 22 11 100 011 21 12 2444
Q ss_pred ceEEEEeCCHHHHHHHHHHH--------HhcCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccc
Q 008931 154 SGVMVVEPSAAVFNDMMTKV--------NTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYN 225 (548)
Q Consensus 154 SGVMLInps~~~f~~Ile~l--------~~~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN 225 (548)
+|+.== .....-++.+.| .+.-.-.++|..=||.+|-.++ ....|++.|+
T Consensus 252 ga~fGG--t~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~K--------------------PtKvLSPEY~ 309 (337)
T PF03414_consen 252 GAFFGG--TVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHK--------------------PTKVLSPEYC 309 (337)
T ss_dssp CCEEEE--CHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS----------------------SEEE-GGGS
T ss_pred ceecCC--cHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCC--------------------CceecCHHHc
Confidence 443321 223333444433 2223346899999999997642 2478999999
Q ss_pred cccc
Q 008931 226 ADVG 229 (548)
Q Consensus 226 ~~~~ 229 (548)
++..
T Consensus 310 Wd~~ 313 (337)
T PF03414_consen 310 WDER 313 (337)
T ss_dssp BSHH
T ss_pred cCcc
Confidence 8753
No 44
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=65.63 E-value=23 Score=38.78 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=49.6
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhh
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYT 107 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~ 107 (548)
++.+.+.-++|++ ....-+++|+.+.+ ++.+ +++++|+-++++.+.+++...+...+.++.... .+.+. ....
T Consensus 75 p~vsViIP~yNE~--~~i~~~l~sll~q~yp~~e-IivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~-n~Gka--~AlN 148 (444)
T PRK14583 75 PLVSILVPCFNEG--LNARETIHAALAQTYTNIE-VIAINDGSSDDTAQVLDALLAEDPRLRVIHLAH-NQGKA--IALR 148 (444)
T ss_pred CcEEEEEEeCCCH--HHHHHHHHHHHcCCCCCeE-EEEEECCCCccHHHHHHHHHHhCCCEEEEEeCC-CCCHH--HHHH
Confidence 4466776667765 33456678877653 3344 456666666666665554311111122222111 11110 0100
Q ss_pred hhhcccccCccEEEEEcCcccccCC
Q 008931 108 KLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 108 KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
...+..++|-++.+|+|.+.-.|
T Consensus 149 --~gl~~a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 149 --MGAAAARSEYLVCIDGDALLDKN 171 (444)
T ss_pred --HHHHhCCCCEEEEECCCCCcCHH
Confidence 11122578999999999998654
No 45
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=65.34 E-value=31 Score=32.37 Aligned_cols=85 Identities=14% Similarity=0.163 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCC-CCccchhhhhhhhcccccCccEEEE
Q 008931 44 LGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQV-RPKRFWGVYTKLKIFNMTNYKKVVY 122 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~-~~~r~~~sy~KL~l~~L~eYdRVLY 122 (548)
....-++.||.+......-++++.++-++++.+.+++..... ++..+..+... ....+...+. ... ..++|-+++
T Consensus 10 ~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~-~i~~~~~~~n~g~~~~~n~~~~-~a~--~~~~d~v~~ 85 (202)
T cd04185 10 DLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGDLD-NIVYLRLPENLGGAGGFYEGVR-RAY--ELGYDWIWL 85 (202)
T ss_pred HHHHHHHHHHHhccCCCceEEEEECCCCcchHHHHHHhcCCC-ceEEEECccccchhhHHHHHHH-HHh--ccCCCEEEE
Confidence 335567788876532222256777776667777777764332 13333322211 1111111111 111 246899999
Q ss_pred EcCcccccCC
Q 008931 123 LDADTIVIKN 132 (548)
Q Consensus 123 LDaDtLVl~d 132 (548)
+|+|.++..+
T Consensus 86 ld~D~~~~~~ 95 (202)
T cd04185 86 MDDDAIPDPD 95 (202)
T ss_pred eCCCCCcChH
Confidence 9999999754
No 46
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=63.59 E-value=30 Score=30.12 Aligned_cols=83 Identities=20% Similarity=0.163 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEE-EEeeeec-CCCCCCCccchhhhhhhhcccccCccEEE
Q 008931 44 LGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIV-EKISLLE-NPNQVRPKRFWGVYTKLKIFNMTNYKKVV 121 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v-~~I~~I~-~p~~~~~~r~~~sy~KL~l~~L~eYdRVL 121 (548)
....-++.|+++......-++++.++-++++.+.+++..... ..+..+. ..+.... -.+-...+..+.|-|+
T Consensus 10 ~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~------~~~n~~~~~~~~~~i~ 83 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKA------GALNAGLRHAKGDIVV 83 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCch------HHHHHHHHhcCCCEEE
Confidence 566677889887653222245666666666666666643211 0111111 1111111 1111222223788899
Q ss_pred EEcCcccccCC
Q 008931 122 YLDADTIVIKN 132 (548)
Q Consensus 122 YLDaDtLVl~d 132 (548)
.+|+|.++..+
T Consensus 84 ~~D~D~~~~~~ 94 (180)
T cd06423 84 VLDADTILEPD 94 (180)
T ss_pred EECCCCCcChH
Confidence 99999988654
No 47
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=60.17 E-value=34 Score=32.28 Aligned_cols=85 Identities=20% Similarity=0.154 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhCCCCC-E-EEEEcCCCCHHHHHHHH-HcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEE
Q 008931 44 LGVRVLGKSIRDTGSNKD-M-VVLVSDGVSDYSKKLLK-ADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKV 120 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s~~d-l-VvIvtd~ls~e~~~~Lk-~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRV 120 (548)
....-++.||.+.....+ + ++++.|+-++.+.+.++ ........+..+..+..... .....+-...+....|-|
T Consensus 10 ~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~~~---g~~~a~n~g~~~~~~d~i 86 (229)
T cd04192 10 ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVSIS---GKKNALTTAIKAAKGDWI 86 (229)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCcccc---hhHHHHHHHHHHhcCCEE
Confidence 445667888877643321 2 44666665555555554 21111112223332210000 011111222233568999
Q ss_pred EEEcCcccccC
Q 008931 121 VYLDADTIVIK 131 (548)
Q Consensus 121 LYLDaDtLVl~ 131 (548)
+++|+|.++..
T Consensus 87 ~~~D~D~~~~~ 97 (229)
T cd04192 87 VTTDADCVVPS 97 (229)
T ss_pred EEECCCcccCH
Confidence 99999998854
No 48
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=55.73 E-value=66 Score=29.92 Aligned_cols=89 Identities=20% Similarity=0.119 Sum_probs=44.8
Q ss_pred eCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCC-CHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccC
Q 008931 38 YGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGV-SDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTN 116 (548)
Q Consensus 38 tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~l-s~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~e 116 (548)
+|.+=...+.-++.|+........-++++.|+- ++.+.+.+++...+. ++..+..+.... ....+=...+..+
T Consensus 7 ~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~-~i~~i~~~~n~G-----~~~a~N~g~~~a~ 80 (201)
T cd04195 7 YIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKL-PLKVVPLEKNRG-----LGKALNEGLKHCT 80 (201)
T ss_pred cccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCchhHHHHHHHHHhcC-CeEEEEcCcccc-----HHHHHHHHHHhcC
Confidence 444323455577888887643322345666665 444555555431111 123333222111 0122223333456
Q ss_pred ccEEEEEcCcccccCC
Q 008931 117 YKKVVYLDADTIVIKN 132 (548)
Q Consensus 117 YdRVLYLDaDtLVl~d 132 (548)
.|=|+++|+|.+...+
T Consensus 81 gd~i~~lD~Dd~~~~~ 96 (201)
T cd04195 81 YDWVARMDTDDISLPD 96 (201)
T ss_pred CCEEEEeCCccccCcH
Confidence 7889999999887643
No 49
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=54.94 E-value=6.5 Score=34.19 Aligned_cols=87 Identities=10% Similarity=0.115 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCCEEEEEcCCCC-----HHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhc-ccccCccEE
Q 008931 47 RVLGKSIRDTGSNKDMVVLVSDGVS-----DYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKI-FNMTNYKKV 120 (548)
Q Consensus 47 ~VLi~SL~~~~s~~dlVvIvtd~ls-----~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l-~~L~eYdRV 120 (548)
.-.++|..+++++..+++ .+++.. ..+.+.+.+....+.+...-..+......-..+-+.|+.+ +... =
T Consensus 5 ~~~i~s~~~~nP~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sD~~R~~~L~~~G----G 79 (103)
T PF04488_consen 5 QCSIESWARHNPDYEYIL-WTDESDNVRVKRIDIEFLFEKTPWFLELYNKWEPGRYPNYAHKSDLLRYLVLYKYG----G 79 (103)
T ss_pred HHHHHHHHHHCCCCEEEE-EECCCcchhhhHHHHHHHHhCChHHHHHHhhhhcccccchHHHHHHHHHHHHHHcC----c
Confidence 346789999988877654 444433 2233334332110000000000000000001234566544 3222 3
Q ss_pred EEEcCcccccCCc-hHhhc
Q 008931 121 VYLDADTIVIKNI-EDLFK 138 (548)
Q Consensus 121 LYLDaDtLVl~dL-DeLF~ 138 (548)
+|+|.|+++++++ +++..
T Consensus 80 iY~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 80 IYLDLDVICLRPLDDPWLP 98 (103)
T ss_pred EEEeCccccCcchhhhhhc
Confidence 8999999999999 77754
No 50
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=53.01 E-value=89 Score=29.82 Aligned_cols=91 Identities=19% Similarity=0.182 Sum_probs=48.8
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhc
Q 008931 32 AYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKI 111 (548)
Q Consensus 32 AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l 111 (548)
..|..++|.. .....-+++|+.... ..+ ++++.++-+++..+.+++.... ..+..+..++.... ... -..
T Consensus 3 sVvIp~~ne~-~~~l~~~l~sl~~q~-~~e-iivvdd~s~d~~~~~l~~~~~~-~~~~v~~~~~~g~~----~a~--n~g 72 (235)
T cd06434 3 TVIIPVYDED-PDVFRECLRSILRQK-PLE-IIVVTDGDDEPYLSILSQTVKY-GGIFVITVPHPGKR----RAL--AEG 72 (235)
T ss_pred EEEEeecCCC-hHHHHHHHHHHHhCC-CCE-EEEEeCCCChHHHHHHHhhccC-CcEEEEecCCCChH----HHH--HHH
Confidence 3444455542 355566788888765 444 4566677677766666332111 11122222221111 111 112
Q ss_pred ccccCccEEEEEcCcccccCC
Q 008931 112 FNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 112 ~~L~eYdRVLYLDaDtLVl~d 132 (548)
.+..+.|-|+++|+|+.+..+
T Consensus 73 ~~~a~~d~v~~lD~D~~~~~~ 93 (235)
T cd06434 73 IRHVTTDIVVLLDSDTVWPPN 93 (235)
T ss_pred HHHhCCCEEEEECCCceeChh
Confidence 233478999999999999876
No 51
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=51.86 E-value=88 Score=30.52 Aligned_cols=95 Identities=14% Similarity=0.078 Sum_probs=49.2
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCC-CCE-EEEEcCCCCHHHHHHHHHcCC-EEEEeeeecCCCCCCCccchhhhh
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSN-KDM-VVLVSDGVSDYSKKLLKADGW-IVEKISLLENPNQVRPKRFWGVYT 107 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~-~dl-VvIvtd~ls~e~~~~Lk~~g~-~v~~I~~I~~p~~~~~~r~~~sy~ 107 (548)
..++.-++|+. ....-++.|+....-. .++ ++++.|+-++++.+.+++... ....+..+.... .... ..+..
T Consensus 3 vsIiIp~~Ne~--~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~-~~G~--~~a~n 77 (241)
T cd06427 3 YTILVPLYKEA--EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQ-PRTK--PKACN 77 (241)
T ss_pred EEEEEecCCcH--HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCC-CCch--HHHHH
Confidence 44555556653 4456778888775322 123 335566667777787777532 111222222111 1110 01111
Q ss_pred hhhcccccCccEEEEEcCcccccCC
Q 008931 108 KLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 108 KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
...+..+.|=|+++|+|+++-.+
T Consensus 78 --~g~~~a~gd~i~~~DaD~~~~~~ 100 (241)
T cd06427 78 --YALAFARGEYVVIYDAEDAPDPD 100 (241)
T ss_pred --HHHHhcCCCEEEEEcCCCCCChH
Confidence 22233567889999999997654
No 52
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=51.32 E-value=55 Score=29.86 Aligned_cols=90 Identities=14% Similarity=0.214 Sum_probs=44.8
Q ss_pred EEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHcCC--EEEEeeeecCCCCCCCccchhhhhhhhc
Q 008931 35 TLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGW--IVEKISLLENPNQVRPKRFWGVYTKLKI 111 (548)
Q Consensus 35 tl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~g~--~v~~I~~I~~p~~~~~~r~~~sy~KL~l 111 (548)
..++|.. ....-++.|+.... .+.+ ++++.|+-++.+.+.+++... ....+.....+.. +.....+=..
T Consensus 3 ip~~n~~--~~l~~~l~sl~~q~~~~~e-iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~n~g 74 (182)
T cd06420 3 ITTYNRP--EALELVLKSVLNQSILPFE-VIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEG-----FRKAKIRNKA 74 (182)
T ss_pred EeecCCh--HHHHHHHHHHHhccCCCCE-EEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcc-----hhHHHHHHHH
Confidence 3445532 33456778887764 2233 446666666656665655321 1111111221111 1111122223
Q ss_pred ccccCccEEEEEcCcccccCC
Q 008931 112 FNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 112 ~~L~eYdRVLYLDaDtLVl~d 132 (548)
.+..+.|-|++||+|.++..+
T Consensus 75 ~~~a~g~~i~~lD~D~~~~~~ 95 (182)
T cd06420 75 IAAAKGDYLIFIDGDCIPHPD 95 (182)
T ss_pred HHHhcCCEEEEEcCCcccCHH
Confidence 344567899999999988654
No 53
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=50.76 E-value=80 Score=28.75 Aligned_cols=85 Identities=11% Similarity=0.120 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhCC-CCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEE
Q 008931 44 LGVRVLGKSIRDTGS-NKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVY 122 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s-~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLY 122 (548)
..+.-++.|+.+... +.+ ++++.++-++++.+.+++....+..+ +..++... ...+-...+..+.|=|++
T Consensus 11 ~~l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~~~~~~~~~~~~~--~~~~~~g~------~~a~n~~~~~a~~~~v~~ 81 (202)
T cd06433 11 ETLEETIDSVLSQTYPNIE-YIVIDGGSTDGTVDIIKKYEDKITYW--ISEPDKGI------YDAMNKGIALATGDIIGF 81 (202)
T ss_pred HHHHHHHHHHHhCCCCCce-EEEEeCCCCccHHHHHHHhHhhcEEE--EecCCcCH------HHHHHHHHHHcCCCEEEE
Confidence 455667888876532 223 44666666666777777654321111 22222111 111222233345688999
Q ss_pred EcCcccccCC-chHhh
Q 008931 123 LDADTIVIKN-IEDLF 137 (548)
Q Consensus 123 LDaDtLVl~d-LDeLF 137 (548)
+|+|..+..+ +.++.
T Consensus 82 ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 82 LNSDDTLLPGALLAVV 97 (202)
T ss_pred eCCCcccCchHHHHHH
Confidence 9999988764 44443
No 54
>PRK10063 putative glycosyl transferase; Provisional
Probab=49.52 E-value=73 Score=32.03 Aligned_cols=94 Identities=15% Similarity=0.264 Sum_probs=50.0
Q ss_pred CeEEEEEEeCc-chHHHHHHHHHHHHHh--CCCCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhh
Q 008931 30 DQAYVTLLYGD-EFLLGVRVLGKSIRDT--GSNKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGV 105 (548)
Q Consensus 30 r~AyVtl~tdd-~YL~~a~VLi~SL~~~--~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~s 105 (548)
+..+|+.++|. +++ .-++.|+... .+..++ +++++|+-++.+.+.+++..... ++.++..++.. ...+
T Consensus 2 ~vSVIi~~yN~~~~l---~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~~~G----~~~A 73 (248)
T PRK10063 2 LLSVITVAFRNLEGI---VKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF-NLRFVSEPDNG----IYDA 73 (248)
T ss_pred eEEEEEEeCCCHHHH---HHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC-CEEEEECCCCC----HHHH
Confidence 34566666664 444 4455666532 122344 45677777777888887753211 23334333321 1111
Q ss_pred hhhhhcccccCccEEEEEcCcccccCCc
Q 008931 106 YTKLKIFNMTNYKKVVYLDADTIVIKNI 133 (548)
Q Consensus 106 y~KL~l~~L~eYdRVLYLDaDtLVl~dL 133 (548)
..+ ..+....|=|++||+|.+...+.
T Consensus 74 ~N~--Gi~~a~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 74 MNK--GIAMAQGRFALFLNSGDIFHQDA 99 (248)
T ss_pred HHH--HHHHcCCCEEEEEeCCcccCcCH
Confidence 111 11223568899999999887764
No 55
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=49.50 E-value=89 Score=37.72 Aligned_cols=95 Identities=12% Similarity=0.170 Sum_probs=49.9
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHh-CCCCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhh
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDT-GSNKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVY 106 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~-~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy 106 (548)
++..++.-++|++-- -..-.+.++... -++.++ +++++|+-+++..+..++.++++ +..++....+. ...
T Consensus 260 P~VsViIPtYNE~~~-vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~~v~y-----I~R~~n~~gKA--GnL 331 (852)
T PRK11498 260 PTVDIFVPTYNEDLN-VVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEVGVKY-----IARPTHEHAKA--GNI 331 (852)
T ss_pred CcEEEEEecCCCcHH-HHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHCCcEE-----EEeCCCCcchH--HHH
Confidence 456666666776421 112234454433 233233 45777877777777777766543 22332211110 010
Q ss_pred hhhhcccccCccEEEEEcCcccccCCc
Q 008931 107 TKLKIFNMTNYKKVVYLDADTIVIKNI 133 (548)
Q Consensus 107 ~KL~l~~L~eYdRVLYLDaDtLVl~dL 133 (548)
. ...+..+.|=|+.+|+|.++..|.
T Consensus 332 N--~aL~~a~GEyIavlDAD~ip~pdf 356 (852)
T PRK11498 332 N--NALKYAKGEFVAIFDCDHVPTRSF 356 (852)
T ss_pred H--HHHHhCCCCEEEEECCCCCCChHH
Confidence 0 011224679999999999987654
No 56
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=49.12 E-value=73 Score=29.63 Aligned_cols=97 Identities=20% Similarity=0.213 Sum_probs=48.5
Q ss_pred EEEEeCcchHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcCCEE-EEeeeecCCCCCCCccchhhhhhhhc
Q 008931 34 VTLLYGDEFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADGWIV-EKISLLENPNQVRPKRFWGVYTKLKI 111 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v-~~I~~I~~p~~~~~~r~~~sy~KL~l 111 (548)
+..++|.. ....-++.|+.+.... ++ ++++.|+-++++.+.+++...+. ..+..+...... . ....+.+ .
T Consensus 3 vIp~yn~~--~~l~~~l~sl~~q~~~-~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~-G--~~~~~n~--g 74 (214)
T cd04196 3 LMATYNGE--KYLREQLDSILAQTYK-NDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNL-G--VARNFES--L 74 (214)
T ss_pred EEEecCcH--HHHHHHHHHHHhCcCC-CeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCc-c--HHHHHHH--H
Confidence 33445543 3345677888776322 33 44566666666666666542221 112222222110 1 0111111 1
Q ss_pred ccccCccEEEEEcCcccccCC-chHhhc
Q 008931 112 FNMTNYKKVVYLDADTIVIKN-IEDLFK 138 (548)
Q Consensus 112 ~~L~eYdRVLYLDaDtLVl~d-LDeLF~ 138 (548)
....+.|=|+++|+|.+...+ +.++.+
T Consensus 75 ~~~~~g~~v~~ld~Dd~~~~~~l~~~~~ 102 (214)
T cd04196 75 LQAADGDYVFFCDQDDIWLPDKLERLLK 102 (214)
T ss_pred HHhCCCCEEEEECCCcccChhHHHHHHH
Confidence 334578889999999877654 444444
No 57
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=48.16 E-value=1.2e+02 Score=32.60 Aligned_cols=84 Identities=29% Similarity=0.277 Sum_probs=49.1
Q ss_pred CcchhHHHHHHHHHHHhhcccccCCCCCCCeEEEEEEeCcchHHHHHHHHHHHHHhC-----C---------------CC
Q 008931 1 MKLIPKLLTFVLIALLSIQSRAAIGSQSTDQAYVTLLYGDEFLLGVRVLGKSIRDTG-----S---------------NK 60 (548)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-----s---------------~~ 60 (548)
|+-..+||.+++++++.. ...++...... +.++.+|+++..+.++=.+=..|. + +.
T Consensus 1 Mrr~l~lll~~~l~l~s~---~av~A~~~~~~-~VIlvsDn~aD~~lA~~iaellNA~Vlttpwg~ynes~~~eI~~lnp 76 (337)
T COG2247 1 MRRLLMLLLASLLALSSP---PAVSAQSQNTT-VVILVSDNEADLLLALPIAELLNAPVLTTPWGIYNESVLDEIIELNP 76 (337)
T ss_pred CccHHHHHHHHHHHHhcc---hhhhhhhcCce-EEEEecchHHHHHHhhHHHHHhCCeeEecCcccccHHHHHHHHhhCC
Confidence 666677777777776611 11111111211 556678888877765544333331 1 35
Q ss_pred CEEEEEc--CCCCHHHHHHHHHcCCEEEEe
Q 008931 61 DMVVLVS--DGVSDYSKKLLKADGWIVEKI 88 (548)
Q Consensus 61 dlVvIvt--d~ls~e~~~~Lk~~g~~v~~I 88 (548)
|.|+|+. ..+|+...+.|+..|+++.++
T Consensus 77 d~VLIIGGp~AVs~~yE~~Lks~GitV~Ri 106 (337)
T COG2247 77 DLVLIIGGPIAVSPNYENALKSLGITVKRI 106 (337)
T ss_pred ceEEEECCCCcCChhHHHHHHhCCcEEEEe
Confidence 7777773 348888888888888887654
No 58
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=47.72 E-value=81 Score=29.26 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=46.1
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHH-HHHHHcCCEEEEeeeecCCCCCCCccchhhhhhh
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSK-KLLKADGWIVEKISLLENPNQVRPKRFWGVYTKL 109 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~-~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL 109 (548)
..++..++|+. +..+..+++||........-++++.++-+++.. +.++....+-..+..+..+... .+ ...+-
T Consensus 3 vsiii~~~n~~-~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~---g~--~~a~n 76 (202)
T cd04184 3 ISIVMPVYNTP-EKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENG---GI--SAATN 76 (202)
T ss_pred EEEEEecccCc-HHHHHHHHHHHHhCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCC---CH--HHHHH
Confidence 44555556654 567778889998764222124566665544332 2233211010011222111110 11 11222
Q ss_pred hcccccCccEEEEEcCcccccCC
Q 008931 110 KIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 110 ~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
...+....|=++.+|+|..+..+
T Consensus 77 ~g~~~a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 77 SALELATGEFVALLDHDDELAPH 99 (202)
T ss_pred HHHHhhcCCEEEEECCCCcCChH
Confidence 22333456889999999987553
No 59
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=46.90 E-value=13 Score=38.32 Aligned_cols=47 Identities=28% Similarity=0.492 Sum_probs=36.0
Q ss_pred ccEEEEEcCcccccCCchHhhcchhhhccc---CCCCcccceEEEEeCCH
Q 008931 117 YKKVVYLDADTIVIKNIEDLFKCRKFCANL---KHSERLNSGVMVVEPSA 163 (548)
Q Consensus 117 YdRVLYLDaDtLVl~dLDeLF~lp~~~Aav---~~~~yFNSGVMLInps~ 163 (548)
-+-+||||+||++.+.+--|+.-|.++.-+ .+...+-.|.+++|.+.
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 567999999999999999888766655433 34455667888888874
No 60
>PRK15384 type III secretion system protein; Provisional
Probab=46.36 E-value=13 Score=38.31 Aligned_cols=47 Identities=17% Similarity=0.438 Sum_probs=35.8
Q ss_pred ccEEEEEcCcccccCCchHhhcchhhhccc---CCCCcccceEEEEeCCH
Q 008931 117 YKKVVYLDADTIVIKNIEDLFKCRKFCANL---KHSERLNSGVMVVEPSA 163 (548)
Q Consensus 117 YdRVLYLDaDtLVl~dLDeLF~lp~~~Aav---~~~~yFNSGVMLInps~ 163 (548)
-.-+||||+||++.+.+--|+.-|.++.-+ .....+-.|.+++|.+.
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred CCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 567999999999999999888766655433 33445667888888874
No 61
>PRK15383 type III secretion system protein; Provisional
Probab=46.29 E-value=13 Score=38.28 Aligned_cols=47 Identities=21% Similarity=0.402 Sum_probs=35.8
Q ss_pred ccEEEEEcCcccccCCchHhhcchhhhccc---CCCCcccceEEEEeCCH
Q 008931 117 YKKVVYLDADTIVIKNIEDLFKCRKFCANL---KHSERLNSGVMVVEPSA 163 (548)
Q Consensus 117 YdRVLYLDaDtLVl~dLDeLF~lp~~~Aav---~~~~yFNSGVMLInps~ 163 (548)
-.-+||||+|||+.+.+--|+.-|.++.-+ .....+-.|.+++|.+.
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 567999999999999999888766655433 33445667888888874
No 62
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=45.57 E-value=1.1e+02 Score=26.50 Aligned_cols=93 Identities=17% Similarity=0.162 Sum_probs=50.4
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhCCCC-CEEEEEcCCCCHHHHHHHHHcCCEEEEe-eeecCCCCCCCccchhhhh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTGSNK-DMVVLVSDGVSDYSKKLLKADGWIVEKI-SLLENPNQVRPKRFWGVYT 107 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~-dlVvIvtd~ls~e~~~~Lk~~g~~v~~I-~~I~~p~~~~~~r~~~sy~ 107 (548)
+...+.-.+|.. .....++.|+.+..... + ++++.|+-++++.+.+++.......+ ......+.. ....
T Consensus 4 ~~siiip~~n~~--~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g------~~~~ 74 (291)
T COG0463 4 KVSVVIPTYNEE--EYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGG------LGAA 74 (291)
T ss_pred cEEEEEeccchh--hhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCC------hHHH
Confidence 344444444543 67777888988875333 4 67788877777777776654332111 111111111 1122
Q ss_pred hhhcccccCccEEEEEcCcccccCC
Q 008931 108 KLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 108 KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
+-.......-|-|+++|+|.+ ..+
T Consensus 75 ~~~~~~~~~~~~~~~~d~d~~-~~~ 98 (291)
T COG0463 75 RNAGLEYARGDYIVFLDADDQ-HPP 98 (291)
T ss_pred HHhhHHhccCCEEEEEccCCC-CCH
Confidence 222222222288999999999 654
No 63
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=44.34 E-value=1.2e+02 Score=35.63 Aligned_cols=101 Identities=20% Similarity=0.285 Sum_probs=52.5
Q ss_pred CCCCCeEEEEEEeCcch---HHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHH-------HHHHHc-C--CEEEEeeee
Q 008931 26 SQSTDQAYVTLLYGDEF---LLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSK-------KLLKAD-G--WIVEKISLL 91 (548)
Q Consensus 26 ~~~sr~AyVtl~tdd~Y---L~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~-------~~Lk~~-g--~~v~~I~~I 91 (548)
++.++.+++.=++|++- ...+..+..|+.+.+...++ +++++|+-+++.. +.|++. + .++ ...
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i---~yr 197 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRI---FYR 197 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcE---EEE
Confidence 34567887777788653 24566778898876543233 3566766554421 233332 1 122 112
Q ss_pred cCCCCCCCccc-hhhhhhhhcccccCccEEEEEcCcccccCC
Q 008931 92 ENPNQVRPKRF-WGVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 92 ~~p~~~~~~r~-~~sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
...++...+.- ...+.+. +. .+||-++.+|+|++.-+|
T Consensus 198 ~R~~n~~~KaGNl~~~~~~--~~-~~~eyivvLDADs~m~~d 236 (691)
T PRK05454 198 RRRRNVGRKAGNIADFCRR--WG-GAYDYMVVLDADSLMSGD 236 (691)
T ss_pred ECCcCCCccHHHHHHHHHh--cC-CCcCEEEEEcCCCCCCHH
Confidence 22111111100 0111211 11 579999999999999875
No 64
>PRK10073 putative glycosyl transferase; Provisional
Probab=43.95 E-value=86 Score=32.98 Aligned_cols=94 Identities=20% Similarity=0.240 Sum_probs=50.3
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTK 108 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~K 108 (548)
...+|.-++|.. ....-++.|+....- .++ ++++.|+-++++.+.+++...+...|.++..++... +..|
T Consensus 7 ~vSVIIP~yN~~--~~L~~~l~Sl~~Qt~-~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~n~G~------~~ar 77 (328)
T PRK10073 7 KLSIIIPLYNAG--KDFRAFMESLIAQTW-TALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQANAGV------SVAR 77 (328)
T ss_pred eEEEEEeccCCH--HHHHHHHHHHHhCCC-CCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECCCCCh------HHHH
Confidence 456666666643 334456788886632 233 456777777666666665321111233343333211 1122
Q ss_pred hhcccccCccEEEEEcCcccccCC
Q 008931 109 LKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 109 L~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
=...+...-|=|+++|+|..+..+
T Consensus 78 N~gl~~a~g~yi~flD~DD~~~p~ 101 (328)
T PRK10073 78 NTGLAVATGKYVAFPDADDVVYPT 101 (328)
T ss_pred HHHHHhCCCCEEEEECCCCccChh
Confidence 222233455779999999987654
No 65
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=43.40 E-value=62 Score=30.51 Aligned_cols=95 Identities=15% Similarity=0.071 Sum_probs=45.8
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHcCCEE--EEeeeecCCCCCCCccchhhhh
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIV--EKISLLENPNQVRPKRFWGVYT 107 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~g~~v--~~I~~I~~p~~~~~~r~~~sy~ 107 (548)
..++.-++|+. ....-++.|+.... ++.++ +++.|+-++++.+.+++..... ..+..+..+...... .....
T Consensus 3 vsviip~~n~~--~~l~~~L~sl~~q~~~~~ei-ivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~ 77 (196)
T cd02520 3 VSILKPLCGVD--PNLYENLESFFQQDYPKYEI-LFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGIN--PKVNN 77 (196)
T ss_pred eEEEEecCCCC--ccHHHHHHHHHhccCCCeEE-EEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCC--HhHHH
Confidence 45555556653 23456788887653 33443 4566666666666565431110 012222211110000 00111
Q ss_pred hhhcccccCccEEEEEcCccccc
Q 008931 108 KLKIFNMTNYKKVVYLDADTIVI 130 (548)
Q Consensus 108 KL~l~~L~eYdRVLYLDaDtLVl 130 (548)
.-...+..++|=++++|+|+.+-
T Consensus 78 ~n~g~~~a~~d~i~~~D~D~~~~ 100 (196)
T cd02520 78 LIKGYEEARYDILVISDSDISVP 100 (196)
T ss_pred HHHHHHhCCCCEEEEECCCceEC
Confidence 11223345689999999998764
No 66
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=42.76 E-value=44 Score=33.79 Aligned_cols=86 Identities=17% Similarity=0.303 Sum_probs=55.8
Q ss_pred ccCccEEEEEcCcccccCCchHhhcc-h-hh----hcccCCCCcccceEEEEeCCHHHHHHHHHHHH-h---cCCCCCCh
Q 008931 114 MTNYKKVVYLDADTIVIKNIEDLFKC-R-KF----CANLKHSERLNSGVMVVEPSAAVFNDMMTKVN-T---LGSYTGGD 183 (548)
Q Consensus 114 L~eYdRVLYLDaDtLVl~dLDeLF~l-p-~~----~Aav~~~~yFNSGVMLInps~~~f~~Ile~l~-~---~~~~~~~D 183 (548)
|+++|-|++||+|+-|+++=.-+-+. + .+ .... ...-+.+|--+++-+.+..+-+.+.+. + ..++.+.|
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~~Di~fydR~-~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtD 117 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEGYDIIFYDRF-FNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTD 117 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCCCcEEEEecc-cchhhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCc
Confidence 47899999999999999864333221 1 11 0111 122356788888888777665555542 1 13678899
Q ss_pred HHHHHHHhcCCCCCcccCCCCc
Q 008931 184 QGFLNSYYSDFPNAHVFEPNLP 205 (548)
Q Consensus 184 QDiLN~~f~d~~~~~lf~P~~~ 205 (548)
-+.|..+..+ .+.|+..
T Consensus 118 NGAlH~~L~e-----~l~P~~~ 134 (222)
T PF03314_consen 118 NGALHIFLAE-----KLFPESS 134 (222)
T ss_pred cHHHHHHHHH-----HhCcccc
Confidence 9999999987 3566544
No 67
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=42.47 E-value=1.1e+02 Score=31.17 Aligned_cols=84 Identities=17% Similarity=0.127 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHhCCCCC--EEEEEcCCCCHHHHHHHHHc--CCEEEEeeeecCCCCCCCccchhhhhhhhcccccCcc
Q 008931 43 LLGVRVLGKSIRDTGSNKD--MVVLVSDGVSDYSKKLLKAD--GWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYK 118 (548)
Q Consensus 43 L~~a~VLi~SL~~~~s~~d--lVvIvtd~ls~e~~~~Lk~~--g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYd 118 (548)
...+.-++.||........ =+|+++|+-++.+.+.+.+. ......+.++..+... .+ .-.+=...+....|
T Consensus 11 ~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~---G~--~~a~N~g~~~A~gd 85 (299)
T cd02510 11 LSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKRE---GL--IRARIAGARAATGD 85 (299)
T ss_pred HHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCC---CH--HHHHHHHHHHccCC
Confidence 3666677899987654321 25677777666665555331 0001123334332211 01 11111222234578
Q ss_pred EEEEEcCcccccC
Q 008931 119 KVVYLDADTIVIK 131 (548)
Q Consensus 119 RVLYLDaDtLVl~ 131 (548)
=|++||+|+.+..
T Consensus 86 ~i~fLD~D~~~~~ 98 (299)
T cd02510 86 VLVFLDSHCEVNV 98 (299)
T ss_pred EEEEEeCCcccCc
Confidence 8999999999854
No 68
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=40.31 E-value=1.2e+02 Score=28.06 Aligned_cols=88 Identities=20% Similarity=0.212 Sum_probs=45.1
Q ss_pred EeCcchHHHHHHHHHHHHHhCC-CCC-EEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccch--hhhhhhhcc
Q 008931 37 LYGDEFLLGVRVLGKSIRDTGS-NKD-MVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFW--GVYTKLKIF 112 (548)
Q Consensus 37 ~tdd~YL~~a~VLi~SL~~~~s-~~d-lVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~--~sy~KL~l~ 112 (548)
++|+. ..+.-++.|+.+... ... -++++.|+-++++.+.+++.+..+.. ...+. ....... ..+.....
T Consensus 5 ~~ne~--~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~~~~~~~---~~~~~-~~gk~~aln~g~~~a~~- 77 (183)
T cd06438 5 AHNEE--AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAAGATVLE---RHDPE-RRGKGYALDFGFRHLLN- 77 (183)
T ss_pred ccchH--HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHcCCeEEE---eCCCC-CCCHHHHHHHHHHHHHh-
Confidence 45543 345566778876532 111 24566777777788888776654321 11111 1111000 00111100
Q ss_pred cccCccEEEEEcCcccccC
Q 008931 113 NMTNYKKVVYLDADTIVIK 131 (548)
Q Consensus 113 ~L~eYdRVLYLDaDtLVl~ 131 (548)
.-.++|-|+++|+|+++-.
T Consensus 78 ~~~~~d~v~~~DaD~~~~p 96 (183)
T cd06438 78 LADDPDAVVVFDADNLVDP 96 (183)
T ss_pred cCCCCCEEEEEcCCCCCCh
Confidence 0135899999999999864
No 69
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=38.82 E-value=1.8e+02 Score=27.92 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=45.4
Q ss_pred eEEEEEEeCcchHHHHHHHHHHHHHhCCC-CCEEEEEcCCCCHHHHHHHHHc-------CCEEEEeeeecCCCCCCCccc
Q 008931 31 QAYVTLLYGDEFLLGVRVLGKSIRDTGSN-KDMVVLVSDGVSDYSKKLLKAD-------GWIVEKISLLENPNQVRPKRF 102 (548)
Q Consensus 31 ~AyVtl~tdd~YL~~a~VLi~SL~~~~s~-~dlVvIvtd~ls~e~~~~Lk~~-------g~~v~~I~~I~~p~~~~~~r~ 102 (548)
..+|.-++|+. ..+.-++.|+.+..-. .++.|++-|+-++++.+.+++. +.++. .+...+. .. +
T Consensus 3 vSViIp~yNe~--~~l~~~L~sl~~q~~~~~~~eIiVvD~s~D~t~~~~~~~~~~~~~~~~~i~---~~~~~~~--~G-~ 74 (232)
T cd06437 3 VTVQLPVFNEK--YVVERLIEAACALDYPKDRLEIQVLDDSTDETVRLAREIVEEYAAQGVNIK---HVRRADR--TG-Y 74 (232)
T ss_pred eEEEEecCCcH--HHHHHHHHHHHhcCCCccceEEEEEECCCCcHHHHHHHHHHHHhhcCCceE---EEECCCC--CC-C
Confidence 44555556653 3456778888765322 2233333345555555555542 22222 2221111 10 1
Q ss_pred hhhhhhhhcccccCccEEEEEcCcccccCC
Q 008931 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 103 ~~sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
. ...+=...+..++|=|+.+|+|+++..+
T Consensus 75 k-~~a~n~g~~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 75 K-AGALAEGMKVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred c-hHHHHHHHHhCCCCEEEEEcCCCCCChH
Confidence 0 0111122234578999999999998644
No 70
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=35.99 E-value=2e+02 Score=28.03 Aligned_cols=85 Identities=19% Similarity=0.163 Sum_probs=48.3
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhc
Q 008931 32 AYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKI 111 (548)
Q Consensus 32 AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l 111 (548)
..+..++|+. ....-++.|+... .+=+++++++-++.+.+.+++.+.++... ++.. + ...|=..
T Consensus 3 svii~~~Ne~--~~l~~~l~sl~~~---~~eiivvD~gStD~t~~i~~~~~~~v~~~-----~~~g----~--~~~~n~~ 66 (229)
T cd02511 3 SVVIITKNEE--RNIERCLESVKWA---VDEIIVVDSGSTDRTVEIAKEYGAKVYQR-----WWDG----F--GAQRNFA 66 (229)
T ss_pred EEEEEeCCcH--HHHHHHHHHHhcc---cCEEEEEeCCCCccHHHHHHHcCCEEEEC-----CCCC----h--HHHHHHH
Confidence 4455556643 3445566777644 13356777777777788888766665322 1111 1 1112222
Q ss_pred ccccCccEEEEEcCcccccCC
Q 008931 112 FNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 112 ~~L~eYdRVLYLDaDtLVl~d 132 (548)
.+....|=|+.+|+|.++..+
T Consensus 67 ~~~a~~d~vl~lDaD~~~~~~ 87 (229)
T cd02511 67 LELATNDWVLSLDADERLTPE 87 (229)
T ss_pred HHhCCCCEEEEEeCCcCcCHH
Confidence 333456789999999887654
No 71
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=35.61 E-value=72 Score=29.06 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhCC-CCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEE
Q 008931 44 LGVRVLGKSIRDTGS-NKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVV 121 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s-~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVL 121 (548)
....-++.|+.+... ..+. ++++.++-+++..+.+++...+...+..+..+..... ...+-...+...-|=++
T Consensus 10 ~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~-----~~a~n~g~~~a~gd~i~ 84 (185)
T cd04179 10 ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGK-----GAAVRAGFKAARGDIVV 84 (185)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCc-----cHHHHHHHHHhcCCEEE
Confidence 344567778877743 1222 4456555555566666654322212222322211110 11111122222237799
Q ss_pred EEcCcccccCC-chHhhc
Q 008931 122 YLDADTIVIKN-IEDLFK 138 (548)
Q Consensus 122 YLDaDtLVl~d-LDeLF~ 138 (548)
.+|+|..+..+ ++++..
T Consensus 85 ~lD~D~~~~~~~l~~l~~ 102 (185)
T cd04179 85 TMDADLQHPPEDIPKLLE 102 (185)
T ss_pred EEeCCCCCCHHHHHHHHH
Confidence 99999887544 444444
No 72
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=34.89 E-value=2.1e+02 Score=30.70 Aligned_cols=104 Identities=20% Similarity=0.171 Sum_probs=52.7
Q ss_pred EEEEEeCcchHHHHHHHHHHHHHhC-C-CCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecC--CCCCCCccc-----h
Q 008931 33 YVTLLYGDEFLLGVRVLGKSIRDTG-S-NKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLEN--PNQVRPKRF-----W 103 (548)
Q Consensus 33 yVtl~tdd~YL~~a~VLi~SL~~~~-s-~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~--p~~~~~~r~-----~ 103 (548)
++.+++| ....+.-++.||++.. + +..-++|..|+-.++..+..+..+..+..|...+. .+...+..+ .
T Consensus 4 Vlv~ayN--Rp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~i 81 (334)
T cd02514 4 VLVIACN--RPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRI 81 (334)
T ss_pred EEEEecC--CHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHH
Confidence 3444444 4555667788888874 2 22234566677666666666665322222221110 000000011 0
Q ss_pred hhhhhh---hcccccCccEEEEEcCcccccCCchHhhc
Q 008931 104 GVYTKL---KIFNMTNYKKVVYLDADTIVIKNIEDLFK 138 (548)
Q Consensus 104 ~sy~KL---~l~~L~eYdRVLYLDaDtLVl~dLDeLF~ 138 (548)
+.-+|. .+++..++++||.||.|.++--|.=+.|+
T Consensus 82 a~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 82 ARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 111111 22333469999999999999987544444
No 73
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=32.24 E-value=95 Score=25.99 Aligned_cols=69 Identities=22% Similarity=0.295 Sum_probs=38.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHHc-CCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEEEcCcccccCCc
Q 008931 60 KDMVVLVSDGVSDYSKKLLKAD-GWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVYLDADTIVIKNI 133 (548)
Q Consensus 60 ~dlVvIvtd~ls~e~~~~Lk~~-g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLYLDaDtLVl~dL 133 (548)
.+.++|+.++-++.+.+.|++. ++.+. . ...|.. .......+.+..+-...+.|=|+++|+|=++.-+-
T Consensus 19 ~d~i~i~d~~s~D~t~~~l~~~~~v~i~--~-~~~~~~--~~~~~~~~~~~~~~~~~~~dWvl~~D~DEfl~~~~ 88 (97)
T PF13704_consen 19 VDHIYIYDDGSTDGTREILRALPGVGII--R-WVDPYR--DERRQRAWRNALIERAFDADWVLFLDADEFLVPPP 88 (97)
T ss_pred CCEEEEEECCCCccHHHHHHhCCCcEEE--E-eCCCcc--chHHHHHHHHHHHHhCCCCCEEEEEeeeEEEecCC
Confidence 5666778887777788888876 22221 1 111211 11111122222222234789999999998776544
No 74
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=32.11 E-value=1.8e+02 Score=32.55 Aligned_cols=106 Identities=19% Similarity=0.261 Sum_probs=48.6
Q ss_pred CeEEEEEEeC-cchHHHHHHHHHHHHHhCC---CCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecC-CCCCCCc--cc
Q 008931 30 DQAYVTLLYG-DEFLLGVRVLGKSIRDTGS---NKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLEN-PNQVRPK--RF 102 (548)
Q Consensus 30 r~AyVtl~td-d~YL~~a~VLi~SL~~~~s---~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~-p~~~~~~--r~ 102 (548)
..+++.+++| ++|+. -++.||.++.+ +.++ ++..|+-.++..+..++.+..+..|+..+. +....+. .+
T Consensus 94 ~~pVlV~AcNRp~yl~---r~L~sLl~~rp~~~~fpI-iVSQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~ 169 (434)
T PF03071_consen 94 VIPVLVFACNRPDYLR---RTLDSLLKYRPSAEKFPI-IVSQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKF 169 (434)
T ss_dssp ---EEEEESS-TT-HH---HHHHHHHHH-S-TTTS-E-EEEE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGG
T ss_pred cceEEEEecCCcHHHH---HHHHHHHHcCCCCCCccE-EEEecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccc
Confidence 3445555555 35554 46677777643 2343 345566666777777776533333332110 0001111 11
Q ss_pred -----hhhhhhhh---cccccCccEEEEEcCcccccCCchHhhcc
Q 008931 103 -----WGVYTKLK---IFNMTNYKKVVYLDADTIVIKNIEDLFKC 139 (548)
Q Consensus 103 -----~~sy~KL~---l~~L~eYdRVLYLDaDtLVl~dLDeLF~l 139 (548)
.+.-+|.. +|+...|++||.+.-|+.+--|.=+.|+.
T Consensus 170 ~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 170 KGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 12223322 23334699999999999998877666654
No 75
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=31.72 E-value=3e+02 Score=26.12 Aligned_cols=87 Identities=14% Similarity=0.171 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcCCE--EEEeeeecCCC-CCCCccchhhhhhhhcccccCccE
Q 008931 44 LGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADGWI--VEKISLLENPN-QVRPKRFWGVYTKLKIFNMTNYKK 119 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~--v~~I~~I~~p~-~~~~~r~~~sy~KL~l~~L~eYdR 119 (548)
..+.-++.||.......++ ++++.|+-++.+.+.+++...+ ...+..+..++ ...... ..+.|=...+..+.|-
T Consensus 10 ~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~a~N~g~~~a~gd~ 87 (219)
T cd06913 10 QWLDECLESVLQQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKG--VGYAKNQAIAQSSGRY 87 (219)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCcc--HHHHHHHHHHhcCCCE
Confidence 4555667888765422233 4566666555555555553111 00122221111 111111 1233334445567899
Q ss_pred EEEEcCcccccCC
Q 008931 120 VVYLDADTIVIKN 132 (548)
Q Consensus 120 VLYLDaDtLVl~d 132 (548)
+++||+|.++..+
T Consensus 88 i~~lD~D~~~~~~ 100 (219)
T cd06913 88 LCFLDSDDVMMPQ 100 (219)
T ss_pred EEEECCCccCChh
Confidence 9999999987654
No 76
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=31.10 E-value=1.4e+02 Score=30.44 Aligned_cols=87 Identities=21% Similarity=0.150 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEE
Q 008931 44 LGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVY 122 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s~~dlVv-Ivtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLY 122 (548)
.-..-.+.|+....+..++.+ ++.++-+++..+.|++.......+..+..+.. ...|..+-.|=...+..+-|-|++
T Consensus 17 ~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~--~~~f~~a~arN~g~~~A~~d~l~f 94 (281)
T PF10111_consen 17 ERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDN--GEPFSRAKARNIGAKYARGDYLIF 94 (281)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCC--CCCcCHHHHHHHHHHHcCCCEEEE
Confidence 445556788887656666655 45555554443444443111100011111111 111111222222233357789999
Q ss_pred EcCcccccCC
Q 008931 123 LDADTIVIKN 132 (548)
Q Consensus 123 LDaDtLVl~d 132 (548)
+|+|+++-.+
T Consensus 95 lD~D~i~~~~ 104 (281)
T PF10111_consen 95 LDADCIPSPD 104 (281)
T ss_pred EcCCeeeCHH
Confidence 9999999754
No 77
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=30.56 E-value=1.6e+02 Score=27.70 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHH
Q 008931 44 LGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLK 79 (548)
Q Consensus 44 ~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk 79 (548)
....-++.||.+..++. -++++.|+-++++.+.++
T Consensus 10 ~~l~~~l~sl~~~~~~~-eIivvdd~S~D~t~~~~~ 44 (191)
T cd06436 10 AVIQRTLASLLRNKPNF-LVLVIDDASDDDTAGIVR 44 (191)
T ss_pred HHHHHHHHHHHhCCCCe-EEEEEECCCCcCHHHHHh
Confidence 34556778888765222 355677777777777776
No 78
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=30.00 E-value=3.3e+02 Score=29.39 Aligned_cols=111 Identities=21% Similarity=0.269 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCccccc--cccccchhhhhhhHHHHHHHHhcchhhhh
Q 008931 416 WTFTMFFLLFGGFLHLIYKWGKATAFQAGSFSSDVESSDYDSGKGHQRQ--ASACDFVTWYYGMGMALLAVIAPSLPAMF 493 (548)
Q Consensus 416 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (548)
|+..++.++|+.|+.+.++..|..-... . +.. ++.+. ..|+.+ .+.+ .....-.+|+++++..+-.+-.
T Consensus 172 ~~giill~ly~~yl~~~~~~~~~~f~~~-~---~~~-~~~~~-~~~~~~~~~~~~-~~i~~l~~~~~~l~~~a~~lv~-- 242 (365)
T TIGR00846 172 GIAIVMLILYGAFLVFQLVTHRQLFEPQ-E---EAD-SDYDD-EVHEEPTVISPW-SAAAWLVGATIVVALLAEYLVD-- 242 (365)
T ss_pred HHHHHHHHHHHHHHHHHhccchhccccc-c---ccc-ccccc-ccccccccccHH-HHHHHHHHHHHHHHHHHHHHHH--
Confidence 6677888999999999988776532110 0 000 01000 012111 1111 0111222344444432222211
Q ss_pred hHHHHHHHHHH-HHHhhhhhHHHHhhhhhhH-HHHHHHhccccc
Q 008931 494 GVTALFLRLGL-MVAGGIVLASFMTYASEHL-AIRSYLRGLEDR 535 (548)
Q Consensus 494 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 535 (548)
++..+..++|. -...|+++..+.|-..|.. ++.+-.||+.|.
T Consensus 243 ~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~~l 286 (365)
T TIGR00846 243 TIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKLDI 286 (365)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcch
Confidence 22233333332 2356788888888888876 456666776654
No 79
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=28.14 E-value=1.9e+02 Score=28.37 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=44.2
Q ss_pred CCeEEEEEEeCcc-hHHHHHHHHHHHHHhCCCC-CE-EEEEcCCCCHHHHHHHHHcCCE--EEEeeeecCCCCCCCccch
Q 008931 29 TDQAYVTLLYGDE-FLLGVRVLGKSIRDTGSNK-DM-VVLVSDGVSDYSKKLLKADGWI--VEKISLLENPNQVRPKRFW 103 (548)
Q Consensus 29 sr~AyVtl~tdd~-YL~~a~VLi~SL~~~~s~~-dl-VvIvtd~ls~e~~~~Lk~~g~~--v~~I~~I~~p~~~~~~r~~ 103 (548)
++..+|.-++|+. .+. .++.++.+..... ++ +++++|+-++++.+.+++...+ ...+..+..+... . ..
T Consensus 9 ~~vsVvIp~yne~~~l~---~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~-G--~~ 82 (243)
T PLN02726 9 MKYSIIVPTYNERLNIA---LIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKL-G--LG 82 (243)
T ss_pred ceEEEEEccCCchhhHH---HHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCC-C--HH
Confidence 4566665666653 343 3445555432211 33 4566666666666666653111 1112222222111 1 11
Q ss_pred hhhhhhhcccccCccEEEEEcCcccc
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIV 129 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLV 129 (548)
.++ -...+..+-|-|+++|+|...
T Consensus 83 ~a~--n~g~~~a~g~~i~~lD~D~~~ 106 (243)
T PLN02726 83 TAY--IHGLKHASGDFVVIMDADLSH 106 (243)
T ss_pred HHH--HHHHHHcCCCEEEEEcCCCCC
Confidence 111 122223457889999999875
No 80
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=27.61 E-value=75 Score=33.79 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=29.9
Q ss_pred hhhhhhhcccc-cCccEEEEEcCcccccCCchHhhc
Q 008931 104 GVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFK 138 (548)
Q Consensus 104 ~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~ 138 (548)
..+.|++.-.+ ++|+--||+|+-+-+++|+.+|.+
T Consensus 139 ~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie 174 (305)
T PF04765_consen 139 GRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIE 174 (305)
T ss_pred CcccceeccccCCCCceEEEEeeeEEEecCHHHHHH
Confidence 45788888876 899999999999999999877664
No 81
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=27.40 E-value=1.4e+02 Score=28.17 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecC-CCCCCCccchhhhhhhhcccccCccEEEE
Q 008931 45 GVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLEN-PNQVRPKRFWGVYTKLKIFNMTNYKKVVY 122 (548)
Q Consensus 45 ~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~-p~~~~~~r~~~sy~KL~l~~L~eYdRVLY 122 (548)
.+..+++|+.......++ ++++.|+-++++.+.+++...+...+..+.. .+... ...+-...+...-|-|++
T Consensus 11 ~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~------~~a~n~g~~~a~gd~i~~ 84 (224)
T cd06442 11 NIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGL------GSAYIEGFKAARGDVIVV 84 (224)
T ss_pred hHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCCh------HHHHHHHHHHcCCCEEEE
Confidence 355677788765432333 4566666666555555543111111122221 11111 111112222233477999
Q ss_pred EcCcccccC
Q 008931 123 LDADTIVIK 131 (548)
Q Consensus 123 LDaDtLVl~ 131 (548)
+|+|.++..
T Consensus 85 lD~D~~~~~ 93 (224)
T cd06442 85 MDADLSHPP 93 (224)
T ss_pred EECCCCCCH
Confidence 999987643
No 82
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=26.19 E-value=3.4e+02 Score=29.05 Aligned_cols=114 Identities=14% Similarity=0.051 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCccccccccccch--hhhhhhHHHHHHHHhcchhhh
Q 008931 415 EWTFTMFFLLFGGFLHLIYKWGKATAFQAGSFSSDVESSDYDSGKGHQRQASACDFV--TWYYGMGMALLAVIAPSLPAM 492 (548)
Q Consensus 415 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 492 (548)
-|...+++++|+.|+.+.++..|.--.+. ....+. .+ ...|+....++... ......|.+.++..+-++-
T Consensus 154 ~~~aiill~lY~~~L~~~l~~h~~~f~~~-~~~~~~--~~---~~~~~~~~~~~~~~~~~~~L~~~~v~i~~~a~~lv-- 225 (349)
T TIGR00378 154 RGTSIVIIIVYVLFLYFQLGTHHALYEQQ-EAETDE--VM---ETIERNPHHSLSVKSSTVVLLGTTVIVAFCSEFLV-- 225 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHhCCc-cccccc--cc---ccccccccccccHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 35777889999999999987765411100 000000 00 01111111112221 1112333333333222211
Q ss_pred hhHHHHHHHHHH-HHHhhhhhHHHHhhhhhhHH-HHHHHhcccccc
Q 008931 493 FGVTALFLRLGL-MVAGGIVLASFMTYASEHLA-IRSYLRGLEDRD 536 (548)
Q Consensus 493 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 536 (548)
=++..+..++|+ -...|+++..+.|=..|+.. +++=.||+.|..
T Consensus 226 ~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~~~a 271 (349)
T TIGR00378 226 GTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKMDLA 271 (349)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCcccH
Confidence 122233333322 23568888888888889865 667777777654
No 83
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=25.84 E-value=2.8e+02 Score=26.05 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHhCC-CCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhhhhcccccCccEEEEE
Q 008931 45 GVRVLGKSIRDTGS-NKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTKLKIFNMTNYKKVVYL 123 (548)
Q Consensus 45 ~a~VLi~SL~~~~s-~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~KL~l~~L~eYdRVLYL 123 (548)
...-++.|+..... +.+ ++++.++-+++..+.+++.+..+ +..+.. . ...+-...+....|-|+.+
T Consensus 13 ~l~~~l~sl~~q~~~~~e-vivvdd~s~d~~~~~~~~~~~~~-----~~~~~g-~------~~a~n~g~~~a~~~~i~~~ 79 (221)
T cd02522 13 NLPRLLASLRRLNPLPLE-IIVVDGGSTDGTVAIARSAGVVV-----ISSPKG-R------ARQMNAGAAAARGDWLLFL 79 (221)
T ss_pred HHHHHHHHHHhccCCCcE-EEEEeCCCCccHHHHHhcCCeEE-----EeCCcC-H------HHHHHHHHHhccCCEEEEE
Confidence 45667888887643 233 45666666666667666632222 221111 1 1111112233347889999
Q ss_pred cCcccccC
Q 008931 124 DADTIVIK 131 (548)
Q Consensus 124 DaDtLVl~ 131 (548)
|+|..+..
T Consensus 80 D~D~~~~~ 87 (221)
T cd02522 80 HADTRLPP 87 (221)
T ss_pred cCCCCCCh
Confidence 99988854
No 84
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=25.78 E-value=5.4e+02 Score=24.53 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=13.0
Q ss_pred CccEEEEEcCcccccC
Q 008931 116 NYKKVVYLDADTIVIK 131 (548)
Q Consensus 116 eYdRVLYLDaDtLVl~ 131 (548)
++|=|+++|+|+++-.
T Consensus 84 ~~d~i~~lD~D~~~~~ 99 (236)
T cd06435 84 DAEIIAVIDADYQVEP 99 (236)
T ss_pred CCCEEEEEcCCCCcCH
Confidence 4788999999987643
No 85
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=24.56 E-value=99 Score=25.24 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccC
Q 008931 414 YEWTFTMFFLLFGGFLHLIYKWGKATAFQAGSF 446 (548)
Q Consensus 414 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (548)
..|....|+++|-++..++||-||.....-++.
T Consensus 11 ~a~~t~~~~l~fiavi~~ayr~~~K~~~d~aa~ 43 (60)
T COG4736 11 DAWGTIAFTLFFIAVIYFAYRPGKKGEFDEAAR 43 (60)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhHHHHhc
Confidence 567788888999999999999999887655544
No 86
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=24.07 E-value=6.2e+02 Score=26.78 Aligned_cols=98 Identities=19% Similarity=0.183 Sum_probs=49.9
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHcCCEE-EEeeeecCCCCCCCccchhhh
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIV-EKISLLENPNQVRPKRFWGVY 106 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~g~~v-~~I~~I~~p~~~~~~r~~~sy 106 (548)
++...+.=++|++- ....-++.|+...+ ++++ ++++.|+-+++..+.+++.+.+. ..+..+..+...+.+ -....
T Consensus 54 p~vsviiP~ynE~~-~~~~~~l~s~~~~dyp~~e-vivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK-~~al~ 130 (439)
T COG1215 54 PKVSVIIPAYNEEP-EVLEETLESLLSQDYPRYE-VIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGK-AGALN 130 (439)
T ss_pred CceEEEEecCCCch-hhHHHHHHHHHhCCCCCce-EEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccc-hHHHH
Confidence 45555555566532 12333455555552 3344 45677777888888888865332 122222110111111 00111
Q ss_pred hhhhcccccCccEEEEEcCcccccCC
Q 008931 107 TKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 107 ~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
..+ +..++|=|+.+|+|++.-.|
T Consensus 131 ~~l---~~~~~d~V~~~DaD~~~~~d 153 (439)
T COG1215 131 NGL---KRAKGDVVVILDADTVPEPD 153 (439)
T ss_pred HHH---hhcCCCEEEEEcCCCCCChh
Confidence 111 12348899999999998875
No 87
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=23.60 E-value=5.6e+02 Score=26.86 Aligned_cols=98 Identities=21% Similarity=0.213 Sum_probs=48.6
Q ss_pred CCeEEEEEEeCc-chHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHc----CCEEEEeeeecCCCCCCCccc
Q 008931 29 TDQAYVTLLYGD-EFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKAD----GWIVEKISLLENPNQVRPKRF 102 (548)
Q Consensus 29 sr~AyVtl~tdd-~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~----g~~v~~I~~I~~p~~~~~~r~ 102 (548)
.+...|.-++|+ +.++...-.+.+..+.. .+.+ +++++|+-++.+.+.+++. +.++..+.. ..+....
T Consensus 6 ~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~E-IIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~--~~n~G~~--- 79 (325)
T PRK10714 6 KKVSVVIPVYNEQESLPELIRRTTAACESLGKEYE-ILLIDDGSSDNSAEMLVEAAQAPDSHIVAILL--NRNYGQH--- 79 (325)
T ss_pred CeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEE-EEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEe--CCCCCHH---
Confidence 345555556675 45555544444433322 2233 4567777666666666553 223322211 1111110
Q ss_pred hhhhhhhhcccccCccEEEEEcCcccccCCchHhh
Q 008931 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLF 137 (548)
Q Consensus 103 ~~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF 137 (548)
. ......+..+.|-|+++|+|... +.+++-
T Consensus 80 -~--A~~~G~~~A~gd~vv~~DaD~q~--~p~~i~ 109 (325)
T PRK10714 80 -S--AIMAGFSHVTGDLIITLDADLQN--PPEEIP 109 (325)
T ss_pred -H--HHHHHHHhCCCCEEEEECCCCCC--CHHHHH
Confidence 1 11122333467999999999874 444443
No 88
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=22.84 E-value=6.3e+02 Score=25.92 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHhhhhhHHHH
Q 008931 497 ALFLRLGLMVAGGIVLASFM 516 (548)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~ 516 (548)
..+.+.+++++||+.-..+.
T Consensus 70 ~~~~~~~l~~~Gglwy~~ls 89 (284)
T PF12805_consen 70 EALEHALLFLAGGLWYLLLS 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55667777777776544443
No 89
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=22.76 E-value=2e+02 Score=32.55 Aligned_cols=104 Identities=16% Similarity=0.251 Sum_probs=60.1
Q ss_pred EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCc-cchhhhhhhhcccccCccEEEEEcCcccc--cCCchHhhcc
Q 008931 63 VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPK-RFWGVYTKLKIFNMTNYKKVVYLDADTIV--IKNIEDLFKC 139 (548)
Q Consensus 63 VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~-r~~~sy~KL~l~~L~eYdRVLYLDaDtLV--l~dLDeLF~l 139 (548)
+++....++++.+++|++.-..+ +..+|...+- -|......+-..+|.+||.|+.+ -|+++ +.+++++|+.
T Consensus 2 v~VsN~~l~~~~~~~L~~~~~~v-----i~R~N~GyDfgayk~gl~~~g~~~L~~~d~lil~-NDS~~GP~~~l~~~f~~ 75 (498)
T PF05045_consen 2 VFVSNSPLSEEDREKLKDLCDKV-----IQRENEGYDFGAYKDGLEHLGWERLKDYDELILM-NDSCFGPLFPLSEMFER 75 (498)
T ss_pred EEEECCCCCHHHHHHHHHHHHHh-----EEeccCCcCHHHHHHHHHHcCchhhcCCCeEEEE-CCEEEeeCccHHHHHHH
Confidence 45666779999999999842222 2233333221 23333333333457899998877 46654 5677777764
Q ss_pred h-----hhhc-----ccC---------CCCcccceEEEEeCCH---HHHHHHHHH
Q 008931 140 R-----KFCA-----NLK---------HSERLNSGVMVVEPSA---AVFNDMMTK 172 (548)
Q Consensus 140 p-----~~~A-----av~---------~~~yFNSGVMLInps~---~~f~~Ile~ 172 (548)
- .+.+ .++ .+..++|=+++++.+. ..|++..+.
T Consensus 76 ~~~~~~DfwGlT~~~~~~~~~~~~~~~~~~HlQSyFl~~~~~~~~s~~F~~fW~~ 130 (498)
T PF05045_consen 76 MEARDVDFWGLTESREVKPDPFNGTGYFPEHLQSYFLVFRKKVLQSPAFRRFWEN 130 (498)
T ss_pred hccCCCeEEeecCccccCCCcccccCCchhhhhceeeEeccchhcCHHHHHHHHh
Confidence 2 1222 111 2466899999999995 345544443
No 90
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=22.33 E-value=4.7e+02 Score=30.78 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=15.9
Q ss_pred ccCccEEEEEcCcccccCC
Q 008931 114 MTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 114 L~eYdRVLYLDaDtLVl~d 132 (548)
..+.|=|+.+|+|+++..|
T Consensus 226 ~a~gd~Il~lDAD~v~~pd 244 (713)
T TIGR03030 226 HTDGELILIFDADHVPTRD 244 (713)
T ss_pred hcCCCEEEEECCCCCcChh
Confidence 3567999999999999765
No 91
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=21.59 E-value=4.1e+02 Score=27.77 Aligned_cols=95 Identities=21% Similarity=0.132 Sum_probs=49.1
Q ss_pred CCCeEEEEEEeCcchHHHHHHHHHHHHHhCC--CCCEEEEEcCCCCHHHHHHHHHcCCEEEE-eeeecCCCCCCCccchh
Q 008931 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGS--NKDMVVLVSDGVSDYSKKLLKADGWIVEK-ISLLENPNQVRPKRFWG 104 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s--~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~-I~~I~~p~~~~~~r~~~ 104 (548)
..+..+|.-++|+. ....-++.|+.+... ..+-+++++|+-++.+.+.+++.+.++.. ...+........ ...
T Consensus 30 ~~~vSVVIPayNee--~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~G--kg~ 105 (306)
T PRK13915 30 GRTVSVVLPALNEE--ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPG--KGE 105 (306)
T ss_pred CCCEEEEEecCCcH--HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCC--HHH
Confidence 34555555556653 223455667765422 22335677787777788888877654321 111110000011 011
Q ss_pred hhhhhhcccccCccEEEEEcCccc
Q 008931 105 VYTKLKIFNMTNYKKVVYLDADTI 128 (548)
Q Consensus 105 sy~KL~l~~L~eYdRVLYLDaDtL 128 (548)
+..+ .....+.|-|+++|+|..
T Consensus 106 A~~~--g~~~a~gd~vv~lDaD~~ 127 (306)
T PRK13915 106 ALWR--SLAATTGDIVVFVDADLI 127 (306)
T ss_pred HHHH--HHHhcCCCEEEEEeCccc
Confidence 1111 122356789999999997
No 92
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=20.21 E-value=3.6e+02 Score=24.58 Aligned_cols=23 Identities=22% Similarity=0.260 Sum_probs=15.4
Q ss_pred CccEEEEEcCcccccCC-chHhhc
Q 008931 116 NYKKVVYLDADTIVIKN-IEDLFK 138 (548)
Q Consensus 116 eYdRVLYLDaDtLVl~d-LDeLF~ 138 (548)
.-|-|+++|+|...-.+ ++++.+
T Consensus 80 ~~d~i~~~D~D~~~~~~~l~~l~~ 103 (181)
T cd04187 80 RGDAVITMDADLQDPPELIPEMLA 103 (181)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHH
Confidence 34789999999987433 344433
Done!