Query 008931
Match_columns 548
No_of_seqs 238 out of 1439
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 14:59:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 2.6E-40 8.9E-45 333.1 18.1 214 29-260 3-224 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 2.8E-37 9.4E-42 320.2 17.8 215 29-261 2-224 (333)
3 3tzt_A Glycosyl transferase fa 100.0 2.3E-31 8E-36 268.7 12.6 221 34-279 8-272 (276)
4 1g9r_A Glycosyl transferase; a 100.0 3.7E-30 1.3E-34 263.1 15.9 219 34-279 3-272 (311)
5 3ioh_A Histo-blood group ABO s 79.7 4.9 0.00017 40.8 8.2 185 30-249 59-288 (298)
6 1o7q_A N-acetyllactosaminide a 76.6 11 0.00039 38.0 9.7 183 30-249 49-278 (289)
7 3bcv_A Putative glycosyltransf 68.8 5.7 0.00019 36.7 5.2 91 29-132 5-100 (240)
8 2d7i_A Polypeptide N-acetylgal 64.5 7.8 0.00027 42.1 6.0 99 28-132 111-212 (570)
9 1qg8_A Protein (spore coat pol 61.2 12 0.00041 34.8 5.9 96 30-132 2-104 (255)
10 3f1y_A Mannosyl-3-phosphoglyce 55.0 50 0.0017 34.1 9.9 96 28-128 93-191 (387)
11 3ckj_A Putative uncharacterize 52.9 23 0.00078 35.2 6.7 103 28-137 47-154 (329)
12 2z86_A Chondroitin synthase; G 52.4 28 0.00097 37.5 7.8 96 30-132 94-190 (625)
13 1fo8_A Alpha-1,3-mannosyl-glyc 51.8 54 0.0018 33.6 9.4 101 32-138 5-121 (343)
14 1xhb_A Polypeptide N-acetylgal 51.2 26 0.00088 36.4 7.0 100 27-132 27-130 (472)
15 2p6w_A VP54, putative glycosyl 40.3 42 0.0014 32.2 5.8 56 114-169 70-137 (213)
16 4ayl_A BOGT-metal-independent 31.7 48 0.0016 32.8 4.9 90 33-134 5-105 (246)
17 2ffu_A Ppgalnact-2, polypeptid 30.7 1.2E+02 0.0042 31.6 8.4 96 28-132 65-162 (501)
18 2z86_A Chondroitin synthase; G 24.8 57 0.0019 35.1 4.5 91 29-132 375-470 (625)
19 2zuq_A Disulfide bond formatio 24.5 2E+02 0.0068 26.4 7.6 22 464-485 126-148 (176)
20 4hg6_A Cellulose synthase subu 22.9 87 0.003 35.5 5.7 19 114-132 236-254 (802)
21 1s4n_A Glycolipid 2-alpha-mann 21.3 6.7E+02 0.023 25.8 11.4 112 27-139 25-169 (348)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=2.6e-40 Score=333.14 Aligned_cols=214 Identities=33% Similarity=0.566 Sum_probs=180.3
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCC-----CCCccch
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQ-----VRPKRFW 103 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~-----~~~~r~~ 103 (548)
+++||||+++|++|++++.|+++||++++++++++++++++++++.++.|++.+.++++|+.++.+.. ....++.
T Consensus 3 ~~~AyvTl~td~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~~ 82 (263)
T 3u2u_A 3 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELG 82 (263)
T ss_dssp TTEEEEEEESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTGG
T ss_pred cceEEEEEEECHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcchh
Confidence 48999999999999999999999999999999999999999999999999999999888887764321 1112356
Q ss_pred hhhhhhhcccccCccEEEEEcCcccccCCchHhhcchhhhcc--cCCCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCC
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCAN--LKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTG 181 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp~~~Aa--v~~~~yFNSGVMLInps~~~f~~Ile~l~~~~~~~~ 181 (548)
.+|+||.+|++++||||||||+|++|++||||||+++.++|. .++++|||||||||||+...++++++.+.+.+++.+
T Consensus 83 ~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~~~aA~~d~~~~~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~ 162 (263)
T 3u2u_A 83 VTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDG 162 (263)
T ss_dssp GGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECTTSTTSEEEEEEEECCCHHHHHHHHHHHHHHCCTTS
T ss_pred HHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCCcceEeccCCCCccccCeEEEEcccHHHHHHHHHHHHhcCCCCc
Confidence 799999999999999999999999999999999999977664 356799999999999999999999999988778889
Q ss_pred ChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccccccc-ccccccccccCCCCcEEEEeeCCCCCCCCCC
Q 008931 182 GDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVG-LYMLANKWMVDESELHVIHYTLGPLKPWDWW 260 (548)
Q Consensus 182 ~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~-~Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w 260 (548)
+|||+||.+|+++.. + .++.+||..||++.. .|...+.|....++++||||+ |+.|||+..
T Consensus 163 ~DQd~LN~~f~~w~~----------------~-~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~-g~~KPW~~~ 224 (263)
T 3u2u_A 163 GDQGILNTFFSSWAT----------------T-DIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFL-GRVKPWNYT 224 (263)
T ss_dssp SHHHHHHHHTTTTTT----------------S-CGGGBCCGGGSEEHHHHHSSHHHHHHHGGGCSEEECC-SSSCGGGSE
T ss_pred ccHHHHHHHhccccc----------------c-CeeEeCCcccccccchhccccHHHHhhcCCeEEEEEC-CCCcCCCCC
Confidence 999999999998521 0 046889999999764 232233333345789999996 889999963
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=2.8e-37 Score=320.24 Aligned_cols=215 Identities=31% Similarity=0.534 Sum_probs=176.8
Q ss_pred CCeEEEEEEeCcchHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCC-----Cccch
Q 008931 29 TDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVR-----PKRFW 103 (548)
Q Consensus 29 sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~-----~~r~~ 103 (548)
+|+||||+++|++|++++.|+++||++++++.+++++++++++++.++.|++.+.+++.|+.++.+.... ..++.
T Consensus 2 s~~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~~ 81 (333)
T 1ll2_A 2 TDQAFVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELG 81 (333)
T ss_dssp CSEEEEEEESSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGH
T ss_pred CceEEEEEEeCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccchH
Confidence 5899999999999999999999999999999999999999999999999999988887777665432111 11245
Q ss_pred hhhhhhhcccccCccEEEEEcCcccccCCchHhhcchhhhcc--cCCCCcccceEEEEeCCHHHHHHHHHHHHhcCCCCC
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKNIEDLFKCRKFCAN--LKHSERLNSGVMVVEPSAAVFNDMMTKVNTLGSYTG 181 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLVl~dLDeLF~lp~~~Aa--v~~~~yFNSGVMLInps~~~f~~Ile~l~~~~~~~~ 181 (548)
.+|+||++|++++||||||||+|++|++||||||+++.++|. .+++.||||||||+||+...++++++.+.+.+.+.+
T Consensus 82 ~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d~~~~~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~ 161 (333)
T 1ll2_A 82 VTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDG 161 (333)
T ss_dssp HHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSSSTTSEEEEEEEECCCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEecCCCCcceeeeEEEEeCCHHHHHHHHHHHHhcCCCCC
Confidence 789999999999999999999999999999999999876654 356789999999999999999999999988778889
Q ss_pred ChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccccccccc-cccccccccCCCCcEEEEeeCCCCCCCCCC
Q 008931 182 GDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGL-YMLANKWMVDESELHVIHYTLGPLKPWDWW 260 (548)
Q Consensus 182 ~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~-Y~~~~~w~~~~~~~~IIHFt~Gp~KPW~~w 260 (548)
+|||+||.+|.++.. + . .+.+||..||++.+. |...+.+....++++||||+ |+.|||+..
T Consensus 162 ~DQ~~LN~~f~~~~~-----~----------~--~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~~~IiHf~-g~~KPW~~~ 223 (333)
T 1ll2_A 162 GDQGLLNTFFNSWAT-----T----------D--IRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFL-GQTKPWNYT 223 (333)
T ss_dssp SHHHHHHHHTTTTTT-----S----------C--GGGBCCGGGSEETTHHHHTHHHHHHHGGGCSEEECC-SSCCGGGSC
T ss_pred CCHHHHHHHHHhhcc-----c----------C--ccccCCcHHhcccccchhccHHHHhhcCCCEEEEEC-CCCCCCCCC
Confidence 999999999987520 0 0 246799999998653 32222222235789999996 888999875
Q ss_pred c
Q 008931 261 T 261 (548)
Q Consensus 261 ~ 261 (548)
.
T Consensus 224 ~ 224 (333)
T 1ll2_A 224 Y 224 (333)
T ss_dssp E
T ss_pred C
Confidence 3
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.97 E-value=2.3e-31 Score=268.68 Aligned_cols=221 Identities=21% Similarity=0.285 Sum_probs=152.8
Q ss_pred EEEEeCcchHHHHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHc----CCEEEEeeeecCCCCC--CCccc-hhh
Q 008931 34 VTLLYGDEFLLGVRVLGKSIRDTGSNKDMVV-LVSDGVSDYSKKLLKAD----GWIVEKISLLENPNQV--RPKRF-WGV 105 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL~~~~s~~dlVv-Ivtd~ls~e~~~~Lk~~----g~~v~~I~~I~~p~~~--~~~r~-~~s 105 (548)
|++++|++|++++.|+++||++|+++.++.+ +++++++++.++.|++. +.++..+++-+..... ..+++ ..+
T Consensus 8 I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~ 87 (276)
T 3tzt_A 8 LLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVTDRYPKEM 87 (276)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------CHHH
T ss_pred EEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCccccccCHHH
Confidence 4578899999999999999999988666654 67889999998888774 4454433321100001 12334 368
Q ss_pred hhhhhcccc-c-CccEEEEEcCcccccCCchHhhcchh---hhcccC------------------CCCcccceEEEEeCC
Q 008931 106 YTKLKIFNM-T-NYKKVVYLDADTIVIKNIEDLFKCRK---FCANLK------------------HSERLNSGVMVVEPS 162 (548)
Q Consensus 106 y~KL~l~~L-~-eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav~------------------~~~yFNSGVMLInps 162 (548)
|.||+++++ + ++|||||||+|++|++||+|||+++. ..|+++ ...||||||||||++
T Consensus 88 ~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV~linl~ 167 (276)
T 3tzt_A 88 YYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGLLLINLK 167 (276)
T ss_dssp HHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEEEEEEHH
T ss_pred HHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeEEEEEHH
Confidence 999999998 3 69999999999999999999999862 223211 137999999999999
Q ss_pred HHHHHHHHHHH----Hhc-CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccc-cccccccccc---c
Q 008931 163 AAVFNDMMTKV----NTL-GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLST-LYNADVGLYM---L 233 (548)
Q Consensus 163 ~~~f~~Ile~l----~~~-~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~-~YN~~~~~Y~---~ 233 (548)
+|+.+++.+++ .+. .++.++|||+||.+|.+ ++..||. +||++.+.+. .
T Consensus 168 ~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~----------------------~~~~Lp~~~wN~~~~~~~~~~~ 225 (276)
T 3tzt_A 168 RAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGD----------------------RIYPLDDLIYNYDARNYSSYLI 225 (276)
T ss_dssp HHHHHCCHHHHHHHHHHC--------CHHHHHHHGG----------------------GEEEEEHHHHSEETTCHHHHHH
T ss_pred HHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhC----------------------CEEECCchheeeecccchhhhc
Confidence 99876655554 333 35678999999999988 4788998 8999876432 1
Q ss_pred c--ccc--ccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHHhh
Q 008931 234 A--NKW--MVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKLE 279 (548)
Q Consensus 234 ~--~~w--~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~le 279 (548)
. .++ ....++++||||+ |+.|||+..+... ..++|+.+....+
T Consensus 226 ~~~~~~~~~~~~~~~~iiHy~-g~~KPW~~~~~~~--~~~~w~~Y~~~~~ 272 (276)
T 3tzt_A 226 RSKKQADLAWLMDHTVVLHFC-GRDKPWKKNHRNK--FTSLYKHYMSLTK 272 (276)
T ss_dssp HTTTCCSHHHHHHHCCEEECC-SSCCTTSTTCCST--THHHHHHHHHHHH
T ss_pred cccchhhhhhhccCCeEEEEC-CCCCCcCCCCCCc--hHHHHHHHHHHHH
Confidence 1 111 1134689999996 8899999876433 3578888776654
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.97 E-value=3.7e-30 Score=263.08 Aligned_cols=219 Identities=18% Similarity=0.256 Sum_probs=156.4
Q ss_pred EEEEeCcchHHHHHHHHHHH-HHhCCCCCEE-EEEcCCCCHHHHHHHHHc----CCEEEEeeeecCCC-CCC---Cccc-
Q 008931 34 VTLLYGDEFLLGVRVLGKSI-RDTGSNKDMV-VLVSDGVSDYSKKLLKAD----GWIVEKISLLENPN-QVR---PKRF- 102 (548)
Q Consensus 34 Vtl~tdd~YL~~a~VLi~SL-~~~~s~~dlV-vIvtd~ls~e~~~~Lk~~----g~~v~~I~~I~~p~-~~~---~~r~- 102 (548)
|++++|++|++++.|+++|| ++++ +.++. ++++++++++.++.|++. +.++..+++ +... ... ..++
T Consensus 3 I~~~~d~~Y~~~~~vli~Sl~l~~~-~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~s 80 (311)
T 1g9r_A 3 IVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDV-NPEDFAGFPLNIRHIS 80 (311)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHTCT-TSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEEC-CGGGGTTSCCCCTTCC
T ss_pred EEEECCHhHHHHHHHHHHHHHHHcC-CCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEc-CHHHHhcCccccccCC
Confidence 56789999999999999999 6664 44443 356888999999999885 444433332 1110 011 1222
Q ss_pred hhhhhhhhcccc-cCccEEEEEcCcccccCCchHhhcchh---hhccc------------------CCCCcccceEEEEe
Q 008931 103 WGVYTKLKIFNM-TNYKKVVYLDADTIVIKNIEDLFKCRK---FCANL------------------KHSERLNSGVMVVE 160 (548)
Q Consensus 103 ~~sy~KL~l~~L-~eYdRVLYLDaDtLVl~dLDeLF~lp~---~~Aav------------------~~~~yFNSGVMLIn 160 (548)
..+|.||+++++ +++|||||||+|++|++||+|||+++. ..|++ ....||||||||+|
T Consensus 81 ~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv~lin 160 (311)
T 1g9r_A 81 ITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGVLLIN 160 (311)
T ss_dssp GGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeeeeeee
Confidence 368999999996 799999999999999999999999862 22221 12469999999999
Q ss_pred CCHHHH----HHHHHHHHhc-CCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCccccccccccccccccccc
Q 008931 161 PSAAVF----NDMMTKVNTL-GSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLYNADVGLYMLAN 235 (548)
Q Consensus 161 ps~~~f----~~Ile~l~~~-~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~YN~~~~~Y~~~~ 235 (548)
+++|+. +++.+.+.+. .++.++|||+||.+|.+ ++..||..||++.+.+....
T Consensus 161 l~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~----------------------~~~~Lp~~wN~~~~~~~~~~ 218 (311)
T 1g9r_A 161 LKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKG----------------------GVCYANSRFNFMPTNYAFMA 218 (311)
T ss_dssp HHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTT----------------------SEEEECGGGSBCHHHHHTCC
T ss_pred HHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcC----------------------CEEEcChhhccCcchhhHHh
Confidence 999874 4455555443 35778999999999987 47889999999764321100
Q ss_pred -------------ccccCCCCcEEEEeeCCCCCCCCCCccCCCCchhHHHHHHHHhh
Q 008931 236 -------------KWMVDESELHVIHYTLGPLKPWDWWTSWLLKPVDVWQDIRVKLE 279 (548)
Q Consensus 236 -------------~w~~~~~~~~IIHFt~Gp~KPW~~w~~~~~~~~~lW~~ir~~le 279 (548)
......++++||||+ |+.|||+.++.+.. .+.|+.+..+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~iiHy~-g~~KPW~~~~~~~~--~~~~~~~~~~~~ 272 (311)
T 1g9r_A 219 NWFASRHTDPLYRDRTNTVMPVAVSHYC-GPAKPWHRDCTAWG--AERFTELAGSLT 272 (311)
T ss_dssp ----CSCCCHHHHHHHSCCSSCSEEECC-SSCCTTSSSCCSTT--THHHHHHHHTCS
T ss_pred hhcccccchhhhhHHhhccCCCEEEEeC-CcCCCCCCCCCCcc--HHHHHHHHHhhc
Confidence 012234689999996 88999998876543 366777666643
No 5
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=79.70 E-value=4.9 Score=40.85 Aligned_cols=185 Identities=13% Similarity=0.117 Sum_probs=95.8
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEE-EEEcCCCCHHHHHHHHHcCC-EEEEeeeecCCCCCCCccch-hh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMV-VLVSDGVSDYSKKLLKADGW-IVEKISLLENPNQVRPKRFW-GV 105 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlV-vIvtd~ls~e~~~~Lk~~g~-~v~~I~~I~~p~~~~~~r~~-~s 105 (548)
+.+..+++++ .|+....-.++|..++- ..++.+ ++.+|+.+. +-.... ..+.+.+++.+. ..+|. .+
T Consensus 59 tIGl~vfA~G-kY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~~-----vP~v~l~~~r~~~V~~v~~---~~~Wqd~s 129 (298)
T 3ioh_A 59 TIGLTVFAIK-KYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAA-----VPRVTLGTGRQLSVLEVRA---YKRWQDVS 129 (298)
T ss_dssp EEEEEEEECG-GGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGG-----SCCCCCCTTEEEEEEECCC---CSSHHHHH
T ss_pred cEEEEEEEeC-cHHHHHHHHHHhHHHhccCCceEEEEEEeCChhh-----CCccccCCCCeEEEEEecc---ccCCcccc
Confidence 3455555544 56666666777777764 444443 355665221 000000 011222232221 23454 46
Q ss_pred hhhhhccc-------ccCccEEEEEcCcccccCCchH-----hhcc--hhh---------------h-cccC--CC-Ccc
Q 008931 106 YTKLKIFN-------MTNYKKVVYLDADTIVIKNIED-----LFKC--RKF---------------C-ANLK--HS-ERL 152 (548)
Q Consensus 106 y~KL~l~~-------L~eYdRVLYLDaDtLVl~dLDe-----LF~l--p~~---------------~-Aav~--~~-~yF 152 (548)
..|+.+.. +.++|=+..+|+|+.+.+++.. |+.. +.+ + |-++ .+ -|+
T Consensus 130 m~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG~E~Lg~lva~lHp~~y~~~~~~FpYERrp~S~AyIp~~eGdfYY 209 (298)
T 3ioh_A 130 MRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKDEGDFYY 209 (298)
T ss_dssp HHHHHHHHHHHHHTHHHHCSEEEEEESSEEECSCBCGGGCSSEEEEBCTTTTTSCGGGSCCCCCTTSTTCCCTTCCSCCB
T ss_pred HHHHHHHHHHHHHHHhhcCCEEEEecCCCeeccCccHHHhHhhHhhcChhhhcCCcccCcccCCccccccccCCCCCeEE
Confidence 67776653 2468999999999999997642 2222 100 0 1122 22 244
Q ss_pred cceEEEEeCCHHHHHHHHHHH--------HhcCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccccc
Q 008931 153 NSGVMVVEPSAAVFNDMMTKV--------NTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLSTLY 224 (548)
Q Consensus 153 NSGVMLInps~~~f~~Ile~l--------~~~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~~Y 224 (548)
-+|+.==.+ ...-++.+.| .+.-.-.++|..=||.+|-.++ ..+.|++.|
T Consensus 210 ~ga~fGGt~--~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hK--------------------PtKvLSPEY 267 (298)
T 3ioh_A 210 GGAFFGGSV--QEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHK--------------------PTKVLSPEY 267 (298)
T ss_dssp CTTEEEEEH--HHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSC--------------------CSEEECGGG
T ss_pred eeeecCCcH--HHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcC--------------------CCceeCHHH
Confidence 444432122 2233333333 3333446899999999997643 257899999
Q ss_pred cccccccccccccccCCCCcEEEEe
Q 008931 225 NADVGLYMLANKWMVDESELHVIHY 249 (548)
Q Consensus 225 N~~~~~Y~~~~~w~~~~~~~~IIHF 249 (548)
+++.... .+....+.+++++-
T Consensus 268 ~Wd~~~~----~~~~~i~~~r~~~~ 288 (298)
T 3ioh_A 268 LWDQQLL----GWPAVLRKLRFTAV 288 (298)
T ss_dssp SBCHHHH----CCCTTCSCCCEEEC
T ss_pred cCCcccc----CCCcceeEEEEEec
Confidence 9875321 11223455555554
No 6
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=76.59 E-value=11 Score=38.05 Aligned_cols=183 Identities=12% Similarity=0.103 Sum_probs=97.8
Q ss_pred CeEEEEEEeCcchH-HHHHHHHHHHHHhC-CCCCEEE-EEcCCCCHHHHHHHHH--cCCEEEEeeeecCCCCCCCccch-
Q 008931 30 DQAYVTLLYGDEFL-LGVRVLGKSIRDTG-SNKDMVV-LVSDGVSDYSKKLLKA--DGWIVEKISLLENPNQVRPKRFW- 103 (548)
Q Consensus 30 r~AyVtl~tdd~YL-~~a~VLi~SL~~~~-s~~dlVv-Ivtd~ls~e~~~~Lk~--~g~~v~~I~~I~~p~~~~~~r~~- 103 (548)
+.+...++++ .|. ...--.++|..++- .+++.++ +.||+.+. +-. .+. .+.+.++..+. ..+|.
T Consensus 49 tIGl~vfa~G-kY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~-----~p~v~l~~-~r~~~V~~i~~---~~~W~d 118 (289)
T 1o7q_A 49 TVGLTVFAVG-RYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSR-----MPLIELGP-LRSFKVFKIKP---EKRWQD 118 (289)
T ss_dssp CEEEEEEECT-THHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGG-----CCCCCCCT-TEEEEEEECCC---CSSHHH
T ss_pred eEEEEEEEec-ccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhh-----CCccccCC-CCeEEEEEecc---ccCCch
Confidence 5566655555 687 77777888888874 4555543 66765221 000 010 11222232222 22353
Q ss_pred hhhhhhhccc-------ccCccEEEEEcCcccccCCchH-----hhcc--hhh---------------hcc-cC--CC-C
Q 008931 104 GVYTKLKIFN-------MTNYKKVVYLDADTIVIKNIED-----LFKC--RKF---------------CAN-LK--HS-E 150 (548)
Q Consensus 104 ~sy~KL~l~~-------L~eYdRVLYLDaDtLVl~dLDe-----LF~l--p~~---------------~Aa-v~--~~-~ 150 (548)
.+..|+.++. +.++|=+..+|+|+++.+++.. |+.. +.+ ++| ++ .+ -
T Consensus 119 ~sm~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E~Lg~lv~~lHp~~y~~~~~~fpYERrp~S~AyIp~~eGdf 198 (289)
T 1o7q_A 119 ISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETLGESVAQLQAWWYKADPNDFTYERRKESAAYIPFGEGDF 198 (289)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGGGCSSEEEEECTTTTTSCGGGSCCCCCTTSTTCCCTTCCSC
T ss_pred hHHHHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHHHHHHHHHccCHHHhCCCCCCCCCCCCcCceeeecCCCCCE
Confidence 4666665543 2479999999999999998743 1111 100 011 22 22 3
Q ss_pred cccceEEEEeCCHHHHHHHHHHH--------HhcCCCCCChHHHHHHHhcCCCCCcccCCCCccccccCCCCCCcccccc
Q 008931 151 RLNSGVMVVEPSAAVFNDMMTKV--------NTLGSYTGGDQGFLNSYYSDFPNAHVFEPNLPLEVVNTRPVPNMERLST 222 (548)
Q Consensus 151 yFNSGVMLInps~~~f~~Ile~l--------~~~~~~~~~DQDiLN~~f~d~~~~~lf~P~~~~~l~~~~p~~~~~rLp~ 222 (548)
|+-+|+.==. ...+-++.+.| .+.-.-.++|..=||.+|-.++ | ...||+
T Consensus 199 YY~Ga~fGGt--~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~K-----------------P---tKvLSP 256 (289)
T 1o7q_A 199 YYHAAIFGGT--PTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNK-----------------P---TKILSP 256 (289)
T ss_dssp CEEEEEEEEC--HHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSC-----------------C---SEEECG
T ss_pred EEEceeeCCc--HHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcC-----------------C---CEEECH
Confidence 4444443222 23333444433 2333446899999999986542 2 466999
Q ss_pred cccccccccccccccccCCCCcEEEEe
Q 008931 223 LYNADVGLYMLANKWMVDESELHVIHY 249 (548)
Q Consensus 223 ~YN~~~~~Y~~~~~w~~~~~~~~IIHF 249 (548)
.|+++.+... ....+.++++|-
T Consensus 257 EY~wd~~~~~-----p~~ik~~r~~~~ 278 (289)
T 1o7q_A 257 EYCWDYHIGL-----PADIKLVKMSWQ 278 (289)
T ss_dssp GGSBCGGGCC-----CTTCCSCSEEEC
T ss_pred HHCCCcccCC-----CccccEEEEEEe
Confidence 9998754321 113455555554
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=68.77 E-value=5.7 Score=36.66 Aligned_cols=91 Identities=13% Similarity=0.161 Sum_probs=50.0
Q ss_pred CCeEEEEEEeCc-chHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHc---CCEEEEeeeecCCCCCCCccch
Q 008931 29 TDQAYVTLLYGD-EFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKAD---GWIVEKISLLENPNQVRPKRFW 103 (548)
Q Consensus 29 sr~AyVtl~tdd-~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~---g~~v~~I~~I~~p~~~~~~r~~ 103 (548)
++..+|..++|. +|+. -++.||..... .++ ++++.|+-++++.+.+++. ..++ .++..++.. .
T Consensus 5 p~vsViIp~yn~~~~l~---~~l~Sl~~q~~-~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i---~~i~~~n~G----~- 72 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYLD---QCVQALLAQTL-SDIEIILIDDESPDNCPKICDDYAAQYPNI---KVIHKKNAG----L- 72 (240)
T ss_dssp CSEEEEEEESSCTTTHH---HHHHHHHTCSS-SSEEEEEEECCCSSSHHHHHHHHHHHCSSE---EEEECCCCC----H-
T ss_pred CcEEEEEecCCCHHHHH---HHHHHHHhCcC-CCeEEEEEECCCCcCHHHHHHHHHhhCCCE---EEEECCCCC----h-
Confidence 356777667774 4554 56788876532 233 4567776666666666553 2222 223322211 1
Q ss_pred hhhhhhhcccccCccEEEEEcCcccccCC
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
...+=...+..+-|-|++||+|.++..+
T Consensus 73 -~~a~N~g~~~a~g~~i~~lD~Dd~~~~~ 100 (240)
T 3bcv_A 73 -GMACNSGLDVATGEYVAFCDSDDYVDSD 100 (240)
T ss_dssp -HHHHHHHHHHCCSSEEEECCTTCCCCTT
T ss_pred -HHHHHHHHHHcCCCEEEEECCCCcCCHH
Confidence 1112222233456889999999988554
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=64.48 E-value=7.8 Score=42.05 Aligned_cols=99 Identities=13% Similarity=0.085 Sum_probs=55.3
Q ss_pred CCCeEEEEEEeCcchHHHHHHHHHHHHHhCCCCC--EEEEEcCCCCHHH-HHHHHHcCCEEEEeeeecCCCCCCCccchh
Q 008931 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKD--MVVLVSDGVSDYS-KKLLKADGWIVEKISLLENPNQVRPKRFWG 104 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~d--lVvIvtd~ls~e~-~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~ 104 (548)
.++..+|..++|.. +..+.-++.|+.+...... -+|+++|+-++++ .+.|++.......|.++..+... . .
T Consensus 111 ~P~vSVIIp~yNe~-~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~---G--~ 184 (570)
T 2d7i_A 111 LPNTSIIIPFHNEG-WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKRE---G--L 184 (570)
T ss_dssp CCCEEEEEEESSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCC---C--H
T ss_pred CCCeEEEEEECCCC-HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCC---C--H
Confidence 35677776777764 5566678899988754321 2567777666666 56665531000112333332211 0 1
Q ss_pred hhhhhhcccccCccEEEEEcCcccccCC
Q 008931 105 VYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 105 sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
.-.+-...+...-|-|++||+|+++..+
T Consensus 185 ~~A~N~G~~~A~gd~i~fLD~D~~~~p~ 212 (570)
T 2d7i_A 185 IRTRMLGASVATGDVITFLDSHCEANVN 212 (570)
T ss_dssp HHHHHHHHHHCCSSEEEECCSSEEECTT
T ss_pred HHHHHHHHHhcCCCEEEEEcCCcccccc
Confidence 2223333334456889999999998543
No 9
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=61.19 E-value=12 Score=34.82 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=52.1
Q ss_pred CeEEEEEEeCc-chHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHc--CCEEEEeeeecCCCCC---CCccc
Q 008931 30 DQAYVTLLYGD-EFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKAD--GWIVEKISLLENPNQV---RPKRF 102 (548)
Q Consensus 30 r~AyVtl~tdd-~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~--g~~v~~I~~I~~p~~~---~~~r~ 102 (548)
+..+|..++|. +++. -++.|+..... .++ ++++.|+-++++.+.+++. ...+ .++..+... +++..
T Consensus 2 ~vSViIp~yn~~~~l~---~~l~Sl~~q~~-~~~eiivvDd~S~d~t~~~~~~~~~~~~i---~~i~~~~~~~~~~~~n~ 74 (255)
T 1qg8_A 2 KVSVIMTSYNKSDYVA---KSISSILSQTF-SDFELFIMDDNSNEETLNVIRPFLNDNRV---RFYQSDISGVKERTEKT 74 (255)
T ss_dssp CEEEEEEESSCTTTHH---HHHHHHHTCSC-CCEEEEEEECSCCHHHHHHHGGGGGSTTE---EEEECCCCSHHHHHSSC
T ss_pred eEEEEEEcCCCHHHHH---HHHHHHHhccC-CceEEEEEECCCCchHHHHHHHHhhcCCE---EEEeccccccccccccc
Confidence 45566666664 4544 46788876532 233 4577777778888877765 2222 223332100 00010
Q ss_pred hhhhhhhhcccccCccEEEEEcCcccccCC
Q 008931 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 103 ~~sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
.....+=...+..+.|-|+++|+|.++..+
T Consensus 75 G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~ 104 (255)
T 1qg8_A 75 RYAALINQAIEMAEGEYITYATDDNIYMPD 104 (255)
T ss_dssp HHHHHHHHHHHHCCCSEEEEEETTEEECTT
T ss_pred CHHHHHHHHHHHcCCCEEEEeCCCCccChH
Confidence 111222233334567889999999998654
No 10
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=54.95 E-value=50 Score=34.13 Aligned_cols=96 Identities=15% Similarity=0.084 Sum_probs=55.1
Q ss_pred CCCeEEEEEEeCc-chHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHcCCEEEEee--eecCCCCCCCccchh
Q 008931 28 STDQAYVTLLYGD-EFLLGVRVLGKSIRDTGSNKDMVVLVSDGVSDYSKKLLKADGWIVEKIS--LLENPNQVRPKRFWG 104 (548)
Q Consensus 28 ~sr~AyVtl~tdd-~YL~~a~VLi~SL~~~~s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~--~I~~p~~~~~~r~~~ 104 (548)
..+..+|.-++|+ +++..+.-.+.++.+..+...-+++++|+-++.+.+.+++.+.++.... ++..+.. .. .
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n-~G----~ 167 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDA-HG----K 167 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSC-CS----H
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCcc-CC----H
Confidence 3467777777885 5666655555443333222233567888878888888888876653211 1211111 01 1
Q ss_pred hhhhhhcccccCccEEEEEcCccc
Q 008931 105 VYTKLKIFNMTNYKKVVYLDADTI 128 (548)
Q Consensus 105 sy~KL~l~~L~eYdRVLYLDaDtL 128 (548)
...+-...+....|-|+++|+|..
T Consensus 168 g~A~n~G~~~A~gd~i~~lDaD~~ 191 (387)
T 3f1y_A 168 GDAMWRALSVTRGDLVLYIDADTR 191 (387)
T ss_dssp HHHHHHHTTTCCSSEEEECCTTCS
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCC
Confidence 122223334457899999999998
No 11
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=52.94 E-value=23 Score=35.22 Aligned_cols=103 Identities=17% Similarity=0.089 Sum_probs=58.7
Q ss_pred CCCeEEEEEEeCcchHHHHHHHHHHHHHhC-CCCCEEEEEcCCCCHHHHHHHHHcCCEEE-Eeeeec-CCCCCCCccchh
Q 008931 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTG-SNKDMVVLVSDGVSDYSKKLLKADGWIVE-KISLLE-NPNQVRPKRFWG 104 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~-s~~dlVvIvtd~ls~e~~~~Lk~~g~~v~-~I~~I~-~p~~~~~~r~~~ 104 (548)
.++..+|.-++|+. ....-++.|+.... +...-+++++|+-++++.+.+++.+.++. .+..+. .+.. .. .
T Consensus 47 ~~~vSViIp~yN~~--~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n-~G--~-- 119 (329)
T 3ckj_A 47 GRTISVVLPALDEE--DTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIR-PG--K-- 119 (329)
T ss_dssp TCCEEEEEEESSCT--TTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCC-CS--H--
T ss_pred CCcEEEEEeeCCCH--HHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCC-CC--H--
Confidence 35677777777753 22445677887764 22223567778877888888888776642 233331 1111 11 1
Q ss_pred hhhhhhcccccCccEEEEEcCccc-ccCC-chHhh
Q 008931 105 VYTKLKIFNMTNYKKVVYLDADTI-VIKN-IEDLF 137 (548)
Q Consensus 105 sy~KL~l~~L~eYdRVLYLDaDtL-Vl~d-LDeLF 137 (548)
...+-...+..+.|-|+++|+|.+ +..+ +.++.
T Consensus 120 ~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~ 154 (329)
T 3ckj_A 120 GEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLV 154 (329)
T ss_dssp HHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHH
Confidence 111222223346788999999998 5533 44444
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=52.35 E-value=28 Score=37.50 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=53.2
Q ss_pred CeEEEEEEeCcchHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhhhhh
Q 008931 30 DQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGVYTK 108 (548)
Q Consensus 30 r~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~sy~K 108 (548)
+..++..++|. .....-++.|+.......+. +++++|+-++++.+.+++..... .+..+..++.... ....+
T Consensus 94 ~vsviIp~~n~--~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~-~i~~i~~~~~~~g----~~~a~ 166 (625)
T 2z86_A 94 GLSIVIPTYNR--AKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLL-NIKYVRQKDYGYQ----LCAVR 166 (625)
T ss_dssp CEEEEEEESSC--HHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTS-CEEEEEECCCSCC----HHHHH
T ss_pred cEEEEEecCCc--HHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcC-CeEEEEeCCCCcc----hhHHH
Confidence 45566666665 35566788899877433243 45666666666777777752110 1222222221110 11122
Q ss_pred hhcccccCccEEEEEcCcccccCC
Q 008931 109 LKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 109 L~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
=...+..+.|-|+++|+|.++..+
T Consensus 167 N~g~~~a~g~~v~~lD~D~~~~~~ 190 (625)
T 2z86_A 167 NLGLRAAKYNYVAILDCDMAPNPL 190 (625)
T ss_dssp HHHHHHCCSSEEEEECTTEEECTT
T ss_pred HHHHHhCCcCEEEEECCCCCCCHH
Confidence 223334477899999999999654
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=51.79 E-value=54 Score=33.63 Aligned_cols=101 Identities=18% Similarity=0.244 Sum_probs=58.3
Q ss_pred EEEEEEeCcchHHHHHHHHHHHHHhCCC--CCEEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCC----CCccch-h
Q 008931 32 AYVTLLYGDEFLLGVRVLGKSIRDTGSN--KDMVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQV----RPKRFW-G 104 (548)
Q Consensus 32 AyVtl~tdd~YL~~a~VLi~SL~~~~s~--~dlVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~----~~~r~~-~ 104 (548)
+.+.+++|.. . +.-++.||++..+. ...+++..|+-.++.++.+++.+.++..+ ..++.. +++... .
T Consensus 5 pViI~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~---~~~d~~~~~~~~~N~g~~ 78 (343)
T 1fo8_A 5 PILVIACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHI---RQPDLSNIAVQPDHRKFQ 78 (343)
T ss_dssp CEEEEESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEE---ECSCCCCCCCCTTCGGGH
T ss_pred cEEEEECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEE---EcCCccccccchhhcCcc
Confidence 4555566643 3 67788999998632 34566777888888888888754332221 111110 111111 1
Q ss_pred hhhhh---------hcccccCccEEEEEcCcccccCCchHhhc
Q 008931 105 VYTKL---------KIFNMTNYKKVVYLDADTIVIKNIEDLFK 138 (548)
Q Consensus 105 sy~KL---------~l~~L~eYdRVLYLDaDtLVl~dLDeLF~ 138 (548)
.|.|+ .+++..++++||.||-|+++-.|.=+.|+
T Consensus 79 ~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~ 121 (343)
T 1fo8_A 79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQ 121 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHH
T ss_pred cchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHH
Confidence 11111 22333479999999999999887654444
No 14
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=51.24 E-value=26 Score=36.42 Aligned_cols=100 Identities=13% Similarity=0.135 Sum_probs=52.9
Q ss_pred CCCCeEEEEEEeCcchHHHHHHHHHHHHHhCCCCC--EEEEEcCCCCH-HHHHHHHHcCCEEE-EeeeecCCCCCCCccc
Q 008931 27 QSTDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKD--MVVLVSDGVSD-YSKKLLKADGWIVE-KISLLENPNQVRPKRF 102 (548)
Q Consensus 27 ~~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~d--lVvIvtd~ls~-e~~~~Lk~~g~~v~-~I~~I~~p~~~~~~r~ 102 (548)
+.++..+|..++|.. ...+.-++.||.+...... -+|+++|+-++ ++.+.+++...+.. .|.++..+... .
T Consensus 27 ~~p~vSVIIp~yN~~-~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~-G--- 101 (472)
T 1xhb_A 27 NLPTTSVVIVFHNEA-WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRS-G--- 101 (472)
T ss_dssp CCCCEEEEEEESSCC-HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCC-C---
T ss_pred CCCCeEEEEEeCCCC-HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCC-C---
Confidence 445677777777754 2344557889888753321 24566666554 35555554310000 12333332211 1
Q ss_pred hhhhhhhhcccccCccEEEEEcCcccccCC
Q 008931 103 WGVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 103 ~~sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
..-.+-...+....|-|++||+|.++..+
T Consensus 102 -~~~a~N~g~~~A~gd~i~flD~D~~~~p~ 130 (472)
T 1xhb_A 102 -LIRARLKGAAVSRGQVITFLDAHCECTAG 130 (472)
T ss_dssp -HHHHHHHHHHHCCSSEEEEEESSEEECTT
T ss_pred -hHHHHHHHHHhccCCeEEEECCCeEeCcc
Confidence 11222233334457889999999997654
No 15
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=40.34 E-value=42 Score=32.24 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=34.3
Q ss_pred ccCccEEEEEcCcccccC-----CchHhhcchhh---hc---ccCCC-CcccceEEEEeCCHHHHHHH
Q 008931 114 MTNYKKVVYLDADTIVIK-----NIEDLFKCRKF---CA---NLKHS-ERLNSGVMVVEPSAAVFNDM 169 (548)
Q Consensus 114 L~eYdRVLYLDaDtLVl~-----dLDeLF~lp~~---~A---av~~~-~yFNSGVMLInps~~~f~~I 169 (548)
-++-+-+-|||+|++|.+ +++.-.++... .- ...+. -.+|+|+.++..+.-+.+++
T Consensus 70 hPeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~~~lNtGvfL~~~~~~~irnc 137 (213)
T 2p6w_A 70 FPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGVKFVHKDALEIEKI 137 (213)
T ss_dssp CTTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSSSSCCTTEEEEEGGGHHHHHH
T ss_pred CCCceEEEEecCCceeecCCCCCcHHHccccccCceeeccccccccccccccceeeeecccchhhhhc
Confidence 378999999999999993 22222121110 10 11222 35799999998886554444
No 16
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=31.69 E-value=48 Score=32.79 Aligned_cols=90 Identities=8% Similarity=0.144 Sum_probs=50.3
Q ss_pred EEEEEeCcchHHHHHHHHHHHHHhC-CCCC--EE-EEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccch-hhhh
Q 008931 33 YVTLLYGDEFLLGVRVLGKSIRDTG-SNKD--MV-VLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFW-GVYT 107 (548)
Q Consensus 33 yVtl~tdd~YL~~a~VLi~SL~~~~-s~~d--lV-vIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~-~sy~ 107 (548)
..++++ ..|.....-.++|..++- ...+ .+ ++.||+.+.--. .+ ...+.. +. + +..+|. .+..
T Consensus 5 l~vfA~-GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~vp~---~~-~~~v~~---~~-~---~~~~Wqd~sm~ 72 (246)
T 4ayl_A 5 ILYICT-GKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYDE---EN-NKHIHR---IK-Q---KNLGWPDNTLK 72 (246)
T ss_dssp EEEECC-GGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCTTT---TT-CTTEEE---EE-C---CCCCTTHHHHT
T ss_pred EEEEEe-CcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhCCc---CC-CceEEE---Ee-C---CcCCCcccchH
Confidence 344444 467777777888888874 5566 43 366776332100 00 112211 11 1 122343 3555
Q ss_pred hhhccc-----c-cCccEEEEEcCcccccCCch
Q 008931 108 KLKIFN-----M-TNYKKVVYLDADTIVIKNIE 134 (548)
Q Consensus 108 KL~l~~-----L-~eYdRVLYLDaDtLVl~dLD 134 (548)
|+.++. + .|.|=+..+|+|+++.+++.
T Consensus 73 Rm~~i~~~~~~~~~evDyLf~~dvd~~F~~~vG 105 (246)
T 4ayl_A 73 RFHIFLRIKEQLERETDYLFFFNANLLFTSPIG 105 (246)
T ss_dssp HHHHHHTTHHHHHHHCSEEEEECTTEEECSCBC
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCceeeccCC
Confidence 555443 2 35899999999999999875
No 17
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=30.73 E-value=1.2e+02 Score=31.59 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=50.3
Q ss_pred CCCeEEEEEEeCcchHHHHHHHHHHHHHhCCCCC--EEEEEcCCCCHHHHHHHHHcCCEEEEeeeecCCCCCCCccchhh
Q 008931 28 STDQAYVTLLYGDEFLLGVRVLGKSIRDTGSNKD--MVVLVSDGVSDYSKKLLKADGWIVEKISLLENPNQVRPKRFWGV 105 (548)
Q Consensus 28 ~sr~AyVtl~tdd~YL~~a~VLi~SL~~~~s~~d--lVvIvtd~ls~e~~~~Lk~~g~~v~~I~~I~~p~~~~~~r~~~s 105 (548)
.++..+|..++|..- ....-++.|+........ =+|+++|+-++++.+.+.+.... |.++..+.. ....
T Consensus 65 ~p~vSVIIp~yN~~~-~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~---v~vi~~~~n-----~G~~ 135 (501)
T 2ffu_A 65 LPATSVVITFHNEAR-SALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEK---VRVLRNDRR-----EGLM 135 (501)
T ss_dssp CCCEEEEEEESSCCH-HHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTT---EEEEECSSC-----CHHH
T ss_pred CCCEEEEEEeCcCcH-HHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCC---EEEEECCCC-----cCHH
Confidence 446777767777532 134556788887754321 24567666555543322222122 223332211 1112
Q ss_pred hhhhhcccccCccEEEEEcCcccccCC
Q 008931 106 YTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 106 y~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
..+-...+...-|-|++||+|..+..+
T Consensus 136 ~A~N~G~~~A~gd~i~flD~D~~~~p~ 162 (501)
T 2ffu_A 136 RSRVRGADAAQAKVLTFLDSHCECNEH 162 (501)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTT
T ss_pred HHHHHHHHhcCCCEEEEECCCcccCcc
Confidence 233333444567889999999988643
No 18
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=24.79 E-value=57 Score=35.09 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=49.2
Q ss_pred CCeEEEEEEeCc-chHHHHHHHHHHHHHhCCCCCE-EEEEcCCCCHHHHHHHHHc---CCEEEEeeeecCCCCCCCccch
Q 008931 29 TDQAYVTLLYGD-EFLLGVRVLGKSIRDTGSNKDM-VVLVSDGVSDYSKKLLKAD---GWIVEKISLLENPNQVRPKRFW 103 (548)
Q Consensus 29 sr~AyVtl~tdd-~YL~~a~VLi~SL~~~~s~~dl-VvIvtd~ls~e~~~~Lk~~---g~~v~~I~~I~~p~~~~~~r~~ 103 (548)
++..++..++|. +++ .-++.|+.... ..++ +++++|+-++++.+.+++. ...++ ++..++.. ..
T Consensus 375 ~~vsiii~~yn~~~~l---~~~l~s~~~q~-~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~---~~~~~n~G----~~ 443 (625)
T 2z86_A 375 PLVSIYIPAYNCSKYI---VRCVESALNQT-ITDLEVCICDDGSTDDTLRILQEHYANHPRVR---FISQKNKG----IG 443 (625)
T ss_dssp CSEEEEEEESSCTTTH---HHHHHHHHSSS-CCSEEEEEEEESCSSSHHHHHHHHHTTCTTEE---EEEECCCC----HH
T ss_pred CeEEEEEeCCCCHHHH---HHHHHHHHhCc-CCCeEEEEEECcCChhHHHHHHHHHhhCCcEE---EEeCCCCC----HH
Confidence 456777777774 454 45677887653 2233 4566666666666766653 12222 22222211 11
Q ss_pred hhhhhhhcccccCccEEEEEcCcccccCC
Q 008931 104 GVYTKLKIFNMTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 104 ~sy~KL~l~~L~eYdRVLYLDaDtLVl~d 132 (548)
.. +=...+....|=|++||+|.++..+
T Consensus 444 ~a--~n~g~~~a~g~~i~~ld~D~~~~~~ 470 (625)
T 2z86_A 444 SA--SNTAVRLCRGFYIGQLDSDDFLEPD 470 (625)
T ss_dssp HH--HHHHHHHCCSSEEEECCTTCEECTT
T ss_pred HH--HHHHHHhcCCCEEEEECCCcccChh
Confidence 11 1122233456789999999988554
No 19
>2zuq_A Disulfide bond formation protein B; disulfide bond, membrane protein, E. coli, cell inner membrane, cell membrane, chaperone, electron transport, membrane; HET: UQ1; 3.30A {Escherichia coli} PDB: 3e9j_C* 2hi7_B* 2leg_B* 2zup_B* 2k73_A 2k74_A*
Probab=24.46 E-value=2e+02 Score=26.41 Aligned_cols=22 Identities=18% Similarity=0.495 Sum_probs=17.4
Q ss_pred ccccccchhh-hhhhHHHHHHHH
Q 008931 464 QASACDFVTW-YYGMGMALLAVI 485 (548)
Q Consensus 464 ~~~~~~~~~~-~~~~~~~~~~~~ 485 (548)
...+||..+| +-|++|+..+++
T Consensus 126 ~~g~C~~~~w~~lGlsmp~wsli 148 (176)
T 2zuq_A 126 ASGDCAERQWDFLGLEMPQWLLG 148 (176)
T ss_dssp CCCCCCSCCCCSTTSCHHHHHHH
T ss_pred CCCCCccccHHHcCCcHHHHHHH
Confidence 4689999998 569998876654
No 20
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=22.90 E-value=87 Score=35.45 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=15.6
Q ss_pred ccCccEEEEEcCcccccCC
Q 008931 114 MTNYKKVVYLDADTIVIKN 132 (548)
Q Consensus 114 L~eYdRVLYLDaDtLVl~d 132 (548)
..+.|-|+.+|+|+++..|
T Consensus 236 ~a~gd~Il~lDaD~~~~pd 254 (802)
T 4hg6_A 236 RLKGELVVVFDADHVPSRD 254 (802)
T ss_dssp HCCCSEEEECCTTEEECTT
T ss_pred hcCCCEEEEECCCCCcChH
Confidence 3578999999999998654
No 21
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=21.32 E-value=6.7e+02 Score=25.80 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=70.1
Q ss_pred CCCCeEEEEEEeCcchHHHHHHHHHHHHHh-CC--CCCEEEEEcCCCCHHHHHHHHHc--C-CEEEEeee--ecCCCCCC
Q 008931 27 QSTDQAYVTLLYGDEFLLGVRVLGKSIRDT-GS--NKDMVVLVSDGVSDYSKKLLKAD--G-WIVEKISL--LENPNQVR 98 (548)
Q Consensus 27 ~~sr~AyVtl~tdd~YL~~a~VLi~SL~~~-~s--~~dlVvIvtd~ls~e~~~~Lk~~--g-~~v~~I~~--I~~p~~~~ 98 (548)
++.+-++|+++-| .=+.+++-+++|+-+. |. ++|.|++-++..+++.++.+++. | ++...|.. -..|....
T Consensus 25 ~r~nAtfV~L~RN-~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P~~Id 103 (348)
T 1s4n_A 25 GKPKACYVTLVRN-KELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEWIN 103 (348)
T ss_dssp SCCCEEEEEECCG-GGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCCTTSC
T ss_pred CCCceEEEEEecc-HHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCCCCcC
Confidence 4667778877765 4589999999999875 43 57888888888999998888875 2 22222211 11232110
Q ss_pred Cc-------------cch--hhh---hhh---hcc---cccCccEEEEEcCcccccCCch-Hhhcc
Q 008931 99 PK-------------RFW--GVY---TKL---KIF---NMTNYKKVVYLDADTIVIKNIE-DLFKC 139 (548)
Q Consensus 99 ~~-------------r~~--~sy---~KL---~l~---~L~eYdRVLYLDaDtLVl~dLD-eLF~l 139 (548)
.+ .+. .+| .|+ +.| .|.+||=.-=++.|+-+.-||+ +.|..
T Consensus 104 ~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~ 169 (348)
T 1s4n_A 104 QTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKW 169 (348)
T ss_dssp HHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHH
T ss_pred HHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHH
Confidence 00 000 111 111 223 3478999999999999999997 56654
Done!