Query 008934
Match_columns 548
No_of_seqs 170 out of 2147
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 18:23:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008934.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008934hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 8E-46 1.7E-50 398.9 38.2 510 12-533 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 6.8E-39 1.5E-43 329.1 32.6 454 11-529 15-492 (498)
3 PRK10207 dipeptide/tripeptide 100.0 9.9E-37 2.1E-41 327.9 39.6 452 12-530 9-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 1.1E-35 2.5E-40 319.3 39.0 437 13-528 6-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 5.9E-35 1.3E-39 310.3 39.1 437 13-516 5-469 (493)
6 PRK09584 tppB putative tripept 100.0 1.3E-33 2.9E-38 305.0 41.5 455 5-530 10-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 5.8E-27 1.3E-31 257.3 41.8 335 31-401 1-343 (654)
8 PRK05122 major facilitator sup 99.9 3.8E-23 8.2E-28 217.4 38.5 377 16-525 14-390 (399)
9 PRK11646 multidrug resistance 99.9 1.3E-23 2.8E-28 221.4 33.8 373 20-521 13-385 (400)
10 PRK03545 putative arabinose tr 99.9 2.7E-23 5.8E-28 218.1 36.0 376 14-525 6-381 (390)
11 PRK10054 putative transporter; 99.9 3.3E-23 7.2E-28 217.9 35.5 356 14-483 4-359 (395)
12 PRK12382 putative transporter; 99.9 7.9E-23 1.7E-27 214.6 38.1 374 16-523 14-388 (392)
13 PRK14995 methyl viologen resis 99.9 7.1E-23 1.5E-27 221.7 37.7 386 16-482 5-412 (495)
14 PRK10504 putative transporter; 99.9 3.7E-22 7.9E-27 214.7 41.4 397 16-485 9-417 (471)
15 PRK11551 putative 3-hydroxyphe 99.9 4.5E-23 9.8E-28 217.3 32.7 383 12-523 10-395 (406)
16 PRK10489 enterobactin exporter 99.9 5E-23 1.1E-27 218.0 31.3 389 17-534 17-409 (417)
17 PRK09874 drug efflux system pr 99.9 2.1E-21 4.5E-26 204.5 37.3 383 17-527 14-401 (408)
18 PRK10213 nepI ribonucleoside t 99.9 2.3E-21 5E-26 203.9 36.2 186 3-220 6-191 (394)
19 PRK15402 multidrug efflux syst 99.9 3.8E-21 8.3E-26 202.8 37.4 357 16-481 9-368 (406)
20 TIGR00899 2A0120 sugar efflux 99.9 1.4E-21 3E-26 203.1 33.2 367 23-522 3-372 (375)
21 TIGR00900 2A0121 H+ Antiporter 99.9 6.8E-22 1.5E-26 203.9 30.0 350 22-482 4-362 (365)
22 COG2814 AraJ Arabinose efflux 99.9 2.5E-20 5.5E-25 190.4 40.5 381 12-527 8-389 (394)
23 PRK11195 lysophospholipid tran 99.9 1E-20 2.2E-25 198.9 37.1 351 17-482 3-355 (393)
24 TIGR00711 efflux_EmrB drug res 99.9 2.3E-21 5.1E-26 208.9 33.0 394 19-482 4-409 (485)
25 PRK09705 cynX putative cyanate 99.9 6E-21 1.3E-25 200.6 34.6 365 22-527 14-384 (393)
26 TIGR00903 2A0129 major facilit 99.9 2.6E-21 5.5E-26 201.3 31.2 164 29-225 3-166 (368)
27 PRK11663 regulatory protein Uh 99.9 4.7E-21 1E-25 204.1 33.8 169 17-217 23-191 (434)
28 PF07690 MFS_1: Major Facilita 99.9 8.5E-22 1.8E-26 202.3 26.2 170 23-223 2-171 (352)
29 cd06174 MFS The Major Facilita 99.9 2.2E-20 4.8E-25 191.0 35.1 346 21-521 3-349 (352)
30 TIGR00710 efflux_Bcr_CflA drug 99.9 4E-20 8.7E-25 192.7 37.5 178 16-225 4-181 (385)
31 PRK09528 lacY galactoside perm 99.9 9.6E-21 2.1E-25 200.7 32.8 386 16-525 9-404 (420)
32 TIGR00890 2A0111 Oxalate/Forma 99.9 7.7E-21 1.7E-25 196.7 31.4 353 33-517 19-375 (377)
33 PRK10077 xylE D-xylose transpo 99.9 6.7E-21 1.4E-25 205.2 31.5 184 15-219 10-210 (479)
34 PRK10091 MFS transport protein 99.9 2.8E-20 6.1E-25 194.7 35.1 178 17-226 3-180 (382)
35 PF00854 PTR2: POT family; In 99.9 8.5E-23 1.8E-27 213.0 14.9 347 84-464 1-367 (372)
36 TIGR00892 2A0113 monocarboxyla 99.9 4.8E-21 1E-25 205.2 28.5 149 42-222 43-192 (455)
37 PRK03633 putative MFS family t 99.9 7.6E-20 1.6E-24 191.4 36.2 157 16-204 5-161 (381)
38 TIGR00902 2A0127 phenyl propri 99.9 4.4E-20 9.5E-25 193.3 34.2 366 17-519 4-374 (382)
39 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.7E-20 5.9E-25 196.9 32.8 176 15-222 6-187 (412)
40 PRK15011 sugar efflux transpor 99.9 1.8E-19 4E-24 189.3 38.8 179 17-225 15-195 (393)
41 TIGR00893 2A0114 d-galactonate 99.9 4E-20 8.7E-25 192.1 32.2 154 38-222 14-167 (399)
42 PRK12307 putative sialic acid 99.9 1.4E-19 3.1E-24 191.9 36.4 168 13-212 14-181 (426)
43 TIGR00895 2A0115 benzoate tran 99.9 2.6E-20 5.6E-25 194.4 30.3 177 13-221 13-189 (398)
44 PLN00028 nitrate transmembrane 99.9 1.1E-19 2.5E-24 195.7 36.1 175 15-222 34-217 (476)
45 TIGR01299 synapt_SV2 synaptic 99.9 2.5E-19 5.4E-24 199.6 39.0 153 37-220 186-351 (742)
46 PRK03893 putative sialic acid 99.9 1.3E-19 2.8E-24 196.2 36.0 168 13-212 16-183 (496)
47 PRK15403 multidrug efflux syst 99.9 4.1E-19 8.9E-24 187.9 38.3 163 32-226 31-193 (413)
48 TIGR00891 2A0112 putative sial 99.9 6.3E-20 1.4E-24 192.3 31.7 174 12-217 7-182 (405)
49 TIGR00897 2A0118 polyol permea 99.9 3.9E-19 8.5E-24 187.4 37.8 171 13-211 9-180 (402)
50 PRK11652 emrD multidrug resist 99.9 1.7E-19 3.7E-24 189.4 33.9 175 14-220 5-179 (394)
51 PRK03699 putative transporter; 99.9 6.7E-19 1.5E-23 185.1 38.1 174 14-219 4-178 (394)
52 KOG2532 Permease of the major 99.9 8.3E-21 1.8E-25 201.3 23.4 367 46-527 66-450 (466)
53 PRK10642 proline/glycine betai 99.9 6E-19 1.3E-23 190.8 37.8 176 16-215 15-204 (490)
54 PRK09952 shikimate transporter 99.9 3.8E-19 8.3E-24 189.6 34.4 179 13-215 18-211 (438)
55 KOG1330 Sugar transporter/spin 99.9 1.2E-20 2.5E-25 192.2 20.6 179 13-223 29-208 (493)
56 TIGR00882 2A0105 oligosacchari 99.9 5.4E-19 1.2E-23 185.9 33.1 383 17-520 2-391 (396)
57 PRK11102 bicyclomycin/multidru 99.9 8.3E-19 1.8E-23 182.7 34.2 160 32-223 6-165 (377)
58 PRK09556 uhpT sugar phosphate 99.9 1.6E-19 3.4E-24 194.3 29.5 153 41-219 52-207 (467)
59 PRK10473 multidrug efflux syst 99.9 1.6E-18 3.5E-23 181.9 36.3 169 23-223 9-177 (392)
60 PRK11128 putative 3-phenylprop 99.9 5.9E-19 1.3E-23 184.7 32.5 338 25-482 12-354 (382)
61 PRK10406 alpha-ketoglutarate t 99.9 1.7E-18 3.7E-23 184.3 35.9 169 24-216 29-211 (432)
62 PRK11273 glpT sn-glycerol-3-ph 99.9 9E-19 1.9E-23 187.6 33.8 155 39-221 50-205 (452)
63 PRK11043 putative transporter; 99.9 3E-18 6.5E-23 180.4 36.9 162 29-221 15-178 (401)
64 PF05977 MFS_3: Transmembrane 99.9 8E-18 1.7E-22 181.5 40.8 383 17-523 10-393 (524)
65 TIGR00889 2A0110 nucleoside tr 99.9 2.6E-18 5.6E-23 182.1 36.5 394 17-528 2-406 (418)
66 TIGR00894 2A0114euk Na(+)-depe 99.9 1.1E-18 2.4E-23 187.5 33.7 147 47-222 70-217 (465)
67 TIGR00879 SP MFS transporter, 99.8 6.4E-19 1.4E-23 188.2 29.6 150 43-220 53-213 (481)
68 PRK15075 citrate-proton sympor 99.8 8.5E-18 1.8E-22 179.1 35.4 172 16-211 14-199 (434)
69 TIGR00898 2A0119 cation transp 99.8 4.6E-18 9.9E-23 184.6 33.1 144 43-220 114-260 (505)
70 PRK10133 L-fucose transporter; 99.8 1.3E-17 2.7E-22 177.8 35.2 152 17-197 26-177 (438)
71 PRK08633 2-acyl-glycerophospho 99.8 5.3E-18 1.1E-22 201.8 35.9 357 16-481 8-382 (1146)
72 TIGR00887 2A0109 phosphate:H+ 99.8 1.7E-17 3.6E-22 180.2 35.5 182 12-219 11-220 (502)
73 TIGR00712 glpT glycerol-3-phos 99.8 2.7E-18 5.9E-23 183.1 28.9 155 40-222 49-204 (438)
74 TIGR00792 gph sugar (Glycoside 99.8 4.3E-18 9.3E-23 181.1 30.0 353 27-485 9-382 (437)
75 COG2271 UhpC Sugar phosphate p 99.8 6E-19 1.3E-23 178.2 20.5 173 20-223 28-205 (448)
76 PRK15034 nitrate/nitrite trans 99.8 4.7E-17 1E-21 171.9 35.6 384 17-527 34-457 (462)
77 TIGR00881 2A0104 phosphoglycer 99.8 3.2E-18 6.9E-23 177.3 25.8 152 40-222 17-169 (379)
78 PRK06814 acylglycerophosphoeth 99.8 1.3E-17 2.8E-22 198.3 34.1 343 44-481 42-394 (1140)
79 PRK11010 ampG muropeptide tran 99.8 9.8E-17 2.1E-21 173.4 36.9 385 16-524 11-403 (491)
80 TIGR00886 2A0108 nitrite extru 99.8 2.1E-17 4.5E-22 171.3 28.1 166 18-214 2-178 (366)
81 PRK11902 ampG muropeptide tran 99.8 3.4E-16 7.3E-21 165.0 35.5 167 23-219 5-177 (402)
82 TIGR00885 fucP L-fucose:H+ sym 99.8 4.3E-16 9.3E-21 164.6 34.4 173 19-220 5-203 (410)
83 TIGR00896 CynX cyanate transpo 99.8 2E-16 4.3E-21 163.8 31.2 149 34-216 17-167 (355)
84 TIGR00883 2A0106 metabolite-pr 99.8 1.1E-16 2.4E-21 166.6 28.6 157 39-218 14-185 (394)
85 TIGR01301 GPH_sucrose GPH fami 99.8 2.8E-16 6E-21 167.0 31.7 435 19-527 6-474 (477)
86 TIGR00901 2A0125 AmpG-related 99.8 7.3E-17 1.6E-21 167.0 26.5 334 38-467 8-355 (356)
87 PF03825 Nuc_H_symport: Nucleo 99.8 6.7E-16 1.5E-20 161.8 33.3 387 20-527 5-398 (400)
88 PRK09848 glucuronide transport 99.8 3.8E-16 8.3E-21 167.0 31.3 359 23-485 14-390 (448)
89 COG2223 NarK Nitrate/nitrite t 99.8 9.6E-16 2.1E-20 155.4 31.4 395 11-528 8-405 (417)
90 PRK09669 putative symporter Ya 99.8 7.9E-16 1.7E-20 164.4 29.8 358 24-486 16-391 (444)
91 PRK10429 melibiose:sodium symp 99.7 2.3E-15 5E-20 162.1 28.7 359 24-486 13-396 (473)
92 TIGR00806 rfc RFC reduced fola 99.7 4.9E-15 1.1E-19 154.1 29.6 155 36-223 44-202 (511)
93 KOG3764 Vesicular amine transp 99.7 2.6E-16 5.6E-21 157.4 18.7 149 46-224 99-247 (464)
94 TIGR00788 fbt folate/biopterin 99.7 7.4E-15 1.6E-19 157.8 29.1 364 20-484 29-414 (468)
95 TIGR02718 sider_RhtX_FptX side 99.7 4.4E-14 9.5E-19 148.2 33.6 379 19-519 3-386 (390)
96 KOG0569 Permease of the major 99.7 1.7E-14 3.7E-19 151.9 27.0 395 56-534 63-464 (485)
97 PF13347 MFS_2: MFS/sugar tran 99.7 5.6E-15 1.2E-19 157.1 23.7 358 27-486 11-387 (428)
98 KOG2615 Permease of the major 99.7 4.6E-15 1E-19 147.7 20.9 335 49-481 64-412 (451)
99 PF06609 TRI12: Fungal trichot 99.7 1.9E-13 4.2E-18 147.6 34.6 149 39-220 65-213 (599)
100 PRK11462 putative transporter; 99.7 1E-13 2.3E-18 148.7 31.4 180 24-226 16-206 (460)
101 TIGR00805 oat sodium-independe 99.7 8.7E-15 1.9E-19 162.3 23.4 199 16-222 31-279 (633)
102 COG0738 FucP Fucose permease [ 99.6 1.1E-12 2.5E-17 132.4 33.5 146 25-198 20-165 (422)
103 KOG0254 Predicted transporter 99.6 7.7E-13 1.7E-17 144.0 33.3 153 35-219 64-225 (513)
104 KOG2504 Monocarboxylate transp 99.6 8.4E-14 1.8E-18 149.8 24.7 413 20-524 45-476 (509)
105 PF01306 LacY_symp: LacY proto 99.6 3.6E-13 7.9E-18 139.4 27.2 387 17-527 7-403 (412)
106 COG2211 MelB Na+/melibiose sym 99.6 3.2E-12 7E-17 133.7 30.1 361 23-485 18-398 (467)
107 KOG0255 Synaptic vesicle trans 99.6 3.6E-12 7.8E-17 139.1 31.9 141 45-219 110-250 (521)
108 PF11700 ATG22: Vacuole efflux 99.5 5.9E-11 1.3E-15 127.1 37.4 388 32-527 20-471 (477)
109 PF03209 PUCC: PUCC protein; 99.5 2.9E-11 6.2E-16 123.4 33.1 376 44-521 6-395 (403)
110 PTZ00207 hypothetical protein; 99.5 1.7E-10 3.7E-15 125.6 36.9 174 14-218 25-199 (591)
111 KOG0252 Inorganic phosphate tr 99.5 1.5E-12 3.3E-17 132.8 18.0 139 50-212 81-234 (538)
112 PRK15011 sugar efflux transpor 99.5 3.6E-12 7.9E-17 134.0 20.8 175 16-222 215-389 (393)
113 PRK09556 uhpT sugar phosphate 99.5 2E-12 4.4E-17 139.1 18.3 176 17-221 258-446 (467)
114 COG2807 CynX Cyanate permease 99.4 5.4E-10 1.2E-14 111.6 32.6 341 24-485 19-361 (395)
115 PRK10642 proline/glycine betai 99.4 1.1E-11 2.4E-16 134.3 21.6 177 17-222 250-428 (490)
116 cd06174 MFS The Major Facilita 99.4 1.4E-11 3E-16 125.8 19.8 173 17-220 175-348 (352)
117 PRK05122 major facilitator sup 99.4 1.6E-11 3.6E-16 129.0 20.1 167 26-226 225-391 (399)
118 PRK03699 putative transporter; 99.4 1.1E-11 2.3E-16 130.4 18.7 170 17-218 205-374 (394)
119 TIGR00899 2A0120 sugar efflux 99.4 1.8E-11 3.8E-16 127.2 19.9 170 20-221 202-371 (375)
120 TIGR00890 2A0111 Oxalate/Forma 99.4 1.2E-11 2.6E-16 127.8 17.9 170 18-217 206-375 (377)
121 KOG2533 Permease of the major 99.4 5.3E-11 1.1E-15 127.1 23.0 151 45-226 73-229 (495)
122 TIGR00889 2A0110 nucleoside tr 99.4 1.9E-11 4E-16 129.7 19.2 179 19-225 210-403 (418)
123 PRK03545 putative arabinose tr 99.4 5.3E-11 1.1E-15 124.9 21.6 173 19-223 207-379 (390)
124 TIGR01299 synapt_SV2 synaptic 99.4 2.8E-11 6E-16 135.5 19.9 135 56-222 598-732 (742)
125 PRK09952 shikimate transporter 99.4 4.5E-11 9.8E-16 127.6 20.8 176 20-222 253-431 (438)
126 PRK09874 drug efflux system pr 99.4 2.7E-11 5.7E-16 127.5 18.7 169 25-224 227-398 (408)
127 PRK10489 enterobactin exporter 99.4 3.2E-11 7E-16 127.7 19.4 163 33-226 239-401 (417)
128 PRK09705 cynX putative cyanate 99.4 4.7E-11 1E-15 125.6 20.4 177 17-225 205-382 (393)
129 PRK03633 putative MFS family t 99.3 6.3E-11 1.4E-15 123.9 19.9 157 28-219 211-367 (381)
130 PRK11273 glpT sn-glycerol-3-ph 99.3 3.7E-11 8E-16 128.8 18.4 177 17-221 253-432 (452)
131 TIGR00883 2A0106 metabolite-pr 99.3 2E-11 4.3E-16 127.0 15.9 167 18-213 220-390 (394)
132 TIGR00902 2A0127 phenyl propri 99.3 7.7E-11 1.7E-15 123.4 20.1 169 17-219 205-374 (382)
133 PRK09528 lacY galactoside perm 99.3 1.5E-11 3.3E-16 130.3 14.9 165 27-222 233-401 (420)
134 KOG0253 Synaptic vesicle trans 99.3 1.8E-09 3.8E-14 107.6 27.5 157 25-214 85-241 (528)
135 PRK11551 putative 3-hydroxyphe 99.3 6.8E-11 1.5E-15 124.5 19.0 166 24-221 227-393 (406)
136 PF00083 Sugar_tr: Sugar (and 99.3 1E-15 2.2E-20 163.7 -18.0 139 53-219 46-187 (451)
137 TIGR00880 2_A_01_02 Multidrug 99.3 1.1E-11 2.5E-16 108.9 10.6 132 60-222 5-136 (141)
138 KOG2325 Predicted transporter/ 99.3 4.1E-11 9E-16 125.7 16.0 191 8-226 25-231 (488)
139 PRK11663 regulatory protein Uh 99.3 1E-10 2.2E-15 124.7 19.2 177 18-222 244-422 (434)
140 TIGR00891 2A0112 putative sial 99.3 5.6E-11 1.2E-15 124.5 17.0 157 22-208 243-400 (405)
141 PRK12382 putative transporter; 99.3 1E-10 2.3E-15 122.6 18.7 163 26-222 225-387 (392)
142 COG2270 Permeases of the major 99.3 1.9E-09 4.1E-14 110.0 26.3 370 34-523 32-428 (438)
143 PRK03893 putative sialic acid 99.3 8.5E-11 1.8E-15 127.3 17.9 150 35-213 293-442 (496)
144 TIGR00893 2A0114 d-galactonate 99.3 1.1E-10 2.4E-15 121.1 18.0 175 17-220 215-395 (399)
145 COG2271 UhpC Sugar phosphate p 99.3 6E-11 1.3E-15 120.6 14.9 180 17-224 252-434 (448)
146 PF11700 ATG22: Vacuole efflux 99.3 2.7E-10 5.8E-15 122.0 20.5 185 16-223 280-467 (477)
147 TIGR00897 2A0118 polyol permea 99.3 3.2E-10 7E-15 119.6 20.4 176 17-221 222-398 (402)
148 PRK11010 ampG muropeptide tran 99.3 4.3E-10 9.4E-15 121.8 21.1 179 19-224 224-403 (491)
149 PRK10504 putative transporter; 99.3 2.6E-10 5.6E-15 122.7 19.1 158 17-202 261-418 (471)
150 PRK15075 citrate-proton sympor 99.3 2.6E-10 5.6E-15 121.6 18.9 151 25-203 246-398 (434)
151 COG2814 AraJ Arabinose efflux 99.2 8.2E-10 1.8E-14 113.5 20.1 177 17-225 211-387 (394)
152 TIGR00892 2A0113 monocarboxyla 99.2 2.7E-10 5.8E-15 122.3 16.8 173 17-220 241-417 (455)
153 TIGR00879 SP MFS transporter, 99.2 8.3E-10 1.8E-14 117.8 19.9 173 31-225 298-471 (481)
154 COG2223 NarK Nitrate/nitrite t 99.2 3.5E-10 7.6E-15 115.2 15.5 186 16-226 217-403 (417)
155 PRK10406 alpha-ketoglutarate t 99.2 1.3E-09 2.9E-14 116.0 20.2 167 27-222 253-422 (432)
156 KOG2563 Permease of the major 99.2 3.9E-09 8.4E-14 108.3 22.2 135 38-198 65-201 (480)
157 TIGR00900 2A0121 H+ Antiporter 99.2 9.3E-10 2E-14 113.3 17.9 155 17-201 210-365 (365)
158 KOG4686 Predicted sugar transp 99.2 2.3E-10 5E-15 109.9 11.6 372 36-523 62-442 (459)
159 TIGR00712 glpT glycerol-3-phos 99.2 6.6E-10 1.4E-14 118.6 16.5 177 18-223 252-432 (438)
160 PRK10091 MFS transport protein 99.2 1.7E-09 3.8E-14 113.1 19.3 174 19-223 201-375 (382)
161 PF03092 BT1: BT1 family; Int 99.2 2.8E-08 6.1E-13 105.7 28.7 162 39-225 11-176 (433)
162 TIGR02718 sider_RhtX_FptX side 99.2 2.2E-09 4.7E-14 112.6 19.9 176 18-218 209-385 (390)
163 PRK11128 putative 3-phenylprop 99.2 2.2E-09 4.7E-14 112.4 19.8 168 17-218 205-373 (382)
164 PRK14995 methyl viologen resis 99.2 8.2E-10 1.8E-14 119.8 17.0 154 17-198 259-412 (495)
165 PRK15402 multidrug efflux syst 99.1 4.4E-09 9.6E-14 110.9 21.7 172 18-216 216-387 (406)
166 TIGR00792 gph sugar (Glycoside 99.1 5.1E-10 1.1E-14 119.0 14.5 163 17-203 222-384 (437)
167 PRK11902 ampG muropeptide tran 99.1 4.9E-09 1.1E-13 110.5 20.9 174 19-223 211-389 (402)
168 KOG2816 Predicted transporter 99.1 4.4E-08 9.6E-13 104.1 27.9 359 22-485 23-394 (463)
169 TIGR00711 efflux_EmrB drug res 99.1 1.5E-09 3.3E-14 116.9 17.2 156 17-199 255-410 (485)
170 TIGR01272 gluP glucose/galacto 99.1 2.5E-09 5.5E-14 108.7 17.7 162 17-212 140-303 (310)
171 KOG4686 Predicted sugar transp 99.1 1.9E-09 4.1E-14 103.7 15.2 165 14-211 261-429 (459)
172 PRK12307 putative sialic acid 99.1 3.7E-09 8E-14 112.1 19.3 146 32-207 246-391 (426)
173 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.8E-09 3.8E-14 114.4 16.6 164 18-212 243-409 (412)
174 PLN00028 nitrate transmembrane 99.1 2.6E-09 5.6E-14 115.3 17.2 173 19-224 254-433 (476)
175 PF05977 MFS_3: Transmembrane 99.1 5.5E-09 1.2E-13 113.2 19.5 173 19-222 220-392 (524)
176 TIGR00882 2A0105 oligosacchari 99.1 3.9E-09 8.4E-14 111.0 17.7 172 17-219 215-390 (396)
177 TIGR00896 CynX cyanate transpo 99.1 3.8E-09 8.3E-14 109.2 17.2 157 17-204 197-354 (355)
178 TIGR00881 2A0104 phosphoglycer 99.1 3E-09 6.4E-14 110.0 16.2 162 17-206 216-379 (379)
179 TIGR00895 2A0115 benzoate tran 99.1 3.5E-09 7.6E-14 110.4 16.8 147 18-196 251-397 (398)
180 PRK10054 putative transporter; 99.1 3.4E-09 7.3E-14 111.6 16.5 174 17-221 206-381 (395)
181 PRK10213 nepI ribonucleoside t 99.1 1.6E-08 3.4E-13 106.4 21.1 168 17-217 216-384 (394)
182 PRK09848 glucuronide transport 99.1 1.8E-09 3.8E-14 115.6 13.9 164 17-202 228-391 (448)
183 PRK10133 L-fucose transporter; 99.0 7.2E-09 1.6E-13 110.6 18.1 167 17-217 258-426 (438)
184 PRK11195 lysophospholipid tran 99.0 1.6E-08 3.5E-13 106.3 19.8 163 28-222 216-378 (393)
185 TIGR00894 2A0114euk Na(+)-depe 99.0 1E-08 2.3E-13 110.2 18.6 177 17-222 261-448 (465)
186 PRK10077 xylE D-xylose transpo 99.0 2.1E-08 4.5E-13 108.1 20.9 162 35-224 289-457 (479)
187 TIGR01272 gluP glucose/galacto 99.0 2.7E-08 5.9E-13 101.1 20.5 82 129-217 9-106 (310)
188 PRK11646 multidrug resistance 99.0 8.6E-09 1.9E-13 108.7 17.4 154 35-219 226-383 (400)
189 PRK15034 nitrate/nitrite trans 99.0 1.7E-08 3.7E-13 107.1 19.0 187 17-223 252-453 (462)
190 PF13347 MFS_2: MFS/sugar tran 99.0 1E-08 2.2E-13 109.1 17.4 164 17-203 225-388 (428)
191 COG2270 Permeases of the major 99.0 1.2E-08 2.5E-13 104.3 15.3 173 17-220 252-425 (438)
192 TIGR00710 efflux_Bcr_CflA drug 99.0 4.2E-08 9.1E-13 102.1 19.9 160 19-206 208-368 (385)
193 PRK08633 2-acyl-glycerophospho 99.0 1.7E-08 3.6E-13 120.6 19.1 164 18-212 233-398 (1146)
194 TIGR00887 2A0109 phosphate:H+ 99.0 1.4E-08 2.9E-13 110.5 16.5 167 25-219 296-484 (502)
195 PRK06814 acylglycerophosphoeth 98.9 1.7E-08 3.8E-13 120.5 17.5 180 17-212 225-410 (1140)
196 TIGR00901 2A0125 AmpG-related 98.9 3.4E-08 7.5E-13 102.1 15.1 144 19-183 211-355 (356)
197 TIGR00903 2A0129 major facilit 98.9 9.7E-08 2.1E-12 99.5 17.9 166 17-220 192-361 (368)
198 KOG3626 Organic anion transpor 98.9 2.6E-07 5.6E-12 101.3 21.5 206 16-229 95-348 (735)
199 PRK09669 putative symporter Ya 98.9 3.7E-08 8E-13 105.3 15.0 164 17-203 229-392 (444)
200 KOG2504 Monocarboxylate transp 98.8 3E-08 6.6E-13 107.0 14.0 176 17-224 298-476 (509)
201 PRK10473 multidrug efflux syst 98.8 2E-07 4.3E-12 97.8 19.9 145 31-211 217-361 (392)
202 PRK11102 bicyclomycin/multidru 98.8 2E-07 4.3E-12 97.0 19.7 148 19-194 196-344 (377)
203 PF05631 DUF791: Protein of un 98.8 4.2E-06 9.2E-11 84.6 27.4 155 45-226 61-218 (354)
204 TIGR00898 2A0119 cation transp 98.8 6E-08 1.3E-12 105.3 15.4 142 46-221 351-492 (505)
205 PF07690 MFS_1: Major Facilita 98.8 6.4E-08 1.4E-12 99.1 13.5 141 22-190 211-352 (352)
206 COG2807 CynX Cyanate permease 98.8 3.5E-07 7.5E-12 91.8 17.8 168 17-215 208-376 (395)
207 PF03137 OATP: Organic Anion T 98.8 8.3E-10 1.8E-14 119.9 -0.9 188 31-230 16-256 (539)
208 PRK11043 putative transporter; 98.8 6E-07 1.3E-11 94.4 20.7 152 25-204 211-362 (401)
209 PRK10429 melibiose:sodium symp 98.7 1.6E-07 3.5E-12 101.3 13.7 166 17-202 231-396 (473)
210 KOG0253 Synaptic vesicle trans 98.7 3.8E-07 8.3E-12 91.2 14.7 173 17-222 326-517 (528)
211 PF03825 Nuc_H_symport: Nucleo 98.7 1.7E-06 3.8E-11 90.9 20.2 180 17-222 207-393 (400)
212 KOG3762 Predicted transporter 98.7 3.6E-06 7.9E-11 88.3 21.4 124 359-523 422-546 (618)
213 TIGR00885 fucP L-fucose:H+ sym 98.6 1.2E-06 2.6E-11 92.7 17.7 164 17-214 232-402 (410)
214 COG2211 MelB Na+/melibiose sym 98.6 1.3E-06 2.8E-11 91.9 16.1 165 17-203 236-400 (467)
215 TIGR00886 2A0108 nitrite extru 98.6 5.7E-07 1.2E-11 93.0 12.6 140 18-185 226-365 (366)
216 PRK11652 emrD multidrug resist 98.5 5.8E-06 1.3E-10 86.7 20.1 143 32-203 222-364 (394)
217 KOG2532 Permease of the major 98.5 1.5E-06 3.3E-11 92.8 15.4 179 17-223 258-446 (466)
218 TIGR00924 yjdL_sub1_fam amino 98.5 2.6E-06 5.7E-11 91.9 16.7 186 19-225 274-469 (475)
219 KOG0569 Permease of the major 98.5 5E-06 1.1E-10 88.3 17.7 189 18-230 270-460 (485)
220 KOG3098 Uncharacterized conser 98.5 6.9E-05 1.5E-09 79.1 25.8 326 59-479 56-410 (461)
221 PRK15403 multidrug efflux syst 98.5 7.6E-06 1.6E-10 86.7 19.0 172 17-217 218-390 (413)
222 PF01306 LacY_symp: LacY proto 98.5 4.7E-06 1E-10 86.8 16.5 178 16-224 219-400 (412)
223 TIGR00880 2_A_01_02 Multidrug 98.4 5.6E-06 1.2E-10 72.2 14.0 120 363-523 18-137 (141)
224 KOG1330 Sugar transporter/spin 98.4 1.5E-07 3.3E-12 97.0 3.3 129 359-527 84-212 (493)
225 PRK11462 putative transporter; 98.4 8.5E-06 1.8E-10 87.6 16.5 162 18-202 229-390 (460)
226 PF06813 Nodulin-like: Nodulin 98.3 3E-05 6.6E-10 75.6 17.6 155 16-198 2-156 (250)
227 COG0477 ProP Permeases of the 98.3 4.1E-05 8.9E-10 75.3 17.8 153 31-212 16-173 (338)
228 KOG4332 Predicted sugar transp 98.2 1.4E-05 3.1E-10 76.8 12.0 318 42-463 61-386 (454)
229 PF03209 PUCC: PUCC protein; 98.2 0.00011 2.5E-09 75.5 18.7 167 27-220 218-394 (403)
230 PRK09584 tppB putative tripept 98.2 4.2E-05 9.2E-10 83.1 16.7 180 24-225 279-480 (500)
231 KOG3764 Vesicular amine transp 98.2 6.4E-06 1.4E-10 83.6 9.2 135 354-529 117-252 (464)
232 PRK10207 dipeptide/tripeptide 98.1 6.2E-05 1.3E-09 81.5 16.4 178 26-225 278-477 (489)
233 COG0738 FucP Fucose permease [ 98.1 7.9E-05 1.7E-09 76.2 15.8 157 17-207 236-392 (422)
234 TIGR00788 fbt folate/biopterin 98.1 1.1E-05 2.4E-10 86.9 9.9 147 44-211 279-430 (468)
235 PF12832 MFS_1_like: MFS_1 lik 98.1 2.5E-05 5.4E-10 61.7 9.3 68 24-93 7-74 (77)
236 KOG3762 Predicted transporter 98.1 1.3E-05 2.7E-10 84.4 9.0 167 24-222 378-545 (618)
237 TIGR00806 rfc RFC reduced fola 98.0 0.0002 4.4E-09 75.6 16.9 115 373-524 89-203 (511)
238 TIGR01301 GPH_sucrose GPH fami 98.0 0.00019 4.1E-09 77.0 17.0 206 13-226 254-473 (477)
239 PF01770 Folate_carrier: Reduc 98.0 0.011 2.4E-07 61.7 28.8 154 38-223 24-181 (412)
240 KOG2533 Permease of the major 97.9 7.8E-05 1.7E-09 80.1 10.6 164 17-209 273-441 (495)
241 TIGR00805 oat sodium-independe 97.7 0.00016 3.5E-09 80.8 9.6 111 373-483 95-234 (633)
242 KOG0254 Predicted transporter 97.6 0.0018 3.8E-08 70.7 17.0 192 15-226 292-485 (513)
243 PRK15462 dipeptide/tripeptide 97.6 0.00095 2.1E-08 71.9 14.4 125 362-526 64-191 (493)
244 PF06963 FPN1: Ferroportin1 (F 97.6 0.13 2.9E-06 54.4 31.4 390 20-477 5-412 (432)
245 PF06609 TRI12: Fungal trichot 97.6 0.0014 3.1E-08 71.7 14.7 163 3-195 297-463 (599)
246 PF00083 Sugar_tr: Sugar (and 97.5 4.6E-07 9.9E-12 96.9 -12.6 184 18-226 253-438 (451)
247 TIGR00769 AAA ADP/ATP carrier 97.5 0.21 4.6E-06 53.6 32.4 169 15-197 5-189 (472)
248 PTZ00207 hypothetical protein; 97.4 0.0013 2.8E-08 72.2 12.4 123 363-523 81-204 (591)
249 PF06779 DUF1228: Protein of u 97.3 0.0024 5.1E-08 51.1 9.8 67 37-105 12-78 (85)
250 PF02487 CLN3: CLN3 protein; 97.3 0.3 6.5E-06 51.1 26.8 60 420-479 334-393 (402)
251 KOG0252 Inorganic phosphate tr 97.2 0.00039 8.4E-09 72.2 5.2 179 17-223 304-497 (538)
252 KOG0637 Sucrose transporter an 97.1 0.00044 9.5E-09 71.8 4.4 167 17-196 32-202 (498)
253 KOG2615 Permease of the major 97.1 0.0074 1.6E-07 61.5 12.6 152 18-199 261-414 (451)
254 KOG2816 Predicted transporter 96.8 0.014 3.1E-07 62.3 12.6 128 39-198 263-391 (463)
255 PF05978 UNC-93: Ion channel r 96.7 0.056 1.2E-06 48.9 14.0 106 59-196 43-148 (156)
256 KOG2563 Permease of the major 96.6 0.016 3.6E-07 60.3 10.8 183 17-227 266-453 (480)
257 KOG3574 Acetyl-CoA transporter 96.4 0.71 1.5E-05 47.4 20.8 156 14-192 28-188 (510)
258 KOG0255 Synaptic vesicle trans 96.4 0.16 3.4E-06 55.5 18.0 149 46-226 346-494 (521)
259 KOG2325 Predicted transporter/ 96.1 0.081 1.7E-06 56.4 13.1 135 375-530 101-235 (488)
260 PF00854 PTR2: POT family; In 96.0 0.045 9.7E-07 57.0 10.3 124 378-530 3-129 (372)
261 PF03137 OATP: Organic Anion T 95.8 0.0016 3.6E-08 71.1 -1.4 151 373-529 65-255 (539)
262 KOG3626 Organic anion transpor 95.6 0.08 1.7E-06 59.0 10.7 152 373-530 159-349 (735)
263 PF05978 UNC-93: Ion channel r 95.5 0.3 6.5E-06 44.1 12.5 85 373-480 64-148 (156)
264 PRK03612 spermidine synthase; 95.4 1.2 2.5E-05 48.8 18.8 159 25-211 22-184 (521)
265 PF06813 Nodulin-like: Nodulin 95.2 0.29 6.3E-06 47.9 12.1 91 373-479 63-153 (250)
266 PF06963 FPN1: Ferroportin1 (F 94.8 1.5 3.2E-05 46.6 17.0 138 34-193 275-412 (432)
267 PF03092 BT1: BT1 family; Int 94.7 0.37 8E-06 51.4 12.4 118 374-526 57-177 (433)
268 KOG3810 Micronutrient transpor 94.5 0.93 2E-05 46.1 13.5 122 377-528 304-425 (433)
269 COG3104 PTR2 Dipeptide/tripept 94.3 0.92 2E-05 48.3 13.9 152 50-225 324-488 (498)
270 TIGR00926 2A1704 Peptide:H+ sy 93.8 1.4 3E-05 49.6 15.0 132 373-528 51-186 (654)
271 PF01770 Folate_carrier: Reduc 92.2 7.4 0.00016 40.9 16.6 113 376-525 71-183 (412)
272 KOG4332 Predicted sugar transp 88.6 6.1 0.00013 38.9 11.2 139 55-218 284-425 (454)
273 TIGR00769 AAA ADP/ATP carrier 87.3 25 0.00053 37.9 16.2 59 424-482 131-190 (472)
274 KOG3098 Uncharacterized conser 87.0 24 0.00053 37.7 15.7 132 45-192 270-407 (461)
275 PF02487 CLN3: CLN3 protein; 85.4 8.6 0.00019 40.4 11.2 62 129-197 334-395 (402)
276 PF03219 TLC: TLC ATP/ADP tran 84.1 68 0.0015 34.8 25.5 135 51-198 56-205 (491)
277 COG0477 ProP Permeases of the 82.9 21 0.00045 34.2 12.5 62 420-481 93-156 (338)
278 KOG0637 Sucrose transporter an 79.8 3 6.6E-05 44.0 5.3 128 339-478 71-200 (498)
279 KOG1479 Nucleoside transporter 78.3 94 0.002 32.7 26.7 58 420-477 342-399 (406)
280 PF13000 Acatn: Acetyl-coenzym 73.4 38 0.00082 36.6 11.3 44 436-479 133-176 (544)
281 TIGR00939 2a57 Equilibrative N 70.6 38 0.00083 36.1 10.9 92 420-524 105-196 (437)
282 KOG3574 Acetyl-CoA transporter 69.9 35 0.00075 35.6 9.6 53 424-476 136-188 (510)
283 PF05631 DUF791: Protein of un 69.1 1.5E+02 0.0032 30.7 16.2 27 420-446 120-146 (354)
284 TIGR00939 2a57 Equilibrative N 68.4 46 0.00099 35.5 10.9 57 129-192 371-427 (437)
285 COG5336 Uncharacterized protei 66.0 25 0.00053 29.3 6.3 42 56-97 45-86 (116)
286 KOG3097 Predicted membrane pro 55.0 1.1E+02 0.0024 31.3 9.9 117 12-160 24-140 (390)
287 PF09527 ATPase_gene1: Putativ 52.0 67 0.0015 23.1 6.1 38 60-97 7-44 (55)
288 KOG1479 Nucleoside transporter 50.6 99 0.0021 32.5 9.3 150 17-190 242-396 (406)
289 PF13000 Acatn: Acetyl-coenzym 50.1 3.3E+02 0.0072 29.7 13.1 57 137-200 412-468 (544)
290 KOG4830 Predicted sugar transp 47.9 29 0.00064 34.1 4.6 74 11-87 12-94 (412)
291 KOG3880 Predicted small molecu 47.6 1.1E+02 0.0023 31.2 8.5 357 18-477 16-398 (409)
292 COG3202 ATP/ADP translocase [E 47.5 4E+02 0.0087 28.9 27.8 167 14-199 24-210 (509)
293 KOG1237 H+/oligopeptide sympor 40.6 1E+02 0.0022 34.1 8.1 68 126-200 454-521 (571)
294 PF03219 TLC: TLC ATP/ADP tran 38.8 5.4E+02 0.012 27.9 15.4 42 441-482 164-205 (491)
295 PF06645 SPC12: Microsomal sig 38.2 84 0.0018 24.6 5.0 50 177-229 12-61 (76)
296 PF07857 DUF1632: CEO family ( 37.4 2.4E+02 0.0053 27.6 9.3 26 454-479 76-101 (254)
297 COG5336 Uncharacterized protei 32.0 2.2E+02 0.0047 23.9 6.6 33 450-482 35-67 (116)
298 COG3202 ATP/ADP translocase [E 27.7 8.2E+02 0.018 26.6 12.6 41 441-481 168-208 (509)
299 KOG2601 Iron transporter [Inor 27.6 7.5E+02 0.016 26.1 15.8 58 417-474 382-439 (503)
300 PF09930 DUF2162: Predicted tr 25.9 4E+02 0.0087 25.6 8.4 67 39-109 117-183 (224)
301 KOG3810 Micronutrient transpor 24.6 3.5E+02 0.0076 28.2 8.0 84 56-161 274-357 (433)
302 TIGR02230 ATPase_gene1 F0F1-AT 23.6 3.1E+02 0.0067 22.7 6.2 30 63-92 52-81 (100)
303 PRK03612 spermidine synthase; 23.0 1E+03 0.022 26.0 14.7 52 429-481 118-169 (521)
304 PF12606 RELT: Tumour necrosis 22.9 1.7E+02 0.0037 20.9 3.9 10 523-532 23-32 (50)
305 PRK14228 camphor resistance pr 22.1 5.1E+02 0.011 22.2 8.9 96 59-184 10-105 (122)
306 PF06027 DUF914: Eukaryotic pr 21.0 5E+02 0.011 26.6 8.6 25 503-527 286-310 (334)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-46 Score=398.89 Aligned_cols=510 Identities=39% Similarity=0.690 Sum_probs=449.2
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
+.+.|+++.++++.+.+|++++|++...+..|+++++|.+...+.-..+.|.......++++++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCc--ccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccch
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPAC--DQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKG 169 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
++..+|..++..+.++|.+.++.| ..-.+.|...+..+...+..++.+.++|.|+.+|+..++.+||+++.++.++ .
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~-~ 190 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV-K 190 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh-h
Confidence 999999999999988999888877 2223357777878888999999999999999999999999999996665444 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHh
Q 008934 170 ALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFK 249 (548)
Q Consensus 170 ~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (548)
.+.+.|+|+|...+.|..++-.+..++.+..||...|.++.++.++++++++...+.|+.++|.++++..+.++++.+.+
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~ 270 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAF 270 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHH
Confidence 56699999999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred hccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHH--------
Q 008934 250 NRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIK-------- 321 (548)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 321 (548)
+++...+. +.++................++++|++++....+. .++....+|.+|+.+++|+.+..++
T Consensus 271 k~~~~~~~-~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~---~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 271 KRKAVVSL-DPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDL---KDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HHhccCCC-cchhccccccccccccCCcccchhhHhhccCCccc---ccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 99887775 32222111112222334567889999887755433 3455678899999999999999888
Q ss_pred -----------------HhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHH
Q 008934 322 -----------------ASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLL 384 (548)
Q Consensus 322 -----------------~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~ 384 (548)
+.+||+++++++.+|++.++.+..+.+++..|++++...|+.+|+.++++..+...++.+|++
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~ 426 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV 426 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence 778899988569999999999999999999999999999999999886545789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHH
Q 008934 385 FSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGA 464 (548)
Q Consensus 385 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 464 (548)
+..+++...+..+.+|++.... +..+.+++|++|++++|++.|++|.+..++.+|+.++++|++||+.+++++.+
T Consensus 427 ~si~sm~~aa~vE~krl~~~~~-----~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~ 501 (571)
T KOG1237|consen 427 LSILSMAVAGIVEAKRLKTAVS-----LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLL 501 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh-----ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHH
Confidence 9999999999999999888766 22334788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCCCC-CCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcccccCCC
Q 008934 465 GLSAANLVASLIMNAVDDITKRGGNGGWIP-SNINKGHYDYYYWLLTALSMANFLYYLACCKAYGPFKGR 533 (548)
Q Consensus 465 ~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~ 533 (548)
..++|+.+..++...+...++. .++|+. +|+|+++.+++||+++....++...|..+.++++.++.+
T Consensus 502 t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 502 TVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 9999999999999998876643 568999 899999999999999999999999999898888765443
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-39 Score=329.11 Aligned_cols=454 Identities=19% Similarity=0.217 Sum_probs=335.0
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhc----CChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHH
Q 008934 11 NPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYN----METTAATNIIFIWTAATNFLPIVGALLADSYVGRYRM 86 (548)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg----~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~ 86 (548)
..-+|+|.++.++.+|++||++|||+...+..|++.+++ ++++++.-+.+.|....++.+++|||++||++|+||+
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 345689999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCc
Q 008934 87 IGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTK 166 (548)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 166 (548)
+.+|.+++++|.+.++.++ ......+.++.+++++|+|+.+|+..++++|++|++|+
T Consensus 95 I~lGail~~iGh~~L~~~~---------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp-- 151 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS---------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP-- 151 (498)
T ss_pred HHHHHHHHHHHHHHHhccc---------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc--
Confidence 9999999999999998652 01456799999999999999999999999999999995
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCC--CCCCch------
Q 008934 167 SKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKA--NTSLLP------ 238 (548)
Q Consensus 167 ~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~------ 238 (548)
+|..+++.+|.+.|+|+.++|.+.+++.+.+||+..|..+++.+.++++.++..+++...... ...++.
T Consensus 152 ---rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~ 228 (498)
T COG3104 152 ---RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLP 228 (498)
T ss_pred ---ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhh
Confidence 389999999999999999999999999999999999999999999999998888766544321 112211
Q ss_pred hHHHHHHHHHhhc--cCCCCC---c-------chhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCc
Q 008934 239 GLTQVLVASFKNR--RTKLPT---Q-------ATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNS 306 (548)
Q Consensus 239 ~~~~~~~~~~~~~--~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (548)
.....+...+... .....+ . ..+..+..+.+.......+.-+.+....... ...++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl----------~~~iFW~ 298 (498)
T COG3104 229 VLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFL----------FAVIFWA 298 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHH----------HHHHHHH
Confidence 1111111111110 000000 0 0000000000000000000000000000000 0123443
Q ss_pred cchHHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHH
Q 008934 307 LCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFS 386 (548)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~ 386 (548)
+ .+|..+....+..+..+++.. ++++|++++|++|++.++++.|+.+.+.+|+.++. | +++...|+..|+.++
T Consensus 299 ~--~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~--~--~ps~~~KFalGl~l~ 371 (498)
T COG3104 299 L--YEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN--K--QPSTPIKFALGLILA 371 (498)
T ss_pred H--HHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC--C--CCCcchHHHHHHHHH
Confidence 3 355555555556677777733 49999999999999999999999777777665543 2 389999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHH
Q 008934 387 TASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGL 466 (548)
Q Consensus 387 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 466 (548)
+.+++.+........ .+..++|.||+++.|+++++||.+.+|..++++++++|+.+++..+|++.+..
T Consensus 372 g~~fl~l~~~~~~~~------------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~ 439 (498)
T COG3104 372 GLGFLILLLAGIWFG------------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTV 439 (498)
T ss_pred HHHHHHHHHHHHhhc------------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 999999987742211 11356799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 008934 467 SAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGP 529 (548)
Q Consensus 467 ~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~ 529 (548)
..|+.++..+.+.-.. +. +..+...+...|+..+.+.++..++.....++.++
T Consensus 440 a~~~~l~g~va~~~~~-~~---------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r 492 (498)
T COG3104 440 AAGQTLGGQVAGLTAV-TD---------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNR 492 (498)
T ss_pred HHHHHhhceecccccc-cc---------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999998888773110 00 00112245677888888887777766666555544
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=9.9e-37 Score=327.92 Aligned_cols=452 Identities=12% Similarity=0.145 Sum_probs=313.8
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
.++|||.++.++..+++||+++|++.+++++|+++++|++..+++++.+.+....++.++++|+++||++||||++.++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999449999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
+++.++++++.++.+ ....++++|+++++|.|...|+..++++|++|+++ ++|
T Consensus 89 ~~~~~g~~~~~~~~~----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~-----~~~ 141 (489)
T PRK10207 89 IVLAIGYFMTGMSLL----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD-----PRL 141 (489)
T ss_pred HHHHHHHHHHHHhcc----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc-----hhh
Confidence 999999999887541 12345678999999999999999999999999866 237
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceecc--CCCCCCchhHHHHH-----
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKS--KANTSLLPGLTQVL----- 244 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----- 244 (548)
+++++++|+..|+|..+||.+++++.+++||++.|++.++..+++++.+...++.+++. ++.+++.+.....+
T Consensus 142 ~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~ 221 (489)
T PRK10207 142 DGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS 221 (489)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH
Confidence 88999999999999999999999999999999999998776666665555554443332 22222221111000
Q ss_pred ---HHHHhhccCCCCCcchhh-----------hh-hcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccch
Q 008934 245 ---VASFKNRRTKLPTQATEE-----------MY-HHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCT 309 (548)
Q Consensus 245 ---~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (548)
........... . .... .+ .++...+.+ ...+-+....+... ...+|. .
T Consensus 222 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~i~~~~f~~~~~~~~~~---~r~r~~~~~~l~~~----------~~~f~~--~ 284 (489)
T PRK10207 222 VVMIFVCAWLMHNV-E-VANLVLIVLSIVVTIIFFREAFKLDKT---GRNKMFVAFVLMLE----------AVVFYI--L 284 (489)
T ss_pred HHHHHHHHHHHhhh-h-HHHHHHHHHHHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHH----------HHHHHH--H
Confidence 00000000000 0 0000 00 000000000 00000000000000 001111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHH
Q 008934 310 VEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTAS 389 (548)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~ 389 (548)
.+|......++..+.++.... ++.+++++++++|++.+++..|+.+ .+++|+.+|+.++++..++.+|+++.+++
T Consensus 285 ~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~----~l~~rl~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 285 YAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILA----GIYTHLGSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHH----HHHHHHhhCCCCCCcHHHHHHHHHHHHHH
Confidence 223222233322334555443 6789999999999999999999854 44556555543478999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHH
Q 008934 390 MTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAA 469 (548)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g 469 (548)
++.++...... .+. ..+++.||+++.+++.++||++.+|+.++++++.+|++++|.++|++++.+++|
T Consensus 360 ~~~~~~~~~~~---------~~~---~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig 427 (489)
T PRK10207 360 FLTAAAAGMWF---------ADA---QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAA 427 (489)
T ss_pred HHHHHHHHHhh---------cCC---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 87765433100 000 123578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008934 470 NLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGPF 530 (548)
Q Consensus 470 ~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 530 (548)
+.+|..+...... .. ...... ..++.+..+|..+++++++..++++++.++.++.
T Consensus 428 ~~lg~~l~~~~~~-~~-~~~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 428 FLLGGYVATFTAV-PD-NITDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHhcc-cc-ccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876531 00 000000 0123467788888888887777777776666554
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=1.1e-35 Score=319.27 Aligned_cols=437 Identities=15% Similarity=0.163 Sum_probs=313.3
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCRE--YNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFG 90 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (548)
.+++|.++.++..+++|++++|++.++++.|++++ +|+++.+++++.+.+.++..++++++|+++||++||||++.++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 46789999999999999999999999999999988 9999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchh
Q 008934 91 CFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGA 170 (548)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (548)
.++.+++.+++++++ +.+.+.+++.+.|+|.|...|+..++++|++|++++ ++
T Consensus 86 ~~~~~~g~~~~~~~~-----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~----~~ 138 (475)
T TIGR00924 86 GIVLMLGHFMLAMSI-----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM----PR 138 (475)
T ss_pred HHHHHHHHHHHHhcc-----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc----cc
Confidence 999999988888654 456788899999999999999999999999997653 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchh----HHH----
Q 008934 171 LQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPG----LTQ---- 242 (548)
Q Consensus 171 r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~---- 242 (548)
|+++++++|+..|+|+++||.+++++.+++||++.|.+.++..+++.+.+...++.+++.++++++.++ ..+
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA 218 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence 788999999999999999999999999989999999998877776666655555444322221111110 000
Q ss_pred ---HHHHHHhhccCCCCCcchhhh---------------hhcCCCCcccCCcc--hhhhHHhhhhhcCCCCCCCCCCCCC
Q 008934 243 ---VLVASFKNRRTKLPTQATEEM---------------YHHGKGSMRLMPSE--NLRFLNKACMAKHPEQDLTPDGRAS 302 (548)
Q Consensus 243 ---~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (548)
.+...++.............. ..++..+. ..... ....+.... .
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~---------------~ 282 (475)
T TIGR00924 219 LLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDA-VARNKMYAYIVLFLEA---------------V 282 (475)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCH-HHHhHHHHHHHHHHHH---------------H
Confidence 000001100000000000000 00000000 00000 000000000 0
Q ss_pred CCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHH
Q 008934 303 NPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIG 382 (548)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG 382 (548)
..| +...|..+...++..+.+|..++ ++.+|+++++++|++.++++.|+.+. ++.++.+|..+++...++.+|
T Consensus 283 ~~~--~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~----~~~~l~~~~~~~~~~~k~~~G 355 (475)
T TIGR00924 283 VFW--VLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAM----IWTRLGRKGKDPTTPLKFTLG 355 (475)
T ss_pred HHH--HHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHH----HHHHHHhCCCCCCcHHHHHHH
Confidence 112 22345555555555666777765 78899999999999999999998654 344444432226777789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHH
Q 008934 383 LLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLS 462 (548)
Q Consensus 383 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~ 462 (548)
+++.++++..+++.... . + +..++|.||+++.+++.++||.+..|..++++++.+|+++||+++|++
T Consensus 356 ~~l~~~~~~~~~~~~~~----~------~---~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~ 422 (475)
T TIGR00924 356 MLFCGASFLTFAASIWF----A------D---AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMW 422 (475)
T ss_pred HHHHHHHHHHHHHHHhh----c------C---CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999988765210 0 0 012469999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008934 463 GAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYG 528 (548)
Q Consensus 463 ~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 528 (548)
.+...+|+.+++.+........ ++..+|...+++.++..++.+...++.+
T Consensus 423 ~l~~~~g~~l~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 423 FLAQAMGSLLGGYLATFGAVPQ----------------GVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhccc----------------chhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999877643211 1344566667666666666666555443
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=5.9e-35 Score=310.34 Aligned_cols=437 Identities=15% Similarity=0.175 Sum_probs=306.8
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
-+|+|.++.++..+++|++++|++..+++.|+++++|+++.+++.+.+.+....+++++++|+++||++||||++.++.+
T Consensus 5 ~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~i 84 (493)
T PRK15462 5 ASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGAL 84 (493)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999999999995599999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++.+++.... .+...+.++..+..+|.|...++.+++++|++|+++ ++|.
T Consensus 85 l~~lg~lll~~~~----------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~-----~~R~ 137 (493)
T PRK15462 85 LMAIGHVVLGASE----------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTD-----PRRD 137 (493)
T ss_pred HHHHHHHHHHHhh----------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCC-----cccc
Confidence 9999887665422 012334555667778889999999999999999865 3489
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCC-CCCCch--hHHH-----H-
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKA-NTSLLP--GLTQ-----V- 243 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-----~- 243 (548)
++++++|...|+|+.++|.+.+++.+.+||++.|.++++.++++++.++..++.+.+... ..++.+ +... +
T Consensus 138 sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (493)
T PRK15462 138 GGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLL 217 (493)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999887777777766665544433210 111111 1000 0
Q ss_pred HHH----HHhhccCCCCCcchhh--------------hhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCC
Q 008934 244 LVA----SFKNRRTKLPTQATEE--------------MYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPN 305 (548)
Q Consensus 244 ~~~----~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 305 (548)
+.. .+......... .... .+.... ...+.-+......... ...++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~er~r~~~~~~l~~----------~~~~Fw 281 (493)
T PRK15462 218 VLLVATPALITVLFWKEW-SVYALIVATIIGLGVLAKIYRKAE-----NQKQRKELGLIVTLTF----------FSMLFW 281 (493)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC-----CHHHHhhHHHHHHHHH----------HHHHHH
Confidence 000 00000000000 0000 000000 0000000000000000 011344
Q ss_pred ccchHHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHH
Q 008934 306 SLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLF 385 (548)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l 385 (548)
.. .+|..+...++..+.+|++++ ++.+|++++|++|++.++++.|+. ..++.|+.+++++++...|+.+|+++
T Consensus 282 ~~--~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~----a~lw~~l~~~~~~~s~~~Kfa~g~~~ 354 (493)
T PRK15462 282 AF--AQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFL----AWVVKESVAGNRTVRIWGKFALGLGL 354 (493)
T ss_pred HH--HHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHH----HHHHHHHhcCCCCCCcHHHHHHHHHH
Confidence 32 577777778888899999987 899999999999999999999984 44566664333348899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHH
Q 008934 386 STASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAG 465 (548)
Q Consensus 386 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~ 465 (548)
.+++++++...... . ++ ...+|.+|++..++++++||.+.+|..++++.+.+|++.+|++||++.+.
T Consensus 355 ~g~~f~~l~~~~~~---~-------~~---~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~ 421 (493)
T PRK15462 355 MSAGFCILTLSARW---S-------AM---YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLL 421 (493)
T ss_pred HHHHHHHHHHHHhh---c-------CC---CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 99999988765411 0 00 01368999999999999999999999999999999999999999999875
Q ss_pred H-HHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 008934 466 L-SAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMAN 516 (548)
Q Consensus 466 ~-~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~ 516 (548)
. .+|+.++..+.+..... +..+-...+-+..+|..+|...+.++++.
T Consensus 422 ~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 422 SGAIANYLAGVIADQTSQA----SFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHhccc----cCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 4 68888887776654311 00000000001124666777777666555
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.3e-33 Score=304.97 Aligned_cols=455 Identities=13% Similarity=0.183 Sum_probs=309.1
Q ss_pred cccccCCCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccch
Q 008934 5 PLLINKNPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRY 84 (548)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk 84 (548)
|..+.+.. +++|.++.++..+++|++++|++..+++.|+++++|+++++++++.+.+.......++++|+++||++|||
T Consensus 10 ~~~~~~~~-~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r 88 (500)
T PRK09584 10 ESVSLNAF-KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK 88 (500)
T ss_pred CCCChhhh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 44443333 56788999999999999999999999999999999999999999999888888888889999999933999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCC
Q 008934 85 RMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDG 164 (548)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 164 (548)
+++.++.++..++..++.++. .+.+.+.++++++++|.|...++..++++|++|+++
T Consensus 89 ~~~~~g~~~~~ig~~l~~~~~----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~- 145 (500)
T PRK09584 89 RVIMLGAIVLAIGYALVAWSG----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD- 145 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc-
Confidence 999999999999988887653 034557788999999999999999999999998765
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceecc--CCCCCCchhH--
Q 008934 165 TKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKS--KANTSLLPGL-- 240 (548)
Q Consensus 165 ~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~-- 240 (548)
++|+++++++|+..|+|+.+||.+++++.+++||++.|.+.++..+++++.+....+.++++ +++.++.+..
T Consensus 146 ----~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (500)
T PRK09584 146 ----PRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKL 221 (500)
T ss_pred ----hhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhH
Confidence 33667899999999999999999999999999999999998876666665554443332222 2222222211
Q ss_pred H----HHHHHHHhhcc-CCCCCcchhhh-----------hhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCC
Q 008934 241 T----QVLVASFKNRR-TKLPTQATEEM-----------YHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNP 304 (548)
Q Consensus 241 ~----~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 304 (548)
. ........... ...++ ..... +..... .....+..+.+....+... ...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------~i~f 288 (500)
T PRK09584 222 LLTIVGVVALIAIATWLLHNQE-IARMALGVVALGIVVIFGKEAF--AMKGAARRKMIVAFILMLE----------AIIF 288 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHH----------HHHH
Confidence 0 00000000000 00000 00000 000000 0000000000000000000 0011
Q ss_pred CccchHHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHH
Q 008934 305 NSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLL 384 (548)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~ 384 (548)
|.. ..|.......+..+..+..+. ++.+|+++++++|++.+++..|+.+. +++|+.+| ++..+++.+|++
T Consensus 289 ~~~--~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~----~~~~l~~r---~~~~~~~~~G~~ 358 (500)
T PRK09584 289 FVL--YSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAA----IYNKMGDR---LPMPHKFAIGMV 358 (500)
T ss_pred HHH--HHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHH----HHHHhCcC---CCcHHHHHHHHH
Confidence 111 222222222222334455554 67899999999999999999998554 46677666 778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHH
Q 008934 385 FSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGA 464 (548)
Q Consensus 385 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 464 (548)
+.+++++.+...... . ++...++.+|+++.+++.++||++.+|..++++.+.+|+++||.++|++.+
T Consensus 359 l~~l~f~~l~~~~~~-------~------~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l 425 (500)
T PRK09584 359 LCSGAFLVLPLGAKF-------A------NDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFL 425 (500)
T ss_pred HHHHHHHHHHHHHHh-------c------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999999998775411 0 011346888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008934 465 GLSAANLVASLIMNAVDDITKRGGNGGWIPS-NINKGHYDYYYWLLTALSMANFLYYLACCKAYGPF 530 (548)
Q Consensus 465 ~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 530 (548)
...+|+.++..+.+.... . .-..+ ....+.+..+|...++++++..++.+...++.++.
T Consensus 426 ~~a~g~~~~g~~~~~~~~--~-----~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 426 TTAGAALIAGYVANLMAV--P-----DNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHhcc--c-----cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888764321 0 00000 01112367788888877776666666666655544
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.97 E-value=5.8e-27 Score=257.29 Aligned_cols=335 Identities=21% Similarity=0.382 Sum_probs=246.3
Q ss_pred HHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCC
Q 008934 31 MATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGA 110 (548)
Q Consensus 31 ~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~ 110 (548)
++|||+...+.+|+++.+|++++++..+...+....++.++++|+++|+++||+|++.++.++..+|..++++++ .|..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999888765 2220
Q ss_pred CCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 008934 111 KPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAV 190 (548)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp 190 (548)
....+....+++.++.++|.|+.+|+..++.+|+++++++ ++|.+.++++|+++|+|+.+++
T Consensus 80 --------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~----~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 80 --------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL----SLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred --------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 0011345577889999999999999999999999987554 4589999999999999999999
Q ss_pred HHHHHhhhc-------cCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcchhhh
Q 008934 191 TCIVYIQDN-------LGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQATEEM 263 (548)
Q Consensus 191 ~i~~~l~~~-------~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (548)
++.+++.+. .+|..+|.+++++++++++++....++++++++..+++.+..++++.+.+++.....+.....+
T Consensus 142 ~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~~~~~~ 221 (654)
T TIGR00926 142 IITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEHWPLHW 221 (654)
T ss_pred HHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcccchhH
Confidence 999999744 3699999999999999999888888888777777776777777777777654332211000111
Q ss_pred hhcCCCCccc-CCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcccch
Q 008934 264 YHHGKGSMRL-MPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNI 342 (548)
Q Consensus 264 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~ 342 (548)
.+........ ......+.+....+. . ....+|.. ..|..+.. .+++..++.+++ ++.+|+++++.
T Consensus 222 ld~a~~~~~~~~V~evkrll~il~l~-i---------~~~ifw~~--~~Q~~s~~-~~qa~~m~~~l~-g~~ip~~~lq~ 287 (654)
T TIGR00926 222 LDYAKDKHDIRMIRSTKRLLRVLVLF-I---------PLPMFWAL--FDQQGSRW-TLQATRMDGDVG-GFEIQPDQMQV 287 (654)
T ss_pred HHHhccccccchHHHHHHHHHHHHHH-H---------HHHHHHHH--HhcchhHH-HHHHHHhcCccC-CEecCHHHHHH
Confidence 1110000000 000000000000000 0 00122211 12222222 223555666665 68899999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 343 FAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARR 401 (548)
Q Consensus 343 ~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~ 401 (548)
+|++.++++.|+++..++|..+|...+ +++..++.+|++++++++.++...+..++
T Consensus 288 ~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 288 VNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred HHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998888988776444 78999999999999999999988877655
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=3.8e-23 Score=217.41 Aligned_cols=377 Identities=12% Similarity=0.038 Sum_probs=250.3
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.|.+..+....++..++.....+.++.|+++++|.|+.+.+++.+.+.++..+++++.|+++||+ ||||++..+.++..
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 46677777788889999888999999999999999999999999999999999999999999996 99999999998888
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++...+.++..... ....+...+++.|+++|+|.+...++..+++.|.+|+++ |++++
T Consensus 93 ~~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~-------r~~~~ 150 (399)
T PRK05122 93 LSGLLYLLAGLLAA---------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH-------TGRVI 150 (399)
T ss_pred HHHHHHHHhhhhhc---------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh-------hccch
Confidence 77666554331100 001145678899999999999999999999999998844 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCC
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKL 255 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (548)
++.....++|.++||.+++++.++.||+..+.+.++..++..+. ....++ +++++++..+..+.+ ++
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~----~~----- 217 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL-ARPRPA---VPPVKGERLPFRRVL----GR----- 217 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH-HhcCCC---CCCCCccchhHHHHH----HH-----
Confidence 99888899999999999999999999999887766544333222 111111 111111111110000 00
Q ss_pred CCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCcee
Q 008934 256 PTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEI 335 (548)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i 335 (548)
.+. ....+.-.. +........... ...+.+..
T Consensus 218 -------~~~-----------~~~~~~~~~----------------------~~~~~~~~~~~~---~~~~~~~~----- 249 (399)
T PRK05122 218 -------VWP-----------YGMGLALAS----------------------IGFGTIATFITL---YYAARGWD----- 249 (399)
T ss_pred -------HHH-----------HHHHHHHHH----------------------HHHHHHHHHHHH---HHHHcccc-----
Confidence 000 000000000 000000000000 00011110
Q ss_pred cCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccc
Q 008934 336 PSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRA 415 (548)
Q Consensus 336 ~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (548)
..........+..++ ..+..+++.+| .++++.+..+.++.++++..+....
T Consensus 250 ~~~~~~~~~~~~~~~--------~~~~~g~l~~r---~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 300 (399)
T PRK05122 250 GAALALTLFGVAFVG--------ARLLFGNLINR---LGGLRVAIVSLLVEILGLLLLWLAP------------------ 300 (399)
T ss_pred cchHHHHHHHHHHHH--------HHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 001111111111111 22334444444 5555667777777777776665543
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCC
Q 008934 416 VVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPS 495 (548)
Q Consensus 416 ~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~ 495 (548)
+.+.+++..++.|++.+...|.......+..|++.||+++|+++....+|..+++.+.+.+.+..
T Consensus 301 ----~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------- 365 (399)
T PRK05122 301 ----SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF----------- 365 (399)
T ss_pred ----cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 45566677889999999888888777888999999999999999999999999999988866422
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHhhh
Q 008934 496 NINKGHYDYYYWLLTALSMANFLYYLACCK 525 (548)
Q Consensus 496 ~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 525 (548)
++...|+..+++.++++++.+...+
T Consensus 366 -----g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 366 -----GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2567788888887877766655433
No 9
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.3e-23 Score=221.41 Aligned_cols=373 Identities=14% Similarity=0.115 Sum_probs=249.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMV 99 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~ 99 (548)
++++...++.+++++.+.++++.|+++++|+|+.+.|++.+...+...+..+++|+++||+ |||+++..+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999999999999999999999999999999996 999999999999999988
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY 179 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 179 (548)
++..++ +.+.+++.|+++|++.+...|...+++.|.+|++ +|++++++.+
T Consensus 92 ~~~~~~-----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~a~~~~~ 141 (400)
T PRK11646 92 TMAIAH-----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPH-------QRGRFFSLLM 141 (400)
T ss_pred HHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHH
Confidence 887655 6788889999999999988899999999999974 4899999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcc
Q 008934 180 VFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQA 259 (548)
Q Consensus 180 ~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (548)
...++|..+||.+++++. .+||++.|++.++..++..+......++.+.+ +..++. .+.....+++++...
T Consensus 142 ~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~---- 212 (400)
T PRK11646 142 MQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TVRTPV---REGMTRVLRDKRFVT---- 212 (400)
T ss_pred HHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-ccchhh---HHHHHHHHcCchHHH----
Confidence 999999999999999998 67999999988776665544333333321111 111111 011111111111000
Q ss_pred hhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcc
Q 008934 260 TEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGS 339 (548)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~ 339 (548)
......... +...+..... ....... + +.....+.
T Consensus 213 -----------------~~~~~~~~~----------------------~~~~~~~~~~----p~~~~~~-~-~~~~~~g~ 247 (400)
T PRK11646 213 -----------------YVLTLTGYY----------------------MLAVQVMLML----PIMVNDI-A-GSPSAVKW 247 (400)
T ss_pred -----------------HHHHHHHHH----------------------HHHHHHHHhh----hhhHHhh-c-CCchHHHH
Confidence 000000000 0000000000 0000000 0 00000011
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccccc
Q 008934 340 FNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQM 419 (548)
Q Consensus 340 ~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (548)
+...+.+..+.. ..+.. +..+|+ .+..+.+..+.++.+++++.+...+
T Consensus 248 l~~~~~~~~~~~-------~~~~~-~~~~~r--~~~~~~~~~~~~~~~~~~~~l~~~~---------------------- 295 (400)
T PRK11646 248 MYAIEACLSLTL-------LYPIA-RWSEKR--FRLEHRLMAGLLIMSLSMFPIGMVS---------------------- 295 (400)
T ss_pred HHHHHHHHHHHH-------HHHHH-HHHHHh--cchhHHHHHHHHHHHHHHHHHHHhh----------------------
Confidence 222222222211 11222 222221 4444566778878887777665544
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCC
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINK 499 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~ 499 (548)
+.+++.....+.+++++...|...+.+.+.+|++.||+++|+.++..++|..+|+.+.|.+.+.++..
T Consensus 296 ~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~------------ 363 (400)
T PRK11646 296 NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL------------ 363 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc------------
Confidence 45555666678899999999999999999999999999999999999999999999999987654210
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 008934 500 GHYDYYYWLLTALSMANFLYYL 521 (548)
Q Consensus 500 ~~~~~~f~~~~~~~~v~~~~~~ 521 (548)
+.....|+..+.+.++..+...
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 364 NQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred CCcchHHHHHHHHHHHHHHHHH
Confidence 1123445555666666655443
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=2.7e-23 Score=218.10 Aligned_cols=376 Identities=11% Similarity=0.051 Sum_probs=246.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
++|..++.+....++.....|...+.+| .+.+++|+|+.+.+++.+.+.++..+++++.|+++||+ ||||++..+.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 3455566655556665555554444455 46889999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++.+.+..++ +.+.+++.|+++|++.+...+...+++.|.+|+++ |++
T Consensus 84 ~~~~~~~~~~~~-----------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~-------r~~ 133 (390)
T PRK03545 84 FIASHVLSALAW-----------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK-------KAQ 133 (390)
T ss_pred HHHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh-------hhh
Confidence 999988888766 78889999999999999989999999999999844 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccC
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRT 253 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (548)
++++.....++|..++|.+++.+.++.|||+.|++.++..++..+......|+.++++ +++.++ ....++++..
T Consensus 134 ~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~ 207 (390)
T PRK03545 134 ALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH--SGSLKS----LPLLFRRPAL 207 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cchHHH----HHHHHhCcHH
Confidence 9999999999999999999999999899999999988766655444333333221111 111111 1111111110
Q ss_pred CCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCc
Q 008934 254 KLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNF 333 (548)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 333 (548)
.. .+.-.... ...... ....+ ........+
T Consensus 208 ~~------------------------~~~~~~~~---------------------~~~~~~-~~~~~-~~~l~~~~g--- 237 (390)
T PRK03545 208 VS------------------------LYLLTVVV---------------------VTAHFT-AYSYI-EPFVQQVAG--- 237 (390)
T ss_pred HH------------------------HHHHHHHH---------------------HHHHHH-HHHHH-HHHHHHhcC---
Confidence 00 00000000 000000 00000 000111111
Q ss_pred eecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 008934 334 EIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDL 413 (548)
Q Consensus 334 ~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (548)
.+......+.. ...+.+.....+.+++.+| .+. +.+..+..+.+++...+....
T Consensus 238 -~s~~~~~~~~~-----~~~~~~~~g~~~~g~l~dr---~~~-~~~~~~~~~~~~~~~~l~~~~---------------- 291 (390)
T PRK03545 238 -LSENFATLLLL-----LFGGAGIIGSVLFSRLGNR---HPS-GFLLIAIALLLVCLLLLLPAA---------------- 291 (390)
T ss_pred -CCccHHHHHHH-----HHHHHHHHHHHHHHHHhhc---cch-hHHHHHHHHHHHHHHHHHHHh----------------
Confidence 22221111111 1111222233445566555 443 345556555555554433222
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 008934 414 RAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWI 493 (548)
Q Consensus 414 ~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~ 493 (548)
.+.+.++...++.|++.+...+.......+..| +.||.++|+.+...++|..+|+.+.|.+.+..
T Consensus 292 -----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~--------- 356 (390)
T PRK03545 292 -----NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL--------- 356 (390)
T ss_pred -----chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------
Confidence 145666777888899888777777788878777 57899999999999999999999999876422
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHhhh
Q 008934 494 PSNINKGHYDYYYWLLTALSMANFLYYLACCK 525 (548)
Q Consensus 494 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 525 (548)
++...|+..+++.++++++++...+
T Consensus 357 -------g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 357 -------GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred -------ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 2467788888888888877765553
No 11
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=3.3e-23 Score=217.87 Aligned_cols=356 Identities=11% Similarity=0.043 Sum_probs=238.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
+.+|+++.++...++...+++.+.++++.|+++++|+|+.++|++.+.+.+...+.+++.|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 4468888888899999999999999999999999999999999999999999999999999999996 999999999998
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++.+++.+++ +.+.+++.+.+.+.+.+...++..++..|.+|++ +|++
T Consensus 83 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~ 132 (395)
T PRK10054 83 FASGFIAIPLVN-----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST-------SKTK 132 (395)
T ss_pred HHHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh-------HHHH
Confidence 888888777765 5667777788888888888888999999999873 4899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccC
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRT 253 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (548)
++++.+...++|.++||.+++++.+ .+|+.+|++.+++.++..+......++.+++++++++ .. .+ ....++++..
T Consensus 133 ~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~ 208 (395)
T PRK10054 133 IFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG-SV-WS-PSVLLQDKAL 208 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh-hh-hh-hhhhccCcee
Confidence 9999999999999999999999875 6999999988877666654443332222111111000 00 00 0000111100
Q ss_pred CCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCc
Q 008934 254 KLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNF 333 (548)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 333 (548)
. .......+.... ..........+.....+..
T Consensus 209 ~--------------------~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~~----- 240 (395)
T PRK10054 209 L--------------------WFTCSGFLASFV-----------------------SGAFASCISQYVMVVADSD----- 240 (395)
T ss_pred h--------------------HHHHHHHHHHHH-----------------------HHHhhhhHHHHHHHhcccc-----
Confidence 0 000000000000 0000000000000000111
Q ss_pred eecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 008934 334 EIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDL 413 (548)
Q Consensus 334 ~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (548)
.+......+.....+. .....+..+++.+| .+++..+.+|+++.++++.......
T Consensus 241 -~~~~~~g~~~~~~~~~-----~~~~~~~~g~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~---------------- 295 (395)
T PRK10054 241 -FAEKVVAVVLPVNAAM-----VVSLQYSVGRRLNA---ANIRPLMTAGTLCFVIGLVGFIFSG---------------- 295 (395)
T ss_pred -hHHHHHHHHHHhhhhh-----eeeehhHHHHHHcc---CCchhHHHHHHHHHHHHHHHHHHcc----------------
Confidence 1111111111111111 11122334454455 5666677788888877776655432
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008934 414 RAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDI 483 (548)
Q Consensus 414 ~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~ 483 (548)
.+.+.+....++.++|++...|..++.+.+.+|++.+|++.+..+ ...+|..+||.+.|.+.+.
T Consensus 296 -----~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~ 359 (395)
T PRK10054 296 -----NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT 359 (395)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 145555667889999999999999999999999999999998765 5679999999999997753
No 12
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=7.9e-23 Score=214.56 Aligned_cols=374 Identities=13% Similarity=0.039 Sum_probs=246.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.+.++.+.+..++..++.....+.+|.|+++++|+|+.+.|++.+.+.+...+++++.|+++||+ ||||++.++.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHH
Confidence 46667777788888888888899999999999999999999999999999999999999999996 99999999988777
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++.+........+. ....+.+.++++|+++|++.+...+...+++.|.+|+++ |++++
T Consensus 93 ~~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~-------r~~a~ 150 (392)
T PRK12382 93 LAGLAYLLAAILPV---------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH-------SGKVM 150 (392)
T ss_pred HHHHHHHhhhcccc---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-------cchhh
Confidence 66544333221111 001256788999999999999988988999999998744 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCC
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKL 255 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (548)
++.+...++|..+||.+++++.+++||+..+.+..+..++... .....++.+++++++.+..+..+.+ ..
T Consensus 151 ~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~----- 220 (392)
T PRK12382 151 SWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA-FNGTVRKVPAHAGERPSLWSVVGLI----WK----- 220 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH-HHHhccCCCCCcccCchHHHHHHHH----HH-----
Confidence 9999999999999999999999889999877655443322221 1111111111110001111100000 00
Q ss_pred CCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCcee
Q 008934 256 PTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEI 335 (548)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i 335 (548)
......-.... ......... ....+.. .
T Consensus 221 ---------------------~~~~~~l~~~~----------------------~~~~~~~~~---~~~~~~~------~ 248 (392)
T PRK12382 221 ---------------------PGLGLALQGVG----------------------FAVIGTFVS---LYFASKG------W 248 (392)
T ss_pred ---------------------hHHHHHHHHHH----------------------HhHHHHHHH---HHHHhcC------C
Confidence 00000000000 000000000 0000111 1
Q ss_pred cCc-ccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcc
Q 008934 336 PSG-SFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLR 414 (548)
Q Consensus 336 ~~~-~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (548)
+.. .......+..+ ...+..+++.+| .++++.+..+..+.+++++.+...+
T Consensus 249 ~~~~~~~~~~~~~~~--------~~~~~~g~l~~r---~g~~~~~~~~~~~~~~~~~~~~~~~----------------- 300 (392)
T PRK12382 249 AMAGFTLTAFGGAFV--------LMRVLFGWMPDR---FGGVKVAIVSLLVETVGLLLLWLAP----------------- 300 (392)
T ss_pred chhHHHHHHHHHHHH--------HHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHHHcc-----------------
Confidence 111 11111111111 233344455555 5555667777788777776655433
Q ss_pred cccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCC
Q 008934 415 AVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIP 494 (548)
Q Consensus 415 ~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~ 494 (548)
+.+.+.+..++.+++++...|.......+..|++.||+++|+++....+|+.+|+.+.+.+.+..
T Consensus 301 -----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~---------- 365 (392)
T PRK12382 301 -----TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF---------- 365 (392)
T ss_pred -----cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 45566667788899999888888888889999999999999999999999999999999876432
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 008934 495 SNINKGHYDYYYWLLTALSMANFLYYLAC 523 (548)
Q Consensus 495 ~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 523 (548)
++...|...+++.+++.++.+..
T Consensus 366 ------g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 366 ------GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred ------CchHHHHHHHHHHHHHHHHHHhh
Confidence 24667888888777777665543
No 13
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=7.1e-23 Score=221.73 Aligned_cols=386 Identities=13% Similarity=0.030 Sum_probs=242.7
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
|.....+.+..++..+..-.+..-+|.. .+++|.+..+.+|+.+.+.++..+..+++|+++||+ |||+++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 3444455555555555555555556655 779999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+++++++.++ +.+.++++|+++|+|.+...+.....+.+.++++ ++|++++
T Consensus 83 ~~~~~~~~a~-----------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~------~~r~~~~ 133 (495)
T PRK14995 83 LASLAAAFSP-----------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE------KQRNMAL 133 (495)
T ss_pred HHHHHHHHcC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH------HHHHHHH
Confidence 9999998866 7888999999999999999888888888877542 4599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHH--------HHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQV--------LVAS 247 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 247 (548)
++.....++|..+||.+++++.++.|||+.|++...+.++.+++.....|+.++++. ++.+..... +...
T Consensus 134 g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~--~~~d~~g~~~~~~~~~~l~~~ 211 (495)
T PRK14995 134 GVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRD--QPLNLGHALMLIVAILLLVYS 211 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CCCChHhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887766665555444443222111 111111100 0111
Q ss_pred HhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchH--------------HHH
Q 008934 248 FKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTV--------------EQV 313 (548)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~ 313 (548)
+++...... +....... . .........+....... ..+..++.++.+ ...
T Consensus 212 ~~~~~~~~~--~~~~~~~~-~---~~~~~~l~~f~~~e~~~----------~~p~~~~~lf~~~~~~~~~~~~~~~~~~~ 275 (495)
T PRK14995 212 AKTALKGFL--SLWVTSLT-L---LTGALLLGLFIRTQLAA----------SRPMIDMRLFTHRIILSGVVMAMTAMITL 275 (495)
T ss_pred HHhccccCC--chHHHHHH-H---HHHHHHHHHHHHHHhcC----------CCCCcCHHHhCCcccHHHHHHHHHHHHHH
Confidence 111000000 00000000 0 00000000000000000 000011100000 000
Q ss_pred HHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHH
Q 008934 314 EELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAW 393 (548)
Q Consensus 314 ~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~ 393 (548)
...... -...+....| .+ .......+....+...+..++.+++.+| .++++.+..|.++.++++..+
T Consensus 276 ~~~~~~-~~~~lq~v~g----~s-----~~~ag~~~~~~~~~~~~~~~~~g~l~~r---~g~~~~~~~g~~~~~~~~~~l 342 (495)
T PRK14995 276 VGFELL-MAQELQFVHG----LS-----PLEAGMFMLPVMVASGFSGPIAGILVSR---LGLRLVATGGMALSALSFYGL 342 (495)
T ss_pred HHHHHH-HHHHHHHHcC----CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCchHHHHHHHHHHHHHHHHH
Confidence 000000 0111111111 11 1122222222223333344555555555 556666778888888887766
Q ss_pred HHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHH
Q 008934 394 AIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVA 473 (548)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg 473 (548)
.... ...+.+......++.|+|.+...++.+..+.+.+|++++|.+++++++.+++|+.+|
T Consensus 343 ~~~~-------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G 403 (495)
T PRK14995 343 AMTD-------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLG 403 (495)
T ss_pred HHhc-------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHH
Confidence 5433 122455566778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh
Q 008934 474 SLIMNAVDD 482 (548)
Q Consensus 474 ~~~~~~i~~ 482 (548)
+++.+.+..
T Consensus 404 ~ai~g~i~~ 412 (495)
T PRK14995 404 IAIFGLLLS 412 (495)
T ss_pred HHHHHHHHH
Confidence 999988754
No 14
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=3.7e-22 Score=214.73 Aligned_cols=397 Identities=10% Similarity=0.020 Sum_probs=243.8
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.+.++.+....++..+..+.+.+.+|.|.+ ++|+|+.+.+++.+.+.++..++.+++|+++||+ ||||++..+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 346677777888888888889998888865 7999999999999999999999999999999996 99999999988888
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++.+++..++ +.+.++++|+++|++.+...|...+++.|.+|+ ++|++++
T Consensus 87 ~~~~~~~~~~-----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 136 (471)
T PRK10504 87 LGSLFCALSG-----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPR-------EQYMAAM 136 (471)
T ss_pred HHHHHHHHhC-----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCH-------HHHHHHH
Confidence 8887776654 677888999999999999999999999999987 4489999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHH---HH--HHHhh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQV---LV--ASFKN 250 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~ 250 (548)
++.+...++|..+||.+++++.++.||++.|.+..+...+..+......++.+.++...+........ .. ....+
T Consensus 137 ~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 216 (471)
T PRK10504 137 TFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDG 216 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999987766655555444433322211111110000000 00 00000
Q ss_pred ccCCCCCcchhhhhhcCCCCcccCCc-chh-hhHHhhhhhcCCCCCCCCCCCCCCCCccch----HHHHH-HHHHHHHHh
Q 008934 251 RRTKLPTQATEEMYHHGKGSMRLMPS-ENL-RFLNKACMAKHPEQDLTPDGRASNPNSLCT----VEQVE-ELKALIKAS 323 (548)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~ 323 (548)
.. +..+............ ... .+..+.. ...+.....+....-.|.... ..... .....+...
T Consensus 217 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 286 (471)
T PRK10504 217 SK--------GLGLSPLAIAGLVAVGVVALLLYLLHAR--NNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPV 286 (471)
T ss_pred CC--------cCCcchHHHHHHHHHHHHHHHHHHHHHh--cCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000000000000 000 0000000 000000000000000000000 00000 000000111
Q ss_pred hccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 324 SMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSI 403 (548)
Q Consensus 324 ~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~ 403 (548)
......| .++. ..........+......++..++.+| .++++.+.+|.++.+++...+.+..
T Consensus 287 ~~~~~~g----~~~~-----~~g~~~~~~~~~~~~~~~~~~~l~~r---~g~~~~~~~~~~~~~~~~~~~~~~~------ 348 (471)
T PRK10504 287 FLQIGLG----FSPF-----HAGLMMIPMVLGSMGMKRIVVQVVNR---FGYRRVLVATTLGLALVSLLFMLVA------ 348 (471)
T ss_pred HHHHHcC----CCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH---cCchHHHHHHHHHHHHHHHHHHhcc------
Confidence 1111121 1111 11111111122222233455566666 6666777778887777766655432
Q ss_pred hhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008934 404 AINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDI 483 (548)
Q Consensus 404 ~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~ 483 (548)
.....+.+....++.|++.++..+..+....+.+|++.+|.++|+.++.+.+|..+|+.+.+.+...
T Consensus 349 -------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~ 415 (471)
T PRK10504 349 -------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGL 415 (471)
T ss_pred -------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0113333445667788999999999999999999999999999999999999999999999987654
Q ss_pred hc
Q 008934 484 TK 485 (548)
Q Consensus 484 ~~ 485 (548)
.+
T Consensus 416 ~g 417 (471)
T PRK10504 416 FG 417 (471)
T ss_pred hh
Confidence 43
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=4.5e-23 Score=217.26 Aligned_cols=383 Identities=14% Similarity=-0.005 Sum_probs=243.1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
.+++|......++..+++.+..+......|.+ .+++|+|+.+.+++.+.+.++..++.++.|+++||+ ||||++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 87 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRM-AQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSV 87 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHH
Confidence 34567777777778888888887776666655 678999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
++..++.+++.++. +.+.+++.|++.|++.+...+...+++.|.+|++ +|
T Consensus 88 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~r 137 (406)
T PRK11551 88 ALFGLFSLATAQAW-----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPR-------LR 137 (406)
T ss_pred HHHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHH-------HH
Confidence 88888877777654 6788899999999999999999999999999884 48
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhc
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNR 251 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (548)
++++++.+...++|..++|.+++.+.+..+|+..|++.+++.++..+......++.++.+++++...+.........+++
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEG 217 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhh
Confidence 99999999999999999999998888888999999987765554444333333322111111000000000000000000
Q ss_pred cCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCC
Q 008934 252 RTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTP 331 (548)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 331 (548)
+. .. ....++...... .. ........ ...+. ..+
T Consensus 218 ~~----------------~~-----~~~~~~~~~~~~------------------~~-~~~~~~~~----p~~~~-~~g- 251 (406)
T PRK11551 218 RA----------------TA-----TLLLWISYFFTL------------------IV-LYFLLNWL----PSLLV-GQG- 251 (406)
T ss_pred hh----------------hH-----HHHHHHHHHHHH------------------HH-HHHHHHHH----HHHHH-hCC-
Confidence 00 00 000000000000 00 00000000 00011 011
Q ss_pred CceecCcccc---hhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008934 332 NFEIPSGSFN---IFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEG 408 (548)
Q Consensus 332 ~~~i~~~~~~---~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~ 408 (548)
.+..... ....+..++... ..+++.+| .++++.+..+.+..+++++.+....
T Consensus 252 ---~s~~~~~~~~~~~~~~~~~~~~--------~~g~l~dr---~g~~~~~~~~~~~~~~~~~~~~~~~----------- 306 (406)
T PRK11551 252 ---LSRSQAGLVQIAFNIGGALGSL--------LIGALMDR---LRPRRVVLLIYAGILASLAALAAAP----------- 306 (406)
T ss_pred ---CChhhhhHHHHHHHHHHHHHHH--------HHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHhcC-----------
Confidence 2222222 222222222222 22233333 3444445555555555555443322
Q ss_pred CCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 008934 409 ISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGG 488 (548)
Q Consensus 409 ~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~ 488 (548)
+.+.+....++.+++.....+...++..+..|++.||+++|+.+....+|..+|+.+.|.+.+..
T Consensus 307 -----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~---- 371 (406)
T PRK11551 307 -----------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG---- 371 (406)
T ss_pred -----------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC----
Confidence 44555566677788777778888888999999999999999999999999999999999866321
Q ss_pred CCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 008934 489 NGGWIPSNINKGHYDYYYWLLTALSMANFLYYLAC 523 (548)
Q Consensus 489 ~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 523 (548)
+.+...++......+++++..+..
T Consensus 372 -----------~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 372 -----------RSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHHHH
Confidence 123455666666666665555444
No 16
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=5e-23 Score=218.01 Aligned_cols=389 Identities=13% Similarity=0.052 Sum_probs=242.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+...+...++..++.......+|.+. ++++.++.++|++.+.+.+...+++++.|+++||+ ||||++..+.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGL 94 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHH
Confidence 3344555567777777777777777775 56788999999999999999999999999999996 999999988887777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+...+....... ..+.+.+++.|++.|++.+...++..+++.|.+|++ +|+++.+
T Consensus 95 ~~~~~~~~~~~~------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 149 (417)
T PRK10489 95 GFIGLALNAFLP------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE-------NLMQAGA 149 (417)
T ss_pred HHHHHHHHHHcC------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH-------HHHHHHH
Confidence 766554321000 115677888899999999988889999999999884 3899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceecc-CCCCCCchhHHHHHHHHHhhccCCC
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKS-KANTSLLPGLTQVLVASFKNRRTKL 255 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (548)
+.+...++|..+||.+++++.+..+|++.|++.++..+++.+..... ++.+++ ++++++..+..+......+++...
T Consensus 150 ~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (417)
T PRK10489 150 ITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PALPPPPQPREHPLRSLLAGFRFLLASPVVG- 227 (417)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCCCCCCcccccchHHHHHHHHHHHcChHHH-
Confidence 99999999999999999999988899999988777666555443322 221111 111111111111111111111000
Q ss_pred CCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCcee
Q 008934 256 PTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEI 335 (548)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i 335 (548)
...+...... . .... ...+ ........+ .
T Consensus 228 -----------------------~~~~~~~~~~------------------~--~~~~---~~~~-p~~~~~~~g----~ 256 (417)
T PRK10489 228 -----------------------GIALLGGLLT------------------M--ASAV---RVLY-PALADEVWQ----M 256 (417)
T ss_pred -----------------------HHHHHHHHHH------------------H--HHhH---HHhh-HHHHHhccC----C
Confidence 0000000000 0 0000 0000 011111111 2
Q ss_pred cCcccc---hhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008934 336 PSGSFN---IFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDD 412 (548)
Q Consensus 336 ~~~~~~---~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 412 (548)
++.... ....+..++. ..+.+++.+| .++.+.+..+.++.+++++.+....
T Consensus 257 ~~~~~g~~~~~~~~g~~ig--------~~~~~~l~~~---~~~~~~l~~~~~~~~~~~~~~~~~~--------------- 310 (417)
T PRK10489 257 GAAQIGLLYAAVPLGAALG--------ALTSGWLAHS---ARPGLLMLLSTLGSFLAVGLFGLMP--------------- 310 (417)
T ss_pred ChhHhHHHHHHHHHHHHHH--------HHHHHHhhhc---cCcchHHHHHHHHHHHHHHHHHccc---------------
Confidence 222222 2222222222 2223333333 3344456667777777766654432
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 008934 413 LRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGW 492 (548)
Q Consensus 413 ~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~ 492 (548)
+.+......++.|++.+...+...++..+..|++.||+++|+.+...++|..+|+.+.|.+.+..+
T Consensus 311 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g------- 376 (417)
T PRK10489 311 -------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT------- 376 (417)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-------
Confidence 455566677888898888888888899999999999999999999999999999999998775321
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcccccCCCc
Q 008934 493 IPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGPFKGRV 534 (548)
Q Consensus 493 ~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 534 (548)
+...++..+++.++..++.+...++.++++.++
T Consensus 377 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 377 ---------PVASASASGFGLLIIGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred ---------hhhHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 233455555555444444444445555444444
No 17
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.91 E-value=2.1e-21 Score=204.47 Aligned_cols=383 Identities=13% Similarity=0.098 Sum_probs=248.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhH-----HHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTA-----ATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-----ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
|....+....++..++++...+++|.|++ ++|++..+ ++++.+++.+...++.++.|+++||+ |||+++..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 34556667788888888889999999975 68998765 48889999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
++..++..++..+. +.+.+++.|++.|++.+ ..+...+++.+.+|+++ |
T Consensus 92 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~-------~ 140 (408)
T PRK09874 92 LGMGIVMVLMGLAQ-----------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK-------S 140 (408)
T ss_pred HHHHHHHHHHHHHh-----------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh-------h
Confidence 88888887777654 67788899999998865 45777888899988743 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhc
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNR 251 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (548)
+++.++.+...++|..++|.+++.+.++.+|+..|++.++..++..+......++..+++++ ++..+. +.....++++
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ 218 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSK-KEMLHM-REVVTSLKNP 218 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccc-hhhhHH-HHHHHhCcCC
Confidence 99999999999999999999999999989999999988876665555444333321111111 010010 0000000100
Q ss_pred cCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCC
Q 008934 252 RTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTP 331 (548)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 331 (548)
+. ....+-..... ............. ...+. .+
T Consensus 219 ~~------------------------~~~~~~~~~~~------------------~~~~~~~~~~~~~---~~~~~-~~- 251 (408)
T PRK09874 219 KL------------------------VLSLFVTTLII------------------QVATGSIAPILTL---YVREL-AG- 251 (408)
T ss_pred ch------------------------HHHHHHHHHHH------------------HHHHHHHHHHHHH---HHHHH-hc-
Confidence 00 00000000000 0000000000000 00000 00
Q ss_pred CceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008934 332 NFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISD 411 (548)
Q Consensus 332 ~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 411 (548)
. . .... ...........+...+..+..+++.+| .++++.+..+.++.+++++.....+
T Consensus 252 ~--~--~~~~-~~~g~~~~~~~l~~~~~~~~~g~l~dr---~g~~~~~~~~~~~~~~~~~~~~~~~-------------- 309 (408)
T PRK09874 252 N--V--SNIA-FISGMIASVPGVAALLSAPRLGKLGDR---IGPEKILITALIFSVLLLIPMSFVQ-------------- 309 (408)
T ss_pred c--c--hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhHHHHHHHHHHHHHHHHHhc--------------
Confidence 0 0 0000 000000001112222344455566666 5666667777777666665554433
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 008934 412 DLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGG 491 (548)
Q Consensus 412 ~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~ 491 (548)
+.+.+.+..++.|++++...|...+...+..|++.+|..+++++....+|..+|+.+.+.+.+..
T Consensus 310 --------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~------- 374 (408)
T PRK09874 310 --------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY------- 374 (408)
T ss_pred --------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-------
Confidence 45666677788999999999999999888999999999999999999999999999999876322
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 492 WIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 492 ~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
++...|+..+++.+++.+..+...++.
T Consensus 375 ---------g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 375 ---------GFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 256778888888888777665544333
No 18
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=2.3e-21 Score=203.86 Aligned_cols=186 Identities=12% Similarity=0.094 Sum_probs=156.5
Q ss_pred CccccccCCCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008934 3 TEPLLINKNPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVG 82 (548)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~G 82 (548)
.||-...+..|+.|+....+....++.....|...+.+|.+ .+++|+++++.++..+.+.++..+++++.|+++||+ |
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g 83 (394)
T PRK10213 6 AENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-D 83 (394)
T ss_pred cCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-C
Confidence 34444444556677776666666566666666666777765 679999999999999999999999999999999996 9
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCC
Q 008934 83 RYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKG 162 (548)
Q Consensus 83 rk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~ 162 (548)
|||++..+.++..++.+++..++ +.+.+++.|+++|++.|...+...+++.|.+|++
T Consensus 84 rr~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 140 (394)
T PRK10213 84 RRYVVILFAVLLTLSCLLVSFAN-----------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPR 140 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHC-----------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHh
Confidence 99999999999999888887755 7889999999999999999999999999999884
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHH
Q 008934 163 DGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 163 ~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
+|+++.++.....++|..++|.+++++.+++||++.|++.+++.++..+..
T Consensus 141 -------~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 141 -------TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999999998876555444333
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=3.8e-21 Score=202.80 Aligned_cols=357 Identities=15% Similarity=0.099 Sum_probs=226.3
Q ss_pred cchHHHHHHHHHHHH---HHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 16 LRTLPFIIANEAFER---MATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
.+..+..+...+.+. ++.....+.++. +++++|.|+.+.++..+.+.++..+++++.|+++||+ ||||++.++..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 344444444444443 344445555554 4679999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++..+...++ +.+.+++.|+++|++.+...+...+.+.|.+|+++ |.
T Consensus 87 ~~~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-------~~ 136 (406)
T PRK15402 87 FFILTCLAILLAQ-----------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD-------AI 136 (406)
T ss_pred HHHHHHHHHHHHc-----------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH-------HH
Confidence 8888888877655 67778899999999999888889999999998844 78
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhcc
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRR 252 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (548)
++.++.+....+|..++|.+++++.++.+|++.|++.++..++..+......|+.+++++++.+..+........++++.
T Consensus 137 ~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (406)
T PRK15402 137 KITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRR 216 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcH
Confidence 88888888888999999999999999889999999887776665554443333322111111111111111111111110
Q ss_pred CCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCC
Q 008934 253 TKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPN 332 (548)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 332 (548)
... ..+...... .. ........ ........+
T Consensus 217 ~~~------------------------~~~~~~~~~------------------~~-~~~~~~~~----p~~~~~~~g-- 247 (406)
T PRK15402 217 FVA------------------------GALALGLVS------------------LP-LLAWIALS----PVILISGEQ-- 247 (406)
T ss_pred HHH------------------------HHHHHHHHH------------------HH-HHHHHHHh----HHHHHHHhC--
Confidence 000 000000000 00 00000000 000001111
Q ss_pred ceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008934 333 FEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDD 412 (548)
Q Consensus 333 ~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 412 (548)
.++....... ....+...+..+..+++.+| .+.++.+.+|.++.+++...+.....
T Consensus 248 --~~~~~~g~~~-----~~~~~~~~~g~~~~g~l~~r---~~~~~~~~~~~~~~~~g~~~~~~~~~-------------- 303 (406)
T PRK15402 248 --LSSYEYGLLQ-----VPVFGALIAGNLTLARLTSR---RPLRSLIRMGLWPMVAGLLLAALATV-------------- 303 (406)
T ss_pred --CCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 1111111110 00011111123345555555 66667778888888777776655420
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 413 LRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVD 481 (548)
Q Consensus 413 ~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~ 481 (548)
....+.++++...++.++|++...+..+...... +++.+|+++++.++.+.+|..+|+.+.+.+.
T Consensus 304 ---~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 304 ---ISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0112466677888999999999888777766444 4588999999999999999999999988754
No 20
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.91 E-value=1.4e-21 Score=203.14 Aligned_cols=367 Identities=14% Similarity=0.123 Sum_probs=227.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHH-HHHHHHHHHHHH
Q 008934 23 IANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGF-GCFTCLLGMVLL 101 (548)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~-~~~~~~~~~~l~ 101 (548)
++..++..++.....+.++.|+++++|.|+.+.|++.+.+.+...+.+++.|+++||+ ||||.+++ +..+..++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3457788888999999999999999999999999999999999999999999999996 99987665 444555566666
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH--HHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS--YFSWYY 179 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~ 179 (548)
..++ +.+.+++.|++++.+.+...|...++..|..|+++ |.+ ..+..+
T Consensus 82 ~~~~-----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~ 131 (375)
T TIGR00899 82 AWNR-----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG-------REAVMFSSVMR 131 (375)
T ss_pred Hhcc-----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc-------hhhHHHHHHHH
Confidence 6544 56778888888888877778888888888776533 333 357777
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcc
Q 008934 180 VFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQA 259 (548)
Q Consensus 180 ~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (548)
...++|..+||.+++++.+.+||++.|++.++..++..+..+...|+.++++++++...+.. ...+++
T Consensus 132 ~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-------- 199 (375)
T TIGR00899 132 AQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALTRLEVR----GLLASR-------- 199 (375)
T ss_pred HHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccCcchhh----hhhcCc--------
Confidence 78899999999999999998999999999888666555544433333222111111100000 000000
Q ss_pred hhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcc
Q 008934 260 TEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGS 339 (548)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~ 339 (548)
....+...... .+ .+ ........ ........+ .++..
T Consensus 200 ------------------~~~~~~~~~~~---------------~~-~~-~~~~~~~~----~~~~~~~~g----~~~~~ 236 (375)
T TIGR00899 200 ------------------DTRLLFVACTL---------------MW-GC-NILYIINM----PLLIIHELG----LPDKL 236 (375)
T ss_pred ------------------chHHHHHHHHH---------------HH-HH-HHHHHhhh----HHHHHHHcC----CCHHH
Confidence 00000000000 00 00 00000000 000001111 22222
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccccc
Q 008934 340 FNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQM 419 (548)
Q Consensus 340 ~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (548)
...+....... .....+..+++.+| .++++.+.++.++..+.+..+...+
T Consensus 237 ~g~~~~~~~~~-----~~~~~~~~g~l~~r---~g~~~~~~~~~~~~~~~~~~~~~~~---------------------- 286 (375)
T TIGR00899 237 AGLMMGTAAGL-----EIPFMLLAGYLIKR---FGKRRLMLLAALAGVAFYTGLAADN---------------------- 286 (375)
T ss_pred HHHHHHHHHHH-----HHHHHHhHHHHHHH---hcchhHHHHHHHHHHHHHHHHHHHH----------------------
Confidence 21111111111 11122233344444 4444555566655554444433322
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCC
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINK 499 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~ 499 (548)
+.+.+....++.+++.+...+..+....+..|++ ++.++|+.+...++|..+|+.+.+.+.+..
T Consensus 287 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~--------------- 350 (375)
T TIGR00899 287 SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERW--------------- 350 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 4555666677788888888888888887888765 679999999999999999999999876432
Q ss_pred cchhHHHHHHHHHHHHHHHHHHH
Q 008934 500 GHYDYYYWLLTALSMANFLYYLA 522 (548)
Q Consensus 500 ~~~~~~f~~~~~~~~v~~~~~~~ 522 (548)
++...|+..+++.+++.+.+..
T Consensus 351 -g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 351 -SYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred -cchhHHHHHHHHHHHHHHHHhe
Confidence 2456677877777777666543
No 21
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=6.8e-22 Score=203.88 Aligned_cols=350 Identities=13% Similarity=0.023 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q 008934 22 IIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLL 101 (548)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~ 101 (548)
++...++..++.......+|.|.. +++.++.+.+++.+++.++..++.++.|+++||+ ||||++..+.++..++..+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445677777777777788888865 6899999999999999999999999999999996 99999999998888777776
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVF 181 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 181 (548)
......+ +.+.+.++++|+++|++.+...++..+++.|.+|++ +|++++++.+..
T Consensus 82 ~~~~~~~------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 136 (365)
T TIGR00900 82 PFVALLG------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE-------QLTQANSLSQAV 136 (365)
T ss_pred HHHHHcC------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH-------HHHHHHhHHHHH
Confidence 6543111 126788899999999999999999999999999984 499999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCch-h----HHHHHHHHHhhccCCCC
Q 008934 182 VSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLP-G----LTQVLVASFKNRRTKLP 256 (548)
Q Consensus 182 ~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~ 256 (548)
.++|..+||.+++++.+..||++.|++.++..+++.+.......+..+++ +.++.+ + ..+......+++.
T Consensus 137 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---- 211 (365)
T TIGR00900 137 RSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-EIQALSNAVLRDTREGIKFVLKNPL---- 211 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-cccccchhHHHHHHhHHHHHHcCcH----
Confidence 99999999999999999899999999887766655544433322211111 111111 1 0000000111100
Q ss_pred CcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHH-HHHHHHHHhhccCCCCCCcee
Q 008934 257 TQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVE-ELKALIKASSMDRHVTPNFEI 335 (548)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lg~~~~i 335 (548)
+..+-..... + ........ ..... ......+ .
T Consensus 212 ----------------------~~~~~~~~~~----------------~-~~~~~~~~~~~~~~----~~~~~~~----~ 244 (365)
T TIGR00900 212 ----------------------LRTLLLLALL----------------F-NLVFAPAIVALFPY----VQSKYLG----R 244 (365)
T ss_pred ----------------------HHHHHHHHHH----------------H-HHHHHHHHHHHhHH----HHHHHhC----C
Confidence 0000000000 0 00000000 00111 0010011 2
Q ss_pred cCcccc---hhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008934 336 PSGSFN---IFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDD 412 (548)
Q Consensus 336 ~~~~~~---~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 412 (548)
+..... ....+..++. .+...++.+| .++++.+..+.++.+++...+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 298 (365)
T TIGR00900 245 GSTHYGWVLAAFGLGALLG--------ALLLGLLGRY---FKRMALMTGAIFVIGLAILVVGLTP--------------- 298 (365)
T ss_pred chHHHHHHHHHHHHHHHHH--------HHHHHHHHHH---hchhHHHHHHHHHHHHHHHHHHhhc---------------
Confidence 222222 2222222222 2223344444 4555566667777777776665543
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 413 LRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 413 ~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
+ +.+.+.+..++.+++.+...+...+...+.+|++.||+++|+.+...+++..+|+.+.|.+.+
T Consensus 299 -----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 299 -----P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred -----h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 256677788899999999999999999999999999999999999999999999999988653
No 22
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.5e-20 Score=190.38 Aligned_cols=381 Identities=16% Similarity=0.131 Sum_probs=259.5
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
.+..|..++.+.+..|+....=+.....+|.- .+++|.|..++|+.++.|.++..++.|+-..+.||+ .||++++..+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~i-A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPI-AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHH
Confidence 34556777777778888888888888888765 789999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
.+++++.+++++++ +++.++++|++.|+..|.+++...+..++..|+++ |
T Consensus 86 ~lFi~~n~l~alAp-----------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~-------~ 135 (394)
T COG2814 86 ALFIVSNLLSALAP-----------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK-------R 135 (394)
T ss_pred HHHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-------h
Confidence 99999999999988 89999999999999999999999999999999955 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC-ceeccCCCCCCchhHHHHHHHHHhh
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP-FYVKSKANTSLLPGLTQVLVASFKN 250 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (548)
+++.++...+..++.++|.+++.++.|.+|||..|+..+++.++..+..+...| +..++ +.+.+..+..+ .+++
T Consensus 136 ~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~-~~~~~~~~~~~----~l~~ 210 (394)
T COG2814 136 GRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISG-SLPGPLRTLLR----LLRR 210 (394)
T ss_pred hhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-CCCcchhHHHH----HhcC
Confidence 999999999999999999999999999999999999999988888877777666 11111 11122222111 1111
Q ss_pred ccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCC
Q 008934 251 RRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVT 330 (548)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 330 (548)
+.... .+.- .....-. - .. ..++++....+.. |
T Consensus 211 p~v~~------------------------~l~~-t~l~~~g------------~-----F~----~ftYi~P~L~~v~-g 243 (394)
T COG2814 211 PGVLL------------------------GLLA-TFLFMTG------------H-----FA----LYTYIRPFLESVA-G 243 (394)
T ss_pred chHHH------------------------HHHH-HHHHHcc------------h-----hh----hHHhHHHHHHHcc-C
Confidence 11000 0000 0000000 0 00 0111111111111 0
Q ss_pred CCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 008934 331 PNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGIS 410 (548)
Q Consensus 331 ~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 410 (548)
++.+ ..-.+++...+...+-..+.+|+.|| ++++.+.....+.++.++.+.+..
T Consensus 244 ----~s~~-----~vs~~Ll~~Gv~~~~Gn~~gGrl~dr----~~~~~l~~~~~l~a~~~l~l~~~~------------- 297 (394)
T COG2814 244 ----FSVS-----AVSLVLLAFGIAGFIGNLLGGRLADR----GPRRALIAALLLLALALLALTFTG------------- 297 (394)
T ss_pred ----CCHh-----HHHHHHHHHHHHHHHHHHHHhhhccc----cchhHHHHHHHHHHHHHHHHHHhc-------------
Confidence 1111 11111222222223344455666554 455556666677777777766654
Q ss_pred CCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 008934 411 DDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNG 490 (548)
Q Consensus 411 ~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~ 490 (548)
-+.+..+...++.+++........+....+.+ ++.++.+++++....++|..+|..+.|.+.+..
T Consensus 298 --------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~------ 362 (394)
T COG2814 298 --------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGGLVLDAL------ 362 (394)
T ss_pred --------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------
Confidence 14445555555555544443333344444433 466999999999999999999999999876432
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 491 GWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 491 ~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
++....+..+...++++++.+...+++
T Consensus 363 ----------g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 363 ----------GYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 356667787777777777665544433
No 23
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=1e-20 Score=198.90 Aligned_cols=351 Identities=14% Similarity=0.081 Sum_probs=216.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++.+....++..++.......++.. .+++|.++.+.+++.+.+.+...+..+++|+++||+ ||||++.++.+++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 445566667777777655555555544 679999999999999999999999999999999996 999999999999988
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.+++..+. + .++.|+++|++.+...|+..+++.|.+|+ ++|+++++
T Consensus 81 ~~~~~~~~~-----------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~-------~~~~~a~~ 127 (393)
T PRK11195 81 GCLLMLFGI-----------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPG-------EKLVKANG 127 (393)
T ss_pred HHHHHHHHH-----------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHH
Confidence 887766543 2 26779999999999999999999999998 44999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCC-CCCCchhHHHHHHHHHhhccCCC
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKA-NTSLLPGLTQVLVASFKNRRTKL 255 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (548)
+.....++|.++||.++|++.+. .|+..+.+.+...+++.+... ..|+.+.+++ .+.......+......
T Consensus 128 ~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~------- 198 (393)
T PRK11195 128 WMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFNL-FIPRLGARRPGQSWNPIALLRDFFHAC------- 198 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHh-cCCCCcccccccCCCHHHHHHHHHHHH-------
Confidence 99999999999999999999885 477777766655444433322 2222211111 1111000011100000
Q ss_pred CCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCcee
Q 008934 256 PTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEI 335 (548)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i 335 (548)
+..+.+.. .....+.... .| .+ ........ .......++ .
T Consensus 199 -----~~l~~~~~--------~~~~~~~~~~-----------------~~-~~-~~~~~~~~----~~~~~~~lg----~ 238 (393)
T PRK11195 199 -----RVLWRDKL--------GRFSLAGTTL-----------------FW-GA-GATLRFLV----LAWAPVALG----I 238 (393)
T ss_pred -----HHHHhCch--------hHHHHHHHHH-----------------HH-HH-HHHHHHHH----HHHHHHHcC----C
Confidence 00011000 0000000000 00 00 00000000 000111111 2
Q ss_pred cCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccc
Q 008934 336 PSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRA 415 (548)
Q Consensus 336 ~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (548)
++.....+. ....+...+..++.+|+.++ .+..+.+..|. +.++....+....
T Consensus 239 s~~~~G~~~-----~~~~~g~i~g~~~~~~l~~~---~~~~~~~~~g~-~~~~~~~~~~~~~------------------ 291 (393)
T PRK11195 239 TLNQPAYLQ-----AVVAIGIAVGAGAAARLVTL---ETVLRVLPAGI-LMGLVVLLMALQH------------------ 291 (393)
T ss_pred ChhHHHHHH-----HHHHHHHHHHHHHHHHHhcC---CcccchHHHHH-HHHHHHHHHHHHh------------------
Confidence 222221111 11111122233334555444 34444555554 3333333333322
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchh-hHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 416 VVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSM-SSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 416 ~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
+.++.....++.|++.++..++.++...+..|+++ +|.++|+.++.++++..++.++.+.+..
T Consensus 292 ----~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 355 (393)
T PRK11195 292 ----SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK 355 (393)
T ss_pred ----HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 45666677788999999999989999888777765 7999999999999999999999887653
No 24
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=2.3e-21 Score=208.89 Aligned_cols=394 Identities=12% Similarity=0.075 Sum_probs=238.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
+..+....++..+........+| ++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 33444455555555555555555 55779999999999999999999999999999999996 99999999999999998
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
+++..++ +.+.++++|+++|++.+...+...+++.|.+|+ ++|+++++++
T Consensus 82 ~~~~~~~-----------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~ 131 (485)
T TIGR00711 82 LLCGVAP-----------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPP-------EKRGRAMAIW 131 (485)
T ss_pred HHHhCcC-----------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCH-------HHHHHHHHHH
Confidence 8887655 678899999999999999999999999999998 4489999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHH--------HHHHhh
Q 008934 179 YVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVL--------VASFKN 250 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 250 (548)
+....+|..+||.+++++.+++||++.|++.++..++..++.....++.++++ .++.+.....+ .....+
T Consensus 132 ~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~ 209 (485)
T TIGR00711 132 GLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSE 209 (485)
T ss_pred HHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999887766655554444433321111 11111111100 000000
Q ss_pred ccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccch---HHHHHHH-HHHHHHhhcc
Q 008934 251 RRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCT---VEQVEEL-KALIKASSMD 326 (548)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~ 326 (548)
....-.. +++...... .........+........++.. ..........+..+. ....... ...+-...+.
T Consensus 210 ~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 283 (485)
T TIGR00711 210 GPERGWF-DSNEILILS----ITGLVAIIAFVVWELTDDNPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQ 283 (485)
T ss_pred CCCCCCC-CchHHHHHH----HHHHHHHHHHHHHHHcCCCCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 000000000 0000000000000000000000 000000000000000 0000000 0000011111
Q ss_pred CCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 327 RHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAIN 406 (548)
Q Consensus 327 ~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~ 406 (548)
...+ .++.... .......+...+..+...++.+| .++++.+.+|..+.+++...+.+..
T Consensus 284 ~~~g----~s~~~~g-----~~~~~~~~~~~~~~~~~g~l~~r---~~~~~~~~~g~~~~~~~~~~~~~~~--------- 342 (485)
T TIGR00711 284 QVLG----YTALQAG-----LHILPVGLAPMLSSPIAGRMGDK---IDPRKLVTIGLILYAVGFYWRAFTF--------- 342 (485)
T ss_pred HhcC----CCHHHHH-----HHHHHHHHHHHHHHHHHHHHHhh---cCcHHHHHHHHHHHHHHHHHHhccC---------
Confidence 1111 2221111 11111222222344445555555 6666777888888888877765321
Q ss_pred cCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 407 EGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 407 ~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
..+.+.+.+....++.|+|.+...++......+..|++.+|+++|+.++.+.+|+.+|+.+.+.+.+
T Consensus 343 ---------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 343 ---------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0223566677778899999999998888888889999999999999999999999999999887653
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=6e-21 Score=200.59 Aligned_cols=365 Identities=10% Similarity=0.034 Sum_probs=231.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q 008934 22 IIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLL 101 (548)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~ 101 (548)
.+++.+..+...+.+.+.+|. +++++|+|.++.+++.+.+.++..+++++.|+++||+ ||||++..+..+++++.+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~ 91 (393)
T PRK09705 14 LVLIGLNMRPLLTSVGPLLPQ-LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMR 91 (393)
T ss_pred HHHHHHHcchhhhccchhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHH
Confidence 334445555555667777775 4789999999999999999999999999999999996 99999999999999999999
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVF 181 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 181 (548)
++++ +.+.++++|+++|+|.+...+...+++.+++| ++ |+++++.+..+
T Consensus 92 ~~a~-----------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~-------~~~~~g~~~~~ 140 (393)
T PRK09705 92 ELYP-----------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR-------TPLVMGLWSAA 140 (393)
T ss_pred HHCc-----------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc-------chhHHHHHHHH
Confidence 9877 67788999999999999999999999999886 33 78999999999
Q ss_pred HHHHHHHHHHHHHHhhhcc-CchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcch
Q 008934 182 VSASSIVAVTCIVYIQDNL-GWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQAT 260 (548)
Q Consensus 182 ~~ig~~~gp~i~~~l~~~~-g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (548)
.+.|..+|+.+++++.++. +|+..+.+.++..++..+..+...++.+++++++ + .+ .++. .. ++
T Consensus 141 ~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~----------~~~~-l~--~~ 205 (393)
T PRK09705 141 LMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKT-T-TT----------PVRV-VF--TP 205 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC-C-cC----------Cccc-cc--CH
Confidence 9999999999999988875 8999887665544443333332222211111100 0 00 0000 00 00
Q ss_pred hhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHH-HHHHHHHhhccCCCCCCceecCcc
Q 008934 261 EEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEE-LKALIKASSMDRHVTPNFEIPSGS 339 (548)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~~i~~~~ 339 (548)
+. +. ..+..... ......... ...+ ..+. + .+...
T Consensus 206 ~~-~~--------------l~~~~~~~-------------------~~~~~~~~~~lp~~----l~~~--g----~s~~~ 241 (393)
T PRK09705 206 RA-WT--------------LGVYFGLI-------------------NGGYASLIAWLPAF----YIEI--G----ASAQY 241 (393)
T ss_pred hH-HH--------------HHHHHHHH-------------------HHHHHHHHHHHHHH----HHHc--C----CChhh
Confidence 00 00 00000000 000000101 1111 1111 1 22221
Q ss_pred ---cchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccc
Q 008934 340 ---FNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAV 416 (548)
Q Consensus 340 ---~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (548)
......+..++ .....+++.+| .++++.+.++..+.+++...+....
T Consensus 242 ag~~~~~~~i~~i~--------g~~~~g~l~~r---~~~~~~~~~~~~l~~~~~~~~~~~~------------------- 291 (393)
T PRK09705 242 SGSLLALMTLGQAA--------GALLMPAMARH---QDRRKLLMLALVLQLVGFCGFIWLP------------------- 291 (393)
T ss_pred hhHHHHHHHHHHHH--------HHHHHHHHHhh---ccchHHHHHHHHHHHHHHHHHHHcc-------------------
Confidence 22222222222 22234444445 5555666777777777766544322
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhhhhhccccc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCC
Q 008934 417 VQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTEL-PKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPS 495 (548)
Q Consensus 417 ~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~ 495 (548)
. +...+ ...+.+++.+...|.......+.. |++.+|..+|+.+....++..+||.+.+.+.+..+
T Consensus 292 ~--~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g---------- 357 (393)
T PRK09705 292 L--QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG---------- 357 (393)
T ss_pred c--hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 0 11111 234567777777777766666666 47889999999999999999999999999775432
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 496 NINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 496 ~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
++...|.+.+++.++..++.+...+++
T Consensus 358 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 358 -----NYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 345667776666666666555544443
No 26
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.90 E-value=2.6e-21 Score=201.34 Aligned_cols=164 Identities=16% Similarity=0.037 Sum_probs=128.4
Q ss_pred HHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccC
Q 008934 29 ERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILP 108 (548)
Q Consensus 29 ~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~ 108 (548)
+...++.+.+.+|.. ++++|+|+.+.|++.+.+.+++.+++++.|+++||+ |||+++..+......+.. .....
T Consensus 3 ~~~~~~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~--- 76 (368)
T TIGR00903 3 SQAIWVTFSPVLSLV-AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP--- 76 (368)
T ss_pred hhHHHHHHHhhHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh---
Confidence 344555555666655 779999999999999999999999999999999996 999887655554444332 22221
Q ss_pred CCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHH
Q 008934 109 GAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIV 188 (548)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 188 (548)
.+...+++.|+++|+|.+. .++..+.++|++|+ ++|++++++.+.+.++|..+
T Consensus 77 -------------------~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~-------~~r~~a~~~~~~~~~lG~~l 129 (368)
T TIGR00903 77 -------------------FNYEWLLACQLLAALGQPF-LLNAFAPAASQIRE-------ERRDLVISLLSFAMYLGIIF 129 (368)
T ss_pred -------------------ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHH
Confidence 1678899999999999986 45556666999997 44999999999999999999
Q ss_pred HHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 189 AVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 189 gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
++.+++++.+++|||..|++.+++.++..++.....|
T Consensus 130 ~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 130 ALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999877766555544444433
No 27
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=4.7e-21 Score=204.06 Aligned_cols=169 Identities=10% Similarity=0.132 Sum_probs=142.6
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+.++..+...++..+..+.....+|.+ .+++|+|+.+++++.+.+.++..++++++|+++||+ |||+++.++.++..+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHH
Confidence 333444445555555555556666666 557999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.++.+.+. +.+.+++.|++.|++.|...+...+++.+++|++ +|+++++
T Consensus 101 ~~~~~~~~~-----------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~-------~rg~~~~ 150 (434)
T PRK11663 101 INILFGFSS-----------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRT-------ERGGWWA 150 (434)
T ss_pred HHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHH-------HHHHHHH
Confidence 988888765 6778888899999999998999999999999984 4899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSA 217 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~ 217 (548)
+.+...++|..++|.+.+++.+++||++.|++.++..++..
T Consensus 151 ~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 151 IWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876555443
No 28
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=8.5e-22 Score=202.32 Aligned_cols=170 Identities=21% Similarity=0.296 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 008934 23 IANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLW 102 (548)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~ 102 (548)
++..++..++.....+.++.++.+++|.|+.+.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 3466777777777888888788999999999999999999999999999999999996 999999999999999855555
Q ss_pred HhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 008934 103 STTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFV 182 (548)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 182 (548)
+++ +.+.++++|++.|++.+...+...+++.|.+|+++ |++++++.+...
T Consensus 81 ~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~ 130 (352)
T PF07690_consen 81 FAS-----------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE-------RGRAFGILSAGF 130 (352)
T ss_dssp HHC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC-------HHHHHHHHHHHH
T ss_pred hhh-----------------------hHHHHhhhccccccccccccccccccccccchhhh-------hhhccccccchh
Confidence 544 56689999999999999999999999999999954 999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 183 SASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 183 ~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
++|.+++|.+++++.+..+|++.|++.++..++..++....
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~ 171 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILF 171 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhh
Confidence 99999999999999988999999999988877776643333
No 29
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=2.2e-20 Score=191.02 Aligned_cols=346 Identities=19% Similarity=0.206 Sum_probs=251.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 008934 21 FIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVL 100 (548)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l 100 (548)
.+....++..+..+...+.++.|. +++|.++.+.+++.+...++..++.++.|+++||+ ||||.+.++.++..++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 445577788888888888898886 56799999999999999999999999999999996 9999999999999999888
Q ss_pred HHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHH
Q 008934 101 LWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYV 180 (548)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 180 (548)
....+ +.+.+.+.|++.|++.+...+...+++.|.+|+++ |++++++.+.
T Consensus 81 ~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 130 (352)
T cd06174 81 LAFAS-----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE-------RGRALGLFSA 130 (352)
T ss_pred HHHhc-----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc-------hhhhhhHHHH
Confidence 87755 67889999999999999999999999999999844 8999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcch
Q 008934 181 FVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQAT 260 (548)
Q Consensus 181 ~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (548)
..++|..++|.+++.+.+..+|+..|++.++..++..+...... +..........-.
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~---------- 187 (352)
T cd06174 131 GFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------RLLLLLALAFFLL---------- 187 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHH----------
Confidence 99999999999999999988999999988877666655443322 1111100000000
Q ss_pred hhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCccc
Q 008934 261 EEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSF 340 (548)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~ 340 (548)
... ..........+..+.. +.. ....+..
T Consensus 188 --------------------~~~--------------------------~~~~~~~~~~~~~~~~--~~~---~~~~~~~ 216 (352)
T cd06174 188 --------------------SFG--------------------------YYGLLTYLPLYLQEVL--GLS---AAEAGLL 216 (352)
T ss_pred --------------------HhH--------------------------HHHHHHHHHHHHHHhc--CCC---HHHHHHH
Confidence 000 0000000000000000 000 0001122
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccccc
Q 008934 341 NIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKL-RMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQM 419 (548)
Q Consensus 341 ~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (548)
.....+..++..++ ..++.+|. ++++ .+..+.++..++.+.+...+
T Consensus 217 ~~~~~~~~~i~~~~----~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~---------------------- 263 (352)
T cd06174 217 LSLFGLGGILGALL----GGLLSDRL-------GRRRLLLLIGLLLAALGLLLLALAP---------------------- 263 (352)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHH-------HhhhHHHHHHHHHHHHHHHHHHHhc----------------------
Confidence 33333333443333 23333443 3334 67788888888888777654
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCC
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINK 499 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~ 499 (548)
+.+.+....++.+++++...+.......+..|++.||+.+|+.+...++|..+++.+.+.+.+.
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~---------------- 327 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT---------------- 327 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------
Confidence 4677888899999999999999999999999999999999999999999999999999886531
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 008934 500 GHYDYYYWLLTALSMANFLYYL 521 (548)
Q Consensus 500 ~~~~~~f~~~~~~~~v~~~~~~ 521 (548)
.++...|...+++.+++.++++
T Consensus 328 ~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred cCcchHHHHHHHHHHHHHHHhe
Confidence 1245667777777777766543
No 30
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=4e-20 Score=192.74 Aligned_cols=178 Identities=15% Similarity=0.137 Sum_probs=150.8
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.|..+.+.+..++..++.....+.+|. +++++|.|+.+.+++.+.+.++..++.++.|+++||+ ||||++..+.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 455555555666666776666666665 4789999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++.++...++ +.+.+.+.|++.|++.+...+...+++.|.+|+ ++|++++
T Consensus 82 ~~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 131 (385)
T TIGR00710 82 LSSLGLALSN-----------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPG-------EELSRIY 131 (385)
T ss_pred HHHHHHHHHc-----------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCc-------HHHHHHH
Confidence 9888887765 677889999999999999999999999999997 4499999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
++.+...++|..++|.+++++.++.+|+..|++.++..++..+......|
T Consensus 132 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 132 SILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999899999999887766655554444333
No 31
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=9.6e-21 Score=200.75 Aligned_cols=386 Identities=9% Similarity=-0.008 Sum_probs=226.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.|.++.+....++..++++.+.++++.|+++++|+|+.+.|++.+++.+...+++++.|+++||+ ||||++.++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 46778877888888998999999999999999999999999999999999999999999999996 99999988766655
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++..........+. .......+..+.++..+...+...+...++.++.. ++++..+
T Consensus 88 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~ 143 (420)
T PRK09528 88 VLFGPFFIYVFAPL-------------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS-----RRSGFEY 143 (420)
T ss_pred HHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH-----hhccccc
Confidence 44332221110000 00011122222233333333333333333332211 2256677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCC-C----CCchhHHHHHHHHHhh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKAN-T----SLLPGLTQVLVASFKN 250 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~ 250 (548)
+......++|..++|.+++++.+ .+|+.+|++.++..++..+..+...++.++++.. + ++.....+.....+++
T Consensus 144 g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (420)
T PRK09528 144 GRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKL 222 (420)
T ss_pred hhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccC
Confidence 88888889999999999999876 4899999988776666555544433322211100 0 0000000000111111
Q ss_pred ccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHH-HHHHHHHhhccCCC
Q 008934 251 RRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEE-LKALIKASSMDRHV 329 (548)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 329 (548)
+.+.. . ...... .. .+ ...... ....+.....+..
T Consensus 223 ~~~~~-------------------l-~l~~~~-~~---------------------~~-~~~~~~~~~~~~~~~~~~~~- 258 (420)
T PRK09528 223 PKFWF-------------------L-VLYVIG-VA---------------------CF-YDVFDQQFPNFFASFFATPE- 258 (420)
T ss_pred CCeEe-------------------e-hHHHHH-HH---------------------HH-HHHHHHHHHHHHHHHHhccC-
Confidence 10000 0 000000 00 00 000000 0011001100111
Q ss_pred CCCceecCc---ccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 330 TPNFEIPSG---SFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAIN 406 (548)
Q Consensus 330 g~~~~i~~~---~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~ 406 (548)
.+.. .+..++.+...+ ..+..+++.+| .++++.+..+.++.++++..+.+.+
T Consensus 259 -----~~~~~~g~~~~~~~~~~~~--------~~~~~g~l~dr---~g~~~~~~~~~~l~~~~~~l~~~~~--------- 313 (420)
T PRK09528 259 -----QGTRVFGYLNSFQVFLEAL--------IMFFAPFIINR---IGAKNALLLAGTIMAVRIIGSGFAT--------- 313 (420)
T ss_pred -----cchHHHHHHHHHHHHHHHH--------HHHHHHHHHHH---hCcchhhHHHHHHHHHHHHHHHhcc---------
Confidence 1111 222222222222 22334444444 5555667778888888777766544
Q ss_pred cCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhc
Q 008934 407 EGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTL-SGAGLSAANLVASLIMNAVDDITK 485 (548)
Q Consensus 407 ~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~~g~~lg~~~~~~i~~~~~ 485 (548)
+.++++...++.+++.....+...+++.+..|++.+++..+. +++...+|+.+|+.+.|.+.+..
T Consensus 314 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~- 379 (420)
T PRK09528 314 -------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI- 379 (420)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 566777778888998888888888888888999999988766 67788999999999999876432
Q ss_pred CCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhh
Q 008934 486 RGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCK 525 (548)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 525 (548)
++...|...+++.++..++.+...+
T Consensus 380 ---------------G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 380 ---------------GFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred ---------------CchHHHHHHHHHHHHHHHHHHHHhc
Confidence 1456677777777766665554443
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.89 E-value=7.7e-21 Score=196.74 Aligned_cols=353 Identities=14% Similarity=0.081 Sum_probs=222.3
Q ss_pred HHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 008934 33 TVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKP 112 (548)
Q Consensus 33 ~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 112 (548)
.|.+ ..+.+++.+++|+|+.+.+++.+++.++..+++++.|+++||+ |||+++.++.++..++.++..+++
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------- 89 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------- 89 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-------
Confidence 4444 4455677889999999999999999999999999999999996 999999999999999998888876
Q ss_pred CCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 113 PACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTC 192 (548)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i 192 (548)
+.+.++++|++.|++.+...+.....+.+.+|+ + |+++.++.....++|..+++.+
T Consensus 90 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~g~~~~~~~ 145 (377)
T TIGR00890 90 ----------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-K-------RGLASGIIIGGYGLGSFILSPL 145 (377)
T ss_pred ----------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-c-------cHHHHHHHHHhcchhHhHHHHH
Confidence 788899999999999998888888888888864 2 7899999999999999887777
Q ss_pred HHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccC-CCCCCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCc
Q 008934 193 IVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSK-ANTSLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSM 271 (548)
Q Consensus 193 ~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (548)
.+.+.+..|||+.|++.++..++..+..+...++.++++ +++++..+..+.....++++..
T Consensus 146 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 207 (377)
T TIGR00890 146 ITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQF------------------ 207 (377)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcCccH------------------
Confidence 777778889999999988766655544433322111111 0101100000000000110000
Q ss_pred ccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCc---ccchhhHHHH
Q 008934 272 RLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSG---SFNIFAILTL 348 (548)
Q Consensus 272 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~---~~~~~~~~~i 348 (548)
.......... ..+ ......... ....+ ++ .+.. .+.....+..
T Consensus 208 ------~~~~~~~~~~---------------~~~----~~~~~~~~~---~~~~~--~~----~~~~~~~~~~~~~~~~~ 253 (377)
T TIGR00890 208 ------WVLYLSFFLN---------------AVS----GLLLIGLYK---PYGQS--LG----LSDGFLVLAVSISSIFN 253 (377)
T ss_pred ------HHHHHHHHHH---------------hHH----HHHHHHHHH---HHHHH--cC----CCHHHHHHHHHHHHHHH
Confidence 0000000000 000 000000000 00001 11 1111 1122222222
Q ss_pred HHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHH
Q 008934 349 TIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYL 428 (548)
Q Consensus 349 i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~ 428 (548)
++ ..+...++.|| .++++.+.++.++.+++.+.+.... +...+.+....
T Consensus 254 ~~--------~~~~~g~l~dr---~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~ 302 (377)
T TIGR00890 254 GG--------GRPFLGALSDK---IGRQKTMSIVFGISAVGMAAMLFIP--------------------MLNDVLFLATV 302 (377)
T ss_pred HH--------HHHHHHHHHHH---HhhhhhhhHHHHHHHHHHHHHHHcc--------------------cchhHHHHHHH
Confidence 22 23333444444 4444556777777777776655432 11222333444
Q ss_pred HHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHH
Q 008934 429 VLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWL 508 (548)
Q Consensus 429 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 508 (548)
++.+++.+...+.......+..|++.||+++|+.+....+|..+++.+.+.+.+.. ++...|.+
T Consensus 303 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------------g~~~~f~~ 366 (377)
T TIGR00890 303 ALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI----------------GFEYTFIV 366 (377)
T ss_pred HHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh----------------chhhHHHH
Confidence 56666666666666777888899999999999999999999999999999866322 24566777
Q ss_pred HHHHHHHHH
Q 008934 509 LTALSMANF 517 (548)
Q Consensus 509 ~~~~~~v~~ 517 (548)
.+++.++++
T Consensus 367 ~~~~~~~~~ 375 (377)
T TIGR00890 367 TGAFALTSL 375 (377)
T ss_pred HHHHHHHhc
Confidence 776666654
No 33
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.89 E-value=6.7e-21 Score=205.18 Aligned_cols=184 Identities=10% Similarity=0.012 Sum_probs=136.6
Q ss_pred CcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhh--------cCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHH
Q 008934 15 GLRTLPFIIANEAFERMATVGFTPNMILYLCREY--------NMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRM 86 (548)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--------g~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~ 86 (548)
+.+.++...+..+........+.+..+. +++.+ |+++.+.+++.+++.++..++++++|+++||+ ||||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVES-LNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHH-HHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 3444455444444444444333443333 45555 89999999999999999999999999999996 99999
Q ss_pred HHHHHHHHHHHHHHHHHhccc-CCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCC
Q 008934 87 IGFGCFTCLLGMVLLWSTTIL-PGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGT 165 (548)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 165 (548)
+.++.+++.++..+.+..... +.. ...+......++++|+++|++.|...+...++++|++|+++
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~-- 153 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSI------------GPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI-- 153 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccc------------cccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh--
Confidence 999999988887777653200 000 00011235678899999999999999999999999999844
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------hccCchhhhHHHHHHHHHHHHH
Q 008934 166 KSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ--------DNLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 166 ~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~--------~~~g~~~~f~i~~~~~~i~~~~ 219 (548)
|++++++......+|..+++.+++.+. +.+|||++|++.++..++..+.
T Consensus 154 -----rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 154 -----RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML 210 (479)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH
Confidence 899999999999999999887765543 3568999999887766655443
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=2.8e-20 Score=194.72 Aligned_cols=178 Identities=12% Similarity=0.169 Sum_probs=153.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++......+....+.+...+.+|.+ ++++|+|.++.+++.+.+.++..+++++.|+++||+ |||+++.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 556667777888888888888888765 779999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.+++..++ +.+.+++.|++.|++.+...+...+++.|.+|++ +|+++++
T Consensus 81 ~~~l~~~~~-----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 130 (382)
T PRK10091 81 GNAMFTLSS-----------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG-------KVTAAVA 130 (382)
T ss_pred HHHHHHHhC-----------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH-------HhhHHHH
Confidence 998888766 7888999999999999998888888999998873 3888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
.......+|..++|.+++++.+..|||+.|++.++..++..+......|+
T Consensus 131 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 131 GMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99889999999999999999998999999999887666555444433343
No 35
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.89 E-value=8.5e-23 Score=213.03 Aligned_cols=347 Identities=28% Similarity=0.380 Sum_probs=207.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCC
Q 008934 84 YRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGD 163 (548)
Q Consensus 84 k~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 163 (548)
.|++++|.+++.+|.+++.+++ .|... .++.+...+++++.++++|.|+.+|++.++++||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~-~~~~~-------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSA-IPPSL-------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHH-TSSSC-------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHH-hcchh-------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 4889999999999999988877 44311 223356889999999999999999999999999999875
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceecc-CCCCCCchh-HH
Q 008934 164 GTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKS-KANTSLLPG-LT 241 (548)
Q Consensus 164 ~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 241 (548)
+ ++|.++++++|+..|+|+.+++.+.+++.+++||.+.|.++++.++++++.++..+++++++ ++.+++..+ ..
T Consensus 67 ~----~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 67 D----SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp T----THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred h----hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 4 66999999999999999999999999999999999999999999999999999988888776 556666665 44
Q ss_pred HHHHHHHhhccCCCCCcchhhhhhc-CCCCc-ccC-Ccchhh--hHHhhhhhcCC----CCC--CCCCCCCC----CCCc
Q 008934 242 QVLVASFKNRRTKLPTQATEEMYHH-GKGSM-RLM-PSENLR--FLNKACMAKHP----EQD--LTPDGRAS----NPNS 306 (548)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-~~~~~~--~l~~~~~~~~~----~~~--~~~~~~~~----~~~~ 306 (548)
.+.....+++....+. ........ ...++ ... ...... ........... +.. ..+..... ..|.
T Consensus 143 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i 221 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPK-GSSWLDWALFQYSERSIFGIIVFIRAAVIFFPEIFFWALFCQVQRVEELKALIRFLPIFLFWI 221 (372)
T ss_dssp HHHHHHHHHHCCCH-H-HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHTTTSSTTTHHHCCHHHCHHHCCCHHH
T ss_pred HHHHHHHHHhhccccc-chHHHHHhhhhhhhhhhhhhhhhccchhhhhhhhhhcccCCccceeeeeeeeeeccccCeEEE
Confidence 4555555555554432 11111111 00000 000 000000 00000000000 000 00000000 0111
Q ss_pred cchHHHHHH---HHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHH
Q 008934 307 LCTVEQVEE---LKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGL 383 (548)
Q Consensus 307 ~~~~~~~~~---~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~ 383 (548)
. ..+... .........+|..+++.+.+|+++++++|++.++++.|+++++++|+.+ ...+ +++..++.+|+
T Consensus 222 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~-~~~~---~~~~~k~~~G~ 295 (372)
T PF00854_consen 222 F--YWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLR-RGIQ---PSPPQKFGIGM 295 (372)
T ss_dssp H--HHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTT-T---------HHHHHHH-
T ss_pred E--eeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhh-hccc---chhhhhhhHHH
Confidence 0 011100 0111114455555664499999999999999999999999999999887 2222 78999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHH
Q 008934 384 LFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSG 463 (548)
Q Consensus 384 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 463 (548)
++..++++.....+.+|......++ .++.+|.++.+++.+++|.+..+...+..++.+|++..+..+|++.
T Consensus 296 ~~~~~~~~~~~~v~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~ 366 (372)
T PF00854_consen 296 VFAILAMFVAAIVEIRRLCYAQPCG---------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWF 366 (372)
T ss_dssp HHHHHHHHTTTHHHH---HH----T---------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcccccC---------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHH
Confidence 9999999999888765553333332 3355778899999999999999999885555555554444444444
Q ss_pred H
Q 008934 464 A 464 (548)
Q Consensus 464 ~ 464 (548)
.
T Consensus 367 ~ 367 (372)
T PF00854_consen 367 A 367 (372)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=4.8e-21 Score=205.20 Aligned_cols=149 Identities=16% Similarity=0.123 Sum_probs=125.4
Q ss_pred HHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCC
Q 008934 42 LYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNG 121 (548)
Q Consensus 42 ~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 121 (548)
..+++++|++.++++++.+.+.+...++.+++|+++||+ |||++++.+.++..++.++++.++
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345789999999999999999999999999999999996 999999999998888888887755
Q ss_pred CcCCCccchHHHHH-HHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 122 CESATWSQLMPLYF-AFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL 200 (548)
Q Consensus 122 ~~~~~~~~~~~~~i-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~ 200 (548)
+.+.+++ .|++.|++.+...+...+++.+.+++ +|+++.++.+.+.++|..++|.+++++.+.+
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~--------~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYR--------RRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHh--------hHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 4555554 46888999987666667788888852 2899999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHHHHh
Q 008934 201 GWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 201 g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
|||++|++.+++.+++.+..++
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988876655544433
No 37
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=7.6e-20 Score=191.35 Aligned_cols=157 Identities=8% Similarity=-0.003 Sum_probs=139.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.|.++.+++..++..++...+.+.+|.|+. ++|+|+.++|++.+.+.++..+++++.|+++||+ ||||++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 366888888999999999999999999966 7899999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++...+..++ +.+.+++.|+++|++.+...+...+.+.+..+++ +|++++
T Consensus 83 ~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 132 (381)
T PRK03633 83 AGCAGLGLMV-----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR-------NRGRLL 132 (381)
T ss_pred HHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-------HHHHHH
Confidence 9888887765 6788999999999999998888888888888773 489999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKV 204 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~ 204 (548)
++++...++|..+||.+++.+.+...++.
T Consensus 133 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 161 (381)
T PRK03633 133 AAYMMVYYLGTVLGQLLVSKVSTELMSVL 161 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccchH
Confidence 99999999999999999999877543333
No 38
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=4.4e-20 Score=193.27 Aligned_cols=366 Identities=12% Similarity=0.032 Sum_probs=235.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHH----HHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMI----GFGCF 92 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~----~~~~~ 92 (548)
|..+.+....++...++-...+++|.|++ ++|+|..+.|++.+++.+...+.+++.|.++||+ ||++.. ..+..
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 81 (382)
T TIGR00902 4 QPFRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASA 81 (382)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHH
Confidence 34455556677777777778899999985 7899999999999999999999999999999996 985433 22222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..+ .+...++ +.+.+++.|.+++.+.+...|...++..+. + ++|+
T Consensus 82 l~~~--~~~~~~~-----------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~-------~~~~ 127 (382)
T TIGR00902 82 IFAA--AFSAGAH-----------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--Q-------KQFG 127 (382)
T ss_pred HHHH--HHHHhhh-----------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--H-------HHcC
Confidence 2221 1222222 678888899999999988888888886543 2 2367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhcc
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRR 252 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (548)
+.++......++|.+++|.+++++.+++||+..|.+.+...++..+. ....++.+++++++++..+..+.....+|+++
T Consensus 128 ~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (382)
T TIGR00902 128 LDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIG-FLIKPTIPPKDAIPEDESQGDSAFIALLKNPM 206 (382)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHcCCCCCCCccccccccccchhHHHHHcChH
Confidence 88899999999999999999999999999999998876543333322 22222211111100000000000111111111
Q ss_pred CCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCC
Q 008934 253 TKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPN 332 (548)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 332 (548)
. ..++-..... ............. ...+ .|
T Consensus 207 ~-------------------------~~~l~~~~l~------------------~~~~~~~~~~~~~---~l~~--~g-- 236 (382)
T TIGR00902 207 N-------------------------LRFLAAVCLI------------------QGAHAAYYGFSAI---YWQA--AG-- 236 (382)
T ss_pred H-------------------------HHHHHHHHHH------------------HHHHHHHHHHHHH---HHHH--CC--
Confidence 0 0000000000 0000111111111 0111 22
Q ss_pred ceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008934 333 FEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDD 412 (548)
Q Consensus 333 ~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 412 (548)
.+......... ...+.+....+..+|+.+| ++.++.+.+|.++.++.+..+++.+
T Consensus 237 --~s~~~~g~l~~-----~~~~~~i~~~~~~~~l~~r---~g~~~~l~~~~~~~~~~~~~~~~~~--------------- 291 (382)
T TIGR00902 237 --ISASATGLLWG-----IGVLAEIIIFAFSNKLFQN---CSARDLLLISAIACVGRWAIIGAIE--------------- 291 (382)
T ss_pred --CCHhHHHHHHH-----HHHHHHHHHHHHhHHHHhh---CCHHHHHHHHHHHHHHHHHHHHhHh---------------
Confidence 33322322222 2223333355566677777 7888889999999999998887765
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 008934 413 LRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSG-AGLSAANLVASLIMNAVDDITKRGGNGG 491 (548)
Q Consensus 413 ~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~~g~~lg~~~~~~i~~~~~~~~~~~ 491 (548)
+.+.++...++.++.+++..+....++.+. |++.+++++++++ ...++|..+|+.+.|.+.+..+
T Consensus 292 -------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g------ 357 (382)
T TIGR00902 292 -------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG------ 357 (382)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 677788888999999999999999999988 9999999999986 5678999999999998764321
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 008934 492 WIPSNINKGHYDYYYWLLTALSMANFLY 519 (548)
Q Consensus 492 ~~~~~~~~~~~~~~f~~~~~~~~v~~~~ 519 (548)
...|+..+++.++++++
T Consensus 358 -----------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 358 -----------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred -----------HHHHHHHHHHHHHHHHH
Confidence 24577777777766554
No 39
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.89 E-value=2.7e-20 Score=196.88 Aligned_cols=176 Identities=12% Similarity=0.068 Sum_probs=147.7
Q ss_pred CcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Q 008934 15 GLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTC 94 (548)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (548)
+|+..+.+.+..+++......+....+ .+++++|+++.+.+++.+++.++..+++++.|+++||+ ||||++..+.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 466666666655555555554444444 78999999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++..+.+++. +.+.+++.|+++|++.+...|...+++.|++|+ ++|+++
T Consensus 84 ~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~-------~~rg~~ 133 (412)
T TIGR02332 84 GIASTATMFAT-----------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPA-------YFRARA 133 (412)
T ss_pred HHHHHHHHHhc-----------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCH-------HHHHHH
Confidence 99999888766 678899999999999999999999999999998 459999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh------ccCchhhhHHHHHHHHHHHHHHHh
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQD------NLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~------~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
+++++...++|.+++|.+++++.+ ..|||+.|++.++..++..++..+
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998864 369999999987766554444433
No 40
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=1.8e-19 Score=189.33 Aligned_cols=179 Identities=15% Similarity=0.146 Sum_probs=128.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHH-HHHHHHHHHhhccccchHHHH-HHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATN-FLPIVGALLADSYVGRYRMIG-FGCFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~-~~~~~~G~laDr~~Grk~~~~-~~~~~~ 94 (548)
+..+..+...++.+++...+.+.++.|+++++|+|+++.|++.+...+... +.++.+|+ +||+ ||||.++ .+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~ 92 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLG 92 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHH
Confidence 556667778999999999999999999999999999999999877666555 55555555 9996 9998755 445555
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++..+..++. +.+.+++.+.+.+...+...|...++..|..++++ +..+..
T Consensus 93 ~~~~~~~~~~~-----------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 144 (393)
T PRK15011 93 VLACTLFAWNR-----------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG-----REAVMF 144 (393)
T ss_pred HHHHHHHHHhh-----------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc-----chHHHH
Confidence 56665555544 45555444444443344567777787777665532 112344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
.++.....++|.++||.+++++.+++|||..|++.++..++..+......|
T Consensus 145 ~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 145 SSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 577888899999999999999999899999999888766655554444333
No 41
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.88 E-value=4e-20 Score=192.13 Aligned_cols=154 Identities=10% Similarity=0.085 Sum_probs=136.6
Q ss_pred HHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCccc
Q 008934 38 PNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQ 117 (548)
Q Consensus 38 ~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 117 (548)
.....++++++|+|+.+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++..++..+.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 3344457889999999999999999999999999999999996 999999999999999888888765
Q ss_pred ccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 118 LRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ 197 (548)
Q Consensus 118 ~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~ 197 (548)
+.+.++++|++.|++.+...+...+++.|.+|+ ++|++++++.....++|..++|.+++++.
T Consensus 81 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 142 (399)
T TIGR00893 81 -----------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPA-------SERATAVSIFNSAQGLGGIIGGPLVGWIL 142 (399)
T ss_pred -----------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCH-------HHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 788899999999999999999999999999998 44999999999999999999999999999
Q ss_pred hccCchhhhHHHHHHHHHHHHHHHh
Q 008934 198 DNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 198 ~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
+..+|++.|++.++..++..+....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 143 IHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred HhCCchHHHHHHHHHHHHHHHHhhh
Confidence 9899999999887766655544433
No 42
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=1.4e-19 Score=191.88 Aligned_cols=168 Identities=14% Similarity=0.135 Sum_probs=145.3
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
+.+++......+..+.+.+..+...+.+ .++++++|+|+.+.+++.+.+.++..+++++.|+++||+ |||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIM-YLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 3445666666667777777766554444 466889999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++..+..+++ +.+.+++.|++.|+|.|...+...+++.|.+|++ +|+
T Consensus 92 ~~~~~~~~~~~~~-----------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~-------~r~ 141 (426)
T PRK12307 92 AYSVGTGLSGLAS-----------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKH-------LKS 141 (426)
T ss_pred HHHHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHh-------Hhh
Confidence 9999988888766 6788999999999999999999999999999984 489
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVI 212 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~ 212 (548)
++.++...+.++|.++++.+.+.+.+.+||++.|++....
T Consensus 142 ~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 142 KASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 9999999999999999999999998889999999875543
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=99.88 E-value=2.6e-20 Score=194.45 Aligned_cols=177 Identities=16% Similarity=0.119 Sum_probs=144.6
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
+.+|+.....+...+......+..... .+++.+++|+++.+.+++.+...++..++.++.|+++||+ |||+++..+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFA-APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHH
Confidence 333455555555555555555544444 4456778999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++..+...+. +.+.+++.+++.|++.+...+...+++.|.+|++ +|+
T Consensus 91 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~r~ 140 (398)
T TIGR00895 91 LFSVFTLLCALAT-----------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKR-------FRG 140 (398)
T ss_pred HHHHHHHHHHHcc-----------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHH-------hhc
Confidence 8888887777654 6777888999999999999999999999999974 489
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
+++++.....++|..++|.+++++.+..||+..|++.++..++..++..
T Consensus 141 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 189 (398)
T TIGR00895 141 TAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLM 189 (398)
T ss_pred hhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999989999999988655444444333
No 44
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.88 E-value=1.1e-19 Score=195.66 Aligned_cols=175 Identities=9% Similarity=0.051 Sum_probs=135.5
Q ss_pred CcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Q 008934 15 GLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTC 94 (548)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (548)
+++.+.......++.....+.+.+.++ ++++++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 345555555556666666666655555 56889999999999999999999999999999999996 9999999999888
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++.++.+.+. +.+.+++.|+++|++.+... ....++++++|++ +|+++
T Consensus 112 ~~~~~~~~~~~-----------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~-------~rg~a 160 (476)
T PLN00028 112 APAVFCMSLVS-----------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGK-------IVGTA 160 (476)
T ss_pred HHHHHHHHHhc-----------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChh-------heeHH
Confidence 88888777765 56778888999999988754 4556789999884 48999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh---------ccCchhhhHHHHHHHHHHHHHHHh
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQD---------NLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~---------~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
+++.+...++|+.+++.+.+.+.. ..|||+.|++.+++.++..+..+.
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999887778888887766655432 248999999988766655444433
No 45
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.88 E-value=2.5e-19 Score=199.57 Aligned_cols=153 Identities=16% Similarity=0.069 Sum_probs=130.4
Q ss_pred HHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcc
Q 008934 37 TPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACD 116 (548)
Q Consensus 37 ~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 116 (548)
...+.+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++.+++.++.++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 34445567889999999999999999999999999999999996 999999999999999888888766
Q ss_pred cccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008934 117 QLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYI 196 (548)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l 196 (548)
+.+.++++|++.|+|.|+..+...++++|.+|+ +.|++.+++......+|.++++.++.++
T Consensus 254 ------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~-------~~Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 254 ------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ-------EKRGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999998 4599999999999999999999877665
Q ss_pred hhc-------------cCchhhhHHHHHHHHHHHHHH
Q 008934 197 QDN-------------LGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 197 ~~~-------------~g~~~~f~i~~~~~~i~~~~~ 220 (548)
... .+||+.|++.++..+++++..
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 543 358888887776555554443
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.88 E-value=1.3e-19 Score=196.18 Aligned_cols=168 Identities=15% Similarity=0.148 Sum_probs=144.2
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
+.+|+.+..+....++..+..+.....++ ++.+++|+|+.+++++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLT-EVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34456556666666666666665555554 56789999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++.++..++. +.+.+++.|++.|++.+...+...+++.|.+|+ ++|+
T Consensus 94 ~~~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~ 143 (496)
T PRK03893 94 LFSVGTLACGFAP-----------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPK-------HLRN 143 (496)
T ss_pred HHHHHHHHHHHHh-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHH
Confidence 9999888888765 678899999999999999999999999999998 4589
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVI 212 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~ 212 (548)
+++++.+...++|..++|.+.+++.++++|++.|++.++.
T Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 144 KASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999875443
No 47
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=4.1e-19 Score=187.91 Aligned_cols=163 Identities=19% Similarity=0.192 Sum_probs=137.3
Q ss_pred HHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 008934 32 ATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAK 111 (548)
Q Consensus 32 ~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~ 111 (548)
+.....+-+|. +.+++|.+..++++..+++.++..++++++|+++||+ |||+++..+.+++.++.+++..++
T Consensus 31 ~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------ 102 (413)
T PRK15403 31 TTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------ 102 (413)
T ss_pred HHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------
Confidence 33333444443 5779999999999999999999999999999999996 999999999999999988888765
Q ss_pred CCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 008934 112 PPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVT 191 (548)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~ 191 (548)
+.+.++++|+++|++.+...+...+.+.|.+|+++ |++.+++.....++|..+||.
T Consensus 103 -----------------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~ 158 (413)
T PRK15403 103 -----------------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK-------GIKLMAIITSIVLVAPIIGPL 158 (413)
T ss_pred -----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999998777777788889998844 889999999999999999999
Q ss_pred HHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 192 CIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 192 i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
+++++.++.||++.|++.++..+++.+..+...|+
T Consensus 159 lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 159 SGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988899999999888766665544443343
No 48
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.88 E-value=6.3e-20 Score=192.32 Aligned_cols=174 Identities=14% Similarity=0.142 Sum_probs=151.2
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
.+++|+.+....+..+.+.+..+......+. +++++|+|+.+.+++.+.+.++..++.++.|+++||+ |||+++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~ 84 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSI 84 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHH
Confidence 3566788788888888888888877777664 5889999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
++..++.+++.++. +.+.+++.|++.|++.+...+...+++.|.+|+++ |
T Consensus 85 ~~~~~~~~~~~~~~-----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-------~ 134 (405)
T TIGR00891 85 VLFSAGTLACGFAP-----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL-------R 134 (405)
T ss_pred HHHHHHHHHHHHhc-----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh-------h
Confidence 99888888887655 67888999999999999999999999999999844 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccC--chhhhHHHHHHHHHHH
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLG--WKVGFGVPAVIMLLSA 217 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g--~~~~f~i~~~~~~i~~ 217 (548)
++++++.....++|..+++.+++.+.+..+ |++.|.+.++..++..
T Consensus 135 ~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 135 NKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888766 9999987665444443
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.88 E-value=3.9e-19 Score=187.38 Aligned_cols=171 Identities=12% Similarity=0.113 Sum_probs=140.7
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
-+-||.+....+..++...+.+....+++.|+ +++|+++.+++++.+.+.++..++.++.|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 34467778888888888888888888899987 57999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++..++.... .. ..+.+.+++.|++.|+|.+...+...+.+.+.+|+ ++|+
T Consensus 87 ~~~~~~~~~~~~~-~~------------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~-------~~~g 140 (402)
T TIGR00897 87 LWCVGHAAFIVFG-LG------------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQ-------DNLS 140 (402)
T ss_pred HHHHHHHHHHHHh-cc------------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCH-------HHHH
Confidence 9888876553211 00 11567778889999999988878888888898888 4499
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhhhccCchhhhHHHHH
Q 008934 173 SYFSWYYVFVSASS-IVAVTCIVYIQDNLGWKVGFGVPAV 211 (548)
Q Consensus 173 ~~~~~~~~~~~ig~-~~gp~i~~~l~~~~g~~~~f~i~~~ 211 (548)
+++++.+...++|. .++|.+++++.+.+||+..++....
T Consensus 141 ~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 141 SAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 99999999999996 6899999999888887666554443
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=1.7e-19 Score=189.43 Aligned_cols=175 Identities=17% Similarity=0.181 Sum_probs=145.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
+.+|..+.......+..+......+.+|.+ .+++|+|+.+.+++.+++.++..++.++.|+++||+ ||||++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 346666666666667777766666666655 689999999999999999999999999999999996 999999999998
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++..+...++ +.+.+++.|++.|++.+...+....+..|.++++ +|++
T Consensus 83 ~~~~~~~~~~~~-----------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~ 132 (394)
T PRK11652 83 FILGTLVALFAH-----------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT-------QLRH 132 (394)
T ss_pred HHHHHHHHHHHc-----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH-------HHHH
Confidence 888888877655 6788899999999999888888888888888763 3888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHH
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
+.++...+..++..++|.+++++.+..||+.+|++.++..++..+..
T Consensus 133 ~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 133 ANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence 89998889999999999999999988899999998776555444333
No 51
>PRK03699 putative transporter; Provisional
Probab=99.87 E-value=6.7e-19 Score=185.08 Aligned_cols=174 Identities=13% Similarity=0.087 Sum_probs=147.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
+|+|.++...+..++.....+..-..+|.. .+++|+|+++.+++.+.+.++..++++++|+++||+ ||||++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPI-AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 456778888788888877777777777764 679999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++..+..+++ +.+.+++.|+++|++.|...+...+++.|.+|+++ |++
T Consensus 82 ~~i~~~l~~~~~-----------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~-------r~~ 131 (394)
T PRK03699 82 MILAVAGLMFSH-----------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ-------RGS 131 (394)
T ss_pred HHHHHHHHHHcc-----------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch-------HHH
Confidence 988888887755 67788999999999999999999999999998733 889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh-ccCchhhhHHHHHHHHHHHHH
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQD-NLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~-~~g~~~~f~i~~~~~~i~~~~ 219 (548)
+++..+...++|+.++|.+.+++.+ ..|||++|.+.++..++..++
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 132 RLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 9988888889999999999888764 579999999877765554443
No 52
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=8.3e-21 Score=201.33 Aligned_cols=367 Identities=13% Similarity=0.101 Sum_probs=236.3
Q ss_pred HhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCC
Q 008934 46 REYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESA 125 (548)
Q Consensus 46 ~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (548)
.++++++.+.+++.+.+.+++.++++++|+++||+ |.|+++..+.++.++++++.+.+.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa-------------------- 124 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAA-------------------- 124 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 36899999999999999999999999999999997 999999999999999999999877
Q ss_pred CccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCchh
Q 008934 126 TWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN-LGWKV 204 (548)
Q Consensus 126 ~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~-~g~~~ 204 (548)
..+.+.+++.|+++|++.|...|+...+.+++.|++ +|++..++.+.+..+|.+++.+++|++.+. .||++
T Consensus 125 -~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~-------Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 125 -SIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPN-------ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred -HhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHH-------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 224457899999999999999999999999999994 499999999999999999999999999998 89999
Q ss_pred hhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHh
Q 008934 205 GFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNK 284 (548)
Q Consensus 205 ~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 284 (548)
+|++.+++.++..++++.... ++|++++..+ +.|..++++...+....
T Consensus 197 ifY~~g~~g~i~~~~w~~~~~----d~P~~h~~is-------------------~~El~~I~~~k~~~~~~--------- 244 (466)
T KOG2532|consen 197 IFYVFGIVGLIWFILWFLFYS----DSPSKHPNIS-------------------EKELKYIEKGKSEAHVK--------- 244 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCcccCCCCC-------------------HHHHHHHHhcccccccC---------
Confidence 999999877766555443322 2222222111 11111221110000000
Q ss_pred hhhhcCCCCCCCCCCCCCCCCc----------cchHHHHHHH----HHHHHHhhccCCCCCCceecCc-ccchhhHHHHH
Q 008934 285 ACMAKHPEQDLTPDGRASNPNS----------LCTVEQVEEL----KALIKASSMDRHVTPNFEIPSG-SFNIFAILTLT 349 (548)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~~~~~~~~lg~~~~i~~~-~~~~~~~~~ii 349 (548)
....+||. +....--++. ...+.+++++..+ ++++... .+.+++-+...
T Consensus 245 --------------~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL--~f~v~~~G~~salP~l~~~ 308 (466)
T KOG2532|consen 245 --------------KKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVL--GFDVRETGFLSALPFLAMA 308 (466)
T ss_pred --------------CCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh--CCChhhhhHHHHHHHHHHH
Confidence 00112221 1110100110 1111144444334 4555554 33344444444
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHH
Q 008934 350 IWIGLYDRAVLPLASKIKGKPCQLSLKLRM--GIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPY 427 (548)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~ 427 (548)
+...+...+.+.+..| .-. .+..+|+ .++....+++++.+++... . ..+..+..
T Consensus 309 ~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~~------------------~--~~~~a~~~ 364 (466)
T KOG2532|consen 309 IVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTSD------------------E--HRLLAVIL 364 (466)
T ss_pred HHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecCC------------------C--cchHHHHH
Confidence 4333333322222222 111 2333444 6777777777777776640 0 11222222
Q ss_pred HHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHH
Q 008934 428 LVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYW 507 (548)
Q Consensus 428 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~ 507 (548)
+.+.-...++..+..+.-..+.+|++ .+..+|+.++...+++.++|.+++.+.. . ++..+| ..+|+
T Consensus 365 l~~~~~~~g~~~~Gf~~~~~~~apq~-a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~--~t~~eW----------~~VF~ 430 (466)
T KOG2532|consen 365 LTIAIGLSGFNISGFYKNHQDIAPQH-AGFVMGIINFVGALAGFIAPLLVGIIVT-D--NTREEW----------RIVFL 430 (466)
T ss_pred HHHHHHHcccchhhhHhhhhhccchH-HHHHHHHHHHHHHHHHHHHHHheeeEeC-C--CCHHHH----------HHHHH
Confidence 22222223344444444444447776 8999999999999999999999988653 1 122334 67899
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 008934 508 LLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 508 ~~~~~~~v~~~~~~~~~~~~ 527 (548)
+.+++.+++.++|.++....
T Consensus 431 i~a~i~~~~~i~f~~f~s~e 450 (466)
T KOG2532|consen 431 IAAGILIVGNIIFLFFGSGE 450 (466)
T ss_pred HHHHHHHHhchheeEeecCc
Confidence 99999999988887776433
No 53
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.87 E-value=6e-19 Score=190.84 Aligned_cols=176 Identities=13% Similarity=0.089 Sum_probs=129.7
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhH-HHH-----HHHHHHHHHHHHHHHHHHHhhccccchHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTA-ATN-----IIFIWTAATNFLPIVGALLADSYVGRYRMIGF 89 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-ag~-----i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~ 89 (548)
+|......+..+++.+.+.. ..+...++.++++.+..+ ..+ +.++..++..+++++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 35555555677777776654 444555778888644422 122 24667788899999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccch
Q 008934 90 GCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKG 169 (548)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
+.+++.+++++++++++...+ +...+..+++.|+++|+|.|+..++..++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~---------------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------ 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATI---------------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------ 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHH---------------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------
Confidence 999999999999886611100 00011248889999999999999999999999999854
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhh--------hccCchhhhHHHHHHHHH
Q 008934 170 ALQSYFSWYYVFVSASSIVAVTCIVYIQ--------DNLGWKVGFGVPAVIMLL 215 (548)
Q Consensus 170 ~r~~~~~~~~~~~~ig~~~gp~i~~~l~--------~~~g~~~~f~i~~~~~~i 215 (548)
|+++.++...+..+|..+|+.+..++. ..+|||++|++.++..++
T Consensus 152 -Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 -RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 888888888777888888876654443 257999999987654443
No 54
>PRK09952 shikimate transporter; Provisional
Probab=99.87 E-value=3.8e-19 Score=189.63 Aligned_cols=179 Identities=15% Similarity=0.156 Sum_probs=132.4
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhh--cCChhHHHHHH-----HHHHHHHHHHHHHHHHHhhccccchH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREY--NMETTAATNII-----FIWTAATNFLPIVGALLADSYVGRYR 85 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g~s~~~ag~i~-----~~~~~~~~~~~~~~G~laDr~~Grk~ 85 (548)
.+++|.........++|...........+.++.+++ +.++.+ +++. ++..++..++.++.|+++||+ |||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~ 95 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHH
Confidence 334566666666777777776665556666767666 787774 5543 234455668888899999996 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCC
Q 008934 86 MIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGT 165 (548)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 165 (548)
++.++.+++.++.++++++++... ......+.+++.|+++|++.|+..+...+++.|.+|+++
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~-- 158 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFST---------------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK-- 158 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHH---------------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC--
Confidence 999999999999999888651110 000012358888999999999999999999999999844
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------hccCchhhhHHHHHHHHH
Q 008934 166 KSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ--------DNLGWKVGFGVPAVIMLL 215 (548)
Q Consensus 166 ~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~--------~~~g~~~~f~i~~~~~~i 215 (548)
|++..+....+..+|..++..+..++. +++|||.+|++.++..++
T Consensus 159 -----rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 159 -----KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 888888888888888888877766654 257999999987765433
No 55
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.2e-20 Score=192.19 Aligned_cols=179 Identities=15% Similarity=0.185 Sum_probs=159.2
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
+..++.+..+.++.++|++.=|.+...++ =.++.+|.+++..|++.+.+.+...+..|+.|+|+||| .||+++.+|.+
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~-~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLK-EVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhH-HHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 44456677778889999998887766443 45888999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+++++.++.+++. .+|.+.+.|.+.|+|.+...|..+++++|.+|+++ |+
T Consensus 107 iW~~Av~~~~fs~-----------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~-------Rs 156 (493)
T KOG1330|consen 107 IWTLAVFASGFSN-----------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK-------RS 156 (493)
T ss_pred HHHHHHHHHHHHH-----------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh-------hh
Confidence 9999999999876 89999999999999999999999999999999955 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHhc
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
++++++|+.+++|.++|..+++++.+..+ ||++|++.+++.++..++..+.
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhh
Confidence 99999999999999999999999988776 9999999988777665554433
No 56
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=5.4e-19 Score=185.85 Aligned_cols=383 Identities=10% Similarity=0.041 Sum_probs=228.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+|......++...++..+.++++.|+++++|+++.+.+++.+.+.+...+++++.|+++||+ ||||++..+.....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567777788888999999999999999999999999999999999999999999999999996 999999887766554
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+...+......+.. .........+++++.+++.+...+...++..|..++ ++..++
T Consensus 81 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------~~~~~g 136 (396)
T TIGR00882 81 LFAPFFIYVFGPLL---------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN---------SNFEYG 136 (396)
T ss_pred HHHHHHHHHhhhHH---------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh---------cccccc
Confidence 43322211100000 000123456667888888888888887777664332 334566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCC------CchhHHHHHHHHHhh
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTS------LLPGLTQVLVASFKN 250 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 250 (548)
......++|.++||.+++.+.+ .+|+.+|++.+++.++..+..+...++.++++..++ +..+ .+.....+++
T Consensus 137 ~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 214 (396)
T TIGR00882 137 KARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFS-LKLALELFRQ 214 (396)
T ss_pred hhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCC-HHHHHHHHcC
Confidence 6677789999999999998865 599999998877666555444333222111100000 0000 0000000111
Q ss_pred ccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCC
Q 008934 251 RRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVT 330 (548)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 330 (548)
+ .+..+-..... . .............+....... .+
T Consensus 215 ~--------------------------~~~~~~l~~~~----------------~-~~~~~~~~~~~~~y~~~~~~~-~~ 250 (396)
T TIGR00882 215 R--------------------------KFWMFVLYVVG----------------V-ACVYDVFDQQFANFFTSFFAT-PQ 250 (396)
T ss_pred C--------------------------cHHHHHHHHHH----------------H-HHHHHHHHHHHHHHHHHhccc-cc
Confidence 0 00000000000 0 000001111111100111110 00
Q ss_pred CCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 008934 331 PNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGIS 410 (548)
Q Consensus 331 ~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 410 (548)
...........+..+.. .......+++.+| .++++.+.++.++.++++......+
T Consensus 251 ----~~~~~~g~~~~~~~i~~-----~~~~~~~g~l~~r---~g~~~~l~~~~~l~~l~~~~~~~~~------------- 305 (396)
T TIGR00882 251 ----QGTRVFGYVTTMGELLN-----ALIMFCAPLIINR---IGAKNALLIAGTIMSVRIIGSSFAT------------- 305 (396)
T ss_pred ----cchHHHHHHHHHHHHHH-----HHHHHHHHHHHHH---hccchhHHHHHHHHHHHHHHHHhcC-------------
Confidence 11111111111111111 1122233344444 5555667788887777776544433
Q ss_pred CCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 008934 411 DDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTL-SGAGLSAANLVASLIMNAVDDITKRGGN 489 (548)
Q Consensus 411 ~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~~g~~lg~~~~~~i~~~~~~~~~ 489 (548)
+.+++.+..++.+++.........+...+..|++.+++..+. ++....+|+.+++.+.|.+.+..
T Consensus 306 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~----- 371 (396)
T TIGR00882 306 ---------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI----- 371 (396)
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-----
Confidence 566677778888888877776677777778888888887776 67889999999999999876532
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 008934 490 GGWIPSNINKGHYDYYYWLLTALSMANFLYY 520 (548)
Q Consensus 490 ~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~ 520 (548)
++...|.+.+++.++..++.
T Consensus 372 -----------G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 372 -----------GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHH
Confidence 25667778777776665543
No 57
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.86 E-value=8.3e-19 Score=182.75 Aligned_cols=160 Identities=16% Similarity=0.169 Sum_probs=139.3
Q ss_pred HHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 008934 32 ATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAK 111 (548)
Q Consensus 32 ~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~ 111 (548)
+.....+.+|.+. +++|+|+.+++++.+++.++..++.+++|+++||+ |||+++..+.++..++..++..+.
T Consensus 6 ~~~~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~------ 77 (377)
T PRK11102 6 AIDMYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ------ 77 (377)
T ss_pred HHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc------
Confidence 4445567888775 57999999999999999999999999999999996 999999999999999888888765
Q ss_pred CCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 008934 112 PPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVT 191 (548)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~ 191 (548)
+.+.+.+.|++.|++.+...+...+++.|.+|++ +|++++++.+...++|..++|.
T Consensus 78 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~ 133 (377)
T PRK11102 78 -----------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKE-------EFSRMMSFVTLVMTIAPLLAPI 133 (377)
T ss_pred -----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999999999884 4899999999999999999999
Q ss_pred HHHHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 192 CIVYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 192 i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+++++.++.+|++.|++.++..++..+.....
T Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 134 IGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998999999998877666555444333
No 58
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.86 E-value=1.6e-19 Score=194.27 Aligned_cols=153 Identities=10% Similarity=0.018 Sum_probs=126.6
Q ss_pred HHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccC
Q 008934 41 ILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRN 120 (548)
Q Consensus 41 ~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 120 (548)
.+.+++++|++..+.|++.+.+.+++.++++++|+++||+ ||||++.++.++..++..+.+....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------- 116 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG-------------- 116 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--------------
Confidence 4467889999999999999999999999999999999996 9999999988887777666654210
Q ss_pred CCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 121 GCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL 200 (548)
Q Consensus 121 ~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~ 200 (548)
....+.+.+++.|+++|++.+...|...++++|++|+++ |+++++++....++|.++++.+..++.+..
T Consensus 117 ----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 117 ----SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK-------RGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred ----cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc-------eeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 001267889999999999999999999999999999854 899999999999999999999887776643
Q ss_pred ---CchhhhHHHHHHHHHHHHH
Q 008934 201 ---GWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 201 ---g~~~~f~i~~~~~~i~~~~ 219 (548)
+|+..|.+.++..++..+.
T Consensus 186 ~~~~~~~~f~~~g~~~~~~~i~ 207 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALIIGFI 207 (467)
T ss_pred ccCcchhHHHHHHHHHHHHHHH
Confidence 5888888877655544333
No 59
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.86 E-value=1.6e-18 Score=181.87 Aligned_cols=169 Identities=14% Similarity=0.060 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 008934 23 IANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLW 102 (548)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~ 102 (548)
+...+....++....+.+|.+ .+++|.|+.+.+++.+.+.++..+++++.|+++||+ |||+++.++.++..++..++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHH
Confidence 334555555655555666655 678999999999999999999999999999999996 999999999999888888877
Q ss_pred HhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 008934 103 STTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFV 182 (548)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 182 (548)
.++ +.+.+++.|+++|++.+...+...+++.|.+|+ ++|+++.++.+...
T Consensus 87 ~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~ 136 (392)
T PRK10473 87 LAE-----------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDD-------RRRAKVLSLLNGIT 136 (392)
T ss_pred HhC-----------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHH
Confidence 654 567788899999999999899999999999998 44999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 183 SASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 183 ~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
++|..++|.+++++.+..||+..|++.++..++..++....
T Consensus 137 ~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 137 CIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred HHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888899999998877666555544333
No 60
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.86 E-value=5.9e-19 Score=184.72 Aligned_cols=338 Identities=9% Similarity=0.026 Sum_probs=208.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccch----HHHHHHHHHHHHHHHH
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRY----RMIGFGCFTCLLGMVL 100 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk----~~~~~~~~~~~~~~~l 100 (548)
..+...+++..+.+++|.|++ ++|.|..++|++.+++.+...++++++|.++||+ ||+ +.+.++..+. ....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHH
Confidence 355556777888899999985 6899999999999999999999999999999996 984 3333222221 1111
Q ss_pred HHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHH
Q 008934 101 LWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYV 180 (548)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 180 (548)
...++ +.+.+++.|++.+++.+...|...++..+..++ |+++++....
T Consensus 88 ~~~~~-----------------------~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~---------~~~a~~~~~~ 135 (382)
T PRK11128 88 WFGAH-----------------------SFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQ---------IGLDYGKVRL 135 (382)
T ss_pred HHhcc-----------------------cHHHHHHHHHHHHHHHcccccHHHHHHHHHHhh---------ccCCcchHHH
Confidence 11112 678888899999999999999888887776322 5667777777
Q ss_pred HHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcch
Q 008934 181 FVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQAT 260 (548)
Q Consensus 181 ~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (548)
..++|.++||.+++++.+++||+..|++.++..++..+... ..++..++++++++..+..+.....++++..
T Consensus 136 ~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------- 207 (382)
T PRK11128 136 WGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPTIMPQGESRQQESAGWPAWKALLKEPTV------- 207 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCCCCCccccccccccccchHHHHHcChhH-------
Confidence 88999999999999999999999999887765444433322 2222111110000000000000111111100
Q ss_pred hhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCccc
Q 008934 261 EEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSF 340 (548)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~ 340 (548)
...+-...... .+ ..........+. .+. | .+....
T Consensus 208 ------------------~~~~~~~~l~~-----------------~~-~~~~~~~~~~~~---~~~--g----~s~~~~ 242 (382)
T PRK11128 208 ------------------WRFLLCVSLLQ-----------------GS-HAAYYGFSAIYW---QAA--G----YSASTI 242 (382)
T ss_pred ------------------HHHHHHHHHHH-----------------HH-hHhHHHHHHHHH---HHC--C----CCHhHH
Confidence 00000000000 00 000000011100 111 1 222222
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccc
Q 008934 341 NIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMS 420 (548)
Q Consensus 341 ~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 420 (548)
..+..... +.+.......+|+.+| .+.++.+..+.++.+++++.+...+ +
T Consensus 243 g~~~~~~~-----~~~~~~~~~~g~l~~r---~~~~~~l~~~~~~~~~~~~~~~~~~----------------------~ 292 (382)
T PRK11128 243 GYLWSLGV-----VAEVLIFAFSNRLFRR---WSARDLLLLSAICGVVRWGLMGSTT----------------------A 292 (382)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHhhh----------------------h
Confidence 22222111 1122233445555555 6777778888888888887766554 6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q 008934 421 AMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSG-AGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 421 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~~g~~lg~~~~~~i~~ 482 (548)
.+.+++..++.|+++++..+....+..+.. ++.+++++++.+ ...++|..+|+.+.|.+.+
T Consensus 293 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 293 LPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788889999999999999999888874 555789999886 5567888999999998764
No 61
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.86 E-value=1.7e-18 Score=184.28 Aligned_cols=169 Identities=18% Similarity=0.188 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhc---CChhHHHHHHHHH---HHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYN---METTAATNIIFIW---TAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~ag~i~~~~---~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
+..+++.+.... ..++..++.++++ .+..+.+.+.+.+ .++..++++++|+++||+ ||||++.++.+++.++
T Consensus 29 ~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 345666666554 5566678888884 5666544444444 444449999999999996 9999999999999999
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
.++.+++++... ........+++.|+++|+|.|+..|...++++|.+|+++ |+++.++
T Consensus 107 ~~~~~~~~~~~~---------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~-------rg~~~~~ 164 (432)
T PRK10406 107 SLVIACLPGYET---------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR-------KGFYASF 164 (432)
T ss_pred HHHHhhcCCchh---------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc-------ccHHHHH
Confidence 998887551110 000123568889999999999999999999999999854 8888898
Q ss_pred HHHHHHHHHHHHHHHHHHhh--------hccCchhhhHHHHHHHHHH
Q 008934 178 YYVFVSASSIVAVTCIVYIQ--------DNLGWKVGFGVPAVIMLLS 216 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~--------~~~g~~~~f~i~~~~~~i~ 216 (548)
.+...+.|..+++.+...+. +.+|||.+|++.++..++.
T Consensus 165 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 165 QYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 88888888888887655543 2579999999877655443
No 62
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=9e-19 Score=187.56 Aligned_cols=155 Identities=12% Similarity=0.030 Sum_probs=123.6
Q ss_pred HHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccc
Q 008934 39 NMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQL 118 (548)
Q Consensus 39 ~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 118 (548)
...+|+.++ |+|+.+.+++.+++.++..++++++|+++||+ |||+++.++.++..++.+++.+...
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~------------ 115 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW------------ 115 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc------------
Confidence 344577877 99999999999999999999999999999996 9999999999988888887776430
Q ss_pred cCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHH-HHHHHHHHhh
Q 008934 119 RNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSI-VAVTCIVYIQ 197 (548)
Q Consensus 119 ~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-~gp~i~~~l~ 197 (548)
...+.+.+++.|++.|++.|...+...+.+.+++|++ +|++++++++.+.++|+. .+|.++..+.
T Consensus 116 -------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 116 -------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK-------ERGGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred -------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChH-------HHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 0125677888899999999998888888899999884 489999999999999874 4555443443
Q ss_pred hccCchhhhHHHHHHHHHHHHHHH
Q 008934 198 DNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 198 ~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
...||++.|++.++..++..++..
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHH
Confidence 445999999988776555444333
No 63
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=3e-18 Score=180.40 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=135.3
Q ss_pred HHHHHHhhHHHHHHH--HhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcc
Q 008934 29 ERMATVGFTPNMILY--LCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTI 106 (548)
Q Consensus 29 ~~~~~~~~~~~l~~y--l~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~ 106 (548)
...++++...++|.+ +++++|.|+.+++++.+++.++..++.+++|+++||+ |||+++..+.++..++..+...+.
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 334444444455544 6789999999999999999999999999999999996 999999999988888887777654
Q ss_pred cCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHH
Q 008934 107 LPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASS 186 (548)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 186 (548)
+.+.+++.|+++|++.+...+...+++.|.+|+++ +++.++......++|.
T Consensus 93 ----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 93 ----------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK-------ANRVFATIMPLVALSP 143 (401)
T ss_pred ----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH-------HHHHHHHHHHHHHHHH
Confidence 67788899999999988888888899999998743 7888888888889999
Q ss_pred HHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHH
Q 008934 187 IVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 187 ~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
.++|.+++++.+++||+..|++.++..++..+..+
T Consensus 144 ~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 144 ALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988776665554443
No 64
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=8e-18 Score=181.53 Aligned_cols=383 Identities=15% Similarity=0.097 Sum_probs=251.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+-.+...+++.+++......-++-++ .++.-|+...+++..+..+-..+..+++|.++||+ .|||+++.+-++..+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 3344444577777777766655566554 46788999999999999999999999999999996 999999999988777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
....+.+.... +..+.+.+++..++.|++.+...|+.++++.+.+|+++ ..++.+
T Consensus 88 ~~~~L~~l~~~------------------~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~-------L~~A~a 142 (524)
T PF05977_consen 88 VALLLAVLAFF------------------GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED-------LPAANA 142 (524)
T ss_pred HHHHHHHHHHh------------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh-------HHHHHH
Confidence 66555543311 12367888888999999999999999999999999855 889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCC
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLP 256 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (548)
+.....|+.-++||.++|.+....|-...|.+.++..++.+..+...+++..+++ .+..+..+.+...++..+
T Consensus 143 l~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~---~~~e~~~~~l~~G~ryv~---- 215 (524)
T PF05977_consen 143 LNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSS---LPRERFFSALREGLRYVR---- 215 (524)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc---cchhhhhhhHHHHHHHHh----
Confidence 9999999999999999999998889999999998877776655444433221111 111122222222221100
Q ss_pred CcchhhhhhcCCCCcccCCcchhh-hHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCcee
Q 008934 257 TQATEEMYHHGKGSMRLMPSENLR-FLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEI 335 (548)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i 335 (548)
.+ ..+. .+-...+.. ++ .........++..+. ++ .
T Consensus 216 --------~~----------~~l~~~l~~~~~~~-----------------l~-~~a~~aLlPl~a~~~----l~----~ 251 (524)
T PF05977_consen 216 --------SS----------PPLRSVLLRSFLFN-----------------LF-ASAVWALLPLFARDV----LG----G 251 (524)
T ss_pred --------cc----------hHHHHHHHHHHHHH-----------------Hh-hhHHHHhhhHHHHHH----hC----C
Confidence 00 0000 000000000 00 000000111111111 11 1
Q ss_pred cCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccc
Q 008934 336 PSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRA 415 (548)
Q Consensus 336 ~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (548)
.+..+..+.+. .-.+.+...+..+ ++.++ .+..+.+..+.++.+++++.+++..
T Consensus 252 ~a~~yGll~a~--~gvGai~Gal~~~---~l~~~---~~~~~lv~~~~~~~a~~~~~lal~~------------------ 305 (524)
T PF05977_consen 252 GASGYGLLLAA--FGVGAILGALLLP---RLRRR---LSSRRLVLLASLLFALALLLLALSP------------------ 305 (524)
T ss_pred cHHHHHHHHHH--HHHHHHHHHHHHH---Hhhcc---cCcchhhHHHHHHHHHHHHHHhcch------------------
Confidence 12222222211 1111122222333 33333 5555667788888888888877665
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCC
Q 008934 416 VVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPS 495 (548)
Q Consensus 416 ~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~ 495 (548)
+.|...+..++.|.+....++..++.+.+.+|+++||.+++++.+....+..+|..+.|.+.+..+
T Consensus 306 ----~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g---------- 371 (524)
T PF05977_consen 306 ----SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG---------- 371 (524)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 677788888999999999999999999999999999999999999999999999999999775432
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 008934 496 NINKGHYDYYYWLLTALSMANFLYYLAC 523 (548)
Q Consensus 496 ~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 523 (548)
....+...+++.+++.++.+..
T Consensus 372 ------~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 372 ------VRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555566556665555444
No 65
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.86 E-value=2.6e-18 Score=182.07 Aligned_cols=394 Identities=12% Similarity=0.066 Sum_probs=228.6
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-hHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGR-YRMIGFGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Gr-k~~~~~~~~~~~ 95 (548)
|+...+....++...++-...++++.|+++++|+|..+.|++.+++.++..++++++|+++||+ || |+++.++.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~ 80 (418)
T TIGR00889 2 KTTAKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGA 80 (418)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHH
Confidence 4455566677778888888889999999999999999999999999999999999999999995 65 778888887777
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCC-ccchhhHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGT-KSKGALQSY 174 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~ 174 (548)
++..+..+.+ +.+.+.+.|++.+++.+...+...++..+...+..+. .+...|.+.
T Consensus 81 ~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~ 137 (418)
T TIGR00889 81 LLLFFAAQVT-----------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRV 137 (418)
T ss_pred HHHHHHHHhc-----------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeee
Confidence 7776666544 5666778888888887777666665543322210000 000114444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC-CCchhHH-HHHHHHHhhcc
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANT-SLLPGLT-QVLVASFKNRR 252 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 252 (548)
++ .+|.++||.+++.+.....| .+|++.++..++..+.. ...++.+++++++ ....+.. .......|+++
T Consensus 138 ~G------~lG~~ig~~l~g~l~~~~~~-~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 209 (418)
T TIGR00889 138 MG------TIGFIAAMWAVSLLDIELSN-IQLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKR 209 (418)
T ss_pred eh------hHHHHHHHHHHHHhcccchh-HHHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHHHhhhhHHHHhcCCC
Confidence 44 47888899888877432223 45666666555544432 2233322111111 0100000 00001111111
Q ss_pred CCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhc-cCCCCC
Q 008934 253 TKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSM-DRHVTP 331 (548)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lg~ 331 (548)
+.. -....++... ..+... .. ....+ +.....
T Consensus 210 ~~~--------------------~~~~~~~~~~------------------------~~~~~~--~~-~~~~~~~~g~~~ 242 (418)
T TIGR00889 210 MAI--------------------FFFFSMLLGA------------------------PLQITN--IF-GNGFLHEFGRNP 242 (418)
T ss_pred eee--------------------HHHHHHHHHh------------------------HHHHHH--Hh-HHHHHHHhcccc
Confidence 000 0000000000 000000 00 00000 000000
Q ss_pred Cc--eecC---cccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 332 NF--EIPS---GSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAIN 406 (548)
Q Consensus 332 ~~--~i~~---~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~ 406 (548)
.. +... +....++.+..++ .....+++.+| +++++.+.++.++.++++..+....
T Consensus 243 ~~~~~~~~~~~g~~~~~~~i~~i~--------~~~~~g~l~dr---~g~r~~l~~~~~~~~v~~~l~~~~~--------- 302 (418)
T TIGR00889 243 EFADSFVVKNASIWMSLSQFSEIF--------FILTIPFFLKR---FGIKKVMLLSLVAWALRFGFFAYGD--------- 302 (418)
T ss_pred cccchhhhhhHHHHHHHHHHHHHH--------HHHHHHHHHHH---hCcHHHHHHHHHHHHHHHHHHHHcC---------
Confidence 00 0000 1122222222222 22334444455 6666778888888888876665422
Q ss_pred cCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhc
Q 008934 407 EGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSG-AGLSAANLVASLIMNAVDDITK 485 (548)
Q Consensus 407 ~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~~g~~lg~~~~~~i~~~~~ 485 (548)
....+.+.+....++.+++++...+....++.+..|++.||+++|+.+ ...++|+.+||.+.|.+.+..+
T Consensus 303 ---------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 303 ---------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred ---------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 001123445667888999999999999999999999999999999997 5688999999999998765432
Q ss_pred CCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008934 486 RGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYG 528 (548)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 528 (548)
... ..+|+..|...+++.++..+.++++.++..
T Consensus 374 ~~~----------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 374 AYG----------TFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred ccc----------CCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 100 013567788888777777777666665443
No 66
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.85 E-value=1.1e-18 Score=187.54 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=128.2
Q ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCC
Q 008934 47 EYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESAT 126 (548)
Q Consensus 47 ~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (548)
++|++..+.|++.+.+.+++.++++++|+++||+ |||+++..+.++..++.++...+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~--------------------- 127 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAA--------------------- 127 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHH---------------------
Confidence 7899999999999999999999999999999996 999999999998888877765432
Q ss_pred ccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-Cchhh
Q 008934 127 WSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL-GWKVG 205 (548)
Q Consensus 127 ~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~-g~~~~ 205 (548)
..+.+.+++.|+++|++.+...+....++.|++|+ ++|++++++.+.+.++|.+++|.+++++.+.+ ||+.+
T Consensus 128 ~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 128 GGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPP-------KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred HcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 01456788899999999999999999999999998 44999999999999999999999999999884 99999
Q ss_pred hHHHHHHHHHHHHHHHh
Q 008934 206 FGVPAVIMLLSALSFFL 222 (548)
Q Consensus 206 f~i~~~~~~i~~~~~~~ 222 (548)
|++.++..++..+..+.
T Consensus 201 f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFV 217 (465)
T ss_pred hhhhhHHHHHHHHHHHH
Confidence 99988766655444433
No 67
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.85 E-value=6.4e-19 Score=188.18 Aligned_cols=150 Identities=17% Similarity=0.218 Sum_probs=126.3
Q ss_pred HHhHhhcCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008934 43 YLCREYNME--------TTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPA 114 (548)
Q Consensus 43 yl~~~lg~s--------~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 114 (548)
.+..+++++ ..+.+++.+++.++..++.+++|+++||+ |||+++.++.+++.++..++....+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~-------- 123 (481)
T TIGR00879 53 LPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF-------- 123 (481)
T ss_pred cHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence 345566666 89999999999999999999999999996 9999999999999998888865431
Q ss_pred cccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHH-
Q 008934 115 CDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCI- 193 (548)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~- 193 (548)
..+.+.++++|+++|+|.+...+...++++|.+|+++ |++++++.+...++|..++|.++
T Consensus 124 ------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-------r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 124 ------------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL-------RGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred ------------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh-------hhhhhhHHHHHHHHHHHHHHHHHH
Confidence 1245678999999999999999999999999999844 89999999999999999999998
Q ss_pred --HHhhhccCchhhhHHHHHHHHHHHHHH
Q 008934 194 --VYIQDNLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 194 --~~l~~~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
+...+..+||+.|++.++..++..+..
T Consensus 185 ~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 185 GKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 666677899999999666555444433
No 68
>PRK15075 citrate-proton symporter; Provisional
Probab=99.84 E-value=8.5e-18 Score=179.06 Aligned_cols=172 Identities=13% Similarity=0.098 Sum_probs=126.1
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHH-HHHHH-----HHHHHHHHHHHHhhccccchHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNII-FIWTA-----ATNFLPIVGALLADSYVGRYRMIGF 89 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~-~~~~~-----~~~~~~~~~G~laDr~~Grk~~~~~ 89 (548)
++......+..+++.+....+....| .+.++++.++.+.+... +.... ...+++++.|+++||+ ||||++..
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYAT-AIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHH
Confidence 45555555566666666555444444 77889999888765443 22222 2246789999999996 99999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccch
Q 008934 90 GCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKG 169 (548)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
+.+++.++.++++++++...+ .......++++|+++|++.|...++...+++|++|+++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~---------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------ 150 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATI---------------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------ 150 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHH---------------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------
Confidence 999999999998876511100 00001246888999999999999999999999999854
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhh--------hccCchhhhHHHHH
Q 008934 170 ALQSYFSWYYVFVSASSIVAVTCIVYIQ--------DNLGWKVGFGVPAV 211 (548)
Q Consensus 170 ~r~~~~~~~~~~~~ig~~~gp~i~~~l~--------~~~g~~~~f~i~~~ 211 (548)
|++++++.....++|..+++.+++.+. +.+|||++|++...
T Consensus 151 -rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 151 -KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 899999988888888888887777653 46799999987544
No 69
>TIGR00898 2A0119 cation transport protein.
Probab=99.84 E-value=4.6e-18 Score=184.56 Aligned_cols=144 Identities=17% Similarity=0.158 Sum_probs=126.6
Q ss_pred HHhHhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCccccc
Q 008934 43 YLCREYNME---TTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLR 119 (548)
Q Consensus 43 yl~~~lg~s---~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 119 (548)
-+.+++|++ +.+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++..++.
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------- 178 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------- 178 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc--------------
Confidence 457799999 99999999999999999999999999996 999999999999988888887765
Q ss_pred CCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 120 NGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN 199 (548)
Q Consensus 120 ~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~ 199 (548)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++......+|.+++|.++..+.+
T Consensus 179 ---------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~-------r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 241 (505)
T TIGR00898 179 ---------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ-------RAIVGTLIQVFFSLGLVLLPLVAYFIPD- 241 (505)
T ss_pred ---------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh-------hHHHHHHHHHHHHHHHHHHHHHHHHhhH-
Confidence 78889999999999999999999999999999844 8999999888889999999988766643
Q ss_pred cCchhhhHHHHHHHHHHHHHH
Q 008934 200 LGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 200 ~g~~~~f~i~~~~~~i~~~~~ 220 (548)
||+.|++.++..++..+..
T Consensus 242 --wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 242 --WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred --HHHHHHHHHHHHHHHHHHH
Confidence 9999998877666555444
No 70
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=1.3e-17 Score=177.82 Aligned_cols=152 Identities=14% Similarity=0.099 Sum_probs=121.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
..+..+..+.+...+........+|.+ ++++|.|+.+.+++.+.+.++..+++++.|+++||+ ||||++.++..++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 26 IPFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYAL 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 333444455566666665556666655 999999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.+++.... . ..+.+.++++|+++|+|.|...++.++++.|..|+++ |...++
T Consensus 104 ~~~l~~~~~-~-------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~-------~~~~~s 156 (438)
T PRK10133 104 GAALFWPAA-E-------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS-------GHFRLN 156 (438)
T ss_pred HHHHHHHHH-h-------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh-------HHHHHH
Confidence 987763211 0 1167889999999999999999999999998755532 555688
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 008934 177 WYYVFVSASSIVAVTCIVYIQ 197 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~ 197 (548)
.......+|..+||.+++.+.
T Consensus 157 ~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 157 LAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999998876543
No 71
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=5.3e-18 Score=201.76 Aligned_cols=357 Identities=10% Similarity=0.033 Sum_probs=221.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChh--HHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETT--AATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~--~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
.+.+...+...++..+...+....+..++...++.+.. ..+++.+++.+...++++++|+++||+ |||+++.++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 46666667777787777777777777788777777654 468889999999999999999999996 999999998877
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++.++..++.. ..+.+.+++.|+++|++.+...++..+++.|.+|+++ |++
T Consensus 87 ~~~~~~~~~~~~~--------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-------r~~ 139 (1146)
T PRK08633 87 EVGLTLLIVLAYY--------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN-------LSR 139 (1146)
T ss_pred HHHHHHHHHHHHH--------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc-------chh
Confidence 6665555443320 0157889999999999999999999999999999854 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc--------c-CchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC--C----Cch
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDN--------L-GWKVGFGVPAVIMLLSALSFFLASPFYVKSKANT--S----LLP 238 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~--------~-g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~--~----~~~ 238 (548)
++++...+.++|.++||.+++++.+. + +|.+.+.+..+...+..+++.+..++.+..++.. . ...
T Consensus 140 ~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (1146)
T PRK08633 140 ANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPK 219 (1146)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHH
Confidence 99999999999999999999998875 2 2333333333322222222222222221111110 0 001
Q ss_pred hHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHH
Q 008934 239 GLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKA 318 (548)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (548)
.....+...++++.+. ...+.... .| +.........
T Consensus 220 ~~~~~~~~l~~~~~~~------------------------~~~~~~~~-----------------~~--~~~~~~~~~~- 255 (1146)
T PRK08633 220 LLWRNLKLLRSDRVLW------------------------LAIIGLSY-----------------FW--FISQLAQANF- 255 (1146)
T ss_pred HHHHHHHHHhcCcHHH------------------------HHHHHHHH-----------------HH--HHHHHHHHhh-
Confidence 1111111111110000 00000000 00 0000000000
Q ss_pred HHHHhhccCCCCCCceecCc-ccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 008934 319 LIKASSMDRHVTPNFEIPSG-SFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVE 397 (548)
Q Consensus 319 ~~~~~~~~~~lg~~~~i~~~-~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~ 397 (548)
.......++ .+.. ....+ .....+...+...+.+++.+| ......+.++.++.+++++.+....
T Consensus 256 ---~~~~~~~~g----~s~~~~~g~~-----~~~~~ig~~~g~~~~g~l~~r---~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 256 ---PAYAKEVLG----LDNTFQVQYL-----LAASAIGIGIGSLLAGRLSGR---HIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred ---HHHHHHHhC----CCcHHHHHHH-----HHHHHHHHHHHHHHHHHHhCC---ceEccchhHHHHHHHHHHHHHHHhh
Confidence 001111111 2222 11111 111111111233345555555 4555566777777777777666543
Q ss_pred HHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 398 AARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIM 477 (548)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~ 477 (548)
+.+.+++..++.|++.++..++.++++.+.+|++.||+++|+.++..++|..+++.+.
T Consensus 321 ----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 321 ----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred ----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 5666777888899999999999999999999999999999999999999998888776
Q ss_pred HHhh
Q 008934 478 NAVD 481 (548)
Q Consensus 478 ~~i~ 481 (548)
+.+.
T Consensus 379 ~~l~ 382 (1146)
T PRK08633 379 TLFS 382 (1146)
T ss_pred HHHH
Confidence 6654
No 72
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.83 E-value=1.7e-17 Score=180.18 Aligned_cols=182 Identities=14% Similarity=0.059 Sum_probs=138.9
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHh-----hcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCRE-----YNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRM 86 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~ 86 (548)
.+.+++.+..+....+.+......+....+.+ ..+ .+.++.+.+++.+.+.++..++.++.|+++||+ |||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~ 88 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKML-GYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRV 88 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHH
Confidence 34445666666666666666665555555543 332 345667788999999999999999999999996 99999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCc
Q 008934 87 IGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTK 166 (548)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 166 (548)
+.++.++..++.++..++.+. .+..+.+.++++|+++|++.|+..+....+++|.+|+++
T Consensus 89 ~~~~~~~~~v~~~~~~~~~~~-----------------~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~--- 148 (502)
T TIGR00887 89 YGMELIIMIIATVASGLSPGS-----------------SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW--- 148 (502)
T ss_pred HHHHHHHHHHHHHHHHHccCc-----------------ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh---
Confidence 999999999988887765410 001125789999999999999999999999999999944
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------------------ccCchhhhHHHHHHHHHHHHH
Q 008934 167 SKGALQSYFSWYYVFVSASSIVAVTCIVYIQD-----------------------NLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 167 ~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~-----------------------~~g~~~~f~i~~~~~~i~~~~ 219 (548)
|++++++.+....+|..+++.+..++.. .++||+.|.+.++..++..+.
T Consensus 149 ----Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 149 ----RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988765532 247999998776655544433
No 73
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.83 E-value=2.7e-18 Score=183.08 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=126.2
Q ss_pred HHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCccccc
Q 008934 40 MILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLR 119 (548)
Q Consensus 40 l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 119 (548)
..+++++ +|+|+++.+++.+++.++..++.++.|+++||+ |||+++.++.++..++..+.....+.
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA------------ 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc------------
Confidence 3446665 599999999999999999999999999999996 99999999988888887776543210
Q ss_pred CCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Q 008934 120 NGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQD- 198 (548)
Q Consensus 120 ~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~- 198 (548)
..+.+.+.+.|++.|++.|...+.....+.|.+|+++ |++++++.+...++|+.++|.+.+.+.+
T Consensus 115 -------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~-------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 115 -------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE-------RGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred -------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc-------chhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 0145667788999999999998989999999999844 8999999999999999999888776444
Q ss_pred ccCchhhhHHHHHHHHHHHHHHHh
Q 008934 199 NLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 199 ~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
+.+||..|++.++..++..+..+.
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 568999999988776655444333
No 74
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.83 E-value=4.3e-18 Score=181.07 Aligned_cols=353 Identities=12% Similarity=0.114 Sum_probs=217.8
Q ss_pred HHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchH-HHHHHHHHHHHHHHHHH
Q 008934 27 AFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY---VGRYR-MIGFGCFTCLLGMVLLW 102 (548)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~---~Grk~-~~~~~~~~~~~~~~l~~ 102 (548)
+..++.+..+.++++.|+++++|+|+.++|++.++..+...+..|+.|+++||. +|||| .++++.....++..++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 445666677778899999999999999999999999999999999999999982 38866 45667777777777666
Q ss_pred HhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHH
Q 008934 103 STTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFV 182 (548)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 182 (548)
..++... ....+.+.+.+++.+++.+.......++..+..++. ++|++..++.....
T Consensus 89 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~------~~R~~~~~~~~~~~ 145 (437)
T TIGR00792 89 TTPDFSA-----------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP------RERESLSTFRRFGA 145 (437)
T ss_pred hCCCCCc-----------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH------HHHHHHHHHHHHHH
Confidence 5331110 113456677778888888888888888888887643 34899999988888
Q ss_pred HHHHHHHHHHHHHhh-------hccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC-CCchhHHHHHHHHHhhccCC
Q 008934 183 SASSIVAVTCIVYIQ-------DNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANT-SLLPGLTQVLVASFKNRRTK 254 (548)
Q Consensus 183 ~ig~~~gp~i~~~l~-------~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 254 (548)
++|..+++.+.+.+. +..+|+..+.+.+++.++..++.+...++.+++++++ ++..+..+.+...++++.+.
T Consensus 146 ~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (437)
T TIGR00792 146 TLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLL 225 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHH
Confidence 888877766655544 2458999998888776666555444443322111111 11111111111112221110
Q ss_pred CCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCce
Q 008934 255 LPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFE 334 (548)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 334 (548)
.. .....+..... ... ... ........++
T Consensus 226 ~~--------------------~~~~~~~~~~~-----------------------~~~---~~~-~~~~~~~~~~---- 254 (437)
T TIGR00792 226 IL--------------------CLAYLFYNLAF-----------------------NIK---NGV-QVYYFTYVLG---- 254 (437)
T ss_pred HH--------------------HHHHHHHHHHH-----------------------HHH---cch-hheeEeeecC----
Confidence 00 00000000000 000 000 0000011110
Q ss_pred ecC--cccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008934 335 IPS--GSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDD 412 (548)
Q Consensus 335 i~~--~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 412 (548)
.+. ..+..+..+. ..+..++..++.+| .+.++.+.+|.++.+++++.+.+..
T Consensus 255 ~~~~~~~~~~~~~i~--------~ii~~~~~~~l~~r---~g~~~~~~~~~~~~~~~~~~~~~~~--------------- 308 (437)
T TIGR00792 255 DPELFSYMGSIAIVA--------GLIGVLLFPRLVKK---FGRKILFAGGILLMVLGYLIFFFAG--------------- 308 (437)
T ss_pred ChHHHHHHHHHHHHH--------HHHHHHHHHHHHHH---hCcHHHHHHHHHHHHHHHHHHHHcc---------------
Confidence 000 0111111222 22234444555555 5666777888888887776655432
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccC-------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008934 413 LRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELP-------KSMSSIASTLSGAGLSAANLVASLIMNAVDDITK 485 (548)
Q Consensus 413 ~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~ 485 (548)
.+.+.+.+..++.+++.+..++..+++..+.+| ++.+|.++|+.++...+|..+|+.+.+.+.+..+
T Consensus 309 ------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 309 ------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 134556667788889999888888888877765 5678999999999999999999999998776543
No 75
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=6e-19 Score=178.22 Aligned_cols=173 Identities=13% Similarity=0.098 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHhh---HHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGF---TPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+-++...++.-.+||-+ .....+++.++.++|.+|.|++.+.+.+.+-++-.+.|.++||. +.|+.+.+++++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 55666777777777765 34566788999999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
..+++++++ +.+.+.+...+.|...|.-.|.....+..++|+++ |++..+
T Consensus 107 ~nil~Gfs~-----------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e-------RG~~~s 156 (448)
T COG2271 107 VNILFGFSP-----------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE-------RGTWWS 156 (448)
T ss_pred HHHHHhhhh-----------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc-------cCceEE
Confidence 999999877 67788888999999999999999999999999954 999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 177 WYYVFVSASSIVAVTCI--VYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~--~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+.+.+-|+|+++.|++. +++..+++|+..|++++++.++..++.+..
T Consensus 157 iWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 157 IWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred EehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 899998899999999998777655555443
No 76
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.82 E-value=4.7e-17 Score=171.86 Aligned_cols=384 Identities=10% Similarity=-0.010 Sum_probs=234.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHh-HhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLC-REYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~-~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
|.++......++.....+...+ +...+. .++|+|++|.+++.+++.+.+.++.++.|++.||+ |.||++.++.++..
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~-l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSA-VTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 4444444443333333443333 444544 48999999999999999999999999999999996 99999999999998
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+.+.+.+++... ...+++.+++.|++.|++ |...+.....+++++|++ +|++++
T Consensus 112 i~~~~~~~a~~~------------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~-------~rG~A~ 165 (462)
T PRK15034 112 IPCVWLGIAVQN------------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA-------KQGSAL 165 (462)
T ss_pred HHHHHHHHHHcc------------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh-------HhHHHH
Confidence 888888865200 012678899999999998 678899999999999984 489999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-----hc-------------cCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCc
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQ-----DN-------------LGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLL 237 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~-----~~-------------~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (548)
++.....|+|..+++.+...+. +. .+|+.++++..+..++..++.++..+..++ ++...
T Consensus 166 Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~~ 242 (462)
T PRK15034 166 GINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRASI 242 (462)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccCH
Confidence 9997777777776666554422 22 235666666666555555444443222111 11122
Q ss_pred hhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHH
Q 008934 238 PGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELK 317 (548)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (548)
.+ ....+|+++. +.- .+.+ .|+...+....
T Consensus 243 ~~----~~~vlk~~~~---------Wll------------slly-------------------------~~tFG~fvg~s 272 (462)
T PRK15034 243 AD----QLPVLQRLHL---------WLL------------SLLY-------------------------LATFGSFIGFS 272 (462)
T ss_pred HH----HHHHhCCCch---------hHH------------HHHH-------------------------HHHHHHHHHHH
Confidence 22 1122222210 000 0000 00000000000
Q ss_pred HHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 008934 318 ALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVE 397 (548)
Q Consensus 318 ~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~ 397 (548)
..+ ....... . ............++...+..|+.+.+.|| .+..+.+.++.+.++++...+....
T Consensus 273 ~~l-p~~~~~~------~-----~~~~~l~~~~l~~l~~~l~rplgG~LADR---iG~~~vl~~~~i~~~i~~~~~~l~l 337 (462)
T PRK15034 273 AGF-AMLAKTQ------F-----PDVNILRLAFFGPFIGAIARSVGGAISDK---FGGVRVTLINFIFMAIFSALLFLTL 337 (462)
T ss_pred HHH-HHHHHHH------c-----ChHHHHHHHHHHHHHHHHHHHhhHHHHHh---cCchHHHHHHHHHHHHHHHHHHHHh
Confidence 000 0000000 0 11122222334556666677888888888 8888888888877777664433322
Q ss_pred HHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc---------------------hhhH
Q 008934 398 AARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK---------------------SMSS 456 (548)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~---------------------~~rg 456 (548)
- . ....+.+.....++...++.++.+-...-++.+..|+ ++.|
T Consensus 338 p-------~---------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 401 (462)
T PRK15034 338 P-------G---------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETA 401 (462)
T ss_pred c-------c---------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHH
Confidence 0 0 0112455555555555556666665566555555553 2678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 457 IASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 457 ~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
.++|+......+|+++-|.+.+...+.+ +++...|+.+.+..++++.+.|....|+
T Consensus 402 ~v~G~v~a~G~~Ggf~~p~~~g~~~~~~---------------g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 402 AALGFISAIGAVGGFFIPQAFGMSLNMT---------------GSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHHHcccchhhHHHHHHHHHc---------------CCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8999999999999999998777654333 2456778888888888888877765554
No 77
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.82 E-value=3.2e-18 Score=177.26 Aligned_cols=152 Identities=15% Similarity=0.194 Sum_probs=132.4
Q ss_pred HHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCccccc
Q 008934 40 MILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLR 119 (548)
Q Consensus 40 l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 119 (548)
...++++++|+|+.+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++...+.
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-------------- 81 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST-------------- 81 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh--------------
Confidence 34467889999999999999999999999999999999996 999999999999999988888765
Q ss_pred CCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHH-HHHHHhhh
Q 008934 120 NGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAV-TCIVYIQD 198 (548)
Q Consensus 120 ~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp-~i~~~l~~ 198 (548)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.+...++|..++| .+++.+.+
T Consensus 82 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 82 ---------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE-------RGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred ---------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh-------heeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 67889999999999999999999999999999844 89999999999999999999 56677777
Q ss_pred ccCchhhhHHHHHHHHHHHHHHHh
Q 008934 199 NLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 199 ~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
..+|+..|++.+++.++..+..+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 146 LYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhe
Confidence 789999998887765554444433
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.82 E-value=1.3e-17 Score=198.32 Aligned_cols=343 Identities=12% Similarity=0.014 Sum_probs=194.3
Q ss_pred HhHhhcCCh-hHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH--HHHHHHHHHHHhcccCCCCCCCcccccC
Q 008934 44 LCREYNMET-TAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF--TCLLGMVLLWSTTILPGAKPPACDQLRN 120 (548)
Q Consensus 44 l~~~lg~s~-~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 120 (548)
+..+.+.+. ...+++.+++.+...+.++++|+++||+ ||||++..... +...+..+.....
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~--------------- 105 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL--------------- 105 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 333444433 4467778889999999999999999996 99998644222 2222222222211
Q ss_pred CCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 121 GCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL 200 (548)
Q Consensus 121 ~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~ 200 (548)
.+.+.++++|+++|++.+...|+..+++.+++|+++ |++++++...+.++|.++||.++|++.+..
T Consensus 106 -------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~-------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~ 171 (1140)
T PRK06814 106 -------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE-------LLGANALVEAGTFIAILLGTIIGGLATISG 171 (1140)
T ss_pred -------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc-------cchhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 167889999999999999999999999999999854 899999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCC----CchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCc
Q 008934 201 GWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTS----LLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPS 276 (548)
Q Consensus 201 g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (548)
+|++.|...++..++++++.+.. ++.+..++..+ ...+....+....+++.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 229 (1140)
T PRK06814 172 NFVILVALLMGIAVLGWLASLFI-PKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWL--------------------- 229 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhC-CCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHH---------------------
Confidence 99998854444444333333322 22211111111 11111111111111110000
Q ss_pred chhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCc---ccchhhHHHHHHHHH
Q 008934 277 ENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSG---SFNIFAILTLTIWIG 353 (548)
Q Consensus 277 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~---~~~~~~~~~ii~~~~ 353 (548)
..+..... | .+ ........ ...+...++ .++. .+.....+..++...
T Consensus 230 ---~~~~~~~~-----------------~-~~-~~~~~~~~----p~~~~~~~g----~~~~~~g~~~~~~~~g~~ig~~ 279 (1140)
T PRK06814 230 ---AILGISWF-----------------W-LV-GAVVLSQL----PLLAKETLG----GDENVATLFLAVFSVGVAVGSF 279 (1140)
T ss_pred ---HHHHHHHH-----------------H-HH-HHHHHHHh----HHHHHHHcC----CchHHHHHHHHHHHHHHHHHHH
Confidence 00000000 0 00 00000000 111111111 2221 222333333333322
Q ss_pred HHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHH
Q 008934 354 LYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGL 433 (548)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 433 (548)
+.+++.++ ....+.+..+.++.+++.+.+.+... ........+..-..-....+.|.+.+..+++|+
T Consensus 280 --------~~g~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (1140)
T PRK06814 280 --------LASKLSEG---RITLLYVPIGALLMGLFGLDLAFASS--SVPAEPAQLKSILVFLSKRHGWRILIDLFGLAA 346 (1140)
T ss_pred --------HHHHHhCC---ceeeeeehHHHHHHHHHHHHHHhccc--ccccccccccchhhhhcccccHHHHHHHHHHHH
Confidence 23333333 22223344455555444443332100 000000000000000001256677788899999
Q ss_pred HHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 434 AMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVD 481 (548)
Q Consensus 434 g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~ 481 (548)
+.++.+++..+++.+.+|++.+|.++|+.++..++|..+|+.+.+.+.
T Consensus 347 ~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 347 AGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988865
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=9.8e-17 Score=173.43 Aligned_cols=385 Identities=13% Similarity=0.058 Sum_probs=228.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccc-----cchHH-HHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYV-----GRYRM-IGF 89 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~-----Grk~~-~~~ 89 (548)
+|....++...+......+.....++.|++ +.|.+..+.+... ..... .+..++.|.++|| + ||||. +.+
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDR-YTPPFLGRRRGWLLA 86 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHc-ccccCCCCchHHHHH
Confidence 455677777888888888888889999966 5699999999862 22233 3688999999999 6 99886 556
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccch
Q 008934 90 GCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKG 169 (548)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
+.+...++...+++.. | ..+.+.+.+.+++.+++.+...+...++..|++|+++
T Consensus 87 ~~i~~~~~~~~~a~~~--~------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------ 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE--P------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------ 140 (491)
T ss_pred HHHHHHHHHHHHHHcC--C------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------
Confidence 6666666666665532 1 1257778888999999999999999999999999744
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhh-ccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCch-hHHHHHHHH
Q 008934 170 ALQSYFSWYYVFVSASSIVAVTCIVYIQD-NLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLP-GLTQVLVAS 247 (548)
Q Consensus 170 ~r~~~~~~~~~~~~ig~~~gp~i~~~l~~-~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 247 (548)
|+++.++...+.++|.++++.+++++.+ ..|||..|++.++..++..+..+.. ++.++++++++... ...+.+...
T Consensus 141 -rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~-~e~~~~~~~~~~~~~~~~~~l~~~ 218 (491)
T PRK11010 141 -RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLA-PEPTDTIPVPKTLEQAVVAPLRDF 218 (491)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc-CCCccccccccchhhhHHHHHHHH
Confidence 8999999999999999999999999988 4699999999887666655444332 22111111111000 000000001
Q ss_pred HhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccC
Q 008934 248 FKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDR 327 (548)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (548)
++++. ....+-..... ........... ...+..
T Consensus 219 ~~~~~-------------------------~~~~ll~~~l~------------------~~~~~~~~~~~----~~~l~~ 251 (491)
T PRK11010 219 FGRNN-------------------------AWLILLLIVLY------------------KLGDAFAMSLT----TTFLIR 251 (491)
T ss_pred HcCcC-------------------------HHHHHHHHHHH------------------HHHHHHHHHHH----HHHHHH
Confidence 11000 00000000000 00000000000 111111
Q ss_pred CCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 328 HVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINE 407 (548)
Q Consensus 328 ~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~ 407 (548)
..| .+.............+...+...+...+.+| .+.++.+.++.++.+++.+.+.....
T Consensus 252 ~~G----~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-------~g~~~~l~i~~~l~~l~~l~~~~l~~--------- 311 (491)
T PRK11010 252 GVG----FDAGEVGLVNKTLGLLATIVGALYGGILMQR-------LSLFRALMIFGILQGVSNAGYWLLSI--------- 311 (491)
T ss_pred hcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 112 3333333322111111111111122223334 33334455555554544433222110
Q ss_pred CCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 008934 408 GISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRG 487 (548)
Q Consensus 408 ~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~ 487 (548)
...+.+.+.....+..+..++..+.......+.+|++.+++.+|+.+...++|..+++.++|.+.+..
T Consensus 312 ---------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~--- 379 (491)
T PRK11010 312 ---------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH--- 379 (491)
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 00134444445556555566666777788888899999999999999999999998888888876432
Q ss_pred CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhh
Q 008934 488 GNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACC 524 (548)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 524 (548)
++...|.+.+++.+++++..+.+.
T Consensus 380 -------------G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 380 -------------GWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred -------------ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 256778888888888877776653
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.80 E-value=2.1e-17 Score=171.31 Aligned_cols=166 Identities=16% Similarity=0.139 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.++......++.....+...+.+|.|+++++|+|+.+.+++.+++.++..++++++|+++||+ ||||++.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345566667777778888888888889999999999999999999999999999999999996 9999999999999998
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
.+++..+. .+.+.+++.|+++|++.+. .+...++++|.+|+++ |+++.++
T Consensus 81 ~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~-------r~~~~~~ 130 (366)
T TIGR00886 81 CLWAGLAV----------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI-------QGTALGL 130 (366)
T ss_pred HHHHHHHh----------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh-------hhHHHHH
Confidence 88877643 0467788899999999665 4567889999998844 8999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh----------ccCchhhh-HHHHHHHH
Q 008934 178 YYVFVSASSIVAVTCIVYIQD----------NLGWKVGF-GVPAVIML 214 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~~----------~~g~~~~f-~i~~~~~~ 214 (548)
.....++|..+++.+++.+.+ +.+|++.| ...++...
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 888888888888877776654 24899999 44344333
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.79 E-value=3.4e-16 Score=165.03 Aligned_cols=167 Identities=15% Similarity=0.114 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccchH-HHHHHHHHHHHH
Q 008934 23 IANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY----VGRYR-MIGFGCFTCLLG 97 (548)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~----~Grk~-~~~~~~~~~~~~ 97 (548)
+...+.+...+.-...-+|.|++ +.|+|.++.|++..+... .+..+++|+++||+ +|||| .+.++.++.+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 34555666677777788999988 459999999999766655 68999999999994 17776 677777777777
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..++.+.. . ..+.+.+.+..++.+...+...+...+++.|.+|+++ |+++.++
T Consensus 82 ~~~l~~~~---~-----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-------r~~~~~~ 134 (402)
T PRK11902 82 IAAMAFCP---P-----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE-------RGAGAAV 134 (402)
T ss_pred HHHHHhcC---c-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh-------hhHHHHH
Confidence 77666542 0 1246667767677788888889999999999998844 8999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-cCchhhhHHHHHHHHHHHHH
Q 008934 178 YYVFVSASSIVAVTCIVYIQDN-LGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~~~-~g~~~~f~i~~~~~~i~~~~ 219 (548)
...+.++|.++++.+++++.+. .||+..|++.++..++..+.
T Consensus 135 ~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 135 KVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998885 49999999988766655443
No 82
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.78 E-value=4.3e-16 Score=164.61 Aligned_cols=173 Identities=13% Similarity=0.119 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
++.+....+...+.+....+.+| .+++++|+|+.++|++.+.+.++..+++++.|++.||+ ||||++.++.+++.++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~-~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVP-QFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 34444455555555543345554 55999999999999999999999999999999999996 99999999999999988
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.+...+.. ..+.+.+++.|++.|+|.|...+..++++.+..|+++ |++..++.
T Consensus 83 ~l~~~~~~--------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 135 (410)
T TIGR00885 83 FLFWPAAE--------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST-------ATRRLNLA 135 (410)
T ss_pred HHHHHHHh--------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH-------HHHHHHHH
Confidence 77654320 1257888999999999999999999999999988744 78889999
Q ss_pred HHHHHHHHHHHHHHHHHhhh--------------------------ccCchhhhHHHHHHHHHHHHHH
Q 008934 179 YVFVSASSIVAVTCIVYIQD--------------------------NLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~--------------------------~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
+...++|..+||.+++.+.. ..+||.+|.+.+++.++..++.
T Consensus 136 ~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 136 QSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887742 2369999988777655544333
No 83
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.78 E-value=2e-16 Score=163.76 Aligned_cols=149 Identities=15% Similarity=0.176 Sum_probs=123.0
Q ss_pred HhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 008934 34 VGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPP 113 (548)
Q Consensus 34 ~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 113 (548)
..+.+.+| .+++++|+|+++++++.+.+.++..++.++.|+++||+ ||||++.++.++..++.... ..+
T Consensus 17 ~~~~~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~~-------- 85 (355)
T TIGR00896 17 TSVGPLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SAP-------- 85 (355)
T ss_pred ccCcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hhc--------
Confidence 33445555 45779999999999999999999999999999999996 99999999998877776665 333
Q ss_pred CcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 114 ACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCI 193 (548)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~ 193 (548)
+.+.+++.|++.|+|.+...+..+.++.|.+|+ + |++++++.+...++|..+++.++
T Consensus 86 ---------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 86 ---------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R-------VGLMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred ---------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h-------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999999888888888888863 2 79999999999999999999999
Q ss_pred HHhhhcc--CchhhhHHHHHHHHHH
Q 008934 194 VYIQDNL--GWKVGFGVPAVIMLLS 216 (548)
Q Consensus 194 ~~l~~~~--g~~~~f~i~~~~~~i~ 216 (548)
+.+.++. +|+..|.+.++..++.
T Consensus 143 ~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 143 VPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 9887765 3898887766544433
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.78 E-value=1.1e-16 Score=166.64 Aligned_cols=157 Identities=17% Similarity=0.156 Sum_probs=115.2
Q ss_pred HHHHHHhHhhc--CChhHHHHHHHH-----HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 008934 39 NMILYLCREYN--METTAATNIIFI-----WTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAK 111 (548)
Q Consensus 39 ~l~~yl~~~lg--~s~~~ag~i~~~-----~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~ 111 (548)
++..++.+++. .++++.+.+.+. ..+...+++++.|+++||+ ||||++.++.++..++..++.++.+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~-- 90 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT-- 90 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh--
Confidence 35555555544 445555554443 2233346789999999996 9999999999999999888887552111
Q ss_pred CCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 008934 112 PPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVT 191 (548)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~ 191 (548)
........+++.|+++|++.+...+...+++.|.+|+++ |++..++.+....+|..+++.
T Consensus 91 -------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~-------r~~~~~~~~~~~~~G~~i~~~ 150 (394)
T TIGR00883 91 -------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK-------RGFYGSFQQVGAPVGLLLAAL 150 (394)
T ss_pred -------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc-------chHHHHHHHHHHHHHHHHHHH
Confidence 000012357888999999999999999999999999854 899999999999999999998
Q ss_pred HHHHhh--------hccCchhhhHHHHHHHHHHHH
Q 008934 192 CIVYIQ--------DNLGWKVGFGVPAVIMLLSAL 218 (548)
Q Consensus 192 i~~~l~--------~~~g~~~~f~i~~~~~~i~~~ 218 (548)
+++.+. +.++|+.+|.+.++..+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 151 TVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 776653 356899999887765554443
No 85
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.78 E-value=2.8e-16 Score=167.03 Aligned_cols=435 Identities=11% Similarity=0.042 Sum_probs=247.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhc---cccchHHHHHH-HHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADS---YVGRYRMIGFG-CFTC 94 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr---~~Grk~~~~~~-~~~~ 94 (548)
...+....+.-.+++-...++++.|+ +++|.++..++++..+..+...+.+|+.|+++|| ++||||.++++ .+..
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~ 84 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHH
Confidence 44455566666777777788888886 5899999999999999999999999999999995 24999999885 4455
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++..+++.+.+...... ++.+ ........+..+++..+..++.....+...++++|.+|++++ +++.+
T Consensus 85 ~~~l~ll~~~~~~~~~~~---~~~~---~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~-----~~~~a 153 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFG---DNLD---KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR-----RTRIA 153 (477)
T ss_pred HHHHHHHHhCchhhhhcc---cccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH-----HHHHH
Confidence 556666665442211100 0000 000001123445555566678888888999999999998652 24689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--hhcc-------------CchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC-----
Q 008934 175 FSWYYVFVSASSIVAVTCIVYI--QDNL-------------GWKVGFGVPAVIMLLSALSFFLASPFYVKSKANT----- 234 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l--~~~~-------------g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~----- 234 (548)
+++.....++|+++|+.++++. .+.. +.+..|++.+++.+++.++..+..++++..++++
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~ 233 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE 233 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh
Confidence 9999999999999999998865 2211 5688999988888877777666555543211110
Q ss_pred ------CCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccc
Q 008934 235 ------SLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLC 308 (548)
Q Consensus 235 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (548)
+......+.++.++++ +|+ .-.. +-....+.|+..-... ++
T Consensus 234 ~~~~~~~~~~~~~~~i~~~~~~----mP~-~m~~----------l~~vqffsW~a~f~~~------------------~y 280 (477)
T TIGR01301 234 AAPPSKHGEEAFFGELFGAFKY----LPR-PVWI----------LLLVTCLNWIAWFPFI------------------LF 280 (477)
T ss_pred cccccccchhhhHHHHHHHHHH----CCH-HHHH----------HHHHHHHHHHHHHHHH------------------Hh
Confidence 0001111222222222 111 0000 0011112222211110 11
Q ss_pred hHHHHHHHHHHHHHhhccCCCCCCceec-CcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHH
Q 008934 309 TVEQVEELKALIKASSMDRHVTPNFEIP-SGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFST 387 (548)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~lg~~~~i~-~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~ 387 (548)
....+.+ ..++...-+.... .-++. ..+-...+.+... +++.++.++.++.+. .++.-.++.++.+
T Consensus 281 ~T~~vg~--~v~~~~~~~~~~y-~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~g~------~k~~~~~s~~~~~ 347 (477)
T TIGR01301 281 DTDWMGR--EVYGGSVNQGAKY-DDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGWGA------GKRLWGIVNIILA 347 (477)
T ss_pred ccHHHHH--HHcCCCCcchhHH-HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcc------chhHHHHHHHHHH
Confidence 1111100 0000000000000 00000 0011122222222 222223333333221 2344478888899
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCcccccccc-hHHHHHHHHHHHHHHHHHhhhhhhhcccccCc--hhhHHHHHHHHH
Q 008934 388 ASMTAWAIVEAARRSIAINEGISDDLRAVVQMS-AMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK--SMSSIASTLSGA 464 (548)
Q Consensus 388 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~--~~rg~~~g~~~~ 464 (548)
+|+....+.....++..++++- ++--...+. -+..+..+.+.|+..+..+...++++.+..|+ +..|.++|+.|.
T Consensus 348 ~~l~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~ 425 (477)
T TIGR01301 348 ICLAATVLVTYVAKNSRYYDGD--GESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNL 425 (477)
T ss_pred HHHHHHHHHHhhhhcccccccc--ccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHH
Confidence 8988887765211111011100 000001112 35677788999999999999999999999995 455999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 465 GLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 465 ~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
+-.+...+.....|.+....+. +...++.+.++.++++.+..+..-++.
T Consensus 426 ~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 426 AIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999988886644431 124556777777777777666554443
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.78 E-value=7.3e-17 Score=166.99 Aligned_cols=334 Identities=12% Similarity=0.040 Sum_probs=194.3
Q ss_pred HHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc----ccchHHH-HHHHHHHHHHHHHHHHhcccCCCCC
Q 008934 38 PNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY----VGRYRMI-GFGCFTCLLGMVLLWSTTILPGAKP 112 (548)
Q Consensus 38 ~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~----~Grk~~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 112 (548)
......+.+++|+|.++.+++... .+...+ .++.|.++||+ +||||.+ ..+.++..+....+.+.. .
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~---~--- 79 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV---P--- 79 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC---c---
Confidence 333444466889999999999655 444444 89999999995 3899975 556666666655555432 1
Q ss_pred CCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 113 PACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTC 192 (548)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i 192 (548)
..+.+.+....++.+++.+...+...+++.|.+|++ +|+++.++...+.++|.++++.+
T Consensus 80 --------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-------~r~~~~~~~~~~~~~G~~~~~~l 138 (356)
T TIGR00901 80 --------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDE-------ELGYGSTIYIVGYRAGMLLSGSL 138 (356)
T ss_pred --------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh-------hhchHHHHHHHHHHHHHHHHHHH
Confidence 125566666677788888888899999999999884 48999999999999999999999
Q ss_pred HHHhhhccC--------chhhhHHHHHHHHHHHHHHHhcCCceeccCCCCC-CchhHHHHHHHHHhhccCCCCCcchhhh
Q 008934 193 IVYIQDNLG--------WKVGFGVPAVIMLLSALSFFLASPFYVKSKANTS-LLPGLTQVLVASFKNRRTKLPTQATEEM 263 (548)
Q Consensus 193 ~~~l~~~~g--------~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (548)
++++.++.| ||.+|++.++..+++.+..+...++..+++++++ +..+....+....+++...
T Consensus 139 ~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 209 (356)
T TIGR00901 139 ALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMI--------- 209 (356)
T ss_pred HHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCch---------
Confidence 999988888 9999999888776655544433333211111111 1111111111111111100
Q ss_pred hhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcccchh
Q 008934 264 YHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIF 343 (548)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~ 343 (548)
.....+-..... ............ ....+ .| .+++....+
T Consensus 210 -------------~~~~~~~~~~~~------------------~~~~~~~~~~~~---~~l~~--~g----~~~~~~g~~ 249 (356)
T TIGR00901 210 -------------QALLLLLLIVLY------------------KLGDSAATVLTT---LFLLD--MG----FSKEEIALV 249 (356)
T ss_pred -------------HHHHHHHHHHHH------------------HHHHHHHHHHHH---HHHHH--cC----CCHHHHHHH
Confidence 000000000000 000001111111 11111 22 233332222
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHH
Q 008934 344 AILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMW 423 (548)
Q Consensus 344 ~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 423 (548)
......+...+ ......++.+| .++++.+..+.++.+++.....+.... . ...+ ....+.+.
T Consensus 250 ~~~~~~~~~~~----g~~~~g~l~~r---~g~~~~l~~~~~~~~~~~~~~~~~~~~-------~-~~~~---~~~~~~~~ 311 (356)
T TIGR00901 250 AKINGLLGAIL----GGLIGGIIMQP---LNILYALLLFGIVQALTNAGFVWLASN-------G-HHDG---ITFPHLLM 311 (356)
T ss_pred hHHHHHHHHHH----HHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHHHhc-------C-cccc---cccchHHH
Confidence 22111111111 22223334444 666667777887777776655443200 0 0000 00024566
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHH
Q 008934 424 QLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLS 467 (548)
Q Consensus 424 ~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 467 (548)
++...++.++++++.++...++..+.+|+++||+++|+.+...+
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 312 LFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 77778888999999999999999999999999999999877654
No 87
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=6.7e-16 Score=161.78 Aligned_cols=387 Identities=16% Similarity=0.090 Sum_probs=224.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMV 99 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~ 99 (548)
.++....++..+.+-...++++.|++ +.|+|..|.|.+.+...+...+.+++.|+++||+..+||++.++.++..+...
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~ 83 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALL 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHH
Confidence 45556677777788888899999988 57899999999999999999999999999999974567888777766655554
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY 179 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 179 (548)
+....+ +.+.++....+..+......|...++..+...+.+.+ =-|.|..
T Consensus 84 ~~~~~~-----------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~---YG~iRlw---- 133 (400)
T PF03825_consen 84 LLAFSS-----------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKD---YGRIRLW---- 133 (400)
T ss_pred HHHHhc-----------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCC---CCcchhh----
Confidence 444433 4566666677778888888888888888777643211 0133333
Q ss_pred HHHHHHHHHHHHH-HHHhhhcc---CchhhhHHHHHHHHHHHHHHHhcCCcee-ccCCCCCCchhHHHHHHHHHhhccCC
Q 008934 180 VFVSASSIVAVTC-IVYIQDNL---GWKVGFGVPAVIMLLSALSFFLASPFYV-KSKANTSLLPGLTQVLVASFKNRRTK 254 (548)
Q Consensus 180 ~~~~ig~~~gp~i-~~~l~~~~---g~~~~f~i~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (548)
+++|.+++... ++++.... +....+++.+...++..... +..|+.+ +++.+++..+...+.....+|+++..
T Consensus 134 --GSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~ 210 (400)
T PF03825_consen 134 --GSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFL 210 (400)
T ss_pred --hhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcccccchHHHHHhcCccHH
Confidence 33444443222 22222222 22345555554333222222 2223222 11111111111111112223332211
Q ss_pred CCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHH-HHHHHHHHHhhccCCCCCCc
Q 008934 255 LPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQV-EELKALIKASSMDRHVTPNF 333 (548)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~ 333 (548)
. ++-... ..+. ......+-...++...|
T Consensus 211 ~-------------------------Fll~~~-----------------------l~~~~~~~~~~f~~~yl~~~gg--- 239 (400)
T PF03825_consen 211 V-------------------------FLLAAF-----------------------LIGISHAAYYTFFSIYLQELGG--- 239 (400)
T ss_pred H-------------------------HHHHHH-----------------------HHHHHHHHHHHHHHHHHHHccc---
Confidence 1 110000 0000 00000000111111100
Q ss_pred eecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 008934 334 EIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDL 413 (548)
Q Consensus 334 ~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (548)
.+ .-+.........+.+..+.-..+|+.+| ++.++.+.++.++.++=+.+++....
T Consensus 240 -~~-----~~~~g~~~~l~~~aEi~~f~~~~~~~~r---~g~~~ll~~a~~~~~vR~~l~a~~~~--------------- 295 (400)
T PF03825_consen 240 -YS-----GSTIGILWALGVVAEIPFFFFSGRFLKR---FGIKWLLLLALVAYAVRWLLYAYFSD--------------- 295 (400)
T ss_pred -ch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhcC---------------
Confidence 11 1111112223333444455556777777 88999999999999999999887630
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 008934 414 RAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAG-LSAANLVASLIMNAVDDITKRGGNGGW 492 (548)
Q Consensus 414 ~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~~g~~lg~~~~~~i~~~~~~~~~~~~ 492 (548)
+.......+.....+.|+..++...+...++.+.+|++.|+++||+++.. .++|+.+|+.+.|.+.+..+.++
T Consensus 296 --~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~---- 369 (400)
T PF03825_consen 296 --PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG---- 369 (400)
T ss_pred --CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh----
Confidence 00001112233446799999999999999999999999999999998765 67999999999998765443111
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 493 IPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 493 ~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
. -.+..++.+.+++.++..+++++..|++
T Consensus 370 ~------~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 370 M------FDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred h------hhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 0 0134456666777777777777665544
No 88
>PRK09848 glucuronide transporter; Provisional
Probab=99.77 E-value=3.8e-16 Score=167.04 Aligned_cols=359 Identities=13% Similarity=0.051 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchHHH-HHHHHHHHHHH
Q 008934 23 IANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY---VGRYRMI-GFGCFTCLLGM 98 (548)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~~-~~~~~~~~~~~ 98 (548)
-+..+..++.+..+.++++.|+++.+|+++.++|.+..+..+...+..|+.|+++||. +||||.+ .++.+...+..
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~ 93 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFS 93 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHH
Confidence 3456677788877888899999999999999999999999999999999999999993 3777755 44555444444
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.++... |. ....+...+..++...+.+++.+...+...++..+..++.+ +|.+..++.
T Consensus 94 ~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------~r~~~~~~r 151 (448)
T PRK09848 94 VLVFWV---PT-------------DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ------SRARLGAAR 151 (448)
T ss_pred HHHHhC---cC-------------CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH------HHHHHHHHH
Confidence 433211 11 00001123445556677888899988888888777776643 377776665
Q ss_pred HHH-----HHHHHHHHHHHHHHhhhccCchhhh--HHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhc
Q 008934 179 YVF-----VSASSIVAVTCIVYIQDNLGWKVGF--GVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNR 251 (548)
Q Consensus 179 ~~~-----~~ig~~~gp~i~~~l~~~~g~~~~f--~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (548)
.+. .+++..++|.+.+...+.....+.. .+.+++.++..++.....++...++.+ + +...+.....++++
T Consensus 152 ~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~-~--~~~~~~~~~l~~n~ 228 (448)
T PRK09848 152 GIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA-Q--PSLKISLQTLKRNR 228 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-C--CCHHHHHHHHhCCc
Confidence 543 3456666666655432211111111 112222222222222222222111111 1 12222222222332
Q ss_pred cCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCC
Q 008934 252 RTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTP 331 (548)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 331 (548)
.+... .....+..... ... ... ........++
T Consensus 229 ~f~~~--------------------~~~~~~~~~~~-----------------------~~~---~~~-~~~~~~~~~g- 260 (448)
T PRK09848 229 PLFML--------------------CIGALCVLIST-----------------------FAV---SAS-SLFYVRYVLN- 260 (448)
T ss_pred hHHHH--------------------HHHHHHHHHHH-----------------------HHH---hhh-heeeEeeecC-
Confidence 21100 00000000000 000 000 0000111111
Q ss_pred CceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 008934 332 NFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISD 411 (548)
Q Consensus 332 ~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 411 (548)
.++. ..........+...+..++.+++.+| .+.++.+.+|.++.+++.+.+.+..
T Consensus 261 ---~~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~r---~g~~~~~~~g~~~~~i~~~~~~~~~-------------- 315 (448)
T PRK09848 261 ---DTGL-----FTVLVLVQNLVGTVASAPLVPGMVAR---IGKKNTFLIGALLGTCGYLLFFWVS-------------- 315 (448)
T ss_pred ---ChHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH---hCcHHHHHHHHHHHHHHHHHHHHcC--------------
Confidence 1110 01111111111122244555666655 6777788889888888876665421
Q ss_pred CcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCch-------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008934 412 DLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKS-------MSSIASTLSGAGLSAANLVASLIMNAVDDIT 484 (548)
Q Consensus 412 ~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~-------~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~ 484 (548)
..+.+.+.+..++.++|+++..+..+++..+.+|.+ .+|.++|++++.+.+|..+|+.+.+.+....
T Consensus 316 ------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 316 ------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 125666677788899999999999999998888765 4699999999999999999999999876655
Q ss_pred c
Q 008934 485 K 485 (548)
Q Consensus 485 ~ 485 (548)
+
T Consensus 390 G 390 (448)
T PRK09848 390 G 390 (448)
T ss_pred C
Confidence 4
No 89
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=9.6e-16 Score=155.37 Aligned_cols=395 Identities=12% Similarity=0.053 Sum_probs=262.6
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH
Q 008934 11 NPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFG 90 (548)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (548)
.++.+.|..+..... +.-.+........+..++++++|+|+.|.+++..+..+...+..++-|.+.||+ |.|++..++
T Consensus 8 ~k~~~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s 85 (417)
T COG2223 8 GKRIARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILS 85 (417)
T ss_pred cccchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHH
Confidence 345556666654443 333444455666777788999999999999999999999999999999999996 999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchh
Q 008934 91 CFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGA 170 (548)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (548)
.++..+-.+...++...| +.+.+++...+.|++.+- .+...+++++.+|+++
T Consensus 86 ~~l~~IP~~~~~~a~~~~--------------------~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~------- 137 (417)
T COG2223 86 MLLLLIPCLGLAFAVTYP--------------------STWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEK------- 137 (417)
T ss_pred HHHHHHHHHHHHHHccCC--------------------chHHHHHHHHHHhcccce-ehcccccccccCChhh-------
Confidence 999888888888766222 347888888889988655 6788899999999955
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccC---chhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHH
Q 008934 171 LQSYFSWYYVFVSASSIVAVTCIVYIQDNLG---WKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVAS 247 (548)
Q Consensus 171 r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g---~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (548)
++.+++++. ..|+|..+...++.++....| |+.+..+..+..++..+..++..+..+.++++.++... .-+...
T Consensus 138 qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--~~~~~v 214 (417)
T COG2223 138 QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--AQLKAV 214 (417)
T ss_pred hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--hHHHHH
Confidence 899999999 899999999999999998888 99988888887777666666554433222222111110 000000
Q ss_pred HhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccC
Q 008934 248 FKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDR 327 (548)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (548)
.++++ .|. .. +-+.. +.-..-.....+ +.....
T Consensus 215 ~~~~~----------~W~-----------ls---llY~~----------------------tFG~Fvgfs~~l-~~~~~~ 247 (417)
T COG2223 215 FSNKD----------TWL-----------LS---LLYFA----------------------TFGGFVGFSAYL-PMYLVT 247 (417)
T ss_pred hcCcc----------hHH-----------HH---HHHHH----------------------HHHHHHHHHHHH-HHHHHH
Confidence 00000 000 00 00000 000000000000 111112
Q ss_pred CCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 328 HVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINE 407 (548)
Q Consensus 328 ~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~ 407 (548)
+.+ .. ...........|+...+.-|+.+++.|| .+..+...+.++.++++......... .+
T Consensus 248 ~fg----~~-----~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR---~Gg~rv~~~~f~~~~~~~~~l~~~~~-------~~ 308 (417)
T COG2223 248 QFG----LS-----PVTAGLIAFLFPLIGALARPLGGWLSDR---IGGRRVTLAVFVGMALAAALLSLFLT-------GF 308 (417)
T ss_pred hcC----CC-----hhhHHHHHHHHHHHHHHHHhccchhhhh---ccchhHHHHHHHHHHHHHHHHHcccc-------cc
Confidence 211 21 2222244555666677788889999998 89999999988888888888776530 00
Q ss_pred CCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 008934 408 GISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRG 487 (548)
Q Consensus 408 ~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~ 487 (548)
....+.+..+..++...+..++-+-..+.++....|+ +.|.+.|+.....++|++.-|...+...+.+
T Consensus 309 --------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t--- 376 (417)
T COG2223 309 --------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT--- 376 (417)
T ss_pred --------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhc---
Confidence 0112444455555555555566555566666666655 5788999999999999888787777755433
Q ss_pred CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008934 488 GNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYG 528 (548)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 528 (548)
+.+...|+++..+.+++.+..+..+.|.+
T Consensus 377 ------------g~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 377 ------------GSYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34677899999999999888887776653
No 90
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=7.9e-16 Score=164.42 Aligned_cols=358 Identities=7% Similarity=0.031 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchHHHH-HHHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY---VGRYRMIG-FGCFTCLLGMV 99 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~~~-~~~~~~~~~~~ 99 (548)
+..+..++.+..+..+++.|+++.+|+|+.++|.+..+..+.-.+..|+.|+++||. +||||..+ .+.+...+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344566666777788999999999999999999999999999999999999999992 38866555 55566666655
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY 179 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 179 (548)
++...+ .. ......+.+++...+.+++.........++.+|..++.+ +|.+..++..
T Consensus 96 l~f~~p---~~--------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~------eR~~l~~~r~ 152 (444)
T PRK09669 96 LTFYTP---DF--------------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR------ERHSLQSWRF 152 (444)
T ss_pred HHHhCC---CC--------------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH------HHHHHHHHHH
Confidence 544322 10 001234556666667777777777778899999886543 4888888888
Q ss_pred HHHHHHHHHHHHHHHHhhh-------ccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhcc
Q 008934 180 VFVSASSIVAVTCIVYIQD-------NLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRR 252 (548)
Q Consensus 180 ~~~~ig~~~gp~i~~~l~~-------~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (548)
...++|..+++.+...+.. ..||+..+.+.+++.++..++.+...++..+++ + ++..+..+.+...++++.
T Consensus 153 ~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~-~-~~~~~~~~~~~~~~~n~~ 230 (444)
T PRK09669 153 ALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE-V-DNSSSVWKDLKLLLGNSQ 230 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC-C-cCCCCHHHHHHHHhCCch
Confidence 8888888887765443332 236777777666655555444443333221111 1 111122222223333322
Q ss_pred CCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCC
Q 008934 253 TKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPN 332 (548)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 332 (548)
+... .....+.... ..... .. ........++
T Consensus 231 ~~~l--------------------~~~~~~~~~~------------------------~~~~~--~~-~~y~~~~~~~-- 261 (444)
T PRK09669 231 WRIM--------------------FIFNVVLLTA------------------------VVTRG--GA-TLYYVNYVLL-- 261 (444)
T ss_pred HHHH--------------------HHHHHHHHHH------------------------HHHHh--hh-hheeeeeecC--
Confidence 1110 0000000000 00000 00 0001111111
Q ss_pred ceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 008934 333 FEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDD 412 (548)
Q Consensus 333 ~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 412 (548)
............. +...+..++..++.+| .+.++.+.+++++.+++...+....
T Consensus 262 ----~~~~~~~~~~~~~----i~~ii~~~~~~~l~~r---~gk~~~~~~~~~~~~~~~~~~~~~~--------------- 315 (444)
T PRK09669 262 ----RPDLATLFLVTGM----IAGLFGALLSERLLGK---FDRVRAFKWTIVAFVILSALIFFIP--------------- 315 (444)
T ss_pred ----CHHHHHHHHHHHH----HHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence 1111110000001 1111122333344444 4444556666655554333322221
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccC-------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008934 413 LRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELP-------KSMSSIASTLSGAGLSAANLVASLIMNAVDDITK 485 (548)
Q Consensus 413 ~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~ 485 (548)
.-+.+.+.+..++.+++++...+..+++..+.+| +++.|...|++++...+|.++|+.+.+.+.+..+
T Consensus 316 -----~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 316 -----PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred -----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1145556667788999999999999999988876 3456788999999999999999999998876665
Q ss_pred C
Q 008934 486 R 486 (548)
Q Consensus 486 ~ 486 (548)
.
T Consensus 391 y 391 (444)
T PRK09669 391 Y 391 (444)
T ss_pred C
Confidence 4
No 91
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.72 E-value=2.3e-15 Score=162.15 Aligned_cols=359 Identities=10% Similarity=0.064 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhh----ccccchHHHH-HHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLAD----SYVGRYRMIG-FGCFTCLLGM 98 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laD----r~~Grk~~~~-~~~~~~~~~~ 98 (548)
+..+..++.+..+.++++.|+++.+|+++..+|.+..+.-+.-.+..|+.|+++| |+ ||||.++ ++.....++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 3455667777788899999999999999999999999999999999999999999 64 9965544 4666666665
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.++...+..+ .+...+.+.+...+.+++.........++..|..++.+ +|.+.+++.
T Consensus 92 ~llf~~p~~~-----------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~------eR~~l~~~~ 148 (473)
T PRK10429 92 FLLFSAHLFE-----------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR------EREQLVPYP 148 (473)
T ss_pred HHHHcCCCCC-----------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH------HHHHHHHHH
Confidence 5554322000 01134455666667788888888899999999886543 489999987
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-------cCchhhhHHHHHHHHHHHHHHHhcCCceeccC---CCCCCchhHHHHHHHHH
Q 008934 179 YVFVSASSIVAVTCIVYIQDN-------LGWKVGFGVPAVIMLLSALSFFLASPFYVKSK---ANTSLLPGLTQVLVASF 248 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~~-------~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 248 (548)
....++|+.+.+.+...+.+. .+|+....+.+++.++..+..+...++..+.+ +++++..+..+.+....
T Consensus 149 ~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (473)
T PRK10429 149 RFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIY 228 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHh
Confidence 777788766665554433221 24555555555554444444443333321110 11111111222222222
Q ss_pred hhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCC
Q 008934 249 KNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRH 328 (548)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (548)
+|+.+... ....++... .......+........
T Consensus 229 ~n~~~~~l--------------------l~~~~~~~~---------------------------~~~~~~~~~~y~~~y~ 261 (473)
T PRK10429 229 KNDQLSCL--------------------LGMALAYNI---------------------------ASNIINGFAIYYFTYV 261 (473)
T ss_pred cCHHHHHH--------------------HHHHHHHHH---------------------------HHHHHhhheeeEEEEE
Confidence 22211100 000000000 0000000000011111
Q ss_pred CCCCceecCcc---cchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 329 VTPNFEIPSGS---FNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAI 405 (548)
Q Consensus 329 lg~~~~i~~~~---~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~ 405 (548)
++ ..+. +..+..+..++ ..+++.++.+| ++.++.+.++.++..++.+.+.....
T Consensus 262 ~~-----~~~~~~~~~~~~~i~~ii--------~~~~~~~l~~r---~gkk~~~~~~~~~~~~~~~~~~~~~~------- 318 (473)
T PRK10429 262 IG-----DADLFPYYLSYAGAANLV--------TLILFPRLVKS---LSRRILWAGASIFPVLSCGVLLLMGL------- 318 (473)
T ss_pred CC-----CHHHHHHHHHHHHHHHHH--------HHHHHHHHHHH---cCcHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 11 0111 11112222222 33344444444 56666677777766655555433210
Q ss_pred hcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccC-------chhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 406 NEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELP-------KSMSSIASTLSGAGLSAANLVASLIMN 478 (548)
Q Consensus 406 ~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~~g~~lg~~~~~ 478 (548)
. .+.+.+.+++..++.+++.+..++...++..+.+| ++..|.+.|.+.+..-+|..+|+.+.|
T Consensus 319 ----~------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 319 ----A------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred ----c------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01145566667788899999999988888888877 455677999999999999999999999
Q ss_pred HhhhhhcC
Q 008934 479 AVDDITKR 486 (548)
Q Consensus 479 ~i~~~~~~ 486 (548)
.+.+..+.
T Consensus 389 ~~l~~~Gy 396 (473)
T PRK10429 389 VVLGLIGY 396 (473)
T ss_pred HHHHHcCC
Confidence 87765543
No 92
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.72 E-value=4.9e-15 Score=154.15 Aligned_cols=155 Identities=13% Similarity=0.064 Sum_probs=134.8
Q ss_pred hHHHHHHHHhHhhcCChhH-HHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008934 36 FTPNMILYLCREYNMETTA-ATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPA 114 (548)
Q Consensus 36 ~~~~l~~yl~~~lg~s~~~-ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 114 (548)
..++...|+.+++|+++++ .|.+.++++.++.+..+++|+++||+ |.|+++.++.+.+.+..++..++.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~--------- 113 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT--------- 113 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 3467788999999999999 99999999999999999999999995 999999999999999999999876
Q ss_pred cccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 115 CDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIV 194 (548)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~ 194 (548)
+...+.+.|++.|++.|... +...++..++|+ ++|+++.++...+.++|.++++++++
T Consensus 114 --------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~-------kER~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 114 --------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP-------SRYQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999 999999999998 55999999999999999999999999
Q ss_pred HhhhccCchhhhH---HHHHHHHHHHHHHHhc
Q 008934 195 YIQDNLGWKVGFG---VPAVIMLLSALSFFLA 223 (548)
Q Consensus 195 ~l~~~~g~~~~f~---i~~~~~~i~~~~~~~~ 223 (548)
++ ..+||+.-+. +......+++++.++.
T Consensus 172 ll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 172 LL-VTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HH-HhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 94 4578875443 4444455555554443
No 93
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72 E-value=2.6e-16 Score=157.38 Aligned_cols=149 Identities=19% Similarity=0.128 Sum_probs=136.4
Q ss_pred HhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCC
Q 008934 46 REYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESA 125 (548)
Q Consensus 46 ~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (548)
..++-+.++.|++..++.+...+..|+.|.+.||+ |+|-.+++|++++...++++++..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~-------------------- 157 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGN-------------------- 157 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcc--------------------
Confidence 45778889999999999999999999999999995 999999999999999999999876
Q ss_pred CccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhh
Q 008934 126 TWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVG 205 (548)
Q Consensus 126 ~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~ 205 (548)
+.+.++++|.++|+|.+....+..++++|.+|++++ |++++|..-.+..+|-.+||..+|.+.+..|++.+
T Consensus 158 ---sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e------r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aP 228 (464)
T KOG3764|consen 158 ---SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE------RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAP 228 (464)
T ss_pred ---hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh------hhHHHHHHHHHHhccceecCCcccchHhhcCCcCc
Confidence 678899999999999999999999999999999765 99999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcC
Q 008934 206 FGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 206 f~i~~~~~~i~~~~~~~~~ 224 (548)
|.+.+++.++-..+.++..
T Consensus 229 FlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 229 FLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHHHHhee
Confidence 9999988887665554443
No 94
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.70 E-value=7.4e-15 Score=157.76 Aligned_cols=364 Identities=11% Similarity=0.020 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----chHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVG-----RYRMIGFGCFTC 94 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~G-----rk~~~~~~~~~~ 94 (548)
..+....+.+.+. +.+...++.++++++|+|+++.+...+...+...+-++ +|.++||+ + ||+.+.++.++.
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHH
Confidence 3444477888888 88888899999999999999999999888888888655 99999996 7 777777776554
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
. ...+..++. .+ .......+.+++.+++.+....+.-++..|..+ +++ +.++..
T Consensus 106 ~-~~~~~~l~~-~~-------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~----~~~~~~ 159 (468)
T TIGR00788 106 S-AILYGLLPG-KV-------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP----SAGPSL 159 (468)
T ss_pred H-HHHHHhccc-cc-------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC----CcCCCe
Confidence 2 122222221 00 123344446788899999999999999999998 443 335667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceec-cCCCCCCc---------h------
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVK-SKANTSLL---------P------ 238 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~---------~------ 238 (548)
.++.+...++|.++|+.++|.+.+.++|+..|++.+...++..+..... ++.++ ..++.++. .
T Consensus 160 ~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~-~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (468)
T TIGR00788 160 VSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS-KERRAFVRPRIGTYLEMNMALLTLGVLANV 238 (468)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhc-ccccccccccccccchhhhhhhhhhHHHHH
Confidence 7777888899999999999999999999999999887766664333333 22210 11111000 0
Q ss_pred -hHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHH
Q 008934 239 -GLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELK 317 (548)
Q Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (548)
+..+.++..++++.. + ....+.++.+. .. .+. ...+...
T Consensus 239 ~~~~~~l~~~l~~~~i----------~----------~~l~fifl~~~-~~---------~~~-~~~~f~~--------- 278 (468)
T TIGR00788 239 KVQILGLRGAIQLLEI----------A----------KPLIFIFLSYA-NL---------PGA-SGSVFCA--------- 278 (468)
T ss_pred HHHHHHHHHHHhcHHH----------H----------HHHHHHHHHHh-hc---------CCC-CceeEEE---------
Confidence 000001111111000 0 00000111000 00 000 0000000
Q ss_pred HHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 008934 318 ALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVE 397 (548)
Q Consensus 318 ~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~ 397 (548)
....+| .++.....+..... +.+.....+.+|+.+| .+.++.+.++.++.+++........
T Consensus 279 -------~~~~lG----~s~~~~G~~~~~~~-----v~~i~g~~~~~~~~~~---~~~r~~l~~~~~l~~~~~~~~~~l~ 339 (468)
T TIGR00788 279 -------TTQCLP----GGPSFSGMSKVVGN-----LGSLCGVGGYDRFLKT---FPYRLLFGVTTLLYTLSSLFDLILV 339 (468)
T ss_pred -------EcccCC----CCcchhhhHHHHHH-----HHHHHHHHHHHHHHhh---CCHHHHHHHHHHHHHHHHhCceeee
Confidence 000111 33333332222211 1112233334444444 6777778888888887775533221
Q ss_pred HHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 398 AARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIM 477 (548)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~ 477 (548)
.. ....-++ .+.+++....++.+++.++.+.+.+.++.+.+|++.+|+..|+.+...++|..+++.+.
T Consensus 340 ~~---~~~~~gi---------~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 340 KR---WNLAFGI---------SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred ec---cccccCC---------CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000 12345566678889999999999999999999999999999999999999999999988
Q ss_pred HHhhhhh
Q 008934 478 NAVDDIT 484 (548)
Q Consensus 478 ~~i~~~~ 484 (548)
+.+....
T Consensus 408 g~l~~~~ 414 (468)
T TIGR00788 408 VLLMETI 414 (468)
T ss_pred HHHHHHc
Confidence 8877544
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.70 E-value=4.4e-14 Score=148.25 Aligned_cols=379 Identities=13% Similarity=-0.023 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHH--HHHHHHHHHHHHHHH-HHHhhccccchHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNI--IFIWTAATNFLPIVG-ALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i--~~~~~~~~~~~~~~~-G~laDr~~Grk~~~~~~~~~~~ 95 (548)
...+....+.+.+.+..+.+.+|.|++ +.|.|+++.|.. .....+...+.+|+. ++.+||+ ||||..++++.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 344555778888888888899999986 569999999997 355577776677666 6689995 99999766654322
Q ss_pred H-HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 96 L-GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 96 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
. ....+.... +. ......++....+.+...+...+...++..|..++ ++++.+
T Consensus 81 ~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~-------~~~~~~ 134 (390)
T TIGR02718 81 SACLASLALVG--PD-----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNG-------RTLAKG 134 (390)
T ss_pred HHHHHHHHcCC--cc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hhhhHH
Confidence 2 222222111 10 00122233333444455555555555565555544 335667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCC
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTK 254 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (548)
.+....+..+|..+|+...+++.++.||+.+|++.++..++..+..+...++.+++++ ++..+ .+.+...+|++...
T Consensus 135 ~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~l~~~~~~ 211 (390)
T TIGR02718 135 NAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPE--APLAR-RASLFRFFRRPLAW 211 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc--cchhh-HHHHHHHHcCcCHH
Confidence 7777777789999999888899999999999999888766655554443332211111 01000 01111112211100
Q ss_pred CCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCce
Q 008934 255 LPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFE 334 (548)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 334 (548)
..+.... +.................|. |
T Consensus 212 -------------------------~~~~~~~---------------------l~~~~~~~~~~~~~~~l~~~--G---- 239 (390)
T TIGR02718 212 -------------------------SLLALAL---------------------LSAMTAVSGFGLSKLYLVDA--G---- 239 (390)
T ss_pred -------------------------HHHHHHH---------------------HHHHHHHHHHHHhhHHHHhc--C----
Confidence 0000000 00000000111111111122 2
Q ss_pred ecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcc
Q 008934 335 IPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLR 414 (548)
Q Consensus 335 i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (548)
.+++...............+ .....+++.+| .+.++.+..+.++.++.......... .
T Consensus 240 ~s~~~ig~~~~~~~~~~~~~----g~~~~g~l~~r---~g~~~~l~~~~~~~~~~~~~~~~~~~--------~------- 297 (390)
T TIGR02718 240 WPLEWIGRLGMAGGAVTVLL----GCGGGAWLVRR---AGLWRTFILGVGLAGSLALLWFAQAA--------F------- 297 (390)
T ss_pred CCHHHHHHHHhHHHHHHHHH----HHHHHHHHHHH---hhHHHHHHHHHHHHHHHHHHHHHHHH--------c-------
Confidence 33333333322221111111 12233444444 55556666666655333322221110 0
Q ss_pred cccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Q 008934 415 AVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK-SMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWI 493 (548)
Q Consensus 415 ~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~ 493 (548)
....+.+.+....++.+++.+...+..+....+..++ +.+|+.+++.+...++|..+|+.+.|.+.+..+
T Consensus 298 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-------- 368 (390)
T TIGR02718 298 -WLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-------- 368 (390)
T ss_pred -ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 0001222333334455666777777777777777766 889999999999999999999999998775332
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHH
Q 008934 494 PSNINKGHYDYYYWLLTALSMANFLY 519 (548)
Q Consensus 494 ~~~~~~~~~~~~f~~~~~~~~v~~~~ 519 (548)
+...|+..+++.+++++.
T Consensus 369 --------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 369 --------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred --------cHHHHHHHHHHHHHHHHH
Confidence 456677766666665443
No 96
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.68 E-value=1.7e-14 Score=151.95 Aligned_cols=395 Identities=12% Similarity=0.052 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHH
Q 008934 56 TNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYF 135 (548)
Q Consensus 56 g~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (548)
..+++++.++.++++.++|+++||+ |||+.+.++.++..++..+..++...+ ....+++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~--------------------~~e~li~ 121 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAP--------------------SFEMLIL 121 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhh--------------------hHHHHHH
Confidence 3457889999999999999999996 999999999998888887777665211 5788999
Q ss_pred HHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHH--HhhhccCchhhhHHHHHHH
Q 008934 136 AFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIV--YIQDNLGWKVGFGVPAVIM 213 (548)
Q Consensus 136 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~--~l~~~~g~~~~f~i~~~~~ 213 (548)
+|++.|+..|......+.++.|..|++- ||........+..+|..++..++. .+.+...|++.+....+..
T Consensus 122 GR~i~Gl~~gl~~~~~pmyl~E~sP~~~-------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 122 GRLIVGLACGLSTGLVPMYLTEISPKNL-------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhcChhhh-------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHH
Confidence 9999999999999999999999999954 899888888888999888865542 2334556998888887766
Q ss_pred HHHHHHHHhcC--CceeccCCCCCCchhHHHHHHHHHhhccCCCCCcchh-hhhhcCCCCcccCCcchhhhHHhhhhhcC
Q 008934 214 LLSALSFFLAS--PFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQATE-EMYHHGKGSMRLMPSENLRFLNKACMAKH 290 (548)
Q Consensus 214 ~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 290 (548)
++.++...+.+ |++.-.+ ++...+..+.+ .-++.+.-.-.+ .++ ....+++... ......+.+.-. .
T Consensus 195 ~~~l~~l~~~PESPk~Ll~~--k~~~~~A~~sl-~~y~G~~~~~~~-~e~~~~e~~~~~~~---~~~~~sl~~~~~---~ 264 (485)
T KOG0569|consen 195 LLQLALLPFLPESPKYLLIK--KGDEEEARKAL-KFYRGKEDVEAE-IEEMLREIEEEELE---KKKQISLRQLLK---N 264 (485)
T ss_pred HHHHHHHhcCCCCcchHHHH--cCCHHHHHHHH-HHHhCCCcchhH-HHHHHHHHHHhccc---cccCCcHHHHhc---C
Confidence 65555444332 2221110 11111111111 111111000000 000 0000000000 000000000000 0
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHH-HhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCC
Q 008934 291 PEQDLTPDGRASNPNSLCTVEQVEELKALIK-ASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGK 369 (548)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~ 369 (548)
+.. ++.. .+...+-..+|......+.. ...+-...| ++.+.....|....++-.+ ...+...+.+|
T Consensus 265 ~~l---R~~~-~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG----~~~~~a~~an~~~g~v~~~-~t~~~~~lid~---- 331 (485)
T KOG0569|consen 265 PTL---RRPL-LIGIVVSFAQQFSGINAIFFYSTSIFKTAG----FTPEEAQYANLGIGIVNLL-STLVSPFLIDR---- 331 (485)
T ss_pred cch---hHHH-HHHHHHHHHHHhcCcceeHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh----
Confidence 000 0000 00000000111111111100 111111111 3333223333332222221 11112223444
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHH-hhhhhhhccc
Q 008934 370 PCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFN-MIGQTEFYYT 448 (548)
Q Consensus 370 ~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~-~~~~~~~~~~ 448 (548)
.+++..+.++..++.++.+++.......+... +.-.+..+.+.+++.+..++. .|..+-+..+
T Consensus 332 ---~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~-------------~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aE 395 (485)
T KOG0569|consen 332 ---LGRRPLLLISLSLMAVALLLMSIALFLSNSFG-------------SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAE 395 (485)
T ss_pred ---cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHH
Confidence 44557788888888888777766542211110 001112344555555555444 6666778888
Q ss_pred ccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008934 449 ELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYG 528 (548)
Q Consensus 449 ~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 528 (548)
..|++.|+.++++....+++++++-......+.+..+ ++.|..+.+..++..+..+...++++
T Consensus 396 Lf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----------------~~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 396 LFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----------------PYVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred hCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------chhhHHHHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999998888888775543 35677788888888887777888888
Q ss_pred ccCCCc
Q 008934 529 PFKGRV 534 (548)
Q Consensus 529 ~~~~~~ 534 (548)
+|+.++
T Consensus 459 gr~~~e 464 (485)
T KOG0569|consen 459 GRTPYE 464 (485)
T ss_pred CCCHHH
Confidence 776654
No 97
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.68 E-value=5.6e-15 Score=157.12 Aligned_cols=358 Identities=15% Similarity=0.120 Sum_probs=226.1
Q ss_pred HHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhh----ccccchHHHHH-HHHHHHHHHHHH
Q 008934 27 AFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLAD----SYVGRYRMIGF-GCFTCLLGMVLL 101 (548)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laD----r~~Grk~~~~~-~~~~~~~~~~l~ 101 (548)
+...+.+.....++..|+++.+|+++..+|.+..+..+...+..|+.|+++| |+ ||||.+++ |....+++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4455566666678999999999999999999999999999999999999999 75 98877664 666777777776
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVF 181 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 181 (548)
.... |. +.........+.+..++..++......+..++..|..+++++ |.+..++....
T Consensus 90 f~~~--p~-------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~------R~~l~~~~~~~ 148 (428)
T PF13347_consen 90 FSPP--PA-------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE------RTRLSSWRMIF 148 (428)
T ss_pred hccc--cc-------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh------hhhHHHHHHHH
Confidence 6431 11 000011344556777777999999999999999999987543 89999998888
Q ss_pred HHHHHHHHHHHHHHhhhcc-------CchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCC
Q 008934 182 VSASSIVAVTCIVYIQDNL-------GWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTK 254 (548)
Q Consensus 182 ~~ig~~~gp~i~~~l~~~~-------g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (548)
..+|..+...+.+.+.+.. +|++...+.+++.++..++.....|+..++++++++..+..+.+...+++|.+.
T Consensus 149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFR 228 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHH
Confidence 8888876665655554322 577777777776666666555554441111112122112222222222222111
Q ss_pred CCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCce
Q 008934 255 LPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFE 334 (548)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 334 (548)
.. .....+... .+.. ..... .......++.. +
T Consensus 229 ~l--------------------~~~~~~~~~------------------~~~~-----~~~~~----~y~~~~vl~~~-~ 260 (428)
T PF13347_consen 229 IL--------------------LLAFFLQWL------------------AFAL-----MNTFL----PYYFTYVLGNE-G 260 (428)
T ss_pred HH--------------------HHHHHHHHh------------------hhhh-----hhhHH----HHHHHHHhcCc-h
Confidence 00 000000000 0000 00000 00111111100 0
Q ss_pred ecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcc
Q 008934 335 IPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLR 414 (548)
Q Consensus 335 i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (548)
. .+.+.....+..++ ..|++.++.+| .+.++.+..+.++.+++.+.+.+..
T Consensus 261 ~-~~~~~~~~~~~~~v--------~~~~~~~l~~r---~gk~~~~~~~~~~~~~~~~~~~~~~----------------- 311 (428)
T PF13347_consen 261 L-ISIFMLIFFVASIV--------GSPLWGRLSKR---FGKKKVYIIGLLLAALGFLLLFFLG----------------- 311 (428)
T ss_pred h-hHHHHHHHHHHHHH--------HHHHHHHHHHH---ccceeehhhhHHHHHHHHHHHHHHH-----------------
Confidence 0 01111122222222 44445555555 5666778889999888888877664
Q ss_pred cccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 008934 415 AVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK-------SMSSIASTLSGAGLSAANLVASLIMNAVDDITKR 486 (548)
Q Consensus 415 ~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~ 486 (548)
..+.+++.+..++.|++.+..++....+..+..+. +..|...|++++...++..+++.+.+.+....+.
T Consensus 312 ---~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 312 ---PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred ---hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 12678889999999999999999999999888874 4579999999999999999999999987765543
No 98
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=4.6e-15 Score=147.65 Aligned_cols=335 Identities=14% Similarity=0.050 Sum_probs=198.4
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCcc
Q 008934 49 NMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWS 128 (548)
Q Consensus 49 g~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (548)
+-+..-+|.+-+.|.+...+.++.+|.++||+ |||.++.+|.+..++...+.+.+.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~----------------------- 119 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR----------------------- 119 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence 34557789999999999999999999999997 999999999998888888888766
Q ss_pred chHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccCchhh
Q 008934 129 QLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQD---NLGWKVG 205 (548)
Q Consensus 129 ~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~---~~g~~~~ 205 (548)
++..+..+|++.|+..|- .....++++|.+++++ |+.+++.......+|.++||+++|++.+ ..| .++
T Consensus 120 ~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~sek~-------r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p 190 (451)
T KOG2615|consen 120 NFAAFVLARFLGGIFKGN-LSVIRAIISDVVSEKY-------RPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYP 190 (451)
T ss_pred HHHHHHHHHHhhhhccCc-hHHHHHHHHhhcChhh-------ccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCc
Confidence 676777889999999887 4778899999999954 8999999999999999999999999987 333 233
Q ss_pred hHHHHH-HHHHHH---HHHHhcCCce-eccCCC--CCCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcch
Q 008934 206 FGVPAV-IMLLSA---LSFFLASPFY-VKSKAN--TSLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSEN 278 (548)
Q Consensus 206 f~i~~~-~~~i~~---~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (548)
|..+.. ..+++. ..+..+.|+. +.++.. .++..+....-....+- + +.+....
T Consensus 191 ~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~~~~~~~~--------~--~~~~v~~---------- 250 (451)
T KOG2615|consen 191 FALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTLQEAADDRLALLKF--------A--RIFKVAA---------- 250 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccchhhhhhhhhhhcch--------h--hhhhhhh----------
Confidence 333222 222222 2223333332 211111 11111111100000000 0 0000000
Q ss_pred hhhHHhhhhhcCCCCCCCCCCCCCCCCccchHH--HHHHHHHHHHHhhccCCC-CCCceecCcccchhhHHHHHHHHHHH
Q 008934 279 LRFLNKACMAKHPEQDLTPDGRASNPNSLCTVE--QVEELKALIKASSMDRHV-TPNFEIPSGSFNIFAILTLTIWIGLY 355 (548)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l-g~~~~i~~~~~~~~~~~~ii~~~~l~ 355 (548)
+..- +.......|..+..+ ...++... ....+..+ -++|+..+.....+...+.+...++
T Consensus 251 --------lrn~------p~~~~i~~~~i~~l~~~ly~~l~s~--~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~- 313 (451)
T KOG2615|consen 251 --------LRNP------PLLDFISVLRIFGLHYFLYLELFSG--LENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVI- 313 (451)
T ss_pred --------hcCc------cccchHHHHHHHHHHHHHHHHHHHH--HHhhHHHhhcCccCCChhhheeeeehhhHHHHHH-
Confidence 0000 000000000000000 00001111 00111111 0145566655555555444444443
Q ss_pred HHHHHhhhhhhcCCCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHH
Q 008934 356 DRAVLPLASKIKGKPCQLS-LKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLA 434 (548)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~-~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g 434 (548)
+...+|..++. ++ .+.....++.++.=.++..+... ....+..+..+.++.
T Consensus 314 ql~~~~~l~~~------~~~~~a~l~~~l~~~vP~~llls~~~----------------------~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 314 QLALVPILPRY------KGNIKAVLLFSLLLIVPAFLLLSLAR----------------------TPVVLYLGSTLKSFS 365 (451)
T ss_pred HHhcccccccc------ccchhhHHHHHHHHHHHHHHHHhccc----------------------cchhhhHHHHHHHHH
Confidence 22234433332 11 22222333333322223322221 334566788889999
Q ss_pred HHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 435 MAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVD 481 (548)
Q Consensus 435 ~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~ 481 (548)
.+...+..+.++....|.++||+.+|+.....+++.++||++.|.+.
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 99999999999999999999999999999999999999999998865
No 99
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.67 E-value=1.9e-13 Score=147.59 Aligned_cols=149 Identities=11% Similarity=0.109 Sum_probs=117.5
Q ss_pred HHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccc
Q 008934 39 NMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQL 118 (548)
Q Consensus 39 ~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 118 (548)
....++.+++|-++ +..|+.+.+.+...+..++.|+|+|.+ |||..++.+.++.++|++..+.++
T Consensus 65 ~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------- 129 (599)
T PF06609_consen 65 SILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------- 129 (599)
T ss_pred HHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC-------------
Confidence 34468889999874 467888999999999999999999996 999999999999999999999776
Q ss_pred cCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 119 RNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQD 198 (548)
Q Consensus 119 ~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~ 198 (548)
+...++.+..+.|+|.|... .....++|..|.+ .|..+..+.....-+....+|.++..+..
T Consensus 130 ----------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k-------~R~~~~~~~~~~~i~~~~~~~~ia~~~~~ 191 (599)
T PF06609_consen 130 ----------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNK-------WRGLGLAIASIPFIITTWISPLIAQLFAA 191 (599)
T ss_pred ----------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccc-------hhhhHhHHHHHHHHhhhcccHHHHHHhcc
Confidence 67779999999999987765 4556689999873 36666665554444445566777766666
Q ss_pred ccCchhhhHHHHHHHHHHHHHH
Q 008934 199 NLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 199 ~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
+.+|||.|++..+...++++..
T Consensus 192 ~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 192 HSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred CCCcchHHHHHHHHHHHHHHHH
Confidence 6799999999888666655443
No 100
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=1e-13 Score=148.66 Aligned_cols=180 Identities=16% Similarity=0.229 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhc---cccchHHHHH-HHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADS---YVGRYRMIGF-GCFTCLLGMV 99 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr---~~Grk~~~~~-~~~~~~~~~~ 99 (548)
...+..++.+..+..++..|+++.+|+++..+|.+..+.-+.-.+.-|+.|+++|| ++||||..++ +.+.+.++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 35556677777778899999999999999999999999999999999999999997 2599887765 4456666666
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY 179 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 179 (548)
++...+ .. ..+.....+.+...+..+++........++.++..++.+ +|.+..++..
T Consensus 96 llf~~p---~~--------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~------eRt~l~s~r~ 152 (460)
T PRK11462 96 LAYSTP---DL--------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT------QRISLQSWRF 152 (460)
T ss_pred HHHhCC---CC--------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH------HHHHHHHHHH
Confidence 665322 10 001124556666777788898888889999999988754 4999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-------CchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 180 VFVSASSIVAVTCIVYIQDNL-------GWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 180 ~~~~ig~~~gp~i~~~l~~~~-------g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
.+.++|..+++.+...+.+.. ||+....+.+++.++...+.+...++
T Consensus 153 ~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 153 VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 999999888877655444332 46665555555554444444443333
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.66 E-value=8.7e-15 Score=162.34 Aligned_cols=199 Identities=15% Similarity=0.242 Sum_probs=151.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
+|.+.+.+....+......+.......-++++++++.++.|++.+.+.++..++.++.|+++||+ ||||.+.++.+++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 55555555555555556667777777888999999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCC----------------CCcccc-cC---------CCcCCC--ccchHHHHHHHHHHHHhcccc
Q 008934 96 LGMVLLWSTTILPGAKP----------------PACDQL-RN---------GCESAT--WSQLMPLYFAFGLMSLGSGGI 147 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~----------------~~~~~~-~~---------~~~~~~--~~~~~~~~i~~~l~g~g~g~~ 147 (548)
++.++.++.+++..-+. ..|... .+ .|.... ...+..++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 99999886543211000 011100 00 011111 113567788999999999999
Q ss_pred ccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----------------------Cchhh
Q 008934 148 RSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL----------------------GWKVG 205 (548)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~----------------------g~~~~ 205 (548)
.+...+++.|.+|+++ |+.++++++....+|.++|+.+++++.+.+ +|+..
T Consensus 190 ~~~~~~~i~d~~~~~~-------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN-------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred hhcCchhhhccCCccc-------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 9999999999999854 899999999999999999999999987643 27778
Q ss_pred hHHHHHHHHHHHHHHHh
Q 008934 206 FGVPAVIMLLSALSFFL 222 (548)
Q Consensus 206 f~i~~~~~~i~~~~~~~ 222 (548)
|++.+++.++..+.++.
T Consensus 263 Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 263 FLICGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88887766665544443
No 102
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.64 E-value=1.1e-12 Score=132.36 Aligned_cols=146 Identities=13% Similarity=0.101 Sum_probs=123.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHh
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWST 104 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~ 104 (548)
..|+..--....+-.+.+.+++.++++..|++.+...+..++.+++++.|++.+|+ |+|+.+.+|+.++++|..++.=+
T Consensus 20 ~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 20 SLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred HHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhh
Confidence 33333333445566777788999999999999999999999999999999999996 99999999999999998888633
Q ss_pred cccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHH
Q 008934 105 TILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSA 184 (548)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 184 (548)
+ +...+..++.+.++.+.|.+...++.+++++...|+++ -.+-++..+....+
T Consensus 99 a--------------------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~-------a~~rlnl~q~fn~l 151 (422)
T COG0738 99 A--------------------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES-------AAFRLNLAQAFNGL 151 (422)
T ss_pred h--------------------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh-------HHHHHHHHHHhhhh
Confidence 3 12367889999999999999999999999999999854 45667788888999
Q ss_pred HHHHHHHHHHHhhh
Q 008934 185 SSIVAVTCIVYIQD 198 (548)
Q Consensus 185 g~~~gp~i~~~l~~ 198 (548)
|+++||.+++++..
T Consensus 152 Ga~~gp~~g~~lil 165 (422)
T COG0738 152 GAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998876
No 103
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=7.7e-13 Score=144.03 Aligned_cols=153 Identities=18% Similarity=0.266 Sum_probs=126.4
Q ss_pred hhHHHHHHHHhHh-----hcCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhccc
Q 008934 35 GFTPNMILYLCRE-----YNMET--TAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTIL 107 (548)
Q Consensus 35 ~~~~~l~~yl~~~-----lg~s~--~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~ 107 (548)
+....+..++++. ...+. .+.+++.++..++..++.+++|+++|++ |||++++++.+++.+|.++...+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 5555566665552 22222 3458999999999999999999999996 999999999999999999999987
Q ss_pred CCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHH
Q 008934 108 PGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSI 187 (548)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 187 (548)
+...++++|++.|+|.|+.....+.+++|..|++ .|+...+.++...++|..
T Consensus 141 ---------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~-------~RG~l~~~~~l~~~~Gi~ 192 (513)
T KOG0254|consen 141 ---------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAH-------IRGTLVSLYQLFITIGIL 192 (513)
T ss_pred ---------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChh-------hhHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999984 499999999999999999
Q ss_pred HHHHHHHHhhhc--cCchhhhHHHHHHHHHHHHH
Q 008934 188 VAVTCIVYIQDN--LGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 188 ~gp~i~~~l~~~--~g~~~~f~i~~~~~~i~~~~ 219 (548)
++.. .+...++ ++||..+.+..+..++..+.
T Consensus 193 ~~~~-~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 193 LGYC-INYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HHHH-HhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 9854 4444443 48998888877766655555
No 104
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=8.4e-14 Score=149.78 Aligned_cols=413 Identities=15% Similarity=0.098 Sum_probs=254.4
Q ss_pred HHHHHHHHHHHHHHHhhHHH---HHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPN---MILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~---l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+.+..++-++..+++..- +-..++++++-+..+++|+.++......+..|+.+.+.||+ |.|.+.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 55555666666666666543 34556889999999999999999999999999999999997 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHH-HHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFG-LMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
|.++.++++ +.+.+++... +.|+|.|+.+.....++...|++ +|+.+.
T Consensus 124 g~~lssF~~-----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k--------kR~lA~ 172 (509)
T KOG2504|consen 124 GLLLSSFAT-----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK--------KRALAT 172 (509)
T ss_pred HHHHHHHHh-----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH--------HHHHHH
Confidence 999999987 6777777654 56899999999999999988874 489999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCC-CCCchhHHHHHHHHHhhccCC
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKAN-TSLLPGLTQVLVASFKNRRTK 254 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 254 (548)
++...+..+|..+-|.+..++.+.+|||..+++.+.+.+-........+|.....++. .+.........-..-+..+..
T Consensus 173 Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (509)
T KOG2504|consen 173 GIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELR 252 (509)
T ss_pred hhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccc
Confidence 9988888999999999999999999999999998877765555555544421111110 000000000000000000000
Q ss_pred CCCc---c------hhhhhhc-CCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchH---HHHHHHH-HHH
Q 008934 255 LPTQ---A------TEEMYHH-GKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTV---EQVEELK-ALI 320 (548)
Q Consensus 255 ~~~~---~------~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~ 320 (548)
...+ . .+...+. +...+.......+..+|..... + ..++.++.. ..+.... .++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~---------~---~~fl~~~~~~~~~~~g~~~p~~~ 320 (509)
T KOG2504|consen 253 ISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLK---------D---PKFLLLALSNLFAYLGFNVPFVY 320 (509)
T ss_pred cccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHc---------C---chHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0000000 0000000000000001111100 0 011100000 0000000 000
Q ss_pred HHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 321 KASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAAR 400 (548)
Q Consensus 321 ~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~ 400 (548)
-....+ ..+ ++........+ .+...+.+.-+..+.+.+++. .+......++++..+++.++..+..
T Consensus 321 l~~~~~-~~g----~~~~~aa~l~S-----iigi~~i~gRi~~G~laD~~~-~~~~~~~~~~ll~~gl~~~~~p~~~--- 386 (509)
T KOG2504|consen 321 LPSYAK-SLG----LSSNDAAFLLS-----IIGVSDIIGRIILGLLADKPG-IRALVLFLLTLLIAGLARLFLPFAT--- 386 (509)
T ss_pred HHHHHh-hcC----CChhhhHHHHH-----HHHHhhhhhhhhhhhhcCccc-cchHHHHHHHHHHHHHHHHHHHHhc---
Confidence 011111 111 22211111111 111122222333444445531 2344556778888888887777665
Q ss_pred HHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008934 401 RSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAV 480 (548)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i 480 (548)
+++.++..-+++|+..+...........+..+.+.-..+.|+..+..+++..+||-+.+.+
T Consensus 387 -------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 387 -------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred -------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceee
Confidence 7788888889999999999888888899999999999999999999999999999998865
Q ss_pred hhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhh
Q 008934 481 DDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACC 524 (548)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 524 (548)
.+.+ ++|...|...++..+++..++.+..
T Consensus 448 ~d~t---------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 448 YDIT---------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eecc---------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 5433 3477888898888888887766665
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.61 E-value=3.6e-13 Score=139.39 Aligned_cols=387 Identities=10% Similarity=0.018 Sum_probs=216.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+..+......+...+++-...++.+.+|+++.|+|.+++|.+.++..+...+.+|+.|.++||. |.||-++..+.+..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 5677777777788888888999999999999999999999999999999999999999999995 977765544433222
Q ss_pred --HHHHHH-HhcccCCCCCCCcccccCCCcCCCccch-HHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 97 --GMVLLW-STTILPGAKPPACDQLRNGCESATWSQL-MPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 97 --~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+-.... ..+ +.+ .|. ...+++-...++......|..-+++.+.-- +.+
T Consensus 86 l~~pff~~v~~p-ll~------------------~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr---------~~~ 137 (412)
T PF01306_consen 86 LFGPFFIYVFGP-LLQ------------------SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR---------RNG 137 (412)
T ss_dssp TCHHHHHHTHHH-HHH------------------TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH---------HHS
T ss_pred HHHHHHHHHHHH-HHH------------------HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH---------Hhc
Confidence 222221 111 000 011 111222122233333333333333222111 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC----CCchh-HHHHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANT----SLLPG-LTQVLVAS 247 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~ 247 (548)
.=+|-....+++|.+++..++|.+.+ .+-+..|++.....++..++.+..++...++.+.. .+.++ ..+.+...
T Consensus 138 feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 216 (412)
T PF01306_consen 138 FEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSL 216 (412)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHH
T ss_pred CCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHH
Confidence 22333344578999999999999987 45677888776655555544444433222111110 01011 01111122
Q ss_pred HhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccC
Q 008934 248 FKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDR 327 (548)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (548)
+|.++ .|.....+.... ......+||..+-... ..+
T Consensus 217 ~k~~~---------------------------fw~~~l~v~g~~------------~~Y~vfdqqf~~y~~~----~f~- 252 (412)
T PF01306_consen 217 FKMRN---------------------------FWFFVLFVIGVA------------AIYDVFDQQFPIYFAS----FFQ- 252 (412)
T ss_dssp TTSHH---------------------------HHHHHHHHHHHH------------HHHHHHHHHHHHHHHH----TSS-
T ss_pred hcchh---------------------------HHHHHHHHHHHH------------HHHHHHHHHHHHHHHH----Hhc-
Confidence 22111 011000000000 0000002222211110 000
Q ss_pred CCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 328 HVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINE 407 (548)
Q Consensus 328 ~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~ 407 (548)
+-+.....+...+++.+++ +..+....+++.+| .+++..+.++.+++++-....++.+
T Consensus 253 ----~~~~g~~~~G~l~s~~v~~-----E~~~m~~~p~li~r---ig~k~~Lllag~i~~iRi~~~~~~~---------- 310 (412)
T PF01306_consen 253 ----SAGQGNQMYGYLWSVQVFL-----EALMMFFSPWLINR---IGAKNLLLLAGVIMAIRIIGSGFAT---------- 310 (412)
T ss_dssp ----SHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH---H-HHHHHHHHHHHHHHHHHHHHT------------
T ss_pred ----ccccChhHHhHHHHHHHHH-----HHHHHHHHHHHHHh---cChHhHHHHHHHHHHHHHHHHhhhc----------
Confidence 0111222333444433333 22233333444444 6778888888889999988888776
Q ss_pred CCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcC
Q 008934 408 GISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLS-GAGLSAANLVASLIMNAVDDITKR 486 (548)
Q Consensus 408 ~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~~g~~lg~~~~~~i~~~~~~ 486 (548)
+.+++++.-.+.++-..+......-++.+..|++..++...+. ++..++|..+.+.+.|.+.+..+
T Consensus 311 ------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G- 377 (412)
T PF01306_consen 311 ------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG- 377 (412)
T ss_dssp ------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-
Confidence 7888999999999999999999999999999999999988885 78899999999999988664332
Q ss_pred CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 487 GGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
++..|++++.+.++..++..+.-++.
T Consensus 378 ---------------~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 378 ---------------FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred ---------------cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 45578888877776666555544433
No 106
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=3.2e-12 Score=133.67 Aligned_cols=361 Identities=16% Similarity=0.104 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchHHHHH-HHHHHHHHH
Q 008934 23 IANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY---VGRYRMIGF-GCFTCLLGM 98 (548)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~~~~-~~~~~~~~~ 98 (548)
-...+..++.+-.+..++..|+++..|+|+..+|.+..+.-+.-++.-|+.|.+.||. +||+|..++ +.+-+++..
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~ 97 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVA 97 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHH
Confidence 3355666777777888999999999999999999999999999999999999999974 588776665 446677777
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.++..++. ...+.+....++...+.++++........++.++..++.+ +|.+..++.
T Consensus 98 ~l~F~~p~-----------------~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~------ER~~l~s~R 154 (467)
T COG2211 98 VLLFITPD-----------------FSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ------ERASLTSWR 154 (467)
T ss_pred HHHHcCCC-----------------cccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH------HHHHHHHHH
Confidence 77766541 0112356667777889999999999999999999988764 499999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh-------ccCchhhhHHHHHHHHHHHHHHHhcCCceec-cCCCCC-CchhHHHHHHHHHh
Q 008934 179 YVFVSASSIVAVTCIVYIQD-------NLGWKVGFGVPAVIMLLSALSFFLASPFYVK-SKANTS-LLPGLTQVLVASFK 249 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~-------~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 249 (548)
....++|..+...+.+.+.. ..||+..-.+.+++..++.++++...+++.. .++.++ ...+..+.+...++
T Consensus 155 ~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~ 234 (467)
T COG2211 155 MVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFK 234 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHc
Confidence 99999887666555544432 2467776666666666666666665554433 222222 33333444444455
Q ss_pred hccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCC
Q 008934 250 NRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHV 329 (548)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 329 (548)
||.+..- ...++... +..+ .+.-.........+
T Consensus 235 Nrp~~~~---------------------l~~~l~~~----------------------~~~~----i~~s~~~yy~~y~l 267 (467)
T COG2211 235 NRPLLLL---------------------LLMNLLLF----------------------IAFN----IRGSIMVYYVTYVL 267 (467)
T ss_pred cchHHHH---------------------HHHHHHHH----------------------HHHH----HHhhhhheeEEEEc
Confidence 5433220 00000000 0000 01000011112222
Q ss_pred CCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 008934 330 TPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGI 409 (548)
Q Consensus 330 g~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~ 409 (548)
+ ......-..........+. ..+++.++.+| ++.++.+.+|.++..++...+.+..
T Consensus 268 g------~~~l~~~~~~~~~~~~~l~---~~~~~p~L~~~---~gkk~~~~~~~~~~~i~~~~~~f~~------------ 323 (467)
T COG2211 268 G------DPELFAYLLLLASGAGLLI---GLILWPRLVKK---FGKKKLFLIGLLLLAVGYLLLYFTP------------ 323 (467)
T ss_pred C------ChHHHHHHHHHHHHHHHHH---HHHhHHHHHHH---hchHHHHHHHHHHHHHHHHHHHhhc------------
Confidence 2 1111111111111111111 12233344444 5666888899999888888887753
Q ss_pred CCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc-------hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 410 SDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK-------SMSSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 410 ~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
.-+.+++++..++.++|.+..++..++++.+.++. +..|...|...+.+=+|.+++..+.+.+..
T Consensus 324 --------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 324 --------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred --------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12566677777899999999999999998877654 456889999999999999999999998776
Q ss_pred hhc
Q 008934 483 ITK 485 (548)
Q Consensus 483 ~~~ 485 (548)
..+
T Consensus 396 ~~G 398 (467)
T COG2211 396 AIG 398 (467)
T ss_pred HcC
Confidence 554
No 107
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.57 E-value=3.6e-12 Score=139.09 Aligned_cols=141 Identities=12% Similarity=0.029 Sum_probs=126.2
Q ss_pred hHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcC
Q 008934 45 CREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCES 124 (548)
Q Consensus 45 ~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 124 (548)
.+..+.+.....+..+++.++..+++++.|+++||+ |||++++.++++.+++.++.+++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~------------------- 169 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAP------------------- 169 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhC-------------------
Confidence 456778888999999999999999999999999995 999999999999999998888877
Q ss_pred CCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchh
Q 008934 125 ATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKV 204 (548)
Q Consensus 125 ~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~ 204 (548)
+.+.+++.|++.|++.++...+...+++|.+++++ |+.+.++ ......++.++|..++++.. +||+
T Consensus 170 ----~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~-------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~ 235 (521)
T KOG0255|consen 170 ----NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ-------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRW 235 (521)
T ss_pred ----cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch-------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHH
Confidence 88999999999999999999999999999999954 8999999 88888888999999999887 8999
Q ss_pred hhHHHHHHHHHHHHH
Q 008934 205 GFGVPAVIMLLSALS 219 (548)
Q Consensus 205 ~f~i~~~~~~i~~~~ 219 (548)
.+++..+..++.++.
T Consensus 236 ~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 236 LFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999877766655444
No 108
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.54 E-value=5.9e-11 Score=127.06 Aligned_cols=388 Identities=16% Similarity=0.074 Sum_probs=218.9
Q ss_pred HHHhhHHHHHHHHhHhhc----------------------------CCh-hHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 008934 32 ATVGFTPNMILYLCREYN----------------------------MET-TAATNIIFIWTAATNFLPIVGALLADSYVG 82 (548)
Q Consensus 32 ~~~~~~~~l~~yl~~~lg----------------------------~s~-~~ag~i~~~~~~~~~~~~~~~G~laDr~~G 82 (548)
+...+..+.|.|+++... .+. +-.+...++..+...+..|+-|-++|+. |
T Consensus 20 ~~~i~t~~~p~~~~~~a~~~g~~~~~~~~~c~~~~~~c~~~~~g~~~~~~s~~~~~~sis~l~~all~P~lGa~aD~~-~ 98 (477)
T PF11700_consen 20 ATVIVTFFFPPYFQSLAREAGVLPGDPTQPCSDSDDDCVVPFFGSWIDTSSLWLYANSISGLLQALLAPFLGAIADYG-G 98 (477)
T ss_pred hhhhHHHHHHHHHHHHHHhcccccccccCcccccCCccccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHccc-c
Confidence 445567788999887641 111 2235678888999999999999999996 8
Q ss_pred chHHHHHHHH-HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCC
Q 008934 83 RYRMIGFGCF-TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDK 161 (548)
Q Consensus 83 rk~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~ 161 (548)
+||.++.... +..+...++.+.. ..+.+...+..++..++.+......++++.|..++
T Consensus 99 ~Rk~~l~~~~~~~~~~~~~l~~v~---------------------~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~ 157 (477)
T PF11700_consen 99 RRKRFLLIFTLLGVLATALLWFVS---------------------PGQWWLALVLFIIANVGYEASNVFYNAYLPDLARP 157 (477)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhC---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCC
Confidence 8777666554 4444555555432 12445555555566688888889999999999988
Q ss_pred CCCCcc-------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------cCchhhhHHHHHHHH
Q 008934 162 GDGTKS-------------------KGALQSYFSWYYVFVSASSIVAVTCIVYIQDN--------LGWKVGFGVPAVIML 214 (548)
Q Consensus 162 ~~~~~~-------------------~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~--------~g~~~~f~i~~~~~~ 214 (548)
++..+. ..+|++..+.-+..+++|+++...+.-.+... .+.|..+.+.++-.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~ 237 (477)
T PF11700_consen 158 EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWL 237 (477)
T ss_pred ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHH
Confidence 764100 01127888888888888888877665444322 224666776666544
Q ss_pred HHHHHHHhcCCceec--cCCCC-CCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCC
Q 008934 215 LSALSFFLASPFYVK--SKANT-SLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHP 291 (548)
Q Consensus 215 i~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (548)
+..+-.++..|+.++ ..+.. +....-.+-++..+|+.+. .+ ....++-
T Consensus 238 vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~-~~--------------------~~~~fLi-------- 288 (477)
T PF11700_consen 238 VFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRK-LR--------------------QLFLFLI-------- 288 (477)
T ss_pred HHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHh-Ch--------------------HHHHHHH--------
Confidence 444433444333322 11111 1122223333333333211 10 1111110
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008934 292 EQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPC 371 (548)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~ 371 (548)
-|.++ .+-+..+..+.. ......++ ++... .+...+...+....-..+..++.+|
T Consensus 289 ------------a~~l~-~dg~~ti~~~~~-i~a~~~lg----~s~~~-----l~~~~l~~~i~a~~Ga~~~g~l~~r-- 343 (477)
T PF11700_consen 289 ------------AYFLY-SDGVNTIISFAG-IYATEVLG----MSTTQ-----LIVFGLVVQIVAIIGALLFGWLQDR-- 343 (477)
T ss_pred ------------HHHHH-HHHHHHHHHHHH-HHHHHhcC----cCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 01111 112222221100 01111121 22222 2222222233222233344444444
Q ss_pred CCCch--HHHHHHHHHHHHHHHHHHH--HHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 008934 372 QLSLK--LRMGIGLLFSTASMTAWAI--VEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYY 447 (548)
Q Consensus 372 ~~~~~--~~~~iG~~l~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~ 447 (548)
++++ +.+.+++++..+..+...+ .. + .-| ..+.|.+.+..++.|+..+-..+..-++..
T Consensus 344 -~g~k~~~~l~~~l~~~~~i~~~g~~G~~~----~---~~g---------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~ 406 (477)
T PF11700_consen 344 -FGPKTKRTLLISLILWIIIPLYGLFGFWP----S---FFG---------LKSPWEFWVLAVLIGLFMGGIQSASRSLFS 406 (477)
T ss_pred -hCCchhHHHHHHHHHHHHHHHHHHHHhhh----c---ccC---------cccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 5544 4444444444222222211 11 0 000 114455666667899999999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 448 TELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 448 ~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
+..|+++++...|++.+..-..+.+||++.+.+.+.++ +..+.+..+.++.++++++.+....++
T Consensus 407 ~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 407 RLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchh
Confidence 99999999999999999999999999999999887663 234557777888888877775554333
No 109
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.54 E-value=2.9e-11 Score=123.39 Aligned_cols=376 Identities=15% Similarity=0.120 Sum_probs=223.4
Q ss_pred HhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----ch-HHHHHHHHHHHHHHHHHHHhcccCCCCCCCccc
Q 008934 44 LCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVG-----RY-RMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQ 117 (548)
Q Consensus 44 l~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~G-----rk-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 117 (548)
+..|++++..-.+..+....+... ..+..|+.||+. + || .-+..|..++..+..+.+.+..... .+.++
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~---~~~~~ 80 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA---ESGQQ 80 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc---ccccc
Confidence 456899999999988888877766 589999999996 6 55 4455566677777666665442111 00000
Q ss_pred ccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 118 LRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ 197 (548)
Q Consensus 118 ~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~ 197 (548)
.............++..+.|+|.+....+..++++|..||++ |.++.++.+.+.-+|.+++..+.+.+.
T Consensus 81 ----~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~-------R~~~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 81 ----SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER-------RPRVVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred ----cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh-------hhhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 011111122345556777899999999999999999999955 899999999999999999999999888
Q ss_pred hccCchhhhHHH----HHHHHHHHHHHHhcCCceeccC-CCCCCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcc
Q 008934 198 DNLGWKVGFGVP----AVIMLLSALSFFLASPFYVKSK-ANTSLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMR 272 (548)
Q Consensus 198 ~~~g~~~~f~i~----~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (548)
+.++..-..-+. .+..++.++..+-..++.++.+ ..+++.............++.. .
T Consensus 150 ~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a-------~----------- 211 (403)
T PF03209_consen 150 DPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQA-------R----------- 211 (403)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCCh-------h-----------
Confidence 877643222222 1222222223233333332222 1112222222111111111100 0
Q ss_pred cCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcc---cchhhHHHHH
Q 008934 273 LMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGS---FNIFAILTLT 349 (548)
Q Consensus 273 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~---~~~~~~~~ii 349 (548)
..+.++......+. .+ .--++-+-|.-|+++.+. ++.+.....+
T Consensus 212 ----~f~~fl~l~t~a~~-------------------------~Q----D~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L 258 (403)
T PF03209_consen 212 ----RFFVFLFLGTLAFF-------------------------MQ----DVILEPYGGEVFGMSVGETTRLTAFWGGGTL 258 (403)
T ss_pred ----HHHHHHHHHHHHHH-------------------------hh----HHHcCCchhHHcCCCHHHHHHHHHHHHHHHH
Confidence 00011111100000 00 111111111124455533 3333344444
Q ss_pred HHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHH
Q 008934 350 IWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLV 429 (548)
Q Consensus 350 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~ 429 (548)
+...+.... ..+ + .++++...+|....++++....... ..-+.|.+.+..+
T Consensus 259 ~G~~~~g~~----l~~---~---~~~~~~a~~G~~~~~~~f~lii~a~-------------------~~~~~~~~~~~~~ 309 (403)
T PF03209_consen 259 LGMLLAGFL----LSR---R---LGKKRTAALGCLLGALAFALIILAG-------------------PLGSPWLFRPGVF 309 (403)
T ss_pred HHHHHHHHH----hcC---C---CCchHHHHHHHHHHHHHHHHHHHHH-------------------hcccchHHHHHHH
Confidence 444443322 221 2 4445556677777777776655443 1125778899999
Q ss_pred HHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHH
Q 008934 430 LSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLL 509 (548)
Q Consensus 430 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 509 (548)
++|+|.++......+...+.+++++.|+.+|.|...+.++..+|.++.+.+.+... ++..+.....|..+|.+=
T Consensus 310 l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~------~~~~~~~~~aY~~VF~lE 383 (403)
T PF03209_consen 310 LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR------ALFGNSPALAYGVVFALE 383 (403)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HhccCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998776653 121111223567777776
Q ss_pred HHHHHHHHHHHH
Q 008934 510 TALSMANFLYYL 521 (548)
Q Consensus 510 ~~~~~v~~~~~~ 521 (548)
++..++++++..
T Consensus 384 a~ll~~a~~ll~ 395 (403)
T PF03209_consen 384 AVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHH
Confidence 666666655443
No 110
>PTZ00207 hypothetical protein; Provisional
Probab=99.50 E-value=1.7e-10 Score=125.56 Aligned_cols=174 Identities=13% Similarity=0.068 Sum_probs=126.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
++|......+.++.+... .|++. .....+++++|+|..+.+++.++.. ......+++|+++||+ |||+++.++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~-~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSF-MYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 334433333334443333 34444 3444679999999999999987744 3445677899999996 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
+.++.++++++..- . . ..+.+.+.+.|++.|+|.+...+.....+.+++|+ +|+.
T Consensus 101 ~~iG~ll~ala~~~-~-i---------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~--------~RG~ 155 (591)
T PTZ00207 101 FCLGTLLFALTFQE-V-I---------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPS--------NRGA 155 (591)
T ss_pred HHHHHHHHHHHhcc-c-c---------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh--------hhHH
Confidence 99999999886310 0 0 12678899999999999998888888889999973 2899
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhhhccCchhhhHHHHHHHHHHHH
Q 008934 174 YFSWYYVFVSASSIV-AVTCIVYIQDNLGWKVGFGVPAVIMLLSAL 218 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~-gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 218 (548)
+.++.....++|+++ ++...+++. .+|+..|++.++..++..+
T Consensus 156 a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 156 VVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHH
Confidence 999999999999975 555555554 3577777776665554433
No 111
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.48 E-value=1.5e-12 Score=132.82 Aligned_cols=139 Identities=19% Similarity=0.182 Sum_probs=104.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccc
Q 008934 50 METTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQ 129 (548)
Q Consensus 50 ~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (548)
+++...+.+..+..++..+++++.||++||+ |||+++...+++++++++.++++...+. ...-
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~~~~----------------~~~~ 143 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVGTTS----------------PLGV 143 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCCCCC----------------Ccch
Confidence 6778889999999999999999999999996 9999999999999999986665432111 1124
Q ss_pred hHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH----HHHHHHHHHHHHHHHHHHHhhhc------
Q 008934 130 LMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS----WYYVFVSASSIVAVTCIVYIQDN------ 199 (548)
Q Consensus 130 ~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~~ig~~~gp~i~~~l~~~------ 199 (548)
.+++...|+++|+|.|+-+|...+..+|..-+.. |+...+ ...++.-.|++++.++.+-....
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~-------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~ 216 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT-------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPST 216 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc-------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCC
Confidence 6778888999999999999999999999887744 555444 44455555555555444433221
Q ss_pred -----cCchhhhHHHHHH
Q 008934 200 -----LGWKVGFGVPAVI 212 (548)
Q Consensus 200 -----~g~~~~f~i~~~~ 212 (548)
.-||..|.+.++.
T Consensus 217 ~~~ld~vWRl~~glg~vp 234 (538)
T KOG0252|consen 217 YPHLDGVWRIIFGLGAVP 234 (538)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 1288887766553
No 112
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.47 E-value=3.6e-12 Score=133.96 Aligned_cols=175 Identities=10% Similarity=0.037 Sum_probs=132.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
+|..+..+...+.....++....++|.|+++++|+++.+++++.+...+...++.+++|+++||+ ||||.+..+.+...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~ 293 (393)
T PRK15011 215 RRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGV 293 (393)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 34444444444555555666667899999999999999999998888888888999999999996 99998887766554
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+......... +.+..++.+++.+++.|...+..+....|.+|+ + |++++
T Consensus 294 ~~~~~~~~~~-----------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~-------~g~~~ 342 (393)
T PRK15011 294 CFYAGMLMAH-----------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q-------AGSAT 342 (393)
T ss_pred HHHHHHHHHh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C-------cchHH
Confidence 4433333222 445566677777777777666677777888874 2 68899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
++++...++|..++|.++|++.+++||+..|.+.++..+++++..+.
T Consensus 343 ~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 343 TLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 99888899999999999999999899999998887777666655543
No 113
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.46 E-value=2e-12 Score=139.10 Aligned_cols=176 Identities=12% Similarity=0.016 Sum_probs=131.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+.+|......++....+++...++|.|+++++|+|+.++++......++..++.+++|+++||+ |||+.+..+..+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4466667777777888888899999999999999999999999999999999999999999996 999887665544443
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+..+..... ..+.....+.+++.|+..............|.+|++ .|+++.+
T Consensus 337 ~~~~~~~~~---------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~-------~~g~a~g 388 (467)
T PRK09556 337 IFTLGVYQH---------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK-------AIGVANG 388 (467)
T ss_pred HHHHHHHHh---------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh-------hHHHHHH
Confidence 332222211 013444556666666543333333345667999884 4899999
Q ss_pred HHHHHHHH-HHHHHHHHHHHhhh------------ccCchhhhHHHHHHHHHHHHHHH
Q 008934 177 WYYVFVSA-SSIVAVTCIVYIQD------------NLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 177 ~~~~~~~i-g~~~gp~i~~~l~~------------~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
+.+...++ |++++|.+.|++.+ ..||+..|++.+++.+++.+..+
T Consensus 389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 99999887 77999999999999 56899999888777776655443
No 114
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.44 E-value=5.4e-10 Score=111.57 Aligned_cols=341 Identities=15% Similarity=0.138 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWS 103 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~ 103 (548)
++.+=.|..+-++-+.+. -+++++|+|.+.+|.+.+...++..+.+++..+|+.|+ |.+|.+..++++.++|.++=..
T Consensus 19 lia~NLR~~itsvgPLL~-~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~ 96 (395)
T COG2807 19 LIAFNLRPAITSVGPLLD-EIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSL 96 (395)
T ss_pred HHHhccchhhhhhhhhHH-HHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhc
Confidence 344445666666655555 45889999999999999999999999999999999995 9999999999999988877654
Q ss_pred hcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHH
Q 008934 104 TTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVS 183 (548)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 183 (548)
. +...++.+-.+.|.|.+......++++-+.||++ -+..+++|....+
T Consensus 97 ~------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~--------~~~mtglYs~sl~ 144 (395)
T COG2807 97 G------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR--------VGLMTGLYSTSLG 144 (395)
T ss_pred c------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc--------hhhHHhHHHHHHH
Confidence 2 3567888889999999999999999999999974 4788899999999
Q ss_pred HHHHHHHHHHHHhhhcc-CchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcchhh
Q 008934 184 ASSIVAVTCIVYIQDNL-GWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQATEE 262 (548)
Q Consensus 184 ig~~~gp~i~~~l~~~~-g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (548)
+|+++++.+...+.++. ||+..+.+=+...++++++.+....|++....+.+..++ ..
T Consensus 145 ~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~~~~---------------------~~ 203 (395)
T COG2807 145 AGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATKLVSV---------------------RK 203 (395)
T ss_pred HHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccc---------------------cc
Confidence 99999999999998887 799988877776666665544332222111111110000 00
Q ss_pred hhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcccch
Q 008934 263 MYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNI 342 (548)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~ 342 (548)
.+.++ .-|.-....-.. ..+..-.+.-.-.+ ..|+. ++...-..
T Consensus 204 vw~~~-----------~aW~vtLfmGlq---------------S~~~Y~~~~WLP~i----li~~G------~sa~~aG~ 247 (395)
T COG2807 204 VWRSP-----------LAWQVTLFMGLQ---------------SLLYYIVIGWLPAI----LIDRG------LSAAEAGS 247 (395)
T ss_pred cccCc-----------hhHHHHHHHHhh---------------HHHHHHHHHHHHHH----HHHcC------CCHHHhhh
Confidence 11110 000000000000 00000001111111 12222 22222222
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchH
Q 008934 343 FAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAM 422 (548)
Q Consensus 343 ~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 422 (548)
+.++..++-.| ..+..|+..+. + .+.+........++.+++..+.+.. .+..++
T Consensus 248 llsl~~l~~~~--~~ll~P~la~R--~---~n~r~~~~~~~~~~l~G~~G~~~~P-------------------~~~~~l 301 (395)
T COG2807 248 LLSLMQLAQLP--TALLIPLLARR--S---KNQRPLVVLALLLMLVGLVGLLLAP-------------------GQLPIL 301 (395)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHH--h---cccchHHHHHHHHHHHHHHHHHHhh-------------------hhHHHH
Confidence 22222222222 22344544432 1 2333445566666666666665543 111222
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008934 423 WQLPYLVLSGLAMAFNMIGQTEFYYTEL-PKSMSSIASTLSGAGLSAANLVASLIMNAVDDITK 485 (548)
Q Consensus 423 ~~i~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~ 485 (548)
| .++.|+|.+..+|-...++...+ .++..+.-+|+.+...++=...||.++|.+-+.++
T Consensus 302 w----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 302 W----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred H----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 2 48899999999999888887764 45556677888888888888899999999876653
No 115
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.43 E-value=1.1e-11 Score=134.28 Aligned_cols=177 Identities=11% Similarity=0.050 Sum_probs=130.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+.....+...++..+.+|++..++|.|+++++|++..+++++.....++..++.+++|+++||+ |||+++.++.+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~ 328 (490)
T PRK10642 250 RSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFV 328 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHH
Confidence 3333344445566788999999999999999999999888888888899999999999999996 999998888765443
Q ss_pred HHHH-HHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 97 GMVL-LWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 97 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+... +.... ..+...+++++++.+++.+...+....+..+.+|++. |++++
T Consensus 329 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~-------Rg~~~ 380 (490)
T PRK10642 329 LAIPAFILIN---------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI-------RYSAL 380 (490)
T ss_pred HHHHHHHHHh---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-------chHHH
Confidence 3322 22111 1134566777888888777777777888889999854 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~ 222 (548)
++.+....+++.++|.+.+++.+..+ |+.++++..+..+++++..++
T Consensus 381 g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 381 AAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 98777777788899999999887654 676666555544444444433
No 116
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.41 E-value=1.4e-11 Score=125.80 Aligned_cols=173 Identities=22% Similarity=0.262 Sum_probs=153.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchH-HHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYR-MIGFGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~-~~~~~~~~~~ 95 (548)
|.++......++..........+++.|+.+.+|.++.+.+++.....++..++.++.|+++||+ |||+ .+.++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 4556666677888888888999999999988899999999999999999999999999999996 9999 9999999888
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++........ +.+...+..++.+++.+...+...+++.|..|++ +|++.+
T Consensus 254 i~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 303 (352)
T cd06174 254 LGLLLLALAP-----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPE-------ARGTAS 303 (352)
T ss_pred HHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHH-------HHHHHH
Confidence 8888777654 5677888899999999999999999999999983 499999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
+..+...++|..++|.+.+.+.+..+|+..|.+.++..+++.+..
T Consensus 304 ~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 304 GLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998999999999888777666544
No 117
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.40 E-value=1.6e-11 Score=128.99 Aligned_cols=167 Identities=15% Similarity=0.125 Sum_probs=133.5
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhc
Q 008934 26 EAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTT 105 (548)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~ 105 (548)
..+..++++....+++.|+. +.|++ +.+.....+.++..++.++.|+++||+ ||||.+..+..+..++..+....+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T PRK05122 225 LALASIGFGTIATFITLYYA-ARGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-Hcccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455667777788888876 45663 456667778888889999999999996 999999988888777776666543
Q ss_pred ccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHH
Q 008934 106 ILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSAS 185 (548)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 185 (548)
+.+..++.+++.|++.+...+.......|.+|+ ++|++++++++...++|
T Consensus 301 -----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g 350 (399)
T PRK05122 301 -----------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP-------QNRGAALGAYSVFLDLS 350 (399)
T ss_pred -----------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH-------HHHHHHHHHHHHHHHHH
Confidence 455677778899999998888888888888887 44899999999999999
Q ss_pred HHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 186 SIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 186 ~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
..++|.+.|++.++.||+..|++.+++.+++.+......++
T Consensus 351 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 351 LGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999998888777776665554443
No 118
>PRK03699 putative transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=130.37 Aligned_cols=170 Identities=12% Similarity=0.120 Sum_probs=133.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+.++......++...+.+++..++|.|+++++|+|+.+++.+.+.+.++..++.+++|+++||+ +||+++..+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3445555566666777888999999999999999999999999999999999999999999996 999998877766555
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
...+..... +.....+..++.|++.+...+...+...+..|++ +++..+
T Consensus 284 ~~~~~~~~~-----------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~g 332 (394)
T PRK03699 284 LMYLFVNTD-----------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA--------SPKLVN 332 (394)
T ss_pred HHHHHHHcC-----------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--------CHHHHH
Confidence 544444322 3344555667778888877788888877777643 355677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSAL 218 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 218 (548)
+.....++|+.++|.+.|++.+..|++..|++.+++.+++.+
T Consensus 333 ~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 333 FILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 777888999999999999999999999999887776665544
No 119
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.40 E-value=1.8e-11 Score=127.18 Aligned_cols=170 Identities=10% Similarity=0.096 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMV 99 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~ 99 (548)
+......++...........+|.|+++++|.++.+++++..........+.+++|+++||+ |||+++.++.+...+...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 280 (375)
T TIGR00899 202 RLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYT 280 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHH
Confidence 3333344444444555567789999999999999999988888777888899999999996 999999887766555544
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY 179 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 179 (548)
.....+ +.+...+.+.+.+++.+...+...++..|..|++ +++++++++
T Consensus 281 ~~~~~~-----------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 329 (375)
T TIGR00899 281 GLAADN-----------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR--------AGAATTLYT 329 (375)
T ss_pred HHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch--------hhHHHHHHH
Confidence 444333 4556666778888888888888888888887652 568999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHH
Q 008934 180 VFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 180 ~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
...++|..++|.+.|++.+..||+..|++.++..+++.+...
T Consensus 330 ~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 330 NTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988887776665543
No 120
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=1.2e-11 Score=127.80 Aligned_cols=170 Identities=11% Similarity=0.055 Sum_probs=134.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
..+......++..+.......+.+.|. +++|.++.+++.+.+...+...++.++.|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444445555555555666677774 57899999999999999999999999999999996 9999999998888887
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..+....+ ..+...+....++.+++.+...+..+++..|.+|+++ |++++++
T Consensus 284 ~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~-------~~~~~g~ 335 (377)
T TIGR00890 284 MAAMLFIP---------------------MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN-------SAANYGF 335 (377)
T ss_pred HHHHHHcc---------------------cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh-------hhhHhHH
Confidence 77666533 0122334455677788888888888899999999844 8999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHH
Q 008934 178 YYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSA 217 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~ 217 (548)
.+...++|..++|.+.|++.++.||+..|.+.+++.++++
T Consensus 336 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 336 LYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999988877665543
No 121
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.39 E-value=5.3e-11 Score=127.15 Aligned_cols=151 Identities=15% Similarity=0.075 Sum_probs=127.0
Q ss_pred hHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcC
Q 008934 45 CREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCES 124 (548)
Q Consensus 45 ~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 124 (548)
.+++|+...+-+.+.+++.++++++.+++|+|.||+ ...+.+..+.+.+.+..++....+
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~------------------- 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH------------------- 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 357888889999999999999999999999999996 877877777776666554554444
Q ss_pred CCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh------h
Q 008934 125 ATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ------D 198 (548)
Q Consensus 125 ~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~------~ 198 (548)
+.+.+++.|++.|+..+..+|+...+++.++.+++ |+.-+++++...++|.++|.++...+. .
T Consensus 133 ----s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e-------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 133 ----SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE-------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred ----hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh-------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 67889999999999999999999999999999844 899999999999999999999988763 3
Q ss_pred ccCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 199 NLGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 199 ~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
..||++.|++.+++.++..++.++..|.
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecC
Confidence 4689999999998877766665555543
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.38 E-value=1.9e-11 Score=129.71 Aligned_cols=179 Identities=8% Similarity=0.030 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNME--------TTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFG 90 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s--------~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~ 90 (548)
++..+...++..........+++.|++ +.|.+ ....+.+.++..+...++.++.|+++||+ |||+++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~ 287 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLS 287 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHH
Confidence 344445555555555556677788875 45544 36678999999999999999999999996 999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchh
Q 008934 91 CFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGA 170 (548)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (548)
.++..++..++..... +..+.+.+++.+++.|++.+...++...++.|.+|+ +.
T Consensus 288 ~~~~~v~~~l~~~~~~-------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~-------~~ 341 (418)
T TIGR00889 288 LVAWALRFGFFAYGDP-------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPV-------HI 341 (418)
T ss_pred HHHHHHHHHHHHHcCc-------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-------HH
Confidence 9988887666654220 001245567778899999998889999999999998 45
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHHHHHhhhc------cCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 171 LQSYFSWYY-VFVSASSIVAVTCIVYIQDN------LGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 171 r~~~~~~~~-~~~~ig~~~gp~i~~~l~~~------~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
|++++++.+ ...++|.++||.++|++.++ +||+..|.+.+++.+++.+.+.+..+
T Consensus 342 ~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 342 RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999997 56789999999999999987 46999998887776666555544443
No 123
>PRK03545 putative arabinose transporter; Provisional
Probab=99.37 E-value=5.3e-11 Score=124.88 Aligned_cols=173 Identities=10% Similarity=-0.042 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
++......++.....++...+++.|+++++|+|+.+++++.....++..++.++.|+++||+ |||+.+ .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 34444455556666677778889999988999999999999999999999999999999996 987654 4444444444
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.+..... .+.+.+.+..++.|++.+...+...+.+.+..|+ + |+++++++
T Consensus 285 ~~l~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~-------~~~~~g~~ 334 (390)
T PRK03545 285 LLLLPAA----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A-------TDVAMALF 334 (390)
T ss_pred HHHHHHh----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c-------HHHHHHHH
Confidence 3332211 1455666777788888877777777887777653 2 78999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 179 YVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+...++|..+||.++|++.+++|++..|+..+++.+++.+.....
T Consensus 335 ~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 335 SGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 988999999999999999999999999999888777777665543
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=2.8e-11 Score=135.45 Aligned_cols=135 Identities=15% Similarity=0.053 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHH
Q 008934 56 TNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYF 135 (548)
Q Consensus 56 g~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (548)
.....+..++..++.+++|+++||+ |||+++.++.++.+++.+++++.. +...+++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~-----------------------s~~~ll~ 653 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN-----------------------SESAMIA 653 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc-----------------------cHHHHHH
Confidence 3445566788899999999999996 999999999998888887777654 3445666
Q ss_pred HHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHH
Q 008934 136 AFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLL 215 (548)
Q Consensus 136 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i 215 (548)
.+++.+...++..+...++++|++|+ +.|++++++.+....+|+++||.+++++.+. +...+|++.+++.++
T Consensus 654 ~~~l~g~~~~~~~~~~~a~~aEl~Pt-------~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll 725 (742)
T TIGR01299 654 LLCLFGGLSIAAWNALDVLTVELYPS-------DKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALAC 725 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHH
Confidence 67777887778888999999999999 4599999999999999999999999988764 466788887777666
Q ss_pred HHHHHHh
Q 008934 216 SALSFFL 222 (548)
Q Consensus 216 ~~~~~~~ 222 (548)
+.++.+.
T Consensus 726 ~~ll~~~ 732 (742)
T TIGR01299 726 GGLLALK 732 (742)
T ss_pred HHHHHHh
Confidence 6555443
No 125
>PRK09952 shikimate transporter; Provisional
Probab=99.36 E-value=4.5e-11 Score=127.57 Aligned_cols=176 Identities=16% Similarity=0.076 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMV 99 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~ 99 (548)
.......++..+.+|....+++.|+++++|+++.....+.....+...++.++.|+++||+ ||||++..+.++..++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~ 331 (438)
T PRK09952 253 LKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTLSAF 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 3334456677888999999999999999999998776666677778888899999999996 999999888766555443
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY 179 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 179 (548)
.+.... .. ....+.+++..++.+++.+...+..+++..|.+|.+. |+++.++.+
T Consensus 332 ~~~~~~--~~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~-------r~tg~g~~~ 385 (438)
T PRK09952 332 PFFMAL--EA-----------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY-------RYSGAGVGY 385 (438)
T ss_pred HHHHHH--Hc-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch-------hHHHHhHHH
Confidence 332211 00 0123344445566678888888888999999999843 888888866
Q ss_pred HHH-HHHHHHHHHHHHHhhhcc--CchhhhHHHHHHHHHHHHHHHh
Q 008934 180 VFV-SASSIVAVTCIVYIQDNL--GWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 180 ~~~-~ig~~~gp~i~~~l~~~~--g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
... .+|++++|.+.+++.+.. +|..++...+++.+++.+..+.
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 554 589999999999998743 4788887777766666655443
No 126
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.36 E-value=2.7e-11 Score=127.52 Aligned_cols=169 Identities=15% Similarity=0.095 Sum_probs=132.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChh---HHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETT---AATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLL 101 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~ 101 (548)
..++.......+.++++.|+.+..+-... ..+.+..+..++..++.+..|+++||+ |||+++..+..+..++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 305 (408)
T PRK09874 227 TTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPM 305 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHH
Confidence 34445555556677888888765443222 245666677788889999999999996 99999998888777666655
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVF 181 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 181 (548)
.... +.+.+.+.+++.|++.+...+...+++.+..|++. |++.+++++..
T Consensus 306 ~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~ 355 (408)
T PRK09874 306 SFVQ-----------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI-------AGRIFSYNQSF 355 (408)
T ss_pred HHhc-----------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc-------ceeeehHHHHH
Confidence 5433 45667778889999999999999999888887744 78999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcC
Q 008934 182 VSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 182 ~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
.++|..+||.++|++.+..||+..|++.+++.+++.+..+...
T Consensus 356 ~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 356 RDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999887777766655443
No 127
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=3.2e-11 Score=127.70 Aligned_cols=163 Identities=7% Similarity=-0.042 Sum_probs=132.6
Q ss_pred HHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 008934 33 TVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKP 112 (548)
Q Consensus 33 ~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 112 (548)
.+++..++|.|+++.+|.++.+.+++.+...++..++.++.|+++||. ++++.+..+.++..++.+++...+
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 456777889999988999999999999999999999999999999995 888888888877777766665433
Q ss_pred CCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 113 PACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTC 192 (548)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i 192 (548)
+.+...+..++.|++.+...+...+++.|..|+ +.|++++++++...++|..+||.+
T Consensus 311 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~~~~~~~g~~~g~~l 367 (417)
T PRK10489 311 ----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPD-------EMLGRINGLWTAQNVTGDAIGAAL 367 (417)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCH-------HHHHHHHHHHHHHHhhhHhHHHHH
Confidence 455566677788888888777888899999998 449999999999999999999999
Q ss_pred HHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 193 IVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 193 ~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
.|++.+.+|++..+.+.+.+.++..++.....++
T Consensus 368 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 368 LGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999998888887776555544444443333
No 128
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=4.7e-11 Score=125.57 Aligned_cols=177 Identities=10% Similarity=0.006 Sum_probs=137.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+..+.+....++...+++++..++|.|+++ +|+++.+++.+.+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 445555556667778888999999999975 899999999999999999999999999999995 999999988877777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+..+....+ . +...+ ...+.|++.+...+.......+..+++ ++|++.++
T Consensus 283 ~~~~~~~~~---~-------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~------~~~g~~~g 332 (393)
T PRK09705 283 GFCGFIWLP---L-------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQP------AIAGKLVA 332 (393)
T ss_pred HHHHHHHcc---c-------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCH------HHHHHHHH
Confidence 665544322 1 11112 223567888887787777777777642 34899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHhcCC
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
+.+...++++.++|.+.|++.|+.| |+..|++.++..++...+.....+
T Consensus 333 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 333 FMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999876 888888877766666655554443
No 129
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.34 E-value=6.3e-11 Score=123.93 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=122.8
Q ss_pred HHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhccc
Q 008934 28 FERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTIL 107 (548)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~ 107 (548)
...+.+.....++|.|+++ .|.++.+++.+.+...++..+++++.|+++||+ |+|+++..+.++..++..... ..
T Consensus 211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~-- 285 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ-- 285 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh--
Confidence 3334445556778989875 699999999999999999999999999999996 999999888877776654432 11
Q ss_pred CCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHH
Q 008934 108 PGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSI 187 (548)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 187 (548)
......+.+.+++.+...|...+.+.|..|+++ ++...+.++...++|..
T Consensus 286 -----------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 286 -----------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE-------LVAMNQALLLSYTVGSL 335 (381)
T ss_pred -----------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH-------HHHHHHHHHHHHHHHHH
Confidence 123345666777777778888898899888743 66777777778899999
Q ss_pred HHHHHHHHhhhccCchhhhHHHHHHHHHHHHH
Q 008934 188 VAVTCIVYIQDNLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 188 ~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 219 (548)
+||.++|++.|++||++.|.+.+.+.+++.+.
T Consensus 336 igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 336 LGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887766655443
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=3.7e-11 Score=128.77 Aligned_cols=177 Identities=15% Similarity=0.100 Sum_probs=122.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHH-HHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYV-GRYRMI-GFGCFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~-Grk~~~-~~~~~~~ 94 (548)
+.++...+..++.....|+...++|.|++++.|++..+++++...+.++..++.+++|+++||+. |||+.. .....+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 44566666677777788889999999999999999999999999999999999999999999941 344332 2222333
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++...+.+.. ..+.+...+..++.|.+..........+..|.+|+++ |+++
T Consensus 333 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~g~~ 384 (452)
T PRK11273 333 TIATIVYWLNP---------------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA-------AGTA 384 (452)
T ss_pred HHHHHHHHHhc---------------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh-------hhhH
Confidence 33333322211 0123333344444444332222233455678888844 8999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHhhhccCchhhhHHHHHHHHHHHHHHH
Q 008934 175 FSWYYVFVSASSIV-AVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 175 ~~~~~~~~~ig~~~-gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
+++.+...++|+.+ +|.+.|++.|+.||+..|++.++..+++++...
T Consensus 385 ~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 385 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99999888888655 799999999999999999888776666655443
No 131
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.34 E-value=2e-11 Score=126.99 Aligned_cols=167 Identities=13% Similarity=0.002 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.++......++....++....+++.|+++++|.++.+++.+.....+...++.+++|+++||+ |||+.+..+..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 466666677788888888999999999999999999999999999999999999999999996 9999887655544333
Q ss_pred H-HHHH-HhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 98 M-VLLW-STTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 98 ~-~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
. .+.. ... ..+.+.+.....+.+++.+...+...+++.|.+|+++ |++++
T Consensus 299 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~~~~~ 350 (394)
T TIGR00883 299 AVPLLMALLD---------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV-------RYTGA 350 (394)
T ss_pred HHHHHHHHhc---------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc-------eeeEe
Confidence 2 2221 111 1144556667778888888888999999999999855 77888
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHH
Q 008934 176 SWYY-VFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIM 213 (548)
Q Consensus 176 ~~~~-~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~ 213 (548)
++.+ ....+|..++|.++|++.++.| |+..++...+..
T Consensus 351 ~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 351 SLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 8754 4456899999999999999888 777666555433
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.33 E-value=7.7e-11 Score=123.40 Aligned_cols=169 Identities=11% Similarity=0.043 Sum_probs=143.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++..+...++...+++....+.++|++ ++|.++.++|.+.+...+...+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 55667777778888888889999999996 4999999999999999999999999999999996 999999999999998
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
...+.+.++ +.+.+++.+.+.|+..+...+....++.+. |+++ |+++.+
T Consensus 283 ~~~~~~~~~-----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~-------~~~~q~ 331 (382)
T TIGR00902 283 RWAIIGAIE-----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE-------IAKLQA 331 (382)
T ss_pred HHHHHHhHh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh-------HHHHHH
Confidence 888777655 677788889999999999999999999987 7643 788899
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHH
Q 008934 177 WYYV-FVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 177 ~~~~-~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 219 (548)
+++. ...+|..+||.++|++.|++|+ ..|.+.+++.+++.++
T Consensus 332 ~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 332 LYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 8764 5689999999999999999986 6677777766655544
No 133
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.33 E-value=1.5e-11 Score=130.33 Aligned_cols=165 Identities=8% Similarity=-0.006 Sum_probs=129.3
Q ss_pred HHHHHHHHhhHHHHHHHHhHhh---cCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHH
Q 008934 27 AFERMATVGFTPNMILYLCREY---NMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWS 103 (548)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~l---g~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~ 103 (548)
++....+......++.|+.+.+ +.+..+.+.+.++..+...++.+++|+++||+ ||||.+..+.++..++..+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 233 IGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHh
Confidence 3333444444556777776543 67778889999999999999999999999996 9999999988888888777776
Q ss_pred hcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH-HHHHH
Q 008934 104 TTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW-YYVFV 182 (548)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~ 182 (548)
+. +.+.+...+.+.+++.+...+....++.+.+|++. |++.++. ++...
T Consensus 312 ~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------~a~~~~~~~~~~~ 361 (420)
T PRK09528 312 AT-----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL-------SATIYLVGFQFAK 361 (420)
T ss_pred cc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc-------eeeeeeehHHHHH
Confidence 54 56677778888998888877888888899998744 5666554 55677
Q ss_pred HHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 183 SASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 183 ~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
++|.+++|.+.|++.|.+||+..|.+.+++.++..++.+.
T Consensus 362 ~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 362 QLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999887766655544443
No 134
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.32 E-value=1.8e-09 Score=107.58 Aligned_cols=157 Identities=13% Similarity=0.070 Sum_probs=122.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHh
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWST 104 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~ 104 (548)
..+.+-...-.....+..-++...|.+..++.++....+.+..+++..+|.++|++ ||||.+.+......+.-.+-..+
T Consensus 85 ~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s 163 (528)
T KOG0253|consen 85 MGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS 163 (528)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC
Confidence 33444444555566666777888999999999999999999999999999999995 99999988877666655555554
Q ss_pred cccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHH
Q 008934 105 TILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSA 184 (548)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 184 (548)
+ ++..+.+.|.+.+.|.|+ .|...++-.+..|... |..-.-.. ....+
T Consensus 164 p-----------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~-------r~~~~V~~-~~wai 211 (528)
T KOG0253|consen 164 P-----------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH-------RWLLTVMS-FFWAI 211 (528)
T ss_pred C-----------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC-------CCcchhHH-HHHHH
Confidence 4 778899999999999999 8999999999999865 44444444 56788
Q ss_pred HHHHHHHHHHHhhhccCchhhhHHHHHHHH
Q 008934 185 SSIVAVTCIVYIQDNLGWKVGFGVPAVIML 214 (548)
Q Consensus 185 g~~~gp~i~~~l~~~~g~~~~f~i~~~~~~ 214 (548)
|.++...+.=.+...+|||+-.........
T Consensus 212 g~v~ea~law~vm~~~gwr~~l~~~~~pl~ 241 (528)
T KOG0253|consen 212 GQVFEALLAWGVMSNFGWRYLLFTSSTPLM 241 (528)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhHHH
Confidence 888888776666677899987776664333
No 135
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.32 E-value=6.8e-11 Score=124.55 Aligned_cols=166 Identities=11% Similarity=-0.047 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWS 103 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~ 103 (548)
...++....++.+..++|.|+++ .|+++.+++.+...+.++..++.++.|+++||+ |||+.+..+.+...++..++..
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 227 ISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh
Confidence 34445556677777888999764 799999999999999999999999999999996 9999988876666555555443
Q ss_pred hcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHH
Q 008934 104 TTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVS 183 (548)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 183 (548)
.+ +.+.+.+..++.|++.++..+...++..|.+|+++ |+++.++.+....
T Consensus 305 ~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~g~~~g~~~~~~~ 354 (406)
T PRK11551 305 AP-----------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV-------RGTGVGAAVAVGR 354 (406)
T ss_pred cC-----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh-------hhhhhhHHHHhhh
Confidence 32 34445556667788777778888999999999844 8999999999999
Q ss_pred HHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHH
Q 008934 184 ASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 184 ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~ 221 (548)
+|..+||.+.|++.++.+ |...+++.....+++.+..+
T Consensus 355 ~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 355 LGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988654 55555555555444444433
No 136
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.32 E-value=1e-15 Score=163.71 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHH
Q 008934 53 TAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMP 132 (548)
Q Consensus 53 ~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (548)
.+.+++.++..++..++.+++|+++||+ |||+++.++.++..++.++..+++. ..+.+.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~--------------------~~~~~~ 104 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS--------------------YNNFWM 104 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc--------------------cccccc
Confidence 3568899999999999999999999996 9999999999999999988887541 015678
Q ss_pred HHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cCchhhhHHH
Q 008934 133 LYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN---LGWKVGFGVP 209 (548)
Q Consensus 133 ~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~---~g~~~~f~i~ 209 (548)
+.++|++.|++.|+..+....++.|..|++. |++..++......+|..++..++-.+.+. .+||..+.+.
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~-------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~ 177 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPPKH-------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFG 177 (451)
T ss_pred ccccccccccccccccccccccccccccccc-------cccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999844 88888888888888888887665444332 3599999887
Q ss_pred HHHHHHHHHH
Q 008934 210 AVIMLLSALS 219 (548)
Q Consensus 210 ~~~~~i~~~~ 219 (548)
++..++..+.
T Consensus 178 ~~~~l~~~~~ 187 (451)
T PF00083_consen 178 AIPSLLVLLL 187 (451)
T ss_pred cccccccccc
Confidence 7765544433
No 137
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.31 E-value=1.1e-11 Score=108.86 Aligned_cols=132 Identities=15% Similarity=0.183 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHH
Q 008934 60 FIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGL 139 (548)
Q Consensus 60 ~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 139 (548)
+.+.++..++.++.|+++||+ |||+.+..+..+..++..+..... +.+.+.+.+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 60 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS-----------------------NITVLIIARFL 60 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc-----------------------cHHHHHHHHHH
Confidence 445677888999999999996 999999999888888877776544 56778888999
Q ss_pred HHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHH
Q 008934 140 MSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 140 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 219 (548)
.|++.+...+...+++.|.+|+++ |++++++.+...++|..++|.+.+++.+..+|+..|++.+...+++.+.
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPEE-------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChhh-------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999844 8999999999999999999999999999889999998887766655554
Q ss_pred HHh
Q 008934 220 FFL 222 (548)
Q Consensus 220 ~~~ 222 (548)
...
T Consensus 134 ~~~ 136 (141)
T TIGR00880 134 LAF 136 (141)
T ss_pred Hhh
Confidence 443
No 138
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.31 E-value=4.1e-11 Score=125.70 Aligned_cols=191 Identities=12% Similarity=0.069 Sum_probs=149.5
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhH-hhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-hH
Q 008934 8 INKNPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCR-EYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGR-YR 85 (548)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Gr-k~ 85 (548)
+....+.+||.+++.....++....++.+.+.+-.|+++ +.+-+.+..|+++++..++..+..+..|+...|. ++ |+
T Consensus 25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~ 103 (488)
T KOG2325|consen 25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKK 103 (488)
T ss_pred cccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCccc
Confidence 333567889999999999999999999999999999876 5888899999999999999999999999999996 75 88
Q ss_pred HHHHHHHHHHHHHHHH-HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCC
Q 008934 86 MIGFGCFTCLLGMVLL-WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDG 164 (548)
Q Consensus 86 ~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 164 (548)
.++.|.++.++|.++. .+.. .|. ...++++++|++.|+|.|. .+..-+++++.-..++
T Consensus 104 Pli~s~ii~~~g~llY~~l~~-~~~------------------~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d- 162 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLYLALAY-VPN------------------GVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED- 162 (488)
T ss_pred CHHHHHHHHHHHHHHHHHHHh-ccc------------------chHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc-
Confidence 8889999999999988 4433 232 2678999999999999887 4777888888666655
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh----hc---------cCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 165 TKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ----DN---------LGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 165 ~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~----~~---------~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
|.++++....+..+|.++||.++..+. +. .-|..+-++.+++.++.++++....++
T Consensus 163 ------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 163 ------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred ------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 788888877777777777777654433 11 114556666777666666665555443
No 139
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=1e-10 Score=124.73 Aligned_cols=177 Identities=13% Similarity=0.048 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHH-HHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYV-GRYRMI-GFGCFTCL 95 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~-Grk~~~-~~~~~~~~ 95 (548)
.++.+....++....++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+. ++|+.. ....+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 3455555566667777788889999999999999999999999999999999999999999952 222222 22111111
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+....+.... . .+........++.|.+............+|.+|+ +.|+++.
T Consensus 324 ~~~~~~~~~~---~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 375 (434)
T PRK11663 324 LSVGSLWLMP---F------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHK-------EAAGAAT 375 (434)
T ss_pred HHHHHHHHcc---c------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccH-------hhHHhHH
Confidence 1111111111 0 0222222333333433222222334556777776 4499999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
++.+...++|.+++|.+.|++.++.||+..|++.+++.+++.+....
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888877766655443
No 140
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=5.6e-11 Score=124.45 Aligned_cols=157 Identities=11% Similarity=0.108 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q 008934 22 IIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLL 101 (548)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~ 101 (548)
......+.....++...++|.|+.+++|+++.+++++.....++..++.++.|+++||+ |||+.+.++..+..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33444445555667778899999999999999999999999999999999999999996 99999988876553322222
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVF 181 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 181 (548)
.... .+.+.+.+..++.+...+...+..++++.|.+|+++ |++++++.+..
T Consensus 322 ~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~ 372 (405)
T TIGR00891 322 FAIG----------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ-------RAAGLGFTYQL 372 (405)
T ss_pred HHhC----------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch-------hHHHhhHHHHH
Confidence 1111 134455566566777777777888899999998844 89999999999
Q ss_pred HHHHHHHHHHHHHHhhhccC-chhhhHH
Q 008934 182 VSASSIVAVTCIVYIQDNLG-WKVGFGV 208 (548)
Q Consensus 182 ~~ig~~~gp~i~~~l~~~~g-~~~~f~i 208 (548)
.++|+.++|.+.|++.++.| |+..|..
T Consensus 373 ~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 373 GNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 99999999999999999888 7766554
No 141
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=1e-10 Score=122.62 Aligned_cols=163 Identities=13% Similarity=0.134 Sum_probs=132.1
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhc
Q 008934 26 EAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTT 105 (548)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~ 105 (548)
.++....+..+..+.+.|+++ .|++. .+.....+.++..+++++.|++.||+ ||||.+..+..+..++..+.....
T Consensus 225 ~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 300 (392)
T PRK12382 225 LALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP 300 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc
Confidence 344456666777888888764 56654 56667778888889999999999996 999999999888888777666533
Q ss_pred ccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHH
Q 008934 106 ILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSAS 185 (548)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 185 (548)
+.+...+..++.|++.+...+...+...|.+|+ ++|++++++++...++|
T Consensus 301 -----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g 350 (392)
T PRK12382 301 -----------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPS-------QVRGTALGGYAAFQDIA 350 (392)
T ss_pred -----------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCH-------HHHHHHHHHHHHHHHHH
Confidence 455667778889999998888888888999887 44999999999999999
Q ss_pred HHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 186 SIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 186 ~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
..++|.+.|++.++.||+..|.+.+++.+++.+..+.
T Consensus 351 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 351 YGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999988877776665543
No 142
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.29 E-value=1.9e-09 Score=109.99 Aligned_cols=370 Identities=15% Similarity=0.090 Sum_probs=202.1
Q ss_pred HhhHHHHHHHHhHhhcC---Ch----hHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH-HHHHHHHHHHHhc
Q 008934 34 VGFTPNMILYLCREYNM---ET----TAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF-TCLLGMVLLWSTT 105 (548)
Q Consensus 34 ~~~~~~l~~yl~~~lg~---s~----~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~-~~~~~~~l~~~~~ 105 (548)
..++.+.|+|+++..+- ++ +-.+...++..+..++..|+-|.++|+. |+||...-.+. +-++....+...+
T Consensus 32 ivtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~ 110 (438)
T COG2270 32 IVTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP 110 (438)
T ss_pred eeeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC
Confidence 34667899999987665 44 3445567788888889999999999996 88876654433 3444444444433
Q ss_pred ccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHH
Q 008934 106 ILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSAS 185 (548)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 185 (548)
. ..+++..++..++..++.........++..|..++++. ++..+.-+....+|
T Consensus 111 ---~-----------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~-------~riS~lg~~~gylg 163 (438)
T COG2270 111 ---P-----------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNM-------GRISGLGWALGYLG 163 (438)
T ss_pred ---C-----------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCcccc-------Cccccccccccccc
Confidence 1 13566677778888999999999999999999998663 33333333344455
Q ss_pred HHHHHHHH--HH-hh---------------hccCchhhhHHHHHHHHHHHHHHHhcCCceecc-CCCCCCchhHHHHHHH
Q 008934 186 SIVAVTCI--VY-IQ---------------DNLGWKVGFGVPAVIMLLSALSFFLASPFYVKS-KANTSLLPGLTQVLVA 246 (548)
Q Consensus 186 ~~~gp~i~--~~-l~---------------~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 246 (548)
+.+.-+.. +. .. +...-|..+.++++-.++..+=++...++..+. .+..+.+..-.+-+..
T Consensus 164 s~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~ 243 (438)
T COG2270 164 SVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKS 243 (438)
T ss_pred chHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHH
Confidence 54433332 11 11 112235555555553333333222222221111 1111222222222222
Q ss_pred HHhhccCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhcc
Q 008934 247 SFKNRRTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMD 326 (548)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (548)
.+|+.+.+ .+...++-...+ ..+.+.....+ .....
T Consensus 244 t~k~i~~~---------------------~~i~~FLiA~~~---------------------~~DGv~til~~--~~~fg 279 (438)
T COG2270 244 TFKEIRGR---------------------KNLVLFLIARFF---------------------YIDGVNTILAM--GGVFG 279 (438)
T ss_pred HHHHHhcc---------------------cchHHHHHHHHH---------------------HHhhHHHHHHH--HHHHH
Confidence 23321110 011122211110 01112222211 11111
Q ss_pred CCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 327 RHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAIN 406 (548)
Q Consensus 327 ~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~ 406 (548)
.. .+++. +.+.+...+..-++...-.-..+++.+| ++.++.+.+++++..+..+...+.+
T Consensus 280 ~~---~~gls-----~~~lll~g~~~~vvA~lg~ii~g~Ld~r---fg~k~vl~~~lvi~~~~~~~~~~~~--------- 339 (438)
T COG2270 280 AA---DLGLS-----STELLLIGIALSVVAALGAIIAGFLDER---FGSKPVLMIGLVILSIAALYLIFLE--------- 339 (438)
T ss_pred HH---HcCcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCceeehHHHHHHHHHHHHHHHcc---------
Confidence 10 01122 2222222222222222222233444445 6666777777777665555444443
Q ss_pred cCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 008934 407 EGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKR 486 (548)
Q Consensus 407 ~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~ 486 (548)
....+...-.+.|...+-....-=++..+.+|+++.|...|++++....++.+||.+.+.+.++++.
T Consensus 340 -------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 340 -------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred -------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 1222333446677777777777778889999999999999999999999999999999999887752
Q ss_pred CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHh
Q 008934 487 GGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLAC 523 (548)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~ 523 (548)
...-+..+.++.++++++.+..
T Consensus 407 ---------------~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 407 ---------------SRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred ---------------hhhHHHHHHHHHHhhHhhEEee
Confidence 1233556666777776655443
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.29 E-value=8.5e-11 Score=127.27 Aligned_cols=150 Identities=12% Similarity=0.104 Sum_probs=114.8
Q ss_pred hhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008934 35 GFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPA 114 (548)
Q Consensus 35 ~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 114 (548)
....++|.|+++++|+++.+++++.+...++..++.+++|+++||+ |||+++..+.++..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4567899999999999999999999999999999999999999996 999998887766555444333211
Q ss_pred cccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 115 CDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIV 194 (548)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~ 194 (548)
..+.+......++.+....+..+..++++.|.+|++ +|++++++.+...++|+.+||.++|
T Consensus 363 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 363 ------------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE-------QRAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred ------------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH-------HhhcccchhhhhhhHHHHHHHHHHH
Confidence 112333333344433333334566778889999874 4899999999999999999999999
Q ss_pred HhhhccCchhhhHHHHHHH
Q 008934 195 YIQDNLGWKVGFGVPAVIM 213 (548)
Q Consensus 195 ~l~~~~g~~~~f~i~~~~~ 213 (548)
++.+++||+..+...+...
T Consensus 424 ~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 424 LIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHhccCChHHHHHHHHHHH
Confidence 9999999988876555433
No 144
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.29 E-value=1.1e-10 Score=121.07 Aligned_cols=175 Identities=17% Similarity=0.065 Sum_probs=128.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchH--HHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYR--MIGFGCFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~--~~~~~~~~~ 94 (548)
|.++......++.....+.+..+++.|+++++|.++.+++++.....++..++.+++|+++||+ |||+ ..... ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~-~~~ 292 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFAR-KTA 292 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHH-HHH
Confidence 4566677778888888899999999999999999999999999999999999999999999996 9986 22111 111
Q ss_pred HHH---HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 95 LLG---MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 95 ~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
.++ ..+..... .. ..+.+.......+.+.+.+ ..+...++.+|.+|+++ |
T Consensus 293 ~~~~~~~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~ 345 (399)
T TIGR00893 293 IIAGLVLSLLMFAT--NY-----------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI-------A 345 (399)
T ss_pred HHHHHHHHHHHHHh--cc-----------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH-------H
Confidence 111 11111111 00 0022233333333334444 68899999999999844 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHH
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~ 220 (548)
++++++.+...++|..++|.+.|++.+..| |+..|.+.++..+++.+..
T Consensus 346 g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 346 GLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888 9999988877766665544
No 145
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.28 E-value=6e-11 Score=120.64 Aligned_cols=180 Identities=18% Similarity=0.175 Sum_probs=142.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHH-HHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYV-GRYRMIGFG-CFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~-Grk~~~~~~-~~~~ 94 (548)
|.+|.+.+..++--+.=|++..+.|.|+.++.|+|..++++..+.+=++...++++.||++||++ |||....+. ++..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 77888888888888899999999999999999999999999999999999999999999999987 777655443 3344
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
+++.+++..++ +.+.++..+..+++|.-.-+-.-..-....|..|.+ .-+++
T Consensus 332 ~~~~~~~w~~~---------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~-------AaGtA 383 (448)
T COG2271 332 TASLVLYWLAP---------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK-------AAGTA 383 (448)
T ss_pred HHHHHHHHcCC---------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh-------hccch
Confidence 44445554433 225677777777777665554545556667888874 47889
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcC
Q 008934 175 FSWYYVFVSA-SSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 175 ~~~~~~~~~i-g~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
.|....+..+ |.+.+....|++.|.+||...|++..+..+++.+.+....
T Consensus 384 ~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 384 TGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9998888887 8888888899999999999999987777666666554433
No 146
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=2.7e-10 Score=122.02 Aligned_cols=185 Identities=18% Similarity=0.169 Sum_probs=152.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccch--HHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRY--RMIGFGCFT 93 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk--~~~~~~~~~ 93 (548)
.|.+..-++..++.+-+...+..+...|.++++|++..+...+..+..+...++.+++|++.||+ |.| +++++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 57777778888999999999999999999999999999999999999999999999999999995 999 899888887
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
+.+..+.-.+.- .+.. .+..+.+.+.+.-.+.|+..|..++...++.++..|+++ .+.
T Consensus 359 ~~~i~~~g~~G~-~~~~--------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~-------e~e 416 (477)
T PF11700_consen 359 WIIIPLYGLFGF-WPSF--------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR-------EAE 416 (477)
T ss_pred HHHHHHHHHHHh-hhcc--------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch-------hhH
Confidence 644333222211 1110 011256677777888999999999999999999999965 689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHhc
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
.|+++....-..+.+||.+.|.+.+..| .|.++....+..+++++++...
T Consensus 417 fFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 417 FFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999998876 8888887777777777666443
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=3.2e-10 Score=119.55 Aligned_cols=176 Identities=13% Similarity=0.054 Sum_probs=129.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHH-HHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIG-FGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~-~~~~~~~ 95 (548)
|.++......++....+++...++|.|++ ++|+++.+++.+.....++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 34455566677788888999999999975 6999999999999999999999999999999996 9988764 3333333
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++...+....... ..+.+...+..++.|++.+...+ ..+...+..|+ + |++++
T Consensus 300 ~~~~~l~~~~~~~------------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-~-------~g~~~ 352 (402)
T TIGR00897 300 IFTLALYYIPQHF------------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-H-------KGAAM 352 (402)
T ss_pred HHHHHHHHHHHcc------------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-h-------hHHHH
Confidence 3322222211000 01345566667777887777544 34555554432 3 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
++.+...++|..++|.+.+++.+.+||...|++.+++.+++.+...
T Consensus 353 g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 353 SVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988877666555443
No 148
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.25 E-value=4.3e-10 Score=121.75 Aligned_cols=179 Identities=11% Similarity=0.066 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHH-HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIF-IWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~-~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.+..+...++...+.+....+.+.|+.+++|+++.+.+++.. ...++..++.+++|+++||+ |+||.+.++.++..+.
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344444445566666677778899998899999999999974 55679999999999999996 9999888776655554
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
...+......+ .+.+.+....++..++.|...++..++..+..+++. +++.+++
T Consensus 303 ~l~~~~l~~~~-------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~-------~~t~~gl 356 (491)
T PRK11010 303 NAGYWLLSITD-------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF-------SATQFAL 356 (491)
T ss_pred HHHHHHHHhcc-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-------cHHHHHH
Confidence 43332211000 133344445556555666666777888888888754 6788999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcC
Q 008934 178 YYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
.+...++|..+++.+.|++.+.+||+..|.+.+++.+++++.....+
T Consensus 357 ~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 357 LSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889999999999999999999999999988888877766665543
No 149
>PRK10504 putative transporter; Provisional
Probab=99.25 E-value=2.6e-10 Score=122.75 Aligned_cols=158 Identities=14% Similarity=0.036 Sum_probs=127.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+...+...++...++.....+.|.|++..+|.++.+++++.....++..++.++.|+++||+ |||+++..+..+..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4566666677777787777777889999888999999999999988888888999999999996 999999988887777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+..++.... . ..+.+.+.+..++.|++.+...+..+.+..+.+|+++ ++.+++
T Consensus 340 ~~~~~~~~~---~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~ 392 (471)
T PRK10504 340 VSLLFMLVA---L-----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL-------ASSGNS 392 (471)
T ss_pred HHHHHHhcc---c-----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh-------ccchHH
Confidence 666555422 0 1133344455677788888888889999999998844 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCc
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGW 202 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~ 202 (548)
+.+....+|..+|+.++|.+.+..|+
T Consensus 393 ~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 393 LLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999998876665
No 150
>PRK15075 citrate-proton symporter; Provisional
Probab=99.25 E-value=2.6e-10 Score=121.55 Aligned_cols=151 Identities=11% Similarity=-0.002 Sum_probs=109.9
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH-HHHH
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMV-LLWS 103 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~-l~~~ 103 (548)
..++....++++..++|.|+++.+|+++.++++......++..++.+++|+++||+ ||||++..+.....+... ....
T Consensus 246 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~ 324 (434)
T PRK15075 246 MVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALSW 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHH
Confidence 34456677888899999999999999999999999889999999999999999996 999998876554332221 1111
Q ss_pred hcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHH
Q 008934 104 TTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVS 183 (548)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 183 (548)
.. . ..+.........+.+++.+...+....+..|.+|++. |++++++.+...+
T Consensus 325 ~~--~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~-------rg~~~g~~~~~~~ 377 (434)
T PRK15075 325 LV--A------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV-------RTAGFSLAYSLAT 377 (434)
T ss_pred HH--c------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc-------cchheeHHHHHHH
Confidence 11 0 0122233333445566666666677788899999855 7888888665554
Q ss_pred -HHHHHHHHHHHHhhhccCch
Q 008934 184 -ASSIVAVTCIVYIQDNLGWK 203 (548)
Q Consensus 184 -ig~~~gp~i~~~l~~~~g~~ 203 (548)
+++.++|.+.+++.++.|++
T Consensus 378 ~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 378 AIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHhhhHHHHHHHHHHhcCCc
Confidence 46788999999999988853
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=8.2e-10 Score=113.49 Aligned_cols=177 Identities=14% Similarity=0.030 Sum_probs=146.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+.++..+...++...+.|...+++.+|+++..|+|....+++...+.++..++..++|+++|| +.|+.+.....+..+
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 567888889999999999999999999999999999999999999999999999999999998 888998888888777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
....+.+.. .+.+..++..++.|+..+........-.++..|++ ++.+.+
T Consensus 289 ~~l~l~~~~----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~--------~~~a~s 338 (394)
T COG2814 289 ALLALTFTG----------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPDA--------ADLAGS 338 (394)
T ss_pred HHHHHHHhc----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCc--------hHHHHH
Confidence 777766544 14455555566667766665555555556533332 688999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
++....|+|..+|..++|.+.+++|+....++.++..++++.+.+...+
T Consensus 339 l~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 339 LNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988888777665444
No 152
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.22 E-value=2.7e-10 Score=122.26 Aligned_cols=173 Identities=11% Similarity=0.048 Sum_probs=135.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHH--HH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY-VGRYRMIGFGC--FT 93 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~-~Grk~~~~~~~--~~ 93 (548)
|.++..+...++..++++....+++.|++ ++|+++.+++++.++..++..++.+++|+++||+ .++|+...++. +.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 44556666677777888888899999986 5899999999999999999999999999999973 13444443333 22
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++.+++.... +.+.+++.+++.|++.+...++..+++.|.+|+++ +++
T Consensus 320 ~~l~~ll~~~~~-----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~-------~g~ 369 (455)
T TIGR00892 320 NGLTHLLCALAG-----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR-------FSS 369 (455)
T ss_pred HHHHHHHHHHhc-----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH-------Hhh
Confidence 233333333332 56677788899999999999999999999998844 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc-CchhhhHHHHHHHHHHHHHH
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNL-GWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~-g~~~~f~i~~~~~~i~~~~~ 220 (548)
.+++++...++|..+||.++|++.+.. +|+..|++.+++.+++.+..
T Consensus 370 ~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 370 AVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999877 59999998887766655533
No 153
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=8.3e-10 Score=117.79 Aligned_cols=173 Identities=12% Similarity=-0.016 Sum_probs=120.9
Q ss_pred HHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCC
Q 008934 31 MATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGA 110 (548)
Q Consensus 31 ~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~ 110 (548)
.....+..+.+.+ .+++|++..++++......++..++.+++|+++||+ |||+.+.+++++..++..++.+......
T Consensus 298 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 374 (481)
T TIGR00879 298 TGINAIMYYSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV- 374 (481)
T ss_pred hCCeehHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc-
Confidence 3333444445544 567899999999999999999999999999999996 9999999998887777766653210000
Q ss_pred CCCCcccccCCCcCCCccchHHHHHHHHHHHHhcc-ccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHH
Q 008934 111 KPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSG-GIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVA 189 (548)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~g 189 (548)
...+.......+....+.+.+.+ ...+....+..|.+|++ .|++++++.+...++|++++
T Consensus 375 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~~~~~lg~~i~ 435 (481)
T TIGR00879 375 ------------TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLS-------LRPKGISIAVAANWLANFIV 435 (481)
T ss_pred ------------CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChH-------HHHHHHHHHHHHHHHHHHHH
Confidence 00000002222222222222222 23466677779999984 48999999999999999999
Q ss_pred HHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 190 VTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 190 p~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
|.+.+++.++.+|+..|++.+++.+++.+..+...+
T Consensus 436 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 436 GFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 999999999889999999888777766665544433
No 154
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.20 E-value=3.5e-10 Score=115.22 Aligned_cols=186 Identities=13% Similarity=0.057 Sum_probs=150.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.|.+|++....+...-++.++..++|.|+++++|.++.++|.+...+.+...+..++||+|+||+ |.+|+.++....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999996 99999999998888
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++..+..... +. .....+.+........+++..|.-...+..++...+|++ -+.+.
T Consensus 296 ~~~~~l~~~~--~~--------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~--------~G~v~ 351 (417)
T COG2223 296 LAAALLSLFL--TG--------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE--------TGAVT 351 (417)
T ss_pred HHHHHHHccc--cc--------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh--------hhHHH
Confidence 8887777543 10 000123445555455566666666667777888778763 57888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
++.....++|+..-|...+...+..| +...|++.....+++.++.+....+
T Consensus 352 G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 352 GIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89888999999999999999888887 9999999888888777766554443
No 155
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.18 E-value=1.3e-09 Score=116.03 Aligned_cols=167 Identities=17% Similarity=0.024 Sum_probs=110.5
Q ss_pred HHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHH-hc
Q 008934 27 AFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWS-TT 105 (548)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~-~~ 105 (548)
++....+|++..++|.|+++++|++..+++...++..+...++.++.|+++||+ |||+++.++.++..+....... ..
T Consensus 253 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~ 331 (432)
T PRK10406 253 AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQ 331 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344778899999999999999999999999988888888889999999999995 9999887766544333221211 11
Q ss_pred ccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHH-
Q 008934 106 ILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSA- 184 (548)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i- 184 (548)
. ..+....+....+...+.+...+....+.+|.+|++. |++++++.+...++
T Consensus 332 ---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~-------r~t~~g~~~~~g~~~ 384 (432)
T PRK10406 332 ---N-----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV-------RALGVGLSYAVANAL 384 (432)
T ss_pred ---c-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc-------cchhhhHHHHHHHHH
Confidence 0 0012222211222222333334556788899999854 89999998876654
Q ss_pred HHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHh
Q 008934 185 SSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 185 g~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~ 222 (548)
++...|.+.+++. ..| |...++..++..+++.+..++
T Consensus 385 ~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 385 FGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4555888777664 445 555666555555555544443
No 156
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.18 E-value=3.9e-09 Score=108.28 Aligned_cols=135 Identities=10% Similarity=-0.004 Sum_probs=108.1
Q ss_pred HHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCccc
Q 008934 38 PNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQ 117 (548)
Q Consensus 38 ~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 117 (548)
....+|.++-+| +...+-|...+|.+.+....+.+-|+.||+ |-|-..+++..+..+|..+=.++. .|..
T Consensus 65 a~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v------- 134 (480)
T KOG2563|consen 65 APINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFV------- 134 (480)
T ss_pred hhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccc-------
Confidence 456778888888 888888999999999999999999999996 999999999999999988877765 3421
Q ss_pred ccCCCcCCCccchH--HHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 118 LRNGCESATWSQLM--PLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVY 195 (548)
Q Consensus 118 ~~~~~~~~~~~~~~--~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~ 195 (548)
+..++ ..+.+..+.+...-.+...-.-+.+-+|++++ |+.+-..-..++.+|.++|..+...
T Consensus 135 ---------~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q-------ra~A~~~~v~~n~LGvavg~llppi 198 (480)
T KOG2563|consen 135 ---------PPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ-------RAIATVLGVMGNPLGVAVGFLLPPI 198 (480)
T ss_pred ---------cccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch-------hhhhhhHHHhcchHHHHHHhhccce
Confidence 01344 67788888888887777777788899999955 7888877777777888877777666
Q ss_pred hhh
Q 008934 196 IQD 198 (548)
Q Consensus 196 l~~ 198 (548)
+..
T Consensus 199 lV~ 201 (480)
T KOG2563|consen 199 LVP 201 (480)
T ss_pred ecC
Confidence 654
No 157
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.17 E-value=9.3e-10 Score=113.28 Aligned_cols=155 Identities=11% Similarity=0.065 Sum_probs=128.5
Q ss_pred chHHHHHHHHHHHHHHHHhhH-HHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFT-PNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
|.++......++....+++.. .+.|.|+++.+|.++.+.+.+.....++..++.++.|++.||+ |||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 445555556666666776666 7788888878999999999999999999999999999999996 99999988877766
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++..+..... + +.+.+.+..++.|++.+...+...+++.|.+|+ +.|++++
T Consensus 289 ~~~~~~~~~~---------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~ 339 (365)
T TIGR00900 289 LAILVVGLTP---------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA-------ELLGRVF 339 (365)
T ss_pred HHHHHHHhhc---------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------HHHHHHH
Confidence 6666655433 1 256677788899999999999999999999998 4499999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccC
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLG 201 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g 201 (548)
++.+...++|..++|.++|++.|.+|
T Consensus 340 ~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 340 GAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999988654
No 158
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.3e-10 Score=109.89 Aligned_cols=372 Identities=12% Similarity=0.110 Sum_probs=214.6
Q ss_pred hHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 008934 36 FTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPAC 115 (548)
Q Consensus 36 ~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 115 (548)
--.-+.++.+++.+++.++..++.+++++-..+.+.++|++.||.+|-|..-++-+....+|.+.++... +
T Consensus 62 ~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg-i-------- 132 (459)
T KOG4686|consen 62 APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG-I-------- 132 (459)
T ss_pred CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch-H--------
Confidence 3345677778888899999999999999999999999999999988887654444444456666555322 0
Q ss_pred ccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 116 DQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVY 195 (548)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~ 195 (548)
...+|....+|++.|+|.-....+.+.++..+|..+ +.+.++++......+|+..-..+-++
T Consensus 133 -----------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGK-------ELn~vfGlqlSvAR~GstvNf~lm~~ 194 (459)
T KOG4686|consen 133 -----------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGK-------ELNFVFGLQLSVARLGSTVNFLLMPF 194 (459)
T ss_pred -----------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCc-------cccchhhHHHHHHHhhceeeeeecHH
Confidence 116788999999999999888888899999999874 48999999999999999888888888
Q ss_pred hhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCCCCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCC--c--
Q 008934 196 IQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGS--M-- 271 (548)
Q Consensus 196 l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 271 (548)
+.++.+--.+ ...-..+++.+++-. ....+.+..+...... +++.|+..+.++.. +
T Consensus 195 ly~~~~~~~~---~~ghT~LG~~l~~~~--------------~tc~~slical~lg~~---D~rAerilh~e~g~~Ge~p 254 (459)
T KOG4686|consen 195 LYDTMGRMFP---GVGHTLLGLWLCFEV--------------KTCKQSLICALSLGLS---DDRAERILHLEEGFLGEEP 254 (459)
T ss_pred HHHHHHHhcc---cchHHHHHHHHHHHH--------------HHHHHHHHHHHHhhhh---hhHHHHHHhhhcCcccCCc
Confidence 8776541111 111111111111000 0000000111111000 00223333332210 0
Q ss_pred ccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCC-CccchH--HHHHHHHHHHHHhhccCCCC-CCceecCcccchhhHHH
Q 008934 272 RLMPSENLRFLNKACMAKHPEQDLTPDGRASNP-NSLCTV--EQVEELKALIKASSMDRHVT-PNFEIPSGSFNIFAILT 347 (548)
Q Consensus 272 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~lg-~~~~i~~~~~~~~~~~~ 347 (548)
++...+ ....| |.+... .-.-.+...+. +...+. ..|++++..-.++++..
T Consensus 255 kLtdv~----------------------~f~ppfw~~~iicv~yyva~fPFi~---lg~~fF~~rfGlS~~~a~~i~s~v 309 (459)
T KOG4686|consen 255 KLTDVN----------------------TFYPPFWVLVIICVLYYVAWFPFIT---LGPMFFQKRFGLSAVSAGNILSTV 309 (459)
T ss_pred cccccc----------------------ccCccHHHHHHHHHHHHHHHHHHhh---hhHHHHHHhhCCChhhccchhhhh
Confidence 000000 01122 221110 00000000000 000000 13446666666666655
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHH
Q 008934 348 LTIWIGLYDRAVLPLASKIKGKPCQLSL-KLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLP 426 (548)
Q Consensus 348 ii~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~ 426 (548)
=.+..+ ..|+.+.+.+| .+. .+++..+.+...++=..+.+.. .+. -.
T Consensus 310 y~Isav-----~spvfg~i~Dk---~G~n~~wv~~a~~~tl~~H~~l~Ft~---------------------lsP---y~ 357 (459)
T KOG4686|consen 310 YGISAV-----LSPVFGAISDK---YGFNLWWVASACILTLLGHSGLFFTF---------------------LSP---YT 357 (459)
T ss_pred hhhhhh-----hhhhHHHhHhh---hcceehhHHHHHHHHHHHhhhHHhhh---------------------ccH---HH
Confidence 443333 44555555554 332 2334444444444333333321 122 23
Q ss_pred HHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHH
Q 008934 427 YLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYY 506 (548)
Q Consensus 427 ~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f 506 (548)
++.+.|+...+.....+-.+...+|+++-|++-|+.+..+++|-++-|.+.+.+.+-.+ +. ...+.+|
T Consensus 358 ~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-----~y-------~~le~ff 425 (459)
T KOG4686|consen 358 SMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-----SY-------DNLEAFF 425 (459)
T ss_pred HHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC-----ch-------hhHHHHH
Confidence 66788999999999899999999999999999999999999999999999998764211 11 1245566
Q ss_pred HHHHHHHHHHHHHHHHh
Q 008934 507 WLLTALSMANFLYYLAC 523 (548)
Q Consensus 507 ~~~~~~~~v~~~~~~~~ 523 (548)
...+.+++.+..+.+..
T Consensus 426 l~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 426 LIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHHHHHHHHHHHHhhe
Confidence 66666666665554443
No 159
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.16 E-value=6.6e-10 Score=118.60 Aligned_cols=177 Identities=15% Similarity=0.117 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.++......++.....+++..++|.|+++..|+++.+++++...+.+...++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 345555566666777789999999999999999999999999999999999999999999995 7554333333222221
Q ss_pred ---HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 98 ---MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 98 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
...+.... ..+.+...+..+..|.+..+..........|.+|++ .|+++
T Consensus 331 ~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~ 382 (438)
T TIGR00712 331 TIAVIVYWMNP---------------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK-------AAGTA 382 (438)
T ss_pred HHHHHHHHhcC---------------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh-------heeee
Confidence 11111110 012233333334444433222222234567888874 48999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 175 FSWYYVFVSASS-IVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 175 ~~~~~~~~~ig~-~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
.++.+...++|+ +++|.+.|++.++.||...|++.++..+++.+..++.
T Consensus 383 ~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 383 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred hhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 999988888875 6899999999999999999988777666665555443
No 160
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=1.7e-09 Score=113.14 Aligned_cols=174 Identities=13% Similarity=0.091 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
.+..+...++.....+....+++.|+.+.+|+++.+++.+.+...++..++.++.|+++||+ |+|+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 34444444444555555666778898888999999999999999999999999999999996 99999998888777776
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.+..... + +.+...+..++.+.|.....+.......+..++++ .++.+ ..
T Consensus 280 ~~~~~~~---------------------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~--~~ 329 (382)
T PRK10091 280 LMLFFFG---------------------G-MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGE------LLGAA--GG 329 (382)
T ss_pred HHHHHHH---------------------h-hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcch------HHHHH--HH
Confidence 5554322 0 23344444555556555444444433333333221 13433 33
Q ss_pred HHHHHHHHHHHHHHHHHhhhc-cCchhhhHHHHHHHHHHHHHHHhc
Q 008934 179 YVFVSASSIVAVTCIVYIQDN-LGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~~-~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+...++|..+||.++|++.|. .+|+..+.+.++..++.+......
T Consensus 330 ~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 330 QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence 556789999999999999985 689999998877666555544433
No 161
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.16 E-value=2.8e-08 Score=105.71 Aligned_cols=162 Identities=15% Similarity=0.088 Sum_probs=116.8
Q ss_pred HHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc--c--cchHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008934 39 NMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY--V--GRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPA 114 (548)
Q Consensus 39 ~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~--~--Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 114 (548)
-...|+++++|+++++...+.+..++-..+ -++.|.++|.+ . .||.-+.++.++..++...+...+ .
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~---~----- 81 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP---A----- 81 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc---c-----
Confidence 345578999999999988777666555544 57788999986 2 345555666666655555454432 1
Q ss_pred cccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 115 CDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIV 194 (548)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~ 194 (548)
...+.....+..++..+|....-...-+++.|...++.. .|+...++.+....+|++++..++|
T Consensus 82 -----------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~-----~~g~lqS~~~~~~~~G~lv~~~l~G 145 (433)
T PF03092_consen 82 -----------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE-----SRGDLQSFVWGVRSVGSLVGSLLSG 145 (433)
T ss_pred -----------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc-----hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 011334455566778899999888999999999876553 3788899999999999999999999
Q ss_pred HhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 195 YIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 195 ~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
.+.+..+++..|.+.+....+..+..+...+
T Consensus 146 ~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 146 PLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 9999999999999887766655444444333
No 162
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.15 E-value=2.2e-09 Score=112.64 Aligned_cols=176 Identities=16% Similarity=0.042 Sum_probs=126.8
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHH-HHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTA-ATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
..+..+...++...+......+.+.|+.+ +|+++++.|++...... ...++.+++|++.||+ |+||++.++..+..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 34555556667777777777888899875 79999999999887764 5667789999999996 999999887766533
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
............. ..+...+.....+.+++.|...+...+...+..++++ .+++.++
T Consensus 287 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~g~~~~ 343 (390)
T TIGR02718 287 LALLWFAQAAFWL-----------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD------QAGTDVT 343 (390)
T ss_pred HHHHHHHHHHccc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc------chHHHHH
Confidence 3222221110000 0022333444455566777777788888777776522 2799999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSAL 218 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 218 (548)
..+...++|..+||.++|++.+..||+..|.+.+++.+++.+
T Consensus 344 ~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 344 AVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887776665543
No 163
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.15 E-value=2.2e-09 Score=112.39 Aligned_cols=168 Identities=12% Similarity=0.032 Sum_probs=130.6
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++..+...++....+.....+++.|+. +.|+++.+.|.+.+...+...+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44555555566666777777788899985 6899999999999988888899999999999996 999999999888888
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+..++...+ +.+.+++..++.|++.+...+....++.+. +++ +++++++
T Consensus 283 ~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~ 331 (382)
T PRK11128 283 RWGLMGSTT-----------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGS-------EVIRLQA 331 (382)
T ss_pred HHHHHHhhh-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHh-------hhHHHHH
Confidence 776665543 667778888999999998888888887775 442 2577788
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHH
Q 008934 177 WYY-VFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSAL 218 (548)
Q Consensus 177 ~~~-~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 218 (548)
.+. ....+|..+||.++|++.|.+|+ ..|+..+++.+++++
T Consensus 332 ~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 332 LYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 775 44577889999999999999887 456655555544443
No 164
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.15 E-value=8.2e-10 Score=119.80 Aligned_cols=154 Identities=12% Similarity=0.001 Sum_probs=129.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+.......++..+.+++...++|.|+++.+|+|+.++|.......++..++.+++|++.||+ |+|+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4555666677777788888889999999999999999999999999999999999999999996 999999888888877
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+..++.... . ..+.+...+..++.|+|.|...+.....+.+..|+++ ++.+.+
T Consensus 338 ~~~~l~~~~-~-------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~-------~g~~~~ 390 (495)
T PRK14995 338 SFYGLAMTD-F-------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK-------AAAAGA 390 (495)
T ss_pred HHHHHHHhc-C-------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh-------cchHHH
Confidence 776655422 0 1134455667788999999998888888899888844 789999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 008934 177 WYYVFVSASSIVAVTCIVYIQD 198 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~ 198 (548)
+++...++|+.+|+.+.+.+.+
T Consensus 391 ~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 391 IETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865
No 165
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.14 E-value=4.4e-09 Score=110.90 Aligned_cols=172 Identities=10% Similarity=-0.069 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.++.......+.....+......|.|+.+++|+++.+.++......++..++.++.|+++||+ |+||.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344444444455555666667788999999999999999988888888889999999999996 9999999988887777
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..+........ ..+.+.+.++.++.++|.+...+......... ++++ |+++.+.
T Consensus 295 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~-------~g~~~~~ 348 (406)
T PRK15402 295 LLLAALATVIS------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS-------KGTVSAA 348 (406)
T ss_pred HHHHHHHHHcc------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc-------ccHHHHH
Confidence 77666532000 11455667778889999988777766655433 3322 7999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHH
Q 008934 178 YYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLS 216 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~ 216 (548)
.+....+|..+|+.+.+++.+..++.......++..++.
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999999999988777665444444433333
No 166
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.14 E-value=5.1e-10 Score=119.04 Aligned_cols=163 Identities=15% Similarity=0.103 Sum_probs=126.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++..+...++...+++....+.+.|++..+| ++.+.+++.....++..++.++.|+++||+ |||+++.++.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 455666667777777777766666777766666 566777888888999999999999999996 999999999888877
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.++..+.. .+.+...+..++.+++.+...+...++++|..|.++.+..++.++.+++
T Consensus 300 ~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 357 (437)
T TIGR00792 300 GYLIFFFAG----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYS 357 (437)
T ss_pred HHHHHHHcc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHH
Confidence 776665422 1345566667788899999999999999999875432211144789999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCch
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWK 203 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~ 203 (548)
+.+....+|..+++.+.|++.+..||.
T Consensus 358 ~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 358 VRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998877764
No 167
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=4.9e-09 Score=110.51 Aligned_cols=174 Identities=14% Similarity=0.163 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHH-HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWT-AATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~-~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
++..+...++...+......+.+.|+.+++|+++.+.+++..... ++..++.+++|++.||+ ||||.+.++.++..+.
T Consensus 211 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~ 289 (402)
T PRK11902 211 AWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 333344444444433333345566788889999999999886654 45788999999999996 9999988777766555
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHH----HHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFG----LMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
.+.+......+. +.+.+..... ..+++.+...+....++.+.+|. +
T Consensus 290 ~l~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~ 339 (402)
T PRK11902 290 NLGYWVLAVTPK-------------------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA-----------T 339 (402)
T ss_pred HHHHHHHHhcCC-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-----------H
Confidence 443322110111 3344444443 34555666666666777766664 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
.++.+....++|...++.++|++.|+.||+..|.+.+++.++++++....
T Consensus 340 ~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 340 QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 23444445577777667789999999999999999888777766555433
No 168
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.12 E-value=4.4e-08 Score=104.09 Aligned_cols=359 Identities=16% Similarity=0.111 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHhhH---HHHHHHHhHhhcCChhH-HHHHHHHH----HHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 22 IIANEAFERMATVGFT---PNMILYLCREYNMETTA-ATNIIFIW----TAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 22 ~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~-ag~i~~~~----~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
+....+...++++... .....+.....+.+... .+...... .+...+..++-|.++||| |||..+...++.
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~ 101 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHH
Confidence 3334555555555544 45555555444433322 22333333 678889999999999997 999999998887
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..+..+...+.. +++.+ ..-..-+.+...+...++++|...++ +|..
T Consensus 102 ~~l~~~~~~~~~-------------------------~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~-------~R~~ 148 (463)
T KOG2816|consen 102 TILPALCLLFQG-------------------------YWFFL-LLGLSGGFSAIFSVGFAYVADISSEE-------ERSS 148 (463)
T ss_pred HHHhHHHHHHHH-------------------------HHHhh-hcccccchhhhhhhhhhheeeccchh-------HHHH
Confidence 777665555422 23333 11122333455677788899998884 4899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceeccCCCC-CCchhHHHHHHHHHhhcc
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKSKANT-SLLPGLTQVLVASFKNRR 252 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 252 (548)
.+++.+.....+..++|.+++.+.+..|+..+|.++.+..+++.+-.....|+..+++..+ .+..+. ..
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~----------~~ 218 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL----------TP 218 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc----------CC
Confidence 9999999899999999999999999999999999999888877776666555543332221 010000 00
Q ss_pred CCCCCcchhhhhhcCCCCcccCCcch-hhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCC
Q 008934 253 TKLPTQATEEMYHHGKGSMRLMPSEN-LRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTP 331 (548)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 331 (548)
-........+.+..... ..+... +......+....++. ++. ... .....+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~---~~~~r~~l~l~l~~~~~~~~~~----~~~----------------~~~-~~~yl~~~f-- 272 (463)
T KOG2816|consen 219 GSLDSSHVADAFQSLTK---VGPDRLLLLLLLVAFLSSLPEA----GGA----------------SDV-LLLYLKAKF-- 272 (463)
T ss_pred Ccccchhhhhhhhhhcc---cCCCccchHHHHHHHHHHHHHh----cCc----------------eeE-EEEEEeeec--
Confidence 00000000001110000 000000 000000000000000 000 000 000111111
Q ss_pred CceecCcc---cchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008934 332 NFEIPSGS---FNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEG 408 (548)
Q Consensus 332 ~~~i~~~~---~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~ 408 (548)
+..... +....+....+ .+.+..|...+... ..+.+..|++...++..+.++.+
T Consensus 273 --~w~~~~~s~~~~~~~~~~~i----~~l~~~~~l~~~l~------~~~~i~lGl~~~~~~~~~~af~~----------- 329 (463)
T KOG2816|consen 273 --GWNKKEFSDLLSLVSILGII----SQLLLLPLLSSILG------EKRLISLGLLSEFLQLLLFAFAT----------- 329 (463)
T ss_pred --CcCHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHh------hhhHhhHHHHHHHHHHHHHHHhc-----------
Confidence 122211 22222222222 22234444444322 22478889999999999999886
Q ss_pred CCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008934 409 ISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITK 485 (548)
Q Consensus 409 ~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~ 485 (548)
..| +...............|...+++...++++.+|.++++......+++.+++.+-+.+...+.
T Consensus 330 -----------~~w-~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 330 -----------ETW-MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTL 394 (463)
T ss_pred -----------cch-hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 444 44455566667778899999999999999999999999999999999999999888765553
No 169
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.12 E-value=1.5e-09 Score=116.95 Aligned_cols=156 Identities=13% Similarity=0.061 Sum_probs=129.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++......++..+.+++...++|.|+++.+|+++.+++++.....++..++.++.|++.||+ |||+++.++..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4556666677778888889999999999999999999999999999999999999999999996 999999999888877
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+..+..... .+ +.+.+.+....++.|+|.+...+.......+.+|+ ++|+++.+
T Consensus 334 ~~~~~~~~~-~~------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~-------~~~g~~~~ 387 (485)
T TIGR00711 334 GFYWRAFTF-TP------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP-------HKIARGSS 387 (485)
T ss_pred HHHHHhccC-CC------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-------HHHhHHHH
Confidence 776665221 01 12445566667889999998887788888888887 44899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDN 199 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~ 199 (548)
+.+...++|+.+|+.+.+.+.++
T Consensus 388 ~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 388 LSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988764
No 170
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=2.5e-09 Score=108.69 Aligned_cols=162 Identities=11% Similarity=0.056 Sum_probs=125.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCRE--YNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (548)
|..+......++....-.++..+++.|+.+. +|+++.+++...+.+..+..++.+++++++||+ |+||++.++..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 4455555555555555667788999999854 799999999999999999999999999999996 9999999888877
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
+++..+....+ +. ....+..+.|++.+..+|...++..+.+|++. +.+
T Consensus 219 ~~~~~l~~~~~-----------------------~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~--------~~a 266 (310)
T TIGR01272 219 VLLSIGAALTH-----------------------GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHT--------SQG 266 (310)
T ss_pred HHHHHHHHHcC-----------------------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--------hhh
Confidence 77665554322 11 12335567899999999999999999888743 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHH
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVI 212 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~ 212 (548)
.++. ....+|++++|.+.|.+.|..|.+.+|++..++
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3443 567799999999999999999998888765543
No 171
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.9e-09 Score=103.68 Aligned_cols=165 Identities=15% Similarity=0.090 Sum_probs=134.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH-
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF- 92 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~- 92 (548)
.....+|.+..+.++...+.+=+...-+.|.++.+|+|+.+++.+.+.....+.+.+|+.|.++||+ |++-....+..
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACI 339 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHH
Confidence 3346788888888888888887778889999999999999999999999999999999999999997 99866555444
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
....+...+.++. +.-.++..++|+.+.....+.+++++..+|+++ .+
T Consensus 340 ~tl~~H~~l~Ft~-------------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~q-------LG 387 (459)
T KOG4686|consen 340 LTLLGHSGLFFTF-------------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ-------LG 387 (459)
T ss_pred HHHHHhhhHHhhh-------------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH-------hc
Confidence 4444555555533 334667788999999988889999999999955 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccC---chhhhHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLG---WKVGFGVPAV 211 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g---~~~~f~i~~~ 211 (548)
++++..+...|+|-.+.|++.|.+.|+-| |--+|.+...
T Consensus 388 Taygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~ 429 (459)
T KOG4686|consen 388 TAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIG 429 (459)
T ss_pred chHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHH
Confidence 99999999999999999999999998754 4455554433
No 172
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.11 E-value=3.7e-09 Score=112.06 Aligned_cols=146 Identities=14% Similarity=0.094 Sum_probs=106.5
Q ss_pred HHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 008934 32 ATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAK 111 (548)
Q Consensus 32 ~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~ 111 (548)
..+.+..++|.|+++ .|.++.+.+.+.+...++..++.+++|+++||+ |||+.+..+.++..++..+..... .
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~---~-- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP---Q-- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc---c--
Confidence 334467788989875 699999999999999999999999999999996 999999988877665544443221 0
Q ss_pred CCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 008934 112 PPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVT 191 (548)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~ 191 (548)
.....+....+..+.+..+..+..+.++.|.+|++ .|++++++.+...++|+.++|.
T Consensus 319 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 319 ----------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLE-------VRGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred ----------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHH-------HHhhhhhHHHHHHhHHHHHHHH
Confidence 01121222222222223333455667888999984 4899999999999999999999
Q ss_pred HHHHhhhccCchhhhH
Q 008934 192 CIVYIQDNLGWKVGFG 207 (548)
Q Consensus 192 i~~~l~~~~g~~~~f~ 207 (548)
+.|++.+++|+....+
T Consensus 376 ~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 376 AATWLGITMGLGAALT 391 (426)
T ss_pred HHHHHHHcccHHHHHH
Confidence 9999999888665433
No 173
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.11 E-value=1.8e-09 Score=114.40 Aligned_cols=164 Identities=12% Similarity=-0.017 Sum_probs=114.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhH-hhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHH-HHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCR-EYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMI-GFGCFTCL 95 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~-~~~~~~~~ 95 (548)
.++......++....++++..++|.|+++ ..|.++.+++.......++..++.+++|+++||+ +||+.. ....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 34556667777888899999999999987 3578899999999999999999999999999995 877753 33333333
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++..+. ... + +......+..+.+.|.....+.......+.+|+ ++|+.++
T Consensus 322 ~~~~~~-~~~--~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~a~ 371 (412)
T TIGR02332 322 AGWLLA-SAT--D--------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL-------QARAIAI 371 (412)
T ss_pred HHHHHH-Hhc--C--------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccch-------HHHHHHH
Confidence 332221 111 0 111112222223333333233334444566666 4599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVI 212 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~ 212 (548)
++.+...++|++++|.+.|.+.+..| |+..|++.++.
T Consensus 372 g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 372 AVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 99999999999999999999999875 99988876654
No 174
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.09 E-value=2.6e-09 Score=115.30 Aligned_cols=173 Identities=10% Similarity=0.035 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccch-----HHHH--HHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRY-----RMIG--FGC 91 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk-----~~~~--~~~ 91 (548)
+|.+.+..++.....+.+..++|.|+.+++|+++.+++.+.+...++..++.+++|+++||+ ||| |... ++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 34444444444445566777899999999999999999999999999999999999999995 875 2222 222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
++..+...+..... +.+...+..++.+++.+...+...++..+..| +.|
T Consensus 333 ~l~~i~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~ 381 (476)
T PLN00028 333 TLGGVFCIWLGRAN-----------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR--------RSL 381 (476)
T ss_pred HHHHHHHHHhcccc-----------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh--------hhc
Confidence 12111112221111 33334444455555555545555555555443 237
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcC
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
+...++.+...++|+.++|.+.+ ..+..+|+.+|++.+++.+++.++.++.+
T Consensus 382 g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 382 GVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 88888877777777777776543 22334699999998887777776665543
No 175
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.08 E-value=5.5e-09 Score=113.19 Aligned_cols=173 Identities=12% Similarity=0.064 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
....+...++..+....+...+|.+.++.+|.++...|++.+++.++..++.++.+++.+|+ ++++++..+.+.+.++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33344445555565556677889999999999999999999999999999999999999995 99999999998888888
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
+.++++. +.+...+..++.|.+........++.+.+..|++ .|+++++++
T Consensus 299 ~~lal~~-----------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~-------~~GRv~si~ 348 (524)
T PF05977_consen 299 LLLALSP-----------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW-------VRGRVFSIY 348 (524)
T ss_pred HHHhcch-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-------HHhHHHHHH
Confidence 8777755 6777888888899999988888899999999984 499999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 179 YVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
......+..+|..+.|.+.+.+|-+..+.++++..+++.++...
T Consensus 349 ~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 349 QMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887766666555443
No 176
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.08 E-value=3.9e-09 Score=110.98 Aligned_cols=172 Identities=10% Similarity=0.048 Sum_probs=126.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhh---cCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREY---NMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
|.++......++....+.......+.|+.+.+ +.+....+.+.++..+...++.++.|++.||+ |||+.+.++.++
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l 293 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTI 293 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 33444444444444444455567788887765 56677788888888899999999999999996 999999999888
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
..++..+...+. +.+.+++.+.+.+++..........+..+..+++. ++.
T Consensus 294 ~~l~~~~~~~~~-----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-------~at 343 (396)
T TIGR00882 294 MSVRIIGSSFAT-----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL-------SAT 343 (396)
T ss_pred HHHHHHHHHhcC-----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce-------EEE
Confidence 888776655433 55667777888888876655555556666666522 455
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHH
Q 008934 174 YFSW-YYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 174 ~~~~-~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 219 (548)
..+. ++...++|++++|.++|++.+..||+.+|.+.+++.++..++
T Consensus 344 ~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 344 IYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred eehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 5555 456789999999999999999999999999988776655544
No 177
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.07 E-value=3.8e-09 Score=109.21 Aligned_cols=157 Identities=10% Similarity=0.010 Sum_probs=118.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|..+.......+....++++..++|.|+++ +|+++.+++.+.+...++..++.++.|+++||+-+||+++.++.++..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 444555555566677888888999999874 7999999999999999999999999999999952456677777777777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+...+.... +.... ....+.|++.|...+...+.+.+..+++ ++++..++
T Consensus 276 ~~~~~~~~~-----------------------~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~------~~~g~~~~ 325 (355)
T TIGR00896 276 GLCGLLFAP-----------------------MHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQA------AQAAALSA 325 (355)
T ss_pred HHHHHHHhh-----------------------hhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCH------HHHHHHHH
Confidence 766555432 11111 1346778999998888877777665543 23688888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccC-chh
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLG-WKV 204 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g-~~~ 204 (548)
+.+...++|..++|.+.|++.|+.| |.+
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 8888889999999999999999876 443
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.07 E-value=3e-09 Score=110.01 Aligned_cols=162 Identities=15% Similarity=0.171 Sum_probs=117.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH-HH-HH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFG-CF-TC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~-~~-~~ 94 (548)
|.++.+....++.....+++..+++.|+++.+|+++.+++.+.+...++..++.++.|+++||+.+||+..... .. ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 34555666667777777888899999999999999999999999999999999999999999842333332221 11 11
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++....... + ..+.....+..++.|.......+....+..|.+|+++ |+++
T Consensus 296 ~~~~~~~~~~---~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~g~~ 347 (379)
T TIGR00881 296 IVSLLVYWLN---P------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA-------AGTA 347 (379)
T ss_pred HHHHHHHhcC---c------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch-------hHHH
Confidence 1121111110 0 0133444455556665555555666778899998844 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhh
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGF 206 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f 206 (548)
+++.+...++|..++|.+.|++.+++||+..|
T Consensus 348 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 348 AGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999998765
No 179
>TIGR00895 2A0115 benzoate transport.
Probab=99.07 E-value=3.5e-09 Score=110.36 Aligned_cols=147 Identities=12% Similarity=-0.020 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
..+...+..++....++.+..++| |+.+++|+++.+++.+.....++..++.+++|+++||+ |||+......+.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 344455566677777888888888 66788999999999999999999999999999999996 9985544433333322
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..+..... +.+...+..++.|++.+...+...+++.|.+|+ ++|++++++
T Consensus 329 ~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~ 378 (398)
T TIGR00895 329 VLVGSTLF-----------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPT-------AIRATGVGW 378 (398)
T ss_pred HHHHHHhh-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCH-------HHHHHHHHH
Confidence 22222111 445566777888999999999999999999998 449999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 008934 178 YYVFVSASSIVAVTCIVYI 196 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l 196 (548)
.+...++|..+||.++|++
T Consensus 379 ~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 379 AIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999875
No 180
>PRK10054 putative transporter; Provisional
Probab=99.06 E-value=3.4e-09 Score=111.58 Aligned_cols=174 Identities=11% Similarity=0.077 Sum_probs=131.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhH--hhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCR--EYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~ 94 (548)
|.++......++..+.+.......+.|+.. +.+.+....+.+.....+......++.|++.||+ ++|+.+..+.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 455555566666666666666677777754 4566677778888888777777888999999996 9999999998888
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++........ .+.+...++..+.++|.+...|...+++.+..|++. |+++
T Consensus 285 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~-------~~~~ 335 (395)
T PRK10054 285 VIGLVGFIFSG----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM-------KASY 335 (395)
T ss_pred HHHHHHHHHcc----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc-------ceeh
Confidence 77776665422 144556667888999998888898999999998854 6777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHH
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFF 221 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 221 (548)
++... ...+|..+||.++|++.|+.|....|.+.+....++.+...
T Consensus 336 ~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 336 FSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 77643 56799999999999999999988888877666555555444
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.06 E-value=1.6e-08 Score=106.44 Aligned_cols=168 Identities=10% Similarity=-0.002 Sum_probs=121.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++..+...++.....++...++++++.+++|+++.+++.+...+.++..++.++.|++.||. ++ +.+..+..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~-~~l~~~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VK-LALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch-hHHHHHHHHHHH
Confidence 3345544455555566666666765555678899999999999999999999999999999994 54 444444444333
Q ss_pred H-HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 97 G-MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 97 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
. ..+....+ +.+.+.+..++.|++.+...+..++++.+..|++ +++..
T Consensus 294 ~~~~l~~~~~-----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 342 (394)
T PRK10213 294 SALVLTLWGS-----------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ--------AEKAG 342 (394)
T ss_pred HHHHHHHHhh-----------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc--------HHHHH
Confidence 3 33333322 4566677788889999999998998888888742 34556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSA 217 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~ 217 (548)
+......++|..+||.++|++.|..|++..+...+++.++..
T Consensus 343 ~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 343 SIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 666677799999999999999999999888888766544333
No 182
>PRK09848 glucuronide transporter; Provisional
Probab=99.05 E-value=1.8e-09 Score=115.62 Aligned_cols=164 Identities=13% Similarity=0.120 Sum_probs=129.1
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+.......++...+++......+.|+++.+|.++...++......++..++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 5566666677777777777777888888888998887766655555677888999999999996 999999999988888
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.++..+.. ..+.+.+.+..++.++|.+...+...++.+|..|+++.+..++.++..++
T Consensus 307 ~~~~~~~~~---------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 307 GYLLFFWVS---------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHHHcC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 776665432 12456667778889999999999999999999987653222244688899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCc
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGW 202 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~ 202 (548)
.+.....+|..+|+.+.+.+.+..||
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999988776665
No 183
>PRK10133 L-fucose transporter; Provisional
Probab=99.04 E-value=7.2e-09 Score=110.61 Aligned_cols=167 Identities=11% Similarity=0.034 Sum_probs=125.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHH-hHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYL-CREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
|.++...+..++...+.++...+++.|+ ++.+|+++.++++....+.++..++.+++|++.||+ ||||++..+.++..
T Consensus 258 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~ 336 (438)
T PRK10133 258 RHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAM 336 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHH
Confidence 3344455556666677777778889896 567999999999999999999999999999999996 99999998877766
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
++..+..+.. +. ..+....+.|+|.+...|+..+...+.+|++. +.+.
T Consensus 337 ~~~~~~~~~~-----------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~--------~~as 384 (438)
T PRK10133 337 ALCLISAFAG-----------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT--------KYGS 384 (438)
T ss_pred HHHHHHHHcC-----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh--------ccch
Confidence 6555444322 11 22455678899999999999999999987643 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSA 217 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~ 217 (548)
++.. ...+|+.++|.+.|++.+..| -+..|++..+..+..+
T Consensus 385 ~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 385 SFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred hHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4333 344688889999999999887 7888887666544333
No 184
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.03 E-value=1.6e-08 Score=106.33 Aligned_cols=163 Identities=11% Similarity=-0.023 Sum_probs=122.9
Q ss_pred HHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhccc
Q 008934 28 FERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTIL 107 (548)
Q Consensus 28 ~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~ 107 (548)
+...........++.|+++.+|.++.++|.+.....++..++.++.+++.||+ ++++++..+.. ..+...++...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~-- 291 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH-- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh--
Confidence 33445556667778899999999999999999999999999999999999996 99988887753 333333333322
Q ss_pred CCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHH
Q 008934 108 PGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSI 187 (548)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 187 (548)
+.+...+..++.|++.+...+..++.+.+..|++. .+++++++.+...++|..
T Consensus 292 ---------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~------~~g~~~a~~~~~~~~~~~ 344 (393)
T PRK11195 292 ---------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV------GAGHSIAVQNFNENLAML 344 (393)
T ss_pred ---------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc------cchhHHHHHhHHHHHHHH
Confidence 45556667778899999988888888877644422 268999999999999999
Q ss_pred HHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 188 VAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 188 ~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
++..+.+.+ +.+|-+..+++.+...++.....+.
T Consensus 345 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK11195 345 LMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALL 378 (393)
T ss_pred HHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999988866 5678777777766655555444433
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.02 E-value=1e-08 Score=110.17 Aligned_cols=177 Identities=12% Similarity=-0.031 Sum_probs=122.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHH--------HH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRM--------IG 88 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~--------~~ 88 (548)
+.++......++....++....++|.|+++.+|++..++++..+...++..++.+++|+++||+ ++|+. +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 4567777788888899999999999999999999999999999999999999999999999985 54421 11
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccc
Q 008934 89 FGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSK 168 (548)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (548)
.+......+..++.... .. .+....++...+.+.+.+...+.......|..|+
T Consensus 340 ~~~~~~~~~~~~~~~~~-~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------- 392 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPY-LS-------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR------- 392 (465)
T ss_pred HHHHHHHHHHHHHHHHH-cC-------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-------
Confidence 11111111111111111 00 1233334444444555555555555555555543
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CchhhhHHHHHHHHHHHHHHHh
Q 008934 169 GALQSYFSWYYVFVSASSIVAVTCIVYIQDNL---GWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 169 ~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~---g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
.++.+.++.+...++|+.++|.+.|++.+.. +|..+|.+.++..+++.++...
T Consensus 393 -~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 -FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 3899999999999999999999999887653 3888898888777776655443
No 186
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=2.1e-08 Score=108.06 Aligned_cols=162 Identities=9% Similarity=-0.003 Sum_probs=114.6
Q ss_pred hhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008934 35 GFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPA 114 (548)
Q Consensus 35 ~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 114 (548)
.+..+.|.+ .+++|++....++......+...++.+++|+++||+ |||+++..+.++.+++.+++..... ..
T Consensus 289 ~~~~~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-~~----- 360 (479)
T PRK10077 289 VVLYYAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-TQ----- 360 (479)
T ss_pred HHHHHHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-cC-----
Confidence 333444544 457899988888888888888999999999999996 9999999999988888777664320 00
Q ss_pred cccccCCCcCCCccchHHHHHHHHHHHHhccc-cccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 115 CDQLRNGCESATWSQLMPLYFAFGLMSLGSGG-IRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCI 193 (548)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~ 193 (548)
. ..........+.+.+.+. ..|+.+++++|.+|+ ++|++++++.+...++|.++++.+.
T Consensus 361 ------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 361 ------------A-PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPN-------AIRGKALAIAVAAQWIANYFVSWTF 420 (479)
T ss_pred ------------c-ccHHHHHHHHHHHHHHhccccchhHHHhHhhCCh-------hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 112223333444444443 246778999999997 4499999999998888888886555
Q ss_pred H------HhhhccCchhhhHHHHHHHHHHHHHHHhcC
Q 008934 194 V------YIQDNLGWKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 194 ~------~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
+ ++.+..+|+..|++.++..+++.+..+...
T Consensus 421 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (479)
T PRK10077 421 PMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFV 457 (479)
T ss_pred HHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcc
Confidence 4 344677888889887776666655544433
No 187
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.02 E-value=2.7e-08 Score=101.14 Aligned_cols=82 Identities=10% Similarity=-0.084 Sum_probs=69.2
Q ss_pred chHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc---------
Q 008934 129 QLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN--------- 199 (548)
Q Consensus 129 ~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~--------- 199 (548)
++..++++.+++|.|.+...++.++++++..|+++ +++.+++......+|..+||.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~-------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIET-------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch-------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 67889999999999999999999999999998854 78899999999999999999999987731
Q ss_pred -------cCchhhhHHHHHHHHHHH
Q 008934 200 -------LGWKVGFGVPAVIMLLSA 217 (548)
Q Consensus 200 -------~g~~~~f~i~~~~~~i~~ 217 (548)
.+|++++++.+.+.++..
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~ 106 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLA 106 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 368889886655444333
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.02 E-value=8.6e-09 Score=108.69 Aligned_cols=154 Identities=13% Similarity=0.035 Sum_probs=112.9
Q ss_pred hhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCC
Q 008934 35 GFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPA 114 (548)
Q Consensus 35 ~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 114 (548)
....++|.|+++..+ ++.+.+++.....+.........+++.||+++.++.+..+.++..++..++...+
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 345678888876655 7788888888877766655555566666544767777778777777776666544
Q ss_pred cccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 115 CDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIV 194 (548)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~ 194 (548)
+.+.+.+...+.++|.+...|...+++.+..|+++ |++++++++...++|..+||.++|
T Consensus 296 --------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~-------~g~~~g~~~~~~~~g~~ig~~l~G 354 (400)
T PRK11646 296 --------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA-------RGSYMGFSRLGLALGGAIGYIGGG 354 (400)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc-------chhhhhHHHHHHHHHHHhcccchH
Confidence 44556666677888888888999999999999855 899999999999999999999999
Q ss_pred Hhhhcc---C-chhhhHHHHHHHHHHHHH
Q 008934 195 YIQDNL---G-WKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 195 ~l~~~~---g-~~~~f~i~~~~~~i~~~~ 219 (548)
++.|+. + ...++.+.++..+++.+.
T Consensus 355 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 355 WLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 998864 2 345555545544444433
No 189
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.01 E-value=1.7e-08 Score=107.06 Aligned_cols=187 Identities=12% Similarity=0.098 Sum_probs=128.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+.+|.+.+..++..-+|.+...++|.|+++++ +...+........+...+..|++|+|+||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 55777777777777777778889999998866 344444444556788889999999999996 999999999887766
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCC----------C-
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDG----------T- 165 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~----------~- 165 (548)
+........ |. .+..+.+.+.+....+.++.|.-..++..++.+.+|+++. .
T Consensus 329 ~~~~~~l~l--p~---------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~ 391 (462)
T PRK15034 329 FSALLFLTL--PG---------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQ 391 (462)
T ss_pred HHHHHHHHh--cc---------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhH
Confidence 654433321 21 0112456666666666666677667777788887874100 0
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CchhhhHHHHHHHHHHHHHHHhc
Q 008934 166 ---KSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL-GWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 166 ---~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~-g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+.+++-+.+.|+......+|+.+-|.+.|...+.. ++...|+...+..+++..+.+..
T Consensus 392 ~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 392 AQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 00124567777888888898889998877777665 48888888877776666655443
No 190
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.01 E-value=1e-08 Score=109.15 Aligned_cols=164 Identities=16% Similarity=0.188 Sum_probs=140.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.....++..++..+++.......+.|.+..+|.+ ...+.+..+..+...++.++.++++||+ |+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 66777788888888998888889999999888888 5567788889999999999999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.++..+.. ..+.+.+++..++.|++.+...+...++++|..+.++.+.+++..+..++
T Consensus 303 ~~~~~~~~~---------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 303 GFLLLFFLG---------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHH---------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 888877654 12678888889999999999999999999999997765444455788899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCch
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWK 203 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~ 203 (548)
.+.....+|.++++.+.+.+.+..||.
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 999999999999999999888766654
No 191
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.97 E-value=1.2e-08 Score=104.33 Aligned_cols=173 Identities=16% Similarity=0.191 Sum_probs=142.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+.+-+...++.+=+.-++..+...|-..++|++.++...+....++...++.+++|+|.||+ |.|+++.++++++.+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3555556677777777788889999999999999999999999999999999999999999995 999999999998888
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
..+...+.. ....+.+.-.+.|...|..++..-++.++.+|+++ -++.|+
T Consensus 331 ~~~~~~~~~-----------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k-------~~~fFg 380 (438)
T COG2270 331 AALYLIFLE-----------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK-------EGRFFG 380 (438)
T ss_pred HHHHHHHcc-----------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc-------ccceee
Confidence 776666543 23345555567899999999999999999999976 478999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~ 220 (548)
++......++.+||.+.+.+.+..| -|..+....++.+++++++
T Consensus 381 lyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 381 LYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 9999999999999999999988665 6666665555555555443
No 192
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.97 E-value=4.2e-08 Score=102.07 Aligned_cols=160 Identities=13% Similarity=0.119 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
.+.......+....++....+.|.|+++++|+++.+++.+.....++..++.++.|++.||+ |||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444445555666777778889999999999999999999999999999999999999996 99999998888777776
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
.++......+ ......+....++.|+|.+...+.......|..|+ + |+++.++.
T Consensus 287 ~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-------~g~~~~~~ 340 (385)
T TIGR00710 287 VLLEITAILG------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-V-------AGTASALF 340 (385)
T ss_pred HHHHHHHHhc------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-c-------chHHHHHH
Confidence 6665432000 01234455556778888888888888888887763 2 68888888
Q ss_pred HHHHHH-HHHHHHHHHHHhhhccCchhhh
Q 008934 179 YVFVSA-SSIVAVTCIVYIQDNLGWKVGF 206 (548)
Q Consensus 179 ~~~~~i-g~~~gp~i~~~l~~~~g~~~~f 206 (548)
+..... |++.+| +.+.+.+..+|...+
T Consensus 341 ~~~~~~~g~i~~~-~~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 341 GTLRLVLGAIVGY-LVSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHH-HHHhccccChHHHHH
Confidence 777654 555555 455554443444333
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=1.7e-08 Score=120.63 Aligned_cols=164 Identities=12% Similarity=0.082 Sum_probs=130.3
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChh-HHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETT-AATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~-~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
.++..++..++.....+.+..+++.|+++.+|++.. +++++.+...++..++.++.|+++||+ ++++++.++.++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444455555566667778899999999999999 999999999999999999999999996 999999888887777
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.+++.... +.+.+++..++.|++.++..+...+++.+..|++. |+++++
T Consensus 312 ~~~~~~~~~-----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------rg~~~~ 361 (1146)
T PRK08633 312 SLFLLPTAP-----------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE-------LGKVLA 361 (1146)
T ss_pred HHHHHHHhh-----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc-------hhhhhH
Confidence 776666543 55667777888999999988999999999998854 899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc-cCchhhhHHHHHH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDN-LGWKVGFGVPAVI 212 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~-~g~~~~f~i~~~~ 212 (548)
+.+...++|.++++.+++.+... +++...|++.+.+
T Consensus 362 ~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 362 ANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999998888877766542 3455555554443
No 194
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.96 E-value=1.4e-08 Score=110.49 Aligned_cols=167 Identities=17% Similarity=0.054 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHH------------HHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATN------------IIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~------------i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
..++..+.+|++..++|.+++ +.|+++.+++. ...+..++..++.+++++++||+ |||++++++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 344556788899888888885 78887653321 12233445556788999999996 99999988887
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..++..+..+... . . . +...+....+....+..+..+....+.+|.+|++ .|+
T Consensus 374 ~~~~~~~~l~~~~~-~----------------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~-------~R~ 427 (502)
T TIGR00887 374 ILTVLFFVLGFAYN-H----------------L-S-THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTR-------YRS 427 (502)
T ss_pred HHHHHHHHHHHHHH-h----------------c-c-hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchh-------HHH
Confidence 77766655554320 0 0 0 1111111111122222233456667789999994 499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc----------cCchhhhHHHHHHHHHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDN----------LGWKVGFGVPAVIMLLSALS 219 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~----------~g~~~~f~i~~~~~~i~~~~ 219 (548)
++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 428 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 428 TAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998873 34455677776666555443
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.93 E-value=1.7e-08 Score=120.49 Aligned_cols=180 Identities=8% Similarity=-0.035 Sum_probs=133.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++..++..++..+.++++..++|.|+++.+|.++.+++++.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4556666666677777788888999999999999999999999999999999999999999986 777766666665555
Q ss_pred HHHHHHHhc--ccC-C--CCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 97 GMVLLWSTT--ILP-G--AKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 97 ~~~l~~~~~--~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
+.+.+.+.. ..+ . +..- .......+.+.++++.++.|++.+...+...+++.+.+|++. |
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-------~ 368 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSI--------LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH-------R 368 (1140)
T ss_pred HHHHHHhcccccccccccccch--------hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc-------c
Confidence 444443320 000 0 0000 000000245667788888999999999999999999999855 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-ccCchhhhHHHHHH
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQD-NLGWKVGFGVPAVI 212 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~-~~g~~~~f~i~~~~ 212 (548)
+++++..+...++|..+++.+.+.+.+ ..++...|++.+.+
T Consensus 369 G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 369 ARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999999999998874 34666666554443
No 196
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.87 E-value=3.4e-08 Score=102.07 Aligned_cols=144 Identities=9% Similarity=0.019 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHH-HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWT-AATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~-~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.+..++..++..++++....+++.|+++ +|+++.+.+.+..+.. +...++.+++|+++||+ ||||.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5556666777788899999999999987 9999999998887766 56789999999999996 9999999888877776
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..+.....+... ++ + .+..+.+.+....++.+++.+...+...++..+.+|++. |++.+++
T Consensus 289 ~~~~~~~~~~~~----------~~-~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~-------~g~~~g~ 349 (356)
T TIGR00901 289 NAGFVWLASNGH----------HD-G-ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF-------GATQMAL 349 (356)
T ss_pred HHHHHHHHhcCc----------cc-c-cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc-------cHHHHHH
Confidence 655443210000 00 0 000134667777888899999999999999999999955 8999999
Q ss_pred HHHHHH
Q 008934 178 YYVFVS 183 (548)
Q Consensus 178 ~~~~~~ 183 (548)
++...+
T Consensus 350 ~~~~~~ 355 (356)
T TIGR00901 350 LSSLSA 355 (356)
T ss_pred HHHHHh
Confidence 776654
No 197
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.86 E-value=9.7e-08 Score=99.50 Aligned_cols=166 Identities=13% Similarity=-0.033 Sum_probs=113.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccch---HHHHH-HHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRY---RMIGF-GCF 92 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk---~~~~~-~~~ 92 (548)
|.++.+....++....+|++..++|.|++ +.|++.. ++.......+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 55677878899999999999999999996 5788865 565555555544444 57888874 543 33232 333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+..+......... +.........+.+.+.....+..+++.+|.+|++. |+
T Consensus 266 ~~a~~~~~~~~~~-----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~-------rg 315 (368)
T TIGR00903 266 LIAAFFLALAFEL-----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL-------HG 315 (368)
T ss_pred HHHHHHHHHHHcc-----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh-------cC
Confidence 3333333333222 22233334455566666667778899999999944 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHH
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 220 (548)
++.++.+...++|++.+|.+.+.+.. |.+..|.+.++..+++.+..
T Consensus 316 t~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 316 KAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887773 66777877776666655554
No 198
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.86 E-value=2.6e-07 Score=101.34 Aligned_cols=206 Identities=17% Similarity=0.285 Sum_probs=153.8
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
.|.+..++....+....+.+.......-+.+.++++.++.|++.+.+-++..+...+..|.+-|. -|-|.+-+|.++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMG 173 (735)
T ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHH
Confidence 36666666666666666668888888889999999999999999999999999999999999995 88899999999999
Q ss_pred HHHHHHHHhcccCCCCC--------C-Ccc----------cccC-------CCc---CCCccchHHHHHHHHHHHHhccc
Q 008934 96 LGMVLLWSTTILPGAKP--------P-ACD----------QLRN-------GCE---SATWSQLMPLYFAFGLMSLGSGG 146 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~--------~-~~~----------~~~~-------~~~---~~~~~~~~~~~i~~~l~g~g~g~ 146 (548)
++.++.++-+++..-+. . ++. +... .++ ..+..-+..++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 99999885332211000 0 001 0000 111 11212234678889999999999
Q ss_pred cccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc------------------cC-chhhhH
Q 008934 147 IRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN------------------LG-WKVGFG 207 (548)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~------------------~g-~~~~f~ 207 (548)
.++.-.+++=|-..+++ ....+++.+.+..+|.++|.++++.+.+. .| |+..|+
T Consensus 254 i~tlGisYiDDnvk~~~-------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKN-------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred CccCCCccccccccccC-------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 99988888877776643 68899999999999999999999886531 13 889999
Q ss_pred HHHHHHHHHHHHHHhcCCceec
Q 008934 208 VPAVIMLLSALSFFLASPFYVK 229 (548)
Q Consensus 208 i~~~~~~i~~~~~~~~~~~~~~ 229 (548)
+++.+.++..+-++...++.++
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCcc
Confidence 9999888887777666655543
No 199
>PRK09669 putative symporter YagG; Provisional
Probab=98.86 E-value=3.7e-08 Score=105.35 Aligned_cols=164 Identities=10% Similarity=0.042 Sum_probs=112.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++.++...++...+........+.|.+..++ ++...+.+.....+...++.+++++++||+ |+|+.+..+.+...+
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVI 306 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 344444445555545544333444444333333 333444556666777888889999999996 999999988776655
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.....+.. ..+.+.+++..++.|++.+...+...++++|..+.++.+..++..+..++
T Consensus 307 ~~~~~~~~~---------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s 365 (444)
T PRK09669 307 LSALIFFIP---------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFS 365 (444)
T ss_pred HHHHHHHhC---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHH
Confidence 433332211 11556677777889999999999999999999985543332244567788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCch
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWK 203 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~ 203 (548)
.......+|.++|+.++|++.+..||.
T Consensus 366 ~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 366 TNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 888899999999999999998877773
No 200
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.85 E-value=3e-08 Score=106.99 Aligned_cols=176 Identities=15% Similarity=0.134 Sum_probs=148.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc--hHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGR--YRMIGFGCFTC 94 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Gr--k~~~~~~~~~~ 94 (548)
+.++.......+..++++.-..+++.|.. .+|++..++..+.++..+...++.++.|+++|+. .. +.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 66777777888899999999999999977 9999999999999999999999999999999996 63 34455555555
Q ss_pred HHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHH
Q 008934 95 LLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSY 174 (548)
Q Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 174 (548)
.++...+++.. +.+.++..-.+.|++.|...+.....+.|..+.++ ...+
T Consensus 376 gl~~~~~p~~~-----------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~-------l~~a 425 (509)
T KOG2504|consen 376 GLARLFLPFAT-----------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK-------LSNA 425 (509)
T ss_pred HHHHHHHHHhc-----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh-------cchH
Confidence 55655555544 56778888888999999988888889999999855 8899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC-chhhhHHHHHHHHHHHHHHHhcC
Q 008934 175 FSWYYVFVSASSIVAVTCIVYIQDNLG-WKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 175 ~~~~~~~~~ig~~~gp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
+++......++..+||++.|++.|..| |...|+.+++..+++..+.++..
T Consensus 426 ~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 426 YGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999999887 99999999998888876655544
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.85 E-value=2e-07 Score=97.80 Aligned_cols=145 Identities=7% Similarity=-0.012 Sum_probs=95.4
Q ss_pred HHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCC
Q 008934 31 MATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGA 110 (548)
Q Consensus 31 ~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~ 110 (548)
........+.+.|+++++|+++.+.+.+.....++..++.++.|++.||+ |||+++.++..+..++..+..+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~----- 290 (392)
T PRK10473 217 TVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP----- 290 (392)
T ss_pred HHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 33344455667788889999999999999999999999999999999996 999999999888888777766543
Q ss_pred CCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHH
Q 008934 111 KPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAV 190 (548)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp 190 (548)
+.........+.+.|.+...+... ..+..|.++ |+ +..+....++..+|+
T Consensus 291 ------------------~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~-------~~---g~~~~~~~~~~~~g~ 340 (392)
T PRK10473 291 ------------------SHAVSLFGITLICAGFSVGFGVAM--SQALGPFSL-------RA---GVASSTLGIAQVCGS 340 (392)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHhHHHH--HHHhccCcc-------cc---cHHHHHHHHHHHHHH
Confidence 222333333444444443333322 233334322 22 222233456777777
Q ss_pred HHHHHhhhccCchhhhHHHHH
Q 008934 191 TCIVYIQDNLGWKVGFGVPAV 211 (548)
Q Consensus 191 ~i~~~l~~~~g~~~~f~i~~~ 211 (548)
.+++++.++.|+.....+.+.
T Consensus 341 ~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 341 SLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHHHHHhccchhHHHHHH
Confidence 777788777777654444444
No 202
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.84 E-value=2e-07 Score=96.98 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGM 98 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~ 98 (548)
.+..+....+...+.+....+.+.|+.+++|+++.+++.+.....++..++.+++|+++||+ ||||++.++..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 34444444455555666667778888888999999999999999999999999999999996 99999998887654433
Q ss_pred HHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 99 VLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 99 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
+........+ .+.+...++..+.+.+.+...+.....+.|..|+ + ++++.+..
T Consensus 275 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~g~~~~~~ 327 (377)
T PRK11102 275 IWLVVSALLD-------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-M-------AGTASSLA 327 (377)
T ss_pred HHHHHHHHHh-------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-c-------chHHHHHH
Confidence 2222211000 1334444444455555555555666666666653 2 67777776
Q ss_pred HHHH-HHHHHHHHHHHH
Q 008934 179 YVFV-SASSIVAVTCIV 194 (548)
Q Consensus 179 ~~~~-~ig~~~gp~i~~ 194 (548)
.... .+|+.+++.+++
T Consensus 328 ~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 328 GTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 5543 567777776544
No 203
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.82 E-value=4.2e-06 Score=84.57 Aligned_cols=155 Identities=16% Similarity=0.116 Sum_probs=110.0
Q ss_pred hHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcC
Q 008934 45 CREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCES 124 (548)
Q Consensus 45 ~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 124 (548)
.+++|+++.+.+.+.......+.+..++.|.++||+ ||||.-++.++++.+..+.- ..+
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k-~~~------------------- 119 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTK-HSS------------------- 119 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHH-hcc-------------------
Confidence 368999999999999999999999999999999996 99999999998888876533 222
Q ss_pred CCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccC--
Q 008934 125 ATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYY-VFVSASSIVAVTCIVYIQDNLG-- 201 (548)
Q Consensus 125 ~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~~gp~i~~~l~~~~g-- 201 (548)
+...++++|++-|+++....++--+.....-.+++- . ++..+.-++... ..+.+-++.+..++-++.+..+
T Consensus 120 ----~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~-~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g 193 (354)
T PF05631_consen 120 ----NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGF-P-QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFG 193 (354)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCC
Confidence 688899999999999999888877665443322210 0 022444444333 2233344444445556666554
Q ss_pred chhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 202 WKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 202 ~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
...+|..+.++.+++.++....+++
T Consensus 194 ~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 194 PVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred CcchHHHHHHHHHHHHHHHHhcccc
Confidence 4789998888777777666554444
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=98.82 E-value=6e-08 Score=105.34 Aligned_cols=142 Identities=12% Similarity=0.002 Sum_probs=102.1
Q ss_pred HhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCC
Q 008934 46 REYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESA 125 (548)
Q Consensus 46 ~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (548)
..++.+.. +......+....+.+++++++||+ |||+++.++.++..++.+++.... .
T Consensus 351 ~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~---~---------------- 407 (505)
T TIGR00898 351 GNLGGNIY---LDLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP---V---------------- 407 (505)
T ss_pred cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC---C----------------
Confidence 34555543 333345566778889999999996 999999999888777776666533 1
Q ss_pred CccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhh
Q 008934 126 TWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVG 205 (548)
Q Consensus 126 ~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~ 205 (548)
...+...+..++.+.+.+...+..+.+.+|.+|+ +.|++++++.+....+|++++|.+.+ +. ..++..+
T Consensus 408 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~ 476 (505)
T TIGR00898 408 --DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT-------VVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLP 476 (505)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH-------HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhH
Confidence 1123344444555666777778888999999998 44899999999999999999999988 43 4566777
Q ss_pred hHHHHHHHHHHHHHHH
Q 008934 206 FGVPAVIMLLSALSFF 221 (548)
Q Consensus 206 f~i~~~~~~i~~~~~~ 221 (548)
+.+.++..+++.+..+
T Consensus 477 ~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 477 LVLFGGLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777766665555443
No 205
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.79 E-value=6.4e-08 Score=99.11 Aligned_cols=141 Identities=18% Similarity=0.173 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 008934 22 IIANEAFERMATVGFTPNMILYLCREYNME-TTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVL 100 (548)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l 100 (548)
.+...++..+.++....+++.|+.+++|++ ..+++.+.....+...++.++.|+++||+ |+|+...+......++...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~ 289 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALG 289 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHH
Confidence 455556666788889999999999999999 89999999999999999999999999995 9988888777776666655
Q ss_pred HHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHH
Q 008934 101 LWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYV 180 (548)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 180 (548)
+..... ..+....++..++.|++.+...+...+++.|.+|++ +|+++.++.+.
T Consensus 290 ~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~g~~~g~~~~ 342 (352)
T PF07690_consen 290 LLLLPF--------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPE-------YRGTAFGLFNS 342 (352)
T ss_dssp HCCSHH--------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTC-------HHHHHHHHHHH
T ss_pred HHHHHH--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-------HHHHHHHHHHH
Confidence 554330 114456666788899999999999999999999984 49999999999
Q ss_pred HHHHHHHHHH
Q 008934 181 FVSASSIVAV 190 (548)
Q Consensus 181 ~~~ig~~~gp 190 (548)
..++|..+||
T Consensus 343 ~~~~~~~igP 352 (352)
T PF07690_consen 343 IGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHCC
Confidence 9999999987
No 206
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.78 E-value=3.5e-07 Score=91.78 Aligned_cols=168 Identities=15% Similarity=0.096 Sum_probs=134.5
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+..|.+..-.=+.++.+|.+..++|.++. +.|+|+.++|+..+...+......+..-.+++|...+|+.......++.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44566666566789999999999999976 88999999999999999999999999999999876777888878888888
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
|...+.+.+ . +.+.+- .+++|+|.|+.+|....++.+..++.+. -++..+
T Consensus 287 G~~G~~~~P---~-------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~------Aa~LSg 336 (395)
T COG2807 287 GLVGLLLAP---G-------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAI------AAALSG 336 (395)
T ss_pred HHHHHHHhh---h-------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHH------HHHHHH
Confidence 887777644 1 222222 4789999999999999999999887543 667777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-CchhhhHHHHHHHHH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNL-GWKVGFGVPAVIMLL 215 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~-g~~~~f~i~~~~~~i 215 (548)
+.+....+=+++||.+.|++.|.. +|+.+....+...++
T Consensus 337 maQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~ 376 (395)
T COG2807 337 MAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLL 376 (395)
T ss_pred HhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHH
Confidence 777777888889999999999976 488777665554443
No 207
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.78 E-value=8.3e-10 Score=119.93 Aligned_cols=188 Identities=15% Similarity=0.268 Sum_probs=2.9
Q ss_pred HHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCC
Q 008934 31 MATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGA 110 (548)
Q Consensus 31 ~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~ 110 (548)
...++.......-+++.++++.+++|++.+.+-++..+..++..|..+|. .|-|.+-+|.+++.+|++++++ |++
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l----Phf 90 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL----PHF 90 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc----cHh
Confidence 77777777788888999999999999999999999999999999999995 8889999999999999999884 554
Q ss_pred CCCCc----cc-------c-cCCC-------------------cCCCccchHHHHHHHHHHHHhccccccchhhhhhccC
Q 008934 111 KPPAC----DQ-------L-RNGC-------------------ESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQL 159 (548)
Q Consensus 111 ~~~~~----~~-------~-~~~~-------------------~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~ 159 (548)
..+.- .+ . ++.| ......-...++++.++.|+|....++...+++=|-+
T Consensus 91 ~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv 170 (539)
T PF03137_consen 91 LSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNV 170 (539)
T ss_dssp -------------------------------------------------------------SSS----------------
T ss_pred hcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccc
Confidence 32210 00 0 0012 1111113467888999999999999999999999988
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc---------------------cC-chhhhHHHHHHHHHHH
Q 008934 160 DKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN---------------------LG-WKVGFGVPAVIMLLSA 217 (548)
Q Consensus 160 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~---------------------~g-~~~~f~i~~~~~~i~~ 217 (548)
++++ -.-+.++.+....+|.++|..+++...+. .| |+..|.+.+.+.++..
T Consensus 171 ~~~~-------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a 243 (539)
T PF03137_consen 171 SKKN-------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA 243 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 8854 67889999999999999999888875521 13 8899998888777666
Q ss_pred HHHHhcCCceecc
Q 008934 218 LSFFLASPFYVKS 230 (548)
Q Consensus 218 ~~~~~~~~~~~~~ 230 (548)
+.++..+++.++.
T Consensus 244 ipl~~FPk~lp~~ 256 (539)
T PF03137_consen 244 IPLFFFPKKLPGT 256 (539)
T ss_dssp -------------
T ss_pred HHHHcCCccCCCc
Confidence 6555555544443
No 208
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=6e-07 Score=94.41 Aligned_cols=152 Identities=11% Similarity=0.060 Sum_probs=109.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHh
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWST 104 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~ 104 (548)
...+....++....++|.|++ ++|+++.+.++......++..++..+++++.||+ |+|+......+...++...+...
T Consensus 211 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~ 288 (401)
T PRK11043 211 IFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLA 288 (401)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444556666777888875 5899999999988888888899999999999996 99998766665555544433322
Q ss_pred cccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHH
Q 008934 105 TILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSA 184 (548)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 184 (548)
...+ ..+.+..++...+.+++.+...+...+...+..|+ + |+++.++.+.....
T Consensus 289 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~g~~~g~~~~~~~~ 342 (401)
T PRK11043 289 SLLS------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A-------TGKAAALQNTLQLG 342 (401)
T ss_pred HHhc------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c-------ChHHHHHHHHHHHH
Confidence 1000 01344455666778888888888888887777754 2 78999999888888
Q ss_pred HHHHHHHHHHHhhhccCchh
Q 008934 185 SSIVAVTCIVYIQDNLGWKV 204 (548)
Q Consensus 185 g~~~gp~i~~~l~~~~g~~~ 204 (548)
++..++.+.+.+.+......
T Consensus 343 ~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 343 LCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHccCCChhHH
Confidence 88888888888876443333
No 209
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.70 E-value=1.6e-07 Score=101.32 Aligned_cols=166 Identities=14% Similarity=0.055 Sum_probs=122.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+...+...++...+.+....+.+.|.+..++ ++...+.+..+..+...++.++.++++||+ |+|+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556666677777777777777777655554444 566667777777788899999999999996 999999988887776
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.+........+ ..+.+.+++..++.+++.+...+...++++|..+.++-+.+++..+..++
T Consensus 309 ~~~~~~~~~~~~------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 309 SCGVLLLMGLAA------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHhccC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 665554321001 11455666677788999999999999999999885542222244566888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCc
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGW 202 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~ 202 (548)
+..+...+|..+|+.+.|++.+..||
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888999999999999998876666
No 210
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.69 E-value=3.8e-07 Score=91.24 Aligned_cols=173 Identities=10% Similarity=0.061 Sum_probs=120.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhh-------------------cCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREY-------------------NMETTAATNIIFIWTAATNFLPIVGALLA 77 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-------------------g~s~~~ag~i~~~~~~~~~~~~~~~G~la 77 (548)
|+.+....+.+.++++|||..-...-..+... ..+...--.=..+.++.-.-+.++.+++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 55666777899999999998876554433321 11111111223455677778899999999
Q ss_pred hccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhc
Q 008934 78 DSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAE 157 (548)
Q Consensus 78 Dr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~ 157 (548)
|| +||||++..+++++.+..+++.... .. ..-..++..+|+.+. +.+.+.+.+-.|
T Consensus 406 er-lGRKkTMal~l~~f~iflfll~~c~------------------~r-n~~tvllf~arafis----g~fqvaYvYtPE 461 (528)
T KOG0253|consen 406 ER-LGRKKTMALSLILFGIFLFLLTTCK------------------TR-NAYTVLLFTARAFIS----GAFQVAYVYTPE 461 (528)
T ss_pred HH-hcchhHHHHHHHHHHHHHHHHHHhc------------------Cc-chhHHHHHHHHHHHh----chheEEEEecCc
Confidence 99 5999999999999999888777643 01 112345666677774 445677888899
Q ss_pred cCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 158 QLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 158 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
.+|. +.|+.+.|....+..+|+++.|.+. +....+-..+..+.+.+.+++.+...+
T Consensus 462 VyPT-------avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 462 VYPT-------AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred ccch-------hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHhee
Confidence 9998 5599999999999999999999888 333344555566666666666655444
No 211
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.67 E-value=1.7e-06 Score=90.90 Aligned_cols=180 Identities=11% Similarity=0.029 Sum_probs=132.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.+...+...++...+.-....+.+.|+++.-|.+....+.+.++..+.=...-.+.+++..|+ |.|++++++.+..++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3344444555666666666778889998865558888888877777788888889999999996 999999999998888
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
=..+.+..+ -|. ........++..+.|+..|....+...++.+..|++. |+++.+
T Consensus 286 R~~l~a~~~-~~~-----------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~-------~at~Q~ 340 (400)
T PF03825_consen 286 RWLLYAYFS-DPW-----------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL-------RATAQG 340 (400)
T ss_pred HHHHHHHhc-CCc-----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc-------hHHHHH
Confidence 766666542 000 0011223344567899999999999999999999955 899999
Q ss_pred HHHHHH-HHHHHHHHHHHHHhhhccCchh------hhHHHHHHHHHHHHHHHh
Q 008934 177 WYYVFV-SASSIVAVTCIVYIQDNLGWKV------GFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 177 ~~~~~~-~ig~~~gp~i~~~l~~~~g~~~------~f~i~~~~~~i~~~~~~~ 222 (548)
++.... .+|.++|..++|++.|++|-+. .+.+.++..++..+++++
T Consensus 341 l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 341 LYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 988764 7999999999999999877554 344455544444444444
No 212
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.66 E-value=3.6e-06 Score=88.34 Aligned_cols=124 Identities=14% Similarity=0.142 Sum_probs=97.6
Q ss_pred HHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHH
Q 008934 359 VLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFN 438 (548)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~ 438 (548)
.+++..|+.+| .+....+..|+.+.++-++..++++ +.|.+++.-++.|+-.+.+
T Consensus 422 ~~ffs~klI~k---iGHv~v~~lgLa~~~~Rf~~~S~L~----------------------n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 422 FYFFSFKLIEK---IGHVNVMYLGLACNVGRFLYYSYLQ----------------------NPWMVLPIEILQGITHALI 476 (618)
T ss_pred HHHHHHHHHHH---hcccceeeehhhHHHHHHHHHHHhc----------------------CchheeeHHHHHHHHHHHH
Confidence 44455566555 7777889999999999999999988 8898999999999999999
Q ss_pred hhhhhhhcccccCchhhHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 008934 439 MIGQTEFYYTELPKSMSSIASTLSGA-GLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANF 517 (548)
Q Consensus 439 ~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~ 517 (548)
..+.-+++...+|+++|.+++|+... ..++|-.+|+.+.|.+....+ ....|+..++.+++.+
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg----------------~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG----------------ARTTFRIFGIACLVTL 540 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh----------------hHHHHHHHHHHHHHHH
Confidence 99999999999999999999999854 455888888888887653321 1345777776666665
Q ss_pred HHHHHh
Q 008934 518 LYYLAC 523 (548)
Q Consensus 518 ~~~~~~ 523 (548)
+.+...
T Consensus 541 ~~~~~i 546 (618)
T KOG3762|consen 541 ALFISI 546 (618)
T ss_pred HHHHHh
Confidence 544443
No 213
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.63 E-value=1.2e-06 Score=92.70 Aligned_cols=164 Identities=10% Similarity=-0.045 Sum_probs=117.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHh-hcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCRE-YNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
|.++......++......++..+++.|+++. .+.+...++...+.+.....++.+++|+++||+ ++||++.++....+
T Consensus 232 ~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~ 310 (410)
T TIGR00885 232 RHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGM 310 (410)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHH
Confidence 3444445556666566667778899998653 255555556667777788899999999999995 99999988888777
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+..++..... +. .......+.++..+.++|...++..+..+++. +....
T Consensus 311 ~~~ll~~~~~-----------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~ 359 (410)
T TIGR00885 311 ALCLGSIFAG-----------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAA 359 (410)
T ss_pred HHHHHHHHcC-----------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHH
Confidence 7766666533 11 23556677888889999999999999998743 22122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc------CchhhhHHHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNL------GWKVGFGVPAVIML 214 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~------g~~~~f~i~~~~~~ 214 (548)
.+ . ...+|+++.|.+.|++.|.. +.+..|+++.++.+
T Consensus 360 ~l-~-~~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 360 GL-V-MAIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HH-H-HHHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 22 2 23499999999999999954 47888887766544
No 214
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.3e-06 Score=91.93 Aligned_cols=165 Identities=16% Similarity=0.143 Sum_probs=135.9
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.....+...++...++......+..|.+..+|.++..+.+.......+..++.++..+|.+|+ |+||++.++.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4444555567777777777788888899989999999999999999999999899999999996 999999999999999
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
+.++..+.. ..+.+++++..++.++|.+...+...++++|..+-++-+..++.-+-.++
T Consensus 315 ~~~~~~f~~---------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s 373 (467)
T COG2211 315 GYLLLYFTP---------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYS 373 (467)
T ss_pred HHHHHHhhc---------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHH
Confidence 999988755 22678888888999999999999999999999986664443344566667
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCch
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWK 203 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~ 203 (548)
......=+|.+++..+.|++.+..||.
T Consensus 374 ~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 374 GMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 777777889999988888888766653
No 215
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.56 E-value=5.7e-07 Score=93.03 Aligned_cols=140 Identities=10% Similarity=0.065 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.++......++.....+++..+++.|+++.+|+++.+++.+.....+...++.+++|+++||+ |||+.+..+..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 344455555666667778889999999999999999999999999999999999999999996 9999888887766666
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..++.... .+ ..+.+...+...+.+++.|...+...++.++..|+ + +++++++
T Consensus 305 ~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-------~g~~~g~ 357 (366)
T TIGR00886 305 AFLVVLGL-VS------------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A-------TGAVSGL 357 (366)
T ss_pred HHHHHhcC-CC------------------cchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h-------cccHHHH
Confidence 55554422 00 00344444555556666666667777888887763 2 7888888
Q ss_pred HHHHHHHH
Q 008934 178 YYVFVSAS 185 (548)
Q Consensus 178 ~~~~~~ig 185 (548)
.+...++|
T Consensus 358 ~~~~~~~g 365 (366)
T TIGR00886 358 VGAIGNLG 365 (366)
T ss_pred HHHhccCC
Confidence 77777665
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.55 E-value=5.8e-06 Score=86.74 Aligned_cols=143 Identities=10% Similarity=0.062 Sum_probs=100.3
Q ss_pred HHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCC
Q 008934 32 ATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAK 111 (548)
Q Consensus 32 ~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~ 111 (548)
.........+.|+++.+|+++.+.+++.....++..++.++.+++.||+ +++... +.....++.+...... ..
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~~--- 294 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPG-WF--- 294 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHH-Hh---
Confidence 3333345567788888999999999998888888889999999999996 743322 3222222222221111 00
Q ss_pred CCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 008934 112 PPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVT 191 (548)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~ 191 (548)
...+.+.+..+..+.++|.+...|...+...|.+|++ ++...++.+...++|+.+++.
T Consensus 295 --------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 295 --------------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL--------AGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred --------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------chHHHHHHHHHHHHHHHHHHH
Confidence 0113456677778889999999999999999888742 578888888888999999999
Q ss_pred HHHHhhhccCch
Q 008934 192 CIVYIQDNLGWK 203 (548)
Q Consensus 192 i~~~l~~~~g~~ 203 (548)
+.+++.+...+.
T Consensus 353 ~~~~~~~~~~~~ 364 (394)
T PRK11652 353 LSAMLPQTGQFS 364 (394)
T ss_pred HHHHccCCchHH
Confidence 998886653333
No 217
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.54 E-value=1.5e-06 Score=92.82 Aligned_cols=179 Identities=12% Similarity=-0.005 Sum_probs=120.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-------hHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGR-------YRMIGF 89 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Gr-------k~~~~~ 89 (548)
+.+|.+....+++..+++.+..++|.|+.+.+|++..+.|++.++..+...+..+++|+++||. -+ +|-+.=
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHH
Confidence 4567788899999999999999999999999999999999999999999999999999999996 44 222222
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccch
Q 008934 90 GCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKG 169 (548)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 169 (548)
+......+..+..++. ++. .+.+.-++...+.-...|...+-...-..|..|+
T Consensus 337 ~i~~~~~ai~l~~l~~-~~~------------------~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq-------- 389 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAF-TSD------------------EHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQ-------- 389 (466)
T ss_pred hHHHHHHHHHHHeeee-cCC------------------CcchHHHHHHHHHHHHcccchhhhHhhhhhccch--------
Confidence 2222222322332221 111 1221111111111111122222222222222333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhc---cCchhhhHHHHHHHHHHHHHHHhc
Q 008934 170 ALQSYFSWYYVFVSASSIVAVTCIVYIQDN---LGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 170 ~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~---~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
.-+.++++.+...++.+.++|.+.+.+.+. ..|+.+|++.+++.+++.+.+.+.
T Consensus 390 ~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 390 HAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 358899999999999999999999998842 369999999999888877665543
No 218
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.51 E-value=2.6e-06 Score=91.91 Aligned_cols=186 Identities=10% Similarity=0.066 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhH----HHHHHHHHHHHHHHHHHHHH----HHhhccccchHHH--H
Q 008934 19 LPFIIANEAFERMATVGFTPNMILYLCREYNMETTA----ATNIIFIWTAATNFLPIVGA----LLADSYVGRYRMI--G 88 (548)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~----ag~i~~~~~~~~~~~~~~~G----~laDr~~Grk~~~--~ 88 (548)
+..++....+....+.-..+.++.|.++..+.+... .+++.+...+...+.+++-. ++.||..+.+... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 344444555566666666677888877765554322 66777777777777776644 4555421334433 6
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccc
Q 008934 89 FGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSK 168 (548)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (548)
+|.++..++.....+..... +.....+.+++++..++.++|.....|...+++.+..|+
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~--------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~------- 412 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA--------------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ------- 412 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc--------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH-------
Confidence 67888777776666432000 001123788899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 169 GALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 169 ~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
+.|++++++++....+|..+++.+.....+..+|...|...++..++..++++...|
T Consensus 413 ~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 413 RLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 449999999999999999999988887777677887777777666655555544433
No 219
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.49 E-value=5e-06 Score=88.33 Aligned_cols=189 Identities=12% Similarity=0.004 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.....+...+...+.-.-...+....+-++-|++..++.+++....+...+..+++.++.||+ |||+.++.+..++.+.
T Consensus 270 ~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHH
Confidence 345555566666665555555556666778899999999999999999999999999999996 9999999999988887
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchH-HHHHHHHHHHHhccc-cccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLM-PLYFAFGLMSLGSGG-IRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
..++.....+-. ....... ..+.+.++..+..+. ..|...-+.+|.+|++. |..++
T Consensus 349 ~~~~~~~~~l~~---------------~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~-------R~aa~ 406 (485)
T KOG0569|consen 349 LLLMSIALFLSN---------------SFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA-------RSAAQ 406 (485)
T ss_pred HHHHHHHHHHHH---------------HhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc-------hHHHH
Confidence 777665441111 0000111 223333333333332 25778889999999955 88999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceecc
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVKS 230 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~ 230 (548)
++.+....+...+-...-..+.+..|- +.|.+..+..++..+..+...|+.+++
T Consensus 407 s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 407 SVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 888777777666655555666666664 566666666666666666666665444
No 220
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.49 E-value=6.9e-05 Score=79.05 Aligned_cols=326 Identities=13% Similarity=0.049 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHH
Q 008934 59 IFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFG 138 (548)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 138 (548)
..+-.....+..++++.+.|+ +|.|..+.++...+..-...+..- |.+.++++-+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~------------------------N~y~~yfssa 110 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP------------------------NSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc------------------------chHHHHHHHH
Confidence 566667777888999999999 599999999998877755555431 5678999999
Q ss_pred HHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc--------cCch-------
Q 008934 139 LMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN--------LGWK------- 203 (548)
Q Consensus 139 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~--------~g~~------- 203 (548)
+.|+|.+..+...-.+.++..++++ +++..++.-...+.+.++|..+...+... .+.+
T Consensus 111 llG~Gaallw~GqG~ylt~~st~~t-------ie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTRET-------IERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVL 183 (461)
T ss_pred HhhhhHHheecccceehhhcCChhh-------HHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchh
Confidence 9999999999888888888888744 66666665555566666664433222211 0110
Q ss_pred -hhh---HHHHHHHHHHH---HHHHhcCCceeccCCCCC--CchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCcccC
Q 008934 204 -VGF---GVPAVIMLLSA---LSFFLASPFYVKSKANTS--LLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRLM 274 (548)
Q Consensus 204 -~~f---~i~~~~~~i~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (548)
..| .+.++...+.. +.......+.....++.+ ...+..+....+++++++... .
T Consensus 184 ~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L-----------------~ 246 (461)
T KOG3098|consen 184 FIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLL-----------------F 246 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHH-----------------H
Confidence 011 11111111111 111111111111111111 222222333333333222110 0
Q ss_pred CcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCC-C-CceecCcccchhhHHHHHHHH
Q 008934 275 PSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVT-P-NFEIPSGSFNIFAILTLTIWI 352 (548)
Q Consensus 275 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg-~-~~~i~~~~~~~~~~~~ii~~~ 352 (548)
+......+... +| .......+. . ....+...+..++++.+.+..
T Consensus 247 ~~f~~tG~~~S------------------f~----------------~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~ 292 (461)
T KOG3098|consen 247 PFFFYTGLETS------------------FW----------------ISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGE 292 (461)
T ss_pred HHHHHHHHHHH------------------HH----------------HhccchhhhhhhhccCcchhHHHHHHHHHhHHH
Confidence 00000000000 00 000000000 0 011233455666666665555
Q ss_pred HHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCCC--CcccccccchHHHHHHHH
Q 008934 353 GLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINE-GISD--DLRAVVQMSAMWQLPYLV 429 (548)
Q Consensus 353 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~s~~~~i~~~~ 429 (548)
-+.+....++.+|. ++ ++....+.+|.++..++.++...-. +++ +..+ +.....+.+.....+...
T Consensus 293 v~~g~~~~~l~~ri-r~---fg~~~~~~~~~~~~~~~~~li~l~~-------p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 293 VIGGLDFSILSKRI-RG---FGRKPTVLIGIIIHLIGFLLIHLSF-------PNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHHHHhhhh-hh---cccCcchhHHHHHHHHHHHHHhccc-------cccCCCCCCcccccccccchhHHHHHHH
Confidence 55444455545443 33 6777778888877776666543321 111 1111 111112234556677889
Q ss_pred HHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 430 LSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNA 479 (548)
Q Consensus 430 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~ 479 (548)
+.|++.+..+...+.......|. .|.++.+++-+-+++++.++....+.
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~~~-~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLYPD-DRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999999999954 58899999999999999887777665
No 221
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.49 E-value=7.6e-06 Score=86.72 Aligned_cols=172 Identities=15% Similarity=0.061 Sum_probs=115.2
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|.++.......+....++....+.|.|+++.+|+++.+.++.......+..++..+.+++.++. +++|.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4455555566666777778888889999999999999999998878888888888888876553 555554444444444
Q ss_pred HHHHHHHhcc-cCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 97 GMVLLWSTTI-LPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 97 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+..+...... .+. +.+..+++.++.++|.+...|+..+... .+.+.+ ++++.
T Consensus 297 g~~l~~~~~~~~~~-------------------~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~------~G~a~ 349 (413)
T PRK15403 297 GLALLIVGNLLWPH-------------------VWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP------KGTVS 349 (413)
T ss_pred HHHHHHHHHHHccc-------------------cHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC------CcHHH
Confidence 4444332210 011 3334567788889999998888885433 222222 57777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHH
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSA 217 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~ 217 (548)
++.+.....+...++...+++.++ +-..+|.+.+++..+..
T Consensus 350 a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 350 ASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHH
Confidence 777777788888888888888765 55777766665444433
No 222
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.47 E-value=4.7e-06 Score=86.83 Aligned_cols=178 Identities=10% Similarity=0.059 Sum_probs=136.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhh---cCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREY---NMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
.|.+|...+....-...|+..-...+.|.+..+ +.+....|.+.+.-.+.-.+...+..++.+|+ |.|+.++++..
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 356666555544445555555566788877543 34556678888888888888999999999995 99999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 93 TCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 93 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+.++=..++++++ +++.+.+.+.+-++-.+....+..-++++.+|+ +..+
T Consensus 298 i~~iRi~~~~~~~-----------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~-------rlsA 347 (412)
T PF01306_consen 298 IMAIRIIGSGFAT-----------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDK-------RLSA 347 (412)
T ss_dssp HHHHHHHHHHT-------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-G-------GGHH
T ss_pred HHHHHHHHHhhhc-----------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-------hHHH
Confidence 9888878888766 788899999999999999999999999999998 3356
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcC
Q 008934 173 SYFSWY-YVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLAS 224 (548)
Q Consensus 173 ~~~~~~-~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 224 (548)
+.+.+. .....+|.++.+.++|++.|+.|++..|++.+.+++...++..+..
T Consensus 348 t~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 348 TLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 777764 4567899999999999999999999999888776665555444443
No 223
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.44 E-value=5.6e-06 Score=72.20 Aligned_cols=120 Identities=16% Similarity=0.253 Sum_probs=90.6
Q ss_pred hhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhh
Q 008934 363 ASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQ 442 (548)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~ 442 (548)
.+++.|| .++++.+..+..+..++.+...... +.+.+....++.+++.+...+..
T Consensus 18 ~g~~~d~---~g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~~~~~ 72 (141)
T TIGR00880 18 SGLLTDR---FGRKPVLLVGLFIFVLSTAMFALSS----------------------NITVLIIARFLQGFGAAFALVAG 72 (141)
T ss_pred HHHHHhh---cchhHHHHHHHHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHHHHHhH
Confidence 3444444 5566677778777777777665543 56777788899999999999999
Q ss_pred hhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 008934 443 TEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLA 522 (548)
Q Consensus 443 ~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~ 522 (548)
+....+..|++.|++++++.+....+|..+++.+.+.+.+.. ++...|+..+.+.++..+..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 73 AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----------------GWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----------------chHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999988765311 2345667766666666555544
Q ss_pred h
Q 008934 523 C 523 (548)
Q Consensus 523 ~ 523 (548)
.
T Consensus 137 ~ 137 (141)
T TIGR00880 137 L 137 (141)
T ss_pred c
Confidence 3
No 224
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.40 E-value=1.5e-07 Score=97.01 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=108.9
Q ss_pred HHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHH
Q 008934 359 VLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFN 438 (548)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~ 438 (548)
.+|+.+-+.+| +++++.+.+|..+..++.+..++.. .+|.+.+.-.+.|+||+..
T Consensus 84 ~sPl~gyLadr---yNR~~v~~vG~~iW~~Av~~~~fs~----------------------~Fwq~~l~R~~vGiGeAs~ 138 (493)
T KOG1330|consen 84 ASPLFGYLADR---YNRKRVIAVGIFIWTLAVFASGFSN----------------------HFWQVLLCRGFVGIGEASY 138 (493)
T ss_pred HHHHHHHHHhh---cCcceEEeeHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHhccchhhh
Confidence 66777777777 8888999999999999999998876 7999999999999999999
Q ss_pred hhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 008934 439 MIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFL 518 (548)
Q Consensus 439 ~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~ 518 (548)
.|..++++.+..|.++||.+.+++++...+|+.+|-.+...+...+. +..+.|+..+++.++..+
T Consensus 139 ~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~---------------~Wr~af~~~avl~vi~~~ 203 (493)
T KOG1330|consen 139 SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF---------------WWRWAFRGSAVLGVIVGL 203 (493)
T ss_pred cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc---------------ceEEEEEeehHHHHHHHH
Confidence 99999999999999999999999999999999999888777654331 235678888888887766
Q ss_pred HHHHhhhcc
Q 008934 519 YYLACCKAY 527 (548)
Q Consensus 519 ~~~~~~~~~ 527 (548)
+...+.++.
T Consensus 204 L~~~f~~eP 212 (493)
T KOG1330|consen 204 LVFLFVREP 212 (493)
T ss_pred HHHhhccCc
Confidence 655554433
No 225
>PRK11462 putative transporter; Provisional
Probab=98.38 E-value=8.5e-06 Score=87.62 Aligned_cols=162 Identities=7% Similarity=0.022 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
....++...++..++..........|.+..+|. +...+.+...+.+...++.+++++++||+ |+|+++..+..+..+.
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~ 306 (460)
T PRK11462 229 QWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVI 306 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 333444445555555554445555554444553 33455677788888999999999999996 9998877655544443
Q ss_pred HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHH
Q 008934 98 MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSW 177 (548)
Q Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 177 (548)
..+..+.+ . .+...+++..++.|++.+...+...++.+|..+.++-+.+++..+..++.
T Consensus 307 ~~~~~~~~---~------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~ 365 (460)
T PRK11462 307 SLAMFFVP---M------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAG 365 (460)
T ss_pred HHHHHHhc---h------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHH
Confidence 33333221 1 12233344455667777777777788999988854422221223444566
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCc
Q 008934 178 YYVFVSASSIVAVTCIVYIQDNLGW 202 (548)
Q Consensus 178 ~~~~~~ig~~~gp~i~~~l~~~~g~ 202 (548)
......+|.++|+.++|++.+..||
T Consensus 366 ~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 366 TLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6678899999999999988776565
No 226
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.34 E-value=3e-05 Score=75.64 Aligned_cols=155 Identities=14% Similarity=0.100 Sum_probs=105.6
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH
Q 008934 16 LRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCL 95 (548)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~ 95 (548)
|-.....+.++.+.. ..|.+ .....-+++++|+|.+|...+.....++..++ ++.|.+.|++ |++.++.+|.+...
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGF 77 (250)
T ss_pred hhhHHHHHHHHHhcC-cccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHH
Confidence 444334444444433 33433 34445678999999999999999999999875 8899999996 99999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+|......+.. +.......|.+.+..++.+.|.+....+......+.||++ |+.+.
T Consensus 78 ~GY~~~~l~~~----------------~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~--------RG~vv 133 (250)
T PF06813_consen 78 VGYGLLWLAVS----------------GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS--------RGTVV 133 (250)
T ss_pred HHHHHHHHHHh----------------CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc--------cCcee
Confidence 99988887651 0111124566666666666666655455555556788853 78888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQD 198 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~ 198 (548)
++.-....+++.+-..+-..+.+
T Consensus 134 gilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 134 GILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred hhhhHHHHhHHHHHHHHHHHHcC
Confidence 88766666666655544444443
No 227
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.29 E-value=4.1e-05 Score=75.28 Aligned_cols=153 Identities=17% Similarity=0.203 Sum_probs=113.7
Q ss_pred HHHHhhHHHHHHHHhHhhcCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccC
Q 008934 31 MATVGFTPNMILYLCREYNMET--TAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILP 108 (548)
Q Consensus 31 ~~~~~~~~~l~~yl~~~lg~s~--~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~ 108 (548)
..........+.+ ..+++.+. ...+++.+.+.+...++.++.|+++||+ |||+.+..+.....++.++..+..+
T Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-- 91 (338)
T COG0477 16 LDLGLLSPALPLL-LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-- 91 (338)
T ss_pred HhcchHHHHHHHH-HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--
Confidence 3433334445555 44555555 5789999999999999999999999997 9998888888765555555555441
Q ss_pred CCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHH-HHHHHHH
Q 008934 109 GAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYV-FVSASSI 187 (548)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ig~~ 187 (548)
...+.+++.|..+|++.+...+...+++.+.+|+ . +.|+...+.... ...+|..
T Consensus 92 -------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~ 146 (338)
T COG0477 92 -------------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A-----TERGLAVGLVTLGAGALGLA 146 (338)
T ss_pred -------------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h-----hHHHHHHHHHHHHHHHHHHH
Confidence 1467888889999999999999999999999987 2 237888888777 5788888
Q ss_pred HHHHHHHHhhhc--cCchhhhHHHHHH
Q 008934 188 VAVTCIVYIQDN--LGWKVGFGVPAVI 212 (548)
Q Consensus 188 ~gp~i~~~l~~~--~g~~~~f~i~~~~ 212 (548)
++|.+++.+... .+|+..|.+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 147 LGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 888777776654 4788855555443
No 228
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.23 E-value=1.4e-05 Score=76.78 Aligned_cols=318 Identities=16% Similarity=0.081 Sum_probs=164.6
Q ss_pred HHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCC
Q 008934 42 LYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNG 121 (548)
Q Consensus 42 ~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 121 (548)
.|+...+|+...+.|.+........++...+.|-|+|+- ||||.-. .+++..+++.++--
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracv----tycitYiLsCiTKh--------------- 120 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACV----TYCITYILSCITKH--------------- 120 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-cccccee----eehHHHHHHHHhhc---------------
Confidence 466778999999999998888888888889999999995 9999654 44455555555431
Q ss_pred CcCCCccchHHHHHHHHHHHHhccccccchhhh-hhccCCCCCCCccchhhHHHHHHHH----HHHHHHHHHHHHHHHHh
Q 008934 122 CESATWSQLMPLYFAFGLMSLGSGGIRSSSLAF-GAEQLDKGDGTKSKGALQSYFSWYY----VFVSASSIVAVTCIVYI 196 (548)
Q Consensus 122 ~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~ig~~~gp~i~~~l 196 (548)
+.+.-.++++|.+-|+.++...++.-+. ++|..+.++ -+......-+. ..+.+-++++...+-.+
T Consensus 121 -----SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~-----FeqqWls~TFskA~ffgNglvAiiaGlfgn~l 190 (454)
T KOG4332|consen 121 -----SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRG-----FEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLL 190 (454)
T ss_pred -----CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccC-----ChHhhhhHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 1256679999999999999887776554 333332211 01111111111 11223333344444445
Q ss_pred hhcc--CchhhhHHHHHHHHHHHHHHHhcCC-ceeccCCCCCCchhHHHHHHHHHhhccCCCCCcchhhhhhcCCCCccc
Q 008934 197 QDNL--GWKVGFGVPAVIMLLSALSFFLASP-FYVKSKANTSLLPGLTQVLVASFKNRRTKLPTQATEEMYHHGKGSMRL 273 (548)
Q Consensus 197 ~~~~--g~~~~f~i~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (548)
.+.+ |.-.+|-.++....++..+.+-.+. .+-+...+++-+.+..........+++..+.+ .-+.+++...+.
T Consensus 191 vd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~LLG-~iqsLFE~smyt--- 266 (454)
T KOG4332|consen 191 VDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIALLG-AIQSLFEGSMYT--- 266 (454)
T ss_pred HHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHHHH-HHHHHHhhhhhe---
Confidence 5544 5667777666655555544333222 22111111111111111111111111111100 011111110000
Q ss_pred CCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHH
Q 008934 274 MPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIG 353 (548)
Q Consensus 274 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~ 353 (548)
-++. +...++.+ .-++|.+.+.+-.+...++...
T Consensus 267 ----------------------------FVFL---------------WTPaLspn---~e~iPhGfiFatFMlASmLGSS 300 (454)
T KOG4332|consen 267 ----------------------------FVFL---------------WTPALSPN---DEEIPHGFIFATFMLASMLGSS 300 (454)
T ss_pred ----------------------------eeee---------------ecccCCCC---cccCCchhHHHHHHHHHHHhhH
Confidence 0000 01122221 2346666666666666777666
Q ss_pred HHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHH
Q 008934 354 LYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGL 433 (548)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 433 (548)
+..++.. + +. ++...-+.+.+++..+.+.+..... . ..+ .+-+.-.-.+++.++-.
T Consensus 301 la~Rl~s----~---s~--~~ve~ymqivf~vs~a~l~Lpilt~-~-vsP-------------~kes~~~s~i~F~~~E~ 356 (454)
T KOG4332|consen 301 LASRLLS----R---SS--PKVESYMQIVFLVSIAALLLPILTS-S-VSP-------------SKESPSESLIGFCLFEA 356 (454)
T ss_pred HHHHHHh----c---CC--cccchHHHHHHHHHHHHHHHHHHHh-c-cCC-------------CcCCchHHHHHHHHHHH
Confidence 6544432 2 11 3333444444444444333322111 0 011 11133333667788888
Q ss_pred HHHHHhhhhhhhcccccCchhhHHHHHHHH
Q 008934 434 AMAFNMIGQTEFYYTELPKSMSSIASTLSG 463 (548)
Q Consensus 434 g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 463 (548)
.-++.+|..+-+-.+..|++.|++.+..+-
T Consensus 357 cvGlfwPSimkmRsqyIPEearstimNfFR 386 (454)
T KOG4332|consen 357 CVGLFWPSIMKMRSQYIPEEARSTIMNFFR 386 (454)
T ss_pred HHhhcchHHHHHHHhhCCHHHHhhhhhhee
Confidence 999999999999999999999998776654
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.20 E-value=0.00011 Score=75.55 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=134.3
Q ss_pred HHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcc
Q 008934 27 AFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTI 106 (548)
Q Consensus 27 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~ 106 (548)
++..++++.-=..+=+|=-+.+|++..++..++..+..+..++....|++..|..+++++..+++....++..+..++..
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555555556666666899999999999999999999999999999986679999999999988888877776652
Q ss_pred cCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHH
Q 008934 107 LPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASS 186 (548)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 186 (548)
..+.+.+..+.+++|+|.|.......+...|..++++ .+..++.+.....++.
T Consensus 298 --------------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~-------aG~~mG~WGaaQA~A~ 350 (403)
T PF03209_consen 298 --------------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR-------AGLFMGAWGAAQAIAR 350 (403)
T ss_pred --------------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc-------hhHHHHHHHHHHHHHH
Confidence 1257889999999999999999999999999998855 6899999999999999
Q ss_pred HHHHHHHHHhhhc----------cCchhhhHHHHHHHHHHHHHH
Q 008934 187 IVAVTCIVYIQDN----------LGWKVGFGVPAVIMLLSALSF 220 (548)
Q Consensus 187 ~~gp~i~~~l~~~----------~g~~~~f~i~~~~~~i~~~~~ 220 (548)
.+|-.++|.+.|. .+|..+|.+-++..++++.+.
T Consensus 351 Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 351 GLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887753 246677777766666555443
No 230
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.19 E-value=4.2e-05 Score=83.11 Aligned_cols=180 Identities=13% Similarity=0.056 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhH--hhcCCh------hHHHHHHHHHHHHHHHHHHHH----HHHhhccccchHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCR--EYNMET------TAATNIIFIWTAATNFLPIVG----ALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~------~~ag~i~~~~~~~~~~~~~~~----G~laDr~~Grk~~~~~~~ 91 (548)
+..++....+|.+...++.++.. ..+.+. ...+++.+...+...+..++. +++.||+ +..+.+.+|+
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~ 357 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHH
Confidence 33445566677777777777553 112211 224556666665666666666 6666664 7778899999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
++..++...+......+. ..+..+.+++.+..+++++|.+...|...+++.+..|+ +.|
T Consensus 358 ~l~~l~f~~l~~~~~~~~--------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~-------~~r 416 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFAN--------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQ-------RLM 416 (500)
T ss_pred HHHHHHHHHHHHHHHhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcH-------HHH
Confidence 999999888776652111 01123566788899999999999999999999999999 449
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh----------ccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 172 QSYFSWYYVFVSASSIVAVTCIVYIQD----------NLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp~i~~~l~~----------~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
+++++.++....+|+.++..+.+.... ..++...|...++..++..++++...+
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887777777776665543211 113566776666655444443443333
No 231
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.19 E-value=6.4e-06 Score=83.63 Aligned_cols=135 Identities=15% Similarity=0.101 Sum_probs=113.3
Q ss_pred HHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHH
Q 008934 354 LYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGL 433 (548)
Q Consensus 354 l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 433 (548)
+.+.++.|+.+.+.+| .+.+..|.+|+.++..+.+++++.+ +++.++++-.++|+
T Consensus 117 ~~qllvnp~~G~l~~~---iGy~ipm~~Gl~vmf~sTilFafg~----------------------sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 117 LVQLLVNPFFGNLIDR---IGYKIPMVAGLFVMFLSTILFAFGN----------------------SYPMLFVARSLQGV 171 (464)
T ss_pred HHHHHhcccchhhHHH---hccccHHHHHHHHHHHHHHHHHHcc----------------------hhHHHHHHHHHhhh
Confidence 4455567777777766 7777889999999999999999987 88899999999999
Q ss_pred HHHHHhhhhhhhcccccCchh-hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHH
Q 008934 434 AMAFNMIGQTEFYYTELPKSM-SSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTAL 512 (548)
Q Consensus 434 g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 512 (548)
|.++.+....++..+..|+|. ||.++|+-..+.++|..+||.+.|.+....+ +..-|.+++++
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G----------------k~aPFlVL~~v 235 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG----------------KSAPFLVLAIV 235 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC----------------CcCcHHHHHHH
Confidence 999999999999999998887 5999999999999999999999998775443 34458999999
Q ss_pred HHHHHHHHHHhhhcccc
Q 008934 513 SMANFLYYLACCKAYGP 529 (548)
Q Consensus 513 ~~v~~~~~~~~~~~~~~ 529 (548)
.++...+-++..+.++.
T Consensus 236 ~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 236 LLLDGALQLLVIEPTEM 252 (464)
T ss_pred HHHHHHHHHheeCcccc
Confidence 98887776666555443
No 232
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.13 E-value=6.2e-05 Score=81.54 Aligned_cols=178 Identities=13% Similarity=0.129 Sum_probs=116.4
Q ss_pred HHHHHHHHHhhHHHHHHHHhHhhcCCh----hHHHHHHHHHHHHHHHHHHHHHHHhhccccchH-------HHHHHHHHH
Q 008934 26 EAFERMATVGFTPNMILYLCREYNMET----TAATNIIFIWTAATNFLPIVGALLADSYVGRYR-------MIGFGCFTC 94 (548)
Q Consensus 26 ~~~~~~~~~~~~~~l~~yl~~~lg~s~----~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~-------~~~~~~~~~ 94 (548)
..+....+......++.|.++..+.+. ....++.+...+...+..|+.|++.||. |+|+ -+.+|+++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 444555566666778888875433321 1234444555566767888889999995 9887 377788777
Q ss_pred HHHHHHHHHhcc-cCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 95 LLGMVLLWSTTI-LPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 95 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
.++......... ... .....+.+++....+++|+|.+...|...+++.+..|++ .++.
T Consensus 357 ~~~~~~~~~~~~~~~~--------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~-------~~g~ 415 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD--------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH-------LMGF 415 (489)
T ss_pred HHHHHHHHHHHHhhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH-------HHHH
Confidence 777654432110 000 001225677788899999999999999999999999984 4899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---------cc-CchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQD---------NL-GWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~---------~~-g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
++++++...++|..+|..++..... .. .+...|...++..++..++++...|
T Consensus 416 ~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 416 ILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877765521 01 2345565555555444444444333
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.13 E-value=7.9e-05 Score=76.19 Aligned_cols=157 Identities=13% Similarity=0.116 Sum_probs=117.8
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
|...+-.+..|+---.=-.+-.+++.|+.+..|.+..++....+.+..+.+++..++-++..|+ ...|++.+..+...+
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~il 314 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAIL 314 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 3333434444444333344558999999988999999999999999999999999999999996 888888877765554
Q ss_pred HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHH
Q 008934 97 GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFS 176 (548)
Q Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 176 (548)
-.+...++. + ..-+.+..+.|+..+.++|+..+...+..|++.. .+++.
T Consensus 315 l~~~~~l~~-----------------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts------~~s~~- 363 (422)
T COG0738 315 LLLAVALIG-----------------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS------VGSGL- 363 (422)
T ss_pred HHHHHHHhc-----------------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc------cccee-
Confidence 444444443 2 3344456778999999999999999999996543 33332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhH
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFG 207 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~ 207 (548)
-.+...|+++-|.+.|++.|+.|-...+.
T Consensus 364 --l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 364 --LVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred --eeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 23567899999999999999998777666
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.11 E-value=1.1e-05 Score=86.90 Aligned_cols=147 Identities=8% Similarity=-0.154 Sum_probs=112.9
Q ss_pred HhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCc
Q 008934 44 LCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCE 123 (548)
Q Consensus 44 l~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (548)
.++.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.........-....
T Consensus 279 ~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~------------ 345 (468)
T TIGR00788 279 TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA------------ 345 (468)
T ss_pred EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc------------
Confidence 3467999999999999999999999999999999995 999999999998888765543211000000
Q ss_pred CCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--
Q 008934 124 SATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLG-- 201 (548)
Q Consensus 124 ~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g-- 201 (548)
....+.+.+....++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.++.|
T Consensus 346 -~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~-------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~ 417 (468)
T TIGR00788 346 -FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC-------ESSVFALLASILHLGSSVSGFLGVLLMETIGIT 417 (468)
T ss_pred -cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc-------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 000122345555678888888888899999999999865 7999999999999999999999999998877
Q ss_pred ---chhhhHHHHH
Q 008934 202 ---WKVGFGVPAV 211 (548)
Q Consensus 202 ---~~~~f~i~~~ 211 (548)
++..+.+..+
T Consensus 418 ~~~~~~~~~~i~i 430 (468)
T TIGR00788 418 CDNSNNLWLLILG 430 (468)
T ss_pred cccccchHHHHHH
Confidence 6555544333
No 235
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.11 E-value=2.5e-05 Score=61.70 Aligned_cols=68 Identities=22% Similarity=0.238 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
...++...+...+.++++.|++ +.|+|+.+.|.+.++..+...+++++.|+++||+ |++|.+.....+
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 3455666677788899999977 6999999999999999999999999999999996 998888776554
No 236
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.07 E-value=1.3e-05 Score=84.38 Aligned_cols=167 Identities=7% Similarity=-0.029 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHH
Q 008934 24 ANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWS 103 (548)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~ 103 (548)
...++..+..--+..+|--+ .+++|-.++--|.....-..+-.+.-++.+++..|+ |+-|++.++++.+.+=.+.++.
T Consensus 378 ~~av~mG~g~~lv~tFLfWH-led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~ 455 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWH-LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSY 455 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHH
Confidence 34444455555555666445 446776666667555555666667778999999995 9999999999999888777776
Q ss_pred hcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHH-
Q 008934 104 TTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFV- 182 (548)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~- 182 (548)
.. |+|..+..-+++|+..+..+.++.+++++..|++- |+++.++....-
T Consensus 456 L~-----------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l-------~at~Q~l~~g~f~ 505 (618)
T KOG3762|consen 456 LQ-----------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL-------RATAQGLLQGIFH 505 (618)
T ss_pred hc-----------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc-------hHHHHHHHHHHhc
Confidence 55 88999999999999999999999999999999954 788888876554
Q ss_pred HHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHh
Q 008934 183 SASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFL 222 (548)
Q Consensus 183 ~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 222 (548)
.+|-.+|.+++|.+.+.+|-+..|.++++..++.++.+..
T Consensus 506 GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 506 GLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred ccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999899999888776665554443
No 237
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.02 E-value=0.0002 Score=75.63 Aligned_cols=115 Identities=16% Similarity=0.133 Sum_probs=93.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK 452 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~ 452 (548)
.+.++.+.++.+...+..+++.+.. +.+.+.+.-++.|++|+... +.+.++++..|+
T Consensus 89 lG~K~vL~l~~l~Wsl~t~L~~fa~----------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~ 145 (511)
T TIGR00806 89 LRYKPVLVLQALSFVCVWLLLLLGT----------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP 145 (511)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH
Confidence 6677888999999999998888876 78889999999999999999 999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhh
Q 008934 453 SMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACC 524 (548)
Q Consensus 453 ~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~ 524 (548)
++|++++|.++.+..+|.++++.+.+.+.. -+|- .|....++..+...+++++.+++.
T Consensus 146 kER~ratsi~~sg~~vG~~Ia~~L~qll~s-------~gWr-------~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 146 SRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-------LGWI-------SYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCch-------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999888331 1453 234444454555555666666665
No 238
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.02 E-value=0.00019 Score=76.97 Aligned_cols=206 Identities=12% Similarity=0.030 Sum_probs=140.3
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHh-hcCChh------HH---H-HHHHHHHHHHHHHHHHHHHHhhccc
Q 008934 13 KGGLRTLPFIIANEAFERMATVGFTPNMILYLCRE-YNMETT------AA---T-NIIFIWTAATNFLPIVGALLADSYV 81 (548)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~s~~------~a---g-~i~~~~~~~~~~~~~~~G~laDr~~ 81 (548)
+..+|.++.+..++++..++++.+..+.+.|+.++ +|-++. +. | +....+.+.+.+.+++--++.+|+
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 34468888899999999999999999999998863 443321 11 2 334445555556666777889985
Q ss_pred cc-hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCC
Q 008934 82 GR-YRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLD 160 (548)
Q Consensus 82 Gr-k~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~ 160 (548)
|+ |++..++.++.++++....+..+++.=..+ .|.......++....+..++...+.|+..+.....-.+++++..+
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY--YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc--ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 95 677788888888877777644321100000 000000000111124667777888999999999999999999999
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--chhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 161 KGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLG--WKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 161 ~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g--~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
+++ ++.|..+++.+.+..+..++.....|.+.+..| -.+.+.+.++.++++.+..+...|+
T Consensus 411 ~~~-----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 411 NLG-----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccC-----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 643 236899999999999999988877777555444 5667777888888887777666554
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.99 E-value=0.011 Score=61.66 Aligned_cols=154 Identities=14% Similarity=0.121 Sum_probs=108.3
Q ss_pred HHHHHHHhHh-hcCChhHHH-HHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCc
Q 008934 38 PNMILYLCRE-YNMETTAAT-NIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPAC 115 (548)
Q Consensus 38 ~~l~~yl~~~-lg~s~~~ag-~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 115 (548)
|++..|+.+. .|++..|.. -+.-+++-......++...+.|. +|.|.+++++.+...+...++....
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 6899999987 999999887 55666777777888899999998 5999999998887777766666655
Q ss_pred ccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 116 DQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVY 195 (548)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~ 195 (548)
+...+-+..+.-|++.+. -.+..+++=..+|+ ++-.++.++.....-+|-.++..++-.
T Consensus 93 -------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~-------~~yq~vts~~raa~l~g~~~s~~lgQl 151 (412)
T PF01770_consen 93 -------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDK-------EHYQKVTSYTRAATLVGRFISSLLGQL 151 (412)
T ss_pred -------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677777777766665 34444555555554 335666777666666776777666665
Q ss_pred hhh--ccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 196 IQD--NLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 196 l~~--~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+.. ..++...+++......+++++.++.
T Consensus 152 lvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 152 LVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 554 3457777777766666666654443
No 240
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.86 E-value=7.8e-05 Score=80.13 Aligned_cols=164 Identities=15% Similarity=0.073 Sum_probs=103.4
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY---VGRYRMIGFGCFT 93 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~~~~~~~~ 93 (548)
..+|...+..++.....|++..++|.|+++..|+|..+++.+...+.++..++.+++|+++||. ..+|..+.....+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3456677788889999999999999999987789999999999999999999999999999992 1555555555544
Q ss_pred HHH-HHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 94 CLL-GMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 94 ~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
+.. +...+.... .......+......+.....++......+....+. +|-
T Consensus 353 ~~~~g~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~------k~~ 403 (495)
T KOG2533|consen 353 YAIIGAISLLAAA-----------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT------KAL 403 (495)
T ss_pred HHHHHHHHHHhhc-----------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH------HhH
Confidence 333 323333222 12223332333334444444555555566665433 244
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhhhccCchhhhHHH
Q 008934 173 SYFSWYYVFVSAS-SIVAVTCIVYIQDNLGWKVGFGVP 209 (548)
Q Consensus 173 ~~~~~~~~~~~ig-~~~gp~i~~~l~~~~g~~~~f~i~ 209 (548)
+..+..-.+.+.+ .+.+++.-+.....++|...|.+.
T Consensus 404 ~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 404 TTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred HHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 4444444444433 333443444444556788888443
No 241
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.66 E-value=0.00016 Score=80.80 Aligned_cols=111 Identities=11% Similarity=-0.021 Sum_probs=79.6
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHH--HH-----------hhhcCCCCCc---------------cccc-ccchHH
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAARR--SI-----------AINEGISDDL---------------RAVV-QMSAMW 423 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~~~--~~-----------~~~~~~~~~~---------------~~~~-~~s~~~ 423 (548)
.++++.+.+|.++++++.++.+..+-... +. ...+..+... ++.. ...+..
T Consensus 95 ~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (633)
T TIGR00805 95 LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLL 174 (633)
T ss_pred cCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehh
Confidence 55667889999999999988766531100 00 0000011000 0000 113455
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008934 424 QLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDI 483 (548)
Q Consensus 424 ~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~ 483 (548)
++++-++.|+|++...+....++.+.+|++.|+.+.|+.+....+|..+|+.+.+.+.+.
T Consensus 175 ~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 175 FLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred hHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 678999999999999999999999999999999999999999999999999999887653
No 242
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.0018 Score=70.75 Aligned_cols=192 Identities=15% Similarity=0.105 Sum_probs=104.7
Q ss_pred CcchHHHHHHHHHHHHHH-HHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Q 008934 15 GLRTLPFIIANEAFERMA-TVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFT 93 (548)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~ 93 (548)
.+|.........++..++ +..+..+.+.. -+..|.+... .+...+..+...++..++.++.||+ |||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i-f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTI-FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHH-HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 345555555555555444 44455555555 5566666543 4455556667777778889999996 999999999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHH
Q 008934 94 CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQS 173 (548)
Q Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 173 (548)
+.++.++++.......... ..........+....+....-..+..|....+.+|.+|. +.|++
T Consensus 369 m~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~-------~~r~~ 431 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYP----------NSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL-------RLRSK 431 (513)
T ss_pred HHHHHHHHHHHHHHhccCC----------CcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH-------hHHhh
Confidence 9999888886542111000 000111122222222223333333345666788999998 44777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHH-HHHhcCCc
Q 008934 174 YFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSAL-SFFLASPF 226 (548)
Q Consensus 174 ~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~-~~~~~~~~ 226 (548)
+.++......+...+-......+.+..++...|...+....+... ..++..|+
T Consensus 432 ~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pE 485 (513)
T KOG0254|consen 432 GASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPE 485 (513)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEccc
Confidence 777755444333332222222222332334556555555444444 34444444
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.62 E-value=0.00095 Score=71.93 Aligned_cols=125 Identities=10% Similarity=0.071 Sum_probs=87.4
Q ss_pred hhhhhcCCCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhh
Q 008934 362 LASKIKGKPCQL-SLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMI 440 (548)
Q Consensus 362 ~~~~~~~~~~~~-~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~ 440 (548)
..+.+.|| . ++++.+.+|.++.+++.+.+.... .+...+.....+..+|.++..+
T Consensus 64 igG~LaDR---ilGrrr~iliG~il~~lg~lll~~~~---------------------~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 64 LGGFLADK---VLGNRMAVMLGALLMAIGHVVLGASE---------------------IHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred HHHHHHHH---ccCcHHHHHHHHHHHHHHHHHHHHhh---------------------cchhHHHHHHHHHHHhcccccc
Confidence 34445555 5 667788899999888876554321 0122344455566677788778
Q ss_pred hhhhhcccccCch--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 008934 441 GQTEFYYTELPKS--MSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFL 518 (548)
Q Consensus 441 ~~~~~~~~~~P~~--~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~ 518 (548)
...+++.+..|++ +|+.+.++.+...++|+.++|.+.+.+.... ++++.|...++.++++++
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~----------------Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY----------------SWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------ChHHHHHHHHHHHHHHHH
Confidence 7888888888875 7999999999999999999999999875321 246677777666677766
Q ss_pred HHHHhhhc
Q 008934 519 YYLACCKA 526 (548)
Q Consensus 519 ~~~~~~~~ 526 (548)
.++...++
T Consensus 184 ~~~~~~~~ 191 (493)
T PRK15462 184 IFLCGNRH 191 (493)
T ss_pred HHHHhhhh
Confidence 66544433
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.62 E-value=0.13 Score=54.42 Aligned_cols=390 Identities=14% Similarity=0.046 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 008934 20 PFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMV 99 (548)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~ 99 (548)
+.+....++.+..-=+.-.-.++|+.+-+.=+.--+...-.+-.+...+..+.-|...||. -|.|++..+++..-++..
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHHH
Confidence 4444445555555445556677787766654555555555666777788889999999996 999999998887555433
Q ss_pred HHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHH-HHhccccccchhhhhhccCCCCCCCccchhhHHHHHHH
Q 008934 100 LLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLM-SLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWY 178 (548)
Q Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 178 (548)
+....-.......+. ...+......++....+. .+..=.......+.=-|++..-.+++ +..+.+..+..
T Consensus 84 ~s~~~~~~l~~~~~~--------~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~-~~~La~~NA~m 154 (432)
T PF06963_consen 84 ASCALFLLLLSYPSS--------SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGD-PGALARMNATM 154 (432)
T ss_pred HHHHHHHHHHhCCcc--------ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCC-hhhHHHHHHHH
Confidence 332211000000000 000011111222221122 12221222222233334433211101 14466666554
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcC-------CceeccCCCCCCchhHHHHHHHHHhhc
Q 008934 179 YVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLAS-------PFYVKSKANTSLLPGLTQVLVASFKNR 251 (548)
Q Consensus 179 ~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (548)
.-.=.+.-++||.+.|.+.+..|......+.++.-+++...=++.. |+...+++.++....
T Consensus 155 RRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~------------ 222 (432)
T PF06963_consen 155 RRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS------------ 222 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc------------
Confidence 4444678899999999998888877776666555555544222111 221111111000000
Q ss_pred cCCCCCcchhhhhhcCCCCcccCCcchhhhHHhhhhhcCCCCCCCCCCCCCCCCccchHHHH--HHHH-HHHHH------
Q 008934 252 RTKLPTQATEEMYHHGKGSMRLMPSENLRFLNKACMAKHPEQDLTPDGRASNPNSLCTVEQV--EELK-ALIKA------ 322 (548)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~------ 322 (548)
+ +.+ +...... .. ....-+...... ....|..|..|.+ ...- .++..
T Consensus 223 -----~-~~~---~~~~~~~--~~-~~~~~~~~~~~~------------~~~~w~~Y~~q~vflas~alalLY~TVLsf~ 278 (432)
T PF06963_consen 223 -----S-DEE---SSSESSS--DP-SILKRLWNPLRT------------IIRGWRTYFRQPVFLASFALALLYFTVLSFG 278 (432)
T ss_pred -----c-ccc---ccccccc--hh-hHHHHHHHHHHH------------HhccHHHHHhCHHHHHHHHHHHHHHHHhcCc
Confidence 0 000 0000000 00 000000000000 0012222221110 0000 00000
Q ss_pred hhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 323 SSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRS 402 (548)
Q Consensus 323 ~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~ 402 (548)
..+..++ .+-++++..+..+-.+..+. .+...+++|.+.| | .++.+--.+++.....+.......--
T Consensus 279 ~lmt~yl-~~~G~s~~~igi~R~~gav~--Gl~gT~~~p~l~~---r---iGlvr~G~~~l~~q~~~L~~~v~~~~---- 345 (432)
T PF06963_consen 279 GLMTAYL-KSQGYSPSVIGIFRGLGAVF--GLLGTWVYPWLMK---R---IGLVRAGLWSLWWQWVCLALCVVSFW---- 345 (432)
T ss_pred HHHHHHH-HHCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH---H---hcchhhHHHHHHHHHHHHHHHHHHHh----
Confidence 0000000 01124444444443333222 2334446666654 3 55556666676665555544332210
Q ss_pred HhhhcCCCCCcccc-cccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 403 IAINEGISDDLRAV-VQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIM 477 (548)
Q Consensus 403 ~~~~~~~~~~~~~~-~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~ 477 (548)
. . +.+ ...+...++.+.++.=+|--......+-+..+.+|+++||..+|+-+..+++-..+--.++
T Consensus 346 -~-------~-~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 346 -A-------P-GSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred -c-------C-CCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 111 2346667777888888888888999999999999999999999999998888877655553
No 245
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.55 E-value=0.0014 Score=71.69 Aligned_cols=163 Identities=11% Similarity=0.021 Sum_probs=116.2
Q ss_pred CccccccCCCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChh---HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008934 3 TEPLLINKNPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETT---AATNIIFIWTAATNFLPIVGALLADS 79 (548)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~ag~i~~~~~~~~~~~~~~~G~laDr 79 (548)
++|+.+.+..+. .|.+...+.+.++..+.+|++..+.|......++-++. +++++...+.++..++.++.|.+..+
T Consensus 297 ~~Pl~P~~Lf~~-~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ 375 (599)
T PF06609_consen 297 KDPLFPHRLFKD-RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK 375 (599)
T ss_pred CCCcCCHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH
Confidence 467777665543 46777777888999999999999999888888877663 67888888888899999999999987
Q ss_pred cccchHHH-HHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhcc
Q 008934 80 YVGRYRMI-GFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQ 158 (548)
Q Consensus 80 ~~Grk~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~ 158 (548)
. +|-|-. +++..+++++..+++... |. +....+...++.|+|.|...........-.
T Consensus 376 i-r~~Kw~li~~~~~~ta~~Gama~~~--~~-------------------n~~~~i~~~~l~g~giG~~~~~~~~~~ql~ 433 (599)
T PF06609_consen 376 I-RHIKWQLIFGSVLMTAFCGAMAAVR--PD-------------------NKNAAIAFLVLAGFGIGGILVPAIVIAQLI 433 (599)
T ss_pred c-cchhHHHHHHHHHHHHHHHHHHHcc--CC-------------------CcchHHHHHHHHHHhHHHHHHHHHHeeEee
Confidence 5 775544 567667766555555432 11 222233445677788888766666665555
Q ss_pred CCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 159 LDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVY 195 (548)
Q Consensus 159 ~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~ 195 (548)
.|+++ .+.+.++......+|+.+|..+-.-
T Consensus 434 ~p~~~-------ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 434 VPDED-------IGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred eCchH-------HHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 66633 8999999888889998888765443
No 246
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.53 E-value=4.6e-07 Score=96.86 Aligned_cols=184 Identities=14% Similarity=0.152 Sum_probs=111.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++++.+..++.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444445444444444455555667777777 2233344455667777888999995 9999999998887777
Q ss_pred HHHHH-HhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhcc-ccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 98 MVLLW-STTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSG-GIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 98 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
...+. .....+. .....+.. .++...+...+.+ +..+....+.+|.+|.+. |+++.
T Consensus 330 ~~~~~~~~~~~~~--------------~~~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~-------R~~~~ 387 (451)
T PF00083_consen 330 SLILGIIFFLGVS--------------SSSWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKV-------RSTGI 387 (451)
T ss_pred ccccccccccccc--------------cccccccc-cceeeeeccccccccccccccccccccccccc-------ccccc
Confidence 66664 1110010 00000111 1222222222222 334566688899999954 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCc
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 226 (548)
++.+....+++.++|.+...+.+..+-...|.+.+++.++..+..+...|+
T Consensus 388 ~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 388 GLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 999998999999999888888777664555666666555555554444444
No 247
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.50 E-value=0.21 Score=53.58 Aligned_cols=169 Identities=8% Similarity=-0.013 Sum_probs=102.4
Q ss_pred CcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHhhccccchHHHH
Q 008934 15 GLRTLPFIIANEAFERMATVGFTPNMILYLCREYNM-----ETTAATNIIFIWTAATNFL-PIVGALLADSYVGRYRMIG 88 (548)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~-----s~~~ag~i~~~~~~~~~~~-~~~~G~laDr~~Grk~~~~ 88 (548)
.+|.+..+....++-.+.|+..- =+.+.+.. +.....++.+...+.+.+. .++-+++++|+ +|+|++.
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~ 78 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFY 78 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHH
Confidence 35666666666666666665333 24666666 3356667766665665555 78899999996 9999999
Q ss_pred HHHHHHHHHHHHHHHhcccCC--CCCC--CcccccCCCcCCC-----ccchHHHHHHHHHHHHhcccccc-chhhhhhcc
Q 008934 89 FGCFTCLLGMVLLWSTTILPG--AKPP--ACDQLRNGCESAT-----WSQLMPLYFAFGLMSLGSGGIRS-SSLAFGAEQ 158 (548)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~--~~~~--~~~~~~~~~~~~~-----~~~~~~~~i~~~l~g~g~g~~~~-~~~~~~~~~ 158 (548)
+....+.....++++.- .|. ...| .||+.-.+....- ..+.|...+......+=.....+ ..++++.|.
T Consensus 79 ~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi 157 (472)
T TIGR00769 79 TVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 87777776666655442 111 1000 0111100000000 00122222222233333334444 668999999
Q ss_pred CCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 159 LDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ 197 (548)
Q Consensus 159 ~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~ 197 (548)
++.++ -.|.+++++.+.|+|.++++.+..++.
T Consensus 158 ~t~~q-------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 158 TTIDE-------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CCHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99844 688999999999999999999988876
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=97.42 E-value=0.0013 Score=72.23 Aligned_cols=123 Identities=13% Similarity=0.104 Sum_probs=87.6
Q ss_pred hhhhcCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhh
Q 008934 363 ASKIKGKPCQLSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQ 442 (548)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~ 442 (548)
.+.+.+| +++++.+.+|.++.+++.++.+.... + ....+.+.+.+..++.|+|++..++..
T Consensus 81 ~G~L~Dr---~G~R~vllig~ll~~iG~ll~ala~~---------~-------~i~~s~~~l~l~r~l~G~G~~~~~~~~ 141 (591)
T PTZ00207 81 YSFIYDY---LGPRPIFVLSMTVFCLGTLLFALTFQ---------E-------VIEGSVVRLSVYNGLMTLGCMLFDLGA 141 (591)
T ss_pred HHHHHHH---hCcHHHHHHHHHHHHHHHHHHHHHhc---------c-------cccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566 78888999999999999988877520 0 011368888888999999999998888
Q ss_pred hhhcccccCchhhHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 008934 443 TEFYYTELPKSMSSIASTLSGAGLSAANLVASLI-MNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYL 521 (548)
Q Consensus 443 ~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~ 521 (548)
.....+..| +.||.+.|+.....++|+++.+.+ ...+.. +....|++.+++.++..++.+
T Consensus 142 ~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~------------------~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 142 VVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD------------------NTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------hHHHHHHHHHHHHHHHHHHHH
Confidence 888888887 569999999999999999864444 333321 124556666666655544444
Q ss_pred Hh
Q 008934 522 AC 523 (548)
Q Consensus 522 ~~ 523 (548)
..
T Consensus 203 ~~ 204 (591)
T PTZ00207 203 VF 204 (591)
T ss_pred hh
Confidence 43
No 249
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.34 E-value=0.0024 Score=51.12 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=59.1
Q ss_pred HHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhc
Q 008934 37 TPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTT 105 (548)
Q Consensus 37 ~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~ 105 (548)
++.+ +.++++.++|.++++++.+...+++.++.+...++.++. .+++.+..+++...+....+++..
T Consensus 12 TplL-P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 12 TPLL-PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444 466889999999999999999999999999999999995 888999999999888888888765
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.25 E-value=0.3 Score=51.08 Aligned_cols=60 Identities=15% Similarity=0.052 Sum_probs=50.7
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNA 479 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~ 479 (548)
+.|.+++..+..|+-.+.........+.++.|++.|-.++|.....-++|..++..+.-.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 567677777778888888888888888899999999999999999999988888877544
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.23 E-value=0.00039 Score=72.20 Aligned_cols=179 Identities=16% Similarity=0.093 Sum_probs=120.3
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHH--------HHHHHHHHHHH-HHHHHHHHhhccccchHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATN--------IIFIWTAATNF-LPIVGALLADSYVGRYRMI 87 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~--------i~~~~~~~~~~-~~~~~G~laDr~~Grk~~~ 87 (548)
|..+-.....|...+++|+...+...-++ .+|+.+.+.-. ...+...+..+ +-.++.++.|+. |||+.-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 55555666788888999999888877655 55665544333 11222222222 445667789995 999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccc-hHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCc
Q 008934 88 GFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQ-LMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTK 166 (548)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 166 (548)
+.|.+++++....++...+. ++ +... ....-+..++..+|=+ .+.-..-+|.+|.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~~---------------~~-~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FPa----- 437 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYNQ---------------LE-NTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPA----- 437 (538)
T ss_pred HhhHHHHHHHHHHHcCCccc---------------cc-ccCceeehHHHHHHHHhcCCC---ceeEEeehhhchH-----
Confidence 99999998887777643310 11 1111 1222222333333333 3444556889998
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCchhhhHHHHHHHHHHHHHHHhc
Q 008934 167 SKGALQSYFSWYYVFVSASSIVAVTCIVYIQD-----NLGWKVGFGVPAVIMLLSALSFFLA 223 (548)
Q Consensus 167 ~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~-----~~g~~~~f~i~~~~~~i~~~~~~~~ 223 (548)
+.|+...++.....=+|+++|.....++.+ ..|.+.+|++.+.+.+++.+..++.
T Consensus 438 --rvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 438 --RVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred --HHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 569999999999999999999999999988 6788999999988888777765543
No 252
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.13 E-value=0.00044 Score=71.76 Aligned_cols=167 Identities=12% Similarity=0.059 Sum_probs=121.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcc---ccchHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSY---VGRYRMIGFGCFT 93 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~---~Grk~~~~~~~~~ 93 (548)
+....+..+.+.-.+.+-.=..++++|++ ++|.+-.-.+.+-...-+...+.+|+.|..+||. +||||.++....+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 44455555666667777777788999976 8999999888888888889999999999999974 6999988876654
Q ss_pred -HHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhH
Q 008934 94 -CLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQ 172 (548)
Q Consensus 94 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~ 172 (548)
.+++..+...++.+-..+ |++-+ +..-......++++.-+.=+.....+...-++.+|....++. ++|
T Consensus 111 ~i~~~l~Lig~aaDig~~l---gd~~~---~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~----~~~- 179 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL---GDNER---KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK----KTR- 179 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh---cCCcc---cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh----hhc-
Confidence 555666666665443322 22211 111223455667777777788888899999999999987663 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 008934 173 SYFSWYYVFVSASSIVAVTCIVYI 196 (548)
Q Consensus 173 ~~~~~~~~~~~ig~~~gp~i~~~l 196 (548)
+.+++.....+|..+|..++++.
T Consensus 180 -Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 180 -ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred -cchhHHHHHHhcceeeeeccccc
Confidence 89999999999999998877743
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.09 E-value=0.0074 Score=61.53 Aligned_cols=152 Identities=10% Similarity=0.069 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHH-hHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-chHHHHHHHHHHH
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYL-CREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVG-RYRMIGFGCFTCL 95 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~G-rk~~~~~~~~~~~ 95 (548)
+++..+....+.....|....+...++ ...+|+++.|.|-+.+...+...+.+..-....||..| -+-++..++.+..
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 445555555555555555555556665 45799999999998888888888888888888888633 3455566666666
Q ss_pred HHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 96 LGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 96 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
-..+++..+. ....+..+..+-.+..+...++...++....|+++ |+.+.
T Consensus 341 P~~llls~~~-----------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q-------rG~~~ 390 (451)
T KOG2615|consen 341 PAFLLLSLAR-----------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ-------RGTLN 390 (451)
T ss_pred HHHHHHhccc-----------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc-------chHHH
Confidence 6666666544 34568888889999999999999999999999955 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDN 199 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~ 199 (548)
|+......++=++||.++|.+..+
T Consensus 391 Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 391 GIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHHHHHHhhhhhhheeEEE
Confidence 999999999999999999887653
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.80 E-value=0.014 Score=62.34 Aligned_cols=128 Identities=16% Similarity=0.183 Sum_probs=106.7
Q ss_pred HHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHH-HHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCccc
Q 008934 39 NMILYLCREYNMETTAATNIIFIWTAATNFLPIVGA-LLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQ 117 (548)
Q Consensus 39 ~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G-~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 117 (548)
.+..|+...+++++.+.+...+..+....+++.+.. .+.-. +|-|+++..|++...+.....+++.
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------ 329 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------ 329 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc------------
Confidence 447788889999999999999999999999998888 66666 6999999999999999999999876
Q ss_pred ccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 118 LRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ 197 (548)
Q Consensus 118 ~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~ 197 (548)
+.|.......+. ...+...|...++++.+.++++ +++++++......+.++++|.+-+.+.
T Consensus 330 -----------~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~e-------~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 -----------ETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPEE-------QGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred -----------cchhhhHHHHHH-HhhcchhHHHHhHHHhhccccc-------ccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 555656655444 4445668999999999999855 899999999999999999999877665
Q ss_pred h
Q 008934 198 D 198 (548)
Q Consensus 198 ~ 198 (548)
.
T Consensus 391 ~ 391 (463)
T KOG2816|consen 391 A 391 (463)
T ss_pred H
Confidence 3
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.72 E-value=0.056 Score=48.85 Aligned_cols=106 Identities=10% Similarity=0.172 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHH
Q 008934 59 IFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFG 138 (548)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 138 (548)
..+......+..+++..+.++ +|.|+.+.+|.+.+.+-..... -. +.+.++++-+
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~-~~-----------------------~~~~l~~~s~ 97 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFF-YP-----------------------NSYTLYPASA 97 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH-hh-----------------------hHHHHHHHHH
Confidence 444555566666778888898 5999999999988776433332 22 5678899999
Q ss_pred HHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008934 139 LMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYI 196 (548)
Q Consensus 139 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l 196 (548)
+.|+|.+..+.+...++.+..+++ +|++-.+++....+.+.++|..+.-.+
T Consensus 98 l~G~~~a~lW~aqg~ylt~~s~~~-------~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 98 LLGFGAALLWTAQGTYLTSYSTEE-------TIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHhhhhHHhhHhhhHHHHHcCCHH-------HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998877763 377888887777777777776554443
No 256
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.60 E-value=0.016 Score=60.34 Aligned_cols=183 Identities=15% Similarity=0.071 Sum_probs=106.0
Q ss_pred chHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLL 96 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~ 96 (548)
+++.+++....+....+|+....+-.- ...-|++...+|++.....++++++..++|.++||...-|+++++......+
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~-l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v 344 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLA-LCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALV 344 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhc-cccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH
Confidence 445555555555555555554444322 2245777789999999999999999999999999973445555555555444
Q ss_pred H-HHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHH
Q 008934 97 G-MVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYF 175 (548)
Q Consensus 97 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 175 (548)
+ +.+...+. .+ ...+.+.....+.|....+..|.-.-+..|..=|..+ +.-.
T Consensus 345 ~~~~l~~~t~-~~-------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSs 397 (480)
T KOG2563|consen 345 GTLMLLTCTL-FL-------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSS 397 (480)
T ss_pred HHHHHHHhhc-cC-------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccc
Confidence 4 22332222 11 1334455556677777777788888777776544332 3344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccC---chh-hhHHHHHHHHHHHHHHHhcCCce
Q 008934 176 SWYYVFVSASSIVAVTCIVYIQDNLG---WKV-GFGVPAVIMLLSALSFFLASPFY 227 (548)
Q Consensus 176 ~~~~~~~~ig~~~gp~i~~~l~~~~g---~~~-~f~i~~~~~~i~~~~~~~~~~~~ 227 (548)
|+.....++-+++-..+-+...+.++ |.. .-+.......+.+++..+.++.+
T Consensus 398 Gll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 398 GLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred eeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 55555556555555556666666555 333 33333344444444444444443
No 257
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.43 E-value=0.71 Score=47.45 Aligned_cols=156 Identities=15% Similarity=0.166 Sum_probs=89.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhh-----ccccchHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLAD-----SYVGRYRMIG 88 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laD-----r~~Grk~~~~ 88 (548)
+..+.+..+++..++...-+ |...-+|..++ .-|.|-++.+.... ...=.-.-+++..+.| |+ ||||..+
T Consensus 28 ~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~fS~--ay~P~sLKllWaPiVDs~y~k~~-GrrksWv 102 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIFSF--AYWPFSLKLLWAPIVDSVYSKRF-GRRKSWV 102 (510)
T ss_pred hhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhhhh--hhhHHHHHHHHHhhhHHHHHHhh-cccccee
Confidence 33466777777777776654 45555555544 77888887764432 2233345677888888 85 9999766
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccc
Q 008934 89 FGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSK 168 (548)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (548)
+=. -+.+|.....++.-.+..+.+. .+..+...+....++..+..+.---++-.....+..+++
T Consensus 103 vp~-q~llG~~mllLs~~v~~~~g~n----------g~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~----- 166 (510)
T KOG3574|consen 103 VPC-QYLLGLFMLLLSYLVDRGLGGN----------GGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN----- 166 (510)
T ss_pred eeh-HHHHHHHHHHHhhCCCcccccC----------CCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh-----
Confidence 522 2223333343333222211110 011123333334555666666666667777777777744
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 169 GALQSYFSWYYVFVSASSIVAVTC 192 (548)
Q Consensus 169 ~~r~~~~~~~~~~~~ig~~~gp~i 192 (548)
.+.+......+.+.|..+|..+
T Consensus 167 --lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 167 --LGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred --cCchhHHHHHHHhhhHHhhcce
Confidence 6777777777778887777654
No 258
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.40 E-value=0.16 Score=55.47 Aligned_cols=149 Identities=13% Similarity=-0.004 Sum_probs=91.0
Q ss_pred HhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCC
Q 008934 46 REYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESA 125 (548)
Q Consensus 46 ~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (548)
..+|.+..-...+... .........+.+.|+. |||.....+.++..++.+...... .
T Consensus 346 ~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~---~---------------- 402 (521)
T KOG0255|consen 346 SGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLP---D---------------- 402 (521)
T ss_pred hhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhh---c----------------
Confidence 3455554433333222 4445555668999996 999999999999888888887654 1
Q ss_pred CccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhh
Q 008934 126 TWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVG 205 (548)
Q Consensus 126 ~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~ 205 (548)
..+.+...+...+...+.+........+.+|.+|+ ..|..+.+.......+|++++|.+...... +.....
T Consensus 403 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt-------~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~ 473 (521)
T KOG0255|consen 403 -DLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPT-------VVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLG 473 (521)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccch
Confidence 00111222223333344444445558888999998 459999999999999999999987655544 333334
Q ss_pred hHHHHHHHHHHHHHHHhcCCc
Q 008934 206 FGVPAVIMLLSALSFFLASPF 226 (548)
Q Consensus 206 f~i~~~~~~i~~~~~~~~~~~ 226 (548)
+.+.+....+..++.....|+
T Consensus 474 ~~~~~~~~~l~~~~~~~~lpe 494 (521)
T KOG0255|consen 474 LILFGWLALLLGLLSLLLLPE 494 (521)
T ss_pred HHHHHHHHHHHHHHHHhcCcc
Confidence 333333333444333344443
No 259
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.13 E-value=0.081 Score=56.45 Aligned_cols=135 Identities=13% Similarity=0.103 Sum_probs=87.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchh
Q 008934 375 LKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSM 454 (548)
Q Consensus 375 ~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~ 454 (548)
-++.+..|.+++.++-++...++.. .+-.-+++.++.++.|+|.+.... .=.++.+..-.+.
T Consensus 101 ~k~Pli~s~ii~~~g~llY~~l~~~-----------------~~~~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~d 162 (488)
T KOG2325|consen 101 VKKPLIVSFLIAIIGNLLYLALAYV-----------------PNGVKYLMLVARILTGVGVGNFAV-LRAYIADASTVED 162 (488)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhc-----------------ccchHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccc
Confidence 3666899999999999988555521 111678899999999999665443 3344445445556
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008934 455 SSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGPF 530 (548)
Q Consensus 455 rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 530 (548)
|-++++..+....+|..+||.+...+..+..++. .+.+. ..=..|...-|+.+++.++.+++..+..++..+.
T Consensus 163 R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~--~i~~~-~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 163 RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGF--MILPG-LIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCce--EEcCc-ceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 7788888888888888888888766654443221 12221 1112345556777777787777777666665443
No 260
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.95 E-value=0.045 Score=57.03 Aligned_cols=124 Identities=7% Similarity=-0.026 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCch---h
Q 008934 378 RMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKS---M 454 (548)
Q Consensus 378 ~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~---~ 454 (548)
.+.+|.++..+|.+++..... + +. .....+.+.+.+++.+.++|.+..-|....+..++.+++ +
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~---------~--~~--~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~ 69 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAI---------P--PS--LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSR 69 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHT---------S--SS--C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTH
T ss_pred hhhHHHHHHHHHHHHhHHHHh---------c--ch--hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhh
Confidence 467788888888888665540 0 00 012234567888999999999999999999999998876 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008934 455 SSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGPF 530 (548)
Q Consensus 455 rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 530 (548)
|..+...+....++|..++..+.+.+.+. -++...|.+.++.++++++.++...+++...
T Consensus 70 ~~~~F~~fY~~in~G~~~~~~~~~~i~~~----------------~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 70 RDSFFNWFYWGINIGSLFSPTLVPYIQQN----------------YGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHC----------------S-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhHHHHHHHHhhhhHhhcccchhhccc----------------cchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 55566777888888888888887776532 1356778888888999988887766665444
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.78 E-value=0.0016 Score=71.08 Aligned_cols=151 Identities=12% Similarity=0.015 Sum_probs=3.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHH----HHhh--------hcCCC----------------CCcccccccchHHH
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAARR----SIAI--------NEGIS----------------DDLRAVVQMSAMWQ 424 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~~~----~~~~--------~~~~~----------------~~~~~~~~~s~~~~ 424 (548)
.++.+++.+|.++++++.++++.-+-... .... .+.+. +...+......+.+
T Consensus 65 ~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 144 (539)
T PF03137_consen 65 GHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVF 144 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHH
Confidence 45568889999999999888755421100 0000 00111 01111122234668
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh----cC--------CCCCCC
Q 008934 425 LPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDIT----KR--------GGNGGW 492 (548)
Q Consensus 425 i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~----~~--------~~~~~~ 492 (548)
+++.++.|+|..-..+-..+++.+.++++..+.+.|+...+..+|-++|-.+.+.+.++. .. +..+.|
T Consensus 145 ~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W 224 (539)
T PF03137_consen 145 ILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW 224 (539)
T ss_dssp -------SSS----------------------------------------------------------------------
T ss_pred HHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH
Confidence 889999999999999999999999999999999999999999999999988887755432 11 112334
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhcccc
Q 008934 493 IPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGP 529 (548)
Q Consensus 493 ~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~ 529 (548)
+ |..+.-|.+.+++.++..+.+..+.|+..+
T Consensus 225 v------GAWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 225 V------GAWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp -------------------------------------
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 3 123333555666666665555555554443
No 262
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.58 E-value=0.08 Score=58.98 Aligned_cols=152 Identities=11% Similarity=0.041 Sum_probs=102.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHH----HHHHhh------hc---------C---C-----CCCcc-cc-ccc-chH
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAA----RRSIAI------NE---------G---I-----SDDLR-AV-VQM-SAM 422 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~----~~~~~~------~~---------~---~-----~~~~~-~~-~~~-s~~ 422 (548)
..+.+.+.+|.++++++.++.+.-+-. ..+... .. + . ..+.. .. .+. .+.
T Consensus 159 ~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 238 (735)
T KOG3626|consen 159 GHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFL 238 (735)
T ss_pred cCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHH
Confidence 455678999999999999888765321 111110 00 0 0 01111 11 122 233
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC---------CCCCCC
Q 008934 423 WQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRG---------GNGGWI 493 (548)
Q Consensus 423 ~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~---------~~~~~~ 493 (548)
.++++.++.|+|+.-.++.+.+++.+.+.++.-..+.|+...++.+|-++|-++.++..++--.. ..+.|+
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWI 318 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWI 318 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchh
Confidence 57889999999999999999999999999999999999999999999999999988765432111 012233
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccccc
Q 008934 494 PSNINKGHYDYYYWLLTALSMANFLYYLACCKAYGPF 530 (548)
Q Consensus 494 ~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~~~ 530 (548)
|..+.-|.+.++++++..+.++++.++..+.
T Consensus 319 ------GAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~ 349 (735)
T KOG3626|consen 319 ------GAWWLGFLICGALLLFSAVPLFFFPKELPKS 349 (735)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHhCcccCccc
Confidence 2234446677788888877777777666543
No 263
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.54 E-value=0.3 Score=44.15 Aligned_cols=85 Identities=14% Similarity=0.095 Sum_probs=69.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK 452 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~ 452 (548)
.++++.+.+|.++..+-....... +.+.+.++.++.|+|.++.++..-.+..+...+
T Consensus 64 lg~K~sm~lg~~~y~~y~~~~~~~-----------------------~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 64 LGPKWSMILGSLGYAIYIASFFYP-----------------------NSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhh-----------------------hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 556678888888877444333221 467789999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008934 453 SMSSIASTLSGAGLSAANLVASLIMNAV 480 (548)
Q Consensus 453 ~~rg~~~g~~~~~~~~g~~lg~~~~~~i 480 (548)
+.+++.+|+++...+.+..+|..+.-.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888875553
No 264
>PRK03612 spermidine synthase; Provisional
Probab=95.38 E-value=1.2 Score=48.78 Aligned_cols=159 Identities=9% Similarity=-0.063 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH--HHHHHHHH-HHH
Q 008934 25 NEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFG--CFTCLLGM-VLL 101 (548)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~--~~~~~~~~-~l~ 101 (548)
..++..++--+.=....-.+..-+|-+..+.+.+++++..+..++..++|+++++- - ++...+- ..+....+ .++
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~-~~~~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-A-AGFVAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-H-HHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555566667899999999999999999999999999887542 2 2222221 11111111 111
Q ss_pred HHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHH
Q 008934 102 WSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVF 181 (548)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 181 (548)
.... +. ............++.++..|+..|....+..+...++ -++..+-.|..
T Consensus 100 ~~~~--~~----------------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~--------~g~~~g~ly~~ 153 (521)
T PRK03612 100 YAAF--AF----------------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH--------LGHNVATVLAA 153 (521)
T ss_pred HHHH--HH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------hhhhhhhhHhH
Confidence 1111 00 0001111223334456666777676666655432211 24456666777
Q ss_pred HHHHHHHHHHHHHHhhh-ccCchhhhHHHHH
Q 008934 182 VSASSIVAVTCIVYIQD-NLGWKVGFGVPAV 211 (548)
Q Consensus 182 ~~ig~~~gp~i~~~l~~-~~g~~~~f~i~~~ 211 (548)
..+|+++|.++.+++.- ..|-....++.+.
T Consensus 154 ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 154 DYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 88888888888776543 5664434433333
No 265
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.18 E-value=0.29 Score=47.89 Aligned_cols=91 Identities=10% Similarity=0.101 Sum_probs=67.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK 452 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~ 452 (548)
.+++..+.+|.++..++..++...- ++ ...+.+.|.+.....+.+.+.+..+........+..|.
T Consensus 63 ~gp~~~l~iG~~~~~~GY~~~~l~~---------~~------~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 63 FGPWVVLLIGAVLGFVGYGLLWLAV---------SG------RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH---------hC------ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 6777788899999998887775443 00 01234678887777788888888777766666677886
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 453 SMSSIASTLSGAGLSAANLVASLIMNA 479 (548)
Q Consensus 453 ~~rg~~~g~~~~~~~~g~~lg~~~~~~ 479 (548)
.||++.|+.-...++++++=+.+...
T Consensus 128 -~RG~vvgilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 128 -SRGTVVGILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred -ccCceehhhhHHHHhHHHHHHHHHHH
Confidence 59999999999999998876665443
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.83 E-value=1.5 Score=46.64 Aligned_cols=138 Identities=12% Similarity=0.009 Sum_probs=100.6
Q ss_pred HhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 008934 34 VGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPP 113 (548)
Q Consensus 34 ~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 113 (548)
-++-..+..|+..+ |+++...|..-+...+....+.....++.+|+ |.-|.=.+++.+......++..+-+.|.-
T Consensus 275 Lsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~--- 349 (432)
T PF06963_consen 275 LSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGS--- 349 (432)
T ss_pred hcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCC---
Confidence 34456788898877 99999999999999999999999999999996 99999999998877766666555433330
Q ss_pred CcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 114 ACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCI 193 (548)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~ 193 (548)
++ +..+...++.+.++-=+|-=+.--+..-++.|.+|+ ++|+...+.-....++.-.+...++
T Consensus 350 ---~~-------~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~-------~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 350 ---PF-------SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPE-------SERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred ---Cc-------hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCH-------HHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 011233333333333355445556778888888888 4499999999888888888776554
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.67 E-value=0.37 Score=51.40 Aligned_cols=118 Identities=21% Similarity=0.176 Sum_probs=76.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccc---c
Q 008934 374 SLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTE---L 450 (548)
Q Consensus 374 ~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~---~ 450 (548)
+++.-+.+|.++.+++...++.... ...+.........+..+|..+........+.+. -
T Consensus 57 rr~~Y~~i~~~~~~~~~~~~~~~~~------------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~ 118 (433)
T PF03092_consen 57 RRKPYMIIGWLLGAVSALVLALLPA------------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARRE 118 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHhccc------------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcC
Confidence 3445567777777666666555430 112444555666777888888887776666555 4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 451 PKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKA 526 (548)
Q Consensus 451 P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~ 526 (548)
|.+ +|..++..+..+.+|+.++..+.|.+.+.. ++...|.+.+.+..+..+....+.++
T Consensus 119 p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 119 PES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred Cch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 555 889999999999999999999988865322 12334666666666665555555554
No 268
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=94.49 E-value=0.93 Score=46.08 Aligned_cols=122 Identities=12% Similarity=0.060 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhH
Q 008934 377 LRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSS 456 (548)
Q Consensus 377 ~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 456 (548)
..+.+|.+..+.+.+++...+ .+|+.-.+|+++..-..+..+.....+......+.-|
T Consensus 304 ~ll~~~s~~~agllf~m~~t~----------------------~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~g 361 (433)
T KOG3810|consen 304 LLLAVGSAVQAGLLFIMAQTQ----------------------HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFG 361 (433)
T ss_pred HHHHHHHHHhhhhhhhhhccc----------------------ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhhe
Confidence 445667777777777777654 6888999999999999998888877777777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008934 457 IASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYG 528 (548)
Q Consensus 457 ~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 528 (548)
...|++.+..- .+=+.++-.+.+..+ --++-...---|...|.+++++.+++..+.+..+++.+
T Consensus 362 LvFGiNTFvAl---~lQsilT~iVvd~~g-----~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~~~ 425 (433)
T KOG3810|consen 362 LVFGINTFVAL---ILQSILTLIVVDDRG-----LGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCRRNK 425 (433)
T ss_pred eeeehHHHHHH---HHHHhheEEEEcccc-----cCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhhcCC
Confidence 88888866433 333333333222111 00000000012556788999999998777665554443
No 269
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=94.31 E-value=0.92 Score=48.32 Aligned_cols=152 Identities=14% Similarity=0.099 Sum_probs=93.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhhccccch-------HHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCC
Q 008934 50 METTAATNIIFIWTAATNFLPIVGALLADSYVGRY-------RMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGC 122 (548)
Q Consensus 50 ~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 122 (548)
+++++.. +.-.+...+..|+-.++--+. +++ .-+-+++++...+.+++.... .-..
T Consensus 324 vp~~~fQ---slNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~-~~~~------------ 386 (498)
T COG3104 324 VPPAWFQ---SLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAG-IWFG------------ 386 (498)
T ss_pred cCHHHHH---hhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHH-Hhhc------------
Confidence 4455444 444445555556666665552 332 234445555555555554431 0000
Q ss_pred cCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH------h
Q 008934 123 ESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVY------I 196 (548)
Q Consensus 123 ~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~------l 196 (548)
...+..+.++++.+.+++++|.=+..|...+++.+..|+ .-.+..++.+......|..++..+.+. .
T Consensus 387 ~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~-------~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~ 459 (498)
T COG3104 387 GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP-------ALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPA 459 (498)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH-------HHHHHHHHHHHHHHHHHHHhhceecccccccchh
Confidence 002234788899999999999999999999999999998 447888888888788887777666552 2
Q ss_pred hhccCchhhhHHHHHHHHHHHHHHHhcCC
Q 008934 197 QDNLGWKVGFGVPAVIMLLSALSFFLASP 225 (548)
Q Consensus 197 ~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 225 (548)
.+.......|+..+...++...++....|
T Consensus 460 ~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 460 YTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 22334556677776665555544444333
No 270
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=93.82 E-value=1.4 Score=49.57 Aligned_cols=132 Identities=12% Similarity=0.057 Sum_probs=87.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCc
Q 008934 373 LSLKLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK 452 (548)
Q Consensus 373 ~~~~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~ 452 (548)
.+..+.+.++.++..++..++++... + .. ...........+..+.++|.+.+-|...++..++.++
T Consensus 51 lG~~~tIl~~~ii~~lG~~llai~a~---------~--~~---~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 51 LGKFKTILYLSIVYVVGHALLSFGAI---------P--SS---GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC---------c--cc---ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 45557778888888888877765320 0 00 0001123355678888999999999999999988765
Q ss_pred h---hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008934 453 S---MSSIASTLSGAGLSAANLVASLIMNAVDDIT-KRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCKAYG 528 (548)
Q Consensus 453 ~---~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~~~~ 528 (548)
+ .+-....++..+.++|+.+++.+.+.+.... ..+.+ ..+...|.+.+++++++++++....++++
T Consensus 117 ~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~----------~~~~~aF~i~~i~m~ia~lvf~~g~k~y~ 186 (654)
T TIGR00926 117 RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQ----------DCYPLAFGVPAILMILALIVFMAGSKMYK 186 (654)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----------cchHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 4 3556777777778888888888877764211 00000 13567788888888888888876665553
No 271
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.20 E-value=7.4 Score=40.92 Aligned_cols=113 Identities=14% Similarity=0.046 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhh
Q 008934 376 KLRMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMS 455 (548)
Q Consensus 376 ~~~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r 455 (548)
+..+..+.+...++..++.+.. +.+++-+.-++.|++.+. -...+++++..+|++.-
T Consensus 71 kpviil~~~~~i~t~~lll~~~----------------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~y 127 (412)
T PF01770_consen 71 KPVIILQALSYIITWLLLLFGT----------------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHY 127 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHC----------------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHH
Confidence 3456667766666676666655 788888888889888776 66678999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhhh
Q 008934 456 SIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINKGHYDYYYWLLTALSMANFLYYLACCK 525 (548)
Q Consensus 456 g~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~~~~~~~~~ 525 (548)
-.+++-.....-+|..++..+...+.... +.+|.....+..+...+++++..++.+
T Consensus 128 q~vts~~raa~l~g~~~s~~lgQllvs~~--------------~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 128 QKVTSYTRAATLVGRFISSLLGQLLVSFG--------------GVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------CCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89998888888888888888877655322 123555545544555555565555543
No 272
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.60 E-value=6.1 Score=38.90 Aligned_cols=139 Identities=10% Similarity=0.081 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccch--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCCCcccccCCCcCCCccchH
Q 008934 55 ATNIIFIWTAATNFLPIVGALLADSYVGRY--RMIGFGCFTCLLGMVLLWSTTI-LPGAKPPACDQLRNGCESATWSQLM 131 (548)
Q Consensus 55 ag~i~~~~~~~~~~~~~~~G~laDr~~Grk--~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (548)
-|.+.+.+.++.++++-+..++..|. ..| ..+.+..++......+..++.+ .|. ..++.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~-----------------kes~~ 345 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSPS-----------------KESPS 345 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCCC-----------------cCCch
Confidence 47888888888888888888887773 433 3444444444444433333332 122 22445
Q ss_pred HHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHH
Q 008934 132 PLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAV 211 (548)
Q Consensus 132 ~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~ 211 (548)
.-+++..+.-.+.|..+|+.+-+=++..|++ +|+..++++..-.|+-.-++....-.-..-.+-|..|-++..
T Consensus 346 ~s~i~F~~~E~cvGlfwPSimkmRsqyIPEe-------arstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~ 418 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIMKMRSQYIPEE-------ARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSA 418 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHhhCCHH-------HHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHH
Confidence 5678888888999999999999999999984 489999998887777654332110000001245677888777
Q ss_pred HHHHHHH
Q 008934 212 IMLLSAL 218 (548)
Q Consensus 212 ~~~i~~~ 218 (548)
...++.+
T Consensus 419 ~~~~a~i 425 (454)
T KOG4332|consen 419 FLFVASI 425 (454)
T ss_pred HHHHHHH
Confidence 6655543
No 273
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.30 E-value=25 Score=37.94 Aligned_cols=59 Identities=12% Similarity=-0.006 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhh-hhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 424 QLPYLVLSGLAMAFNMI-GQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 424 ~i~~~~l~g~g~~~~~~-~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
....|+...+=..++.+ -.+.++.+....++..+..++.....++|..+|+.++..+.+
T Consensus 131 ~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 131 FALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444443333333 567888899999999999999999999999999999887664
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.96 E-value=24 Score=37.72 Aligned_cols=132 Identities=17% Similarity=0.128 Sum_probs=76.7
Q ss_pred hHhhcCChhHHHHHH-HHHHHHHHHHHHHHHHHh---hccccchHHHHHHHHHHHHHHHHHHHhcccCCC--CCCCcccc
Q 008934 45 CREYNMETTAATNII-FIWTAATNFLPIVGALLA---DSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGA--KPPACDQL 118 (548)
Q Consensus 45 ~~~lg~s~~~ag~i~-~~~~~~~~~~~~~~G~la---Dr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~ 118 (548)
+++++.+....-.+. ....++..++..+.+.+. ++ +||++++.++..+..++.++..++. |.- +.+.-
T Consensus 270 t~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~t~--- 343 (461)
T KOG3098|consen 270 TRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRPTD--- 343 (461)
T ss_pred hhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccc--cccCCCCCCc---
Confidence 434554444333222 223333444445555554 55 4889999999998888877776643 210 00000
Q ss_pred cCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 119 RNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTC 192 (548)
Q Consensus 119 ~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i 192 (548)
........+....++.-++.|++-+......+.++++.+|+ + |..+++++-.-..+++.++...
T Consensus 344 --~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~-~-------~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 344 --SPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPD-D-------RAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred --ccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC-c-------hHHHHHHHHHHHHHHHHHHhhh
Confidence 00011111344555666789999999999999999999954 3 5677777666666665554433
No 275
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=85.41 E-value=8.6 Score=40.35 Aligned_cols=62 Identities=10% Similarity=-0.053 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 129 QLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQ 197 (548)
Q Consensus 129 ~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~ 197 (548)
+.|.+++..+..|+..|+.+.+....+.+..|++ +|..+++....+-++|..++..++-++.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~-------~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE-------DREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH-------HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4667777788899999999999999999988774 4899999988888899888877665543
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=84.05 E-value=68 Score=34.79 Aligned_cols=135 Identities=11% Similarity=0.070 Sum_probs=77.8
Q ss_pred ChhHHHHHHHHHHH-HHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCC--CCCCC--cccccCCCcCC
Q 008934 51 ETTAATNIIFIWTA-ATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPG--AKPPA--CDQLRNGCESA 125 (548)
Q Consensus 51 s~~~ag~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~--~~~~~~~~~~~ 125 (548)
++.....+-....+ ...+...+-.+++|++ +|.+++.+....+.....+.++.- .|. .+.|. ++.. +..
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~----~~~ 129 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADKL----LAI 129 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHHh----hhh
Confidence 45555555554434 4455577789999996 999999987776666555555432 121 01010 1100 000
Q ss_pred Ccc---------chHHHHHHHHHHHHhcccccc-chhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 126 TWS---------QLMPLYFAFGLMSLGSGGIRS-SSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVY 195 (548)
Q Consensus 126 ~~~---------~~~~~~i~~~l~g~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~ 195 (548)
... +.|...+...+..+=.....+ .-+.+..|.++.++ -.+.+++++.+.|+|.+++..+..+
T Consensus 130 ~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~e-------AKRfYpl~g~ganigli~sG~~~~~ 202 (491)
T PF03219_consen 130 LPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEE-------AKRFYPLFGLGANIGLIFSGQLTSY 202 (491)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 112222222222222222222 34788888888744 6889999999999999999998888
Q ss_pred hhh
Q 008934 196 IQD 198 (548)
Q Consensus 196 l~~ 198 (548)
+.+
T Consensus 203 ~~~ 205 (491)
T PF03219_consen 203 FSS 205 (491)
T ss_pred HHH
Confidence 877
No 277
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=82.89 E-value=21 Score=34.21 Aligned_cols=62 Identities=13% Similarity=0.043 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCc-hhhHHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPK-SMSSIASTLSGA-GLSAANLVASLIMNAVD 481 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~~g~~lg~~~~~~i~ 481 (548)
+.+.++......|++.+...+.......+..|+ +.|+...+.... ...+|..+++.+.+.+.
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677777778999999999999999999998 678998888888 57788888886666654
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=79.83 E-value=3 Score=44.02 Aligned_cols=128 Identities=10% Similarity=-0.040 Sum_probs=83.3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccc
Q 008934 339 SFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKL-RMGIGLLFSTASMTAWAIVEAARRSIAINEGISDDLRAVV 417 (548)
Q Consensus 339 ~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~iG~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (548)
.++..-++..++..|+.+... +|...| ++++| -+.++.+..+++++.+.+........++++... +-
T Consensus 71 ~iw~~gPi~G~~vQP~vG~~S----Drc~sr---~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~-----~~ 138 (498)
T KOG0637|consen 71 IIWLCGPLSGLLVQPLVGSAS----DRCTSR---YGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKP-----VK 138 (498)
T ss_pred ccccccccccceecccccccc----cccccc---cccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccc-----cc
Confidence 344455666666667654443 333333 33333 357788888899988887763333333333211 22
Q ss_pred ccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHH-HHHHHHHHHHHHHHHHHHHHH
Q 008934 418 QMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSI-ASTLSGAGLSAANLVASLIMN 478 (548)
Q Consensus 418 ~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~-~~g~~~~~~~~g~~lg~~~~~ 478 (548)
.-+....++.+.+.=++--+...+.=++..+.+.++.+-+ +++.+.++-++||.+|=++.+
T Consensus 139 ~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 139 PRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 2345556677777777777777777788888877777777 999999999999998877744
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=78.29 E-value=94 Score=32.68 Aligned_cols=58 Identities=19% Similarity=0.118 Sum_probs=50.2
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIM 477 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~ 477 (548)
+.+|++....++|+..+-...-.+.++.+.+|++.+-.+..+..+.-..|-..|.+++
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 5677888889999999999999999999999999998888888888888888888773
No 280
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=73.42 E-value=38 Score=36.56 Aligned_cols=44 Identities=23% Similarity=0.155 Sum_probs=31.9
Q ss_pred HHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 436 AFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNA 479 (548)
Q Consensus 436 ~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~ 479 (548)
+-...++...+.++..++.+|-++......+..|-+++-.+--.
T Consensus 133 ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFla 176 (544)
T PF13000_consen 133 ATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLA 176 (544)
T ss_pred ccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHh
Confidence 44555566666677788889999988888888888876665433
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=70.59 E-value=38 Score=36.12 Aligned_cols=92 Identities=14% Similarity=0.048 Sum_probs=51.7
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCC
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDDITKRGGNGGWIPSNINK 499 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~~~~~~~~~~~~~~~~~~ 499 (548)
.++..+...++.|++.++.......++...-|+ +++.....+++++.+++.+.-... ....++. +..
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~fp~~-----~~~a~~~G~g~aGv~~s~~~ii~~-a~~~~~~------~~~- 171 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGVFPST-----YSSAVMSGQGLAGVLTSLAMILVK-ASGNDSH------GLK- 171 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcccCCHH-----HHHHHHhcchhHHHHHHHHHHHHH-HhcCCcc------chh-
Confidence 455566677778899999888888888644433 444555666677776665532222 1111110 011
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhh
Q 008934 500 GHYDYYYWLLTALSMANFLYYLACC 524 (548)
Q Consensus 500 ~~~~~~f~~~~~~~~v~~~~~~~~~ 524 (548)
.+...+|....++.+++++.|..+.
T Consensus 172 ~~a~~YF~~a~~v~l~~i~~~~~l~ 196 (437)
T TIGR00939 172 KSALGYFGTPCVVQLICIVCYLLLP 196 (437)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 1123345555666677777766553
No 282
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.92 E-value=35 Score=35.63 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 424 QLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLI 476 (548)
Q Consensus 424 ~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~ 476 (548)
....+.+.-+.-+....+....+.++..++.-|-++.........|.++|..+
T Consensus 136 lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 136 LTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 33344555566666777788888888888889988888777777777776654
No 283
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=69.08 E-value=1.5e+02 Score=30.69 Aligned_cols=27 Identities=19% Similarity=0.100 Sum_probs=21.7
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhc
Q 008934 420 SAMWQLPYLVLSGLAMAFNMIGQTEFY 446 (548)
Q Consensus 420 s~~~~i~~~~l~g~g~~~~~~~~~~~~ 446 (548)
+.+.++.+-++-|++..+.++..-+..
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~ 146 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWM 146 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888999999999888888765554
No 284
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=68.37 E-value=46 Score=35.54 Aligned_cols=57 Identities=12% Similarity=0.106 Sum_probs=42.8
Q ss_pred chHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008934 129 QLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTC 192 (548)
Q Consensus 129 ~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i 192 (548)
+-+..++..++.|+..|-..+....+..+.++++ +|..+-.+.....++|-..|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~-------e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPH-------EREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666788999999998888888888887763 36777777777777777776654
No 285
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.99 E-value=25 Score=29.32 Aligned_cols=42 Identities=10% Similarity=-0.126 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 56 TNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 56 g~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
+.=+++=.+...+....-||+-|||.|-+...++.+.+...+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 344566667777778888999999999988777665554433
No 286
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=55.00 E-value=1.1e+02 Score=31.34 Aligned_cols=117 Identities=14% Similarity=0.025 Sum_probs=63.9
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 12 PKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
+++..|.++.+-...++...+|- -...+......++| ....+.+- ..-....++.+.+..+ +|-|.++.++.
T Consensus 24 ~~~~~knv~i~s~~fl~~f~a~~-gl~nlq~~vn~~lg--~~sl~~~y----~~l~~s~m~~~~~Ir~-~g~K~tm~lav 95 (390)
T KOG3097|consen 24 RLGILKNVLILSIAFLLTFTAYL-GLQNLQTSVNYDLG--TVSLGALY----LSLIDSSMFMPLLIRF-LGTKWTMVLAV 95 (390)
T ss_pred ccchhhhhhHHHHHHHHHHHHHH-HHHHHHHHHhcCcc--cchhhhhh----HHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 34445777766555544444443 33445555444333 22222222 2223334444466666 59999998877
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCC
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLD 160 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~ 160 (548)
..+..- .+.+.-. .+..++.+-...|.|.+..+++--+++++.-.
T Consensus 96 ~~Y~ly-----iA~Nl~p-------------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 96 FPYALY-----IAANLEP-------------------RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHH-----HHhhcch-------------------hHHhhccHHHhhccccccccccCcceecHHHH
Confidence 655442 2221110 34446667777888888888777777665443
No 287
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=51.97 E-value=67 Score=23.08 Aligned_cols=38 Identities=11% Similarity=-0.029 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Q 008934 60 FIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLG 97 (548)
Q Consensus 60 ~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~ 97 (548)
........+.....|+..|++++.++...+...+..+.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34445566677888999999989977666655554443
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=50.59 E-value=99 Score=32.52 Aligned_cols=150 Identities=15% Similarity=0.097 Sum_probs=85.7
Q ss_pred chHHHHHHHHHHHHHHHHhhHH-HHHHHHhHhhcC---ChhHHHHHHHH-HHHHHHHHHHHHHHHhhccccchHHHHHHH
Q 008934 17 RTLPFIIANEAFERMATVGFTP-NMILYLCREYNM---ETTAATNIIFI-WTAATNFLPIVGALLADSYVGRYRMIGFGC 91 (548)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~-~l~~yl~~~lg~---s~~~ag~i~~~-~~~~~~~~~~~~G~laDr~~Grk~~~~~~~ 91 (548)
+.++.-....++.-+-.|.++. ..|-++.+..+- ++.-+..+... +++.-.++.+...++-++ +||+.....+
T Consensus 242 ~~i~~k~~~~~~~i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~ 319 (406)
T KOG1479|consen 242 WDIFKKIKDLAFNIFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVL 319 (406)
T ss_pred HHHHHHHHHHhhchheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHH
Confidence 3344444444444444455544 777777654322 33344445555 788888888888888775 6666655444
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhh
Q 008934 92 FTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGAL 171 (548)
Q Consensus 92 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r 171 (548)
. -.+...++.+++ -|. ++. --++-++.++...++|+..|=..++...+..+.+|+++ +
T Consensus 320 l-R~lfiPlF~~cn-~~~-~~v------------~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e-------~ 377 (406)
T KOG1479|consen 320 L-RLLFIPLFLLCN-YPP-LPV------------VFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE-------K 377 (406)
T ss_pred H-HHHHHHHHHHhc-cCC-CCc------------eecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH-------H
Confidence 3 333344444333 111 110 01134667777888999999998999999999988754 4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 008934 172 QSYFSWYYVFVSASSIVAV 190 (548)
Q Consensus 172 ~~~~~~~~~~~~ig~~~gp 190 (548)
..+-++.......|...|.
T Consensus 378 e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 378 EAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4444444444444544443
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=50.13 E-value=3.3e+02 Score=29.65 Aligned_cols=57 Identities=18% Similarity=0.134 Sum_probs=40.3
Q ss_pred HHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 137 FGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL 200 (548)
Q Consensus 137 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~ 200 (548)
-.+-.+..-....+.+++-++..+|.- =|+.|.+.++..|+|+---..+.-++.|++
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~I-------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAI-------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccc-------chHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 444556666677888899898888855 489999999999999654444444444433
No 290
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=47.87 E-value=29 Score=34.08 Aligned_cols=74 Identities=11% Similarity=0.267 Sum_probs=53.3
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHH---------hhccc
Q 008934 11 NPKGGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALL---------ADSYV 81 (548)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~l---------aDr~~ 81 (548)
++-++|+.+.+-. .-+.+...-....+++.+|++ +.|.++.+..++..+..+.-++..++.|.. .||+
T Consensus 12 kPigr~svf~yGv-GHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~- 88 (412)
T KOG4830|consen 12 KPIGRTSVFAYGV-GHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI- 88 (412)
T ss_pred Ccccceeeeeech-hHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-
Confidence 3455566554433 344455555566788888976 789999999999999999999999998744 5785
Q ss_pred cchHHH
Q 008934 82 GRYRMI 87 (548)
Q Consensus 82 Grk~~~ 87 (548)
|||+..
T Consensus 89 G~~~~w 94 (412)
T KOG4830|consen 89 GRRMSW 94 (412)
T ss_pred cceeee
Confidence 988643
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=47.57 E-value=1.1e+02 Score=31.18 Aligned_cols=357 Identities=11% Similarity=0.022 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhc--------------CChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 008934 18 TLPFIIANEAFERMATVGFTPNMILYLCREYN--------------METTAATNIIFIWTAATNFLPIVGALLADSYVGR 83 (548)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg--------------~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Gr 83 (548)
.+|+ ..+|++.+|..+..-.-.-+.++.+ -.....|.++..=.+-..+..+..-...||+ --
T Consensus 16 ~Fwl---lGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rf-pf 91 (409)
T KOG3880|consen 16 AFWL---LGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRF-PF 91 (409)
T ss_pred HHHH---HHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhc-cc
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHHHHHHhccccccchhhhhhccCCCCC
Q 008934 84 YRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGD 163 (548)
Q Consensus 84 k~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 163 (548)
-.=+.+..++.+.++.+.+++. +.+.-+.+..+.+++.|.--...-++-+..-+.
T Consensus 92 ~~Ri~~~v~~sa~s~~lVafs~-----------------------s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~-- 146 (409)
T KOG3880|consen 92 GFRIALVVLLSALSFFLVAFSN-----------------------SVPMSLLGVVFASISSGLGEITFLALSSRYPSI-- 146 (409)
T ss_pred chHHHHHHHHHhcceEEEEecc-----------------------chhHHHhhhhhhhhcCCcceeehhhhhccCCCc--
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--ccCchhhhHHHHHHHHHHHHHHHhcCCceeccC-CCCCCchhH
Q 008934 164 GTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQD--NLGWKVGFGVPAVIMLLSALSFFLASPFYVKSK-ANTSLLPGL 240 (548)
Q Consensus 164 ~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~--~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~ 240 (548)
..+.+..+...++.+|..-=..+.+ ..+-+....+...+=++....+++..++..... |..++..+
T Consensus 147 ----------~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~- 215 (409)
T KOG3880|consen 147 ----------VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTE- 215 (409)
T ss_pred ----------eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccce-
Q ss_pred HHHHHHHHhhccCCCCCcchhhhhhcCC--CCcccCCcchhh-------hHHhhhhhcCCCCCCCCCCCCCCCCccchHH
Q 008934 241 TQVLVASFKNRRTKLPTQATEEMYHHGK--GSMRLMPSENLR-------FLNKACMAKHPEQDLTPDGRASNPNSLCTVE 311 (548)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (548)
..+++.....-.+++ .++++.....+. ++--.+..+..|+.|-+.....+.+ -|...
T Consensus 216 -------------~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F-~c~~g 281 (409)
T KOG3880|consen 216 -------------IIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLF-PCSHG 281 (409)
T ss_pred -------------eccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEe-ccccC
Q ss_pred HHHHHHHHHHHhhccCCCCCCceecCcccchhhHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCchHHHHHHHHHHHHHHH
Q 008934 312 QVEELKALIKASSMDRHVTPNFEIPSGSFNIFAILTLTIWIGLYDRAVLPLASKIKGKPCQLSLKLRMGIGLLFSTASMT 391 (548)
Q Consensus 312 ~~~~~~~~~~~~~~~~~lg~~~~i~~~~~~~~~~~~ii~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~l~~i~~~ 391 (548)
...+...-+|..++...+|--..-+..-+..+..+..+-. .-.-.++..+.-.
T Consensus 282 ~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~Lai---------------------------lQ~vNl~ff~~~a 334 (409)
T KOG3880|consen 282 FSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAI---------------------------LQFVNLLFFLLQA 334 (409)
T ss_pred CccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHH---------------------------HHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhhhcCCCCCcccccccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHH
Q 008934 392 AWAIVEAARRSIAINEGISDDLRAVVQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANL 471 (548)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~ 471 (548)
+..+.. ++|.+....+.=|+-.+-......--+.++.+++.|=.+++.....-++|-.
T Consensus 335 ~~~ftp----------------------si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~ 392 (409)
T KOG3880|consen 335 WYWFTP----------------------SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIF 392 (409)
T ss_pred HHHhcc----------------------HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHH
Q ss_pred HHHHHH
Q 008934 472 VASLIM 477 (548)
Q Consensus 472 lg~~~~ 477 (548)
++..+.
T Consensus 393 lA~~la 398 (409)
T KOG3880|consen 393 LAGLLA 398 (409)
T ss_pred HHHHHh
No 292
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=47.47 E-value=4e+02 Score=28.87 Aligned_cols=167 Identities=9% Similarity=-0.041 Sum_probs=100.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhHHHHHHHHhHhhcCC---hhHHHHHHHHHHH-HHHHHHHHHHHHhhccccchHHHHH
Q 008934 14 GGLRTLPFIIANEAFERMATVGFTPNMILYLCREYNME---TTAATNIIFIWTA-ATNFLPIVGALLADSYVGRYRMIGF 89 (548)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s---~~~ag~i~~~~~~-~~~~~~~~~G~laDr~~Grk~~~~~ 89 (548)
..+|.+..+.+..+|-.+.++ +.--+.+.+.++ +.....+-+..-+ ++.+..++-+++.+++ .|.+++.+
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~-----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~ 97 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYN-----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYI 97 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHH
Confidence 346777777776666655543 222234444444 4555566555555 5667788999999996 99999998
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCcccc-cC---------CCcCC-----CccchHHHHHHHHHHHHhcccccc-chhh
Q 008934 90 GCFTCLLGMVLLWSTTILPGAKPPACDQL-RN---------GCESA-----TWSQLMPLYFAFGLMSLGSGGIRS-SSLA 153 (548)
Q Consensus 90 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~---------~~~~~-----~~~~~~~~~i~~~l~g~g~g~~~~-~~~~ 153 (548)
-+..+....+++++.- .|. ||-+ ++ .++.. -..+.|..-+...+..+=.....+ .-..
T Consensus 98 ~~~~F~~fF~LFa~Vi-~P~-----~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~ 171 (509)
T COG3202 98 ILGFFLGFFALFAFVI-YPY-----KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQ 171 (509)
T ss_pred HHHHHHHHHHHHHHHH-hcc-----ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877777777654 332 2111 00 00100 000113333322222222222222 3456
Q ss_pred hhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008934 154 FGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDN 199 (548)
Q Consensus 154 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~ 199 (548)
...|..+.++ -.|.++.++.+.|++..++..+..++.++
T Consensus 172 faNeitt~~e-------akRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 172 FANEITTIEE-------AKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHhhhHHH-------hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 7777777744 67899999999999999999888888763
No 293
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=40.59 E-value=1e+02 Score=34.13 Aligned_cols=68 Identities=10% Similarity=0.025 Sum_probs=58.2
Q ss_pred CccchHHHHHHHHHHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 126 TWSQLMPLYFAFGLMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSASSIVAVTCIVYIQDNL 200 (548)
Q Consensus 126 ~~~~~~~~~i~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~gp~i~~~l~~~~ 200 (548)
++.+.++++.-.+++|++.........-+.=+++|+ +-|+.+.+++.....+|..++..+........
T Consensus 454 ~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~-------sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 454 NPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPE-------SMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred CCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456788999999999999999999989999999999 44999999999999999999988886655433
No 294
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=38.80 E-value=5.4e+02 Score=27.92 Aligned_cols=42 Identities=10% Similarity=-0.047 Sum_probs=37.1
Q ss_pred hhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 441 GQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 441 ~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
-.+.++-+..+.++..+.-++.....++|..+++.++..+..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888888999999999999999999999999999888765
No 295
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=38.19 E-value=84 Score=24.55 Aligned_cols=50 Identities=20% Similarity=0.328 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCchhhhHHHHHHHHHHHHHHHhcCCceec
Q 008934 177 WYYVFVSASSIVAVTCIVYIQDNLGWKVGFGVPAVIMLLSALSFFLASPFYVK 229 (548)
Q Consensus 177 ~~~~~~~ig~~~gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~ 229 (548)
+......++++++- +.|++.+ +.+..+++.++..++++++..-.+|.+.+
T Consensus 12 l~~~il~~~~iisf-i~Gy~~q--~~~~~~~~~~~g~~~~~lv~vP~Wp~y~r 61 (76)
T PF06645_consen 12 LMQYILIISAIISF-IVGYITQ--SFSYTFYIYGAGVVLTLLVVVPPWPFYNR 61 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHhheeCCcHhhcC
Confidence 44445666666665 5667766 45667777777666666665555555433
No 296
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.37 E-value=2.4e+02 Score=27.63 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=14.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008934 454 MSSIASTLSGAGLSAANLVASLIMNA 479 (548)
Q Consensus 454 ~rg~~~g~~~~~~~~g~~lg~~~~~~ 479 (548)
+|..+.|+..+..+-.+.+..-..+.
T Consensus 76 i~~iGLglg~liW~s~n~l~Gw~~gr 101 (254)
T PF07857_consen 76 IKTIGLGLGMLIWGSVNCLTGWASGR 101 (254)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 45556666656666555555555444
No 297
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.98 E-value=2.2e+02 Score=23.91 Aligned_cols=33 Identities=9% Similarity=0.029 Sum_probs=25.7
Q ss_pred cCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008934 450 LPKSMSSIASTLSGAGLSAANLVASLIMNAVDD 482 (548)
Q Consensus 450 ~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~~ 482 (548)
.-++.++.++++-...--+++.+..++.|.+.+
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD 67 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLD 67 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678889999888888888888887777654
No 298
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=27.68 E-value=8.2e+02 Score=26.59 Aligned_cols=41 Identities=12% Similarity=-0.012 Sum_probs=33.7
Q ss_pred hhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 441 GQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVD 481 (548)
Q Consensus 441 ~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~ 481 (548)
-.+.++-+....++.....++.++..+++..++..++..+.
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566677788899999999999999999998888877654
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=27.60 E-value=7.5e+02 Score=26.12 Aligned_cols=58 Identities=14% Similarity=0.138 Sum_probs=43.5
Q ss_pred cccchHHHHHHHHHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHH
Q 008934 417 VQMSAMWQLPYLVLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVAS 474 (548)
Q Consensus 417 ~~~s~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~ 474 (548)
..++...+..+....-+|.-+..++..-...+.+|+++|+.+.|+-|..++.=..+--
T Consensus 382 ~~isv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ 439 (503)
T KOG2601|consen 382 SKISVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKD 439 (503)
T ss_pred hhHHHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHH
Confidence 4445555666666666777788888888888889999999999999887776555433
No 300
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=25.92 E-value=4e+02 Score=25.58 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=45.5
Q ss_pred HHHHHHhHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCC
Q 008934 39 NMILYLCREYNMETTAATNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPG 109 (548)
Q Consensus 39 ~l~~yl~~~lg~s~~~ag~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~ 109 (548)
+-...+.+..++|..+.|...+....... ...-.+.+|. +.++....|.+...+|...+..+-.+|.
T Consensus 117 ~S~~l~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~-~~~~p~~LG~~Mi~~GlyfLl~aliiPn 183 (224)
T PF09930_consen 117 FSIMLLAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRL-KKPYPIILGNFMIFLGLYFLLSALIIPN 183 (224)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHh-cCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445577889999999988866555554 6667777784 8677777788877777655533333444
No 301
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=24.63 E-value=3.5e+02 Score=28.16 Aligned_cols=84 Identities=10% Similarity=0.019 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHH
Q 008934 56 TNIIFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYF 135 (548)
Q Consensus 56 g~i~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (548)
|.+-.+..+.++++.+..|++--++ .|.+-++++..-...+-.++..+. +.+.|..+.
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~---------------------t~~Iw~~Ya 331 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQ---------------------TQHIWVCYA 331 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhc---------------------ccceehhhh
Confidence 4455667888889999999998875 776555544443333333333222 236888888
Q ss_pred HHHHHHHhccccccchhhhhhccCCC
Q 008934 136 AFGLMSLGSGGIRSSSLAFGAEQLDK 161 (548)
Q Consensus 136 ~~~l~g~g~g~~~~~~~~~~~~~~~~ 161 (548)
+..+...-+....+....-+++-.++
T Consensus 332 ~yvlfr~~y~l~itiA~~~iA~nL~~ 357 (433)
T KOG3810|consen 332 GYVLFRVIYQLTITIATFQIARNLSS 357 (433)
T ss_pred hHHHHHhhHhhhhhHHHHHHHHhhhh
Confidence 88888888888877777777776665
No 302
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.62 E-value=3.1e+02 Score=22.72 Aligned_cols=30 Identities=10% Similarity=-0.012 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHH
Q 008934 63 TAATNFLPIVGALLADSYVGRYRMIGFGCF 92 (548)
Q Consensus 63 ~~~~~~~~~~~G~laDr~~Grk~~~~~~~~ 92 (548)
.++..+...+.|+.-|+.++-+..+.+.++
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~l 81 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTML 81 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 344455567778888887787654444333
No 303
>PRK03612 spermidine synthase; Provisional
Probab=23.03 E-value=1e+03 Score=26.03 Aligned_cols=52 Identities=13% Similarity=-0.014 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhhhhhhhcccccCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008934 429 VLSGLAMAFNMIGQTEFYYTELPKSMSSIASTLSGAGLSAANLVASLIMNAVD 481 (548)
Q Consensus 429 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~lg~~~~~~i~ 481 (548)
++.++-.+...|-...+..+... +.-|...|-.+....+|+.+|+++.+++.
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 34556666677766555533322 12345566677778888888888888765
No 304
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=22.91 E-value=1.7e+02 Score=20.89 Aligned_cols=10 Identities=40% Similarity=0.371 Sum_probs=5.3
Q ss_pred hhhcccccCC
Q 008934 523 CCKAYGPFKG 532 (548)
Q Consensus 523 ~~~~~~~~~~ 532 (548)
..+++..+..
T Consensus 23 ~~K~ygYkht 32 (50)
T PF12606_consen 23 TLKAYGYKHT 32 (50)
T ss_pred Hhhccccccc
Confidence 3466655543
No 305
>PRK14228 camphor resistance protein CrcB; Provisional
Probab=22.05 E-value=5.1e+02 Score=22.20 Aligned_cols=96 Identities=15% Similarity=-0.050 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCCcccccCCCcCCCccchHHHHHHHH
Q 008934 59 IFIWTAATNFLPIVGALLADSYVGRYRMIGFGCFTCLLGMVLLWSTTILPGAKPPACDQLRNGCESATWSQLMPLYFAFG 138 (548)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laDr~~Grk~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 138 (548)
+.+......+....-+...|+..++...+ --++++.+|+.++++...... +. -.+.
T Consensus 10 v~lGg~~Ga~~Ry~l~~~~~~~~~~~fP~-gTl~vNi~G~fllG~~~~~~~-------------------~~----~~~~ 65 (122)
T PRK14228 10 VMLIGGIGSVLRFLVDRTVARRLARTFPY-GTLAVNVSGAALLGFLAGLAL-------------------PK----DAAL 65 (122)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcH-HHHHHHHHHHHHHHHHHHhcc-------------------CH----HHHH
Confidence 33444444455555555444432322122 234467778777775431100 00 1244
Q ss_pred HHHHhccccccchhhhhhccCCCCCCCccchhhHHHHHHHHHHHHH
Q 008934 139 LMSLGSGGIRSSSLAFGAEQLDKGDGTKSKGALQSYFSWYYVFVSA 184 (548)
Q Consensus 139 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 184 (548)
+.+.|..+..+..+++..|.+.--+. +....+..|...++
T Consensus 66 ~l~tGf~GgfTTFSTf~~e~~~l~~~------~~~~~a~~y~~~s~ 105 (122)
T PRK14228 66 LAGTAFVGAYTTFSTWMLETQRLGEE------RQMRSALANIVVSV 105 (122)
T ss_pred HHHHHHhcchhhHHHHHHHHHHHHHC------CCHHHHHHHHHHHH
Confidence 55667777778888888887764221 33444555554443
No 306
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=21.01 E-value=5e+02 Score=26.62 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc
Q 008934 503 DYYYWLLTALSMANFLYYLACCKAY 527 (548)
Q Consensus 503 ~~~f~~~~~~~~v~~~~~~~~~~~~ 527 (548)
.+.|++..++.++++++|....++.
T Consensus 286 ~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 286 SWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred cHHHHHHHHHHHHHhheEEccCCcc
Confidence 4556666666677776665444333
Done!