Query         008935
Match_columns 548
No_of_seqs    207 out of 2782
Neff          10.8
Searched_HMMs 46136
Date          Thu Mar 28 18:23:53 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008935.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008935hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0158 Cytochrome P450 CYP3/C 100.0 1.7E-80 3.8E-85  601.1  45.7  455   41-533    23-499 (499)
  2 PLN02290 cytokinin trans-hydro 100.0 1.5E-79 3.2E-84  629.8  51.5  490   27-533    20-515 (516)
  3 KOG0156 Cytochrome P450 CYP2 s 100.0 3.3E-78 7.2E-83  595.3  42.9  446   49-532    26-487 (489)
  4 KOG0157 Cytochrome P450 CYP4/C 100.0 1.8E-77 3.9E-82  603.4  43.0  457   47-533    33-496 (497)
  5 PTZ00404 cytochrome P450; Prov 100.0 5.6E-75 1.2E-79  591.3  39.7  450   40-532    20-482 (482)
  6 PLN03234 cytochrome P450 83B1; 100.0 1.5E-74 3.3E-79  590.7  41.6  464   28-532    15-498 (499)
  7 PLN02500 cytochrome P450 90B1  100.0   4E-74 8.7E-79  585.2  43.8  439   49-532    38-489 (490)
  8 PLN02169 fatty acid (omega-1)- 100.0 1.1E-73 2.3E-78  580.0  45.8  452   45-532    27-499 (500)
  9 PLN00110 flavonoid 3',5'-hydro 100.0 7.4E-74 1.6E-78  582.4  43.5  454   45-533    27-497 (504)
 10 PLN02971 tryptophan N-hydroxyl 100.0 2.2E-73 4.9E-78  584.2  45.8  451   49-532    57-533 (543)
 11 PLN02183 ferulate 5-hydroxylas 100.0 1.3E-73 2.7E-78  584.2  42.3  453   49-532    36-511 (516)
 12 PLN03195 fatty acid omega-hydr 100.0 3.9E-73 8.4E-78  581.7  45.8  452   49-533    30-516 (516)
 13 PLN02687 flavonoid 3'-monooxyg 100.0 1.2E-73 2.5E-78  584.6  41.0  450   49-533    34-509 (517)
 14 PLN02394 trans-cinnamate 4-mon 100.0 2.7E-73 5.8E-78  582.1  43.5  463   32-533    21-502 (503)
 15 PLN02738 carotene beta-ring hy 100.0 6.1E-73 1.3E-77  582.1  45.6  475   38-540   104-602 (633)
 16 PLN00168 Cytochrome P450; Prov 100.0 1.4E-72 2.9E-77  577.0  44.6  467   44-534    30-518 (519)
 17 KOG0159 Cytochrome P450 CYP11/ 100.0 6.2E-73 1.4E-77  534.7  38.3  451   50-533    51-518 (519)
 18 PLN02966 cytochrome P450 83A1  100.0 9.6E-73 2.1E-77  576.3  42.2  427   49-509    29-471 (502)
 19 PLN03112 cytochrome P450 famil 100.0 1.4E-72   3E-77  577.9  41.9  452   50-533    33-508 (514)
 20 PLN02774 brassinosteroid-6-oxi 100.0 2.8E-72 6.1E-77  566.9  42.2  426   50-531    32-462 (463)
 21 PF00067 p450:  Cytochrome P450 100.0 2.2E-72 4.7E-77  574.3  36.0  446   51-529     1-463 (463)
 22 PLN02196 abscisic acid 8'-hydr 100.0 3.7E-71 8.1E-76  558.3  42.6  424   49-532    35-462 (463)
 23 PLN02655 ent-kaurene oxidase   100.0 9.6E-71 2.1E-75  556.3  41.6  444   51-533     1-464 (466)
 24 PLN02302 ent-kaurenoic acid ox 100.0 9.7E-70 2.1E-74  555.7  47.6  439   49-533    42-488 (490)
 25 PLN03141 3-epi-6-deoxocathaste 100.0   4E-70 8.7E-75  550.1  38.9  438   49-533     7-450 (452)
 26 PLN02426 cytochrome P450, fami 100.0 1.3E-68 2.7E-73  541.9  47.6  418   90-533    64-500 (502)
 27 PLN03018 homomethionine N-hydr 100.0 5.3E-69 1.1E-73  547.4  44.6  453   49-532    40-523 (534)
 28 PLN02936 epsilon-ring hydroxyl 100.0 1.9E-68 4.2E-73  541.7  42.1  456   52-534    15-483 (489)
 29 PLN02987 Cytochrome P450, fami 100.0 2.2E-68 4.8E-73  535.9  41.3  434   49-533    30-469 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 5.4E-67 1.2E-71  481.6  33.9  439   50-533    32-485 (486)
 31 PLN02648 allene oxide synthase 100.0 3.2E-59   7E-64  465.6  32.0  416   49-511    17-465 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0   7E-56 1.5E-60  436.8  33.0  377   91-532    27-410 (411)
 33 cd01324 cbb3_Oxidase_CcoQ Cyto  66.9      23  0.0005   22.8   5.0   18    1-18      1-18  (48)
 34 COG4459 NapE Periplasmic nitra  65.7      26 0.00056   23.1   4.9    7   50-56     55-61  (62)
 35 PF15050 SCIMP:  SCIMP protein   62.4     7.3 0.00016   30.0   2.4   30   12-41      7-36  (133)
 36 PRK00523 hypothetical protein;  61.4      34 0.00075   24.0   5.3   23   13-35      6-28  (72)
 37 PF12554 MOZART1:  Mitotic-spin  61.1      23 0.00051   22.7   4.1   42  330-371     6-47  (48)
 38 PF12508 DUF3714:  Protein of u  59.3     3.1 6.7E-05   36.3   0.0   44  388-432    51-94  (200)
 39 PHA02681 ORF089 virion membran  56.7     8.9 0.00019   27.3   1.9   18   19-36     10-27  (92)
 40 PRK01844 hypothetical protein;  56.4      48   0.001   23.3   5.3   23   13-35      5-27  (72)
 41 PHA03049 IMV membrane protein;  55.4      18 0.00039   24.7   3.0   18   16-33      6-23  (68)
 42 PHA02902 putative IMV membrane  53.8      25 0.00054   23.8   3.5   18   19-36     10-27  (70)
 43 PF08333 DUF1725:  Protein of u  50.9     7.4 0.00016   19.6   0.6   11    1-11      8-18  (20)
 44 PF08492 SRP72:  SRP72 RNA-bind  50.4      12 0.00025   25.3   1.6    8  452-459    44-51  (59)
 45 PF05952 ComX:  Bacillus compet  48.3      15 0.00033   24.5   1.9   19  352-370     4-22  (57)
 46 PHA02902 putative IMV membrane  47.5      28 0.00062   23.5   3.0   22   18-39      6-27  (70)
 47 PF07219 HemY_N:  HemY protein   43.8      64  0.0014   25.0   5.2   24   18-41     23-46  (108)
 48 PF05545 FixQ:  Cbb3-type cytoc  42.7      90   0.002   20.0   5.3   14   39-52     32-45  (49)
 49 COG3763 Uncharacterized protei  42.1 1.1E+02  0.0025   21.3   5.3   14   40-53     26-39  (71)
 50 PF13625 Helicase_C_3:  Helicas  39.3      84  0.0018   25.3   5.4   42   85-128    73-114 (129)
 51 PRK14750 kdpF potassium-transp  38.0      63  0.0014   17.9   2.9   16   15-30      7-22  (29)
 52 PF11138 DUF2911:  Protein of u  35.7      42 0.00092   27.6   3.1   41  413-455    52-99  (145)
 53 PF05961 Chordopox_A13L:  Chord  34.2      63  0.0014   22.3   3.1   18   16-33      6-23  (68)
 54 TIGR03779 Bac_Flav_CT_M Bacter  33.9      11 0.00023   37.0  -0.7   43  389-432   255-297 (410)
 55 PF09201 SRX:  SRX;  InterPro:   33.7      34 0.00073   27.5   2.1   24  478-501    18-41  (148)
 56 PF06643 DUF1158:  Protein of u  32.8 1.4E+02   0.003   20.9   4.6   13   26-38     67-79  (82)
 57 COG0851 MinE Septum formation   31.4      56  0.0012   24.0   2.7   19  360-378    35-53  (88)
 58 PF15330 SIT:  SHP2-interacting  30.5      43 0.00092   26.0   2.2   10   57-66     46-55  (107)
 59 PF05393 Hum_adeno_E3A:  Human   30.0      73  0.0016   23.3   3.1    9   53-61     63-71  (94)
 60 COG4736 CcoQ Cbb3-type cytochr  29.8 1.8E+02   0.004   19.8   6.0   13    1-14      1-13  (60)
 61 PF04272 Phospholamban:  Phosph  29.6 1.1E+02  0.0025   18.9   3.4   10   19-28     39-48  (52)
 62 TIGR01294 P_lamban phospholamb  29.2 1.3E+02  0.0028   18.7   3.6   10   19-28     39-48  (52)
 63 PF12444 Sox_N:  Sox developmen  28.7      44 0.00095   24.5   1.8   21  488-508    60-80  (84)
 64 KOG3506 40S ribosomal protein   27.7      28  0.0006   22.8   0.6   11  471-481    12-22  (56)
 65 PRK06789 flagellar motor switc  27.4      70  0.0015   22.8   2.6   39  395-433    21-62  (74)
 66 PF13131 DUF3951:  Protein of u  26.8   1E+02  0.0023   19.9   3.0   25   15-39      6-30  (53)
 67 PRK14748 kdpF potassium-transp  26.6 1.2E+02  0.0027   16.8   2.8   17   15-31      7-23  (29)
 68 PF07886 BA14K:  BA14K-like pro  26.5      54  0.0012   18.8   1.6   16  466-481    16-31  (31)
 69 PF10215 Ost4:  Oligosaccaryltr  25.2 1.6E+02  0.0034   17.5   3.9   22    5-26      4-25  (35)
 70 PF10669 Phage_Gp23:  Protein g  24.2   3E+02  0.0065   20.5   5.4   25   16-40     17-41  (121)
 71 PRK03814 oxaloacetate decarbox  24.1 2.7E+02  0.0058   20.6   5.2   13    1-13      2-14  (85)
 72 PF06084 Cytomega_TRL10:  Cytom  23.4      48  0.0011   25.3   1.3   28    6-33     52-80  (150)
 73 PHA02680 ORF090 IMV phosphoryl  22.9 1.6E+02  0.0035   21.6   3.7   28    1-28      1-28  (91)
 74 PF13893 RRM_5:  RNA recognitio  22.5 1.9E+02  0.0041   18.7   4.1   34   93-126     2-39  (56)
 75 PF14129 DUF4296:  Domain of un  22.4 2.7E+02  0.0058   20.5   5.2   50  326-375    29-78  (87)
 76 PF15048 OSTbeta:  Organic solu  21.5      91   0.002   24.7   2.5    9    3-11     19-27  (125)
 77 CHL00145 psaD photosystem I su  21.3 1.1E+02  0.0024   24.1   2.8   55  471-525    43-102 (139)
 78 PF11044 TMEMspv1-c74-12:  Plec  21.2 2.2E+02  0.0048   17.7   3.7   10   22-31     16-25  (49)
 79 PHA03162 hypothetical protein;  20.7      59  0.0013   25.9   1.3   24  474-497     2-25  (135)
 80 PF11227 DUF3025:  Protein of u  20.5      55  0.0012   28.8   1.3   21  434-455   191-211 (212)
 81 PF11120 DUF2636:  Protein of u  20.0 2.6E+02  0.0057   19.2   4.1    9   18-26     10-18  (62)

No 1  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-80  Score=601.10  Aligned_cols=455  Identities=28%  Similarity=0.461  Sum_probs=365.2

Q ss_pred             HHHHHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHH
Q 008935           41 RIEDHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDL  120 (548)
Q Consensus        41 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~  120 (548)
                      +...+|+++++|||+++|++||+..+...            ..   ........|.++ ||++.++.+.+|.++|+|||+
T Consensus        23 ~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~------------~~---~~~~~~~~~~~~-~~~~G~y~~~~p~l~v~D~el   86 (499)
T KOG0158|consen   23 WTYSYWRRRGIPGPKPLPFLGNLPGMLKR------------ER---PGDLLLDIYTKY-RPVVGIYEGRQPALLVSDPEL   86 (499)
T ss_pred             hhhhhhccCCCCCCCCCCcEecHHHHHhc------------cC---cHHHHHHHHhcC-CCEEEEEecCCcceEecCHHH
Confidence            45668888999999999999999998762            10   011234555444 999999999999999999999


Q ss_pred             HHHHHhccCccccCC--cchhhhh-hhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcC
Q 008935          121 IREVFTSKSELYEKN--EANPLVK-QLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKS  197 (548)
Q Consensus       121 v~~i~~~~~~~f~~~--~~~~~~~-~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  197 (548)
                      +++|+.++.++|..+  +.+..-. .+...++++.+|+.||++|..++|.|+..+++++.+.+++.++++++.+.+....
T Consensus        87 ik~I~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~  166 (499)
T KOG0158|consen   87 IKEILIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEG  166 (499)
T ss_pred             HHHHHHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999984  3322222 3445789999999999999999999999999999999999999999999986543


Q ss_pred             CCceeeHHHHHHHHHHHHHhhhHcccccccch----hhHHHHHHHHHHHHHHhH-----HhhcccccccccccccchHHH
Q 008935          198 GSVEVEVSEWFQLLTEDVITRTAFGSSYEDGK----AIFRLQAQQMELAAETFR-----KVFIPGYRFLPTKRNISSWKL  268 (548)
Q Consensus       198 ~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~p~~~~lp~~~~~~~~~~  268 (548)
                      + ..+++.+++.+++.|+|++++||.+.++..    .+..............+.     ...+|.+...- .........
T Consensus       167 ~-~~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l-~~~~~~~~~  244 (499)
T KOG0158|consen  167 G-QEGEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL-RVKLFPEDV  244 (499)
T ss_pred             c-CCccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh-hcccChHHH
Confidence            3 478999999999999999999999876533    222211111111011110     11122221100 111222344


Q ss_pred             HHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccC--C---CC-CCChHHHHHHHHHHHhch
Q 008935          269 DKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSN--S---SS-NITDYDIIEECKSFFFAG  342 (548)
Q Consensus       269 ~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~---~~-~l~~~ei~~~~~~~l~aG  342 (548)
                      .+.+.+.+...++.|...                  ...+.|+++.++++..+  .   .. .+|.+||+++++.|++||
T Consensus       245 ~~~~~~~v~~~v~~R~~~------------------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AG  306 (499)
T KOG0158|consen  245 TDFFRKLVNSRVEQREKE------------------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAG  306 (499)
T ss_pred             HHHHHHHHHHHHHHHHhc------------------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhh
Confidence            455666666666666433                  45688999999998743  1   12 599999999999999999


Q ss_pred             hHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCcccc-C
Q 008935          343 KQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELG-G  421 (548)
Q Consensus       343 ~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~-g  421 (548)
                      .||||++|++++|+||+||++|+|||+||+++..+...+++|.+++|+||++||+||||+||++|.+.|.+++|++++ +
T Consensus       307 feTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~  386 (499)
T KOG0158|consen  307 FETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGG  386 (499)
T ss_pred             hHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCC
Confidence            999999999999999999999999999999997765559999999999999999999999999999999999999999 9


Q ss_pred             EeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhc
Q 008935          422 YKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRF  501 (548)
Q Consensus       422 ~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f  501 (548)
                      +.||||+.|.++.+++||||++| |||++|+||||.+++.. ..++.+|+|||.|||+|+|.+||.+|+|+.|++||++|
T Consensus       387 ~~i~kG~~V~Ip~~alH~Dp~~~-p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f  464 (499)
T KOG0158|consen  387 FVIPKGTPVMIPTYALHHDPEYW-PEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNF  464 (499)
T ss_pred             eEeCCCCEEEeecccccCCcccC-CCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999999999999999999 99999999999987543 45789999999999999999999999999999999999


Q ss_pred             eeEeCCCCccCCce---eEEeccCCCceeEEeeCC
Q 008935          502 SFRLAPSYQHAPTV---LMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       502 ~~~~~~~~~~~~~~---~~~~~p~~~~~v~~~~r~  533 (548)
                      +++..+........   ++++.|++|+++++++|+
T Consensus       465 ~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  465 SFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             EEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence            99998743332222   578899999999999984


No 2  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.5e-79  Score=629.77  Aligned_cols=490  Identities=37%  Similarity=0.679  Sum_probs=389.2

Q ss_pred             HHHHHHhHHhcchHHHHHHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCC-CCCCCCcchhhhhhHHHHHHHHhCCeEEE
Q 008935           27 LVLKVAKGLWWTPRRIEDHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQ-PMPCSHNILPRVLSFYHHWKKIYGGTFLV  105 (548)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~yG~i~~~  105 (548)
                      +++..+..+++.+++...++++++||||+++|++||+.++.........+ .....+++.++....+.+|+++|||+|.+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~   99 (516)
T PLN02290         20 VAYDTISCYFLTPRRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIY   99 (516)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEE
Confidence            34444556788899999999999999999999999999886421111000 00002222334445678999999999999


Q ss_pred             eeCCccEEEecCHHHHHHHHhccCccccCCcch--hhhhhhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHH
Q 008935          106 WFGPTVRLAVSDPDLIREVFTSKSELYEKNEAN--PLVKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKS  183 (548)
Q Consensus       106 ~~~~~~~vvv~dpe~v~~i~~~~~~~f~~~~~~--~~~~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~  183 (548)
                      ++|+.+.|+++||+.+++++.++ ..+..++..  .....+.|.++++.+|+.|+++|+++++.|+.++++.+.+.+.++
T Consensus       100 ~~g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~  178 (516)
T PLN02290        100 WNGTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVEC  178 (516)
T ss_pred             ccCCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHH
Confidence            99999999999999999999876 334443321  122334578889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCceeeHHHHHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhccccccccccccc
Q 008935          184 VTDMLDKWVAMSKSGSVEVEVSEWFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNI  263 (548)
Q Consensus       184 ~~~l~~~l~~~~~~~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~  263 (548)
                      ++++++.|.+..+.++..+|+.+++..++++++++++||.+++..++....................+|++.++|....+
T Consensus       179 ~~~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~  258 (516)
T PLN02290        179 TKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNR  258 (516)
T ss_pred             HHHHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHH
Confidence            99999999865433335799999999999999999999998865554444443333322222222234544555543334


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccC---CCCCCChHHHHHHHHHHHh
Q 008935          264 SSWKLDKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSN---SSSNITDYDIIEECKSFFF  340 (548)
Q Consensus       264 ~~~~~~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~l~~~ei~~~~~~~l~  340 (548)
                      +.....+.+.+++.+.++++++....        .    .......|+++.+++...+   ++..++++++.+++.++++
T Consensus       259 ~~~~~~~~~~~~~~~~i~~~~~~~~~--------~----~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~  326 (516)
T PLN02290        259 EIKSLKGEVERLLMEIIQSRRDCVEI--------G----RSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFF  326 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc--------c----cCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHh
Confidence            45556778888888888887653110        0    0012346899999875432   2234889999999999999


Q ss_pred             chhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCcccc
Q 008935          341 AGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELG  420 (548)
Q Consensus       341 aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~  420 (548)
                      ||+|||+++++|++|+|++||++|+|+++||+++++.+ .++++++++||||+|||+||||++|+++.++|.+.+|++++
T Consensus       327 AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~  405 (516)
T PLN02290        327 AGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLG  405 (516)
T ss_pred             hhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeEC
Confidence            99999999999999999999999999999999999854 78999999999999999999999999998999999999999


Q ss_pred             CEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHh
Q 008935          421 GYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQR  500 (548)
Q Consensus       421 g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~  500 (548)
                      ||.||||+.|+++.+++||||++||+||++|+||||+++.   ......|+|||.|+|.|+|++||++|+++++++|+++
T Consensus       406 g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~---~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~  482 (516)
T PLN02290        406 DLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRP---FAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISK  482 (516)
T ss_pred             CEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCC---CCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999996699999999999542   1234579999999999999999999999999999999


Q ss_pred             ceeEeCCCCccCCceeEEeccCCCceeEEeeCC
Q 008935          501 FSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       501 f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  533 (548)
                      |++++.++....+...++..|+++++|++++|+
T Consensus       483 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        483 FSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ceEeeCCCcccCccceeeecCCCCCeEEEEeCC
Confidence            999998775444445678999999999999985


No 3  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.3e-78  Score=595.29  Aligned_cols=446  Identities=26%  Similarity=0.431  Sum_probs=365.9

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      +.||||+++|++||++++...                 .++..+++|.++|||||++|+|+.++|||+|++.++|+|.++
T Consensus        26 ~lPPGP~~lPiIGnl~~l~~~-----------------~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~   88 (489)
T KOG0156|consen   26 NLPPGPPPLPIIGNLHQLGSL-----------------PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQ   88 (489)
T ss_pred             CCCcCCCCCCccccHHHcCCC-----------------chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhC
Confidence            479999999999999988541                 355689999999999999999999999999999999999999


Q ss_pred             CccccCCcc-hhhhhhhc--CCceeec-CCchHHhhhhhcC-CCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceee
Q 008935          129 SELYEKNEA-NPLVKQLE--GDGLLSL-KGEKWAHHRKIIT-PTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVE  203 (548)
Q Consensus       129 ~~~f~~~~~-~~~~~~~~--g~~l~~~-~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  203 (548)
                      ...|+.|+. ......+.  +.+++++ +|+.|+.+||+.. ..++...+++....-.++++.+++.+.+ .+.+ ..||
T Consensus        89 d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~-~~vd  166 (489)
T KOG0156|consen   89 DLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKG-EPVD  166 (489)
T ss_pred             CccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCC-ceee
Confidence            999999975 22334333  3677777 8999999999986 4578888888888889999999999987 3333 6999


Q ss_pred             HHHHHHHHHHHHHhhhHcccccccch-h----hHHHHHHHHHHHHHHhHHhhcc-ccccccc--ccccchHHHHHHHHHH
Q 008935          204 VSEWFQLLTEDVITRTAFGSSYEDGK-A----IFRLQAQQMELAAETFRKVFIP-GYRFLPT--KRNISSWKLDKQIKRS  275 (548)
Q Consensus       204 l~~~~~~~~~~ii~~~~fG~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~p-~~~~lp~--~~~~~~~~~~~~l~~~  275 (548)
                      +...+..++.++|++++||.+++..+ +    +...+.+..+.........++| ++.+++.  ...++......++..+
T Consensus       167 l~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~  246 (489)
T KOG0156|consen  167 LSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEF  246 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999997632 2    3333444444444444555677 4555552  2334555555668999


Q ss_pred             HHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCC-CChHHHHHHHHHHHhchhHhHHHHHHHHH
Q 008935          276 LTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSN-ITDYDIIEECKSFFFAGKQTTSNLLTWTT  354 (548)
Q Consensus       276 l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~-l~~~ei~~~~~~~l~aG~dtta~~l~~~l  354 (548)
                      +.++|+++++..            .    .....|+++.+++...++... +++++|.+.+.++++||+|||++++.|++
T Consensus       247 ~~~~i~eh~~~~------------~----~~~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~  310 (489)
T KOG0156|consen  247 LERIIDEHREKI------------G----DEEGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAM  310 (489)
T ss_pred             HHHHHHHHHhhh------------c----cCCCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence            999999988751            0    112279999999986653333 99999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCCCEEEec
Q 008935          355 VLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRGTELLIP  433 (548)
Q Consensus       355 ~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG~~v~~~  433 (548)
                      .+|++||++|+|+++||++++|.++.++.+|+.+||||+|||+|++|++|++|. ++|.+++|+.|+||.|||||.|+++
T Consensus       311 a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn  390 (489)
T KOG0156|consen  311 AELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVN  390 (489)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEe
Confidence            999999999999999999999988889999999999999999999999999997 7899999999999999999999999


Q ss_pred             ccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCC
Q 008935          434 ILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAP  513 (548)
Q Consensus       434 ~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~  513 (548)
                      .|++||||++| +||++|+||||++++ +.......++|||.|+|.|||..+|++++.++++.|+++|+|+++++ ....
T Consensus       391 ~~ai~rDp~vw-~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~  467 (489)
T KOG0156|consen  391 LWAIHRDPKVW-EDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDM  467 (489)
T ss_pred             ehhhhcCCccC-CCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCC
Confidence            99999999999 899999999999974 11225778999999999999999999999999999999999999876 2211


Q ss_pred             ce-eEEeccCCCceeEEeeC
Q 008935          514 TV-LMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       514 ~~-~~~~~p~~~~~v~~~~r  532 (548)
                      .. .++...+.++.+...+|
T Consensus       468 ~e~~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  468 EEAGLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             cccccceecCCcceeeeecC
Confidence            11 13334444555554444


No 4  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.8e-77  Score=603.38  Aligned_cols=457  Identities=36%  Similarity=0.607  Sum_probs=374.3

Q ss_pred             HhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHh
Q 008935           47 SKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFT  126 (548)
Q Consensus        47 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~  126 (548)
                      +.+.+|||+++|++|++.++...            .   ..+..++.++..+||++|+.|+|+.+.++++||+.+++|+.
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~   97 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKP------------L---EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILK   97 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcc------------h---hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHh
Confidence            44589999999999999998652            1   35667899999999999999999999999999999999997


Q ss_pred             ccCccccCCcchh-hhhhhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeHH
Q 008935          127 SKSELYEKNEANP-LVKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEVS  205 (548)
Q Consensus       127 ~~~~~f~~~~~~~-~~~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~  205 (548)
                      +......+.+.+. .+..++|+|+++.+|+.|+++||+++++|+.+.++.+...+.+.+..++..+..... +. .+|+.
T Consensus        98 ~~~~~~~k~~~~~~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~-~vd~~  175 (497)
T KOG0157|consen   98 SSNENYPKGPDYPESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAAS-GE-EVDLQ  175 (497)
T ss_pred             cCcccCCCchhHHHHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-CC-eEcHH
Confidence            6556676665555 788899999999999999999999999999999999999999999998887776432 22 39999


Q ss_pred             HHHHHHHHHHHhhhHccccc-c-cchhhHHHHHHHHHHHHHHhHHhhcc-cccccccc-cccchHHHHHHHHHHHHHHHH
Q 008935          206 EWFQLLTEDVITRTAFGSSY-E-DGKAIFRLQAQQMELAAETFRKVFIP-GYRFLPTK-RNISSWKLDKQIKRSLTKLIE  281 (548)
Q Consensus       206 ~~~~~~~~~ii~~~~fG~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~lp~~-~~~~~~~~~~~l~~~l~~~i~  281 (548)
                      +.++++++|++|.++||... + +..+......+..............| +..++... ..++.+++.+.+.+.+.++|.
T Consensus       176 ~~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~  255 (497)
T KOG0157|consen  176 DLLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIR  255 (497)
T ss_pred             HHHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999222 2 22222233333332222233334455 33333322 457778899999999999999


Q ss_pred             HHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCc
Q 008935          282 KRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHP  361 (548)
Q Consensus       282 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p  361 (548)
                      +|+++....        .. +. .....|+++.+.....   ..+++++|.+++.+|++||+||||++++|+++.|+.||
T Consensus       256 ~rr~~~~~~--------~~-~~-~~~~~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP  322 (497)
T KOG0157|consen  256 ERREELEKE--------GS-GE-EKKRLDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHP  322 (497)
T ss_pred             HHHHHHHhc--------CC-cc-cchhhhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCH
Confidence            888742100        00 00 1345788885333222   47999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCC-CCHHhhccChhHHHHHHHHhcCCCCccccceeecCCcccc-CEeeCCCCEEEeccccccc
Q 008935          362 HWQVLAREEVLRVCGSRDL-PTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELG-GYKIPRGTELLIPILAVHH  439 (548)
Q Consensus       362 ~~~~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~-g~~ipkG~~v~~~~~~~~~  439 (548)
                      ++|+++++|+++++++... .+....++|+||++||+||||||||+|.+.|.+.+|++++ ||.||||+.|.++++++||
T Consensus       323 ~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r  402 (497)
T KOG0157|consen  323 EVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHR  402 (497)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhcc
Confidence            9999999999999985433 3444444799999999999999999999999999999995 8999999999999999999


Q ss_pred             CCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEe
Q 008935          440 DQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLL  519 (548)
Q Consensus       440 d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  519 (548)
                      |+++||+||++|+||||++++.....++++|+|||+|+|.|+|++||++|+|+++++++++|+|++..+..+.+....++
T Consensus       403 ~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l  482 (497)
T KOG0157|consen  403 DPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTL  482 (497)
T ss_pred             CccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEE
Confidence            99999779999999999976544455689999999999999999999999999999999999999987765777788999


Q ss_pred             ccCCCceeEEeeCC
Q 008935          520 YPQYGAPIIFQHLP  533 (548)
Q Consensus       520 ~p~~~~~v~~~~r~  533 (548)
                      +|++|++|++++|.
T Consensus       483 ~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  483 RPKNGLKVKLRPRG  496 (497)
T ss_pred             EecCCeEEEEEeCC
Confidence            99999999999995


No 5  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=5.6e-75  Score=591.25  Aligned_cols=450  Identities=21%  Similarity=0.319  Sum_probs=350.2

Q ss_pred             HHHHHHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHH
Q 008935           40 RRIEDHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPD  119 (548)
Q Consensus        40 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe  119 (548)
                      .+++++.+++.+|||+++|++||+..+..                  ++..++.+|+++||++|++++|+.++|+++||+
T Consensus        20 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~   81 (482)
T PTZ00404         20 YKKYKKIHKNELKGPIPIPILGNLHQLGN------------------LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPI   81 (482)
T ss_pred             HHHhhhccCCCCCCCCCCCeeccHhhhcc------------------cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHH
Confidence            34445566789999999999999977633                  244588999999999999999999999999999


Q ss_pred             HHHHHHhccCccccCCcchhhh-hhhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 008935          120 LIREVFTSKSELYEKNEANPLV-KQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSG  198 (548)
Q Consensus       120 ~v~~i~~~~~~~f~~~~~~~~~-~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  198 (548)
                      .+++++.++...|.+++..... ...++.|+++.+|+.|+++|++++++|++++++.+.+.+.+.++++++.|.+... .
T Consensus        82 ~~~~il~~~~~~~~~r~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-~  160 (482)
T PTZ00404         82 LIREMFVDNFDNFSDRPKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIES-S  160 (482)
T ss_pred             HHHHHHHhcchhhcCCCCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHh-c
Confidence            9999998765677765433222 2234788899999999999999999999999999999999999999999976433 2


Q ss_pred             CceeeHHHHHHHHHHHHHhhhHcccccccchh-----hHHHHHHHHHHHHHHh---HHhhcccccccccccccchHHHHH
Q 008935          199 SVEVEVSEWFQLLTEDVITRTAFGSSYEDGKA-----IFRLQAQQMELAAETF---RKVFIPGYRFLPTKRNISSWKLDK  270 (548)
Q Consensus       199 ~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~p~~~~lp~~~~~~~~~~~~  270 (548)
                      +..+|+.+++.+++++++++++||.+++..++     ...........+....   ...+++++............+..+
T Consensus       161 ~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (482)
T PTZ00404        161 GETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFK  240 (482)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHH
Confidence            34689999999999999999999998753211     1111111111111110   001111111100001112234455


Q ss_pred             HHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHH
Q 008935          271 QIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLL  350 (548)
Q Consensus       271 ~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l  350 (548)
                      .+.+++.+.++++++..            .    .....|+++.++++..+. .+.+.+++++++..+++||+|||++++
T Consensus       241 ~~~~~~~~~i~~~~~~~------------~----~~~~~dll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l  303 (482)
T PTZ00404        241 KIKKFIKEKYHEHLKTI------------D----PEVPRDLLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSL  303 (482)
T ss_pred             HHHHHHHHHHHHHHHcc------------C----CCCcccHHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHH
Confidence            66666666666554421            0    123468999999874321 122334588999999999999999999


Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccc-cCEeeCCCC
Q 008935          351 TWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVEL-GGYKIPRGT  428 (548)
Q Consensus       351 ~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l-~g~~ipkG~  428 (548)
                      +|++|+|++||++|+|+++||+++++..+.++++++++||||+|||+||||+||++|. ++|.+.+|+++ +||.||||+
T Consensus       304 ~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt  383 (482)
T PTZ00404        304 EWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDA  383 (482)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCC
Confidence            9999999999999999999999999876678999999999999999999999999997 68999999999 999999999


Q ss_pred             EEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCC
Q 008935          429 ELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPS  508 (548)
Q Consensus       429 ~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~  508 (548)
                      .|.++.+++||||++| |||++|+||||+++.     .+..|+|||+|+|.|+|++||++|+++++++|+++|++++.++
T Consensus       384 ~V~~~~~a~hrdp~~~-~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~  457 (482)
T PTZ00404        384 QILINYYSLGRNEKYF-ENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDG  457 (482)
T ss_pred             EEEeeHHHhhCCcccc-CCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCC
Confidence            9999999999999999 999999999998642     4578999999999999999999999999999999999998765


Q ss_pred             CccC--CceeEEeccCCCceeEEeeC
Q 008935          509 YQHA--PTVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       509 ~~~~--~~~~~~~~p~~~~~v~~~~r  532 (548)
                      .+..  .....+..| ++++|++++|
T Consensus       458 ~~~~~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        458 KKIDETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             CCCCcccccceeecC-CCceeeeecC
Confidence            4322  223455565 5899999987


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.5e-74  Score=590.67  Aligned_cols=464  Identities=22%  Similarity=0.334  Sum_probs=360.7

Q ss_pred             HHHHHhHHhcchHHHHHHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEee
Q 008935           28 VLKVAKGLWWTPRRIEDHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWF  107 (548)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~  107 (548)
                      +++++++.+.++.+        .||||+++|++||+.++..             .    ++..++.+|+++||++|++++
T Consensus        15 ~~~~~~~~~~~~~~--------~pPgp~~~P~iG~~~~~~~-------------~----~~~~~~~~~~~~yG~~~~~~l   69 (499)
T PLN03234         15 AFFFLRSTTKKSLR--------LPPGPKGLPIIGNLHQMEK-------------F----NPQHFLFRLSKLYGPIFTMKI   69 (499)
T ss_pred             HHHHHHHhcCCCCC--------CCcCCCCCCeeccHHhcCC-------------C----CccHHHHHHHHHcCCeEEEEe
Confidence            34445544544443        7999999999999877632             0    233578999999999999999


Q ss_pred             CCccEEEecCHHHHHHHHhccCccccCCcchhhhhh--hcCCce-eecCCchHHhhhhhc-CCCCCHHHHhhhHHHHHHH
Q 008935          108 GPTVRLAVSDPDLIREVFTSKSELYEKNEANPLVKQ--LEGDGL-LSLKGEKWAHHRKII-TPTFHMENLKLLVPVVAKS  183 (548)
Q Consensus       108 ~~~~~vvv~dpe~v~~i~~~~~~~f~~~~~~~~~~~--~~g~~l-~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~  183 (548)
                      |+.++|+++|||++++++.++...|.+++.......  ..+.++ +...++.|+++|+.+ .+.|+++++..+.+.+.+.
T Consensus        70 g~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~  149 (499)
T PLN03234         70 GGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEE  149 (499)
T ss_pred             cCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHH
Confidence            999999999999999999987778888764433222  123333 335678999999975 6899999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCceeeHHHHHHHHHHHHHhhhHcccccccchh-hHHHHHHHHHHH---HHHhHHhhccccccccc
Q 008935          184 VTDMLDKWVAMSKSGSVEVEVSEWFQLLTEDVITRTAFGSSYEDGKA-IFRLQAQQMELA---AETFRKVFIPGYRFLPT  259 (548)
Q Consensus       184 ~~~l~~~l~~~~~~~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~p~~~~lp~  259 (548)
                      ++++++.|.+...+ +..+|+.+++..++++++++++||.+++..+. ............   ........+|++.+++.
T Consensus       150 ~~~ll~~l~~~~~~-~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  228 (499)
T PLN03234        150 CQRMMDKIYKAADQ-SGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDN  228 (499)
T ss_pred             HHHHHHHHHHhccC-CCeEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhh
Confidence            99999999765433 44799999999999999999999998865322 111111111111   00111122343332221


Q ss_pred             --ccccchHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCC--CCCChHHHHHHH
Q 008935          260 --KRNISSWKLDKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSS--SNITDYDIIEEC  335 (548)
Q Consensus       260 --~~~~~~~~~~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~l~~~ei~~~~  335 (548)
                        ...++..++.+.+.+++.++++++.+...           .    .....|+++.+++...+++  ..++++++.+++
T Consensus       229 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------~----~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~  293 (499)
T PLN03234        229 LTGLSARLKKAFKELDTYLQELLDETLDPNR-----------P----KQETESFIDLLMQIYKDQPFSIKFTHENVKAMI  293 (499)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----------c----CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHH
Confidence              12345667888888999999887654310           0    1234689998887643321  358999999999


Q ss_pred             HHHHhchhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCcccc-ceeec
Q 008935          336 KSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIAT-IRRAK  414 (548)
Q Consensus       336 ~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~  414 (548)
                      .++++||+|||+++++|++|+|++||++|+++++|+++++++.+.++++++++|||++|||+|+||++|++|.. .|.+.
T Consensus       294 ~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~  373 (499)
T PLN03234        294 LDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETI  373 (499)
T ss_pred             HHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccC
Confidence            99999999999999999999999999999999999999998777789999999999999999999999999984 79999


Q ss_pred             CCccccCEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCccccc--ccCCCccccccCCCCcCccchHHHHHHHHH
Q 008935          415 ADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVAR--AAKHPVGFIPFGLGVRTCVGQNLAILQTKL  492 (548)
Q Consensus       415 ~d~~l~g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~  492 (548)
                      +|++++||.|||||.|.++.+++||||++||+||++|+||||+++...  ....+..|+|||+|+|.|+|+++|++|+++
T Consensus       374 ~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~  453 (499)
T PLN03234        374 ADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEI  453 (499)
T ss_pred             CCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHH
Confidence            999999999999999999999999999999779999999999975322  122366899999999999999999999999


Q ss_pred             HHHHHHHhceeEeCCCCc---cC--CceeEEeccCCCceeEEeeC
Q 008935          493 ALAIILQRFSFRLAPSYQ---HA--PTVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       493 ~l~~ll~~f~~~~~~~~~---~~--~~~~~~~~p~~~~~v~~~~r  532 (548)
                      ++|+|+++|+|++.++..   ..  ...+.+..|+..+.+.+++|
T Consensus       454 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        454 PFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             HHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            999999999999987632   11  22345556777777777776


No 7  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4e-74  Score=585.18  Aligned_cols=439  Identities=22%  Similarity=0.307  Sum_probs=343.0

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      +.||||+++|++||+..+....          .+   ..+.+++.+|.++||++|.+++|++++|+++||+++++++.++
T Consensus        38 ~~PPgp~~~PiiGn~~~~~~~~----------~~---~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~  104 (490)
T PLN02500         38 NLPPGNMGWPFLGETIGYLKPY----------SA---TSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNE  104 (490)
T ss_pred             CCCCCCcCCCchhhHHHHHhhc----------cc---CChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCC
Confidence            3688999999999987654310          01   1345678999999999999999999999999999999999887


Q ss_pred             CccccCCcchhhhhhhcC-CceeecCCchHHhhhhhcCCCCCHHHHhh-hHHHHHHHHHHHHHHHHHhhcCCCceeeHHH
Q 008935          129 SELYEKNEANPLVKQLEG-DGLLSLKGEKWAHHRKIITPTFHMENLKL-LVPVVAKSVTDMLDKWVAMSKSGSVEVEVSE  206 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~~  206 (548)
                      +..|.++... ....++| .++++.+|+.|+++|+++++.|+..+++. +.+.+.+.+..+++.|..     +..+|+.+
T Consensus       105 ~~~f~~~~~~-~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~vd~~~  178 (490)
T PLN02500        105 GRLFECSYPR-SIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKE-----NSTFSAQD  178 (490)
T ss_pred             CCeEEeeCch-HHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC-----CCCEEehH
Confidence            6667544221 2223344 47888899999999999999999999887 567888888887777642     23689999


Q ss_pred             HHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhc
Q 008935          207 WFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRKAN  286 (548)
Q Consensus       207 ~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~  286 (548)
                      .+.+++++++++++||.+.++.+ ............ ....  ..+  ..+|....++..++.+.+.+++.++++++++.
T Consensus       179 ~~~~~~~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~-~~~~--~~~--~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~  252 (490)
T PLN02500        179 EAKKFTFNLMAKHIMSMDPGEEE-TEQLKKEYVTFM-KGVV--SAP--LNFPGTAYRKALKSRATILKFIERKMEERIEK  252 (490)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchH-HHHHHHHHHHHH-hhhh--cch--hcCCCcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998764321 111111111111 1110  011  12333334555667788888888888877653


Q ss_pred             CCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHH
Q 008935          287 GNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVL  366 (548)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~  366 (548)
                      ...        .    .......|+++.+++.     ..++++++.+++.++++||+|||+++++|++|+|++||++|+|
T Consensus       253 ~~~--------~----~~~~~~~d~l~~ll~~-----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~k  315 (490)
T PLN02500        253 LKE--------E----DESVEEDDLLGWVLKH-----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQE  315 (490)
T ss_pred             hhc--------c----cCCCCcchHHHHHHhc-----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHH
Confidence            110        0    0011346899999874     3589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-----CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEecccccccCC
Q 008935          367 AREEVLRVCGS-----RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQ  441 (548)
Q Consensus       367 lr~Ei~~~~~~-----~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d~  441 (548)
                      +++||+++++.     ++.++++++++|||++|||+||||++|++|.++|.+++|++++||.||||+.|+++.|++||||
T Consensus       316 l~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp  395 (490)
T PLN02500        316 LREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDS  395 (490)
T ss_pred             HHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCc
Confidence            99999998742     3458999999999999999999999999999889999999999999999999999999999999


Q ss_pred             CCccCCCCCCCCCCCCccccccc------CCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCce
Q 008935          442 AIWGSEANDFNPARFSEGVARAA------KHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTV  515 (548)
Q Consensus       442 ~~~g~dp~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  515 (548)
                      ++| +||++|+||||++++....      ..+.+|+|||+|+|.|+|++||++|+++++++|+++|+|++.++....+..
T Consensus       396 ~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~~  474 (490)
T PLN02500        396 SLY-DQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAFP  474 (490)
T ss_pred             ccC-CCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceecc
Confidence            999 9999999999997532111      245789999999999999999999999999999999999998765443322


Q ss_pred             eEEeccCCCceeEEeeC
Q 008935          516 LMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       516 ~~~~~p~~~~~v~~~~r  532 (548)
                        ...+.+|++|++++.
T Consensus       475 --~~~~~~~l~~~~~~~  489 (490)
T PLN02500        475 --FVDFPKGLPIRVRRI  489 (490)
T ss_pred             --cccCCCCceEEEEeC
Confidence              335557999999863


No 8  
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.1e-73  Score=579.96  Aligned_cols=452  Identities=23%  Similarity=0.309  Sum_probs=353.5

Q ss_pred             HHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEE---EeeCCccEEEecCHHHH
Q 008935           45 HFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFL---VWFGPTVRLAVSDPDLI  121 (548)
Q Consensus        45 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~---~~~~~~~~vvv~dpe~v  121 (548)
                      +|+++++|||+++|++||+..+...            ..   ...+.+.+...+||..+.   +++|+.++++|+||+.+
T Consensus        27 ~~~~~~~p~p~~~pl~G~~~~~~~~------------~~---~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i   91 (500)
T PLN02169         27 HKKPHGQPILKNWPFLGMLPGMLHQ------------IP---RIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNI   91 (500)
T ss_pred             HhccCCCCCCCCCCcccchHHHHHc------------cC---cHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHH
Confidence            4556689999999999999877541            11   233455555566887665   57899999999999999


Q ss_pred             HHHHhccCccccCCcchhhhhhhcCCceeecCCchHHhhhhhcCCCCCHHHHhh--hHHHHHHHHHHHHHHHHHhhcCCC
Q 008935          122 REVFTSKSELYEKNEANPLVKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKL--LVPVVAKSVTDMLDKWVAMSKSGS  199 (548)
Q Consensus       122 ~~i~~~~~~~f~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~--~~~~i~~~~~~l~~~l~~~~~~~~  199 (548)
                      ++|+.++...|.++..+.....+.|+|+++++|+.|+++||+++++|+...+..  +.+.+.+.++.+++.+.+... ++
T Consensus        92 ~~il~~~~~~~~k~~~~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~  170 (500)
T PLN02169         92 HHILSSNFGNYPKGPEFKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH-EN  170 (500)
T ss_pred             HHHHhhCcccCCCcHHHHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence            999988777788875444445567899999999999999999999999987764  346777888888888876543 34


Q ss_pred             ceeeHHHHHHHHHHHHHhhhHcccccccch------hhHHHHHHHHHHHHHHhHHhhcccc-----cccccccccchHHH
Q 008935          200 VEVEVSEWFQLLTEDVITRTAFGSSYEDGK------AIFRLQAQQMELAAETFRKVFIPGY-----RFLPTKRNISSWKL  268 (548)
Q Consensus       200 ~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~-----~~lp~~~~~~~~~~  268 (548)
                      ..+|+.+.+.++++|++++++||.+.+..+      ++..........   .....+.|++     .+++....++..++
T Consensus       171 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  247 (500)
T PLN02169        171 IIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEA---IYYRHFKPVILWRLQNWIGIGLERKMRTA  247 (500)
T ss_pred             CeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHH---HHhHHhccHHHHHHHHHhCCchhhHHHHH
Confidence            479999999999999999999998764311      222222211111   1111222321     12233344566788


Q ss_pred             HHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCC---CCCCChHHHHHHHHHHHhchhHh
Q 008935          269 DKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNS---SSNITDYDIIEECKSFFFAGKQT  345 (548)
Q Consensus       269 ~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~l~~~ei~~~~~~~l~aG~dt  345 (548)
                      .+.+.+++.++|++|++....        ..   +.+....|+++.+++...++   ...++++++.+++.++++||+||
T Consensus       248 ~~~~~~~~~~~I~~r~~~~~~--------~~---~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dT  316 (500)
T PLN02169        248 LATVNRMFAKIISSRRKEEIS--------RA---ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDT  316 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHhhc--------cc---cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhH
Confidence            889999999999887653100        00   00122468999998764321   12478899999999999999999


Q ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccc-cCEee
Q 008935          346 TSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVEL-GGYKI  424 (548)
Q Consensus       346 ta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~i  424 (548)
                      |+++++|++|+|++||++|+|+++||++++      +++++++||||+|||+||||+||++|.+.|.+.+|.++ +||.|
T Consensus       317 Ta~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~I  390 (500)
T PLN02169        317 TSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKV  390 (500)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEE
Confidence            999999999999999999999999998864      67999999999999999999999999988888777665 89999


Q ss_pred             CCCCEEEecccccccCCCCccCCCCCCCCCCCCccccccc-CCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhcee
Q 008935          425 PRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAA-KHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSF  503 (548)
Q Consensus       425 pkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~  503 (548)
                      |||+.|.++.|++||||++||+||++|+||||++++.... ..+.+|+|||+|+|.|+|++||++|+++++++|+++|+|
T Consensus       391 pkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~  470 (500)
T PLN02169        391 DAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDF  470 (500)
T ss_pred             CCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEE
Confidence            9999999999999999999988999999999997533211 236789999999999999999999999999999999999


Q ss_pred             EeCCCCccCCceeEEeccCCCceeEEeeC
Q 008935          504 RLAPSYQHAPTVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       504 ~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  532 (548)
                      ++.++.........+++|++|++|++++|
T Consensus       471 ~~~~~~~~~~~~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        471 KVIEGHKIEAIPSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEcCCCCcccccceEEecCCCEEEEEEeC
Confidence            99866554445567889999999999987


No 9  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=7.4e-74  Score=582.36  Aligned_cols=454  Identities=21%  Similarity=0.313  Sum_probs=360.0

Q ss_pred             HHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHH
Q 008935           45 HFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREV  124 (548)
Q Consensus        45 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i  124 (548)
                      ++..+.||||+++|++||++.+..                  .+..++.+|+++||+||++++|+.++|+++||++++++
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~v   88 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLLGN------------------MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAF   88 (504)
T ss_pred             cccCCCcccCCCCCeeechhhcCC------------------chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHH
Confidence            344467999999999999865522                  23458999999999999999999999999999999999


Q ss_pred             HhccCccccCCcchhhhh-hhc--CCceeecCCchHHhhhhhcCC-CCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCc
Q 008935          125 FTSKSELYEKNEANPLVK-QLE--GDGLLSLKGEKWAHHRKIITP-TFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSV  200 (548)
Q Consensus       125 ~~~~~~~f~~~~~~~~~~-~~~--g~~l~~~~g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  200 (548)
                      +.+....|.+++...... ...  +.++++.+|+.|+++|+.+++ .|++++++.+.+.+.++++.+++.+.+...+ +.
T Consensus        89 l~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~-g~  167 (504)
T PLN00110         89 LKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQR-GE  167 (504)
T ss_pred             HHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccC-CC
Confidence            998767888775433221 222  246777889999999999985 7999999999999999999999998765433 45


Q ss_pred             eeeHHHHHHHHHHHHHhhhHcccccc-c-c---hhhHHHHHHHHHHHHHHhHHhhcccccccccc-cccchHHHHHHHHH
Q 008935          201 EVEVSEWFQLLTEDVITRTAFGSSYE-D-G---KAIFRLQAQQMELAAETFRKVFIPGYRFLPTK-RNISSWKLDKQIKR  274 (548)
Q Consensus       201 ~vdl~~~~~~~~~~ii~~~~fG~~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~-~~~~~~~~~~~l~~  274 (548)
                      .+|+.+++..++++++++++||.++. . .   +++..................++|++.+++.. ..++..+..+.+.+
T Consensus       168 ~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~  247 (504)
T PLN00110        168 PVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDK  247 (504)
T ss_pred             cEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHH
Confidence            78999999999999999999998762 1 1   22223222222211111112334544443321 12334455677777


Q ss_pred             HHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccC-CCCCCChHHHHHHHHHHHhchhHhHHHHHHHH
Q 008935          275 SLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSN-SSSNITDYDIIEECKSFFFAGKQTTSNLLTWT  353 (548)
Q Consensus       275 ~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~  353 (548)
                      ++.+.++++.+...           .    .....|+++.+++...+ ++..++++++.++++.+++||+|||+++++|+
T Consensus       248 ~~~~~i~~~~~~~~-----------~----~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~  312 (504)
T PLN00110        248 LLTRMIEEHTASAH-----------E----RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWS  312 (504)
T ss_pred             HHHHHHHHHHhhcc-----------c----cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHH
Confidence            88888877665310           0    12346899999976432 33469999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCCCEEEe
Q 008935          354 TVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRGTELLI  432 (548)
Q Consensus       354 l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG~~v~~  432 (548)
                      +++|++||++|+|+++|++++++.++.++++++++|||++|||+||||++|+++. ++|.+.+|++++||.||||+.|.+
T Consensus       313 l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~  392 (504)
T PLN00110        313 LAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSV  392 (504)
T ss_pred             HHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEE
Confidence            9999999999999999999999877778999999999999999999999999997 789999999999999999999999


Q ss_pred             cccccccCCCCccCCCCCCCCCCCCcccccccC---CCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCC
Q 008935          433 PILAVHHDQAIWGSEANDFNPARFSEGVARAAK---HPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSY  509 (548)
Q Consensus       433 ~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~---~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~  509 (548)
                      +.+++|+||++| +||++|+||||+++......   ...+++|||+|+|.|+|++||++|+++++++|+++|+|++.++.
T Consensus       393 ~~~~~h~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~  471 (504)
T PLN00110        393 NIWAIGRDPDVW-ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV  471 (504)
T ss_pred             eHHHhcCChhhc-CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC
Confidence            999999999999 99999999999965321111   23579999999999999999999999999999999999998765


Q ss_pred             ccCC--ceeEEeccCCCceeEEeeCC
Q 008935          510 QHAP--TVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       510 ~~~~--~~~~~~~p~~~~~v~~~~r~  533 (548)
                      +...  ....+..|..++++++++|.
T Consensus       472 ~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        472 ELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             ccCcccccccccccCCCceEeeccCC
Confidence            4332  23467778899999999995


No 10 
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.2e-73  Score=584.18  Aligned_cols=451  Identities=20%  Similarity=0.287  Sum_probs=348.3

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhC-CeEEEeeCCccEEEecCHHHHHHHHhc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYG-GTFLVWFGPTVRLAVSDPDLIREVFTS  127 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG-~i~~~~~~~~~~vvv~dpe~v~~i~~~  127 (548)
                      +.||||+++|++||++++..            ..    ....++.+|.++|| +||.+++|+.++|+|+||+.++++|.+
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~------------~~----~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~  120 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLK------------NR----PVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQ  120 (543)
T ss_pred             CCCcCCCCCCcccchHHhcc------------CC----cHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHh
Confidence            47899999999999987743            00    12347899999999 799999999999999999999999998


Q ss_pred             cCccccCCcchhhhhhhcCCc----eeecCCchHHhhhhhcCC-CCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCcee
Q 008935          128 KSELYEKNEANPLVKQLEGDG----LLSLKGEKWAHHRKIITP-TFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEV  202 (548)
Q Consensus       128 ~~~~f~~~~~~~~~~~~~g~~----l~~~~g~~w~~~Rk~l~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v  202 (548)
                      ++..|.+++.... ...++.+    ++..+|+.|+++|+++++ .+++..++.+.+.+.++++.+++.+.+.... +.++
T Consensus       121 ~~~~f~~rp~~~~-~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~v  198 (543)
T PLN02971        121 QDALFASRPLTYA-QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKN-SEPV  198 (543)
T ss_pred             cchhhcCCCcccc-hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCce
Confidence            8788888754322 2233433    677889999999999964 5666667778888999999898877654332 3469


Q ss_pred             eHHHHHHHHHHHHHhhhHcccccccc------h---hhHHHHHHHHHHHHHH---hHHhhccccccccccc-ccchHHHH
Q 008935          203 EVSEWFQLLTEDVITRTAFGSSYEDG------K---AIFRLQAQQMELAAET---FRKVFIPGYRFLPTKR-NISSWKLD  269 (548)
Q Consensus       203 dl~~~~~~~~~~ii~~~~fG~~~~~~------~---~~~~~~~~~~~~~~~~---~~~~~~p~~~~lp~~~-~~~~~~~~  269 (548)
                      |+.+.+.+++++++++++||.++...      +   +...............   ....++|++.+++... .+...+..
T Consensus       199 d~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~  278 (543)
T PLN02971        199 DLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESS  278 (543)
T ss_pred             ehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHH
Confidence            99999999999999999999876321      1   1112222222211111   1112344443333211 22334455


Q ss_pred             HHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCC-CCChHHHHHHHHHHHhchhHhHHH
Q 008935          270 KQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSS-NITDYDIIEECKSFFFAGKQTTSN  348 (548)
Q Consensus       270 ~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~-~l~~~ei~~~~~~~l~aG~dtta~  348 (548)
                      +.+.+++.++++++++....         .    ......|+++.+++...+++. .++++++.+++.++++||+|||++
T Consensus       279 ~~~~~~~~~~i~~~~~~~~~---------~----~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~  345 (543)
T PLN02971        279 AIMDKYHDPIIDERIKMWRE---------G----KRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSN  345 (543)
T ss_pred             HHHHHHHHHHHHHHHHHHhc---------c----CCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHH
Confidence            66788888888877653100         0    011246999999986543222 499999999999999999999999


Q ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCC
Q 008935          349 LLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRG  427 (548)
Q Consensus       349 ~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG  427 (548)
                      +++|++++|+.||++|+|+++||+++++.++.++++++++|||++|||+|+||++|++|. ++|.+.+|++++||.||||
T Consensus       346 tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkG  425 (543)
T PLN02971        346 AVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKG  425 (543)
T ss_pred             HHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCC
Confidence            999999999999999999999999999877889999999999999999999999999998 7899999999999999999


Q ss_pred             CEEEecccccccCCCCccCCCCCCCCCCCCccccc--ccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEe
Q 008935          428 TELLIPILAVHHDQAIWGSEANDFNPARFSEGVAR--AAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRL  505 (548)
Q Consensus       428 ~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~  505 (548)
                      +.|+++.|++||||++| +||++|+||||+++...  ....+.+|+|||+|+|.|+|++||+.|+++++++|+++|+|++
T Consensus       426 t~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~  504 (543)
T PLN02971        426 SQVLLSRYGLGRNPKVW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKL  504 (543)
T ss_pred             CEEEECcHHhcCChhhC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEe
Confidence            99999999999999999 99999999999975322  1124568999999999999999999999999999999999998


Q ss_pred             CCCC-cc--CCceeEEeccCCCceeEEeeC
Q 008935          506 APSY-QH--APTVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       506 ~~~~-~~--~~~~~~~~~p~~~~~v~~~~r  532 (548)
                      .++. ..  ..... +..-..++.+.+++|
T Consensus       505 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        505 AGSETRVELMESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             CCCCCCcchhhhcC-cccccccceeeeeec
Confidence            7643 22  11222 442334899999999


No 11 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.3e-73  Score=584.23  Aligned_cols=453  Identities=23%  Similarity=0.348  Sum_probs=348.7

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      +.||||+++|++|++..+..                  ....++.+|+++||++|++++|+.++|+++||+.+++++.++
T Consensus        36 ~~ppgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~   97 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMMDQ------------------LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQ   97 (516)
T ss_pred             CCCcCCCCCCeeccHHhcCC------------------cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhh
Confidence            47999999999999876522                  112368999999999999999999999999999999999987


Q ss_pred             CccccCCcchhhhhhhc---CCceeecCCchHHhhhhh-cCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeH
Q 008935          129 SELYEKNEANPLVKQLE---GDGLLSLKGEKWAHHRKI-ITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEV  204 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~~---g~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl  204 (548)
                      +..|++++.......+.   +.++++.+|+.|+++|++ ++++|+.++++.+.+. .++++.+++.|...   .+..+|+
T Consensus        98 ~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~---~~~~v~~  173 (516)
T PLN02183         98 DSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN---IGKPVNI  173 (516)
T ss_pred             hhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc---CCCcEeH
Confidence            77787765432222222   356778899999999998 5799999999988886 46789999988642   2457999


Q ss_pred             HHHHHHHHHHHHhhhHcccccccch-hhHHHHHHHHHHHHHHhHHhhcccccccc-cccccchHHHHHHHHHHHHHHHHH
Q 008935          205 SEWFQLLTEDVITRTAFGSSYEDGK-AIFRLQAQQMELAAETFRKVFIPGYRFLP-TKRNISSWKLDKQIKRSLTKLIEK  282 (548)
Q Consensus       205 ~~~~~~~~~~ii~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~lp-~~~~~~~~~~~~~l~~~l~~~i~~  282 (548)
                      .+++..++++++++++||.++++.. ++..................++|++.+++ .....+..+..+.+.+++.+++++
T Consensus       174 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  253 (516)
T PLN02183        174 GELIFTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDD  253 (516)
T ss_pred             HHHHHHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998775432 23232222222111111223455544432 222345556677788888888877


Q ss_pred             HHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCC-----------CCCCChHHHHHHHHHHHhchhHhHHHHHH
Q 008935          283 RKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNS-----------SSNITDYDIIEECKSFFFAGKQTTSNLLT  351 (548)
Q Consensus       283 r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-----------~~~l~~~ei~~~~~~~l~aG~dtta~~l~  351 (548)
                      +.+.....        ......+....|+++.++++..++           +..++++++.+++.++++||+|||+++++
T Consensus       254 ~~~~~~~~--------~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~  325 (516)
T PLN02183        254 HIQKRKNQ--------NADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIE  325 (516)
T ss_pred             HHHhhccc--------ccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHH
Confidence            65431100        000000112458999999754321           13589999999999999999999999999


Q ss_pred             HHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEE
Q 008935          352 WTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELL  431 (548)
Q Consensus       352 ~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~  431 (548)
                      |++|+|++||++|+|+++||+++++.++.++++++++||||+|||+||||++|++|+..|++.+|++++||.|||||.|.
T Consensus       326 ~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~  405 (516)
T PLN02183        326 WAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVM  405 (516)
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEE
Confidence            99999999999999999999999986667899999999999999999999999999988999999999999999999999


Q ss_pred             ecccccccCCCCccCCCCCCCCCCCCcccccc-cCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCc
Q 008935          432 IPILAVHHDQAIWGSEANDFNPARFSEGVARA-AKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQ  510 (548)
Q Consensus       432 ~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~  510 (548)
                      ++.+++||||++| +||++|+||||++++... ..+...|+|||+|+|.|+|++||++|+++++|+|+++|++++.++..
T Consensus       406 ~~~~~~hrd~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~  484 (516)
T PLN02183        406 INAWAIGRDKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMK  484 (516)
T ss_pred             EehhhhcCCcccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCC
Confidence            9999999999999 999999999999754321 12456899999999999999999999999999999999999877643


Q ss_pred             cC-C----ceeEEeccCCCceeEEeeC
Q 008935          511 HA-P----TVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       511 ~~-~----~~~~~~~p~~~~~v~~~~r  532 (548)
                      .. .    ..+.+..+...+.+.+++|
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        485 PSELDMNDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             CCCCChhhccccccccCCCcEEEeecC
Confidence            21 1    1122322334666776766


No 12 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=3.9e-73  Score=581.72  Aligned_cols=452  Identities=25%  Similarity=0.355  Sum_probs=349.3

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHh---CCeEEEeeCCccEEEecCHHHHHHHH
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIY---GGTFLVWFGPTVRLAVSDPDLIREVF  125 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y---G~i~~~~~~~~~~vvv~dpe~v~~i~  125 (548)
                      +++|||+++|++||+..+..            .+       ..+.+|.++|   |++|.+++|+++.++++||+.+++|+
T Consensus        30 ~~~pgp~~~p~~G~~~~~~~------------~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il   90 (516)
T PLN03195         30 RNRKGPKSWPIIGAALEQLK------------NY-------DRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVL   90 (516)
T ss_pred             cccCCCCCCCeecchHHHHh------------cc-------chHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHH
Confidence            46899999999999876543            11       1356777777   89999999999999999999999999


Q ss_pred             hccCccccCCcchh-hhhhhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHHHH-HHHHHHHHHHHHHhhcCCCceee
Q 008935          126 TSKSELYEKNEANP-LVKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVV-AKSVTDMLDKWVAMSKSGSVEVE  203 (548)
Q Consensus       126 ~~~~~~f~~~~~~~-~~~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i-~~~~~~l~~~l~~~~~~~~~~vd  203 (548)
                      .++...|.++..+. ....+.|.++++.+|+.|+++|+++++.|+.++++.+.+.+ .+.++.+++.+.+... ++..+|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd  169 (516)
T PLN03195         91 KTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASF-ANQVVD  169 (516)
T ss_pred             hhCccccCCcHhHHHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCeEc
Confidence            86655677664332 33345678888899999999999999999999999999976 6667777777765322 234799


Q ss_pred             HHHHHHHHHHHHHhhhHcccccccch------hhHHHHHHHHHHHHHHhHHhhcccc---cccccccccchHHHHHHHHH
Q 008935          204 VSEWFQLLTEDVITRTAFGSSYEDGK------AIFRLQAQQMELAAETFRKVFIPGY---RFLPTKRNISSWKLDKQIKR  274 (548)
Q Consensus       204 l~~~~~~~~~~ii~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~p~~---~~lp~~~~~~~~~~~~~l~~  274 (548)
                      +.+++..+++++++.++||.+++..+      .+..........   .....+.|.+   .+++....++..+..+.+.+
T Consensus       170 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  246 (516)
T PLN03195        170 MQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANII---VTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDD  246 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHH---HHHHHhcchhhHHHhcccchHHHHHHHHHHHHH
Confidence            99999999999999999999875321      222222211111   1111111221   11121112334456677888


Q ss_pred             HHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHH
Q 008935          275 SLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTT  354 (548)
Q Consensus       275 ~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l  354 (548)
                      ++.++++++.+....        ...  .......|+++.+++...+++..++++++.++++++++||+|||+++++|++
T Consensus       247 ~~~~~i~~~~~~~~~--------~~~--~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l  316 (516)
T PLN03195        247 FTYSVIRRRKAEMDE--------ARK--SGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFV  316 (516)
T ss_pred             HHHHHHHHHHHHHhc--------ccc--ccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHH
Confidence            888888777653110        000  0012356899999976544334699999999999999999999999999999


Q ss_pred             HHHhcCchHHHHHHHHHHHHhCC--------------------CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeec
Q 008935          355 VLLAMHPHWQVLAREEVLRVCGS--------------------RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAK  414 (548)
Q Consensus       355 ~~L~~~p~~~~~lr~Ei~~~~~~--------------------~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~  414 (548)
                      |+|++||++|+|+++||+++.+.                    ++.++++++++||||+|||+||||++|++|...|.+.
T Consensus       317 ~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~  396 (516)
T PLN03195        317 YMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGIL  396 (516)
T ss_pred             HHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhc
Confidence            99999999999999999998642                    2457899999999999999999999999999888888


Q ss_pred             CCccc-cCEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHH
Q 008935          415 ADVEL-GGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLA  493 (548)
Q Consensus       415 ~d~~l-~g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~  493 (548)
                      +|.++ +||.||||+.|.++.+++||||++||+||++|+||||++++......+..|+|||+|+|.|+|++||++|++++
T Consensus       397 ~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~  476 (516)
T PLN03195        397 EDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMA  476 (516)
T ss_pred             cCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHH
Confidence            87666 89999999999999999999999999999999999999643212234567999999999999999999999999


Q ss_pred             HHHHHHhceeEeCCCCccCCceeEEeccCCCceeEEeeCC
Q 008935          494 LAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       494 l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  533 (548)
                      ++.|+++|++++.++.+.......+..|+++++|++++|+
T Consensus       477 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        477 LALLCRFFKFQLVPGHPVKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             HHHHHHhceeEecCCCcceeeeeeEEecCCCEEEEEEeCC
Confidence            9999999999997765444444456789999999999884


No 13 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.2e-73  Score=584.58  Aligned_cols=450  Identities=23%  Similarity=0.354  Sum_probs=356.4

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      +.||||+++|++||+..+..                  ++..++.+|.++||++|++++|+.++++++||+.+++++.++
T Consensus        34 ~~pPgp~~~P~iG~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~   95 (517)
T PLN02687         34 PLPPGPRGWPVLGNLPQLGP------------------KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTH   95 (517)
T ss_pred             CCCccCCCCCccccHHhcCC------------------chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhc
Confidence            36889999999999876632                  244689999999999999999999999999999999999987


Q ss_pred             CccccCCcchhhhhhhc---CCceeecCCchHHhhhhhcC-CCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeH
Q 008935          129 SELYEKNEANPLVKQLE---GDGLLSLKGEKWAHHRKIIT-PTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEV  204 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~~---g~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl  204 (548)
                      ...|.+++.......+.   +.++++.+|+.|+++|++++ +.|+.++++.+.+.+.++++++++.|.+..  ++..+|+
T Consensus        96 ~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~--~~~~vd~  173 (517)
T PLN02687         96 DANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH--GTAPVNL  173 (517)
T ss_pred             chhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc--CCCceeH
Confidence            67888775433322222   23456668999999999998 899999999999999999999999997642  2357999


Q ss_pred             HHHHHHHHHHHHhhhHccccccc---ch---hhHHHHHHHHHHHHHHhHHhhcccccccccc-cccchHHHHHHHHHHHH
Q 008935          205 SEWFQLLTEDVITRTAFGSSYED---GK---AIFRLQAQQMELAAETFRKVFIPGYRFLPTK-RNISSWKLDKQIKRSLT  277 (548)
Q Consensus       205 ~~~~~~~~~~ii~~~~fG~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~-~~~~~~~~~~~l~~~l~  277 (548)
                      .+++..+++++++..+||.++..   .+   .+..................++|++.+++.. ...+..+..+.+.+++.
T Consensus       174 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~  253 (517)
T PLN02687        174 GQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMN  253 (517)
T ss_pred             HHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999988632   11   1222222222111100111234444333321 12345556777888888


Q ss_pred             HHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccC-----CCCCCChHHHHHHHHHHHhchhHhHHHHHHH
Q 008935          278 KLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSN-----SSSNITDYDIIEECKSFFFAGKQTTSNLLTW  352 (548)
Q Consensus       278 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-----~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~  352 (548)
                      ++++++++....              .+....|+++.+++...+     ++..++++++.+++..+++||+|||+++++|
T Consensus       254 ~~i~~r~~~~~~--------------~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~  319 (517)
T PLN02687        254 GIIEEHKAAGQT--------------GSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEW  319 (517)
T ss_pred             HHHHHHHHhccc--------------cCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHH
Confidence            888887764110              012346999999986432     2246999999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCCCEEE
Q 008935          353 TTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRGTELL  431 (548)
Q Consensus       353 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG~~v~  431 (548)
                      ++|+|++||++|+++++||+++++.++.++.+++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|.
T Consensus       320 ~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~  399 (517)
T PLN02687        320 AIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLL  399 (517)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEE
Confidence            99999999999999999999999877788999999999999999999999999997 78999999999999999999999


Q ss_pred             ecccccccCCCCccCCCCCCCCCCCCcccccc----cCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCC
Q 008935          432 IPILAVHHDQAIWGSEANDFNPARFSEGVARA----AKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAP  507 (548)
Q Consensus       432 ~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  507 (548)
                      ++.+++||||++| +||++|+||||+++....    ...+.+|+|||+|+|.|+|++||++|+++++++|+++|++++.+
T Consensus       400 ~~~~~~h~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~  478 (517)
T PLN02687        400 VNVWAIARDPEQW-PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELAD  478 (517)
T ss_pred             EecHHhcCCcccC-CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCC
Confidence            9999999999999 999999999999743211    12356799999999999999999999999999999999999986


Q ss_pred             CCccC-C----ceeEEeccCCCceeEEeeCC
Q 008935          508 SYQHA-P----TVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       508 ~~~~~-~----~~~~~~~p~~~~~v~~~~r~  533 (548)
                      +.... .    .....+.|..++.+++++|.
T Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        479 GQTPDKLNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             CCCcccCCcccccceeeecCCCeEEeeccCC
Confidence            64321 1    22345556667888888883


No 14 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.7e-73  Score=582.09  Aligned_cols=463  Identities=22%  Similarity=0.310  Sum_probs=347.2

Q ss_pred             HhHHhcchHHHHHHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCcc
Q 008935           32 AKGLWWTPRRIEDHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTV  111 (548)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~  111 (548)
                      ++++.+++..        .||||+++|++|++.++..              +   .....+.+|+++||+||++++|+.+
T Consensus        21 ~~~~~~~~~~--------~pPgp~~~p~~g~l~~~~~--------------~---~~~~~~~~~~~~yG~v~~i~~g~~~   75 (503)
T PLN02394         21 VSKLRGKKLK--------LPPGPAAVPIFGNWLQVGD--------------D---LNHRNLAEMAKKYGDVFLLRMGQRN   75 (503)
T ss_pred             HHHHhcCcCC--------CCcCCCCCCeeeeHHhcCC--------------C---chhHHHHHHHHHhCCeEEEEcCCee
Confidence            4555666654        7999999999999976532              0   1234789999999999999999999


Q ss_pred             EEEecCHHHHHHHHhccCccccCCcchhhhhhhcC---CceeecCCchHHhhhhhcC-CCCCHHHHhhhHHHHHHHHHHH
Q 008935          112 RLAVSDPDLIREVFTSKSELYEKNEANPLVKQLEG---DGLLSLKGEKWAHHRKIIT-PTFHMENLKLLVPVVAKSVTDM  187 (548)
Q Consensus       112 ~vvv~dpe~v~~i~~~~~~~f~~~~~~~~~~~~~g---~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~l  187 (548)
                      +|+++||+.+++++.+++..|.+++.......+.|   .+++..+|+.|+++|+.+. +.|++++++.+.+.++++++++
T Consensus        76 ~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~l  155 (503)
T PLN02394         76 LVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLV  155 (503)
T ss_pred             EEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHH
Confidence            99999999999999876667776543333333333   3467788999999999996 8999999999999999999999


Q ss_pred             HHHHHHhhcCCCceeeHHHHHHHHHHHHHhhhHcccccccchh-hHHHHHHHHHHHHHHhH------Hhhcccccccccc
Q 008935          188 LDKWVAMSKSGSVEVEVSEWFQLLTEDVITRTAFGSSYEDGKA-IFRLQAQQMELAAETFR------KVFIPGYRFLPTK  260 (548)
Q Consensus       188 ~~~l~~~~~~~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~p~~~~lp~~  260 (548)
                      ++.|.+....++..+|+.+++..++++++++++||.+++..++ .................      ..++|++......
T Consensus       156 v~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (503)
T PLN02394        156 VEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRG  235 (503)
T ss_pred             HHHHHHhhhccCCcEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhH
Confidence            9999765432234689999999999999999999998864322 11111111111111100      0112211110000


Q ss_pred             cccchHHHHHHHHH-HHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 008935          261 RNISSWKLDKQIKR-SLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFF  339 (548)
Q Consensus       261 ~~~~~~~~~~~l~~-~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l  339 (548)
                      ..+........... +...+++++++...         ..+  .......|+++.++++..+  ..++++++..++..++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~--~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~  302 (503)
T PLN02394        236 YLKICQDVKERRLALFKDYFVDERKKLMS---------AKG--MDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENIN  302 (503)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh---------hcc--CCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHH
Confidence            00111111111122 22334554443210         000  0012346899999987544  3589999999999999


Q ss_pred             hchhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCcccc-ceeecCCcc
Q 008935          340 FAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIAT-IRRAKADVE  418 (548)
Q Consensus       340 ~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~  418 (548)
                      +||+||||++++|++|+|++||++|++|++||+++++.++.++++++++||||+|||+|+||++|++|.. +|.+.+|++
T Consensus       303 ~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~  382 (503)
T PLN02394        303 VAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAK  382 (503)
T ss_pred             HhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcc
Confidence            9999999999999999999999999999999999998767789999999999999999999999999984 789999999


Q ss_pred             ccCEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCccccc--ccCCCccccccCCCCcCccchHHHHHHHHHHHHH
Q 008935          419 LGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVAR--AAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAI  496 (548)
Q Consensus       419 l~g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~  496 (548)
                      ++||.|||||.|.++.|++||||++| +||++|+||||+++++.  ......+|+|||.|+|+|+|++||++|+++++|+
T Consensus       383 i~g~~IP~Gt~V~~~~~~~~rd~~~~-~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~  461 (503)
T PLN02394        383 LGGYDIPAESKILVNAWWLANNPELW-KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGR  461 (503)
T ss_pred             cCCEEeCCCCEEEEchHHHhCCcccC-CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 99999999999975321  1223567999999999999999999999999999


Q ss_pred             HHHhceeEeCCCCc-cCCc--e-eEEeccCCCceeEEeeCC
Q 008935          497 ILQRFSFRLAPSYQ-HAPT--V-LMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       497 ll~~f~~~~~~~~~-~~~~--~-~~~~~p~~~~~v~~~~r~  533 (548)
                      |+++|++++.++.+ ....  . .+++..+.++.+++++|.
T Consensus       462 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        462 LVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             HHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence            99999999877652 3222  2 246644458999999984


No 15 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=6.1e-73  Score=582.07  Aligned_cols=475  Identities=25%  Similarity=0.419  Sum_probs=364.0

Q ss_pred             chHHHHHHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCC------------cch--hhhhhHHHHHHHHhCCeE
Q 008935           38 TPRRIEDHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSH------------NIL--PRVLSFYHHWKKIYGGTF  103 (548)
Q Consensus        38 ~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~yG~i~  103 (548)
                      .|...++++++.++|||+.-               +.+.+|+.|+            +.+  +.+...+.+|+++|||||
T Consensus       104 ~~~~~~~~~~~~~~pgp~la---------------a~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~  168 (633)
T PLN02738        104 FPATLRNGLAKLGPPGELLA---------------FLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIF  168 (633)
T ss_pred             chHHHHhhhhhCCCCCchHH---------------HHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEE
Confidence            46677889999999999831               1222333333            221  356678999999999999


Q ss_pred             EEeeCCccEEEecCHHHHHHHHhccCccccCCcchhhhhhhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHH
Q 008935          104 LVWFGPTVRLAVSDPDLIREVFTSKSELYEKNEANPLVKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKS  183 (548)
Q Consensus       104 ~~~~~~~~~vvv~dpe~v~~i~~~~~~~f~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~  183 (548)
                      ++++|+.++++|+||+.+++||.++...|.++..........+.++++.+|+.|+++|+.++++|+..+++.+.+.+.+.
T Consensus       169 ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l~~~i~~~  248 (633)
T PLN02738        169 RLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMISLFGQA  248 (633)
T ss_pred             EEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999776678776544444444567888899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCceeeHHHHHHHHHHHHHhhhHccccccc---chhhHHHHHHHHHHHHHHhHHh----hcccccc
Q 008935          184 VTDMLDKWVAMSKSGSVEVEVSEWFQLLTEDVITRTAFGSSYED---GKAIFRLQAQQMELAAETFRKV----FIPGYRF  256 (548)
Q Consensus       184 ~~~l~~~l~~~~~~~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~  256 (548)
                      ++.+++.|.+... .+..+|+.+.+..+++|+++.++||.+++.   .+.+...+..............    .+|.+..
T Consensus       249 v~~L~~~L~~~~~-~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  327 (633)
T PLN02738        249 SDRLCQKLDAAAS-DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKD  327 (633)
T ss_pred             HHHHHHHHHHHhc-CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhh
Confidence            9999999986543 345899999999999999999999998763   2233232222222111111111    1222222


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHH
Q 008935          257 LPTKRNISSWKLDKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECK  336 (548)
Q Consensus       257 lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~  336 (548)
                      ++.. .++..++.+.+.+.+..+++.+++.......     ............|+++.|++..    .+++++++.++++
T Consensus       328 l~~~-~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~-----~~~~~~~~~~~~dil~~Ll~~~----~~ls~~~L~~e~~  397 (633)
T PLN02738        328 ISPR-QRKVAEALKLINDTLDDLIAICKRMVEEEEL-----QFHEEYMNERDPSILHFLLASG----DDVSSKQLRDDLM  397 (633)
T ss_pred             hchH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----cchhcccccccchHHHHHHHcC----CCCCHHHHHHHHH
Confidence            2211 2333445555666666666544331100000     0000000123458999998753    3589999999999


Q ss_pred             HHHhchhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCC
Q 008935          337 SFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKAD  416 (548)
Q Consensus       337 ~~l~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d  416 (548)
                      .+++||+|||+++++|++|+|++||++|+|||+||+++++ +..++++++++||||+|||+|+|||||+++.++|++.+|
T Consensus       398 ~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d  476 (633)
T PLN02738        398 TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEN  476 (633)
T ss_pred             HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccC
Confidence            9999999999999999999999999999999999999998 467899999999999999999999999999988999999


Q ss_pred             ccccCEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCcccc--cccCCCccccccCCCCcCccchHHHHHHHHHHH
Q 008935          417 VELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVA--RAAKHPVGFIPFGLGVRTCVGQNLAILQTKLAL  494 (548)
Q Consensus       417 ~~l~g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l  494 (548)
                      .+++||.|||||.|+++.|.+||||++| +||++|+||||+.++.  ........|+|||.|+|.|+|++||++|+++++
T Consensus       477 ~~i~gy~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~L  555 (633)
T PLN02738        477 DMLGGYPIKRGEDIFISVWNLHRSPKHW-DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVAT  555 (633)
T ss_pred             ceECCEEECCCCEEEecHHHHhCCcccc-CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHH
Confidence            9999999999999999999999999999 9999999999985321  112245689999999999999999999999999


Q ss_pred             HHHHHhceeEeCCCCc-cCCceeEEeccCCCceeEEeeCCCCCCCCC
Q 008935          495 AIILQRFSFRLAPSYQ-HAPTVLMLLYPQYGAPIIFQHLPNNVDDPS  540 (548)
Q Consensus       495 ~~ll~~f~~~~~~~~~-~~~~~~~~~~p~~~~~v~~~~r~~~~~~~~  540 (548)
                      +.|+++|+|++.++.+ ......++..|+++++|++++|.....-|+
T Consensus       556 A~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~~~~~~~~  602 (633)
T PLN02738        556 AMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRTKPPVIPN  602 (633)
T ss_pred             HHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECCCCCCCCC
Confidence            9999999999986643 222335678899999999999976554443


No 16 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.4e-72  Score=577.04  Aligned_cols=467  Identities=21%  Similarity=0.334  Sum_probs=356.3

Q ss_pred             HHHHhCCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHH
Q 008935           44 DHFSKQGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIRE  123 (548)
Q Consensus        44 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~  123 (548)
                      .+.+++.||||+++|++||+..+..            ..   ..+.+++.+|+++||++|++++|+.+.|+++||+.+++
T Consensus        30 ~~~~~~lpPgp~~~pl~G~l~~~~~------------~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~   94 (519)
T PLN00168         30 GKKGRRLPPGPPAVPLLGSLVWLTN------------SS---ADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHA   94 (519)
T ss_pred             CCCCCCCCcCCCCCcccccHHhhcc------------cc---ccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHH
Confidence            3344567899999999999876532            00   13456889999999999999999999999999999999


Q ss_pred             HHhccCccccCCcchhhhhhhcC--Cceee--cCCchHHhhhh-hcCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCC
Q 008935          124 VFTSKSELYEKNEANPLVKQLEG--DGLLS--LKGEKWAHHRK-IITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSG  198 (548)
Q Consensus       124 i~~~~~~~f~~~~~~~~~~~~~g--~~l~~--~~g~~w~~~Rk-~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~  198 (548)
                      ++.++...|.+++...... +.+  .+++.  .+|+.|+++|| +++++|+.++++.+.+.+.++++.+++.|.+.... 
T Consensus        95 il~~~~~~f~~rp~~~~~~-~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~-  172 (519)
T PLN00168         95 ALVERGAALADRPAVASSR-LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAED-  172 (519)
T ss_pred             HHHhcCCccccCCcccchh-hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            9998777887765432222 223  23443  68999999886 78999999999999999999999999999765332 


Q ss_pred             CceeeHHHHHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHH----HHh-HHhhccccc-ccccccccchHHHHHHH
Q 008935          199 SVEVEVSEWFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAA----ETF-RKVFIPGYR-FLPTKRNISSWKLDKQI  272 (548)
Q Consensus       199 ~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~p~~~-~lp~~~~~~~~~~~~~l  272 (548)
                      +..+|+.+.+..++.++++.++||.++++..  ............    ... ...++|.+. .+......+..++.+.+
T Consensus       173 ~~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~  250 (519)
T PLN00168        173 AAAPRVVETFQYAMFCLLVLMCFGERLDEPA--VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQ  250 (519)
T ss_pred             CCCcCHHHHHHHHHHHHHHHHHcCCCcChhh--HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHH
Confidence            2368999999999999999999999876421  111111111110    000 112234321 11111123344567788


Q ss_pred             HHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhcc--CCCCCCChHHHHHHHHHHHhchhHhHHHHH
Q 008935          273 KRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASS--NSSSNITDYDIIEECKSFFFAGKQTTSNLL  350 (548)
Q Consensus       273 ~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~l~~~ei~~~~~~~l~aG~dtta~~l  350 (548)
                      .+++.++++++++.....    ...............|+++.|++...  +++..++++++.++++++++||+|||++++
T Consensus       251 ~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l  326 (519)
T PLN00168        251 KELFVPLIDARREYKNHL----GQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTAL  326 (519)
T ss_pred             HHHHHHHHHHHHHHhhhc----cccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHH
Confidence            888888888776531000    00000000000124589999987642  222469999999999999999999999999


Q ss_pred             HHHHHHHhcCchHHHHHHHHHHHHhCCC-CCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCCC
Q 008935          351 TWTTVLLAMHPHWQVLAREEVLRVCGSR-DLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRGT  428 (548)
Q Consensus       351 ~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG~  428 (548)
                      +|++++|++||++|+|+++||+++++.+ +.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+
T Consensus       327 ~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt  406 (519)
T PLN00168        327 QWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGA  406 (519)
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCC
Confidence            9999999999999999999999999754 568999999999999999999999999987 58999999999999999999


Q ss_pred             EEEecccccccCCCCccCCCCCCCCCCCCccccc-----ccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhcee
Q 008935          429 ELLIPILAVHHDQAIWGSEANDFNPARFSEGVAR-----AAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSF  503 (548)
Q Consensus       429 ~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~  503 (548)
                      .|.++.+++||||++| +||++|+||||+++...     ...++..|+|||+|+|.|+|++||++|+++++++|+++|+|
T Consensus       407 ~v~~~~~~~~~d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~  485 (519)
T PLN00168        407 TVNFMVAEMGRDEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEW  485 (519)
T ss_pred             EEEEChHHHhcCcccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccc
Confidence            9999999999999999 99999999999974211     11234679999999999999999999999999999999999


Q ss_pred             EeCCCCccCCc--eeEEeccCCCceeEEeeCCC
Q 008935          504 RLAPSYQHAPT--VLMLLYPQYGAPIIFQHLPN  534 (548)
Q Consensus       504 ~~~~~~~~~~~--~~~~~~p~~~~~v~~~~r~~  534 (548)
                      ++.++.+....  ..++..|.++++|+|++|+.
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        486 KEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             eeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            99766443322  34567788899999999963


No 17 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.2e-73  Score=534.66  Aligned_cols=451  Identities=21%  Similarity=0.307  Sum_probs=375.4

Q ss_pred             CCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEe-eCCccEEEecCHHHHHHHHhcc
Q 008935           50 GIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVW-FGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        50 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~-~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      .+|||+++|++|.+..+...              -..+.++.+..++++|||||+.. +|+...|.+.+|+.++.+|++.
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~--------------~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E  116 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAG--------------GATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE  116 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhh--------------hhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC
Confidence            58999999999998864321              01255678999999999999999 8889999999999999999977


Q ss_pred             CccccCCc-c---hhhhhhhcC--CceeecCCchHHhhhhhcCCC-CCHHHHhhhHHHHHHHHHHHHHHHHHhhc--CCC
Q 008935          129 SELYEKNE-A---NPLVKQLEG--DGLLSLKGEKWAHHRKIITPT-FHMENLKLLVPVVAKSVTDMLDKWVAMSK--SGS  199 (548)
Q Consensus       129 ~~~f~~~~-~---~~~~~~~~g--~~l~~~~g~~w~~~Rk~l~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~~--~~~  199 (548)
                       +.++-++ .   .....+.++  .|+++.+|++|.+.|..+++. +++++++.|.|.+++.+++++..+....+  ++.
T Consensus       117 -G~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~  195 (519)
T KOG0159|consen  117 -GKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGE  195 (519)
T ss_pred             -CCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccc
Confidence             4445552 2   223344444  689999999999999999976 68999999999999999999999988776  344


Q ss_pred             ceeeHHHHHHHHHHHHHhhhHcccccccc-----hhhHHHHHHHHHHHHHHhHHh-hcccccccccccccchHHHHHHHH
Q 008935          200 VEVEVSEWFQLLTEDVITRTAFGSSYEDG-----KAIFRLQAQQMELAAETFRKV-FIPGYRFLPTKRNISSWKLDKQIK  273 (548)
Q Consensus       200 ~~vdl~~~~~~~~~~ii~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~p~~~~lp~~~~~~~~~~~~~l~  273 (548)
                      ...|+.+.+.+++++.||.++||.+++..     ++....+......+....... ..+++++++++.+++..++.+.+.
T Consensus       196 ~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~  275 (519)
T KOG0159|consen  196 LVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIF  275 (519)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHH
Confidence            57899999999999999999999998642     222222222222222222222 245678999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHH
Q 008935          274 RSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWT  353 (548)
Q Consensus       274 ~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~  353 (548)
                      ++....|+++.+..+.+          . .......+.+..++..     .+++.+++..++++++.||.||||++++|+
T Consensus       276 ~~~~~~Id~~l~~l~~~----------~-~~~~~~~~~l~~~L~~-----~~l~~k~~~~~~~dll~aGvDTTs~tl~~~  339 (519)
T KOG0159|consen  276 DVGDKYIDNALEELEKQ----------D-SAGSEYTGSLLELLLR-----KELSRKDAKANVMDLLAAGVDTTSNTLLWA  339 (519)
T ss_pred             HHHHHHHHHHHHHHHhc----------c-ccccchhHHHHHHHHH-----ccCCHHHHHHHHHHHHHHhccchHHHHHHH
Confidence            99999998877652110          0 0011233444444443     368999999999999999999999999999


Q ss_pred             HHHHhcCchHHHHHHHHHHHHhCC-CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEe
Q 008935          354 TVLLAMHPHWQVLAREEVLRVCGS-RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLI  432 (548)
Q Consensus       354 l~~L~~~p~~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~  432 (548)
                      ||+|++||++|++|++|+.++... +..++.+++.+||||+||||||+||||.+|+..|...+|.+++||.|||||.|.+
T Consensus       340 Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l  419 (519)
T KOG0159|consen  340 LYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVL  419 (519)
T ss_pred             HHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEE
Confidence            999999999999999999999987 5678999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccC
Q 008935          433 PILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHA  512 (548)
Q Consensus       433 ~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~  512 (548)
                      +.+.+.+||++| ++|++|+|||||+++. ...++..++|||.|+|+|+|+++|++|+-+.|++++++|+++..++.+..
T Consensus       420 ~~~~~~r~~~~F-~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~  497 (519)
T KOG0159|consen  420 FLYVLGRNPAYF-PDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVE  497 (519)
T ss_pred             eehhhccChhhC-CCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCcc
Confidence            999999999999 9999999999999753 45579999999999999999999999999999999999999998877777


Q ss_pred             CceeEEeccCCCceeEEeeCC
Q 008935          513 PTVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       513 ~~~~~~~~p~~~~~v~~~~r~  533 (548)
                      ....+++.|..++.++|++|+
T Consensus       498 ~~~~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  498 YVYRFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             ceeEEEEcCCCCcceeeeeCC
Confidence            778899999999999999985


No 18 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=9.6e-73  Score=576.29  Aligned_cols=427  Identities=22%  Similarity=0.354  Sum_probs=334.2

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      +.||||+++|++||++++..                 .++..++.+|+++||++|++++|+.++|+++||+.+++++.++
T Consensus        29 ~~ppgp~~~p~~G~l~~l~~-----------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~   91 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQK-----------------LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQ   91 (502)
T ss_pred             CCCcCCCCCCeeccHHhcCC-----------------CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhC
Confidence            36999999999999987622                 1345689999999999999999999999999999999999877


Q ss_pred             CccccCCcchhhhhhh-cCC-ce-eecCCchHHhhhhh-cCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeH
Q 008935          129 SELYEKNEANPLVKQL-EGD-GL-LSLKGEKWAHHRKI-ITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEV  204 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~-~g~-~l-~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl  204 (548)
                      ...|.+++........ .+. ++ +..+|+.|+++|++ ++++|++.+++.+.+.+.+.++++++.|.+... ++..+|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~~~vdl  170 (502)
T PLN02966         92 DVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD-KSEVVDI  170 (502)
T ss_pred             cccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceeH
Confidence            6677765433221111 222 23 44578999999998 789999999999999999999999999976543 3447999


Q ss_pred             HHHHHHHHHHHHhhhHcccccccchh-hHHHHHHHHHHHHHH----hHHhhcccccccccc-c-ccchHHHHHHHHHHHH
Q 008935          205 SEWFQLLTEDVITRTAFGSSYEDGKA-IFRLQAQQMELAAET----FRKVFIPGYRFLPTK-R-NISSWKLDKQIKRSLT  277 (548)
Q Consensus       205 ~~~~~~~~~~ii~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~p~~~~lp~~-~-~~~~~~~~~~l~~~l~  277 (548)
                      .+++..+++++++.++||.+++..++ ...... ........    ....++|.+.+++.. . ........+.+.+++.
T Consensus       171 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (502)
T PLN02966        171 SELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIK-ILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQ  249 (502)
T ss_pred             HHHHHHHHHHHHHHHHhCCccCccchHHHHHHH-HHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998864322 222221 11111111    112234433222211 1 1122334455666777


Q ss_pred             HHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCC--CCCCChHHHHHHHHHHHhchhHhHHHHHHHHHH
Q 008935          278 KLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNS--SSNITDYDIIEECKSFFFAGKQTTSNLLTWTTV  355 (548)
Q Consensus       278 ~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~  355 (548)
                      +.++++.+...           .    .....|+++.+++..+++  +..++++++.++++++++||+|||+++++|++|
T Consensus       250 ~~i~~~~~~~~-----------~----~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~  314 (502)
T PLN02966        250 EVVNETLDPKR-----------V----KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMT  314 (502)
T ss_pred             HHHHHHHhccc-----------c----ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHH
Confidence            76666543210           0    123458999988765432  245899999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHHHHHHHhCCC--CCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCCCEEEe
Q 008935          356 LLAMHPHWQVLAREEVLRVCGSR--DLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRGTELLI  432 (548)
Q Consensus       356 ~L~~~p~~~~~lr~Ei~~~~~~~--~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG~~v~~  432 (548)
                      +|++||++|+|+++||+++++..  ..++++++++||||+|||+|+||++|++|. ++|.+.+|++++||.|||||.|.+
T Consensus       315 ~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~  394 (502)
T PLN02966        315 YLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNV  394 (502)
T ss_pred             HHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEE
Confidence            99999999999999999998742  357999999999999999999999999998 689999999999999999999999


Q ss_pred             cccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCC
Q 008935          433 PILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSY  509 (548)
Q Consensus       433 ~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~  509 (548)
                      +.+++||||++|||||++|+||||+++.......+..|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++.
T Consensus       395 ~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        395 NAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             ecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            99999999999999999999999997532212245689999999999999999999999999999999999998764


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.4e-72  Score=577.88  Aligned_cols=452  Identities=17%  Similarity=0.275  Sum_probs=353.0

Q ss_pred             CCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhccC
Q 008935           50 GIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSKS  129 (548)
Q Consensus        50 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~~  129 (548)
                      .||||+++|++||+.++..                  ++..++.+|+++||++|++++|+.++++++||+.+++++.++.
T Consensus        33 ~ppgp~~~pl~G~~~~~~~------------------~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~   94 (514)
T PLN03112         33 LPPGPPRWPIVGNLLQLGP------------------LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQD   94 (514)
T ss_pred             CccCCCCCCeeeeHHhcCC------------------chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCC
Confidence            6899999999999977632                  2345789999999999999999999999999999999998777


Q ss_pred             ccccCCcchhhh-hhhcC--CceeecCCchHHhhhhhc-CCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeHH
Q 008935          130 ELYEKNEANPLV-KQLEG--DGLLSLKGEKWAHHRKII-TPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEVS  205 (548)
Q Consensus       130 ~~f~~~~~~~~~-~~~~g--~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~  205 (548)
                      ..|++++..... ...+|  .+++..+|+.|+++|+++ ++.|+.++++.+.+.+.++++.+++.+.+... .+..+|+.
T Consensus        95 ~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~-~~~~vd~~  173 (514)
T PLN03112         95 DVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQ-TGKPVNLR  173 (514)
T ss_pred             cccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhc-cCCeeeHH
Confidence            788876543221 22233  345667899999999995 56899999999999999999999998765432 34579999


Q ss_pred             HHHHHHHHHHHhhhHcccccccch----hhHHHHHHHHHHHHHH----hHHhhccccccccc-ccccchHHHHHHHHHHH
Q 008935          206 EWFQLLTEDVITRTAFGSSYEDGK----AIFRLQAQQMELAAET----FRKVFIPGYRFLPT-KRNISSWKLDKQIKRSL  276 (548)
Q Consensus       206 ~~~~~~~~~ii~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~p~~~~lp~-~~~~~~~~~~~~l~~~l  276 (548)
                      +++..+++++++.++||.++...+    +...........+...    ....++|.+.+++. ...++..++.+.+.+++
T Consensus       174 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
T PLN03112        174 EVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFH  253 (514)
T ss_pred             HHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHH
Confidence            999999999999999998863211    1111111111111111    11223454444422 22244556677788888


Q ss_pred             HHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCC-CCCChHHHHHHHHHHHhchhHhHHHHHHHHHH
Q 008935          277 TKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSS-SNITDYDIIEECKSFFFAGKQTTSNLLTWTTV  355 (548)
Q Consensus       277 ~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~  355 (548)
                      ...++++++....            ........|+++.++++..+++ ..++++++.+++..+++||+||||++++|++|
T Consensus       254 ~~~i~~~~~~~~~------------~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~  321 (514)
T PLN03112        254 DKIIDEHRRARSG------------KLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMA  321 (514)
T ss_pred             HHHHHHHHHhhcc------------cccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence            8888876653110            0001234689999998654332 35899999999999999999999999999999


Q ss_pred             HHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccc-cceeecCCccccCEeeCCCCEEEecc
Q 008935          356 LLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIA-TIRRAKADVELGGYKIPRGTELLIPI  434 (548)
Q Consensus       356 ~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ipkG~~v~~~~  434 (548)
                      +|++||++|+++++||+++++.++.++++++++|||++|||+||+|++|+++. ++|.+.+|++++||.||||+.|.++.
T Consensus       322 ~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~  401 (514)
T PLN03112        322 EVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINT  401 (514)
T ss_pred             HHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEeh
Confidence            99999999999999999999877789999999999999999999999999997 68999999999999999999999999


Q ss_pred             cccccCCCCccCCCCCCCCCCCCccccc--c--cCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCc
Q 008935          435 LAVHHDQAIWGSEANDFNPARFSEGVAR--A--AKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQ  510 (548)
Q Consensus       435 ~~~~~d~~~~g~dp~~F~P~R~l~~~~~--~--~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~  510 (548)
                      +++||||++| +||++|+||||+.++..  .  ...+.+|+|||+|+|.|+|++||++|+++++++|+++|+|++.++..
T Consensus       402 ~~~h~d~~~~-~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~  480 (514)
T PLN03112        402 HGLGRNTKIW-DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLR  480 (514)
T ss_pred             HHhhCCcccC-CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCC
Confidence            9999999999 99999999998653211  1  12246799999999999999999999999999999999999875532


Q ss_pred             cC-C----ceeEEeccCCCceeEEeeCC
Q 008935          511 HA-P----TVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       511 ~~-~----~~~~~~~p~~~~~v~~~~r~  533 (548)
                      .. .    ...++..+.+++.+++++|.
T Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        481 PEDIDTQEVYGMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             cccCCCccccCcccccCCCeEEEeecCC
Confidence            11 1    12344445679999999995


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.8e-72  Score=566.95  Aligned_cols=426  Identities=19%  Similarity=0.284  Sum_probs=343.7

Q ss_pred             CCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhccC
Q 008935           50 GIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSKS  129 (548)
Q Consensus        50 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~~  129 (548)
                      .||||+++|++||+..+.+                  ++..++++|+++||++|++++|++++++++||+.+++++.++.
T Consensus        32 ~ppgp~~~P~~G~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~   93 (463)
T PLN02774         32 LPPGTMGWPLFGETTEFLK------------------QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEG   93 (463)
T ss_pred             CCCCCCCCCchhhHHHHHH------------------hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCC
Confidence            4689999999999988754                  2234789999999999999999999999999999999998766


Q ss_pred             ccccCCcchhhhhhhcC-CceeecCCchHHhhhhhcCCCCCHHHHhh-hHHHHHHHHHHHHHHHHHhhcCCCceeeHHHH
Q 008935          130 ELYEKNEANPLVKQLEG-DGLLSLKGEKWAHHRKIITPTFHMENLKL-LVPVVAKSVTDMLDKWVAMSKSGSVEVEVSEW  207 (548)
Q Consensus       130 ~~f~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~~~  207 (548)
                      ..|.++...... .++| .++++.+|+.|+++|+++++.|++..++. +.+.+.+.++++++.|..     +..+|+.+.
T Consensus        94 ~~~~~~~~~~~~-~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~  167 (463)
T PLN02774         94 KGLVPGYPQSML-DILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDG-----LKTIDIQEK  167 (463)
T ss_pred             CeEEecCCHHHH-HHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCC-----CCCEEeeHH
Confidence            666544322222 3444 46778899999999999999999999886 789999988888887752     236899999


Q ss_pred             HHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhcC
Q 008935          208 FQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRKANG  287 (548)
Q Consensus       208 ~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~~  287 (548)
                      +..+++++++.++||...+....  .......... .  ....+|  .++|....++..++.+.+.+++.+.++++++. 
T Consensus       168 ~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~-~--~~~~~~--~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~-  239 (463)
T PLN02774        168 TKEMALLSALKQIAGTLSKPISE--EFKTEFFKLV-L--GTLSLP--IDLPGTNYRSGVQARKNIVRMLRQLIQERRAS-  239 (463)
T ss_pred             HHHHHHHHHHHHHcCCCChHHHH--HHHHHHHHHh-c--ccccCC--cCCCChhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99999999999999976432111  1111111110 0  011122  23444334556677888888998888887653 


Q ss_pred             CchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHHH
Q 008935          288 NSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLA  367 (548)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~l  367 (548)
                                       ....+|+++.+++...+ +..++++++.+++.++++||+|||+++++|++++|++||++|+++
T Consensus       240 -----------------~~~~~d~l~~ll~~~~~-~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl  301 (463)
T PLN02774        240 -----------------GETHTDMLGYLMRKEGN-RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQEL  301 (463)
T ss_pred             -----------------CCCcccHHHHHHhCccC-CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHH
Confidence                             22346999999874322 235899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCC---CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEecccccccCCCCc
Q 008935          368 REEVLRVCGS---RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQAIW  444 (548)
Q Consensus       368 r~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d~~~~  444 (548)
                      ++|++++++.   ++.++++++++||||+|||+|+||++|+++.+.|.+++|++++||.||||+.|+++.+++||||++|
T Consensus       302 ~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~  381 (463)
T PLN02774        302 RKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLY  381 (463)
T ss_pred             HHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccC
Confidence            9999999863   3468999999999999999999999999998889999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEeccCCC
Q 008935          445 GSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYG  524 (548)
Q Consensus       445 g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~  524 (548)
                       +||++|+||||++++..   ....|+|||+|+|.|+|+++|++|++++++.|+++|+|++.++.+...  ..++.|++|
T Consensus       382 -~dP~~F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~--~~~~~p~~g  455 (463)
T PLN02774        382 -PDPMTFNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK--FPRVEAPNG  455 (463)
T ss_pred             -CChhccCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc--CCCCCCCCC
Confidence             99999999999975321   123599999999999999999999999999999999999987654332  234568899


Q ss_pred             ceeEEee
Q 008935          525 APIIFQH  531 (548)
Q Consensus       525 ~~v~~~~  531 (548)
                      ++|++++
T Consensus       456 ~~~~~~~  462 (463)
T PLN02774        456 LHIRVSP  462 (463)
T ss_pred             ceEEeee
Confidence            9999984


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.2e-72  Score=574.27  Aligned_cols=446  Identities=31%  Similarity=0.578  Sum_probs=367.2

Q ss_pred             CCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhccCc
Q 008935           51 IRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSKSE  130 (548)
Q Consensus        51 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~~~  130 (548)
                      ||||+++|++||+..+..                .+++.+++.+|+++|||||+++++++++++|+||+.+++++.++..
T Consensus         1 Ppgp~~~p~~G~~~~~~~----------------~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~   64 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR----------------KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSK   64 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT----------------THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTT
T ss_pred             CcCCCCcCceeEHHHhcC----------------CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccc
Confidence            799999999999999863                1256678999999999999999999999999999999999998766


Q ss_pred             cccCCcchhhh----hhhcCCceeecCCchHHhhhhhcCCCCCHH-HHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeHH
Q 008935          131 LYEKNEANPLV----KQLEGDGLLSLKGEKWAHHRKIITPTFHME-NLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEVS  205 (548)
Q Consensus       131 ~f~~~~~~~~~----~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~-~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~  205 (548)
                      .|..+.....+    ....+.++++.+|+.|+.+|+++.+.|+.. .+ .+.+.+.+.++++++.|.+....++ .+|+.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~-~vd~~  142 (463)
T PF00067_consen   65 YFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSG-PVDLF  142 (463)
T ss_dssp             TEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSES-EEEHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccc-eeeee
Confidence            67665322222    245678899999999999999999999998 66 8999999999999999998764333 79999


Q ss_pred             HHHHHHHHHHHhhhHccccccc-ch----hhHHHHHHHHHHHHHHh--HHhhcccccccccccccchHHHHHHHHHHHHH
Q 008935          206 EWFQLLTEDVITRTAFGSSYED-GK----AIFRLQAQQMELAAETF--RKVFIPGYRFLPTKRNISSWKLDKQIKRSLTK  278 (548)
Q Consensus       206 ~~~~~~~~~ii~~~~fG~~~~~-~~----~~~~~~~~~~~~~~~~~--~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~  278 (548)
                      ++++.++++++++++||.+++. .+    ............+....  ....+|++.+++....+...++.+.+.+++.+
T Consensus       143 ~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (463)
T PF00067_consen  143 DWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKE  222 (463)
T ss_dssp             HHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999998762 12    22333333332221111  22345656667766667777788899999999


Q ss_pred             HHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhc-cCCC-CCCChHHHHHHHHHHHhchhHhHHHHHHHHHHH
Q 008935          279 LIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQAS-SNSS-SNITDYDIIEECKSFFFAGKQTTSNLLTWTTVL  356 (548)
Q Consensus       279 ~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~-~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~  356 (548)
                      +++++++....              ......|+++.++... ..++ ..++++++.++++.+++||+|||+++++|++++
T Consensus       223 ~i~~~~~~~~~--------------~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~  288 (463)
T PF00067_consen  223 IIEERREELDD--------------GDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYE  288 (463)
T ss_dssp             HHHHHHHSHHS--------------SSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccc--------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99988875210              0135679999999986 3333 379999999999999999999999999999999


Q ss_pred             HhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCcc-ccceeecCCccccCEeeCCCCEEEeccc
Q 008935          357 LAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPII-ATIRRAKADVELGGYKIPRGTELLIPIL  435 (548)
Q Consensus       357 L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ipkG~~v~~~~~  435 (548)
                      |++||++|+++++||+++.+.++.++.+++++||||+|||+||+|++|+++ .++|.+.+|++++||.||||+.|+++.+
T Consensus       289 L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~  368 (463)
T PF00067_consen  289 LAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIY  368 (463)
T ss_dssp             HHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999976678899999999999999999999999999 6889999999999999999999999999


Q ss_pred             ccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCce
Q 008935          436 AVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTV  515 (548)
Q Consensus       436 ~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  515 (548)
                      ++|+||++| +||++|+||||++++......+..|+|||.|+|.|+|++||++|+++++++||++|+|++.++....+..
T Consensus       369 ~~~~d~~~~-~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~  447 (463)
T PF00067_consen  369 ALHRDPEYF-PDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQE  447 (463)
T ss_dssp             HHTTSTTTS-SSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEE
T ss_pred             ccccccccc-ccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCcc
Confidence            999999999 9999999999998754223467889999999999999999999999999999999999998765543333


Q ss_pred             e--EEeccCCCceeEE
Q 008935          516 L--MLLYPQYGAPIIF  529 (548)
Q Consensus       516 ~--~~~~p~~~~~v~~  529 (548)
                      .  .+..|..++.|+|
T Consensus       448 ~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  448 QQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             CSCSSSEEESSSEEEE
T ss_pred             ccCceEeeCCCcEEeC
Confidence            2  2445556788776


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.7e-71  Score=558.26  Aligned_cols=424  Identities=24%  Similarity=0.377  Sum_probs=346.4

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      ..||||+++|++||+.++...                 ++..++.+++++||++|++++++.++|+++||+.+++++.++
T Consensus        35 ~~Ppgp~~~P~iG~~~~~~~~-----------------~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~   97 (463)
T PLN02196         35 PLPPGTMGWPYVGETFQLYSQ-----------------DPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTK   97 (463)
T ss_pred             CCCCCCCCCCccchHHHHHhc-----------------CHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCC
Confidence            467788889999999876431                 344578999999999999999999999999999999999877


Q ss_pred             CccccCCcchhhhhhhcC-CceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeHHHH
Q 008935          129 SELYEKNEANPLVKQLEG-DGLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEVSEW  207 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~~~  207 (548)
                      .+.|.. ..........| .++++.+|+.|+++|+++++.|++++++.+.+.+.+.++++++.|.      +..+|+.++
T Consensus        98 ~~~~~~-~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~------~~~v~~~~~  170 (463)
T PLN02196         98 SHLFKP-TFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE------GTQINTYQE  170 (463)
T ss_pred             CCcccc-cCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC------CCeEEeHHH
Confidence            666632 22222333455 4788899999999999999999999999999999999999998774      236899999


Q ss_pred             HHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhcC
Q 008935          208 FQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRKANG  287 (548)
Q Consensus       208 ~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~~  287 (548)
                      +..+++++++.++||.+.....+   ............+  ..+|+  .+|....++..++.+.+.+++.+.++++.+. 
T Consensus       171 ~~~~~~~v~~~~~fG~~~~~~~~---~~~~~~~~~~~~~--~~~~~--~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~-  242 (463)
T PLN02196        171 MKTYTFNVALLSIFGKDEVLYRE---DLKRCYYILEKGY--NSMPI--NLPGTLFHKSMKARKELAQILAKILSKRRQN-  242 (463)
T ss_pred             HHHHHHHHHHHHHcCCCCchHHH---HHHHHHHHHhcch--hcccc--cCCCccchHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            99999999999999987532111   1111111111111  01222  2343334566677888888998888877653 


Q ss_pred             CchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHHH
Q 008935          288 NSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLA  367 (548)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~l  367 (548)
                                       .....|+++.+++..    .+++++++.++++.+++||+|||+++++|++++|++||++|+++
T Consensus       243 -----------------~~~~~d~l~~ll~~~----~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl  301 (463)
T PLN02196        243 -----------------GSSHNDLLGSFMGDK----EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAV  301 (463)
T ss_pred             -----------------CCCcccHHHHHHhcC----CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHH
Confidence                             223468999888632    46899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCC---CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEecccccccCCCCc
Q 008935          368 REEVLRVCGS---RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQAIW  444 (548)
Q Consensus       368 r~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d~~~~  444 (548)
                      ++|++++.+.   ++.+++++++++|||+|||+|+||++|++++..|.+.+|++++||.||||+.|+++.+++||||++|
T Consensus       302 ~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~  381 (463)
T PLN02196        302 TEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIF  381 (463)
T ss_pred             HHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhc
Confidence            9999998864   3568999999999999999999999999999889999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEeccCCC
Q 008935          445 GSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYG  524 (548)
Q Consensus       445 g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~  524 (548)
                       +||++|+||||+++.     .+.+++|||+|+|.|+|+++|++|++++++.|+++|+|++.++... .....+..|+++
T Consensus       382 -~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~p~~~  454 (463)
T PLN02196        382 -SDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNG-IQYGPFALPQNG  454 (463)
T ss_pred             -CCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCc-eEEcccccCCCC
Confidence             999999999999631     3568999999999999999999999999999999999999866432 334456689999


Q ss_pred             ceeEEeeC
Q 008935          525 APIIFQHL  532 (548)
Q Consensus       525 ~~v~~~~r  532 (548)
                      ++|+++..
T Consensus       455 ~~~~~~~~  462 (463)
T PLN02196        455 LPIALSRK  462 (463)
T ss_pred             ceEEEecC
Confidence            99999764


No 23 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=9.6e-71  Score=556.26  Aligned_cols=444  Identities=20%  Similarity=0.285  Sum_probs=347.5

Q ss_pred             CCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhccCc
Q 008935           51 IRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSKSE  130 (548)
Q Consensus        51 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~~~  130 (548)
                      ||||+++|++||++++..                 .++..++.+|+++||++|++++|+.++|+|+||+.+++++.++..
T Consensus         1 ppgp~~lP~iG~l~~~~~-----------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~   63 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE-----------------KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFS   63 (466)
T ss_pred             CcCCCCCCccccHHHcCC-----------------CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCc
Confidence            689999999999987732                 024468999999999999999999999999999999999998778


Q ss_pred             cccCCcchhhhhhhcCC--ceeec-CCchHHhhhhhcC-CCCCHHHHhhhHHHHHHHHHHHHHHHHHhhc-CCCceeeHH
Q 008935          131 LYEKNEANPLVKQLEGD--GLLSL-KGEKWAHHRKIIT-PTFHMENLKLLVPVVAKSVTDMLDKWVAMSK-SGSVEVEVS  205 (548)
Q Consensus       131 ~f~~~~~~~~~~~~~g~--~l~~~-~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~-~~~~~vdl~  205 (548)
                      .|.+++.......+.++  .+++. +|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.+... ..+..+|+.
T Consensus        64 ~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~  143 (466)
T PLN02655         64 SISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFR  143 (466)
T ss_pred             hhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHH
Confidence            88877544444434443  34454 4899999997664 5678778888999999999999988876543 234579999


Q ss_pred             HHHHHHHHHHHhhhHcccccccch--hhH------HHHHHHHHHHHHH----hHHhhccccccccccccc-chHHHHHHH
Q 008935          206 EWFQLLTEDVITRTAFGSSYEDGK--AIF------RLQAQQMELAAET----FRKVFIPGYRFLPTKRNI-SSWKLDKQI  272 (548)
Q Consensus       206 ~~~~~~~~~ii~~~~fG~~~~~~~--~~~------~~~~~~~~~~~~~----~~~~~~p~~~~lp~~~~~-~~~~~~~~l  272 (548)
                      +++.++++++++.++||.+++...  ++.      .............    ....++|.++++|..... ...+....+
T Consensus       144 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~  223 (466)
T PLN02655        144 DVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRR  223 (466)
T ss_pred             HHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHH
Confidence            999999999999999998765321  111      1111111111111    111245555555532111 122223344


Q ss_pred             HHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHH
Q 008935          273 KRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTW  352 (548)
Q Consensus       273 ~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~  352 (548)
                      .+++..+++++++...           .    .....|+++.+++..    ..++++++.+++.++++||+|||+++++|
T Consensus       224 ~~~~~~~i~~~~~~~~-----------~----~~~~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~  284 (466)
T PLN02655        224 TAVMKALIKQQKKRIA-----------R----GEERDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEW  284 (466)
T ss_pred             HHHHHHHHHHHHHhhc-----------C----CCCcccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677777776654310           0    122458999999764    35899999999999999999999999999


Q ss_pred             HHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCcccc-ceeecCCccccCEeeCCCCEEE
Q 008935          353 TTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIAT-IRRAKADVELGGYKIPRGTELL  431 (548)
Q Consensus       353 ~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ipkG~~v~  431 (548)
                      ++++|++||++|+++++||+++++.+. +++++++++|||+|||+||||++|+++.. +|.+.+|++++||.||||+.|+
T Consensus       285 ~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~  363 (466)
T PLN02655        285 AMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIA  363 (466)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEE
Confidence            999999999999999999999998644 99999999999999999999999999985 7999999999999999999999


Q ss_pred             ecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCc-
Q 008935          432 IPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQ-  510 (548)
Q Consensus       432 ~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~-  510 (548)
                      ++.+++||||++| +||++|+||||+++... ......++|||+|+|.|+|++||+.|+++++++|+.+|++++.++.. 
T Consensus       364 ~~~~~~~~d~~~~-~~p~~F~PeR~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~  441 (466)
T PLN02655        364 INIYGCNMDKKRW-ENPEEWDPERFLGEKYE-SADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEE  441 (466)
T ss_pred             ecHHHhcCCcccC-CChhccCccccCCCCcc-cCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc
Confidence            9999999999999 99999999999975321 12346899999999999999999999999999999999999976643 


Q ss_pred             cCCceeEEeccCCCceeEEeeCC
Q 008935          511 HAPTVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       511 ~~~~~~~~~~p~~~~~v~~~~r~  533 (548)
                      ......++..|++++.+++++|.
T Consensus       442 ~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        442 KEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             ccchhheeEeecCCcEEEEeecC
Confidence            23334567778899999999885


No 24 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=9.7e-70  Score=555.65  Aligned_cols=439  Identities=23%  Similarity=0.354  Sum_probs=348.0

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCC--eEEEeeCCccEEEecCHHHHHHHHh
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGG--TFLVWFGPTVRLAVSDPDLIREVFT  126 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--i~~~~~~~~~~vvv~dpe~v~~i~~  126 (548)
                      +.||||+++|++|++.++....           .  ..++..++.+++++||+  +|++++++.+.++++||+.+++++.
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~~-----------~--~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~  108 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRAF-----------K--SSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLT  108 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHhc-----------c--cCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHc
Confidence            4689999999999998876521           0  01345688999999997  7899999999999999999999998


Q ss_pred             ccCccccCCcchhhhhhhcC-CceeecCCchHHhhhhhcCCCCC-HHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeH
Q 008935          127 SKSELYEKNEANPLVKQLEG-DGLLSLKGEKWAHHRKIITPTFH-MENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEV  204 (548)
Q Consensus       127 ~~~~~f~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rk~l~~~f~-~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl  204 (548)
                      ++ +.|.++....... .+| .++...+|+.|+++|+.+++.|+ +++++.+.+.+.+.++++++.|..    + ..+|+
T Consensus       109 ~~-~~f~~~~~~~~~~-~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~-~~v~~  181 (490)
T PLN02302        109 DD-DAFEPGWPESTVE-LIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK----M-GEIEF  181 (490)
T ss_pred             CC-CccccCCchhHHH-HhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC----C-CCEeh
Confidence            65 6676553222222 344 34566799999999999999994 788999999999999999998853    2 36899


Q ss_pred             HHHHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 008935          205 SEWFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRK  284 (548)
Q Consensus       205 ~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~  284 (548)
                      .++++.++++++++++||.+.+....  . ...........+.  .++  ..+|.....+..++.+.+.+++.+.++++.
T Consensus       182 ~~~~~~~~~~vi~~~~~G~~~~~~~~--~-~~~~~~~~~~~~~--~~~--~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        182 LTELRKLTFKIIMYIFLSSESELVME--A-LEREYTTLNYGVR--AMA--INLPGFAYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHHHHHHHHHHHcCCCChHHHH--H-HHHHHHHHHHHhh--hCC--cCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987643211  1 1111111111110  111  122333334455667788888888888876


Q ss_pred             hcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHH
Q 008935          285 ANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQ  364 (548)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~  364 (548)
                      +....         .    ......|+++.+++...+++..++++++.++++.+++||+|||+++++|++++|++||++|
T Consensus       255 ~~~~~---------~----~~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~  321 (490)
T PLN02302        255 NSRKQ---------N----ISPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVL  321 (490)
T ss_pred             Hhhhc---------c----CCCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHH
Confidence            53110         0    0123569999999875544456899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCC----CCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEecccccccC
Q 008935          365 VLAREEVLRVCGSR----DLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHD  440 (548)
Q Consensus       365 ~~lr~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d  440 (548)
                      +|+++|++++++..    ..++++++++||||+|||+|++|++|+++...|.+.+|++++||.||||+.|.++.+++|||
T Consensus       322 ~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd  401 (490)
T PLN02302        322 QKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMD  401 (490)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCC
Confidence            99999999998642    13789999999999999999999999999888999999999999999999999999999999


Q ss_pred             CCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEec
Q 008935          441 QAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLLY  520 (548)
Q Consensus       441 ~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  520 (548)
                      |++| +||++|+||||+++.    ..+..++|||+|+|.|+|+++|.+|+++++++|+++|+|++.++.. .........
T Consensus       402 ~~~~-~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~  475 (490)
T PLN02302        402 PEVY-PNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVMYLPHPR  475 (490)
T ss_pred             cccC-CCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cceeCCCCC
Confidence            9999 999999999999642    2456799999999999999999999999999999999999875422 222223478


Q ss_pred             cCCCceeEEeeCC
Q 008935          521 PQYGAPIIFQHLP  533 (548)
Q Consensus       521 p~~~~~v~~~~r~  533 (548)
                      |.+++++++++|.
T Consensus       476 p~~~~~~~~~~~~  488 (490)
T PLN02302        476 PKDNCLARITKVA  488 (490)
T ss_pred             CCCCceEEEEecc
Confidence            9999999999985


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=4e-70  Score=550.09  Aligned_cols=438  Identities=21%  Similarity=0.305  Sum_probs=344.9

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      ..||||+++|++||++.+...             .+...+..++.+|.++||+||++++|+++.|+++||++++++|.++
T Consensus         7 ~~Ppg~~~~P~iG~~~~l~~~-------------~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~   73 (452)
T PLN03141          7 RLPKGSLGWPVIGETLDFISC-------------AYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSD   73 (452)
T ss_pred             CCCCCCCCCCchhhHHHHHhh-------------cccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCC
Confidence            467899999999999887541             0011355689999999999999999999999999999999999987


Q ss_pred             CccccCCcchhhhhhhcC-CceeecCCchHHhhhhhcCCCCCHHHHhh-hHHHHHHHHHHHHHHHHHhhcCCCceeeHHH
Q 008935          129 SELYEKNEANPLVKQLEG-DGLLSLKGEKWAHHRKIITPTFHMENLKL-LVPVVAKSVTDMLDKWVAMSKSGSVEVEVSE  206 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~~  206 (548)
                      ++.|..+.. ..+..++| .++++.+|+.|+++|+++++.|+..++.. +.+.+.+.++++++.|.     .+..+|+.+
T Consensus        74 ~~~~~~~~~-~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  147 (452)
T PLN03141         74 GNAFVPAYP-KSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWR-----DDPPVLVQD  147 (452)
T ss_pred             CCeeeccCc-hhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhcc-----CCCCEEhHH
Confidence            777765422 23344555 46888899999999999999998877765 35666666666666553     234789999


Q ss_pred             HHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhc
Q 008935          207 WFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRKAN  286 (548)
Q Consensus       207 ~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~  286 (548)
                      .+..++++++++++||.+.++.  ...... ....+....  ..+|.  ++|.....+..++.+++.+++..+++++++.
T Consensus       148 ~~~~~~~~vi~~~~~G~~~~~~--~~~~~~-~~~~~~~~~--~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        148 ETKKIAFEVLVKALISLEPGEE--MEFLKK-EFQEFIKGL--MSLPI--KLPGTRLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHHHHHHHHHHcCCCchHH--HHHHHH-HHHHHhhhH--HhCcc--CCCchHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999865321  111111 111111111  11232  2343333445567888999999999887654


Q ss_pred             CCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHH
Q 008935          287 GNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVL  366 (548)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~  366 (548)
                      ...        ..+  .......|+++.+++...   ..++++++.++++.+++||+|||+++++|++++|++||++|++
T Consensus       221 ~~~--------~~~--~~~~~~~d~l~~ll~~~~---~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~k  287 (452)
T PLN03141        221 MKN--------KEE--DETGIPKDVVDVLLRDGS---DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQ  287 (452)
T ss_pred             Hhc--------cCc--cccCChhhHHHHHHhcCC---CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHH
Confidence            110        000  000124689999987642   3689999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhC----CCCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEecccccccCCC
Q 008935          367 AREEVLRVCG----SRDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQA  442 (548)
Q Consensus       367 lr~Ei~~~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d~~  442 (548)
                      +++|++++.+    .++.++.+++.+||||+|||+|++|++|+++.++|.+.+|++++||.||||+.|+++.+++|+||+
T Consensus       288 l~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~  367 (452)
T PLN03141        288 LTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEE  367 (452)
T ss_pred             HHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCch
Confidence            9999998863    234579999999999999999999999999888999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEeccC
Q 008935          443 IWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQ  522 (548)
Q Consensus       443 ~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~  522 (548)
                      +| +||++|+||||++++    ..+.+|+|||+|+|.|+|++||++|+++++|+|+++|+|++.++...   ...++.|+
T Consensus       368 ~~-~dP~~F~PeRfl~~~----~~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~~~~~~~~  439 (452)
T PLN03141        368 NY-DNPYQFNPWRWQEKD----MNNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---NFPTVRMK  439 (452)
T ss_pred             hc-CCccccCcccccCCC----CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---ecccccCC
Confidence            99 999999999999752    13568999999999999999999999999999999999998765322   23477999


Q ss_pred             CCceeEEeeCC
Q 008935          523 YGAPIIFQHLP  533 (548)
Q Consensus       523 ~~~~v~~~~r~  533 (548)
                      ++++|++++|+
T Consensus       440 ~~~~~~~~~~~  450 (452)
T PLN03141        440 RKLPIWVTRID  450 (452)
T ss_pred             CCceEEEEeCC
Confidence            99999999994


No 26 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.3e-68  Score=541.87  Aligned_cols=418  Identities=21%  Similarity=0.327  Sum_probs=332.1

Q ss_pred             hHHHHHHHHhC-CeEEEeeCCccEEEecCHHHHHHHHhccCccccCCcch-hhhhhhcCCceeecCCchHHhhhhhcCCC
Q 008935           90 SFYHHWKKIYG-GTFLVWFGPTVRLAVSDPDLIREVFTSKSELYEKNEAN-PLVKQLEGDGLLSLKGEKWAHHRKIITPT  167 (548)
Q Consensus        90 ~~~~~~~~~yG-~i~~~~~~~~~~vvv~dpe~v~~i~~~~~~~f~~~~~~-~~~~~~~g~~l~~~~g~~w~~~Rk~l~~~  167 (548)
                      +.+..+.++++ .+++++..+.  ++++||+.+++++..+...|.++..+ ..+..+.|+|+++.+|+.|+++||.+++.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~g~~wk~~Rk~l~~~  141 (502)
T PLN02426         64 DWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMASLE  141 (502)
T ss_pred             HHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecCcHHHHHHHHHhHhh
Confidence            35556777777 4777776554  89999999999998776778876433 34556678999999999999999999999


Q ss_pred             CCHHHHhhhH--HHHHHHHHHHHHHHHHhhcC-CCceeeHHHHHHHHHHHHHhhhHcccccccch------hhHHHHHHH
Q 008935          168 FHMENLKLLV--PVVAKSVTDMLDKWVAMSKS-GSVEVEVSEWFQLLTEDVITRTAFGSSYEDGK------AIFRLQAQQ  238 (548)
Q Consensus       168 f~~~~l~~~~--~~i~~~~~~l~~~l~~~~~~-~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~------~~~~~~~~~  238 (548)
                      |+.++++.+.  +.+.+.++.+++.+.+..+. .+..+|+.+++.++++|+++.++||.+++..+      ++.......
T Consensus       142 fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~~~  221 (502)
T PLN02426        142 LGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFDTA  221 (502)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHHHH
Confidence            9999988764  67778788888888765422 23579999999999999999999999875321      222222221


Q ss_pred             HHHHHHHhHHhhcccc----cccccccccchHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHH
Q 008935          239 MELAAETFRKVFIPGY----RFLPTKRNISSWKLDKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGL  314 (548)
Q Consensus       239 ~~~~~~~~~~~~~p~~----~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~  314 (548)
                      ........ ...+|++    .+++.+..++..++.+.+.+++.++|+++++..                 .....|+++.
T Consensus       222 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-----------------~~~~~dll~~  283 (502)
T PLN02426        222 SKLSAERA-MAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG-----------------FSASKDLLSR  283 (502)
T ss_pred             HHHHHHHH-hcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc-----------------cCCcchHHHH
Confidence            11111000 0011211    223333345667778889999999998877631                 1234689999


Q ss_pred             HHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCC-CCCCHHhhccChhHH
Q 008935          315 MIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSR-DLPTRDDVAKLKTLS  393 (548)
Q Consensus       315 ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~-~~~~~~~l~~lp~l~  393 (548)
                      +++..      .+++++.++++++++||+|||+++++|++|+|++||++|+|+++||+++.+.+ ..++++++++||||+
T Consensus       284 ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~  357 (502)
T PLN02426        284 FMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLH  357 (502)
T ss_pred             HHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHH
Confidence            99763      36789999999999999999999999999999999999999999999998754 368999999999999


Q ss_pred             HHHHHHhcCCCCccccceeecCCccc-cCEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccc
Q 008935          394 MILNESLRLYPPIIATIRRAKADVEL-GGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIP  472 (548)
Q Consensus       394 a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~  472 (548)
                      |||+|+||++||+|...|.+.+|.++ +|+.|||||.|.++.+++||||++||+||++|+||||++++......+..++|
T Consensus       358 avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~p  437 (502)
T PLN02426        358 AALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPV  437 (502)
T ss_pred             HHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCC
Confidence            99999999999999988999998887 89999999999999999999999999999999999999743211224567999


Q ss_pred             cCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCc--cCCceeEEeccCCCceeEEeeCC
Q 008935          473 FGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQ--HAPTVLMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       473 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~v~~~~r~  533 (548)
                      ||+|+|.|+|+++|++|++++++.|+++|++++.++..  .......+++|++|++|++++|.
T Consensus       438 Fg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        438 FQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            99999999999999999999999999999999864322  23334578899999999999984


No 27 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=5.3e-69  Score=547.43  Aligned_cols=453  Identities=19%  Similarity=0.283  Sum_probs=338.5

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHh-CCeEEEeeCCccEEEecCHHHHHHHHhc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIY-GGTFLVWFGPTVRLAVSDPDLIREVFTS  127 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-G~i~~~~~~~~~~vvv~dpe~v~~i~~~  127 (548)
                      +.||||+++|++||++++...            ..    ...+++++.++| |+||++++|++++|+|+||+.+++++.+
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~------------~~----~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~  103 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMT------------RP----RSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRE  103 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccC------------CC----cchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHh
Confidence            358999999999999887420            00    002355556665 7999999999999999999999999998


Q ss_pred             cCccccCCcchhhhhhhcC--Cceeec-CCchHHhhhhhcCCCCCHHH-HhhhHHHHHHHHHHHHHHHHHhhcCCCceee
Q 008935          128 KSELYEKNEANPLVKQLEG--DGLLSL-KGEKWAHHRKIITPTFHMEN-LKLLVPVVAKSVTDMLDKWVAMSKSGSVEVE  203 (548)
Q Consensus       128 ~~~~f~~~~~~~~~~~~~g--~~l~~~-~g~~w~~~Rk~l~~~f~~~~-l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd  203 (548)
                      +...|++++.......+..  .++++. +|+.|+++|+++++.|.... ...+.+.++.+++++++.+.+.... +..+|
T Consensus       104 ~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vd  182 (534)
T PLN03018        104 RDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQR-SETVD  182 (534)
T ss_pred             CcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCcee
Confidence            7777888764433332322  246655 59999999999999865444 4445556667789999998764322 33699


Q ss_pred             HHHHHHHHHHHHHhhhHcccccccc-------hhhHHHHHHHHHHHHHHhHH-------hhcc-ccccccc-ccccchHH
Q 008935          204 VSEWFQLLTEDVITRTAFGSSYEDG-------KAIFRLQAQQMELAAETFRK-------VFIP-GYRFLPT-KRNISSWK  267 (548)
Q Consensus       204 l~~~~~~~~~~ii~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------~~~p-~~~~lp~-~~~~~~~~  267 (548)
                      +.+++.+++++++++++||.+++..       .................+..       .++| ++.+++. ....+...
T Consensus       183 ~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  262 (534)
T PLN03018        183 VRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKV  262 (534)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHH
Confidence            9999999999999999999986421       11111111111111111110       1111 1111111 11122333


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCC-CCChHHHHHHHHHHHhchhHhH
Q 008935          268 LDKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSS-NITDYDIIEECKSFFFAGKQTT  346 (548)
Q Consensus       268 ~~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~-~l~~~ei~~~~~~~l~aG~dtt  346 (548)
                      ....+.+++.++++++++....          .  .......|+++.+++...+++. .++++++++++.++++||+|||
T Consensus       263 ~~~~~~~~~~~~i~~~~~~~~~----------~--~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTt  330 (534)
T PLN03018        263 NVNLVRSYNNPIIDERVELWRE----------K--GGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNP  330 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh----------c--cCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHH
Confidence            4456777888888877643100          0  0011246899999976544322 4899999999999999999999


Q ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCcccc-ceeecCCccccCEeeC
Q 008935          347 SNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIAT-IRRAKADVELGGYKIP  425 (548)
Q Consensus       347 a~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip  425 (548)
                      +++++|++++|++||++|+++++||+++++.++.++.+++++||||+|||+|+||++|++|.. .|.+.+|++++||.||
T Consensus       331 a~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~Ip  410 (534)
T PLN03018        331 ANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIP  410 (534)
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEEC
Confidence            999999999999999999999999999998777889999999999999999999999999985 6899999999999999


Q ss_pred             CCCEEEecccccccCCCCccCCCCCCCCCCCCcccccc-----cCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHh
Q 008935          426 RGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARA-----AKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQR  500 (548)
Q Consensus       426 kG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~  500 (548)
                      ||+.|+++.+++|+||++| +||++|+||||+++++..     ...+..|+|||+|+|.|+|+++|++|+++++++|+++
T Consensus       411 kGt~V~~~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~  489 (534)
T PLN03018        411 KGSHIHVCRPGLGRNPKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQG  489 (534)
T ss_pred             CCCEEEEChHHhcCCcccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999 999999999999653211     1235689999999999999999999999999999999


Q ss_pred             ceeEeCCCC-ccCC--ceeEEeccCCCceeEEeeC
Q 008935          501 FSFRLAPSY-QHAP--TVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       501 f~~~~~~~~-~~~~--~~~~~~~p~~~~~v~~~~r  532 (548)
                      |+|++.++. ....  ....+..| ++++|++++|
T Consensus       490 f~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R  523 (534)
T PLN03018        490 FNWKLHQDFGPLSLEEDDASLLMA-KPLLLSVEPR  523 (534)
T ss_pred             ceEEeCCCCCCCCccccccceecC-CCeEEEEEec
Confidence            999987653 2222  22334444 6999999999


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.9e-68  Score=541.74  Aligned_cols=456  Identities=25%  Similarity=0.413  Sum_probs=354.1

Q ss_pred             CCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhccCcc
Q 008935           52 RGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSKSEL  131 (548)
Q Consensus        52 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~~~~  131 (548)
                      -|-.|||++|..+++....           .  -+.+...+.+|+++|||||++++|+.+.++++||+++++|+++.+..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~   81 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDL-----------L--GGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSK   81 (489)
T ss_pred             CCCCCCccHHhHHhhHHHH-----------h--ccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhcccc
Confidence            4788999999998887632           1  12456689999999999999999999999999999999999876678


Q ss_pred             ccCCcchhhhhhhcCCceeecCCchHHhhhhhcCCCCCHHHHhhhHH-HHHHHHHHHHHHHHHhhcCCCceeeHHHHHHH
Q 008935          132 YEKNEANPLVKQLEGDGLLSLKGEKWAHHRKIITPTFHMENLKLLVP-VVAKSVTDMLDKWVAMSKSGSVEVEVSEWFQL  210 (548)
Q Consensus       132 f~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~vdl~~~~~~  210 (548)
                      |.++..+.....+++.++++.+|+.|+++|+++++.|+..++..+.+ .+.++++.+++.|.+... ++..+|+.++++.
T Consensus        82 f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~-~g~~vd~~~~~~~  160 (489)
T PLN02936         82 YAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL-SGEAVNMEAKFSQ  160 (489)
T ss_pred             ccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHH
Confidence            88765444444456788888999999999999999999988888755 788899999999986543 3347999999999


Q ss_pred             HHHHHHhhhHcccccccch---hhHHHHHHHHHHHHHHhHHhhccccc-----ccccccccchHHHHHHHHHHHHHHHHH
Q 008935          211 LTEDVITRTAFGSSYEDGK---AIFRLQAQQMELAAETFRKVFIPGYR-----FLPTKRNISSWKLDKQIKRSLTKLIEK  282 (548)
Q Consensus       211 ~~~~ii~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~-----~lp~~~~~~~~~~~~~l~~~l~~~i~~  282 (548)
                      +++++++.++||.+++..+   ++...+........ ......+|.+.     ++ .+..++..++.+.+.+++.+.+++
T Consensus       161 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~~-~p~~~~~~~~~~~i~~~~~~~i~~  238 (489)
T PLN02936        161 LTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAE-TRSTDLLPYWKVDFLCKI-SPRQIKAEKAVTVIRETVEDLVDK  238 (489)
T ss_pred             HHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHH-HhhhccchHHhhHHHhcc-ChhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999986422   22222222211111 01111222211     11 112334556777788888888877


Q ss_pred             HHhcCCchhhhhhhhcCCccc-ccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCc
Q 008935          283 RKANGNSKNKTMMATAMPQEE-QEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHP  361 (548)
Q Consensus       283 r~~~~~~~~~~~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p  361 (548)
                      +++.......     ...... ......|+++.|++..    .+++++++.++++.+++||+||||++++|++|+|++||
T Consensus       239 ~~~~~~~~~~-----~~~~~~~~~~~~~d~l~~ll~~~----~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p  309 (489)
T PLN02936        239 CKEIVEAEGE-----VIEGEEYVNDSDPSVLRFLLASR----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNP  309 (489)
T ss_pred             HHHHHhhccc-----ccccccccccCchHHHHHHHhcc----ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCH
Confidence            6542110000     000000 0123468999998754    25899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCCCCccccc-eeecCCccccCEeeCCCCEEEecccccccC
Q 008935          362 HWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLYPPIIATI-RRAKADVELGGYKIPRGTELLIPILAVHHD  440 (548)
Q Consensus       362 ~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d  440 (548)
                      ++|+++++|++++++. +.++++++++||||+|||+||||++|+++... |.+.+|+.++||.||||+.|+++.+++|||
T Consensus       310 ~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd  388 (489)
T PLN02936        310 EALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRS  388 (489)
T ss_pred             HHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCC
Confidence            9999999999999884 55799999999999999999999999998855 445677878999999999999999999999


Q ss_pred             CCCccCCCCCCCCCCCCccccc--ccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEE
Q 008935          441 QAIWGSEANDFNPARFSEGVAR--AAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLML  518 (548)
Q Consensus       441 ~~~~g~dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  518 (548)
                      |++| +||++|+||||+.++..  ....+..|+|||.|+|.|+|++||++|+++++++|+++|++++.++.+......++
T Consensus       389 ~~~~-~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~  467 (489)
T PLN02936        389 PEVW-ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGAT  467 (489)
T ss_pred             hhhC-CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceE
Confidence            9999 89999999999964321  11234589999999999999999999999999999999999998765443333466


Q ss_pred             eccCCCceeEEeeCCC
Q 008935          519 LYPQYGAPIIFQHLPN  534 (548)
Q Consensus       519 ~~p~~~~~v~~~~r~~  534 (548)
                      ..|+++++|++++|.-
T Consensus       468 ~~~~~~~~v~~~~R~~  483 (489)
T PLN02936        468 IHTTNGLYMTVSRRRV  483 (489)
T ss_pred             EeeCCCeEEEEEeeeC
Confidence            7788999999999853


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.2e-68  Score=535.93  Aligned_cols=434  Identities=21%  Similarity=0.285  Sum_probs=338.7

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      +.||||.++|++||+.++...           ...  .++..++.+|.++||++|++++++++.++++||+.+++++.++
T Consensus        30 ~lppgp~~~P~iG~~~~~~~~-----------~~~--~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~   96 (472)
T PLN02987         30 RLPPGSLGLPLVGETLQLISA-----------YKT--ENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNE   96 (472)
T ss_pred             CCcCCCcCCCchhhHHHHHhh-----------ccc--CChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCC
Confidence            368899999999999887431           000  1345578999999999999999999999999999999999987


Q ss_pred             CccccCCcchhhhhhhcC-CceeecCCchHHhhhhhcCCCCCHHHHhhhHH-HHHHHHHHHHHHHHHhhcCCCceeeHHH
Q 008935          129 SELYEKNEANPLVKQLEG-DGLLSLKGEKWAHHRKIITPTFHMENLKLLVP-VVAKSVTDMLDKWVAMSKSGSVEVEVSE  206 (548)
Q Consensus       129 ~~~f~~~~~~~~~~~~~g-~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~vdl~~  206 (548)
                      ...|.++... ....++| .++++.+|+.|+++|+++.+.++.+.++.+.. .+.+.++..++.|.       ..+|+.+
T Consensus        97 ~~~f~~~~~~-~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~  168 (472)
T PLN02987         97 GKLFECSYPG-SISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS-------SRVLLME  168 (472)
T ss_pred             CceEEecCcH-HHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc-------cceehHH
Confidence            7778665322 2234445 57888899999999999876445455544331 12233333333331       2589999


Q ss_pred             HHHHHHHHHHhhhHcccccccchh-hHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHh
Q 008935          207 WFQLLTEDVITRTAFGSSYEDGKA-IFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRKA  285 (548)
Q Consensus       207 ~~~~~~~~ii~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~  285 (548)
                      .+.+++++++++++||.+.++..+ +.....    .....+....+|++    ....++..++.+++.+++.++++++++
T Consensus       169 ~~~~~t~~vi~~~~fg~~~~~~~~~~~~~~~----~~~~~~~~~~~p~l----~~~~~~~~~~~~~~~~~~~~~i~~r~~  240 (472)
T PLN02987        169 EAKKITFELTVKQLMSFDPGEWTESLRKEYV----LVIEGFFSVPLPLF----STTYRRAIQARTKVAEALTLVVMKRRK  240 (472)
T ss_pred             HHHHHHHHHHHHHHcCCCChHHHHHHHHHHH----HHHhhhhcCCCcCC----CchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999987643221 111111    11111111223322    123456677888899999999988765


Q ss_pred             cCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHH
Q 008935          286 NGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQV  365 (548)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~  365 (548)
                      ....              ......|+++.+++..    .+++++++.++++.+++||+|||+++++|++++|++||++|+
T Consensus       241 ~~~~--------------~~~~~~d~l~~ll~~~----~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~  302 (472)
T PLN02987        241 EEEE--------------GAEKKKDMLAALLASD----DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALA  302 (472)
T ss_pred             hhhc--------------cCcccccHHHHHHhcC----CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHH
Confidence            3100              0123469999999763    258999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC---CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEecccccccCCC
Q 008935          366 LAREEVLRVCGS---RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQA  442 (548)
Q Consensus       366 ~lr~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d~~  442 (548)
                      ++++|++++.+.   +..++++++++|||++||++|+||++|+++.++|.+.+|++++||.||||+.|+++.+++|+||+
T Consensus       303 ~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~  382 (472)
T PLN02987        303 QLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHE  382 (472)
T ss_pred             HHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcc
Confidence            999999998752   34678999999999999999999999999988899999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEeccC
Q 008935          443 IWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQ  522 (548)
Q Consensus       443 ~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~  522 (548)
                      +| +||++|+||||+++... ...+..++|||+|+|.|+|+++|+.|++++++.|+++|+|++.++....+  ..+++|.
T Consensus       383 ~~-~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~p~  458 (472)
T PLN02987        383 YF-KDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FPTTRTQ  458 (472)
T ss_pred             cC-CCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cccccCC
Confidence            99 99999999999975322 12346799999999999999999999999999999999999987755433  4588999


Q ss_pred             CCceeEEeeCC
Q 008935          523 YGAPIIFQHLP  533 (548)
Q Consensus       523 ~~~~v~~~~r~  533 (548)
                      +++++++++|+
T Consensus       459 ~~~~~~~~~r~  469 (472)
T PLN02987        459 KRYPINVKRRD  469 (472)
T ss_pred             CCceEEEEecc
Confidence            99999999994


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.4e-67  Score=481.59  Aligned_cols=439  Identities=22%  Similarity=0.310  Sum_probs=358.2

Q ss_pred             CCCCCCC-CCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           50 GIRGPPY-HFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        50 ~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      .||.-.+ .||+|++..|++                  ++..|+++.++|||+||++.++|+.+.++.+|+....++...
T Consensus        32 ~PPli~gwiP~lG~a~~fgk------------------~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~   93 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGK------------------DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAK   93 (486)
T ss_pred             CCcccccCcchhhHHHHhcc------------------CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCc
Confidence            6788888 599999999877                  677899999999999999999999999999999999999865


Q ss_pred             CccccCCcch-hhhhhhcCCceee-cCCchHHhhhhhcCCCCCHHHHhhhHHHHHHHHHHHHHH-HHHhhcCCCceeeHH
Q 008935          129 SELYEKNEAN-PLVKQLEGDGLLS-LKGEKWAHHRKIITPTFHMENLKLLVPVVAKSVTDMLDK-WVAMSKSGSVEVEVS  205 (548)
Q Consensus       129 ~~~f~~~~~~-~~~~~~~g~~l~~-~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~~~~~vdl~  205 (548)
                      ...++-...+ ......+|.|+.. ..+....++.+++..++...+++++.+.|.+++.+.++. |.+    ++.+..+.
T Consensus        94 ~~~ld~~~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~----s~~~d~l~  169 (486)
T KOG0684|consen   94 LADLDFEEAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGE----SGETDGLY  169 (486)
T ss_pred             ccccCHHHHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhccccc----ccchhHhh
Confidence            4455444333 5666788888764 467888888899999999999999999999999999887 433    34455566


Q ss_pred             HHHHHHHHHHHhhhHccccccc-chhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 008935          206 EWFQLLTEDVITRTAFGSSYED-GKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRK  284 (548)
Q Consensus       206 ~~~~~~~~~ii~~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~  284 (548)
                      .+...+.+.+.-.+.+|..... +.+......+....+.  -....||.  ++|....++..++++++.+.+..++.+|+
T Consensus       170 ~~~~~ii~tAs~~ll~~e~r~~~d~~~a~l~~dLd~~F~--~~d~~FP~--~LP~~~~r~~~ra~~~i~k~f~~~i~~rr  245 (486)
T KOG0684|consen  170 TFCRLIIFTASRLLLGGEVRDQLDADVAKLYHDLDQGFQ--PFDFLFPY--NLPIPLLRRRDRARKKISKIFSKIILDRR  245 (486)
T ss_pred             hhhHHHhhhhHHHhhhhhhhhhhcchHHHHHHHHhcccc--chHhhccc--CCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            6666666666666666654433 1121111111111110  01122443  66777778888999999999999999988


Q ss_pred             hcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHH
Q 008935          285 ANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQ  364 (548)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~  364 (548)
                      +..                 +...+|+++.+++ ..+++...+++|+....+.+++||+.||+.+.+|++++|++|||++
T Consensus       246 ~s~-----------------s~~~~dmlq~l~~-~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~  307 (486)
T KOG0684|consen  246 ASI-----------------SKWDNDMLQSLME-KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQ  307 (486)
T ss_pred             hcc-----------------ccccHHHHHHHHH-HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHH
Confidence            862                 2355699999998 4445578999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCC-CCHHhhccChhHHHHHHHHhcCCCCccccceeecCCccccC----EeeCCCCEEEeccccccc
Q 008935          365 VLAREEVLRVCGSRDL-PTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELGG----YKIPRGTELLIPILAVHH  439 (548)
Q Consensus       365 ~~lr~Ei~~~~~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g----~~ipkG~~v~~~~~~~~~  439 (548)
                      +.+++|+.+++|+... ++++.+++||.|++||+|||||+||.+.+.|.+.+|.++.+    |.||||..|.++++.+|+
T Consensus       308 ~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr  387 (486)
T KOG0684|consen  308 KAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHR  387 (486)
T ss_pred             HHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccC
Confidence            9999999999988655 99999999999999999999999999999999999999976    999999999999999999


Q ss_pred             CCCCccCCCCCCCCCCCCcccccc----cCCCccccccCCCCcCccchHHHHHHHHHHHHHHHHhceeEeCCCCccCCce
Q 008935          440 DQAIWGSEANDFNPARFSEGVARA----AKHPVGFIPFGLGVRTCVGQNLAILQTKLALAIILQRFSFRLAPSYQHAPTV  515 (548)
Q Consensus       440 d~~~~g~dp~~F~P~R~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~  515 (548)
                      ||++| +||+.|+|+||+++++..    .+-.+.++|||+|+|.|||+.||.+|+++++..+|++||+++.++..+..+.
T Consensus       388 ~peif-~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~  466 (486)
T KOG0684|consen  388 DPEIF-PDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDY  466 (486)
T ss_pred             Ccccc-CChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCH
Confidence            99999 999999999999765432    1224557999999999999999999999999999999999999874443333


Q ss_pred             -eEEeccCCCceeEEeeCC
Q 008935          516 -LMLLYPQYGAPIIFQHLP  533 (548)
Q Consensus       516 -~~~~~p~~~~~v~~~~r~  533 (548)
                       .++..|.+++++++++|+
T Consensus       467 s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  467 SRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             HHhhcCCCCCceEEEeecC
Confidence             568889999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=3.2e-59  Score=465.56  Aligned_cols=416  Identities=15%  Similarity=0.211  Sum_probs=299.6

Q ss_pred             CCCCCCCCCCcccCHHHHHHHHHhhcCCCCCCCCcchhhhhhHHHHHHHHhCC-eEEEeeCCccE-------EEecCHHH
Q 008935           49 QGIRGPPYHFFIGNVKELVGMMLKASSQPMPCSHNILPRVLSFYHHWKKIYGG-TFLVWFGPTVR-------LAVSDPDL  120 (548)
Q Consensus        49 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-i~~~~~~~~~~-------vvv~dpe~  120 (548)
                      +.|||+.|+|++|++.++....             +..++..|+.+.++|||+ ||+++++|.|.       |++++||+
T Consensus        17 ~~PPg~~g~P~iG~~~~~~~~~-------------~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~   83 (480)
T PLN02648         17 REIPGSYGLPFLGAIKDRLDYF-------------YFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKS   83 (480)
T ss_pred             CCCCCCCCCcCcchhhhhhhHH-------------HhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCc
Confidence            3689999999999998876521             112445799999999999 99999998655       99999999


Q ss_pred             HHHHHhc----cCccccCCcchhhhhhhcC-C---ceeecCCchHHhhhhhcCCCCCHHHHhhhHHHHHHHHHHHHHHHH
Q 008935          121 IREVFTS----KSELYEKNEANPLVKQLEG-D---GLLSLKGEKWAHHRKIITPTFHMENLKLLVPVVAKSVTDMLDKWV  192 (548)
Q Consensus       121 v~~i~~~----~~~~f~~~~~~~~~~~~~g-~---~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~  192 (548)
                      ++.+|.+    ....|..... .... ++| .   +++..+|+.|+++|+++.++|+ .+++.+.+.|.+.++++++.|.
T Consensus        84 ~~~v~~~~~~~~~~~~~~~~~-~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~  160 (480)
T PLN02648         84 FPVLFDVSKVDKRDVFTGTYM-PSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWE  160 (480)
T ss_pred             eeeeecchhccccccceeeec-cCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHH
Confidence            9999975    4344554322 2333 666 4   6677899999999999999999 5778999999999999999996


Q ss_pred             HhhcCCCceeeHHHHHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHHHHhHHhhcccccccccccccchHHHHHHH
Q 008935          193 AMSKSGSVEVEVSEWFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAAETFRKVFIPGYRFLPTKRNISSWKLDKQI  272 (548)
Q Consensus       193 ~~~~~~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~l  272 (548)
                      ....++ ..+|+.+.+++++++++++++||.+.+. ..+...........   +....+|...              ..+
T Consensus       161 ~~~~~~-~~vdv~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~~~~~~~~~---~~~~~~p~~~--------------~~l  221 (480)
T PLN02648        161 AELAKK-GKAEFNDPLDQMAFNFLCKALTGKDPSE-TALGSDGPALIQKW---LALQLAPLAS--------------TGL  221 (480)
T ss_pred             HHHhhC-CCccccchHHHHHHHHHHHHHcCCCcch-hhhccchhHHHHHH---HHHHhhHHHH--------------cCc
Confidence            542223 3699999999999999999999987654 11211111111111   1000111100              000


Q ss_pred             HHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCCCCCChHHHHHHHHH-HHhchhHhHHHHHH
Q 008935          273 KRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSSSNITDYDIIEECKS-FFFAGKQTTSNLLT  351 (548)
Q Consensus       273 ~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~ei~~~~~~-~l~aG~dtta~~l~  351 (548)
                      ...+..++.++......     .. ..........-.+.++.+++...+  .+++++|+.++++. +.++|++|++++++
T Consensus       222 ~~~~~~~i~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~  293 (480)
T PLN02648        222 PHVLEELLLHTFPLPFF-----LV-KSDYDKLYDFFRASATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFP  293 (480)
T ss_pred             hHHHHHHhhcccCCchh-----hh-hccHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            11111111111000000     00 000000000000112233333222  25999999999875 44667888888999


Q ss_pred             HHHHHHhcCch-HHHHHHHHHHHHhCC-CCCCCHHhhccChhHHHHHHHHhcCCCCccccceeecCCcccc----CEeeC
Q 008935          352 WTTVLLAMHPH-WQVLAREEVLRVCGS-RDLPTRDDVAKLKTLSMILNESLRLYPPIIATIRRAKADVELG----GYKIP  425 (548)
Q Consensus       352 ~~l~~L~~~p~-~~~~lr~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~----g~~ip  425 (548)
                      |++|+|++||+ +|+++++||+++++. ++.++++++++||||++||+|+||++|+++++.|++.+|++++    ||.||
T Consensus       294 ~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~Ip  373 (480)
T PLN02648        294 ALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIK  373 (480)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEEC
Confidence            99999999995 999999999999863 4568999999999999999999999999999889999999996    79999


Q ss_pred             CCCEEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCcccccc---------CCCCcCccchHHHHHHHHHHHHH
Q 008935          426 RGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPF---------GLGVRTCVGQNLAILQTKLALAI  496 (548)
Q Consensus       426 kG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~l~~  496 (548)
                      ||+.|+++.+.+||||++| +||++|+|+||++++..   ....+++|         |+|+|.|+|++||++|+++++++
T Consensus       374 kG~~V~~~~~~~hrdp~~~-~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~  449 (480)
T PLN02648        374 KGEMLFGYQPLVTRDPKVF-DRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAE  449 (480)
T ss_pred             CCCEEEEChHHHhCCcccC-CCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHH
Confidence            9999999999999999999 99999999999864321   12233444         67789999999999999999999


Q ss_pred             HHHhce-eEeCCCCcc
Q 008935          497 ILQRFS-FRLAPSYQH  511 (548)
Q Consensus       497 ll~~f~-~~~~~~~~~  511 (548)
                      |+++|+ |++.++...
T Consensus       450 Ll~~f~~~~l~~~~~~  465 (480)
T PLN02648        450 LFLRYDSFEIEVDTSG  465 (480)
T ss_pred             HHHHhCEEeecCCccc
Confidence            999998 998776443


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=7e-56  Score=436.84  Aligned_cols=377  Identities=30%  Similarity=0.484  Sum_probs=311.2

Q ss_pred             HHHHHHHHhCCeEEEeeCCcc--EEEecCHHHHHHHHhccCccccCCcc----hhhhhhhcCCc-eeecCCchHHhhhhh
Q 008935           91 FYHHWKKIYGGTFLVWFGPTV--RLAVSDPDLIREVFTSKSELYEKNEA----NPLVKQLEGDG-LLSLKGEKWAHHRKI  163 (548)
Q Consensus        91 ~~~~~~~~yG~i~~~~~~~~~--~vvv~dpe~v~~i~~~~~~~f~~~~~----~~~~~~~~g~~-l~~~~g~~w~~~Rk~  163 (548)
                      +...+.+.||.++.++..+..  .+++++++.+++++.++ ..+++...    .......+|.+ +++.+|+.|.++||+
T Consensus        27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl  105 (411)
T COG2124          27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDP-RFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKL  105 (411)
T ss_pred             hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCc-ccccccccccccccchhhhccccceeecCCHHHHHHHHH
Confidence            455666778888887775543  79999999999999876 22333211    11234556655 788999999999999


Q ss_pred             cCCCCCHHHHhhhHHHHHHHHHHHHHHHHHhhcCCCceeeHHHHHHHHHHHHHhhhHcccccccchhhHHHHHHHHHHHH
Q 008935          164 ITPTFHMENLKLLVPVVAKSVTDMLDKWVAMSKSGSVEVEVSEWFQLLTEDVITRTAFGSSYEDGKAIFRLQAQQMELAA  243 (548)
Q Consensus       164 l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vdl~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~  243 (548)
                      ++++|+++.++.+.+.+.+.++++++.+ ..   + ..+++.+.+..+++++++ .+||.+.++......+.......  
T Consensus       106 ~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~---~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~--  177 (411)
T COG2124         106 LAPAFTPRALRGYRPLIREIADRLLDDL-WQ---G-GADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR--  177 (411)
T ss_pred             hccccCHHHHHHHHHHHHHHHHHHHHhc-cc---C-CchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc--
Confidence            9999999999999999999999999988 32   3 577899999999999999 89999887655544433322221  


Q ss_pred             HHhHHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhcCCcccccCCcccHHHHHHhhccCCC
Q 008935          244 ETFRKVFIPGYRFLPTKRNISSWKLDKQIKRSLTKLIEKRKANGNSKNKTMMATAMPQEEQEKGPKDLLGLMIQASSNSS  323 (548)
Q Consensus       244 ~~~~~~~~p~~~~lp~~~~~~~~~~~~~l~~~l~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  323 (548)
                            ..|  ...+.....+..++...+.+++.++|++|+..                    ..+|+++.++.+.++++
T Consensus       178 ------~~~--~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~--------------------~~~dlls~l~~a~~~~~  229 (411)
T COG2124         178 ------LDP--DLGPEEPWRRARAARRELDAYLRALIAERRAA--------------------PRDDLLSLLLSAEDDGG  229 (411)
T ss_pred             ------cCc--ccCCcccHHHHHHHHHHHHHHHHHHHHHhccC--------------------CcccHHHHHHHHhhCCC
Confidence                  001  11222334567788899999999999998743                    46799999999877754


Q ss_pred             CCCChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHhCCCCCCCHHhhccChhHHHHHHHHhcCC
Q 008935          324 SNITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVCGSRDLPTRDDVAKLKTLSMILNESLRLY  403 (548)
Q Consensus       324 ~~l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  403 (548)
                      ..+|++||.++++++++||+|||+++++|++|.|++||++++++++|.+.                ||+.++++|+||++
T Consensus       230 ~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~  293 (411)
T COG2124         230 GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLY  293 (411)
T ss_pred             CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhC
Confidence            46999999999999999999999999999999999999999999998654                89999999999999


Q ss_pred             CCccccceeecCCccccCEeeCCCCEEEecccccccCCCCccCCCCCCCCCCCCcccccccCCCccccccCCCCcCccch
Q 008935          404 PPIIATIRRAKADVELGGYKIPRGTELLIPILAVHHDQAIWGSEANDFNPARFSEGVARAAKHPVGFIPFGLGVRTCVGQ  483 (548)
Q Consensus       404 p~~~~~~R~~~~d~~l~g~~ipkG~~v~~~~~~~~~d~~~~g~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~  483 (548)
                      ||++.+.|.+++|++++|+.||||+.|+++++++||||++| +||++|+|+||.          ..++|||+|+|.|+|.
T Consensus       294 ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f-~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~  362 (411)
T COG2124         294 PPVPLARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVF-PDPDEFDPERFN----------NAHLPFGGGPHRCLGA  362 (411)
T ss_pred             CchhccceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhC-CChhhcCCCCCC----------CCCcCCCCCCccccCH
Confidence            99999889999999999999999999999999999999999 899999999996          5689999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhceeEeCCCCccCCceeEEeccCCCceeEEeeC
Q 008935          484 NLAILQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHL  532 (548)
Q Consensus       484 ~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  532 (548)
                      +||++|++++++.++++|++....+ ...+....+..|.++..+.++.+
T Consensus       363 ~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         363 ALARLELKVALAELLRRFPLLLLAE-PPPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHHHHhCchhhcCC-CCCccccccccCCCcceeeeecC
Confidence            9999999999999999999877665 23233455667777777777765


No 33 
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ.  Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane.  Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I.  Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center.  ccoQ, the fourth subunit, is a single transmembrane helix protein.  It has been shown to protect the core complex from proteolytic degradation by serine proteases.  See cd00919, cd01322
Probab=66.90  E-value=23  Score=22.75  Aligned_cols=18  Identities=22%  Similarity=0.346  Sum_probs=11.1

Q ss_pred             ChhhhHHHHHHHHHHHHH
Q 008935            1 MELEELLLFIINYWLKVV   18 (548)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~   18 (548)
                      |+..+++..+-+.|.+++
T Consensus         1 Md~~~~lr~~a~~~~l~~   18 (48)
T cd01324           1 MDIGETLRGLADSWGLLY   18 (48)
T ss_pred             CchHHHHHHHHHHHHHHH
Confidence            666667776666664443


No 34 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=65.74  E-value=26  Score=23.06  Aligned_cols=7  Identities=57%  Similarity=0.994  Sum_probs=5.6

Q ss_pred             CCCCCCC
Q 008935           50 GIRGPPY   56 (548)
Q Consensus        50 ~~pgp~~   56 (548)
                      +||||++
T Consensus        55 GPPGpp~   61 (62)
T COG4459          55 GPPGPPG   61 (62)
T ss_pred             CCCCCCC
Confidence            7888885


No 35 
>PF15050 SCIMP:  SCIMP protein
Probab=62.38  E-value=7.3  Score=30.05  Aligned_cols=30  Identities=17%  Similarity=0.303  Sum_probs=16.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHhcchHH
Q 008935           12 NYWLKVVVICLMVLFLVLKVAKGLWWTPRR   41 (548)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~   41 (548)
                      +.|+++++.++++...+.+++|......++
T Consensus         7 nFWiiLAVaII~vS~~lglIlyCvcR~~lR   36 (133)
T PF15050_consen    7 NFWIILAVAIILVSVVLGLILYCVCRWQLR   36 (133)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567666555555555556666655443333


No 36 
>PRK00523 hypothetical protein; Provisional
Probab=61.44  E-value=34  Score=24.01  Aligned_cols=23  Identities=13%  Similarity=-0.090  Sum_probs=11.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHH
Q 008935           13 YWLKVVVICLMVLFLVLKVAKGL   35 (548)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~~~~~   35 (548)
                      +|+++.++++++..++..++.+.
T Consensus         6 l~I~l~i~~li~G~~~Gffiark   28 (72)
T PRK00523          6 LALGLGIPLLIVGGIIGYFVSKK   28 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555555555555555544433


No 37 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=61.08  E-value=23  Score=22.69  Aligned_cols=42  Identities=12%  Similarity=0.158  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHHHHHHH
Q 008935          330 DIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEV  371 (548)
Q Consensus       330 ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei  371 (548)
                      +++..+..++-.|.|..+..++-.+.+.--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            566777888888999999999999999999999988888776


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=59.28  E-value=3.1  Score=36.28  Aligned_cols=44  Identities=23%  Similarity=0.350  Sum_probs=32.0

Q ss_pred             cChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEe
Q 008935          388 KLKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLI  432 (548)
Q Consensus       388 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~  432 (548)
                      .-..+.|||.|+.-+.... .+-=+..+|+.++|..||||+.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3456788999998776322 2333457899999999999997754


No 39 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=56.69  E-value=8.9  Score=27.29  Aligned_cols=18  Identities=11%  Similarity=0.150  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHHhHHh
Q 008935           19 VICLMVLFLVLKVAKGLW   36 (548)
Q Consensus        19 ~~~~~i~~~~~~~~~~~~   36 (548)
                      ++++.|+|++++.+|+.+
T Consensus        10 ~V~V~IVclliya~YRR~   27 (92)
T PHA02681         10 VIVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            555666776667777555


No 40 
>PRK01844 hypothetical protein; Provisional
Probab=56.42  E-value=48  Score=23.32  Aligned_cols=23  Identities=13%  Similarity=-0.086  Sum_probs=11.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHH
Q 008935           13 YWLKVVVICLMVLFLVLKVAKGL   35 (548)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~~~~~   35 (548)
                      .|+++.++++++..++..++.+.
T Consensus         5 ~~I~l~I~~li~G~~~Gff~ark   27 (72)
T PRK01844          5 LGILVGVVALVAGVALGFFIARK   27 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455555555555555554433


No 41 
>PHA03049 IMV membrane protein; Provisional
Probab=55.41  E-value=18  Score=24.67  Aligned_cols=18  Identities=22%  Similarity=0.490  Sum_probs=9.0

Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 008935           16 KVVVICLMVLFLVLKVAK   33 (548)
Q Consensus        16 ~~~~~~~~i~~~~~~~~~   33 (548)
                      +++++|++|+.++.+-+|
T Consensus         6 ~l~iICVaIi~lIvYgiY   23 (68)
T PHA03049          6 ILVIICVVIIGLIVYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            444555555544444455


No 42 
>PHA02902 putative IMV membrane protein; Provisional
Probab=53.84  E-value=25  Score=23.77  Aligned_cols=18  Identities=11%  Similarity=0.342  Sum_probs=10.1

Q ss_pred             HHHHHHHHHHHHHHhHHh
Q 008935           19 VICLMVLFLVLKVAKGLW   36 (548)
Q Consensus        19 ~~~~~i~~~~~~~~~~~~   36 (548)
                      +++++|+|++.+..|+++
T Consensus        10 ~v~v~Ivclliya~YrR~   27 (70)
T PHA02902         10 AVIVIIFCLLIYAAYKRY   27 (70)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            345556666656666444


No 43 
>PF08333 DUF1725:  Protein of unknown function (DUF1725);  InterPro: IPR013544 This domain is found at the C terminus of many eukaryotic and one bacterial sequence. Many of its members are annotated as being putative L1 retrotransposons or LINE-1 reverse transcriptase homologues. The region in question is found repeated in some family members. 
Probab=50.88  E-value=7.4  Score=19.64  Aligned_cols=11  Identities=45%  Similarity=0.715  Sum_probs=8.7

Q ss_pred             ChhhhHHHHHH
Q 008935            1 MELEELLLFII   11 (548)
Q Consensus         1 ~~~~~~~~~~~   11 (548)
                      ||||.++++.+
T Consensus         8 meLE~IiLse~   18 (20)
T PF08333_consen    8 MELENIILSEV   18 (20)
T ss_pred             HHHHHHHHHhh
Confidence            78988888764


No 44 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=50.36  E-value=12  Score=25.31  Aligned_cols=8  Identities=25%  Similarity=0.601  Sum_probs=6.3

Q ss_pred             CCCCCCcc
Q 008935          452 NPARFSEG  459 (548)
Q Consensus       452 ~P~R~l~~  459 (548)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78999863


No 45 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=48.30  E-value=15  Score=24.46  Aligned_cols=19  Identities=16%  Similarity=0.025  Sum_probs=16.3

Q ss_pred             HHHHHHhcCchHHHHHHHH
Q 008935          352 WTTVLLAMHPHWQVLAREE  370 (548)
Q Consensus       352 ~~l~~L~~~p~~~~~lr~E  370 (548)
                      -++.||.+||++.+++.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            3578999999999999864


No 46 
>PHA02902 putative IMV membrane protein; Provisional
Probab=47.45  E-value=28  Score=23.49  Aligned_cols=22  Identities=9%  Similarity=0.110  Sum_probs=16.3

Q ss_pred             HHHHHHHHHHHHHHHhHHhcch
Q 008935           18 VVICLMVLFLVLKVAKGLWWTP   39 (548)
Q Consensus        18 ~~~~~~i~~~~~~~~~~~~~~~   39 (548)
                      ++++++++.++++++|-.|.+.
T Consensus         6 fvi~~v~v~Ivclliya~YrR~   27 (70)
T PHA02902          6 FVILAVIVIIFCLLIYAAYKRY   27 (70)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            5677888888889888666443


No 47 
>PF07219 HemY_N:  HemY protein N-terminus;  InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=43.81  E-value=64  Score=25.05  Aligned_cols=24  Identities=29%  Similarity=0.647  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHHHhHHhcchHH
Q 008935           18 VVICLMVLFLVLKVAKGLWWTPRR   41 (548)
Q Consensus        18 ~~~~~~i~~~~~~~~~~~~~~~~~   41 (548)
                      .++.+++++++..++..++..|..
T Consensus        23 l~~~~~~l~ll~~ll~~~~~~p~~   46 (108)
T PF07219_consen   23 LLLLFVVLYLLLRLLRRLLSLPSR   46 (108)
T ss_pred             HHHHHHHHHHHHHHHHHHHhChHH
Confidence            333344445555555555555544


No 48 
>PF05545 FixQ:  Cbb3-type cytochrome oxidase component FixQ;  InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=42.69  E-value=90  Score=20.02  Aligned_cols=14  Identities=14%  Similarity=0.223  Sum_probs=5.7

Q ss_pred             hHHHHHHHHhCCCC
Q 008935           39 PRRIEDHFSKQGIR   52 (548)
Q Consensus        39 ~~~~~~~~~~~~~p   52 (548)
                      |+++.++.....+|
T Consensus        32 ~~~k~~~e~aa~lp   45 (49)
T PF05545_consen   32 PRNKKRFEEAANLP   45 (49)
T ss_pred             ccchhhHHHHHccC
Confidence            34344444433443


No 49 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.12  E-value=1.1e+02  Score=21.32  Aligned_cols=14  Identities=14%  Similarity=-0.083  Sum_probs=6.4

Q ss_pred             HHHHHHHHhCCCCC
Q 008935           40 RRIEDHFSKQGIRG   53 (548)
Q Consensus        40 ~~~~~~~~~~~~pg   53 (548)
                      ++...+.-+.+||-
T Consensus        26 rk~~~k~lk~NPpi   39 (71)
T COG3763          26 RKQMKKQLKDNPPI   39 (71)
T ss_pred             HHHHHHHHhhCCCC
Confidence            33344444456553


No 50 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=39.25  E-value=84  Score=25.30  Aligned_cols=42  Identities=24%  Similarity=0.452  Sum_probs=31.7

Q ss_pred             hhhhhhHHHHHHHHhCCeEEEeeCCccEEEecCHHHHHHHHhcc
Q 008935           85 LPRVLSFYHHWKKIYGGTFLVWFGPTVRLAVSDPDLIREVFTSK  128 (548)
Q Consensus        85 ~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~dpe~v~~i~~~~  128 (548)
                      -.+....+++|.++||.+-. . .+...+...|++.++++..++
T Consensus        73 P~~v~~~i~~w~~~~g~v~l-~-~~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   73 PQNVEQSIEDWARRYGRVRL-Y-KGAYLLECDDPELLDELLADP  114 (129)
T ss_pred             CHHHHHHHHHHHHhcCCEEE-e-cCeEEEEECCHHHHHHHHhCh
Confidence            34677899999999998532 1 235477899999999998753


No 51 
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=37.97  E-value=63  Score=17.92  Aligned_cols=16  Identities=19%  Similarity=0.397  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHHH
Q 008935           15 LKVVVICLMVLFLVLK   30 (548)
Q Consensus        15 ~~~~~~~~~i~~~~~~   30 (548)
                      .++.++++++.++++.
T Consensus         7 ~g~llv~lLl~YLvYA   22 (29)
T PRK14750          7 CGALLVLLLLGYLVYA   22 (29)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3444444445454443


No 52 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=35.74  E-value=42  Score=27.63  Aligned_cols=41  Identities=32%  Similarity=0.663  Sum_probs=29.2

Q ss_pred             ecCCccccCEeeCCCCEEEecccc-------cccCCCCccCCCCCCCCCC
Q 008935          413 AKADVELGGYKIPRGTELLIPILA-------VHHDQAIWGSEANDFNPAR  455 (548)
Q Consensus       413 ~~~d~~l~g~~ipkG~~v~~~~~~-------~~~d~~~~g~dp~~F~P~R  455 (548)
                      ..+|+.++|..||+|++-++.+..       ++++...||.  ..++|+.
T Consensus        52 f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~--~~Y~~~~   99 (145)
T PF11138_consen   52 FSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA--YNYDPSK   99 (145)
T ss_pred             ECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc--cccCchh
Confidence            357999999999999988776543       4667777763  4555543


No 53 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=34.16  E-value=63  Score=22.29  Aligned_cols=18  Identities=22%  Similarity=0.482  Sum_probs=9.1

Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 008935           16 KVVVICLMVLFLVLKVAK   33 (548)
Q Consensus        16 ~~~~~~~~i~~~~~~~~~   33 (548)
                      +++++|++|+.++++-+|
T Consensus         6 iLi~ICVaii~lIlY~iY   23 (68)
T PF05961_consen    6 ILIIICVAIIGLILYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            445555555544444444


No 54 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=33.86  E-value=11  Score=36.97  Aligned_cols=43  Identities=23%  Similarity=0.259  Sum_probs=31.7

Q ss_pred             ChhHHHHHHHHhcCCCCccccceeecCCccccCEeeCCCCEEEe
Q 008935          389 LKTLSMILNESLRLYPPIIATIRRAKADVELGGYKIPRGTELLI  432 (548)
Q Consensus       389 lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ipkG~~v~~  432 (548)
                      -..+.|||.|+.-+.-. ..+-=+..+|+.++|..|||||.|.-
T Consensus       255 ~n~I~A~V~~~qtv~~G-~~vrlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       255 RNTIRACVHETQTVVDG-SAVKLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCceEEEEcCceEEecC-CEEEEEEcCceeeCCEEecCCCEEEE
Confidence            45678999999887622 22333457899999999999997754


No 55 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=33.72  E-value=34  Score=27.49  Aligned_cols=24  Identities=13%  Similarity=0.317  Sum_probs=17.2

Q ss_pred             cCccchHHHHHHHHHHHHHHHHhc
Q 008935          478 RTCVGQNLAILQTKLALAIILQRF  501 (548)
Q Consensus       478 r~C~G~~~a~~~~~~~l~~ll~~f  501 (548)
                      -+|.|++||+.++-.++.+|+...
T Consensus        18 yN~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS-
T ss_pred             ecccchHHHHHHHHHHHHHHhcCC
Confidence            379999999999999999999763


No 56 
>PF06643 DUF1158:  Protein of unknown function (DUF1158);  InterPro: IPR010590 This family consists of several enterobacterial YbdJ proteins. The function of this family is unknown
Probab=32.77  E-value=1.4e+02  Score=20.86  Aligned_cols=13  Identities=15%  Similarity=0.716  Sum_probs=8.5

Q ss_pred             HHHHHHHhHHhcc
Q 008935           26 FLVLKVAKGLWWT   38 (548)
Q Consensus        26 ~~~~~~~~~~~~~   38 (548)
                      +++.+.++++|++
T Consensus        67 y~viRfiwrRwfs   79 (82)
T PF06643_consen   67 YFVIRFIWRRWFS   79 (82)
T ss_pred             HHHHHHHHHHHhh
Confidence            5566777777764


No 57 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=31.44  E-value=56  Score=24.01  Aligned_cols=19  Identities=26%  Similarity=0.440  Sum_probs=15.7

Q ss_pred             CchHHHHHHHHHHHHhCCC
Q 008935          360 HPHWQVLAREEVLRVCGSR  378 (548)
Q Consensus       360 ~p~~~~~lr~Ei~~~~~~~  378 (548)
                      .|+....+|+||-+++.+.
T Consensus        35 ~pd~l~~Lr~eIl~VI~KY   53 (88)
T COG0851          35 QPDYLEQLRKEILEVISKY   53 (88)
T ss_pred             CcchHHHHHHHHHHHHHHH
Confidence            3889999999999987643


No 58 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.54  E-value=43  Score=25.98  Aligned_cols=10  Identities=20%  Similarity=0.139  Sum_probs=6.8

Q ss_pred             CCcccCHHHH
Q 008935           57 HFFIGNVKEL   66 (548)
Q Consensus        57 ~p~~G~~~~~   66 (548)
                      -|+-||+...
T Consensus        46 ~p~YgNL~~~   55 (107)
T PF15330_consen   46 DPCYGNLELQ   55 (107)
T ss_pred             Cccccccccc
Confidence            5778887544


No 59 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=30.00  E-value=73  Score=23.28  Aligned_cols=9  Identities=44%  Similarity=0.715  Sum_probs=6.3

Q ss_pred             CCCCCCccc
Q 008935           53 GPPYHFFIG   61 (548)
Q Consensus        53 gp~~~p~~G   61 (548)
                      -|-+.|++|
T Consensus        63 rPIYrPvI~   71 (94)
T PF05393_consen   63 RPIYRPVIG   71 (94)
T ss_pred             CCccccccc
Confidence            355678888


No 60 
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=29.79  E-value=1.8e+02  Score=19.76  Aligned_cols=13  Identities=23%  Similarity=0.524  Sum_probs=6.9

Q ss_pred             ChhhhHHHHHHHHH
Q 008935            1 MELEELLLFIINYW   14 (548)
Q Consensus         1 ~~~~~~~~~~~~~~   14 (548)
                      |+. |++..+...|
T Consensus         1 ~~~-e~~~~~a~a~   13 (60)
T COG4736           1 MTY-EMMRGFADAW   13 (60)
T ss_pred             CcH-HHHHHHHHHH
Confidence            344 5555555555


No 61 
>PF04272 Phospholamban:  Phospholamban;  InterPro: IPR005984  Phospholamban (PLB) is a small protein (52 amino acids) that regulates the affinity of the cardiac sarcoplasmic reticulum Ca2+-ATPase (SERCA2a) for calcium. PLB is present in cardiac myocytes, in slow-twitch and smooth muscle and is expressed also in aorta endothelial cells in which it could play a role in tissue relaxation. The phosphorylation/dephosphorylation of phospholamban removes and restores, respectively, its inhibitory activity on SERCA2a. It has in fact been shown that phospholamban, in its non-phosphorylated form, binds to SERCA2a and inhibits this pump by lowering its affinity for Ca2+, whereas the phosphorylated form does not exert the inhibition. PLB is phosphorylated at two sites, namely at Ser-16 for a cAMP-dependent phosphokinase and at Thr-17 for a Ca2+/calmodulin-dependent phosphokinase, phosphorylation at Ser-16 being a prerequisite for the phosphorylation at Thr-17.   The structure of a 36-amino-acid-long N-terminal fragment of human phospholamban phosphorylated at Ser-16 and Thr-17 and Cys36Ser mutated was determined from nuclear magnetic resonance data. The peptide assumes a conformation characterised by two alpha-helices connected by an irregular strand, which comprises the amino acids from Arg-13 to Pro-21. The proline is in a trans conformation. The two phosphate groups on Ser-16 and Thr-17 are shown to interact preferably with the side chains of Arg-14 and Arg-13, respectively [].; GO: 0005246 calcium channel regulator activity, 0042030 ATPase inhibitor activity, 0006816 calcium ion transport, 0016020 membrane; PDB: 1N7L_A 1FJP_A 1FJK_A 2HYN_C 1ZLL_D 1PLP_A 3O7L_I.
Probab=29.55  E-value=1.1e+02  Score=18.91  Aligned_cols=10  Identities=30%  Similarity=1.125  Sum_probs=4.3

Q ss_pred             HHHHHHHHHH
Q 008935           19 VICLMVLFLV   28 (548)
Q Consensus        19 ~~~~~i~~~~   28 (548)
                      ++|++++|++
T Consensus        39 licllli~ii   48 (52)
T PF04272_consen   39 LICLLLICII   48 (52)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            3444444433


No 62 
>TIGR01294 P_lamban phospholamban. This model represents the short (52 residue) transmembrane phosphoprotein phospholamban. Phospholamban, in its unphosphorylated form, inhibits SERCA2, the cardiac sarcoplasmic reticulum Ca-ATPase.
Probab=29.23  E-value=1.3e+02  Score=18.68  Aligned_cols=10  Identities=30%  Similarity=1.125  Sum_probs=4.4

Q ss_pred             HHHHHHHHHH
Q 008935           19 VICLMVLFLV   28 (548)
Q Consensus        19 ~~~~~i~~~~   28 (548)
                      ++|++++|++
T Consensus        39 licllli~ii   48 (52)
T TIGR01294        39 LICLLLICII   48 (52)
T ss_pred             HHHHHHHHHH
Confidence            3444444443


No 63 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=28.68  E-value=44  Score=24.51  Aligned_cols=21  Identities=19%  Similarity=0.442  Sum_probs=17.5

Q ss_pred             HHHHHHHHHHHHhceeEeCCC
Q 008935          488 LQTKLALAIILQRFSFRLAPS  508 (548)
Q Consensus       488 ~~~~~~l~~ll~~f~~~~~~~  508 (548)
                      ..|+-++..+|+.|||+|.+-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            357789999999999998753


No 64 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=27.73  E-value=28  Score=22.78  Aligned_cols=11  Identities=45%  Similarity=0.918  Sum_probs=9.1

Q ss_pred             cccCCCCcCcc
Q 008935          471 IPFGLGVRTCV  481 (548)
Q Consensus       471 ~~Fg~G~r~C~  481 (548)
                      .+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            47999999883


No 65 
>PRK06789 flagellar motor switch protein; Validated
Probab=27.35  E-value=70  Score=22.84  Aligned_cols=39  Identities=15%  Similarity=0.110  Sum_probs=30.0

Q ss_pred             HHHHHhcCCCCccc-cceeecC--CccccCEeeCCCCEEEec
Q 008935          395 ILNESLRLYPPIIA-TIRRAKA--DVELGGYKIPRGTELLIP  433 (548)
Q Consensus       395 ~i~E~lRl~p~~~~-~~R~~~~--d~~l~g~~ipkG~~v~~~  433 (548)
                      -++|-+.|.+..-. +-|.+.+  |+.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            37888999876655 5566666  455689999999999875


No 66 
>PF13131 DUF3951:  Protein of unknown function (DUF3951)
Probab=26.76  E-value=1e+02  Score=19.86  Aligned_cols=25  Identities=8%  Similarity=0.400  Sum_probs=15.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHhcch
Q 008935           15 LKVVVICLMVLFLVLKVAKGLWWTP   39 (548)
Q Consensus        15 ~~~~~~~~~i~~~~~~~~~~~~~~~   39 (548)
                      +++.++.+++.+++.++.|..+.+.
T Consensus         6 iG~~~~~~~I~~lIgfity~mfV~K   30 (53)
T PF13131_consen    6 IGIILFTIFIFFLIGFITYKMFVKK   30 (53)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhheec
Confidence            3445555556666667777776653


No 67 
>PRK14748 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=26.57  E-value=1.2e+02  Score=16.82  Aligned_cols=17  Identities=24%  Similarity=0.491  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 008935           15 LKVVVICLMVLFLVLKV   31 (548)
Q Consensus        15 ~~~~~~~~~i~~~~~~~   31 (548)
                      .+..++++++.|+++-+
T Consensus         7 ~G~ilv~lLlgYLvyAL   23 (29)
T PRK14748          7 TGVLLVFLLLGYLVYAL   23 (29)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            34444445555555443


No 68 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=26.54  E-value=54  Score=18.84  Aligned_cols=16  Identities=19%  Similarity=0.347  Sum_probs=12.9

Q ss_pred             CCccccccCCCCcCcc
Q 008935          466 HPVGFIPFGLGVRTCV  481 (548)
Q Consensus       466 ~~~~~~~Fg~G~r~C~  481 (548)
                      ....|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3567999999899994


No 69 
>PF10215 Ost4:  Oligosaccaryltransferase  ;  InterPro: IPR018943  Ost4 is a very short, approximately 30 residues, enzyme found from fungi to vertebrates. It is a member of the ER oligosaccaryltansferase complex, 2.4.1.119 from EC, that catalyses the asparagine-linked glycosylation of proteins. It appears to be an integral membrane protein that mediates the en bloc transfer of a pre-assembled high-mannose oligosaccharide onto asparagine residues of nascent polypeptides as they enter the lumen of the rough endoplasmic reticulum. ; PDB: 1RKL_A 2LAT_A.
Probab=25.23  E-value=1.6e+02  Score=17.52  Aligned_cols=22  Identities=27%  Similarity=0.668  Sum_probs=13.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Q 008935            5 ELLLFIINYWLKVVVICLMVLF   26 (548)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~i~~   26 (548)
                      +.-|..+..+++.++.+++++|
T Consensus         4 D~qL~~lan~lG~~~~~LIVlY   25 (35)
T PF10215_consen    4 DVQLYTLANFLGVAAMVLIVLY   25 (35)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3445556666666666666654


No 70 
>PF10669 Phage_Gp23:  Protein gp23 (Bacteriophage A118);  InterPro: IPR018926  This entry is represented by the major tail subunit protein, Gp23 of Listeria phage A118 and prophage found in Bacilli. The function is currently unknown. 
Probab=24.23  E-value=3e+02  Score=20.50  Aligned_cols=25  Identities=16%  Similarity=0.445  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHHHHHhHHhcchH
Q 008935           16 KVVVICLMVLFLVLKVAKGLWWTPR   40 (548)
Q Consensus        16 ~~~~~~~~i~~~~~~~~~~~~~~~~   40 (548)
                      .+++.+.++++++++++...-|+.+
T Consensus        17 ~~FA~L~i~~FiILLIi~~~IW~~~   41 (121)
T PF10669_consen   17 MFFAFLFIVVFIILLIITKSIWHDS   41 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            3344445555555555543333333


No 71 
>PRK03814 oxaloacetate decarboxylase subunit gamma; Provisional
Probab=24.07  E-value=2.7e+02  Score=20.58  Aligned_cols=13  Identities=15%  Similarity=0.220  Sum_probs=5.4

Q ss_pred             ChhhhHHHHHHHH
Q 008935            1 MELEELLLFIINY   13 (548)
Q Consensus         1 ~~~~~~~~~~~~~   13 (548)
                      |...|.+.--+.+
T Consensus         2 m~~~~~l~~~~~l   14 (85)
T PRK03814          2 TDIGSLLVDAATL   14 (85)
T ss_pred             CcHHHHHHHHHHH
Confidence            3344444434433


No 72 
>PF06084 Cytomega_TRL10:  Cytomegalovirus TRL10 protein;  InterPro: IPR009284 This family consists of several Cytomegalovirus TRL10 proteins. TRL10 represents a structural component of the virus particle and like the other HCMV envelope glycoproteins, is present in a disulphide-linked complex [].
Probab=23.43  E-value=48  Score=25.30  Aligned_cols=28  Identities=21%  Similarity=0.406  Sum_probs=15.3

Q ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Q 008935            6 LLLFIINYW-LKVVVICLMVLFLVLKVAK   33 (548)
Q Consensus         6 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~   33 (548)
                      .||.+.+.| .+-++..+||++++++++|
T Consensus        52 s~lg~ysawgagsfiatliillviffviy   80 (150)
T PF06084_consen   52 SMLGIYSAWGAGSFIATLIILLVIFFVIY   80 (150)
T ss_pred             hhhhhhhhcccchHHHHHHHHHHHhheeE
Confidence            356677778 4444444555544545555


No 73 
>PHA02680 ORF090 IMV phosphorylated membrane protein; Provisional
Probab=22.91  E-value=1.6e+02  Score=21.59  Aligned_cols=28  Identities=21%  Similarity=0.084  Sum_probs=16.9

Q ss_pred             ChhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008935            1 MELEELLLFIINYWLKVVVICLMVLFLV   28 (548)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~   28 (548)
                      |.+.|.+...++..+...++++++.|+.
T Consensus         1 MDi~~~i~ny~s~vli~GIiLL~~ACIF   28 (91)
T PHA02680          1 MDIFETLKSYYSGVLICGVLLLTAACVF   28 (91)
T ss_pred             CcHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence            6677777777776555555545554533


No 74 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=22.45  E-value=1.9e+02  Score=18.74  Aligned_cols=34  Identities=3%  Similarity=-0.083  Sum_probs=23.8

Q ss_pred             HHHHHHhCCeEEEeeCCcc----EEEecCHHHHHHHHh
Q 008935           93 HHWKKIYGGTFLVWFGPTV----RLAVSDPDLIREVFT  126 (548)
Q Consensus        93 ~~~~~~yG~i~~~~~~~~~----~vvv~dpe~v~~i~~  126 (548)
                      .+..++||+|-.+.+....    .|-..+++.++.+..
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            4556789999888775532    566778888888775


No 75 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=22.36  E-value=2.7e+02  Score=20.50  Aligned_cols=50  Identities=12%  Similarity=0.062  Sum_probs=40.0

Q ss_pred             CChHHHHHHHHHHHhchhHhHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Q 008935          326 ITDYDIIEECKSFFFAGKQTTSNLLTWTTVLLAMHPHWQVLAREEVLRVC  375 (548)
Q Consensus       326 l~~~ei~~~~~~~l~aG~dtta~~l~~~l~~L~~~p~~~~~lr~Ei~~~~  375 (548)
                      ...+.........++-=+..++....-.+.+-++||+..+++.+.+..-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34455556666777888888899999999999999999999999887644


No 76 
>PF15048 OSTbeta:  Organic solute transporter subunit beta protein
Probab=21.47  E-value=91  Score=24.68  Aligned_cols=9  Identities=33%  Similarity=0.534  Sum_probs=4.2

Q ss_pred             hhhHHHHHH
Q 008935            3 LEELLLFII   11 (548)
Q Consensus         3 ~~~~~~~~~   11 (548)
                      +-|.|+|+|
T Consensus        19 ~LEemlW~f   27 (125)
T PF15048_consen   19 LLEEMLWFF   27 (125)
T ss_pred             HHHHHHHhe
Confidence            334455454


No 77 
>CHL00145 psaD photosystem I subunit II; Validated
Probab=21.26  E-value=1.1e+02  Score=24.13  Aligned_cols=55  Identities=29%  Similarity=0.360  Sum_probs=33.7

Q ss_pred             cccCCCCcCccchH---HHHHHHHHHHHHHHH-hceeEeCCCCccCCc-eeEEeccCCCc
Q 008935          471 IPFGLGVRTCVGQN---LAILQTKLALAIILQ-RFSFRLAPSYQHAPT-VLMLLYPQYGA  525 (548)
Q Consensus       471 ~~Fg~G~r~C~G~~---~a~~~~~~~l~~ll~-~f~~~~~~~~~~~~~-~~~~~~p~~~~  525 (548)
                      +|=|+..-+--|.+   ||+.|-.++|.+-|+ .|+++--+=+..-|. ....++|++|+
T Consensus        43 mPTGGAA~M~~G~NLlylARKEQclALgtQLrtkfKI~dyKIYRifP~Ge~~~LhPkDGV  102 (139)
T CHL00145         43 MPTGGAAIMRNGENLLYLARKEQCLALGTQLRTKFKINDYKIYRIFPNGEVQYLHPKDGV  102 (139)
T ss_pred             cCCchhhhhhcCchhhhhhHHHHHHHHHHHHhhcccccccEEEEECCCCceEEecCCCCC
Confidence            56666666666765   699999999999999 487642111111111 12356777764


No 78 
>PF11044 TMEMspv1-c74-12:  Plectrovirus spv1-c74 ORF 12 transmembrane protein;  InterPro: IPR022743  This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function. 
Probab=21.18  E-value=2.2e+02  Score=17.74  Aligned_cols=10  Identities=10%  Similarity=0.245  Sum_probs=3.9

Q ss_pred             HHHHHHHHHH
Q 008935           22 LMVLFLVLKV   31 (548)
Q Consensus        22 ~~i~~~~~~~   31 (548)
                      .+.+|+.+.+
T Consensus        16 ~If~~iGl~I   25 (49)
T PF11044_consen   16 GIFAWIGLSI   25 (49)
T ss_pred             HHHHHHHHHH
Confidence            3333444333


No 79 
>PHA03162 hypothetical protein; Provisional
Probab=20.68  E-value=59  Score=25.87  Aligned_cols=24  Identities=13%  Similarity=0.217  Sum_probs=19.9

Q ss_pred             CCCCcCccchHHHHHHHHHHHHHH
Q 008935          474 GLGVRTCVGQNLAILQTKLALAII  497 (548)
Q Consensus       474 g~G~r~C~G~~~a~~~~~~~l~~l  497 (548)
                      ++|.+.|||+...+.++..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999999999887766654


No 80 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=20.54  E-value=55  Score=28.82  Aligned_cols=21  Identities=24%  Similarity=0.504  Sum_probs=18.3

Q ss_pred             ccccccCCCCccCCCCCCCCCC
Q 008935          434 ILAVHHDQAIWGSEANDFNPAR  455 (548)
Q Consensus       434 ~~~~~~d~~~~g~dp~~F~P~R  455 (548)
                      .+.-+.|+.+| .|...|+|-|
T Consensus       191 W~~~n~~~~FY-~d~~~FRp~R  211 (212)
T PF11227_consen  191 WWPDNEDPAFY-DDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCcccc-cCccccCCCC
Confidence            45568999999 9999999988


No 81 
>PF11120 DUF2636:  Protein of unknown function (DUF2636);  InterPro: IPR019995  Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process []. Members average about 63 amino acids in length and are not uncharacterised. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F). 
Probab=20.00  E-value=2.6e+02  Score=19.17  Aligned_cols=9  Identities=22%  Similarity=1.265  Sum_probs=3.8

Q ss_pred             HHHHHHHHH
Q 008935           18 VVICLMVLF   26 (548)
Q Consensus        18 ~~~~~~i~~   26 (548)
                      +++|++|.+
T Consensus        10 i~l~AlI~~   18 (62)
T PF11120_consen   10 IILCALIFF   18 (62)
T ss_pred             HHHHHHHHH
Confidence            334444443


Done!