BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008936
(548 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55CA6|Y0146_DICDI Probable serine/threonine-protein kinase DDB_G0270146
OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1
Length = 635
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 112 LNELARRKGVLEENLKLAHDLKVAEDERY--FFMSSMLGLLADYGLWPHVTNASA----- 164
L L R G LE +LK DLK D +Y +SSM + +TN+
Sbjct: 426 LQLLRLRVGELETDLKKEQDLKKDSDRKYREILLSSMHYIYIIDSTMNTITNSGGQSIKP 485
Query: 165 -ISNTVKHLYDQLQSQIRTSY 184
ISN V HL ++ QI T Y
Sbjct: 486 QISNDVNHLRSIMRDQIETEY 506
>sp|Q495X7|TRI60_HUMAN Tripartite motif-containing protein 60 OS=Homo sapiens GN=TRIM60
PE=2 SV=2
Length = 471
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 19 KNSDFVNRHKIETHLAPTK---QKEDNFISFQDREAMELYSRARMQKEEIHSLRQQIAVA 75
K + +R +E L P + ++ + I Q +++EL + ++EEI+S +QI
Sbjct: 134 KKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSVELKKKVEYKREEINSEFEQI--- 190
Query: 76 CLKELQLQNEKYTLERKVSELRMAIDEKQNEAITSALNELARRKGVLEE 124
L LQNE+ + R++ + M I K NE + + ++ K +L E
Sbjct: 191 ---RLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTLKHLLRE 236
>sp|Q60902|EP15R_MOUSE Epidermal growth factor receptor substrate 15-like 1 OS=Mus
musculus GN=Eps15l1 PE=1 SV=3
Length = 907
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 63 EEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQNEAITSALNELARRKGVL 122
+E+ + Q+IA QLQ EKY+LE+ + E AI +K +E + N+L R L
Sbjct: 382 KELDDISQEIA-------QLQREKYSLEQDIREKEEAIRQKTSE-VQELQNDLDRETSSL 433
Query: 123 EENLKLAHDLKVAEDERYFFMSSMLGLLADYGLWPHVTNASAISNTVKHLYDQLQSQIRT 182
+E D + DE + + +L+D + T+ L Q+QSQ
Sbjct: 434 QELEAQKQDAQDRLDEMDQQKAKLRDMLSDV-----RQKCQDETQTISSLKTQIQSQESD 488
Query: 183 SYDRIRDLTR 192
+ DL R
Sbjct: 489 LKSQEDDLNR 498
>sp|Q9UBC2|EP15R_HUMAN Epidermal growth factor receptor substrate 15-like 1 OS=Homo
sapiens GN=EPS15L1 PE=1 SV=1
Length = 864
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 63 EEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQNEAITSALNELARRKGVL 122
+E+ + Q+IA QLQ EKY+LE+ + E AI +K +E + N+L R L
Sbjct: 384 KELDDISQEIA-------QLQREKYSLEQDIREKEEAIRQKTSE-VQELQNDLDRETSSL 435
Query: 123 EE 124
+E
Sbjct: 436 QE 437
>sp|O55098|STK10_MOUSE Serine/threonine-protein kinase 10 OS=Mus musculus GN=Stk10 PE=1
SV=2
Length = 966
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 47 QDREAMELYSRARMQKEEIHSLRQQ---------IAVAC---LKELQ-LQNEKYTL--ER 91
+ RE ++ +S+ ++++ L+QQ + C + ELQ LQNEK L E
Sbjct: 834 EQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESNMSELQQLQNEKCHLLVEH 893
Query: 92 KVSELRMAIDEKQNEAITSALNELARRKGVLEENLKLAHDLKVAEDERYFFMS 144
+ +L+ A+DE N+++ ++L RK LEE+L + K E E +F +S
Sbjct: 894 ETQKLK-ALDESHNQSLKEWRDKLRPRKKALEEDL----NQKKREQEMFFKLS 941
>sp|E9PTG8|STK10_RAT Serine/threonine-protein kinase 10 OS=Rattus norvegicus GN=Stk10
PE=2 SV=1
Length = 967
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 47 QDREAMELYSRARMQKEEIHSLRQQ---------IAVAC---LKELQ-LQNEKYTL--ER 91
+ RE ++ +S+ ++++ L+QQ + C + ELQ LQNEK L E
Sbjct: 835 EQREKVKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESNMNELQQLQNEKCHLLVEH 894
Query: 92 KVSELRMAIDEKQNEAITSALNELARRKGVLEENLKLAHDLKVAEDERYFFMS 144
+ +L+ A+DE N+++ ++L RK LEE+L + K E E +F +S
Sbjct: 895 ETQKLK-ALDESHNQSLKEWRDKLRPRKKALEEDL----NQKKREQEMFFRLS 942
>sp|O58107|GAL1_PYRHO Galactokinase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=galK PE=1 SV=1
Length = 350
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 426 MDSSENWEQATLILRRSIYRIKIDSTEAIIEERFPKEVSIKVPCGLSTQFVLTFS 480
+ SS ++E L +Y +K+DS ++ + + + VPCG+ QF + F
Sbjct: 102 LSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFG 156
>sp|Q7TME2|SPAG5_MOUSE Sperm-associated antigen 5 OS=Mus musculus GN=Spag5 PE=1 SV=1
Length = 1165
Score = 33.1 bits (74), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 49 REAMELYSRARMQKEEIHSLRQQIAVACLKELQLQNEKYTLERKVSELRMAIDEKQNEAI 108
RE EL+SR + Q+EE Q+ A +++ N+ L RK + + + +KQNE I
Sbjct: 972 REICELHSRLQAQEEE----HQEALKAKEADMEKLNQALCLLRKNEKELLEVIQKQNEKI 1027
Query: 109 TSALNELARRKGVLEENLKLAHDLKVAEDERYFFMSSMLGLL 150
+++ + + EE +L L+ AE E ++ G L
Sbjct: 1028 LGQIDKSGQLINLREEVTQLTQSLRRAETETKVLQEALEGQL 1069
>sp|Q48NL1|PROB_PSE14 Glutamate 5-kinase OS=Pseudomonas syringae pv. phaseolicola (strain
1448A / Race 6) GN=proB PE=3 SV=1
Length = 368
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 313 QIIGEATPGEKLLGCGYPVRGTTLCMFQWVR-HLQD-GTRHYIEGATNPEYVVTADDVDK 370
+++ GE+L P RG QW+ HLQ GT +GA A D
Sbjct: 240 RVLARLKGGERLGTLLSPERGMLAARKQWLAGHLQTRGTLVLDDGAV----AALAKDQKS 295
Query: 371 LIAVECIPMDDQGRQGELVRRFANDQNKIKCDLGMQSEIDAYISRGHATFSVL 423
L+ V + R+GE+V A+D +I L S I+A GH++ S++
Sbjct: 296 LLPVGVKLVQGSFRRGEMVVCVASDGREIARGLSNYSAIEAQKIIGHSSESIV 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,366,964
Number of Sequences: 539616
Number of extensions: 8515130
Number of successful extensions: 27042
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 26842
Number of HSP's gapped (non-prelim): 397
length of query: 548
length of database: 191,569,459
effective HSP length: 123
effective length of query: 425
effective length of database: 125,196,691
effective search space: 53208593675
effective search space used: 53208593675
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)