Query 008937
Match_columns 548
No_of_seqs 197 out of 382
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 15:07:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008937.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008937hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 98.5 1.2E-07 4.1E-12 94.2 6.6 199 2-268 56-264 (279)
2 3hve_A Gigaxonin; ubiquitin, c 98.4 2.3E-07 7.9E-12 90.9 5.5 130 2-160 52-186 (256)
3 2vkp_A BTB/POZ domain-containi 98.2 1.2E-06 4E-11 74.6 6.0 76 2-86 33-108 (109)
4 1buo_A POZ domain, protein (pr 98.2 1.5E-06 5.2E-11 75.9 6.0 72 2-86 49-120 (121)
5 2if5_A Zinc finger and BTB dom 98.2 1.8E-06 6.3E-11 74.9 5.6 75 2-84 46-120 (120)
6 3htm_A Speckle-type POZ protei 98.2 3E-06 1E-10 77.4 7.0 105 2-123 55-162 (172)
7 3b84_A Zinc finger and BTB dom 98.1 1.5E-06 5.1E-11 75.9 4.7 73 2-86 45-117 (119)
8 2vpk_A Myoneurin; transcriptio 98.1 3.7E-06 1.3E-10 72.7 6.1 72 2-85 43-116 (116)
9 1r29_A B-cell lymphoma 6 prote 98.1 5.7E-06 2E-10 72.6 6.6 75 2-85 50-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 98.0 4.8E-06 1.6E-10 75.4 5.6 74 2-83 68-143 (144)
11 2yy9_A Zinc finger and BTB dom 98.0 2.6E-06 8.7E-11 76.2 3.6 74 2-87 46-119 (135)
12 4eoz_A Speckle-type POZ protei 98.0 1.6E-06 5.6E-11 77.0 2.0 94 2-112 46-139 (145)
13 2z8h_A Transcription regulator 98.0 1E-05 3.4E-10 72.4 6.8 76 2-87 57-133 (138)
14 3ga1_A Nucleus accumbens-assoc 98.0 2.4E-06 8.3E-11 75.4 2.6 73 2-86 54-127 (129)
15 2q81_A MIZ-1 protein; BTB/POZ 98.0 4.9E-06 1.7E-10 72.6 4.2 70 2-84 48-117 (119)
16 3ohu_A Transcription regulator 97.9 5.6E-06 1.9E-10 72.5 2.8 63 2-68 53-116 (125)
17 2ihc_A Transcription regulator 97.6 1.5E-05 5.2E-10 69.9 2.2 72 2-83 50-122 (124)
18 3m5b_A Zinc finger and BTB dom 97.6 3.6E-05 1.2E-09 67.7 4.0 57 21-85 61-117 (119)
19 3hqi_A Speckle-type POZ protei 97.6 6E-05 2E-09 75.6 5.9 106 2-124 195-303 (312)
20 3fkc_A Transcriptional regulat 97.6 5.4E-05 1.8E-09 65.9 4.6 60 2-68 52-112 (116)
21 4ajy_C Transcription elongatio 96.0 0.0095 3.3E-07 50.5 5.8 62 2-65 22-96 (97)
22 2ast_A S-phase kinase-associat 95.7 0.0063 2.2E-07 56.1 3.7 79 2-88 21-127 (159)
23 1fs1_B SKP1, cyclin A/CDK2-ass 92.2 0.069 2.4E-06 48.3 2.8 74 2-87 22-121 (141)
24 2p1m_A SKP1-like protein 1A; F 91.8 0.054 1.8E-06 50.0 1.6 75 2-87 24-125 (160)
25 2yy0_A C-MYC-binding protein; 83.9 1.7 5.7E-05 33.4 5.1 34 461-494 18-51 (53)
26 3v7d_A Suppressor of kinetocho 79.9 2.1 7.1E-05 39.8 5.2 78 2-87 27-133 (169)
27 3vmx_A Voltage-gated hydrogen 79.8 3.3 0.00011 31.3 5.2 36 462-497 4-39 (48)
28 2fnj_C Transcription elongatio 78.1 1.2 4.3E-05 37.5 2.8 63 2-66 21-96 (96)
29 1deb_A APC protein, adenomatou 74.0 6.1 0.00021 30.1 5.3 38 459-496 14-51 (54)
30 1hv2_A Elongin C, ELC1; protei 70.3 2.3 7.7E-05 36.1 2.5 62 2-66 24-99 (99)
31 3a2a_A Voltage-gated hydrogen 67.7 7.8 0.00027 30.1 4.7 34 464-497 13-46 (58)
32 3vp9_A General transcriptional 63.5 7.7 0.00026 33.1 4.4 26 469-494 50-75 (92)
33 1vcb_B Protein (elongin C); tu 59.9 3.4 0.00012 35.9 1.7 63 2-66 37-112 (112)
34 1vjh_A BET V I allergen family 51.3 9.5 0.00032 33.2 3.1 33 344-387 90-122 (122)
35 1dip_A Delta-sleep-inducing pe 38.9 30 0.001 28.4 3.9 33 459-491 12-44 (78)
36 1pd7_B MAD1; PAH2, SIN3, eukar 33.2 14 0.00046 24.5 0.8 17 52-68 3-19 (26)
37 3b0b_C CENP-X, centromere prot 31.6 27 0.00091 29.0 2.6 42 301-345 7-48 (81)
38 2wt7_B Transcription factor MA 31.5 70 0.0024 27.0 5.2 36 460-495 53-88 (90)
39 4dzn_A Coiled-coil peptide CC- 30.8 1.1E+02 0.0038 20.7 5.0 28 463-490 3-30 (33)
40 3i00_A HIP-I, huntingtin-inter 29.7 71 0.0024 28.2 5.2 18 459-476 19-36 (120)
41 1ci6_A Transcription factor AT 29.0 88 0.003 24.3 5.1 29 463-491 31-59 (63)
42 1use_A VAsp, vasodilator-stimu 24.9 91 0.0031 23.2 4.1 22 471-492 9-31 (45)
43 2w6a_A ARF GTPase-activating p 24.6 57 0.0019 25.7 3.1 26 464-489 36-61 (63)
44 1nkp_B MAX protein, MYC proto- 23.9 1.1E+02 0.0036 24.7 4.9 33 463-495 48-80 (83)
45 3lay_A Zinc resistance-associa 23.6 1.4E+02 0.0046 28.0 6.2 78 386-495 66-143 (175)
46 2p22_A Suppressor protein STP2 21.9 1.4E+02 0.0048 28.0 5.9 79 405-497 5-84 (174)
47 2yy0_A C-MYC-binding protein; 21.3 1E+02 0.0034 23.4 3.9 29 457-485 21-49 (53)
48 3qh9_A Liprin-beta-2; coiled-c 21.1 1.2E+02 0.0042 25.1 4.7 25 461-485 18-42 (81)
49 2xv5_A Lamin-A/C; structural p 20.0 1.3E+02 0.0046 24.2 4.7 28 467-494 3-30 (74)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.49 E-value=1.2e-07 Score=94.17 Aligned_cols=199 Identities=11% Similarity=0.162 Sum_probs=130.6
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCC----CCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENF----PGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLIS 77 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~df----PGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ 77 (548)
++|.||+.++...-.......|.|.++ .-.+++|+.+.+|+|++++++++.||..|..||.+|+|.+ |..
T Consensus 56 a~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~ 129 (279)
T 3i3n_A 56 AATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKE 129 (279)
T ss_dssp HHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHH
T ss_pred HcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHH
Confidence 478999999875322224458899876 4578999999999999999999999999999999999985 999
Q ss_pred HHHHHhhhhhcCChHHHHHHHhhcccccchhhhhh---hHHHHHHHHHHHhccCCccccccccCCCceeccccccChhHH
Q 008937 78 KTEAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHF 154 (548)
Q Consensus 78 ktE~FL~~~vl~sW~dsi~vLksce~llp~aE~l~---iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f 154 (548)
.++.||.+.+-. .+|-.++.+|+..+ +...|.+-|+..... + +-.++...|+.+..
T Consensus 130 ~c~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l 188 (279)
T 3i3n_A 130 FCGEFLKKKLHL---------SNCVAIHSLAHMYTLSQLALKAADMIRRNFHK-------V-----IQDEEFYTLPFHLI 188 (279)
T ss_dssp HHHHHHHHHCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHH-------H-----TTSSGGGGSCHHHH
T ss_pred HHHHHHHHcCCc---------chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hcCcChhcCCHHHH
Confidence 999999875432 24545556666655 667787777653321 0 11256668888877
Q ss_pred HHHHHHHHhcC--CC-chhHHHHHHHHHHhhcCCCccccccccCCCCCCcchhHhhhccCCcccccchhhhHHHHHHHHh
Q 008937 155 MRIITTIKVKG--TK-PEIIGKCIMHYAKKWLPGMDVELEGLRGYGYGKHELQFSILNAGKEEVSVGQKEQRTIIENLVN 231 (548)
Q Consensus 155 ~rvi~am~~~g--~~-~~~i~~~l~~Ya~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~llE~iv~ 231 (548)
..++.. -. ++ .+.|-.+++.|++.-. ...+..+..+..
T Consensus 189 ~~lL~~---d~L~v~sE~~vf~av~~W~~~~~------------------------------------~~r~~~~~~ll~ 229 (279)
T 3i3n_A 189 RDWLSD---LEITVDSEEVLFETVLKWVQRNA------------------------------------EERERYFEELFK 229 (279)
T ss_dssp HHHHTC---SSCCCSCHHHHHHHHHHHHHTTH------------------------------------HHHTTTHHHHHT
T ss_pred HHHhcC---cCCCCCCHHHHHHHHHHHHHcCH------------------------------------HHHHHHHHHHHH
Confidence 766543 32 33 3445555554443110 011122223333
Q ss_pred hCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 008937 232 LLPHQDEGVSCKFFLQMLKMAMVYNASPALISELEKR 268 (548)
Q Consensus 232 LLP~ek~~vsc~fL~~LLR~A~~l~as~~cr~~LE~R 268 (548)
.+- =..+|..+|..+++..-.+..++.|+.-|..-
T Consensus 230 ~VR--f~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea 264 (279)
T 3i3n_A 230 LLR--LSQMKPTYLTRHVKPERLVANNEVCVKLVADA 264 (279)
T ss_dssp TSC--GGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHH
T ss_pred hcC--CCCCCHHHHHHHhhccchhcCCHHHHHHHHHH
Confidence 221 13478899999888888888899998876543
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.38 E-value=2.3e-07 Score=90.86 Aligned_cols=130 Identities=15% Similarity=0.214 Sum_probs=91.8
Q ss_pred ccccHHHHHhcCCCC--CCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHH
Q 008937 2 SKCGYIARLELQPSI--SNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (548)
Q Consensus 2 SkSg~l~kli~~~~~--~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 79 (548)
++|.||+.++..... ......|.|+|++ +++|+.+.+|+|+..+++++.||..+..||.+|+|.+ |....
T Consensus 52 a~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~------l~~~c 123 (256)
T 3hve_A 52 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 123 (256)
T ss_dssp TTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHH------HHHHH
T ss_pred HcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHH------HHHHH
Confidence 579999999875321 1144588998875 8999999999999999999999999999999999996 99999
Q ss_pred HHHhhhhhcCChHHHHHHHhhcccccchhhhhh---hHHHHHHHHHHHhccCCccccccccCCCceeccccccChhHHHH
Q 008937 80 EAFLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAWKASRENSTTEDIANRQGWWFDDVATLGIDHFMR 156 (548)
Q Consensus 80 E~FL~~~vl~sW~dsi~vLksce~llp~aE~l~---iv~RCidsla~ka~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~r 156 (548)
+.||.+.+-. .+|-.++.+|+..+ +...|.+-|+..... + +-.++...|+.+....
T Consensus 124 ~~~L~~~l~~---------~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~-------v-----~~~~~f~~L~~~~l~~ 182 (256)
T 3hve_A 124 CEFLEGCIAA---------ENCIGIRDFALHYCLHHVHYLATEYLETHFRD-------V-----SSTEEFLELSPQKLKE 182 (256)
T ss_dssp HHHHHHTCCS---------STTHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-------H-----TTCHHHHSSCHHHHHH
T ss_pred HHHHHhhCCH---------hhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-------H-----hCCcchhcCCHHHHHH
Confidence 9999876532 23444455566554 556777777654321 0 1125667888888887
Q ss_pred HHHH
Q 008937 157 IITT 160 (548)
Q Consensus 157 vi~a 160 (548)
++..
T Consensus 183 lL~~ 186 (256)
T 3hve_A 183 VISL 186 (256)
T ss_dssp HHHC
T ss_pred HHcc
Confidence 7754
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.24 E-value=1.2e-06 Score=74.62 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=63.3
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.||++++...-.... ..|.|+|++ +++|+...+|+|+.++.+++.||..|..+|++++|++ |...++.
T Consensus 33 ~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------L~~~c~~ 103 (109)
T 2vkp_A 33 VGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLEADTVLATLYAAKKYIVPA------LAKACVN 103 (109)
T ss_dssp HHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 489999999975432213 678888764 8999999999999999999999999999999999996 9999999
Q ss_pred Hhhhh
Q 008937 82 FLTLV 86 (548)
Q Consensus 82 FL~~~ 86 (548)
||.+.
T Consensus 104 ~l~~~ 108 (109)
T 2vkp_A 104 FLETS 108 (109)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99763
No 4
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.21 E-value=1.5e-06 Score=75.94 Aligned_cols=72 Identities=18% Similarity=0.278 Sum_probs=64.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.|++.++.. +...|.|+|++ +++|+.+.+|+|+.++++++.|+..|..||++++|.+ |....+.
T Consensus 49 a~S~yF~~~f~~-----~~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~ 115 (121)
T 1buo_A 49 CTSKMFEILFHR-----NSQHYTLDFLS--PKTFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEY------LEEQCLK 115 (121)
T ss_dssp HHCHHHHHHTTS-----CCSEEEECSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHH------HHHHHHH
T ss_pred hcCHHHHHHHcC-----CCcEEEeCCCC--HHHHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHH------HHHHHHH
Confidence 589999999874 23478898886 8999999999999999999999999999999999985 9999999
Q ss_pred Hhhhh
Q 008937 82 FLTLV 86 (548)
Q Consensus 82 FL~~~ 86 (548)
||.+.
T Consensus 116 ~l~~~ 120 (121)
T 1buo_A 116 MLETI 120 (121)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.16 E-value=1.8e-06 Score=74.91 Aligned_cols=75 Identities=12% Similarity=0.288 Sum_probs=62.4
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.||+.++...-.......|.|+|++ +++|+.+.+|+|+.++.+++.|+..|..||.+++|.+ |....+.
T Consensus 46 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~------L~~~C~~ 117 (120)
T 2if5_A 46 ACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVSTANVGDILSAARLLEIPA------VSHVCAD 117 (120)
T ss_dssp HHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 4799999999754322244578888765 8999999999999999999999999999999999996 8888998
Q ss_pred Hhh
Q 008937 82 FLT 84 (548)
Q Consensus 82 FL~ 84 (548)
||+
T Consensus 118 ~L~ 120 (120)
T 2if5_A 118 LLD 120 (120)
T ss_dssp HHC
T ss_pred HhC
Confidence 874
No 6
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.15 E-value=3e-06 Score=77.37 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=80.8
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.||++++...-.......|.|+|++ +++|+.+.+|+|+..+.+++.|+..|..+|++++|.+ |...++.
T Consensus 55 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 126 (172)
T 3htm_A 55 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 126 (172)
T ss_dssp HHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 5799999999864322244689998875 8999999999999999999999999999999999986 9999999
Q ss_pred HhhhhhcCChHHHHHHHhhcccccchhhhhh---hHHHHHHHHHH
Q 008937 82 FLTLVILSSWKETITVLKSCKNLSPWAENLQ---IVRRCCDSIAW 123 (548)
Q Consensus 82 FL~~~vl~sW~dsi~vLksce~llp~aE~l~---iv~RCidsla~ 123 (548)
||.+.+- -. +|-.++.+|+..+ +...|.+-|+.
T Consensus 127 ~l~~~l~--~~-------n~~~~~~~A~~~~~~~L~~~~~~~i~~ 162 (172)
T 3htm_A 127 ALCSNLS--VE-------NAAEILILADLHSADQLKTQAVDFINY 162 (172)
T ss_dssp HHHHTCC--TT-------THHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCC--HH-------HHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9987442 22 3333444555443 55677777664
No 7
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=98.15 E-value=1.5e-06 Score=75.88 Aligned_cols=73 Identities=21% Similarity=0.218 Sum_probs=62.8
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.|++.++.... ...|.|+|++ +++|+.+.+|+|+.++++++.||..|..||++++|.+ |....+.
T Consensus 45 a~S~yF~~~f~~~~----~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~------L~~~C~~ 112 (119)
T 3b84_A 45 CCSHFFQSLYGDGS----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAARELRVPE------AVELCQS 112 (119)
T ss_dssp HHCHHHHHHHTTTT----CCCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred hcCHHHHHHHCCCC----CCeEEeCCCC--HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 57999999997533 3478898887 8999999999999999999999999999999999986 8999999
Q ss_pred Hhhhh
Q 008937 82 FLTLV 86 (548)
Q Consensus 82 FL~~~ 86 (548)
||.+.
T Consensus 113 ~l~~~ 117 (119)
T 3b84_A 113 FKPKT 117 (119)
T ss_dssp CC---
T ss_pred HHHHc
Confidence 98763
No 8
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=98.09 E-value=3.7e-06 Score=72.66 Aligned_cols=72 Identities=18% Similarity=0.346 Sum_probs=61.0
Q ss_pred ccccHHHHHhcCCCCCCCccceEec--CCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLE--NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~--dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 79 (548)
++|.||+.++...+ ...|.|. |+ .+++|+.+.+|+|+.++++++.||..|..||++++|.+ |...+
T Consensus 43 a~S~yF~~~f~~~~----~~~i~l~~~~~--~~~~f~~ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~------L~~~C 110 (116)
T 2vpk_A 43 SFSEYFGAIYRSTS----ENNVFLDQSQV--KADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEE------VVTKC 110 (116)
T ss_dssp HHCHHHHHHHTTCC----CSCEECCTTTC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred hcCHHHHHHHcCCC----CCeEEeecCCC--CHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHH
Confidence 57999999998652 2356665 55 58999999999999999999999999999999999985 89999
Q ss_pred HHHhhh
Q 008937 80 EAFLTL 85 (548)
Q Consensus 80 E~FL~~ 85 (548)
+.||.+
T Consensus 111 ~~~l~~ 116 (116)
T 2vpk_A 111 KIKMED 116 (116)
T ss_dssp HHHHC-
T ss_pred HHHHhC
Confidence 999853
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.05 E-value=5.7e-06 Score=72.58 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=64.9
Q ss_pred ccccHHHHHhcCCCCCCCccceEe-cCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L-~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 80 (548)
++|.||+.++...... ....|.| .++ .+++|+.+.+|+|...+.+++.|+..|..||++++|.+ |....+
T Consensus 50 a~S~~F~~~f~~~~~e-~~~~i~l~~~~--~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~------L~~~c~ 120 (127)
T 1r29_A 50 ACSGLFYSIFTDQLKR-NLSVINLDPEI--NPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEH------VVDTCR 120 (127)
T ss_dssp HHCHHHHHHHTSTTTT-TCSEEECCTTS--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHH
T ss_pred HhCHHHHHHhcCCccC-CCCEEEeCCCC--CHHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 5799999999864332 4557888 666 48999999999999999999999999999999999986 899999
Q ss_pred HHhhh
Q 008937 81 AFLTL 85 (548)
Q Consensus 81 ~FL~~ 85 (548)
.||.+
T Consensus 121 ~~l~~ 125 (127)
T 1r29_A 121 KFIKA 125 (127)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99865
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.02 E-value=4.8e-06 Score=75.42 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=62.4
Q ss_pred ccccHHHHHhcCCCCC--CCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHH
Q 008937 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKT 79 (548)
Q Consensus 2 SkSg~l~kli~~~~~~--~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~kt 79 (548)
++|.||+.++...... .....|.|.|++ +++|+.+.+|+|..++.+++.||..|..||.+|+|.+ |...+
T Consensus 68 a~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C 139 (144)
T 2ppi_A 68 AASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTD------LKTLC 139 (144)
T ss_dssp HHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHH------HHHHH
T ss_pred HcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHH
Confidence 4799999999743211 144578898876 9999999999999999999999999999999999986 88888
Q ss_pred HHHh
Q 008937 80 EAFL 83 (548)
Q Consensus 80 E~FL 83 (548)
+.||
T Consensus 140 ~~~L 143 (144)
T 2ppi_A 140 CEFL 143 (144)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 8887
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.01 E-value=2.6e-06 Score=76.19 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=61.8
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.||+.++.... ...|.|.|++ +++|+.+.+|+|..++++++.||..|..||++|+|.+ |....+.
T Consensus 46 a~S~yF~~mf~~~~----~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~ 113 (135)
T 2yy9_A 46 CCSHFFQRIYGDGT----GGSVVLPAGF--AEIFGLLLDFFYTGHLALTSGNRDQVLLAAKELRVPE------AVELCQS 113 (135)
T ss_dssp HHCHHHHHTCC--------CCEEECGGG--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HhCHHHHHHHcCCC----CCeEEeCCCC--HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHH------HHHHHHH
Confidence 47899999987532 3478998887 8999999999999999999999999999999999986 8999999
Q ss_pred Hhhhhh
Q 008937 82 FLTLVI 87 (548)
Q Consensus 82 FL~~~v 87 (548)
||.+..
T Consensus 114 ~l~~~l 119 (135)
T 2yy9_A 114 FQPQTS 119 (135)
T ss_dssp CCC---
T ss_pred HHHHhc
Confidence 987754
No 12
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.00 E-value=1.6e-06 Score=76.95 Aligned_cols=94 Identities=11% Similarity=0.074 Sum_probs=62.7
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.||+.++...........|.|+|++ +++|+.+.+|+|+..+++++.|+..+..+|++++|.+ |...++.
T Consensus 46 ~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 117 (145)
T 4eoz_A 46 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 117 (145)
T ss_dssp HHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHC
T ss_pred HcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999999754321133578898875 8999999999999999999999999999999999986 8999999
Q ss_pred HhhhhhcCChHHHHHHHhhcccccchhhhhh
Q 008937 82 FLTLVILSSWKETITVLKSCKNLSPWAENLQ 112 (548)
Q Consensus 82 FL~~~vl~sW~dsi~vLksce~llp~aE~l~ 112 (548)
||.+.+- ..+|-.++.+|+..+
T Consensus 118 ~l~~~l~---------~~n~~~~l~~A~~~~ 139 (145)
T 4eoz_A 118 ALCSNLS---------VENAAEILILADLHS 139 (145)
T ss_dssp C------------------------------
T ss_pred HHHHhCC---------HHHHHHHHHHHHHhC
Confidence 9986441 235555666666654
No 13
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.98 E-value=1e-05 Score=72.37 Aligned_cols=76 Identities=16% Similarity=0.292 Sum_probs=64.9
Q ss_pred ccccHHHHHhcCCCCCCCccceEec-CCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 80 (548)
++|.||+.++..... +...|.|. +++ +++|+.+.+|+|+.++.+++.||..|..||++|+|.+ |....+
T Consensus 57 a~S~yF~~~f~~~~~--e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~ 126 (138)
T 2z8h_A 57 ACSSYFHSRIVGQTD--AELTVTLPEEVT--VKGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHN------IEESCF 126 (138)
T ss_dssp HHCHHHHHHHTTCCC--TTEEEECCTTSC--HHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGG------GHHHHH
T ss_pred HcCHHHHHHHhcCCC--CCceEEeCCCCC--HHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 589999999986432 23467774 554 8999999999999999999999999999999999996 999999
Q ss_pred HHhhhhh
Q 008937 81 AFLTLVI 87 (548)
Q Consensus 81 ~FL~~~v 87 (548)
.||.+.+
T Consensus 127 ~~l~~~l 133 (138)
T 2z8h_A 127 QFLKFKF 133 (138)
T ss_dssp HHTTCCC
T ss_pred HHHHHhc
Confidence 9998754
No 14
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.97 E-value=2.4e-06 Score=75.43 Aligned_cols=73 Identities=23% Similarity=0.405 Sum_probs=56.4
Q ss_pred ccccHHHHHhcCCCCCCCccceEec-CCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLE-NFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~-dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 80 (548)
++|.||+.++... ....|.|+ |++ +++|+.+.+|+|..++++++.||..|..||.+|+|.+ |...++
T Consensus 54 a~S~~F~~~f~~~----~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~------l~~~C~ 121 (129)
T 3ga1_A 54 ASSSYFRDLFNNS----RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQE------IMEKGT 121 (129)
T ss_dssp HHBHHHHHHHHHC----CCSEEECCTTCC--HHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTT------SSCC--
T ss_pred HcCHHHHHHHcCC----CCCEEEECCCCC--HHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHH------HHHHHH
Confidence 4799999999864 23478885 666 8999999999999999999999999999999999997 666688
Q ss_pred HHhhhh
Q 008937 81 AFLTLV 86 (548)
Q Consensus 81 ~FL~~~ 86 (548)
.||.++
T Consensus 122 ~~L~~~ 127 (129)
T 3ga1_A 122 EFFLKV 127 (129)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 888763
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.95 E-value=4.9e-06 Score=72.56 Aligned_cols=70 Identities=19% Similarity=0.362 Sum_probs=60.7
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.|++.++... ...|.|+++ .+++|+.+.+|+|+.++++++.||..|..||++|+|.+ |....+.
T Consensus 48 a~S~yF~~~f~~~-----~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~------L~~~C~~ 114 (119)
T 2q81_A 48 ACSEYFKMLFVDQ-----KDVVHLDIS--NAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQD------IITACHA 114 (119)
T ss_dssp HHCHHHHHHHHHC-----CSGGGGGGC--CHHHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCC--CHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHH------HHHHHHH
Confidence 5799999999752 235666665 48999999999999999999999999999999999996 8888999
Q ss_pred Hhh
Q 008937 82 FLT 84 (548)
Q Consensus 82 FL~ 84 (548)
||.
T Consensus 115 ~l~ 117 (119)
T 2q81_A 115 LKS 117 (119)
T ss_dssp HHT
T ss_pred HHh
Confidence 885
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.85 E-value=5.6e-06 Score=72.46 Aligned_cols=63 Identities=19% Similarity=0.292 Sum_probs=54.1
Q ss_pred ccccHHHHHhcCCCCCCCccceEecC-CCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcc
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLEN-FPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSE 68 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~d-fPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE 68 (548)
++|.||+.++..... +...|.|.| ++ +++|+.+.+|+|..++++++.||..|..||++|+|.+
T Consensus 53 a~S~yF~~~f~~~~~--e~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 53 ACSEYFWQALVGQTK--NDLVVSLPEEVT--ARGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHN 116 (125)
T ss_dssp HHBHHHHHHHTTCCC--SSCEEECCTTCC--HHHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSS
T ss_pred HcCHHHHHHhcCCCC--CCcEEEeCCCCC--HHHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHH
Confidence 479999999976442 244677766 54 8999999999999999999999999999999999986
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.65 E-value=1.5e-05 Score=69.90 Aligned_cols=72 Identities=18% Similarity=0.304 Sum_probs=57.7
Q ss_pred ccccHHHHHhcCCCCCCCccceEe-cCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKL-ENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTE 80 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L-~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE 80 (548)
++|.|++.++..... +...|.| .++ .+++|+.+.+|+|+.++++++.||..|..||++++|.+ |....+
T Consensus 50 a~S~yF~~mf~~~~~--e~~~i~l~~~v--~~~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~ 119 (124)
T 2ihc_A 50 ACSSYFHSRIVGQAD--GELNITLPEEV--TVKGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHN------IEESCF 119 (124)
T ss_dssp HHBHHHHHHHTTC-----CEEEECCTTS--CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGG
T ss_pred HcCHHHHHHHcCCCC--CCceEeecCCc--CHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHH
Confidence 589999999975432 2346777 355 48999999999999999999999999999999999996 555566
Q ss_pred HHh
Q 008937 81 AFL 83 (548)
Q Consensus 81 ~FL 83 (548)
.||
T Consensus 120 ~~l 122 (124)
T 2ihc_A 120 QFL 122 (124)
T ss_dssp GTC
T ss_pred HHH
Confidence 665
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.60 E-value=3.6e-05 Score=67.71 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=50.4
Q ss_pred cceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHHHhhh
Q 008937 21 YDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEAFLTL 85 (548)
Q Consensus 21 ~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~ 85 (548)
..|.|.|++ +++|+...+|+|.++++|+..||..|..||++|+|.+ |....+.++.+
T Consensus 61 ~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~------l~~~C~~~~~~ 117 (119)
T 3m5b_A 61 QWALGEGIS--PSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQS------LEEACWRARGD 117 (119)
T ss_dssp EEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHHHHHHHHHHTTCHH------HHHHHHHHC--
T ss_pred CEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhh
Confidence 468888876 8999999999999999999999999999999999986 88888888754
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.59 E-value=6e-05 Score=75.62 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=82.0
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCccccCCcchhHHhhhhhhhcCcccccCCchHHHHHH
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPIAFNPNNIAPLRCASEFLDMSEEYEDGNLISKTEA 81 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i~lt~~NVa~LrCAAeyLeMtE~~~~~NLi~ktE~ 81 (548)
++|.||+.++...-......+|.|.|++ +++|+...+|+|+..+.++..|+..|..||++++|.. |...+|.
T Consensus 195 a~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~ 266 (312)
T 3hqi_A 195 ARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALER------LKVMCED 266 (312)
T ss_dssp HHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHH------HHHHHHH
T ss_pred HcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCHHH------HHHHHHH
Confidence 5799999999754322245689999975 8999999999999999999999999999999999985 9999999
Q ss_pred HhhhhhcCChHHHHHHHhhcccccchhhhh---hhHHHHHHHHHHH
Q 008937 82 FLTLVILSSWKETITVLKSCKNLSPWAENL---QIVRRCCDSIAWK 124 (548)
Q Consensus 82 FL~~~vl~sW~dsi~vLksce~llp~aE~l---~iv~RCidsla~k 124 (548)
||.+.+-. .+|-.++.+|+.. .+...|++-|+..
T Consensus 267 ~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 267 ALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99764321 3444455566665 4677888888753
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.57 E-value=5.4e-05 Score=65.92 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=53.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCcc-ccCCcchhHHhhhhhhhcCcc
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLPI-AFNPNNIAPLRCASEFLDMSE 68 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~i-~lt~~NVa~LrCAAeyLeMtE 68 (548)
++|.|++.++... ...|.|+|++ +++|+.+.+|+|+.++ ++++.||..|..||++|+|..
T Consensus 52 a~S~~F~~~f~~~-----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 52 ASSTYFHQLFSVA-----GQVVELSFIR--AEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp HHCHHHHHHTTSC-----CSEEEECSSC--HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHH
T ss_pred HcCHHHHHHHcCC-----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccc
Confidence 5799999999753 3478898876 8999999999999999 799999999999999999974
No 21
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=95.99 E-value=0.0095 Score=50.51 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=47.6
Q ss_pred ccccHHHHHhcCCCCC--CCccceEecCCCCChHHHHHHHhhhc-----C---Cccc---cCCcchhHHhhhhhhhc
Q 008937 2 SKCGYIARLELQPSIS--NLGYDLKLENFPGGSETFEIILKFCY-----G---LPIA---FNPNNIAPLRCASEFLD 65 (548)
Q Consensus 2 SkSg~l~kli~~~~~~--~~~~~i~L~dfPGGaeaFEl~akFCY-----G---~~i~---lt~~NVa~LrCAAeyLe 65 (548)
..|++|+.++....+. .....|.|++++ +.+++++..||| . ..+. |++.|+--|-.||.||+
T Consensus 22 ~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 22 LTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 96 (97)
T ss_dssp TTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCCCGGGHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcCCHHHHHHHHHHHhhhC
Confidence 4699999999864321 124578888765 789999999999 3 4555 99999999999999997
No 22
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=95.70 E-value=0.0063 Score=56.07 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=62.3
Q ss_pred ccccHHHHHhcCCC-C-CCCccceEecCCCCChHHHHHHHhhhcCCc--------------------------cccCCcc
Q 008937 2 SKCGYIARLELQPS-I-SNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNN 53 (548)
Q Consensus 2 SkSg~l~kli~~~~-~-~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------------------i~lt~~N 53 (548)
+.|++|+.++.... . ......|.|++++ +.+++++..|||-.+ +.++..|
T Consensus 21 ~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~ 98 (159)
T 2ast_A 21 KQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGT 98 (159)
T ss_dssp HTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHH
T ss_pred HHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHH
Confidence 46999999997632 1 1133478888876 469999999999755 7899999
Q ss_pred hhHHhhhhhhhcCcccccCCchHHHHHHHhhhhhc
Q 008937 54 IAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVIL 88 (548)
Q Consensus 54 Va~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~vl 88 (548)
+--|--||.||+|.. |+.-+-.|+...+-
T Consensus 99 l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 99 LFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp HHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 999999999999985 89999999977654
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=92.19 E-value=0.069 Score=48.26 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=60.4
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCc--------------------------cccCCcchh
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------------------IAFNPNNIA 55 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------------------i~lt~~NVa 55 (548)
..|++|+.++.... ...|.|++++ +.+++.+..|||--. +.++..++-
T Consensus 22 ~~S~~ik~ml~~~~----~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~ 95 (141)
T 1fs1_B 22 KQSVTIKTMLEDLG----MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLF 95 (141)
T ss_dssp GTCHHHHHHHHHTC----CSSEECTTCC--HHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHH
T ss_pred HHhHHHHHHHHhcC----CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHH
Confidence 57999999997642 2368888876 579999999998532 678999999
Q ss_pred HHhhhhhhhcCcccccCCchHHHHHHHhhhhh
Q 008937 56 PLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (548)
Q Consensus 56 ~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~v 87 (548)
-|--||.||++.. |+.-+-.|+...+
T Consensus 96 eLi~AAnyL~I~~------Lldl~c~~vA~~i 121 (141)
T 1fs1_B 96 ELILAANYLDIKG------LLDVTCKTVANMI 121 (141)
T ss_dssp HHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhH------HHHHHHHHHHHHH
Confidence 9999999999985 8888888887654
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=91.75 E-value=0.054 Score=50.01 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=41.6
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCc---------------------------cccCCcch
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP---------------------------IAFNPNNI 54 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~---------------------------i~lt~~NV 54 (548)
..|++|+.++.... ....|.|++++| .+++.+..|||--. +.++..++
T Consensus 24 ~~S~~ik~ml~~~~---~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l 98 (160)
T 2p1m_A 24 LESQTIAHMVEDDC---VDNGVPLPNVTS--KILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATL 98 (160)
T ss_dssp HTCTTTC---------------CCTTSCH--HHHHHHHHC----------------------------------------
T ss_pred HHhHHHHHHHHccC---CCCceeCCcCcH--HHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHH
Confidence 46889999987542 223677888776 79999999999743 47889999
Q ss_pred hHHhhhhhhhcCcccccCCchHHHHHHHhhhhh
Q 008937 55 APLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (548)
Q Consensus 55 a~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~v 87 (548)
--|--||.||+|.. |+.-+-.|+...+
T Consensus 99 ~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 99 FELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp --CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 99999999999985 8988999987755
No 25
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=83.94 E-value=1.7 Score=33.42 Aligned_cols=34 Identities=24% Similarity=0.378 Sum_probs=30.5
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008937 461 SIEIKNLREELENVKTRMAELQKDYSELQREYEK 494 (548)
Q Consensus 461 ~rE~~~Lk~el~~mr~rv~eLEk~c~~mk~~~~k 494 (548)
.-|.++||.|++.+|.++.+|.+++..++.++.+
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4588999999999999999999999999988764
No 26
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=79.88 E-value=2.1 Score=39.82 Aligned_cols=78 Identities=8% Similarity=0.119 Sum_probs=53.5
Q ss_pred ccccHHHHHhcCCCCC----CCccceEecCCCCChHHHHHHHhhhcCCc-------------------------cccCCc
Q 008937 2 SKCGYIARLELQPSIS----NLGYDLKLENFPGGSETFEIILKFCYGLP-------------------------IAFNPN 52 (548)
Q Consensus 2 SkSg~l~kli~~~~~~----~~~~~i~L~dfPGGaeaFEl~akFCYG~~-------------------------i~lt~~ 52 (548)
..|+.|+.++...... .....|-|++++ +.+++.|..|||--+ +.+.+.
T Consensus 27 ~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~ 104 (169)
T 3v7d_A 27 ERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQE 104 (169)
T ss_dssp TTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHH
T ss_pred HHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHH
Confidence 4699999999865431 122578888877 589999999997421 346667
Q ss_pred chhHHhhhhhhhcCcccccCCchHHHHHHHhhhhh
Q 008937 53 NIAPLRCASEFLDMSEEYEDGNLISKTEAFLTLVI 87 (548)
Q Consensus 53 NVa~LrCAAeyLeMtE~~~~~NLi~ktE~FL~~~v 87 (548)
..--|-.||.||+|.. |+.-|=.++...+
T Consensus 105 ~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 105 MLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp HHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 7778889999999985 6666666654433
No 27
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=79.77 E-value=3.3 Score=31.31 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=30.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008937 462 IEIKNLREELENVKTRMAELQKDYSELQREYEKLSN 497 (548)
Q Consensus 462 rE~~~Lk~el~~mr~rv~eLEk~c~~mk~~~~k~~~ 497 (548)
+.+..||.--..+=++|.+||..|..+.||++++.+
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 345677888888899999999999999999998864
No 28
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=78.06 E-value=1.2 Score=37.47 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=45.6
Q ss_pred ccccHHHHHhcCCCC-C-CCccceEecCCCCChHHHHHHHhhhcCC-----------ccccCCcchhHHhhhhhhhcC
Q 008937 2 SKCGYIARLELQPSI-S-NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (548)
Q Consensus 2 SkSg~l~kli~~~~~-~-~~~~~i~L~dfPGGaeaFEl~akFCYG~-----------~i~lt~~NVa~LrCAAeyLeM 66 (548)
..|+.|+.++..... . .....|-|++++| .+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 21 ~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~--~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 21 LTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp TTSHHHHHHHHCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHccCCcccccCCceeCCCCCH--HHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 469999999986432 1 1234688887764 6999999999741 146788888889999999974
No 29
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=74.01 E-value=6.1 Score=30.12 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=33.4
Q ss_pred cchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008937 459 STSIEIKNLREELENVKTRMAELQKDYSELQREYEKLS 496 (548)
Q Consensus 459 ~~~rE~~~Lk~el~~mr~rv~eLEk~c~~mk~~~~k~~ 496 (548)
.++.||-.||.||+.=...++.||.|-+.||.-+..+.
T Consensus 14 ~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq 51 (54)
T 1deb_A 14 ALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQ 51 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHc
Confidence 45789999999999999999999999999998776554
No 30
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=70.32 E-value=2.3 Score=36.09 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=45.5
Q ss_pred ccccHHHHHhcCCCCCCCccceEecCCCCChHHHHHHHhhhcCCc--------------cccCCcchhHHhhhhhhhcC
Q 008937 2 SKCGYIARLELQPSISNLGYDLKLENFPGGSETFEIILKFCYGLP--------------IAFNPNNIAPLRCASEFLDM 66 (548)
Q Consensus 2 SkSg~l~kli~~~~~~~~~~~i~L~dfPGGaeaFEl~akFCYG~~--------------i~lt~~NVa~LrCAAeyLeM 66 (548)
..|+.|+.++...- ......|-|++++| .+++.+..|||--+ +.+.+..+--|--||.||++
T Consensus 24 ~~S~~ik~ml~~~~-e~~~~~Iplp~V~~--~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 24 MISPTLKAMIEGPF-RESKGRIELKQFDS--HILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp TTCHHHHHHHHSST-TTCTTEEEETTSCH--HHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHhHHHHHHHhccc-ccCCCceecCCcCH--HHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 46999999998622 11234788888775 69999999998421 35667777778889999874
No 31
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=67.75 E-value=7.8 Score=30.05 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=27.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 008937 464 IKNLREELENVKTRMAELQKDYSELQREYEKLSN 497 (548)
Q Consensus 464 ~~~Lk~el~~mr~rv~eLEk~c~~mk~~~~k~~~ 497 (548)
...||.-=..+=.+|.+||-.|..|.||++++.+
T Consensus 13 ~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 13 LLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555566778999999999999999999875
No 32
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=63.48 E-value=7.7 Score=33.09 Aligned_cols=26 Identities=15% Similarity=0.395 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008937 469 EELENVKTRMAELQKDYSELQREYEK 494 (548)
Q Consensus 469 ~el~~mr~rv~eLEk~c~~mk~~~~k 494 (548)
.||+.||..|.|||..+..||+.++.
T Consensus 50 ~Emq~Ir~tvyeLE~~h~kmKq~YEe 75 (92)
T 3vp9_A 50 AEMQQIRNTVYERELTHRKMKDAYEE 75 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999987753
No 33
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=59.92 E-value=3.4 Score=35.90 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=44.3
Q ss_pred ccccHHHHHhcCCCC-C-CCccceEecCCCCChHHHHHHHhhhcCC-----------ccccCCcchhHHhhhhhhhcC
Q 008937 2 SKCGYIARLELQPSI-S-NLGYDLKLENFPGGSETFEIILKFCYGL-----------PIAFNPNNIAPLRCASEFLDM 66 (548)
Q Consensus 2 SkSg~l~kli~~~~~-~-~~~~~i~L~dfPGGaeaFEl~akFCYG~-----------~i~lt~~NVa~LrCAAeyLeM 66 (548)
..|+.|+.++..... . .....|-|++++| .+++.+..|||-- .+.+.+..+--|--||.||++
T Consensus 37 ~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s--~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 37 LTSGTIKAMLSGPGQFAENETNEVNFREIPS--HVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HTSHHHHHHSSCC--------CEEECSSCCH--HHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHhcCCcccccCCceeCCCCCH--HHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 368999999986432 1 1234688887775 6999999999631 145777788888899999975
No 34
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=51.27 E-value=9.5 Score=33.21 Aligned_cols=33 Identities=6% Similarity=-0.023 Sum_probs=25.4
Q ss_pred HhcCCCCCChhHHHHHHHhcCCccccccchhHHHHHHHHhhCCC
Q 008937 344 EVARDPNLSITKFQVLAESLPENARTCHDGLYRAIDTYLKSHPS 387 (548)
Q Consensus 344 EiA~D~nL~~skF~~LAealPd~AR~~~DgLYRAIDiYLKaHp~ 387 (548)
|...|.+.+|.++.+.+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 45667788888886655 6889999999999983
No 35
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=38.89 E-value=30 Score=28.39 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=27.1
Q ss_pred cchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008937 459 STSIEIKNLREELENVKTRMAELQKDYSELQRE 491 (548)
Q Consensus 459 ~~~rE~~~Lk~el~~mr~rv~eLEk~c~~mk~~ 491 (548)
..++|.+.||..+..+-.|+.+||.|+.-+|+-
T Consensus 12 AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~ 44 (78)
T 1dip_A 12 AVREEVEILKEQIRELVEKNSQLERENTLLKTL 44 (78)
T ss_dssp TCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346678889999999999999999999888754
No 36
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=33.24 E-value=14 Score=24.51 Aligned_cols=17 Identities=35% Similarity=0.423 Sum_probs=14.3
Q ss_pred cchhHHhhhhhhhcCcc
Q 008937 52 NNIAPLRCASEFLDMSE 68 (548)
Q Consensus 52 ~NVa~LrCAAeyLeMtE 68 (548)
.||..|-=||||||=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 48999999999998544
No 37
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=31.56 E-value=27 Score=28.95 Aligned_cols=42 Identities=10% Similarity=0.191 Sum_probs=33.2
Q ss_pred cccchhHHHHHHHHHHhhhhhhhhhhcchhhHHHHhHHHHHhhHh
Q 008937 301 TMHNIDVVQRIMDYFLMHEQQQQQKQQNMGKTNVSKILDNYLAEV 345 (548)
Q Consensus 301 tlyDVd~V~Riv~~Fl~~~~~~~~~~~~~~~~kVakLvD~YLaEi 345 (548)
..++.+++.||+..+...+... -+..++.-||+++|-|..|.
T Consensus 7 ~~~~~~lI~ril~~~f~~~ktr---I~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 7 GGFRKETVERLLRLHFRDGRTR---VNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp CCCCHHHHHHHHHHHCCSTTCE---ECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhccCccc---ccHHHHHHHHHHHHHHHHHH
Confidence 5689999999999876644321 24568899999999999995
No 38
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=31.54 E-value=70 Score=27.02 Aligned_cols=36 Identities=22% Similarity=0.330 Sum_probs=25.5
Q ss_pred chHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008937 460 TSIEIKNLREELENVKTRMAELQKDYSELQREYEKL 495 (548)
Q Consensus 460 ~~rE~~~Lk~el~~mr~rv~eLEk~c~~mk~~~~k~ 495 (548)
+..|+..|..+++.|+....++.++-..||+.++.+
T Consensus 53 LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 53 LENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345666777777777777777777777777776655
No 39
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=30.77 E-value=1.1e+02 Score=20.68 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=13.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008937 463 EIKNLREELENVKTRMAELQKDYSELQR 490 (548)
Q Consensus 463 E~~~Lk~el~~mr~rv~eLEk~c~~mk~ 490 (548)
|+..||.|+..++..+.-|.-|.-.++|
T Consensus 3 eiaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445555555555444444444444443
No 40
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=29.73 E-value=71 Score=28.22 Aligned_cols=18 Identities=44% Similarity=0.545 Sum_probs=12.0
Q ss_pred cchHHHhHHHHHHHHHHH
Q 008937 459 STSIEIKNLREELENVKT 476 (548)
Q Consensus 459 ~~~rE~~~Lk~el~~mr~ 476 (548)
.+.+|++.||.|+++++.
T Consensus 19 ~Lkreie~lk~ele~l~~ 36 (120)
T 3i00_A 19 RLYREISGLKAQLENMKT 36 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456777777777665543
No 41
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=28.97 E-value=88 Score=24.33 Aligned_cols=29 Identities=31% Similarity=0.362 Sum_probs=13.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008937 463 EIKNLREELENVKTRMAELQKDYSELQRE 491 (548)
Q Consensus 463 E~~~Lk~el~~mr~rv~eLEk~c~~mk~~ 491 (548)
+.+.|+.+-..++.++..|++|...+++-
T Consensus 31 ~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 31 ECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444555555555555444443
No 42
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.94 E-value=91 Score=23.19 Aligned_cols=22 Identities=27% Similarity=0.555 Sum_probs=10.8
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHH
Q 008937 471 LENVKTR-MAELQKDYSELQREY 492 (548)
Q Consensus 471 l~~mr~r-v~eLEk~c~~mk~~~ 492 (548)
|+++|.. +.|+-+|...||++|
T Consensus 9 le~~KqEIL~E~RkElqK~K~EI 31 (45)
T 1use_A 9 LQRVKQELLEEVKKELQKVKEEI 31 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433 345555555555554
No 43
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=24.58 E-value=57 Score=25.66 Aligned_cols=26 Identities=23% Similarity=0.419 Sum_probs=18.2
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008937 464 IKNLREELENVKTRMAELQKDYSELQ 489 (548)
Q Consensus 464 ~~~Lk~el~~mr~rv~eLEk~c~~mk 489 (548)
|..|-.||..|+..+..|+.|-..++
T Consensus 36 N~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 36 NSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 55666677777777777777766654
No 44
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=23.85 E-value=1.1e+02 Score=24.73 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=24.5
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008937 463 EIKNLREELENVKTRMAELQKDYSELQREYEKL 495 (548)
Q Consensus 463 E~~~Lk~el~~mr~rv~eLEk~c~~mk~~~~k~ 495 (548)
=+..|+.+.+.|+..+.+|.++...+++++..+
T Consensus 48 YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 48 YIQYMRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 366777777777777778887777777777655
No 45
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=23.56 E-value=1.4e+02 Score=27.99 Aligned_cols=78 Identities=13% Similarity=0.226 Sum_probs=44.1
Q ss_pred CCCCHHHhhhhhcccccCCCCHHHhHHHhhCCCCCchHHHHHHHHHhhhhhhccccCCCCccCCCCCCCCCCCcchHHHh
Q 008937 386 PSLSEHDRRRLCKLMNCEKLSLDACTHAAQNDRLPLRTVVQVLFSEQVKMRTAMQETEPALQCDNSEQGDTQPSTSIEIK 465 (548)
Q Consensus 386 p~lse~Er~~lCr~mdcqKLS~EAc~HAaQNeRLPlr~vVQvLf~eQl~lr~~~~~~~~~~~~~~~~~~~~~~~~~rE~~ 465 (548)
-+||++.+.++ .+-....+.+.-|+|- -+...+.+|+..+....++ ...++
T Consensus 66 LnLT~EQq~ql-----------~~I~~e~r~~~~~Lr~---ql~akr~EL~aL~~a~~~D---------------eakI~ 116 (175)
T 3lay_A 66 SPLTTEQQATA-----------QKIYDDYYTQTSALRQ---QLISKRYEYNALLTASSPD---------------TAKIN 116 (175)
T ss_dssp --CCHHHHHHH-----------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTSSSCC---------------HHHHH
T ss_pred ccCCHHHHHHH-----------HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhCCCCC---------------HHHHH
Confidence 37999999998 3444455555556553 3444445555555432221 23456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008937 466 NLREELENVKTRMAELQKDYSELQREYEKL 495 (548)
Q Consensus 466 ~Lk~el~~mr~rv~eLEk~c~~mk~~~~k~ 495 (548)
+|-.|+..+|. +|+.+-..++.+|.|-
T Consensus 117 aL~~Ei~~Lr~---qL~~~R~k~~~em~Ke 143 (175)
T 3lay_A 117 AVAKEMESLGQ---KLDEQRVKRDVAMAQA 143 (175)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 66666666665 3444556677777664
No 46
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=21.87 E-value=1.4e+02 Score=28.01 Aligned_cols=79 Identities=18% Similarity=0.220 Sum_probs=48.4
Q ss_pred CCHHHhHHHhhCCCCCchHHHHHHHHHhh-hhhhccccCCCCccCCCCCCCCCCCcchHHHhHHHHHHHHHHHHHHHHHH
Q 008937 405 LSLDACTHAAQNDRLPLRTVVQVLFSEQV-KMRTAMQETEPALQCDNSEQGDTQPSTSIEIKNLREELENVKTRMAELQK 483 (548)
Q Consensus 405 LS~EAc~HAaQNeRLPlr~vVQvLf~eQl-~lr~~~~~~~~~~~~~~~~~~~~~~~~~rE~~~Lk~el~~mr~rv~eLEk 483 (548)
+|+..-.|.-|| |+.+++.|+-+=. +....+...... -..++++-.+.|+.+.++|+.-+.+||+
T Consensus 5 ~~~~~~~~~l~~----Lq~~i~~l~~~~~~~~~e~l~~~q~~----------lq~sl~~~~~~l~~g~~~L~~~~~~Le~ 70 (174)
T 2p22_A 5 ISPTNHHEMLQN----LQTVVNELYREDVDYVADKILTRQTV----------MQESIARFHEIIAIDKNHLRAVEQAIEQ 70 (174)
T ss_dssp --CHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTGGGGTT----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 677788889999 9999999875322 222222211100 0113355567777777778777778888
Q ss_pred HHHHHHHHHhhhcc
Q 008937 484 DYSELQREYEKLSN 497 (548)
Q Consensus 484 ~c~~mk~~~~k~~~ 497 (548)
++..++.+++.+..
T Consensus 71 ~~~~L~~~i~~l~~ 84 (174)
T 2p22_A 71 TMHSLNAQIDVLTA 84 (174)
T ss_dssp HHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777766653
No 47
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=21.35 E-value=1e+02 Score=23.43 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=22.6
Q ss_pred CCcchHHHhHHHHHHHHHHHHHHHHHHHH
Q 008937 457 QPSTSIEIKNLREELENVKTRMAELQKDY 485 (548)
Q Consensus 457 ~~~~~rE~~~Lk~el~~mr~rv~eLEk~c 485 (548)
...+++||.+||..++.++.++.||....
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888888888888887653
No 48
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=21.14 E-value=1.2e+02 Score=25.09 Aligned_cols=25 Identities=24% Similarity=0.437 Sum_probs=20.8
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHH
Q 008937 461 SIEIKNLREELENVKTRMAELQKDY 485 (548)
Q Consensus 461 ~rE~~~Lk~el~~mr~rv~eLEk~c 485 (548)
.+..+.|-.||..+|.||.|||.|-
T Consensus 18 ~~~~E~L~qEi~~Lr~kv~elEnEr 42 (81)
T 3qh9_A 18 QRKAEELLQELRHLKIKVEELENER 42 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556788999999999999999763
No 49
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=20.05 E-value=1.3e+02 Score=24.25 Aligned_cols=28 Identities=14% Similarity=0.323 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008937 467 LREELENVKTRMAELQKDYSELQREYEK 494 (548)
Q Consensus 467 Lk~el~~mr~rv~eLEk~c~~mk~~~~k 494 (548)
|..|.+..+..+.+||.+...++++|+.
T Consensus 3 l~~e~~~~~~~i~~lE~eL~~~r~e~~~ 30 (74)
T 2xv5_A 3 SARERDTSRRLLAEKEREMAEMRARMQQ 30 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666777777777776666666654
Done!