BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008939
(548 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1DMI8|CREC_NEOFI Probable catabolite repression protein creC OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=creC PE=3 SV=1
Length = 603
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 210/412 (50%), Gaps = 59/412 (14%)
Query: 141 KGTYIIFNVGDAIFISDLNS-QDKDPIKSIHFSNSNPVCHAFDQDAKDGH--DLLIGLNS 197
+G + N+ A DL+S Q ++P+ I F+ ++ +CH ++ K D+++G ++
Sbjct: 174 EGLFAFANINRAFQWLDLSSKQKEEPLAKILFTKAHMLCHDINEVTKSPSHIDMVMGSSA 233
Query: 198 GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYV 257
GD+ + + +K NK+G V+NS T + W+PG + F+ HA+G L V
Sbjct: 234 GDII------WYEPISQKYA---RINKNGVVSNSPVTHIKWIPGSENLFMASHANGQLVV 284
Query: 258 YEKSKDGAGDSSF-PVIKDQTQFSV-------------AHPRYSKSNPIARWHICQGSIN 303
Y+K K+ D+ F P I+DQ+ ++ + R K+NP+A W + I+
Sbjct: 285 YDKEKE---DALFTPEIQDQSAEALKASSRQPLQVLKSVNSRNQKTNPVALWKLANQRIS 341
Query: 304 SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD 363
AFS D +LA V DG LRV DY KE+++ +SYYG L+C WS DGKYI+TGG+DD
Sbjct: 342 HFAFSPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVCWSPDGKYIVTGGQDD 401
Query: 364 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLW 423
L+ +WS +RK+VA +GHNSWVS VAFD + + YRFGSVG D RLLLW
Sbjct: 402 LLTIWSFPERKIVARCQGHNSWVSAVAFDPW--------QCDERTYRFGSVGDDCRLLLW 453
Query: 424 DLEMDEIVVP----------------------LRRGPLGGSPTFSTGSQSAHWDNVCPVG 461
D + + P R G+ S ++A+ C
Sbjct: 454 DFSVGMLHRPKVHQASARQRTSMVAGSSQYGNRHRADSAGNRMRSDSQRTANTYESCDQA 513
Query: 462 TLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRP 513
P L P+++ V T+P+ L F ++ ++T EGHI+ W RP
Sbjct: 514 VRHPVEPRARTALLPPIMSKVVGTDPICWLGFQEDCIMTSSLEGHIRTWDRP 565
>sp|A2QVV2|CREC_ASPNC Probable catabolite repression protein creC OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=creC PE=3 SV=1
Length = 591
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 223/467 (47%), Gaps = 61/467 (13%)
Query: 90 AAKLLGTGNGSRTL-----GFGGGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTY 144
AA L G GN + G + I SS S + + + + + G +
Sbjct: 112 AASLFGDGNPALAAPPVKEGLKRRKPKNNIIKSSSSFVSRVITHETATKRLNDRNPDGLF 171
Query: 145 IIFNVGDAIFISDLNS-QDKDPIKSIHFSNSNPVCHAFDQDAKDGH--DLLIGLNSGDV- 200
N+ A DL++ Q ++P+ I F+ ++ + H ++ K D+++G ++GD+
Sbjct: 172 AFANINRAFQWLDLSAKQKEEPVTKILFTKAHMISHDINELTKSTSHIDVVMGSSAGDII 231
Query: 201 YSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEK 260
+ + Q+ + NK+G VNNS T + W+PG + F+ HA+G L VY+K
Sbjct: 232 WYEPMSQKYARI----------NKNGVVNNSPVTHIKWIPGSENLFMAAHANGQLVVYDK 281
Query: 261 SKDGA------GDSSFPVIKDQT------QFSVAHPRYSKSNPIARWHICQGSINSIAFS 308
K+ A G S +K + + R K+NP+A W + I AFS
Sbjct: 282 EKEDALFAPELGSPSAETMKSSSGRSPLQILKSVNSRNQKTNPVALWKLANQKITQFAFS 341
Query: 309 TDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVW 368
D +LA V DG LRV DY KE+++ +SYYG L+C WS DGKYI+TGG+DDLV +W
Sbjct: 342 PDRRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVCWSPDGKYIVTGGQDDLVTIW 401
Query: 369 SMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMD 428
S+ +RK+VA +GHNSWVS VAFD + + YRFGSVG D RLLLWD +
Sbjct: 402 SLPERKIVARCQGHNSWVSAVAFDPW--------RCDDRTYRFGSVGDDCRLLLWDFSVG 453
Query: 429 EIVVP----------------------LRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPA 466
+ P R GG+ T S ++A N P
Sbjct: 454 MLHRPRVHQANARQRTSMIVSNTQHLNRHRADSGGNRTRSDSQETADTYNSYDPTVRHPV 513
Query: 467 PSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRP 513
L P+++ V +P+ L F ++S++T EGHI+ W RP
Sbjct: 514 EPRARTALLPPIMSKIVGEDPICWLGFQEDSIMTSSLEGHIRTWDRP 560
>sp|A1CTE6|CREC_ASPCL Probable catabolite repression protein creC OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=creC PE=3 SV=2
Length = 573
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 211/413 (51%), Gaps = 61/413 (14%)
Query: 141 KGTYIIFNVGDAIFISDLNS-QDKDPIKSIHFSNSNPVCHAFDQDAKDGH--DLLIGLNS 197
+G + N+ A DL+S Q ++P+ I F+ ++ +CH ++ K D+++G ++
Sbjct: 144 EGLFAFANINRAFQWLDLSSKQKEEPLTKILFTKAHMLCHDTNELTKSSSHIDIVMGSSA 203
Query: 198 GDV-YSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLY 256
GD+ + + Q+ + NK+G V+NS T + W+PG + F+ HA+G L
Sbjct: 204 GDIIWYEPMSQKYARI----------NKNGVVSNSPVTHIKWIPGSENLFMAAHANGQLA 253
Query: 257 VYEKSKDGAGDSSF-PVIKDQTQFSV-------------AHPRYSKSNPIARWHICQGSI 302
VY+K K+ D+ F P I++Q+ ++ + R K+NP+A W + I
Sbjct: 254 VYDKEKE---DALFTPEIQNQSAEALKASGRQPLQVLKSVNSRNQKTNPVALWKLANQRI 310
Query: 303 NSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGED 362
+ AFS D +LA V DG LRV DY KE+++ +SYYG L+C WS DGKYI+TGG+D
Sbjct: 311 SHFAFSPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVCWSPDGKYIVTGGQD 370
Query: 363 DLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLL 422
DL+ +WS+ +RK+VA +GHNSWVS VAFD + + YRFGSVG D RLLL
Sbjct: 371 DLLTIWSLPERKIVARCQGHNSWVSAVAFDPW--------RCDERTYRFGSVGDDCRLLL 422
Query: 423 WDLEMDEIVVP----------------------LRRGPLGGSPTFSTGSQSAHWDNVCPV 460
WD + + P R + S ++A+ C
Sbjct: 423 WDFSVGMLHRPKVYQASARQRTSMITSNTQYGNRHRADSASNRMRSDSQKTANTYESCDQ 482
Query: 461 GTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRP 513
P L P+++ V ++P+ L F ++ ++T EGHI+ W RP
Sbjct: 483 AVRHPVEPRARTALLPPIMSKVVGSDPICWLGFQEDCIMTSSLEGHIRTWDRP 535
>sp|Q2UM42|CREC_ASPOR Probable catabolite repression protein creC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=creC PE=3 SV=1
Length = 572
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 223/443 (50%), Gaps = 58/443 (13%)
Query: 128 SSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-PIKSIHFSNSNPVCHAFDQDAK 186
+SS + + N DG + N+ A DL+S++K+ P+ I F+ ++ + H ++ K
Sbjct: 134 ASSKRLNDRNPDG--LFAFANINRAFQWLDLSSKNKEEPLAKILFTKAHMLTHDINELTK 191
Query: 187 DGH--DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDG 244
D+ +G ++GD+ + + +K NK+G V+NS T + W+PG +
Sbjct: 192 SSSHIDIAMGSSAGDII------WYEPISQKYA---RINKNGVVSNSPVTHIKWIPGSEN 242
Query: 245 AFVVGHADGNLYVYEKSKDGA------GDSSFPVIKDQTQFSV-----AHPRYSKSNPIA 293
F+ HA+G L VY+K K+ A + S +K ++ + + R K+NP+A
Sbjct: 243 MFMAAHANGQLVVYDKEKEDALFTPEISNHSAEAMKASSRLPLQVLKSVNSRNQKTNPVA 302
Query: 294 RWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDG 353
W + I+ AFS D +LA V DG LRV DY KE+++ +SYYG L+C WS DG
Sbjct: 303 LWKLANQKISQFAFSPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVCWSPDG 362
Query: 354 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 413
KYI+TGG+DDLV +WS +RK+VA +GHNSWVS VAFD + + YRFGS
Sbjct: 363 KYIVTGGQDDLVTIWSFPERKIVARCQGHNSWVSTVAFDPW--------RCDERTYRFGS 414
Query: 414 VGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWD------------------ 455
VG D RLLLWD + + P T S + H++
Sbjct: 415 VGDDCRLLLWDFSVGMLHRPRAHQASARQRTSMIASNTQHFNRHRADSASNRMRSDSQRT 474
Query: 456 ----NVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWM 511
N P L P+++ V +P+ L F ++S++T EGHI+ W
Sbjct: 475 ADTYNDYDSAVRHPVEPRARTALLPPIMSKIVGDDPICWLGFQEDSIMTSSLEGHIRTWD 534
Query: 512 RP--GVAESQS-SSSETVLSTSS 531
RP G+ +S + ++S +STS+
Sbjct: 535 RPREGINDSYNGNTSSPAISTSA 557
>sp|B8N4F5|CREC_ASPFN Probable catabolite repression protein creC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=creC PE=3 SV=1
Length = 572
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 223/443 (50%), Gaps = 58/443 (13%)
Query: 128 SSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-PIKSIHFSNSNPVCHAFDQDAK 186
+SS + + N DG + N+ A DL+S++K+ P+ I F+ ++ + H ++ K
Sbjct: 134 ASSKRLNDRNPDG--LFAFANINRAFQWLDLSSKNKEEPLAKILFTKAHMLTHDINELTK 191
Query: 187 DGH--DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDG 244
D+ +G ++GD+ + + +K NK+G V+NS T + W+PG +
Sbjct: 192 SSSHIDIAMGSSAGDII------WYEPISQKYA---RINKNGVVSNSPVTHIKWIPGSEN 242
Query: 245 AFVVGHADGNLYVYEKSKDGA------GDSSFPVIKDQTQFSV-----AHPRYSKSNPIA 293
F+ HA+G L VY+K K+ A + S +K ++ + + R K+NP+A
Sbjct: 243 MFMAAHANGQLVVYDKEKEDALFTPEISNHSAEAMKASSRLPLQVLKSVNSRNQKTNPVA 302
Query: 294 RWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDG 353
W + I+ AFS D +LA V DG LRV DY KE+++ +SYYG L+C WS DG
Sbjct: 303 LWKLANQKISQFAFSPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVCWSPDG 362
Query: 354 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 413
KYI+TGG+DDLV +WS +RK+VA +GHNSWVS VAFD + + YRFGS
Sbjct: 363 KYIVTGGQDDLVTIWSFPERKIVARCQGHNSWVSTVAFDPW--------RCDERTYRFGS 414
Query: 414 VGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWD------------------ 455
VG D RLLLWD + + P T S + H++
Sbjct: 415 VGDDCRLLLWDFSVGMLHRPRAHQASARQRTSMIASNTQHFNRHRADSASNRMRSDSQRT 474
Query: 456 ----NVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWM 511
N P L P+++ V +P+ L F ++S++T EGHI+ W
Sbjct: 475 ADTYNDYDSAVRHPVEPRARTALLPPIMSKIVGDDPICWLGFQEDSIMTSSLEGHIRTWD 534
Query: 512 RP--GVAESQS-SSSETVLSTSS 531
RP G+ +S + ++S +STS+
Sbjct: 535 RPREGINDSYNGNTSSPAISTSA 557
>sp|Q4WN25|CREC_ASPFU Probable catabolite repression protein creC OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=creC PE=3 SV=2
Length = 566
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 206/412 (50%), Gaps = 66/412 (16%)
Query: 141 KGTYIIFNVGDAIFISDLNS-QDKDPIKSIHFSNSNPVCHAFDQDAKDGH--DLLIGLNS 197
+G + N+ A DL+S Q +DP+ I F+ ++ +CH ++ K D+++G ++
Sbjct: 144 EGLFAFANINRAFQWLDLSSKQKEDPLAKILFTKAHMLCHDINEVTKSPSHIDVVMGSSA 203
Query: 198 GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYV 257
GD+ + + +K NK+G V NS T + W+PG + F+ HA+G L V
Sbjct: 204 GDII------WYEPISQKYA---RINKNGVVCNSPVTHIKWIPGSENLFMASHANGQLVV 254
Query: 258 YEKSKDGAGDSSF-PVIKDQTQFSV-------------AHPRYSKSNPIARWHICQGSIN 303
Y+K K+ D+ F P I+DQ+ +V + R K+NP+A W + I+
Sbjct: 255 YDKEKE---DALFTPEIQDQSAEAVKASSTQPLQVLKSVNSRNQKTNPVALWKLANQRIS 311
Query: 304 SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD 363
AFS D +LA V DG LRV DY KE YYG L+C WS DGKYI+TGG+DD
Sbjct: 312 HFAFSPDQRHLAVVLEDGSLRVMDYLKE-------DYYGGLICVCWSPDGKYIVTGGQDD 364
Query: 364 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLW 423
LV +WS +RK+VA +GHNSWVS VAFD + + YRFGSVG D RLLLW
Sbjct: 365 LVTIWSFPERKIVARCQGHNSWVSAVAFDPW--------QCDERTYRFGSVGDDCRLLLW 416
Query: 424 DLEMDEIVVP--------LRRGPLGGSPTF--------------STGSQSAHWDNVCPVG 461
D + + P R + GS + S ++A+ C
Sbjct: 417 DFSVGMLHRPKVHQTSARQRTSMVAGSSQYGNRHRADSVGNRMRSDSQRTANTYESCDQA 476
Query: 462 TLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRP 513
P L P+++ V T+P+ L F ++ ++T EGHI+ W RP
Sbjct: 477 VRHPVEPRARTALLPPIMSKVVGTDPICWLGFQEDCIMTSSLEGHIRTWDRP 528
>sp|B0Y7H6|CREC_ASPFC Probable catabolite repression protein creC OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=creC PE=3
SV=2
Length = 566
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 206/412 (50%), Gaps = 66/412 (16%)
Query: 141 KGTYIIFNVGDAIFISDLNS-QDKDPIKSIHFSNSNPVCHAFDQDAKDGH--DLLIGLNS 197
+G + N+ A DL+S Q +DP+ I F+ ++ +CH ++ K D+++G ++
Sbjct: 144 EGLFAFANINRAFQWLDLSSKQKEDPLAKILFTKAHMLCHDINEVTKSPSHIDVVMGSSA 203
Query: 198 GDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYV 257
GD+ + + +K NK+G V NS T + W+PG + F+ HA+G L V
Sbjct: 204 GDII------WYEPISQKYA---RINKNGVVCNSPVTHIKWIPGSENLFMASHANGQLVV 254
Query: 258 YEKSKDGAGDSSF-PVIKDQTQFSV-------------AHPRYSKSNPIARWHICQGSIN 303
Y+K K+ D+ F P I+DQ+ +V + R K+NP+A W + I+
Sbjct: 255 YDKEKE---DALFTPEIQDQSAEAVKASSTQPLQVLKSVNSRNQKTNPVALWKLANQRIS 311
Query: 304 SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD 363
AFS D +LA V DG LRV DY KE YYG L+C WS DGKYI+TGG+DD
Sbjct: 312 HFAFSPDQRHLAVVLEDGSLRVMDYLKE-------DYYGGLICVCWSPDGKYIVTGGQDD 364
Query: 364 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLW 423
LV +WS +RK+VA +GHNSWVS VAFD + + YRFGSVG D RLLLW
Sbjct: 365 LVTIWSFPERKIVARCQGHNSWVSAVAFDPW--------QCDERTYRFGSVGDDCRLLLW 416
Query: 424 DLEMDEIVVP--------LRRGPLGGSPTF--------------STGSQSAHWDNVCPVG 461
D + + P R + GS + S ++A+ C
Sbjct: 417 DFSVGMLHRPKVHQTSARQRTSMVAGSSQYGNRHRADSVGNRMRSDSQRTANTYESCDQA 476
Query: 462 TLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRP 513
P L P+++ V T+P+ L F ++ ++T EGHI+ W RP
Sbjct: 477 VRHPVEPRARTALLPPIMSKVVGTDPICWLGFQEDCIMTSSLEGHIRTWDRP 528
>sp|Q0CKB1|CREC_ASPTN Probable catabolite repression protein creC OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=creC PE=3 SV=1
Length = 588
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 211/428 (49%), Gaps = 48/428 (11%)
Query: 116 SGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNS-QDKDPIKSIHFSNS 174
S SS + + +ST N + + +G + N+ A DL S Q ++P+ I F+ +
Sbjct: 144 SSSSFVSRVITHEASTKRLN-DRNPEGLFAFANINRAFQWLDLGSKQKEEPLAKILFTKA 202
Query: 175 NPVCHAFDQDAKDGH--DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSR 232
+ + H ++ K D+++G ++GD+ + + +K NK+G V NS
Sbjct: 203 HMLSHDINELTKSASHIDVVMGSSAGDII------WYEPISQKYA---RINKNGVVCNSP 253
Query: 233 CTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQ-----FSVAHPRYS 287
T + WVPG + F+ HA+G L VY+K K+ A + +K Q + R
Sbjct: 254 VTHIKWVPGSENLFMAAHANGQLVVYDKEKEDALFTPEEPVKSSGQQPLQVLKSVNSRNQ 313
Query: 288 KSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCC 347
K+NP+A W + I AFS D +LA V DG LRV DY +E+++ +SYYG L+C
Sbjct: 314 KTNPVALWKLANQKITQFAFSPDQRHLAVVLEDGSLRVMDYLEEEVLDIFRSYYGGLICV 373
Query: 348 AWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETV 407
WS DGKYI+TGG+DDLV +WS +RK+VA +GHNSWVS VAFD + +
Sbjct: 374 CWSPDGKYIVTGGQDDLVTIWSFPERKIVARCQGHNSWVSTVAFDPW--------RCDER 425
Query: 408 MYRFGSVGQDTRLLLWDLEMDEIVVP----------------------LRRGPLGGSPTF 445
YRFGSVG D RLLLWD + + P R G+
Sbjct: 426 TYRFGSVGDDCRLLLWDFSVGMLHRPRAHQASTRQRTSMITSNSQHASRHRADSAGNRAR 485
Query: 446 STGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREG 505
S ++A + P L P+++ + ++P+ L F ++S++T EG
Sbjct: 486 SDSQRTADGYDEYDQAVRHPVEPRARTALLPPIMSKEIGSDPICWLGFQEDSIMTSSLEG 545
Query: 506 HIKIWMRP 513
HI+ W RP
Sbjct: 546 HIRTWDRP 553
>sp|Q9P4R5|CREC_EMENI Catabolite repression protein creC OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=creC PE=1 SV=2
Length = 592
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 216/437 (49%), Gaps = 59/437 (13%)
Query: 116 SGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQDKD-PIKSIHFSNS 174
S SS + + ++T N + D +G + N+ A DL+S+ KD P+ I F+ +
Sbjct: 143 SSSSFVSRVIIHEATTKRLN-DRDPEGLFAFANINRAFQWLDLSSKHKDEPLSKILFTKA 201
Query: 175 NPVCHAFDQDAKDGH--DLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSR 232
+ + H ++ K D+++G ++GD++ + + +K NK+G +N+S
Sbjct: 202 HMISHDVNEITKSSAHIDVIMGSSAGDIF------WYEPISQKYA---RINKNGIINSSP 252
Query: 233 CTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYS----- 287
T + W+PG + F+ H +G L VY+K K+ A P + +Q+ SV R+S
Sbjct: 253 VTHIKWIPGSENFFIAAHENGQLVVYDKEKEDA--LFIPELPEQSAESVKPSRWSLQVLK 310
Query: 288 -------KSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSY 340
K+NP+A W + I AFS D +LA V DG LR+ DY +E+++ +SY
Sbjct: 311 SVNSKNQKANPVAVWRLANQKITQFAFSPDHRHLAVVLEDGTLRLMDYLQEEVLDVFRSY 370
Query: 341 YGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNS 400
YG C WS DGKYI+TGG+DDLV +WS+ +RK++A +GH+SWVS VAFD +
Sbjct: 371 YGGFTCVCWSPDGKYIVTGGQDDLVTIWSLPERKIIARCQGHDSWVSAVAFDPW------ 424
Query: 401 DGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVP-----------------------LRRG 437
+ YR GSVG D LLLWD + + P R
Sbjct: 425 --RCDERTYRIGSVGDDCNLLLWDFSVGMLHRPKVHHQTSARHRTSLIAPSSQQPNRHRA 482
Query: 438 PLGGSPTFSTGSQSAHWDNVCPVGTLQ-PAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQE 496
G+ S ++A P +Q P S L P+++ V +P+ L F ++
Sbjct: 483 DSSGNRMRSDSQRTAADSESAPDQPVQHPVESRARTALLPPIMSKAVGEDPICWLGFQED 542
Query: 497 SVLTVCREGHIKIWMRP 513
+++T EGHI+ W RP
Sbjct: 543 TIMTSSLEGHIRTWDRP 559
>sp|Q8TBZ3|WDR20_HUMAN WD repeat-containing protein 20 OS=Homo sapiens GN=WDR20 PE=1 SV=2
Length = 569
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 183/361 (50%), Gaps = 58/361 (16%)
Query: 121 IGSLGASSSSTSMTNTNFD-GKGTYIIFNVGDAIFISDLNSQDK-----DPIKSIHFSNS 174
S G++ S N N G G + FNVG ++ K PI + +
Sbjct: 40 FNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGT 99
Query: 175 NPVCHAFDQ--DAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSR 232
P CH F+ + LL+G ++G V QL D KK + +N++ ++ SR
Sbjct: 100 QPTCHDFNHLTATAESVSLLVGFSAGQV-------QLIDPIKKET-SKLFNEERLIDKSR 151
Query: 233 CTSVTWVPGGDGAFVVGHADGNLYVYE-KSKDGAGDSSFPVIKDQTQFSVAHPRYSKS-- 289
T V WVPG + F+V H+ GN+Y+Y + G + ++K F+V H SKS
Sbjct: 152 VTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAV-HTCKSKSTR 210
Query: 290 NPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAW 349
NP+ +W + +G++N AFS DG +LA V +DG+LRVF++ +L KSY+G LLC W
Sbjct: 211 NPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCW 270
Query: 350 SMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSY--------------- 394
S DGKYI+TGGEDDLV VWS D +V+A G GH SWVS VAFD Y
Sbjct: 271 SPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGS 330
Query: 395 ---------------------WSQPNS-DGTAETVMYRFGSVGQDTRLLLWDLEMDEIVV 432
S+ NS D +V YRFGSVGQDT+L LWDL D I+
Sbjct: 331 DEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTED-ILF 389
Query: 433 P 433
P
Sbjct: 390 P 390
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 466 APSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPG 514
P M DVP L PL+ ++ E L+ LIF ++ ++T C+EG I W RPG
Sbjct: 514 CPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPG 562
>sp|Q9D5R2|WDR20_MOUSE WD repeat-containing protein 20 OS=Mus musculus GN=Wdr20 PE=1 SV=1
Length = 567
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 180/359 (50%), Gaps = 56/359 (15%)
Query: 121 IGSLGASSSSTSMTNTNFD-GKGTYIIFNVGDAIFISDLNSQDK-----DPIKSIHFSNS 174
S G++ S N N G G + F+VG +++ K PI + +
Sbjct: 40 FNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGT 99
Query: 175 NPVCHAFDQ--DAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSR 232
P CH F+ + LL+G ++G V QL D KK + +N++ ++ SR
Sbjct: 100 QPTCHDFNHLTATAESVSLLVGFSAGQV-------QLIDPIKKET-SKLFNEERLIDKSR 151
Query: 233 CTSVTWVPGGDGAFVVGHADGNLYVYE-KSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNP 291
T V WVPG D F+V H+ GN+Y Y + G + ++K F+V H SKS
Sbjct: 152 VTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAV-HNCKSKSTR 210
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
+W + +G++N AFS DG +LA V +DG+LRVF++ +L KSY+G LLC WS
Sbjct: 211 DLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSP 270
Query: 352 DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWS--------------- 396
DGKYI+TGGEDDLV VWS D +V+A G GH SWVS VAFD Y +
Sbjct: 271 DGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDK 330
Query: 397 ----------------------QPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVP 433
Q ++D +V YRFGSVGQDT+L LWDL D I+ P
Sbjct: 331 NFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTED-ILFP 388
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 466 APSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPG 514
P M DVP L PL+ ++ E L+ L+F ++ ++T C+EG I W RPG
Sbjct: 512 CPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPG 560
>sp|Q08274|DMWD_MOUSE Dystrophia myotonica WD repeat-containing protein OS=Mus musculus
GN=Dmwd PE=2 SV=3
Length = 665
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 170/341 (49%), Gaps = 58/341 (17%)
Query: 134 TNTNFDGKGTYIIFNVGDAIFIS------------DLNSQDKDPIKSIHFSNSNPVCHAF 181
T + G + FN+G ++ DLN PI + + P CH F
Sbjct: 112 TPSGLGAGGDRVCFNLGRELYFYPGCCRSGSQRSIDLNK----PIDKRIYKGTQPTCHDF 167
Query: 182 DQ--DAKDGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWV 239
+Q A + LL+G ++G V Q D+ KK + +N++ ++ ++ T + W+
Sbjct: 168 NQFTAATETISLLVGFSAGQV-------QYLDLIKKDT-SKLFNEERLIDKTKVTYLKWL 219
Query: 240 PGGDGAFVVGHADGNLYVYEKSKDGAG-DSSFPVIKDQTQFSV-AHPRYSKSNPIARWHI 297
P + F+ HA G+LY+Y S + ++K F+V A + NP+A+W +
Sbjct: 220 PESESLFLASHASGHLYLYNVSHPCTSTPPQYSLLKQGEGFAVYAAKSKAPRNPLAKWAV 279
Query: 298 CQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYIL 357
+G +N AFS DG +LA V +DG LRVF + L KSY+G LLC WS DG+Y++
Sbjct: 280 GEGPLNEFAFSPDGRHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVV 339
Query: 358 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQ------PNSDG--------- 402
TGGEDDLV VWS + +VVA G GH SWV+ VAFD Y ++ ++DG
Sbjct: 340 TGGEDDLVTVWSFTEGRVVARGHGHKSWVNAVAFDPYTTRAEEAASASADGDPSGEEEEP 399
Query: 403 ---------------TAETVMYRFGSVGQDTRLLLWDLEMD 428
A ++ YRFGS GQDT+ LWDL D
Sbjct: 400 EVTSSDTGAPVSPLPKAGSITYRFGSAGQDTQFCLWDLTED 440
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 466 APSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVA 516
P + +VP L PLV ++ E L+ L+F ++ ++T C+EG I W RPG A
Sbjct: 575 CPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARPGKA 625
>sp|Q09019|DMWD_HUMAN Dystrophia myotonica WD repeat-containing protein OS=Homo sapiens
GN=DMWD PE=2 SV=3
Length = 674
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 167/340 (49%), Gaps = 63/340 (18%)
Query: 142 GTYIIFNVGDAIFIS------------DLNSQDKDPIKSIHFSNSNPVCHAFDQ--DAKD 187
G + FN+G ++ DLN PI + + P CH F+Q A +
Sbjct: 123 GDRVCFNLGRELYFYPGCCRRGSQRSIDLNK----PIDKRIYKGTQPTCHDFNQFTAATE 178
Query: 188 GHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSVTWVPGGDGAFV 247
LL+G ++G V Q D+ KK + +N++ ++ ++ T + W+P + F+
Sbjct: 179 TISLLVGFSAGQV-------QYLDLIKKDT-SKLFNEERLIDKTKVTYLKWLPESESLFL 230
Query: 248 VGHADGNLYVYEKSKDGA-GDSSFPVIKDQTQFSV-AHPRYSKSNPIARWHICQGSINSI 305
HA G+LY+Y S A + ++K FSV A + NP+A+W + +G +N
Sbjct: 231 ASHASGHLYLYNVSHPCASAPPQYSLLKQGEGFSVYAAKSKAPRNPLAKWAVGEGPLNEF 290
Query: 306 AFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLV 365
AFS DG +LA V +DG LRVF + L KSY+G LLC WS DG+Y++TGGEDDLV
Sbjct: 291 AFSPDGRHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLV 350
Query: 366 QVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGT---------------------- 403
VWS + +VVA G GH SWV+ VAFD Y ++ T
Sbjct: 351 TVWSFTEGRVVARGHGHKSWVNAVAFDPYTTRAEEAATAAGADGERSGEEEEEEPEAAGT 410
Query: 404 -------------AETVMYRFGSVGQDTRLLLWDLEMDEI 430
A ++ YRFGS GQDT+ LWDL D +
Sbjct: 411 GSAGGAPLSPLPKAGSITYRFGSAGQDTQFCLWDLTEDVL 450
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 466 APSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTVCREGHIKIWMRPGVA 516
P + +VP L PLV ++ E L+ L+F ++ ++T C+EG I W RPG A
Sbjct: 584 CPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARPGKA 634
>sp|Q10437|BUN62_SCHPO UBP9-binding protein bun62 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=bun62 PE=1 SV=1
Length = 543
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 201/440 (45%), Gaps = 54/440 (12%)
Query: 107 GGNGGSKSISGSSRIGSLGASSSSTSMTNTNFDGKGTYIIFNVGDAIFISDLNSQD-KDP 165
G+ I+ S I SL + + GK T++ N + + D+++ +
Sbjct: 125 ASRAGAPLINAKSFISSLTFHDNIVRSFQPSIHGK-TFVFANHEKSFYWLDVSAANSHSA 183
Query: 166 IKSIHFSNSNPVCHAFDQDAK--DGHDLLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYN 223
+ + F ++PVCH + K G D++IG ++GDV + K + +N
Sbjct: 184 LLKMEFPRASPVCHDINSFTKSPKGLDVIIGFDTGDVL------WYDPINFKYL---RFN 234
Query: 224 KDGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQF---- 279
K+G +N+S T++ WV G D F+V +G L +Y+K + + ++ +
Sbjct: 235 KNGQLNSSSVTAIKWVAGKDSQFLVSFRNGWLVLYDKYR---HEQPLHIVVPEKNLKSLY 291
Query: 280 -----------SVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDY 328
S+ H K NP+A + + IN FS D YLA V G L++FD+
Sbjct: 292 LSSPGTFNILISINHRDDRKLNPVACYAFSKSPINGFCFSPDYQYLALVSERGTLKLFDF 351
Query: 329 SKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSG 388
KE ++ SY+ L C WS DGK+I GG+DDLV ++S RK+VA +GH SWV+
Sbjct: 352 VKEHVLDVFHSYFAGLTCVTWSPDGKFIAIGGKDDLVSIYSFPLRKLVARCQGHKSWVTD 411
Query: 389 VAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVP------LRRGPLGGS 442
V FD++ ++ YR SVG D +LLLWD + I P +
Sbjct: 412 VIFDAWRCDDDN--------YRIASVGLDRKLLLWDFSVSAIHRPKSAVYYVNHHSNNSK 463
Query: 443 PTFS---------TGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIF 493
P S GS+ + + V T+ P S +P +SP+ + V PLS + F
Sbjct: 464 PAISDFDDVGDLTMGSEIDNSNYVNGDITIHPTLSRSLIPVISPITIYDVDDSPLSSVFF 523
Query: 494 TQESVLTVCREGHIKIWMRP 513
+ ++T G I+ W RP
Sbjct: 524 DPDCMITCATNGRIRTWQRP 543
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+G++ + +S DG +A+ G+D +R++ + + K++ GA+ ++S DG Y+L+
Sbjct: 89 KGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLS 148
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 418
+D +++W ++D+K + GH +WV G M S D
Sbjct: 149 SSDDKTLKLWRLQDKKFMCSFAGHKNWVRS-------------GVISPDMRLVASGSDDK 195
Query: 419 RLLLWDLEMDEIV 431
++LWDL +IV
Sbjct: 196 TVMLWDLNFQKIV 208
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G+I S++FS DG YL + D L+++ ++ +C + + S D + + +G
Sbjct: 132 GAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASG 191
Query: 360 GEDDLVQVWSMEDRKVVA 377
+D V +W + +K+V+
Sbjct: 192 SDDKTVMLWDLNFQKIVS 209
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
I ++ +NSI+ G +LA+ G D ++++D + + I S + ++
Sbjct: 265 IQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQ 324
Query: 352 DGKYILTGGEDDLVQVW 368
G Y TGG +L VW
Sbjct: 325 SGDYFATGGSQNLCMVW 341
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 275 DQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLI 334
D Q + P+ S + PI + H Q +N +FS DG +AT D +R++D + +
Sbjct: 366 DDLQLILWDPQKS-TKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFL 424
Query: 335 CGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGV 389
+ + A+ CAWS D + +++ +D ++VW + +K+ GH V V
Sbjct: 425 ATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAV 479
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
++ A+STD L + +D L+V+D +++ + + WS DG+ + +G
Sbjct: 432 AAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASG 491
Query: 360 GEDDLVQVWS 369
G D V++WS
Sbjct: 492 GADKAVRIWS 501
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 300 GSINSIAFS-TDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
G+I S FS + + L T D R++D + I K + + C AW+ D I T
Sbjct: 135 GTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIAT 194
Query: 359 GGEDDLVQVW 368
G D+ ++ W
Sbjct: 195 GSMDNTIRFW 204
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ SI+S+ F G YLA+ D ++++D ++ + K + A+ C A+S DGK++ +
Sbjct: 105 KASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLAS 164
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 418
+D V++W + K++ H S V+ V F PN Y S D
Sbjct: 165 ASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF-----HPNE--------YLLASGSADR 211
Query: 419 RLLLWDLE 426
+ LWDLE
Sbjct: 212 TVKLWDLE 219
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%)
Query: 301 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG 360
++ +AFS DG +LA+ D ++++D ++I S+ A+ + + + +G
Sbjct: 149 AVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGS 208
Query: 361 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
D V++W +E ++ EG V V F+
Sbjct: 209 ADRTVKLWDLEKFNMIGSSEGETGVVRSVLFN 240
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 311 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSM 370
G LAT G D + ++ SK I + A+ C ++ + ++ G +++W +
Sbjct: 33 GRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL 92
Query: 371 EDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 426
E K++ GH + +S + F P + A GSV D+ + LWD+
Sbjct: 93 EAAKILRTLMGHKASISSLDF-----HPMGEYLAS------GSV--DSNIKLWDVR 135
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ ++N++ FS DG LA+ D ++++D + QL+ + ++ +S DG+ I
Sbjct: 1155 EQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAA 1214
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
G ED V++W +D K++ GH WV+ ++F
Sbjct: 1215 GSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSF 1247
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 301 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG 360
+N + FS DG LA+ RD +++++ S + K + + ++S DGK I +
Sbjct: 1448 EVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASAS 1507
Query: 361 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
D +++W ++ HN V V F+
Sbjct: 1508 ADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFN 1539
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
Q +NS++FS DG LA+ D ++++ + +L+ K + ++ +S DGK I +
Sbjct: 1239 QDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIAS 1298
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D+ +++W+ ++ + GH+ V V F
Sbjct: 1299 ASRDNTIKLWNRHGIELETF-TGHSGGVYAVNF 1330
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 37/70 (52%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S+ F+ DG+ LA+ D ++++ L+ + + ++S DG+YI + E
Sbjct: 1533 VYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASE 1592
Query: 362 DDLVQVWSME 371
D V++W ++
Sbjct: 1593 DKTVKIWQID 1602
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKE-QLICGGKSYYGALLCCAWSMDGKYILTGG 360
+ SI+ S DG +A+ D +++ +S++ +L + A+ ++S DG+ I +GG
Sbjct: 1075 VISISISRDGQTIASGSLDKTIKL--WSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGG 1132
Query: 361 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 420
D +++W D ++ GH V+ V F + DG S D +
Sbjct: 1133 SDKTIKLWQTSDGTLLKTITGHEQTVNNVYF-------SPDGK------NLASASSDHSI 1179
Query: 421 LLWDLEMDEIVVPL 434
LWD ++++ L
Sbjct: 1180 KLWDTTSGQLLMTL 1193
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 287 SKSNPIARWHICQGSINS-----------IAFSTDGTYLATVGRDGYLRVFDYSKEQLIC 335
S+ N + W++ G ++FS DG +A+ D +R++D LI
Sbjct: 1465 SRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIK 1524
Query: 336 GGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
++ + ++ DG + + D V++W D ++ GH++ V +F
Sbjct: 1525 SLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSF 1580
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S +FS DG Y+A+ D ++++ L+ + ++ +S DGK +++G
Sbjct: 1575 VYSSSFSPDGRYIASASEDKTVKIWQIDG-HLLTTLPQHQAGVMSAIFSPDGKTLISGSL 1633
Query: 362 DDLVQVWSMEDRK 374
D ++W + ++
Sbjct: 1634 DTTTKIWRFDSQQ 1646
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ FS D TYLA+ DG + +++ +L G +L+ CA+S DG ++TG
Sbjct: 100 VRVCCFSPDSTYLASGAADGSVVLWNAHSYKLYRCGSVKDSSLVACAFSPDGGLLVTGSS 159
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 421
+ VW +DR E + G+ S+ SQP S G +YR S GQD +
Sbjct: 160 GGDLTVW--DDRMRCLHSEKAHDL--GITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIK 215
Query: 422 LWDLEMDEIV-VPLR-RGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV 479
LW + ++ L+ R L G +H + G++ + + D+ S L
Sbjct: 216 LWVVSFTRVLGFELKYRSTLSGHCAPVLACAFSHDGQMLASGSVDKSVIIYDIGTQSVLH 275
Query: 480 AHRVHTEPLSGLIFTQESVL 499
HT ++ F ++L
Sbjct: 276 TLTQHTRYVTTCAFAPNTLL 295
>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3
Length = 515
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 255 LYVYEK--SKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGT 312
L YEK K+G + D + +P S + PIAR Q +N +AFS DG
Sbjct: 357 LENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKS-TKPIARMTGHQKLVNHVAFSPDGR 415
Query: 313 YLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMED 372
Y+ + D ++++D + I + + ++ AWS D + +++ +D ++VW +
Sbjct: 416 YIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRT 475
Query: 373 RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLW 423
RK+ GH V V WS DG R S G+D + LW
Sbjct: 476 RKLSVDLPGHKDEVYTVD----WS---VDGK------RVCSGGKDKMVRLW 513
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
S+ +A+S+D L + +D L+V+D +L + + WS+DGK + +G
Sbjct: 445 ASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSG 504
Query: 360 GEDDLVQVWS 369
G+D +V++W+
Sbjct: 505 GKDKMVRLWT 514
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 314 LATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDR 373
+ T D R++D + + K +Y +LC +WS DG+ I TG D+ +++W +
Sbjct: 159 MVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSG 218
Query: 374 KVVAWG-EGHNSWVSGVAFDS-YWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 424
+ + GH+ W++ ++++ + +P S R S +D + +WD
Sbjct: 219 QCLGDALRGHSKWITSLSWEPIHLVKPGSKP-------RLASSSKDGTIKIWD 264
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 301 SINSIAFSTDGTYLATVGRDGYLRV---FDYSKEQLICGGKSYYGALLCCAWSMDGKYIL 357
SI+S+ FS DG +LA+ D +++ +D E+ + G K + AWS D K I
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI---AWSQDSKLIC 104
Query: 358 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD 417
+ +D +++W +E K+V +GH +V GV+F+ P S+ + GS ++
Sbjct: 105 SASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFN-----PQSN------LIVSGSFDEN 153
Query: 418 TRLLLWDLEMDE 429
R +WD+ E
Sbjct: 154 VR--IWDVNTGE 163
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 20/175 (11%)
Query: 338 KSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQ 397
K + ++ +S DGK++ + D +++W D K EGH +S +A WSQ
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIA----WSQ 98
Query: 398 PNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNV 457
+ S D + +WD+E ++V L+ G + G N+
Sbjct: 99 DSK---------LICSASDDKTIKIWDVESGKMVKTLK-----GHKEYVFGVSFNPQSNL 144
Query: 458 CPVGTLQPAPSMRDVPKLSPLVAHRVHTEPLSGLIFTQESVLTV--CREGHIKIW 510
G+ + DV H++P++G+ F ++ L V +G ++IW
Sbjct: 145 IVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM----DGKYIL 357
++ + FS +G ++ D LR++ Y+ + + + C +S GK+I+
Sbjct: 218 VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIV 277
Query: 358 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 390
TG ED+L+ +++++ R++V GH V VA
Sbjct: 278 TGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVA 310
Score = 32.3 bits (72), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I+ IA+S D + + D ++++D +++ K + + +++ I++G
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGT 403
D+ V++W + + H+ V+GV F N DGT
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTGVHF-------NRDGT 185
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G++ S++FS DG L T D ++V+ +++ + + + C +S DG+ I++
Sbjct: 103 GTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSA 162
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
+D +++W R+ + H +V+ V F + GT + D
Sbjct: 163 SDDKTIKLWDKTSRECIQSFCEHGGFVNFVDF-------HPSGTC------IAAAATDNT 209
Query: 420 LLLWDLEMDEIV 431
+ +WD+ M++++
Sbjct: 210 VKVWDIRMNKLI 221
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
I + + G +NS++F G YL T D L+V D + +L+ + G + C +S
Sbjct: 221 IQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKFSR 280
Query: 352 DGKYILTGGEDDLVQVW 368
+G + +GG D+ V VW
Sbjct: 281 EGDFFASGGSDEQVMVW 297
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ +I S+ FS G +A+ RD +R++ S + K++ G + ++S DG+ ++T
Sbjct: 60 KDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSVSFSGDGQSLVT 119
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
+D ++VW++ +K + H +WV F
Sbjct: 120 ASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKF 152
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G +N + F GT +A D ++V+D +LI + + G + ++ G Y++T
Sbjct: 187 GFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITA 246
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
D ++V + + +++ GH V+ V F + +G F S G D +
Sbjct: 247 SNDSTLKVLDLLEGRLLYTLHGHQGPVTCVKF-------SREGDF------FASGGSDEQ 293
Query: 420 LLLWDLEMD 428
+++W D
Sbjct: 294 VMVWKTNFD 302
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G++ S++FS DG L T D ++V+ +++ + + + C +S DG+ I++
Sbjct: 103 GTVRSVSFSGDGQSLVTASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSA 162
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
+D +++W R+ + H +V+ V F + GT + D
Sbjct: 163 SDDKTIKLWDKTSRECIHSFCEHGGFVNFVDF-------HPSGTC------IAAAATDNT 209
Query: 420 LLLWDLEMDEIV 431
+ +WD+ M++++
Sbjct: 210 VKVWDIRMNKLI 221
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
I + + G +NS++F G YL T D L+V D + +L+ + G + +S
Sbjct: 221 IQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKFSR 280
Query: 352 DGKYILTGGEDDLVQVW 368
+G++ +GG D+ V VW
Sbjct: 281 EGEFFASGGSDEQVMVW 297
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 49/93 (52%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ +I S+ FS G +A+ RD +R++ S + K++ G + ++S DG+ ++T
Sbjct: 60 KDAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTVFKAHTGTVRSVSFSGDGQSLVT 119
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
+D ++VW++ +K + H +WV F
Sbjct: 120 ASDDKTIKVWTVHRQKFLFSLNQHINWVRCAKF 152
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G +N + F GT +A D ++V+D +LI + + G + ++ G Y++T
Sbjct: 187 GFVNFVDFHPSGTCIAAAATDNTVKVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITA 246
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
D ++V + + +++ GH V+ V F + +G F S G D +
Sbjct: 247 SNDSTLKVLDLLEGRLLYTLHGHQGPVTSVKF-------SREGEF------FASGGSDEQ 293
Query: 420 LLLWDLEMD 428
+++W D
Sbjct: 294 VMVWKTNFD 302
>sp|Q9EPV5|APAF_RAT Apoptotic protease-activating factor 1 OS=Rattus norvegicus
GN=Apaf1 PE=2 SV=1
Length = 1249
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 306 AFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLV 365
FS DG +A+ G D L+VF + + K++ +LCCA+S D YI T D V
Sbjct: 622 CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKV 681
Query: 366 QVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 425
++W K+V E H+ V+ F T ++ + D+ L LWDL
Sbjct: 682 KIWDSGTGKLVHTYEEHSEQVNCCHF-----------TNKSNHLLLATGSNDSFLKLWDL 730
Query: 426 EMDE 429
E
Sbjct: 731 NQKE 734
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 292 IARWHIC-QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS 350
I R C QG++ S A S+D T ++ D +++ + + K + + C A+S
Sbjct: 1077 IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFS 1136
Query: 351 MDGKYILTGGEDDLVQVWSMEDRKV------VAWGEG---HNSWVSGVAF 391
+DG + TG ++ +++W++ D ++ ++ EG H WV+ V F
Sbjct: 1137 LDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCF 1186
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYIL- 357
+ + AFS+D +Y+AT D ++++D +L+ + + + CC ++ ++L
Sbjct: 657 EDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLL 716
Query: 358 -TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF---DSYWSQPNSDGT 403
TG D +++W + ++ GH + V+ F D + ++DGT
Sbjct: 717 ATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGT 766
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 55/147 (37%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDY--SKEQLICGGKSYYGA-----------LLC 346
S+ FS D LA+ DG L+++D + E+ K ++ + + C
Sbjct: 744 NSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKC 803
Query: 347 CAWSMDGKYILTGGEDDL------------------------------------------ 364
C+WS DG I+ ++ +
Sbjct: 804 CSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYC 863
Query: 365 VQVWSMEDRKVVAWGEGHNSWVSGVAF 391
V++W+++ R VA GH SWV GV F
Sbjct: 864 VELWNIDSRVKVADCRGHLSWVHGVMF 890
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/121 (19%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ ++ S Y+A +G +++ + ++ G + A+ ++ DGK +++
Sbjct: 961 EAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLIS 1020
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF--DSYWSQPNSDGTAETVMYRFGSVGQ 416
ED ++QVW+ + + V + + H V DS + DGT + G + +
Sbjct: 1021 SSEDSVIQVWNWQTEEYV-FLQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIER 1079
Query: 417 D 417
D
Sbjct: 1080 D 1080
>sp|Q6GMD2|WDR61_XENLA WD repeat-containing protein 61 OS=Xenopus laevis GN=wdr61 PE=2
SV=1
Length = 305
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I SIA+S DG YLA+ DG + +FD + +L+ + + + +S D + ++T +
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASD 210
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D ++++ ++ + A GH SWV VAF
Sbjct: 211 DGYIKIYDVQHASLAATLSGHGSWVLNVAF 240
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 285 RYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVF--DYSKEQLICGGKSYYG 342
R + P+ W S+AFS D +LAT G + +F + K++ + +
Sbjct: 100 RSIDAGPVDAW--------SVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF- 150
Query: 343 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGH 382
+L A+S DGKY+ +G D ++ ++ + K++ EGH
Sbjct: 151 -ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I S+ FSTD L T DGY++++D L + +L A+S D + ++
Sbjct: 193 IRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSS 252
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 421
D V+VW + R V H V GV + N +G+ + SVG D +
Sbjct: 253 DKSVKVWDVSARTCVHTFLDHQDQVWGVKY-------NRNGS------KIVSVGDDQEIH 299
Query: 422 LWD 424
++D
Sbjct: 300 VYD 302
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 343 ALLCCAW---SMDG-KYILTGGEDDLVQVWSMEDRKV-VAWG-EGHNSWVSGVAFDSYWS 396
A+ W S DG + +++G DDLV+VW D ++ + W EGH V V
Sbjct: 18 AIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDV----- 72
Query: 397 QPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPLGG-SPTFSTGSQ 450
P+ + A + + D + LWDLE + + + GP+ S FS SQ
Sbjct: 73 SPSGNIMASSSL--------DAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQ 119
>sp|Q6PBD6|WDR61_XENTR WD repeat-containing protein 61 OS=Xenopus tropicalis GN=wdr61 PE=2
SV=1
Length = 305
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I SIA+S DG YLA+ DG + +FD + +L+ + + + +S D + ++T +
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D ++++ ++ + A GH SWV VAF
Sbjct: 211 DGYIKIYEVQHASLAATLSGHGSWVLNVAF 240
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 285 RYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVF--DYSKEQLICGGKSYYG 342
R + P+ W S+AFS D +LAT G + +F + K++ + +
Sbjct: 100 RAIDAGPVDAW--------SVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKF- 150
Query: 343 ALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
+L A+S DGKY+ +G D ++ ++ + K++ EGH + + F
Sbjct: 151 -ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ +I S+ F G+++A+ D ++++D ++ I KS+ A+ C +S DGK++ +
Sbjct: 105 KANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLAS 164
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 418
+D V++W + KV+ GH+ V+ V F P+ Y S D
Sbjct: 165 AADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEF-----HPSE--------YLLASGSSDR 211
Query: 419 RLLLWDLEMDEIV 431
+ WDLE +V
Sbjct: 212 TIRFWDLEKFHVV 224
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 296 HICQGS---INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMD 352
+I QG +NS+ F+ DG+ LA+ D +R+++ + + +C + + + ++ D
Sbjct: 1194 YILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPD 1253
Query: 353 GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFG 412
G + +G D V++W + K + +GH +WV+ VAF N DG+ M G
Sbjct: 1254 GSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAF-------NPDGS----MLASG 1302
Query: 413 SVGQDTRLLLWDL 425
S Q R LW++
Sbjct: 1303 SGDQTVR--LWEI 1313
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S+ FS DG LA+ G D +R++D S + + Y + +S +G + G
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS 1136
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D +V++W + +K + +GH +WV+ VAF
Sbjct: 1137 DQIVRLWDISSKKCLYTLQGHTNWVNAVAF 1166
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 279 FSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYS--KEQLICG 336
F+ A+ YS I GS+ ++AFS DG AT G +R ++ + KE L C
Sbjct: 850 FTEANLAYSVFTKIL------GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCK 903
Query: 337 GKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWS 396
G + + + +S DGK + +G +D V++W + + + +GH S V V F
Sbjct: 904 GHNSW--VNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVF----- 956
Query: 397 QPNSDGTAETVMYRFGSVGQDTRLLLWDL 425
PNS +M GS Q R LWD+
Sbjct: 957 SPNS------LMLASGSSDQTVR--LWDI 977
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+NS+ F+ DG+ LA+ D +R++D S + + + + + A++ DG + +G
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSG 1304
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 420
D V++W + K + +GH SWVS V F + DGT M GS Q RL
Sbjct: 1305 DQTVRLWEISSSKCLHTFQGHTSWVSSVTF-------SPDGT----MLASGSDDQTVRL 1352
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 298 CQGS---INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGK 354
C+G +NS+ FS DG LA+ D +R++D S Q + K + + +S +
Sbjct: 902 CKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSL 961
Query: 355 YILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSV 414
+ +G D V++W + + + +GH WV VAF N DG+ M GS
Sbjct: 962 MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAF-------NLDGS----MLATGSG 1010
Query: 415 GQDTRLLLWDL 425
Q R LWD+
Sbjct: 1011 DQTVR--LWDI 1019
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 295 WHICQG---SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
++I QG + S+ FS+DG LA+ D +R++D S + + + + +S
Sbjct: 1025 FYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP 1084
Query: 352 DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRF 411
DG + +GG+D +V++W + + +G+ SWV + F PN A
Sbjct: 1085 DGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVF-----SPNGVTLAN------ 1133
Query: 412 GSVGQDTRLLLWDLEMDEIVVPLR 435
GS Q R LWD+ + + L+
Sbjct: 1134 GSSDQIVR--LWDISSKKCLYTLQ 1155
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G + S+AF+ DG+ LAT D +R++D S Q + + + +S DG + +G
Sbjct: 991 GWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASG 1050
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
+D V++W + + +GH S V V F + DG S G D
Sbjct: 1051 SDDQTVRLWDISSGNCLYTLQGHTSCVRSVVF-------SPDGAM------LASGGDDQI 1097
Query: 420 LLLWDL 425
+ LWD+
Sbjct: 1098 VRLWDI 1103
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 296 HICQGS---INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMD 352
H QG +NS+AF+ DG+ LA+ D +R+++ S + + + + + +S D
Sbjct: 1278 HTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPD 1337
Query: 353 GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
G + +G +D V++WS+ + + GH +WV V F
Sbjct: 1338 GTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIF 1376
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ + FS +G LA D +R++D S ++ + + + + A+S DG + +G
Sbjct: 1119 VRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSG 1178
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
D V++W + K + +GH SWV+ V F+
Sbjct: 1179 DQTVRLWDISSSKCLYILQGHTSWVNSVVFN 1209
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S+ FS + LA+ D +R++D S + + + + G + A+++DG + TG
Sbjct: 951 VRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSG 1010
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 421
D V++W + + +GH S V V F +SDG M GS Q R
Sbjct: 1011 DQTVRLWDISSSQCFYIFQGHTSCVRSVVF-------SSDGA----MLASGSDDQTVR-- 1057
Query: 422 LWDL 425
LWD+
Sbjct: 1058 LWDI 1061
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S+ FS DG LA+ D +R++ S + + + + + +S DG + +G +
Sbjct: 1371 VGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSD 1430
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 421
D V++W++ + + GH + V VAF +SDG S D +
Sbjct: 1431 DQTVRLWNISSGECLYTLHGHINSVRSVAF-------SSDGLI------LASGSDDETIK 1477
Query: 422 LWDLEMDEIVVPLR 435
LWD++ E + L+
Sbjct: 1478 LWDVKTGECIKTLK 1491
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ +I S+ F G ++A+ +D ++++D ++ + + + A+ C +S DGK++ +
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 418
+D V++W + K+++ GH V+ V F PN Y S D
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-----HPNE--------YLLASGSSDR 211
Query: 419 RLLLWDLEMDEIV 431
+ WDLE ++V
Sbjct: 212 TIRFWDLEKFQVV 224
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 45/92 (48%)
Query: 301 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG 360
++ + FS DG +LA+ D ++++D + +++ + G + + + + +G
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 361 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
D ++ W +E +VV+ EG V V F+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN 240
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 311 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSM 370
G LAT G D + ++ +K I + + + + I+ G + ++VW +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 371 EDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 426
E K++ GH + + + F Y E V S QDT + LWD+
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPY---------GEFV----ASGSQDTNIKLWDIR 135
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ +I S+ F G ++A+ +D ++++D ++ + + + A+ C +S DGK++ +
Sbjct: 105 KANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLAS 164
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 418
+D V++W + K+++ GH V+ V F PN Y S D
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF-----HPNE--------YLLASGSSDR 211
Query: 419 RLLLWDLEMDEIV 431
+ WDLE ++V
Sbjct: 212 TIRFWDLEKFQVV 224
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 45/92 (48%)
Query: 301 SINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGG 360
++ + FS DG +LA+ D ++++D + +++ + G + + + + +G
Sbjct: 149 AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 361 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
D ++ W +E +VV+ EG V V F+
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN 240
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 311 GTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSM 370
G LAT G D + ++ +K I + + + + I+ G + ++VW +
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92
Query: 371 EDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 426
E K++ GH + + + F Y E V S QDT + LWD+
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPY---------GEFV----ASGSQDTNIKLWDIR 135
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G +NS AFS DG L T DG + ++ QL+ + G + C +S DG +
Sbjct: 22 GEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASA 81
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
D V++W + K + +GH V V+F P+S + S G D R
Sbjct: 82 SCDCTVRLWDVARAKCLRVLKGHQRSVETVSF-----SPDS--------RQLASGGWDKR 128
Query: 420 LLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLSPLV 479
++LWD++ +++ R +G + + S N G+ + D+ ++P V
Sbjct: 129 VMLWDVQSGQML----RLLVGHRDSIQSSDFSPT-VNCLATGSWDSTVHIWDLRMVTPAV 183
Query: 480 AHRV---HTEPLSGLIFTQESVL 499
+H+ H+ +S L ++ +L
Sbjct: 184 SHQALEGHSANISCLCYSASGLL 206
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ SIAFS D +LA+ G ++V+D + + + K CA++ DGK +++G
Sbjct: 236 VKSIAFSPDELWLASAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILVSGAA 295
Query: 362 D 362
D
Sbjct: 296 D 296
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 44/77 (57%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
GS+ S+ FS DG L T D ++++ ++++IC + + + C +S DG+ +++
Sbjct: 103 GSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSV 162
Query: 360 GEDDLVQVWSMEDRKVV 376
+D V++W R+++
Sbjct: 163 SDDRTVKLWDASSRQLI 179
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ ++ + FS LA+ RD +R++ S + +++ G++ +S DG+ +LT
Sbjct: 60 KDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLT 119
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDT 418
+D +++WS+ +K++ HN+WV F + DG SV D
Sbjct: 120 ASDDQSIKLWSVHRQKIICTLREHNNWVRCARF-------SPDGQL------MVSVSDDR 166
Query: 419 RLLLWDLEMDEIV 431
+ LWD +++
Sbjct: 167 TVKLWDASSRQLI 179
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
+ + + ++N+++F G +L T D L++ D + +L+ + G+ C ++S
Sbjct: 221 LQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSR 280
Query: 352 DGKYILTGGEDDLVQVW 368
G + G D V VW
Sbjct: 281 SGDQFASAGSDQQVMVW 297
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 13/126 (10%)
Query: 305 IAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDL 364
+ F T +AT D +RV+D L+ + + A+ ++ G ++LT D
Sbjct: 192 VDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDST 251
Query: 365 VQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWD 424
+++ + + +++ GH S V+F Q F S G D ++++W
Sbjct: 252 LKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQ-------------FASAGSDQQVMVWR 298
Query: 425 LEMDEI 430
D +
Sbjct: 299 TNFDSV 304
>sp|O88879|APAF_MOUSE Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1
PE=1 SV=3
Length = 1249
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 306 AFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLV 365
FS DG +A+ G D L+VF + + K++ +LCCA+S D YI T D V
Sbjct: 622 CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKV 681
Query: 366 QVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 425
++W K+V + H+ V+ F T ++ + D L LWDL
Sbjct: 682 KIWDSATGKLVHTYDEHSEQVNCCHF-----------TNKSNHLLLATGSNDFFLKLWDL 730
Query: 426 EMDE 429
E
Sbjct: 731 NQKE 734
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 292 IARWHIC-QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS 350
I R C QG++ S A S+D T ++ D +++ + + K + G + C A+S
Sbjct: 1077 IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFS 1136
Query: 351 MDGKYILTGGEDDLVQVWSMEDRKV------VAWGEG---HNSWVSGVAF 391
+DG + TG ++ +++W++ D ++ ++ EG H WV+ V F
Sbjct: 1137 LDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCF 1186
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYIL- 357
+ + AFS+D +Y+AT D ++++D + +L+ + + CC ++ ++L
Sbjct: 657 EDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLL 716
Query: 358 -TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF---DSYWSQPNSDGT 403
TG D +++W + ++ GH + V+ F D + ++DGT
Sbjct: 717 ATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 55/147 (37%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDY--SKEQLICGGKSYYGA-----------LLC 346
S+N FS D LA+ DG LR++D + E+ K ++ + + C
Sbjct: 744 NSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803
Query: 347 CAWSMDGKYILTGGEDDL------------------------------------------ 364
C+WS DG I+ ++ +
Sbjct: 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYC 863
Query: 365 VQVWSMEDRKVVAWGEGHNSWVSGVAF 391
V++W+++ R VA GH SWV GV F
Sbjct: 864 VELWNIDSRLKVADCRGHLSWVHGVMF 890
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/73 (20%), Positives = 36/73 (49%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
+ ++ S Y+A DG +++ + ++ G + A+ ++ DGK +++
Sbjct: 961 EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLIS 1020
Query: 359 GGEDDLVQVWSME 371
ED ++QVW+ +
Sbjct: 1021 SSEDSVIQVWNWQ 1033
>sp|Q9C1X1|PWP2_SCHPO Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC713.04c PE=1 SV=1
Length = 854
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 297 ICQGSINSIAFSTDGTYLAT-VGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKY 355
I Q +I+++ ++ G ++A + G L V+++ E + +S+Y AL +S DG+
Sbjct: 294 ITQSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQR 353
Query: 356 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
I+TG +D ++VW M + H S VSG+ F
Sbjct: 354 IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCF 389
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
GS + F++ GT +A+ G D ++++D +LI K + + C ++ G Y+++G
Sbjct: 187 GSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISG 246
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
D +++ + + +++ GH V V F + DG F S G D++
Sbjct: 247 SSDSTIKILDLLEGRLIYTLHGHKGPVLTVTF-------SRDGDL------FASGGADSQ 293
Query: 420 LLLWDLEMDEI 430
+L+W D +
Sbjct: 294 VLMWKTNFDSL 304
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
S+ S+ FS DG L T D ++V+ +++ + + + C +S DG+ I +
Sbjct: 103 ASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASC 162
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
G+D V++W + + + + V F NS GT S G D
Sbjct: 163 GDDRTVRLWDTSSHQCINIFTDYGGSATFVDF-------NSSGTC------IASSGADNT 209
Query: 420 LLLWDLEMDEIV 431
+ +WD+ ++++
Sbjct: 210 IKIWDIRTNKLI 221
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I + F+ G+ +A+ RD +R++ S + K++ ++ +S DG+ ++T +
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASD 122
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 421
D V+VW +E +K + H +WV F + DG S G D +
Sbjct: 123 DKSVKVWGVERKKFLYSLNRHTNWVRCARF-------SPDGRL------IASCGDDRTVR 169
Query: 422 LWDLEMDEIVVPLRRGPLGGSPTF 445
LWD + + GGS TF
Sbjct: 170 LWDTSSHQCINIF--TDYGGSATF 191
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
I + + +N +F G YL + D +++ D + +LI + G +L +S
Sbjct: 221 IQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSR 280
Query: 352 DGKYILTGGEDDLVQVW 368
DG +GG D V +W
Sbjct: 281 DGDLFASGGADSQVLMW 297
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 51.2 bits (121), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQL-ICGGKSYYGALLCCAWSMDGKYILTGG 360
+ S+ FS +L T G+D R+++++ EQL +C G + + + ++ G+ +LT
Sbjct: 1099 VRSVHFSPHHQFLVTSGQDNTARIWNFAGEQLTLCQGHADW--VRNAEFNCHGQILLTAS 1156
Query: 361 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF--DSYW-SQPNSDGTA 404
D ++W +E R+ + +GH SWV F D W ++DGTA
Sbjct: 1157 RDGTARLWDLEGRE-IGLCQGHTSWVRNAQFSPDGQWIVTCSADGTA 1202
Score = 49.7 bits (117), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQL--ICGGKSYYGALLCCAWSMDGKYI 356
Q + FS +G +ATV D R++D S + + + G + G + WS DG+ +
Sbjct: 1547 QSIVYQARFSPEGNLIATVSADHTARLWDRSGKTVAVLYGHQGLVGTV---DWSPDGQML 1603
Query: 357 LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF--DSYWSQPNS-DGTAE 405
+T D ++W + R+++ EGH +WV F D W +S DGTA+
Sbjct: 1604 VTASNDGTARLWDLSGRELLTL-EGHGNWVRSAEFSPDGRWVLTSSADGTAK 1654
Score = 46.2 bits (108), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 297 ICQGS---INSIAFSTDGTYLATVGRDGYLRVFDYSKE--QLICGGKSYYGALLCCAWSM 351
+CQG + + FS DG ++ T DG R++D S + ++ G +++ L WS
Sbjct: 1173 LCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQNWVNNAL---WSP 1229
Query: 352 DGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
DG++I+T D +VWS K + GH+ + G F
Sbjct: 1230 DGQHIITSSSDGTARVWSRHG-KCLGTLRGHDHNIHGARF 1268
Score = 44.3 bits (103), Expect = 0.003, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
Q ++ ++ FS D Y+ T +DG RV++ + +L + Y + +S DG++I+T
Sbjct: 1424 QDAVLNVRFSPDSQYIVTASKDGTARVWNNTGRELAVL-RHYEKNIFAAEFSADGQFIVT 1482
Query: 359 GGEDDLVQVWSMEDRKV 375
+D+ +W + R+V
Sbjct: 1483 ASDDNTAGIWEIVGREV 1499
Score = 42.0 bits (97), Expect = 0.012, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
Q +I ++ +S DG Y AT D ++++ E+ + + + + +S ++++T
Sbjct: 1055 QEAITALDWSADGQYFATASADHTVKLWQRHGEE-VATLRGHEDWVRSVHFSPHHQFLVT 1113
Query: 359 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWS---QPNSDGTAETVMYRFGSVG 415
G+D+ ++W+ ++ +GH WV F+ + + DGTA
Sbjct: 1114 SGQDNTARIWNFAGEQLTLC-QGHADWVRNAEFNCHGQILLTASRDGTAR---------- 1162
Query: 416 QDTRLLLWDLEMDEI 430
LWDLE EI
Sbjct: 1163 ------LWDLEGREI 1171
Score = 38.9 bits (89), Expect = 0.11, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILT 358
QG + ++ +S DG L T DG R++D S +L+ + + + +S DG+++LT
Sbjct: 1588 QGLVGTVDWSPDGQMLVTASNDGTARLWDLSGRELLT-LEGHGNWVRSAEFSPDGRWVLT 1646
Query: 359 GGEDDLVQVWSME 371
D ++W ++
Sbjct: 1647 SSADGTAKLWPVK 1659
Score = 37.7 bits (86), Expect = 0.24, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFD-YSKEQLICGGKSYYGALLCCAWSMDGKYIL 357
+ +I + FS DG ++ T D +++ +E IC G + G + +S D +YIL
Sbjct: 1465 EKNIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGICRG--HEGPVYFAQFSADSRYIL 1522
Query: 358 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
T D+ ++W R ++ GH S V F
Sbjct: 1523 TASVDNTARIWDFLGRPLLTLA-GHQSIVYQARF 1555
Score = 36.6 bits (83), Expect = 0.52, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 332 QLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
+LI + + A+ WS DG+Y T D V++W +V GH WV V F
Sbjct: 1046 ELINVLRGHQEAITALDWSADGQYFATASADHTVKLWQRHGEEVATL-RGHEDWVRSVHF 1104
Query: 392 DSY 394
+
Sbjct: 1105 SPH 1107
Score = 35.8 bits (81), Expect = 0.85, Method: Composition-based stats.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 301 SINSIAFSTDGTYLATVGRDGYLRVFDYSKE-QLICGGKSYYGALLCCAWSMDGKYILTG 359
+I+ FS DG + T D R+ ++KE L+ + + + +S DG+++ T
Sbjct: 1262 NIHGARFSLDGQKIVTYSTDNTARL--WTKEGTLLTILRGHQKEVYDADFSADGRFVFTV 1319
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
D + W + + + GH+ WV F+ P D R +V +D
Sbjct: 1320 SADQTARQWDISQKDTITL-TGHSHWVRNAHFN-----PKGD--------RLLTVSRDKT 1365
Query: 420 LLLWDLEMDEIVVPLRRGPLGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDV--PKLSP 477
LW E + + V FS Q W G+ + +V KL+
Sbjct: 1366 ARLWTTEGECVAVLADHQGWVREGQFSPDGQ---W---IVTGSADKTAQLWNVLGKKLTV 1419
Query: 478 LVAHRVHTEPLSGLIFTQES--VLTVCREGHIKIWMRPG 514
L R H + + + F+ +S ++T ++G ++W G
Sbjct: 1420 L---RGHQDAVLNVRFSPDSQYIVTASKDGTARVWNNTG 1455
>sp|Q5RKI0|WDR1_RAT WD repeat-containing protein 1 OS=Rattus norvegicus GN=Wdr1 PE=1
SV=3
Length = 606
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 32/137 (23%)
Query: 240 PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ 299
PGGD VG +DGN+ VY S GA +KD+ + A +
Sbjct: 455 PGGD-TVAVGGSDGNVRVY--SILGA------TLKDEGKLLEA----------------K 489
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFD----YSKEQLICGGKSYYGALLCCAWSMDGKY 355
G + +A+S DG +LA + VF YS+ + G ++ ++C AWS D ++
Sbjct: 490 GPVTDLAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYG---HHAKIVCLAWSPDNEH 546
Query: 356 ILTGGEDDLVQVWSMED 372
+GG D +V VW++ D
Sbjct: 547 FASGGMDMMVYVWTLSD 563
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLIC---GGKSYYGALLCCAWSMDGKYILT 358
+N + FS DG AT DG + ++D + +C G K++ G + +WS D ++L+
Sbjct: 192 VNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLS 251
Query: 359 GGEDDLVQVWSMEDRKVVA 377
D ++W + VV+
Sbjct: 252 ASGDKTSKIWDVNVNSVVS 270
>sp|Q8TC44|POC1B_HUMAN POC1 centriolar protein homolog B OS=Homo sapiens GN=POC1B PE=1
SV=1
Length = 478
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTG 359
G N + F+ GT +A+ G D ++V+D +L+ + + G + C ++ G Y++T
Sbjct: 187 GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITA 246
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTR 419
D +++ + + +++ +GH V V+F S G F S G DT+
Sbjct: 247 SSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF--------SKGGE-----LFASGGADTQ 293
Query: 420 LLLWDLEMDEI 430
+LLW DE+
Sbjct: 294 VLLWRTNFDEL 304
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S+ FS G LA+ RD +R++ K K++ + +S DG+++ T E
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 122
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D ++VWSM ++ + H WV F
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKF 152
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 292 IARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSM 351
+ + + G +N I+F G YL T DG L++ D + +LI + + G + ++S
Sbjct: 221 LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 280
Query: 352 DGKYILTGGEDDLVQVW 368
G+ +GG D V +W
Sbjct: 281 GGELFASGGADTQVLLW 297
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYS--KEQLICGGKSYYGALLCCAWSMDGKYIL 357
G+I S AFS +G LAT D ++RV++ K LIC G S + + +S DG+ +
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFV--VFSPDGEILA 700
Query: 358 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQD 417
+ G D+ V++WS+ D + GH V VAF P+ + A S D
Sbjct: 701 SCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAF-----HPDGETLA--------SASGD 747
Query: 418 TRLLLWDLE 426
+ LWD++
Sbjct: 748 KTIKLWDIQ 756
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 296 HICQGSIN-------SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGAL---L 345
HIC +++ S+AFS DG LA V D +R+++ Q + K++YG L
Sbjct: 884 HICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCL---KAWYGNTDWAL 940
Query: 346 CCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAE 405
A+S D + + +G D V++W + K ++ EGH ++ G+AF S T
Sbjct: 941 PVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDS 1000
Query: 406 TVMYRFGSVGQDTRLLL 422
+V S GQ ++LL
Sbjct: 1001 SVRLWNISTGQCFQILL 1017
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYG---ALLCCAWSMDGKYI 356
G + S+AFS DG LA+ D +++++Y + + K+Y G ++ A+S D K +
Sbjct: 811 GWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECL---KTYIGHTNSVYSIAYSPDSKIL 867
Query: 357 LTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
++G D +++W + + GH + V VAF
Sbjct: 868 VSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAF 902
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 32/197 (16%)
Query: 287 SKSNPIARWHICQGS-----------INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLIC 335
S + W C G + S FS +G +AT D ++++D+ + + +
Sbjct: 1081 SADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLK 1140
Query: 336 GGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYW 395
+ + A+S DGK + + D V++W + K GH VS VAF
Sbjct: 1141 TLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFS--- 1197
Query: 396 SQPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPL--GGSPTFSTGSQSAH 453
P+ + A S QD + +W+++ E + LR L G + T TG A
Sbjct: 1198 --PDGEVVA--------SGSQDQTVRIWNVKTGECLQILRAKRLYEGMNITGVTGLTKA- 1246
Query: 454 WDNVCPVGTLQPAPSMR 470
+ TLQ ++R
Sbjct: 1247 -----TIFTLQALGALR 1258
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ +AFS DG LA+ D ++++D S+ + + KS+ G + A+S DG+ + +G
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSG 830
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D +++W+ + + GH + V +A+
Sbjct: 831 DRTIKIWNYHTGECLKTYIGHTNSVYSIAY 860
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 16/142 (11%)
Query: 297 ICQGS---INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDG 353
IC+G + + FS DG LA+ G D ++++ I + + A+ DG
Sbjct: 679 ICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDG 738
Query: 354 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 413
+ + + D +++W ++D + GH WV VAF + DG S
Sbjct: 739 ETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAF-------SPDGNT------LAS 785
Query: 414 VGQDTRLLLWDLEMDEIVVPLR 435
D + LWD+ + + L+
Sbjct: 786 SAADHTIKLWDVSQGKCLRTLK 807
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ S+AF DG LA+ D ++++D + + + C A+S DG + +
Sbjct: 729 VFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA 788
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDS 393
D +++W + K + + H WV VAF +
Sbjct: 789 DHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSA 820
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I +A+S DG LA+ D +R++D + + + + + +S +G+ I T
Sbjct: 1065 ILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCST 1124
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D V++W + K + GH +WV +AF
Sbjct: 1125 DQTVKIWDWQQGKCLKTLTGHTNWVFDIAF 1154
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ ++ F G +AT D +++++ S Q + + +L AWS DG+ + +
Sbjct: 1023 VYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASA 1082
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D V++W + V GH++ V F
Sbjct: 1083 DQSVRLWDCCTGRCVGILRGHSNRVYSAIF 1112
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
+ FS D T LA+ DG + +++ +L G G+L CA+S +G + +TG
Sbjct: 100 VRVCQFSPDSTCLASGAADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSS 159
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLL 421
+ VW +D+ E + G+ + SQP SDG +R S GQD ++
Sbjct: 160 CGDLTVW--DDKMRCPHSEKAHDL--GITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVK 215
Query: 422 LWDLEMDEIV 431
+W + I+
Sbjct: 216 IWIVSFTHIL 225
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 314 LATVGRDGYLRVFDYSKEQLICGGKSYYGAL-------LCCAWSMDGKYILTGGEDDLVQ 366
LA+ G+D ++++ S ++ Y L L CA+S DG+ +++G D V
Sbjct: 205 LASCGQDCQVKIWIVSFTHILGFELKYKSTLSGHCAPVLACAFSHDGQMLVSGSVDKSVI 264
Query: 367 VWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 426
V+ ++ H +V+ AF PN T++ GS+ + + +DLE
Sbjct: 265 VYDTNTENILHTLTQHTRYVTTCAF-----APN------TLLLATGSMDKTVNIWQFDLE 313
>sp|Q6FXI8|HAT2_CANGA Histone acetyltransferase type B subunit 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HAT2 PE=3 SV=1
Length = 419
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 52/233 (22%)
Query: 225 DGSVNNSRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQ------ 278
DG + +R ++P D + +G +++Y++SK+G ++ ++ T+
Sbjct: 133 DGEITRAR-----YMPQDDNIIATINGEGKIFIYDRSKNGV-EALLSTLEYHTENGYGLA 186
Query: 279 FSVAHPRY-----SKSNPIARWHICQGSIN---SIAF--------------STDGTYLAT 316
F+ A+ +Y S + IA W I N +I F S++ +
Sbjct: 187 FN-ANEKYSLLSGSDDSNIALWDISNFEKNIKPTITFEDAHTDIINDVKWHSSEAHIFGS 245
Query: 317 VGRDGYLRVFDYSKEQLI--CGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRK 374
V D +++FD Q+I K Y L +S G D+LV ++ + D
Sbjct: 246 VSEDSTMKLFDKRSSQIIHNINTKKPYNTLAFSPFS--SNLFAAAGTDNLVYLYDIRDVS 303
Query: 375 VVAWG-EGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDLE 426
+ GH V+ + FD PN+DG ++Y S G D R ++WDL+
Sbjct: 304 NPLYAMTGHEDAVTAIEFD-----PNNDG----ILY---SSGSDRRTIVWDLQ 344
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 310 DGTYLATVGRDGYLRVFDYSK---EQLICGGKSYYGALLCCAWSMDGKY-ILTGGEDDLV 365
D +AT+ +G + ++D SK E L+ + + A++ + KY +L+G +D +
Sbjct: 145 DDNIIATINGEGKIFIYDRSKNGVEALLSTLEYHTENGYGLAFNANEKYSLLSGSDDSNI 204
Query: 366 QVWSMED-----RKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRL 420
+W + + + + + + H ++ V + S + + FGSV +D+ +
Sbjct: 205 ALWDISNFEKNIKPTITFEDAHTDIINDVKWHS------------SEAHIFGSVSEDSTM 252
Query: 421 LLWDLEMDEIVVPLR-RGP---LGGSPTFSTGSQSAHWDNVCPVGTLQPAPSMRDVPKLS 476
L+D +I+ + + P L SP S +A DN+ + +RDV +
Sbjct: 253 KLFDKRSSQIIHNINTKKPYNTLAFSPFSSNLFAAAGTDNLVYLY------DIRDVS--N 304
Query: 477 PLVAHRVHTEPLSGLIF 493
PL A H + ++ + F
Sbjct: 305 PLYAMTGHEDAVTAIEF 321
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGE 361
I SIA+S DG YLA+ DG + +FD + +L+ + + + +S D + ++T +
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 362 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF---DSYWSQPNSD 401
D ++++ ++ + GH SWV VAF D+++ +SD
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSD 253
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGA-LLCCAWSMDGKYILTGG 360
I S+ FS D L T DGY++++D L G S +G+ +L A+S D + ++
Sbjct: 193 IRSLTFSPDSQLLVTASDDGYIKIYDVQHANL-AGTLSGHGSWVLSVAFSPDDTHFVSSS 251
Query: 361 EDDLVQVWSMEDRKVV 376
D ++VW R V
Sbjct: 252 SDKSIKVWDTSSRSCV 267
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 304 SIAFSTDGTYLATVGRDGYLRVFDYS----KEQLICGGKSYYGALLCCAWSMDGKYILTG 359
++AFS D Y+AT G + +F + L GK +L A+S DGKY+ +G
Sbjct: 111 TVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGK----FILSIAYSPDGKYLASG 166
Query: 360 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
D ++ ++ + K++ EGH + + F
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 343 ALLCCAW---SMDG-KYILTGGEDDLVQVWSMEDRKV-VAWG-EGHNSWVSGVAFDSYWS 396
A+ AW DG + I+TG DDLV+VW D K+ + W EGH V V S
Sbjct: 18 AIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNI----S 73
Query: 397 QPNSDGTAETVMYRFGSVGQDTRLLLWDLEMDEIVVPLRRGPL 439
Q + + ++ D + LWDLE + + + GP+
Sbjct: 74 QNGAIAASSSL---------DAHIRLWDLETGKQIKSMDAGPV 107
>sp|Q54PP7|LVSF_DICDI BEACH domain-containing protein lvsF OS=Dictyostelium discoideum
GN=lvsF PE=4 SV=1
Length = 1154
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 41/236 (17%)
Query: 181 FDQDAKDGHD----LLIGLNSGDVYSVSLRQQLQDVGKKLVGAHHYNKDGSVNNSRCTSV 236
F+Q+ K D L + NS +YSVSL D K+ + S+N
Sbjct: 852 FNQNIKLHKDKISALYLSNNSETIYSVSL-----DSCLKIYSLKEKRQIRSLNLCNLALS 906
Query: 237 TWVPGGDGAFVV-GHADGNLYVYEKSK--------------------------DGAGDSS 269
++ D +++ G D N+YVY G+ DSS
Sbjct: 907 SFQLSKDEKYIIIGSWDNNIYVYSVGNGSISYSIPGHSDAVSCLKLHNNNILVSGSWDSS 966
Query: 270 FPVIKDQTQFSVAHPRYSKSNPIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYS 329
V + Q + A + PIA + I SI S++GT DGYL +D
Sbjct: 967 VKVWRTHRQSNGAIS--IEKTPIADFVDSDTEIRSIDISSNGTIFCAGSSDGYLYFYDLL 1024
Query: 330 KEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAW---GEGH 382
QLI ++ L+C ++ DG I+T D V++ +E ++ ++ GE H
Sbjct: 1025 TLQLIRRISCFFDELVCIKFTPDGSRIITACIDGSVKLIGIEGSEIFSFKVKGEIH 1080
>sp|Q54Y96|SMU1_DICDI WD40 repeat-containing protein smu1 OS=Dictyostelium discoideum
GN=smu1 PE=3 SV=2
Length = 530
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 304 SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKS-----------YYGALLCCAWSMD 352
+I FS D YL T DG++ V+DY+ +L KS + A+LC A+S D
Sbjct: 230 TIKFSPDSKYLLTGSMDGFIEVWDYNTGKL---SKSLAYQSNDDFMMHDDAILCIAFSKD 286
Query: 353 GKYILTGGEDDLVQVWSMEDRKVVAWGE-GHNSWVSGVAF 391
G+++ TG D+ ++VW ++ K + E H + V+ + F
Sbjct: 287 GEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQF 326
>sp|O14727|APAF_HUMAN Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1
PE=1 SV=2
Length = 1248
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 306 AFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLV 365
FS DG +A+ G D L+VF + + K++ +LCCA+S D ++I T D V
Sbjct: 622 CFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKV 681
Query: 366 QVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLWDL 425
++W+ ++V + H+ V+ F + ++ ++ GS D L LWDL
Sbjct: 682 KIWNSMTGELVHTYDEHSEQVNCCHFTN---------SSHHLLLATGS--SDCFLKLWDL 730
Query: 426 EMDE 429
E
Sbjct: 731 NQKE 734
Score = 39.3 bits (90), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 52/147 (35%), Gaps = 55/147 (37%)
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFDYS--KEQLICGGKSYYGAL-----------LC 346
S+N FS D LA+ DG L+++D + E+ K ++ L C
Sbjct: 744 NSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKC 803
Query: 347 CAWSMDGKYILTGGEDDL------------------------------------------ 364
C+WS DG I+ ++ +
Sbjct: 804 CSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYC 863
Query: 365 VQVWSMEDRKVVAWGEGHNSWVSGVAF 391
V++W+ + R VA GH SWV GV F
Sbjct: 864 VELWNTDSRSKVADCRGHLSWVHGVMF 890
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 299 QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYIL- 357
+ + AFSTD ++AT D +++++ +L+ + + CC ++ ++L
Sbjct: 657 EDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLL 716
Query: 358 -TGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF---DSYWSQPNSDGT 403
TG D +++W + ++ GH + V+ F D + ++DGT
Sbjct: 717 ATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT 766
Score = 32.7 bits (73), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Query: 297 IC-QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKY 355
+C QG++ S S D T ++ D +++ + + + + G + C A+S+D
Sbjct: 1082 VCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTL 1141
Query: 356 ILTGGEDDLVQVWSMEDRKVVAWG-----EG---HNSWVSGVAF 391
+ TG ++ +++W++ + +++ EG H WV+ + F
Sbjct: 1142 LATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCF 1185
>sp|Q9I9H8|APAF_DANRE Apoptotic protease-activating factor 1 OS=Danio rerio GN=apaf1 PE=2
SV=1
Length = 1261
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 296 HICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKY 355
H QG++ FS DG+ +A+ G LRVF + + + +++ +LCCA+S D ++
Sbjct: 614 HPHQGAVYYACFSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPDDRH 673
Query: 356 ILTGGEDDLVQVWSME 371
I T D V++W++E
Sbjct: 674 IATCASDRKVKLWNVE 689
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 320 DGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWG 379
DG ++V+D ++ Q++ + GA+L C S DG+ T + +VWS K++
Sbjct: 1072 DGTVKVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKVWSSASWKMLFLL 1131
Query: 380 EGHNSWVSGVAF 391
EGH V F
Sbjct: 1132 EGHKDCVRSCRF 1143
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 297 IC-QGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKY 355
+C +G++ S S+DG AT + +V+ + +++ + + + C +S D K
Sbjct: 1090 VCHEGAVLSCDVSSDGRLFATTSANRTAKVWSSASWKMLFLLEGHKDCVRSCRFSWDNKR 1149
Query: 356 ILTGGEDDLVQVWSMED 372
+ TG ++ +++WSM D
Sbjct: 1150 LATGDDNGEIRLWSMLD 1166
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 304 SIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSMDGKYILTGGEDD 363
S+ F G + A+ D L+++D K+ I K + + ++ DG+++++GGED+
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDN 165
Query: 364 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGSVGQDTRLLLW 423
+V+VW + K++ + H + + F + + + D + W
Sbjct: 166 IVKVWDLTAGKLLTEFKSHEGQIQSLDFHPH-------------EFLLATGSADRTVKFW 212
Query: 424 DLEMDEIV 431
DLE E++
Sbjct: 213 DLETFELI 220
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 27/162 (16%)
Query: 231 SRCTSVTWVPGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSN 290
S C SV + P G+ F G D NL +++ K G K T+
Sbjct: 102 SNCISVDFHPFGE-FFASGSLDTNLKIWDIRKKGC----IHTYKGHTR------------ 144
Query: 291 PIARWHICQGSINSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWS 350
+N + F+ DG ++ + G D ++V+D + +L+ KS+ G + +
Sbjct: 145 ----------GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFH 194
Query: 351 MDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
+ TG D V+ W +E +++ G + V ++F+
Sbjct: 195 PHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFN 236
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
Query: 354 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYRFGS 413
+ ++TGGED V +W++ + GH+S + V FD A V+ G+
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD-----------ASEVLVAAGA 78
Query: 414 VGQDTRLLLWDLEMDEIVVPL 434
+ LWDLE +IV L
Sbjct: 79 ASGTIK--LWDLEEAKIVRTL 97
>sp|O88342|WDR1_MOUSE WD repeat-containing protein 1 OS=Mus musculus GN=Wdr1 PE=1 SV=3
Length = 606
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 32/137 (23%)
Query: 240 PGGDGAFVVGHADGNLYVYEKSKDGAGDSSFPVIKDQTQFSVAHPRYSKSNPIARWHICQ 299
PGGD VG DGN+ VY +KD+ + A +
Sbjct: 455 PGGD-TVAVGGTDGNVRVYSILA--------STLKDEGKLLEA----------------K 489
Query: 300 GSINSIAFSTDGTYLATVGRDGYLRVFD----YSKEQLICGGKSYYGALLCCAWSMDGKY 355
G + +A+S DG +LA + VF YS+ + G ++ ++C AWS D ++
Sbjct: 490 GPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYG---HHAKIVCLAWSPDNEH 546
Query: 356 ILTGGEDDLVQVWSMED 372
+GG D +V VW++ D
Sbjct: 547 FASGGMDMMVYVWTLSD 563
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICG---GKSYYGALLCCAWSMDGKYILT 358
+N + FS DG AT DG + ++D + +C K++ G + +WS D ++L+
Sbjct: 192 VNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLLS 251
Query: 359 GGEDDLVQVWSMEDRKVVA 377
D ++W + VV+
Sbjct: 252 ASGDKTSKIWDVNVNSVVS 270
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 296 HICQGS---INSIAFSTDGTYLATVGRDGYLRVFDY--SKEQLICGGKSYYGALLCCAWS 350
H +G + ++AFS DG LA+ D +R++D ++E+ + G ++Y +L A+S
Sbjct: 495 HTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHY--VLDIAFS 552
Query: 351 MDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSQPNSDGTAETVMYR 410
DG + +G D ++W++ A +GH +V VAF + DG+ M
Sbjct: 553 PDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAF-------SPDGS----MVA 601
Query: 411 FGSVGQDTRLLLWDL 425
GS +D + LWD+
Sbjct: 602 SGS--RDGTIRLWDV 614
>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2
SV=1
Length = 918
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 290 NPIARWHICQGSINSIAFSTDGTYLAT-VGRDGYLRVFDYSKEQLICGGKSYYGALLCCA 348
N I I SI S+A ++ G ++A G L V+++ E + + ++ +++ A
Sbjct: 318 NLIHSLSISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALA 377
Query: 349 WSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 391
+S DG+YI+TGG+D V+VW+ H+S V+GV F
Sbjct: 378 YSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTF 420
Score = 33.9 bits (76), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 302 INSIAFSTDGTYLATVGRDGYLRVFDYSKEQLICGGKSYYGALL-CCAWSMDGKYILTGG 360
+ + F+ G + T DG +R FD + + S C A G+ + G
Sbjct: 415 VTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGA 474
Query: 361 EDDL-VQVWSMEDRKVVAWGEGHNSWVSGVAFD 392
+D + VWSM+ +++ GH +SG+ F+
Sbjct: 475 QDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFN 507
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,710,338
Number of Sequences: 539616
Number of extensions: 10553392
Number of successful extensions: 36905
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 737
Number of HSP's that attempted gapping in prelim test: 31233
Number of HSP's gapped (non-prelim): 5188
length of query: 548
length of database: 191,569,459
effective HSP length: 123
effective length of query: 425
effective length of database: 125,196,691
effective search space: 53208593675
effective search space used: 53208593675
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)