BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008942
(548 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224071371|ref|XP_002303427.1| predicted protein [Populus trichocarpa]
gi|222840859|gb|EEE78406.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 298/543 (54%), Positives = 362/543 (66%), Gaps = 78/543 (14%)
Query: 7 SEDNNISAPSSIFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIFNPMNSDS 66
++ N +SA S IF LF G N++ SLF+DSNPFKR+ + +S EN S N+D
Sbjct: 14 TQKNIVSASSDIFKFLFSGA-NQTAATFSLFTDSNPFKRKPDDPKSNENPS----ANADI 68
Query: 67 LDSN-NSELKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFEPNGTIE 125
D N N K+KK + + NP+ LG EP
Sbjct: 69 QDPNFNGTAMKLKKVKTQ--NPN---------------------------LGLEP----- 94
Query: 126 NEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIA 185
K+E + N +K KKRKRDD+E +Y KKYG +
Sbjct: 95 ---KEEKTLN-----------------------ESGRKRKKRKRDDLESEYEAKKYGPVV 128
Query: 186 KEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE 245
EE +V VG KRKKAD + D+LV ++ EGFDDE KLLRT+FVGNLPLKVKKK LIKE
Sbjct: 129 NNEENVRVVVGAKRKKAD-DAADVLVSKEGEGFDDERKLLRTVFVGNLPLKVKKKALIKE 187
Query: 246 FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM 305
F KFGE++S+RIRS+PI ++KIPRKGAIL K+ N+NADSVHAYIVF +EQS EA+L NM
Sbjct: 188 FSKFGEVESLRIRSMPITESKIPRKGAILLKKFNDNADSVHAYIVFNTEQSAEASLTHNM 247
Query: 306 AVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
AV+GGNHIR+DRACPPRKKLKG DAPLYD K+TVFVGNLPFDVKDEEIYQLF G+ DL S
Sbjct: 248 AVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGNLPFDVKDEEIYQLFTGIKDLAS 307
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKR 425
S+EAVRVIRHPH+ +GKGIAYVLFKTREAANLVIK+RNLKLRDRELR SHA+Q+ TPSKR
Sbjct: 308 SIEAVRVIRHPHIGLGKGIAYVLFKTREAANLVIKKRNLKLRDRELRASHARQDSTPSKR 367
Query: 426 KD--VAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGS----S 479
++ N KK DSRT NR ++K A SYQGL+ASKS +KKVH+ + +
Sbjct: 368 RNSFAGETANLSNKKLATDSRTPDRNNRPDTKAAKSYQGLRASKSGIEKKVHAPANAKRN 427
Query: 480 GVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSRQAGMKRKMESQTPEISQ 539
G K+ KS+TQ+ +R EKRPAVALRKA+A A KD S A KRK++S+TP+ S
Sbjct: 428 GTAKV-KSKTQREKR----QEKRPAVALRKAKATALKDGGASGPARQKRKLDSRTPDSSN 482
Query: 540 RKK 542
RKK
Sbjct: 483 RKK 485
>gi|224138160|ref|XP_002326533.1| predicted protein [Populus trichocarpa]
gi|222833855|gb|EEE72332.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 293/548 (53%), Positives = 355/548 (64%), Gaps = 84/548 (15%)
Query: 3 DKKKSEDNNISAPSSIFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIFNPM 62
D ++++ SA S +F TLF G +++ SSLFSDSNPFKR+ + +S EN S
Sbjct: 10 DTSTAQNHTASALSDVFQTLFSGA-DQTASTSSLFSDSNPFKRKPEDPKSNENPST---- 64
Query: 63 NSDSLDSNNSE-LKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFEPN 121
+ D+ N E +K+KK + E PN LGFEP
Sbjct: 65 DVDTQKPNFYETTEKLKKVKTENPN-----------------------------LGFEP- 94
Query: 122 GTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKY 181
KE + G KKRKRDD+E++Y KKY
Sbjct: 95 --------KEEETLRGR--------------------------KKRKRDDLEREYEAKKY 120
Query: 182 GVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKT 241
G + EE V VG KRK D + D+LV ++ EGFDDE KLLRT+FVGNLPLKVKKKT
Sbjct: 121 GPVVDNEENASVVVGAKRKNTD-DAADVLVSKESEGFDDESKLLRTVFVGNLPLKVKKKT 179
Query: 242 LIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL 301
LIKEF KFG+++SVRIRSVPI ++KIPRKGAIL K+ N+N DSVHAY+VFK+EQS EA+L
Sbjct: 180 LIKEFSKFGDVESVRIRSVPIAESKIPRKGAILLKKFNDNVDSVHAYVVFKNEQSAEASL 239
Query: 302 AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
+ NMAV+GGNHIR+DRACPPRKKLKG DAPLYD K+TVFVGNLPFDVKDEE+YQLF G+
Sbjct: 240 SHNMAVVGGNHIRVDRACPPRKKLKGSDAPLYDNKRTVFVGNLPFDVKDEELYQLFTGIK 299
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCT 421
DL SS+EAVRVIR PH+ +GKGIAYVLFKTREAANLVIK+RNLKLRDRELRLSHA+Q+ T
Sbjct: 300 DLASSIEAVRVIRDPHVGLGKGIAYVLFKTREAANLVIKKRNLKLRDRELRLSHARQDST 359
Query: 422 PSKRKD--VAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGSS 479
PSKRK+ NSP K+ DSR NR + K A SYQGL+ASKS +KKVH+ +
Sbjct: 360 PSKRKNSFAEETANSPNKRLAPDSRAPYHNNRPDRKAAKSYQGLRASKSGVEKKVHAPAH 419
Query: 480 G----VVKMK-KSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSRQAGMKRKMESQT 534
KMK K R +K + KRPAVA RKA+A A KD A KRK++S+T
Sbjct: 420 SKRDVAPKMKSKPREEKHQ------GKRPAVAKRKAKATALKDGGALEPARQKRKLDSRT 473
Query: 535 PEISQRKK 542
P+ S RKK
Sbjct: 474 PDSSNRKK 481
>gi|225427165|ref|XP_002277589.1| PREDICTED: uncharacterized protein LOC100266124 [Vitis vinifera]
Length = 541
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 296/563 (52%), Positives = 376/563 (66%), Gaps = 45/563 (7%)
Query: 2 MDKKKSEDNNISAPSS--IFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIF 59
M KKK +D P S +F TLFG +P + + SLFSDSNPF+R + S S++
Sbjct: 1 MGKKKPKD-----PESGDVFKTLFGYLPKDDASSRSLFSDSNPFRR--KPSLSSQTLPFE 53
Query: 60 NPMNSDSLDSNNSELKKIKKTRQ-EKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGF 118
NP DS E+KK K+T + ++ + L DA A +K+ KL P LG
Sbjct: 54 NPSIPDS------EVKKRKRTEETDETSQTLEDAPKAQHLVEPKKSKNDKLRNPN--LGS 105
Query: 119 EPNGTIENEIKKEHSS---NVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKR-----D 170
E N + N + + + + N G L + N N E K+ +++K K++K+ D
Sbjct: 106 ESNEELLNSVSESNKTLKKNKGKYIILGSE-GNPNSGSEVKEMVDSEKGKEKKKKKRKRD 164
Query: 171 DVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFV 230
++E++Y + YG +AK E GVGEKRK N E MLV + EGFDDE KLLRT+FV
Sbjct: 165 EIEEEYEAQHYGTVAKVE-----GVGEKRKSVVNPAE-MLVSK--EGFDDESKLLRTVFV 216
Query: 231 GNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIV 290
GNLPLK+KKK L+KEF FGE+ SVRIRSVPI+D+K PRKGAI+ K+IN++ DSVHAYIV
Sbjct: 217 GNLPLKIKKKALLKEFSVFGEVQSVRIRSVPILDSKKPRKGAIISKKINDSVDSVHAYIV 276
Query: 291 FKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE-DAPLYDIKKTVFVGNLPFDVK 349
FK+E+S + +L+ NM+VIGGNHIR+DRACPPRKKLKGE DA LYD K+TVFVGNLPFDVK
Sbjct: 277 FKTEESAQTSLSHNMSVIGGNHIRVDRACPPRKKLKGENDASLYDNKRTVFVGNLPFDVK 336
Query: 350 DEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDR 409
EEIYQLFCG++ LESS+EAVRV+R+PH VGKGIAY+LFKT++AANLV+K+RNLKLRDR
Sbjct: 337 AEEIYQLFCGIDSLESSIEAVRVVRNPHTSVGKGIAYILFKTKDAANLVVKKRNLKLRDR 396
Query: 410 ELRLSHAQ-QNCTPSKRKDVAPAVN--SPPKKFVLDSR-TLGSGNRSNSKVAMSYQGLQA 465
+LRL HA+ + TPSKR++ PA SP KK SR +L S NR +K +SYQGLQA
Sbjct: 397 DLRLYHAKPSSTTPSKRRNPTPAEADISPAKKLASGSRISLESSNRLKTKSVISYQGLQA 456
Query: 466 SKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKA---PKDVWVSR 522
SKS KK + VK KS+ QK K Q +KRPAVA RKA+ A S+
Sbjct: 457 SKSGVPKKGRLQTKEAVKF-KSKNQKENTLKEQQKKRPAVAARKAKINAVNAAGGGGGSK 515
Query: 523 QAGMKRKMESQTPEISQR-KKAK 544
Q G KRK+ESQTPE +R KKAK
Sbjct: 516 QTGKKRKLESQTPEGGRRSKKAK 538
>gi|356529724|ref|XP_003533438.1| PREDICTED: nucleolar protein 12-like [Glycine max]
Length = 519
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 276/559 (49%), Positives = 360/559 (64%), Gaps = 85/559 (15%)
Query: 7 SEDNNISAPSSIFTTLFGGIP--NESTVASSLFSDSNPFKRQHRESQSAENESIFNPMNS 64
S+ + +S PSSIF+ LF P +T A+SLFSD NPF+R+ + N + NP +
Sbjct: 13 SQTDTVSTPSSIFSKLFAIAPERTTATTAASLFSDDNPFRRKPTPLSDSTNRTQ-NPNDG 71
Query: 65 D---SLDSNNSELKKIKKTRQEK-PNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFEP 120
D + DS + +K K + +K P P A + S+KS K
Sbjct: 72 DHPVNTDSGEEKKRKRNKEKTDKTPAP----AIDTVVSVIEASDKSEK------------ 115
Query: 121 NGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKK 180
K++ S+ G + + +E +KRKR +VEKD+ EKK
Sbjct: 116 --------KRKRDSDEGKDLIVG---------------AEASGKRKRKRGEVEKDWEEKK 152
Query: 181 YGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKK 240
YG++ + E K VG+ KRK D+ DM+V + EGFDDE KLLRT+FVGNLPLKVKKK
Sbjct: 153 YGIVEEGLENKTVGI--KRKTLDDPA-DMMVSK--EGFDDEDKLLRTVFVGNLPLKVKKK 207
Query: 241 TLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
TL+KEF KFGE++SVRIRSVPI DTK PRKGAIL K+IN+ ADSVHAYIVFK+EQS +A+
Sbjct: 208 TLLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAADSVHAYIVFKTEQSAQAS 267
Query: 301 LAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL 360
L+ NM+++ GNHIR+DRACPPRKK KGE PLYD K+TVFVGNLPFDVKDEE+YQLFCG+
Sbjct: 268 LSHNMSLVEGNHIRVDRACPPRKKHKGESTPLYDDKRTVFVGNLPFDVKDEELYQLFCGI 327
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNC 420
++LESS+EAVRV+R PH+ VGKGIAYVLFKT+EAA V+K+RNLKLRDRELRLSHA+ +
Sbjct: 328 SNLESSIEAVRVVRDPHLNVGKGIAYVLFKTKEAAKFVVKKRNLKLRDRELRLSHAKVDA 387
Query: 421 TPSKRKD----------------VAPAVNSPPKKFVLDSRTLGSGNRSNS---KVAMSYQ 461
TPSKR + +A A ++P K+F + SR+ S N + K SYQ
Sbjct: 388 TPSKRPNPSSAHAPSTPAKRPYPLAHAPSTPAKEFSVASRSPSSSNNMSKSNRKTNASYQ 447
Query: 462 GLQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVS 521
GL+A+KS KK+ Q GE+PK + KRP+VA RKA+AK K+ +
Sbjct: 448 GLRATKSDVHKKI---------------QGGEKPKERMTKRPSVAARKAKAKLGKESDLP 492
Query: 522 RQAGMKRKMESQTPEISQR 540
+QAGMKRK++S+TP+ + R
Sbjct: 493 KQAGMKRKLDSRTPDSTLR 511
>gi|356496350|ref|XP_003517031.1| PREDICTED: nucleolar protein 12-like [Glycine max]
Length = 515
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 274/560 (48%), Positives = 356/560 (63%), Gaps = 87/560 (15%)
Query: 7 SEDNNISAPSSIFTTLFGGIPNESTV--ASSLFSDSNPFKRQHRESQSAENESIFNPMNS 64
SE + +S PSSIF+ LF P ++T A+SLFSD NPF+R+ + N + NP N
Sbjct: 13 SETDAVSTPSSIFSKLFANAPEQTTATAAASLFSDDNPFRRKSAPLSYSTNRTQ-NPNNG 71
Query: 65 D---SLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFEPN 121
D + DS+ + +K K + P PD + +I P EP
Sbjct: 72 DHPVNTDSSEEKKRKRTKDKTSAPAPD-----------------TVSVIEPLE----EPG 110
Query: 122 GTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKY 181
+ + + +VG+E+ R KRKRD+VEK++ EKKY
Sbjct: 111 KKRKRDSDEGKDLSVGAEAIGKR---------------------KRKRDEVEKEWEEKKY 149
Query: 182 GVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKT 241
G + + E K VG+ KRK D+ DM+V + EGFD+E KLLRT+FVGNLPLKVKKKT
Sbjct: 150 GAVEEGIENKTVGI--KRKTLDDPA-DMMVSK--EGFDNEDKLLRTVFVGNLPLKVKKKT 204
Query: 242 LIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL 301
L+KEF KFGE++SVRIRSVPI DTK PRKGAIL K+IN+ ADSVHAYIVFK+EQS +A+L
Sbjct: 205 LLKEFKKFGEVESVRIRSVPIQDTKKPRKGAILAKKINDAADSVHAYIVFKTEQSAQASL 264
Query: 302 AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
A NM+++ GNHIR+DRACPPRKK KGE PLYD K+TVFVGNLPFDVKDEE+Y+LFCG++
Sbjct: 265 AHNMSLVEGNHIRVDRACPPRKKHKGESTPLYDNKRTVFVGNLPFDVKDEELYKLFCGIS 324
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCT 421
+LESS+EA+RV+R PH+ VGKGIAYVLFKT+EAA V+K+RNLKLRDRELRL HA+ + T
Sbjct: 325 NLESSIEAIRVVRDPHLNVGKGIAYVLFKTKEAAKFVVKKRNLKLRDRELRLCHAKADAT 384
Query: 422 PSKRKD----------------VAPAVNSPPKKFVLDSRTLGSGNRSNS---KVAMSYQG 462
PSKR + A A ++P KKF + SR+ S N + K SYQG
Sbjct: 385 PSKRPNPSSAHAPSTPAKRPNPSAHAPSTPAKKFSVASRSPSSSNNMSKSNRKTNTSYQG 444
Query: 463 LQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSR 522
L+A+KS KK+ Q GE+PK + KRP+VA RKA+A K + +
Sbjct: 445 LRATKSDVHKKI---------------QGGEKPKERKTKRPSVAARKAKANLVKQSDLPK 489
Query: 523 QAGMKRKMESQTPEISQRKK 542
QAGMKRK++S+TP+ + R +
Sbjct: 490 QAGMKRKVDSRTPDSTLRNR 509
>gi|255573457|ref|XP_002527654.1| RNA binding protein, putative [Ricinus communis]
gi|223532959|gb|EEF34725.1| RNA binding protein, putative [Ricinus communis]
Length = 830
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 262/372 (70%), Gaps = 53/372 (14%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKE-EGFDDEGKLLRTI 228
DD+E +Y KKYG V VGEKRKKA+N EDMLV ++ EGFDDE KLLRT+
Sbjct: 106 DDIESEYEAKKYGSPEVSRNAVVVAVGEKRKKAENAEEDMLVSKEGGEGFDDESKLLRTV 165
Query: 229 FVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAY 288
FVGNLPLK+KKKTL+KEF +FGEIDSVRIRSVPI+DTKIPRKGA++ K+IN++ADSVHAY
Sbjct: 166 FVGNLPLKMKKKTLVKEFSQFGEIDSVRIRSVPIVDTKIPRKGAVILKKINDSADSVHAY 225
Query: 289 IVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDV 348
IVFK+EQS EA+LA NMAVIGGNHIR+DRACPPRKKLKGE PLYD K+T+FVGNLPFDV
Sbjct: 226 IVFKTEQSAEASLANNMAVIGGNHIRVDRACPPRKKLKGEATPLYDNKRTLFVGNLPFDV 285
Query: 349 KDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRD 408
KDEEIYQLF G+ DLESS+EAVRVIR ++ +G+GIAYVLFKTREA NL +K+RNL +RD
Sbjct: 286 KDEEIYQLFSGIKDLESSIEAVRVIRDSYVGLGRGIAYVLFKTREAVNLALKKRNLNIRD 345
Query: 409 RELRLSHAQQNC--TPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQAS 466
RELRLSHA+++ TPSKRK+ PA KK LDSR G + N
Sbjct: 346 RELRLSHAKKDATSTPSKRKNSFPAETGGTKK--LDSRP-AEGEKRNG------------ 390
Query: 467 KSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSRQAGM 526
KRPAVA RKAR K+ KD +Q G
Sbjct: 391 ----------------------------------KRPAVAARKARVKS-KDGSAIKQTGQ 415
Query: 527 KRKMESQTPEIS 538
KRK++S+TPE S
Sbjct: 416 KRKLDSRTPESS 427
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 12 ISAPSSIFTTLFGGIPNESTVASSLFSDSNPFKRQHRE 49
+S PS+IF TLFG + + + A ++FSDSNPFKR+ E
Sbjct: 22 VSIPSNIFKTLFGDVVEQKS-ALAIFSDSNPFKRKSNE 58
>gi|449462029|ref|XP_004148744.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101206555 [Cucumis sativus]
Length = 559
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 270/587 (45%), Positives = 362/587 (61%), Gaps = 79/587 (13%)
Query: 1 MMDKKKSEDNNISAPSSIFTTLFG--GIPNESTVASSLFSDSNPFKRQHRESQSAENESI 58
M + K ++ +++ S+F TLFG G+ N S+FS NPF+R+
Sbjct: 1 MGNNKITDXPTVASTFSVFDTLFGSAGVENPPV---SIFSTDNPFRRKA----------- 46
Query: 59 FNPMNSDSLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLS----------NKSTK 108
SDS+ +E+ + KK + ++ DL EG T + ++
Sbjct: 47 -----SDSVPPPPAEISR-KKGKDKRVGIDLDSTEGVKTSSEIKKSKKKEKKKSLDRELD 100
Query: 109 LIYPRSILGFEPNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSEN----KKT 164
+ GFE G +++ KK+ + +GSE+ + EG K EN K+
Sbjct: 101 NVDDDGERGFESQGGLKDSSKKK-GTVLGSET------SEKSHGFEGSKLGENVKLMKER 153
Query: 165 KKRKRDDVEKDYVEKKYGV--IAKEE-EGKKVGVGEKRKKADNETEDMLVHRKEEGFDDE 221
KKRKRD++E++Y KKYGV +A++E EG V K++KA ++ +MLV + EGFDDE
Sbjct: 154 KKRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTK--EGFDDE 211
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTKIPRKGAILQKQIN 279
KLLRT+FVGNLPLKVKKK L KEF +FGEIDSVRIRSVPI ++K PRKGAI+ K++N
Sbjct: 212 SKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLN 271
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
E ADS HAY+VFK+E+S +A+L+ NMAV GNHIR+DRACPP KKLK + P+YD K+TV
Sbjct: 272 EAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTV 331
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVGNLPFDVKDEE+YQLFCG++++ SSVEAVRVIR P + VGKG AYV FKTREAAN V+
Sbjct: 332 FVGNLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVV 391
Query: 400 KRRNLKLRDRELRLSHAQQN--CTPSKRKDVAP--AVNSPPKKFVLDSRTLGSGNRSNSK 455
+ L+LR R LRL H + N TP K+++ P A +P KK +DS G G +SK
Sbjct: 392 NNQLLELRGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDS---GLGTPDSSK 448
Query: 456 ------VAMSYQGLQASKSCTQKKVHS-GSSGVVKMKKSRTQKGERP-----KVQPE--- 500
+SYQGL+ASKS +QKK+H+ GSS K KS + E+P + PE
Sbjct: 449 RVTPKATNVSYQGLRASKSGSQKKIHTKGSS--TKWPKSHSNSKEKPIDHKKRRGPEKTS 506
Query: 501 ----KRPAVALRKARAKAPKD-VWVSRQAGMKRKMESQTPEISQRKK 542
KRPAVA RKA A A K+ + +Q G+KRK +S++P S R K
Sbjct: 507 ERKGKRPAVANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNK 553
>gi|169219255|gb|ACA50448.1| putative RNA recognition motif-containing protein [Cucumis sativus]
Length = 566
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 269/580 (46%), Positives = 357/580 (61%), Gaps = 79/580 (13%)
Query: 8 EDNNISAPSSIFTTLFG--GIPNESTVASSLFSDSNPFKRQHRESQSAENESIFNPMNSD 65
E +++ S+F TLFG G+ N S+FS NPF+R+ SD
Sbjct: 15 ETPTVASTFSVFDTLFGSAGVENPPV---SIFSTDNPFRRKA----------------SD 55
Query: 66 SLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLS----------NKSTKLIYPRSI 115
S+ +E+ + KK + ++ DL EG T + ++ +
Sbjct: 56 SVPPPPAEISR-KKGKDKRVGIDLDSTEGVKTSSEIKKSKKKEKKKSLDRELDNVDDDGE 114
Query: 116 LGFEPNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSEN----KKTKKRKRDD 171
GFE G +++ KK+ + +GSE+ + EG K EN K+ KKRKRD+
Sbjct: 115 RGFESQGGLKDSSKKK-GTVLGSET------SEKSHGFEGSKLGENVKLMKERKKRKRDE 167
Query: 172 VEKDYVEKKYGV--IAKEE-EGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTI 228
+E++Y KKYGV +A++E EG V K++KA ++ +MLV + EGFDDE KLLRT+
Sbjct: 168 LEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTK--EGFDDESKLLRTV 225
Query: 229 FVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTKIPRKGAILQKQINENADSVH 286
FVGNLPLKVKKK L KEF +FGEIDSVRIRSVPI ++K PRKGAI+ K++NE ADS H
Sbjct: 226 FVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISKKLNEAADSSH 285
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+VFK+E+S A+L+ NMAV GNHIR+DRACPP KKLK + P+YD K+TVFVGNLPF
Sbjct: 286 AYVVFKTEESAWASLSHNMAVFAGNHIRVDRACPPHKKLKVGNGPIYDPKRTVFVGNLPF 345
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
DVKDEE+YQLFCG++++ SSVEAVRVIR P + VGKG AYV FKTREAAN V+ + L+L
Sbjct: 346 DVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAANSVVNNQLLEL 405
Query: 407 RDRELRLSHAQQN--CTPSKRKDVAP--AVNSPPKKFVLDSRTLGSGNRSNSK------V 456
R R LRL H + N TP K+++ P A +P KK +DS G G +SK
Sbjct: 406 RGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDS---GLGTPDSSKRVTPKAT 462
Query: 457 AMSYQGLQASKSCTQKKVHS-GSSGVVKMKKSRTQKGERP-----KVQPE-------KRP 503
+SYQGL+ASKS +QKK+H+ GSS K KS + E+P + PE KRP
Sbjct: 463 NVSYQGLRASKSGSQKKIHTKGSS--TKWPKSHSNSKEKPIDHKKRRGPEKTSERKGKRP 520
Query: 504 AVALRKARAKAPKD-VWVSRQAGMKRKMESQTPEISQRKK 542
AVA RKA A A K+ + +Q G+KRK +S++P S R K
Sbjct: 521 AVANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNK 560
>gi|449516037|ref|XP_004165054.1| PREDICTED: RNA-binding protein 34-like [Cucumis sativus]
Length = 410
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 227/410 (55%), Positives = 290/410 (70%), Gaps = 36/410 (8%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGV--IAKEE-EGKKVGVGEKRKKADNETEDMLVHRKEEGF 218
K+ KKRKRD++E++Y KKYGV +A++E EG V K++KA ++ +MLV + EGF
Sbjct: 2 KERKKRKRDELEREYEAKKYGVSDVAEDEVEGSGGNVVGKKRKALDDPSEMLVTK--EGF 59
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTKIPRKGAILQK 276
DDE KLLRT+FVGNLPLKVKKK L KEF +FGEIDSVRIRSVPI ++K PRKGAI+ K
Sbjct: 60 DDESKLLRTVFVGNLPLKVKKKALAKEFSQFGEIDSVRIRSVPIDIANSKKPRKGAIISK 119
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
++NE ADS HAY+VFK+E+S +A+L+ NMAV GNHIR+DRACPP +KLK + P+YD K
Sbjct: 120 KLNEAADSSHAYVVFKTEESAQASLSHNMAVFAGNHIRVDRACPPHEKLKVGNGPIYDPK 179
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+TVFVGNLPFDVKDEE+YQLFCG++++ SSVEAVRVIR P + VGKG AYV FKTREAAN
Sbjct: 180 RTVFVGNLPFDVKDEELYQLFCGIDNMGSSVEAVRVIRDPKVNVGKGFAYVFFKTREAAN 239
Query: 397 LVIKRRNLKLRDRELRLSHAQQN--CTPSKRKDVAP--AVNSPPKKFVLDSRTLGSGNRS 452
V+ + L+LR R LRL H + N TP K+++ P A +P KK +DS G G
Sbjct: 240 SVVNNQLLELRGRTLRLFHTKTNPTSTPFKKRNRPPTEADRTPAKKKYVDS---GLGTPD 296
Query: 453 NSK------VAMSYQGLQASKSCTQKKVHS-GSSGVVKMKKSRTQKGERP-----KVQPE 500
+SK +SYQGL+ASKS +QKK+H+ GSS K KS + E+P + PE
Sbjct: 297 SSKRVTPKATNVSYQGLRASKSGSQKKIHTKGSS--TKWPKSHSNSKEKPIDHKKRRGPE 354
Query: 501 -------KRPAVALRKARAKAPKD-VWVSRQAGMKRKMESQTPEISQRKK 542
KRPAVA RKA A A K+ + +Q G+KRK +S++P S R K
Sbjct: 355 KTSERKGKRPAVANRKAVAMATKNGIATPKQTGLKRKSDSRSPGSSHRNK 404
>gi|297742077|emb|CBI33864.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 250/519 (48%), Positives = 314/519 (60%), Gaps = 108/519 (20%)
Query: 2 MDKKKSEDNNISAPSS--IFTTLFGGIPNESTVASSLFSDSNPFKRQHRESQSAENESIF 59
M KKK +D P S +F TLFG +P + + SLFSDSNPF+R + S S++
Sbjct: 1 MGKKKPKD-----PESGDVFKTLFGYLPKDDASSRSLFSDSNPFRR--KPSLSSQTLPFE 53
Query: 60 NPMNSDSLDSNNSELKKIKKTRQEKPNPDLPDAEGAATKTLSLSNKSTKLIYPRSILGFE 119
NP DS E+KK K+T + ++TL + K+ L+ P+
Sbjct: 54 NPSIPDS------EVKKRKRTEETD----------ETSQTLEDAPKAQHLVEPK------ 91
Query: 120 PNGTIENEIKKEHSSNVGSESYLNRQKQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEK 179
+++ K + N+GSES N + NS
Sbjct: 92 -----KSKNDKLRNPNLGSES--NEELLNS------------------------------ 114
Query: 180 KYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKK 239
KRK N E MLV + EGFDDE KLLRT+FVGNLPLK+KK
Sbjct: 115 ------------------KRKSVVNPAE-MLVSK--EGFDDESKLLRTVFVGNLPLKIKK 153
Query: 240 KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEA 299
K L+KEF FGE+ SVRIRSVPI+D+K PRKGAI+ K+IN++ DSVHAYIVFK+E+S +
Sbjct: 154 KALLKEFSVFGEVQSVRIRSVPILDSKKPRKGAIISKKINDSVDSVHAYIVFKTEESAQT 213
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGE-DAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
+L+ NM+VIGGNHIR+DRACPPRKKLKGE DA LYD K+TVFVGNLPFDVK EEIYQLFC
Sbjct: 214 SLSHNMSVIGGNHIRVDRACPPRKKLKGENDASLYDNKRTVFVGNLPFDVKAEEIYQLFC 273
Query: 359 GLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ- 417
G++ LESS+EAVRV+R+PH VGKGIAY+LFKT++AANLV+K+RNLKLRDR+LRL HA+
Sbjct: 274 GIDSLESSIEAVRVVRNPHTSVGKGIAYILFKTKDAANLVVKKRNLKLRDRDLRLYHAKP 333
Query: 418 QNCTPSKRKDVAPAVN--SPPKKFVLDSR-TLGSGNRSNSKVAMSYQGLQASKSCTQKKV 474
+ TPSKR++ PA SP KK SR +L S NR +K +SYQGLQASKS
Sbjct: 334 SSTTPSKRRNPTPAEADISPAKKLASGSRISLESSNRLKTKSVISYQGLQASKS------ 387
Query: 475 HSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAK 513
G +G K + R G R +P RK RAK
Sbjct: 388 -GGKNGSWKARPQRVGGGAR-------KPRNFGRKIRAK 418
>gi|297794545|ref|XP_002865157.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310992|gb|EFH41416.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 509
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/396 (55%), Positives = 278/396 (70%), Gaps = 25/396 (6%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEG 222
K KKRKRD++E +Y KKYG + K++ G+K +E D +V + EGFDDE
Sbjct: 123 KRKKRKRDEIENEYETKKYGSVEKKKVGEKRKKA-------DEVADTMVSK--EGFDDES 173
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPLKVKKK ++KEF KFGE++SVRIRSVPI+D+K RKGAI+ KQINE A
Sbjct: 174 KLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIMLKQINEKA 233
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE-DAPLYDIKKTVFV 341
SVHAY+VF++E+S EA+LA NM++I GNH+R+DRACPPRKK KG+ D LYD K+TVF+
Sbjct: 234 SSVHAYVVFETEKSAEASLAHNMSLIDGNHVRVDRACPPRKKQKGQDDTHLYDPKRTVFM 293
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GNLPFDVKDEE+YQLF G ++LE+S+EAVRVIR PH+ +GKGIAYVLFKTREAANLVIK+
Sbjct: 294 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTREAANLVIKK 353
Query: 402 RNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQ 461
LKLR+RELR+S + + TPSKRK SP +K + + + K +SYQ
Sbjct: 354 GYLKLRERELRISRVKPDATPSKRKSNPSEAYSPAQKRLQKDKVVTP--TPTGKANLSYQ 411
Query: 462 GLQASKSCTQKK-VHSGSSGVVKMKKSRTQKGERP---------KVQPEKRPAVALRKAR 511
G++ASKS KK + S KM+ + E K + +KRPAVA RKA+
Sbjct: 412 GVRASKSGDDKKNPYQKSPAQAKMRPRGSSSNEDNKKSGNNSALKQRSQKRPAVAARKAK 471
Query: 512 A--KAPKDVWVSRQAGMKRKMESQTPE-ISQRKKAK 544
A K K+ R AG KRK E++TPE S++KK K
Sbjct: 472 ANSKGSKESGGKRFAGTKRKQENRTPESFSKKKKTK 507
>gi|15237960|ref|NP_199496.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|8809667|dbj|BAA97218.1| unnamed protein product [Arabidopsis thaliana]
gi|32441262|gb|AAP81806.1| At5g46840 [Arabidopsis thaliana]
gi|110736326|dbj|BAF00133.1| hypothetical protein [Arabidopsis thaliana]
gi|332008049|gb|AED95432.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 501
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 222/395 (56%), Positives = 276/395 (69%), Gaps = 23/395 (5%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEG 222
K KKRKRD++E +Y KKYG + E K+ VGEKRKKAD E D +V + EGFDDE
Sbjct: 115 KRKKRKRDEIENEYETKKYGSV----EMKEKKVGEKRKKAD-EVADTMVSK--EGFDDES 167
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPLKVKKK ++KEF KFGE++SVRIRSVPI+D+K RKGAI+ KQINE A
Sbjct: 168 KLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIMLKQINEKA 227
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG-EDAPLYDIKKTVFV 341
SVHAY+VF++EQS A+LA NM++I GNH+R+DRACPPRKK KG +D LYD K+TVF+
Sbjct: 228 SSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDRACPPRKKQKGHDDTHLYDPKRTVFM 287
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GNLPFDVKDEE+YQLF G ++LE+S+EAVRVIR PH+ +GKGIAYVLFKTREAANLV+K+
Sbjct: 288 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTREAANLVLKK 347
Query: 402 RNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQ 461
LKLR+RELR+S + + TPSKRK SP +K + + + K +SYQ
Sbjct: 348 GYLKLRERELRISRVKPD-TPSKRKSNPSEAYSPAQKRLQKDKVVTPT--PTGKANLSYQ 404
Query: 462 GLQASKSCTQKKV-HSGSSGVVKM----------KKSRTQKGERPKVQPEKRPAVALRKA 510
G++ASKS KK + SS KM KKS + + Q A KA
Sbjct: 405 GVRASKSGDDKKTPYQKSSAQTKMRPRGSSSNDNKKSGNNSASKERSQKRPAVAARKAKA 464
Query: 511 RAKAPKDVWVSRQAGMKRKMESQTPE-ISQRKKAK 544
AK K+ R AG KRK E++TPE S++KK K
Sbjct: 465 NAKGSKESGGKRFAGTKRKQENRTPESFSKKKKTK 499
>gi|21554835|gb|AAM63703.1| unknown [Arabidopsis thaliana]
Length = 501
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 219/392 (55%), Positives = 273/392 (69%), Gaps = 22/392 (5%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEG 222
K KKRKRD++E +Y KYG + E K+ VGEKRKKAD E D +V + EGFDDE
Sbjct: 115 KRKKRKRDEIENEYETXKYGSV----EMKEKKVGEKRKKAD-EVADTMVSK--EGFDDES 167
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPLKVKKK ++KEF KFGE++SVRIRSVPI+D+K RKGAI+ KQINE A
Sbjct: 168 KLLRTVFVGNLPLKVKKKVILKEFSKFGEVESVRIRSVPIVDSKRTRKGAIMLKQINEKA 227
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG-EDAPLYDIKKTVFV 341
SVHAY+VF++EQS A+LA NM++I GNH+R+DRACPPRKK KG +D LYD K+TVF+
Sbjct: 228 SSVHAYVVFETEQSAAASLAHNMSLIDGNHVRVDRACPPRKKQKGHDDTHLYDPKRTVFM 287
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GNLPFDVKDEE+YQLF G ++LE+S+EAVRVIR PH+ +GKGIAYVLFKTREAANLV+K+
Sbjct: 288 GNLPFDVKDEEVYQLFTGKSNLENSIEAVRVIRDPHLNIGKGIAYVLFKTREAANLVLKK 347
Query: 402 RNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQ 461
LKLR+RELR+S + + TPSKRK SP +K + + + K +SYQ
Sbjct: 348 GYLKLRERELRISRVKPD-TPSKRKSNPSEAYSPAQKRLQKDKVVTPT--PTGKANLSYQ 404
Query: 462 GLQASKSCTQKKV-HSGSSGVVKM----------KKSRTQKGERPKVQPEKRPAVALRKA 510
G++AS+S KK + SS KM KKS + + Q A KA
Sbjct: 405 GVRASRSGDDKKTPYQKSSAQTKMRPRGSSSNDNKKSGNNSASKERSQKRPAVAARKAKA 464
Query: 511 RAKAPKDVWVSRQAGMKRKMESQTPEISQRKK 542
AK K+ R AG KRK E++TPEI +KK
Sbjct: 465 NAKGSKESGGKRFAGTKRKQENRTPEIFSKKK 496
>gi|326529257|dbj|BAK01022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 466
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 259/389 (66%), Gaps = 27/389 (6%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKE-EGFDDEGK 223
+KRKRD+VE Y + G EEE + V ++KA ++ E + +E E FDDEGK
Sbjct: 90 RKRKRDEVEAGYERRTLGAAPAEEEVRSRPVVGAKRKATHDVEAVASGGEEDEAFDDEGK 149
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
LLRT+FVGNLPL+ KKK L KEF FG +DSVRIRSVP+ DTKIPRKGA+++ +IN++ D
Sbjct: 150 LLRTVFVGNLPLRTKKKALTKEFATFGVVDSVRIRSVPLGDTKIPRKGAVIKGKINDSVD 209
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+VHAYIVFK EQ AL+ NMA+ GNHIR+D ACPPRKKLKG D PLYD K+TVFVGN
Sbjct: 210 NVHAYIVFKDEQCARTALSHNMALFNGNHIRVDMACPPRKKLKG-DGPLYDRKRTVFVGN 268
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPFDVKDEE+YQLFCG + + VEA+RV+R P +GKGIAYVLFKTREAAN V+K+R
Sbjct: 269 LPFDVKDEELYQLFCGPSGPQGDVEAIRVVRDPDSSLGKGIAYVLFKTREAANSVVKKRG 328
Query: 404 LKLRDRELRLSHAQ-QNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNR--SNSK----- 455
LK+RDR LRL+HA+ + TP +K VA PK+ T GS +R S+SK
Sbjct: 329 LKIRDRFLRLTHAKAADATP--KKTVAGKTRGTPKQKTPS--TPGSKSREGSDSKKRKAP 384
Query: 456 VAMSYQGLQASKSCTQKKVHSGSSGVVK--MKKSRTQKGERPKVQPEKRPAVALRKARAK 513
++SYQGL+++KS KKV V + + ++ G+ + KRPAVA RKA
Sbjct: 385 ASLSYQGLKSTKSGVVKKVKVARRPVNQGNQQGRPSETGQSESARKFKRPAVAARKA--- 441
Query: 514 APKDVWVSRQAGMKRKMESQTPEISQRKK 542
+Q KRK + +TPE + R K
Sbjct: 442 --------KQLTKKRKQDGRTPENTHRSK 462
>gi|145334753|ref|NP_001078722.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|222424348|dbj|BAH20130.1| AT5G46840 [Arabidopsis thaliana]
gi|332008050|gb|AED95433.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 364
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 256/363 (70%), Gaps = 19/363 (5%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
VGEKRKKAD E D +V + EGFDDE KLLRT+FVGNLPLKVKKK ++KEF KFGE++S
Sbjct: 6 VGEKRKKAD-EVADTMVSK--EGFDDESKLLRTVFVGNLPLKVKKKVILKEFSKFGEVES 62
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
VRIRSVPI+D+K RKGAI+ KQINE A SVHAY+VF++EQS A+LA NM++I GNH+R
Sbjct: 63 VRIRSVPIVDSKRTRKGAIMLKQINEKASSVHAYVVFETEQSAAASLAHNMSLIDGNHVR 122
Query: 315 LDRACPPRKKLKG-EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
+DRACPPRKK KG +D LYD K+TVF+GNLPFDVKDEE+YQLF G ++LE+S+EAVRVI
Sbjct: 123 VDRACPPRKKQKGHDDTHLYDPKRTVFMGNLPFDVKDEEVYQLFTGKSNLENSIEAVRVI 182
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
R PH+ +GKGIAYVLFKTREAANLV+K+ LKLR+RELR+S + + TPSKRK
Sbjct: 183 RDPHLNIGKGIAYVLFKTREAANLVLKKGYLKLRERELRISRVKPD-TPSKRKSNPSEAY 241
Query: 434 SPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKV-HSGSSGVVKM-------- 484
SP +K + + + K +SYQG++ASKS KK + SS KM
Sbjct: 242 SPAQKRLQKDKVVTPT--PTGKANLSYQGVRASKSGDDKKTPYQKSSAQTKMRPRGSSSN 299
Query: 485 --KKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSRQAGMKRKMESQTPE-ISQRK 541
KKS + + Q A KA AK K+ R AG KRK E++TPE S++K
Sbjct: 300 DNKKSGNNSASKERSQKRPAVAARKAKANAKGSKESGGKRFAGTKRKQENRTPESFSKKK 359
Query: 542 KAK 544
K K
Sbjct: 360 KTK 362
>gi|115456673|ref|NP_001051937.1| Os03g0854300 [Oryza sativa Japonica Group]
gi|29126350|gb|AAO66542.1| expressed protein [Oryza sativa Japonica Group]
gi|108712166|gb|ABF99961.1| RNA recognition motif, putative, expressed [Oryza sativa Japonica
Group]
gi|113550408|dbj|BAF13851.1| Os03g0854300 [Oryza sativa Japonica Group]
gi|125588687|gb|EAZ29351.1| hypothetical protein OsJ_13417 [Oryza sativa Japonica Group]
gi|215706962|dbj|BAG93422.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/388 (51%), Positives = 253/388 (65%), Gaps = 23/388 (5%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK-KADNETEDMLVHRKEEGFDDEGK 223
+KRKRD+VE + ++ G VGEKRK + +EE FDDE K
Sbjct: 68 RKRKRDEVEAGHERRRLGGAPAPPLPV---VGEKRKVPEEVAAAAGAGQEEEEAFDDESK 124
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
LLRT+FVGNLPLK K+K L KEF FGEI+SVRIRSVP+ DTKIPRKGA+++ +IN++ D
Sbjct: 125 LLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRSVPLTDTKIPRKGAVIKGKINDSVD 184
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+VHAYIVFK EQ AAL+ NMA+ GNH+R+D ACPPRKKLKGE PLYD K+TVFVGN
Sbjct: 185 NVHAYIVFKDEQGARAALSHNMALFDGNHVRVDMACPPRKKLKGE-GPLYDRKRTVFVGN 243
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPFD+KDEE+YQ FCG + E VEA+RV+R P +GKGIAYVLFKTREAAN V+++++
Sbjct: 244 LPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDPDTSLGKGIAYVLFKTREAANTVVRKQD 303
Query: 404 LKLRDRELRLSHAQQ-NCTPSKRKDVAPAVNSPPKKFVL--DSRTLGSGNRSNSKVA-MS 459
K+RDR LRL+HA+ + TP K D K L S++ +++ K + +S
Sbjct: 304 FKIRDRLLRLAHAKSADATPKKTTDAGKTKGGSKHKTALTPSSKSHEGSDKTKRKASTLS 363
Query: 460 YQGLQASKSCTQK--KVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKD 517
YQGL+ASKS K KV S K + ++ G Q KRPAVA RKA
Sbjct: 364 YQGLRASKSGVVKKAKVSQRPSYQGKQQGRTSETGHDASSQKAKRPAVAARKA------- 416
Query: 518 VWVSRQAGMKRKMESQTPEISQR-KKAK 544
+Q KRK+++QTPE + R KKAK
Sbjct: 417 ----KQLAKKRKLDAQTPENTHRSKKAK 440
>gi|125546498|gb|EAY92637.1| hypothetical protein OsI_14381 [Oryza sativa Indica Group]
Length = 441
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 198/388 (51%), Positives = 253/388 (65%), Gaps = 23/388 (5%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK-KADNETEDMLVHRKEEGFDDEGK 223
+KRKRD+VE + ++ G VGEKRK + +EE FDDE K
Sbjct: 68 RKRKRDEVEAGHERRRLGGAPAPPLPV---VGEKRKVPEEVAAAAGAGQEEEEAFDDESK 124
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
LLRT+FVGNLPLK K+K L KEF FGEI+SVRIRSVP+ DTKIPRKGA+++ +IN++ D
Sbjct: 125 LLRTVFVGNLPLKTKRKALTKEFAAFGEIESVRIRSVPLTDTKIPRKGAVIKGKINDSVD 184
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+VHAYIVFK EQ AAL+ NMA+ GNH+R+D ACPPRKKLKGE PLYD K+TVFVGN
Sbjct: 185 NVHAYIVFKDEQGARAALSHNMALFDGNHVRVDMACPPRKKLKGE-GPLYDRKRTVFVGN 243
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPFD+KDEE+YQ FCG + E VEA+RV+R P +GKGIAYVLFKTREAAN V+++++
Sbjct: 244 LPFDIKDEEVYQKFCGSSGSEGDVEAIRVVRDPDTSLGKGIAYVLFKTREAANTVVRKQD 303
Query: 404 LKLRDRELRLSHAQQ-NCTPSKRKDVAPAVNSPPKKFVL--DSRTLGSGNRSNSKVA-MS 459
K+RDR LRL+HA+ + TP K D K L S++ +++ K + +S
Sbjct: 304 FKIRDRLLRLAHAKSADATPKKTTDAGKTKGGSKHKTALTPSSKSHEGSDKTKRKASTLS 363
Query: 460 YQGLQASKSCTQK--KVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKD 517
YQGL+AS+S K KV S K + ++ G Q KRPAVA RKA
Sbjct: 364 YQGLRASQSGVVKKAKVSQRPSYQGKQQGRTSETGHDASSQKAKRPAVAARKA------- 416
Query: 518 VWVSRQAGMKRKMESQTPEISQR-KKAK 544
+Q KRK+++QTPE + R KKAK
Sbjct: 417 ----KQLAKKRKLDAQTPENTHRSKKAK 440
>gi|357117195|ref|XP_003560359.1| PREDICTED: RNA-binding protein 34-like [Brachypodium distachyon]
Length = 461
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 226/332 (68%), Gaps = 29/332 (8%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
KLLRT+FVGNLPL+ KKK L KEF FGE++SVRIRSVP+ DTKIPRKGA+++ +IN+
Sbjct: 143 KLLRTVFVGNLPLRTKKKALTKEFAAFGEVESVRIRSVPLGDTKIPRKGAVIKGKINDLV 202
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+VHAYIVFK EQ AAL+ NMA+ GNHIR+D ACPPRKKL+GE PLYD K+TVFVG
Sbjct: 203 DNVHAYIVFKDEQCARAALSHNMALFNGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVG 261
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NLPFDVKDEE+Y++FCG + + VEA+RV+R P +GKGIAYVLFKTREAAN V+++R
Sbjct: 262 NLPFDVKDEELYKMFCGPSGPQGDVEAIRVVRDPDSSLGKGIAYVLFKTREAANSVVRKR 321
Query: 403 NLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNS------KV 456
+LK+RDR LRL+HA+ K+ D P +K V T GS +R S
Sbjct: 322 DLKIRDRLLRLTHAKAADATPKKTDAGKTHGGPRQKTV---STPGSKSRDGSDSTKRKAS 378
Query: 457 AMSYQGLQASKSCTQKKV----HSGSSGVVKMKKSRT-QKGERPKVQPEKRPAVALRKAR 511
++SYQGL+ASKS KK H + G K + RT + G+ + KRPAVA RKA
Sbjct: 379 SLSYQGLKASKSGVVKKAKVIQHPSNQG--KQPQGRTSETGQTDSARKTKRPAVAARKA- 435
Query: 512 AKAPKDVWVSRQAGMKRKME-SQTPEISQRKK 542
+Q KRK++ S+TP+ + R K
Sbjct: 436 ----------KQLTKKRKLDGSRTPDNTHRSK 457
>gi|242037365|ref|XP_002466077.1| hypothetical protein SORBIDRAFT_01g000750 [Sorghum bicolor]
gi|241919931|gb|EER93075.1| hypothetical protein SORBIDRAFT_01g000750 [Sorghum bicolor]
Length = 440
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/383 (51%), Positives = 253/383 (66%), Gaps = 27/383 (7%)
Query: 166 KRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLL 225
KRKRD++E E++ G A+ K VGEKRK D+ +EE FDDE KLL
Sbjct: 75 KRKRDELEAGR-ERRRGAGAE----KPPRVGEKRKAPDDAAAGAGAGEEEEEFDDESKLL 129
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLPL+ K+K L KEF FGEI+SVRIRSVP++DTK+ RKGA+LQ ++NE D+V
Sbjct: 130 RTVFVGNLPLRTKRKVLTKEFAAFGEIESVRIRSVPLVDTKLSRKGAVLQGKVNELVDNV 189
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
HAYIVFK EQS AL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNLP
Sbjct: 190 HAYIVFKDEQSARTALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNLP 248
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
FDVKDEE+YQ+FCG + E VEA+RVIR P +GKGIAYVLFKTREAAN + +++++K
Sbjct: 249 FDVKDEEVYQVFCGSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTREAANSIARKQDMK 308
Query: 406 LRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSK------VAMS 459
+RDR LRL+HA+ K+ +V P K + T GS + S+ A+S
Sbjct: 309 IRDRLLRLTHAKPVDATPKKTEVQKRSRVPKHKEI---STPGSKSNEGSEKAKRKASALS 365
Query: 460 YQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVW 519
YQGL++SKS KKV K K+S+T + + +KRPAVA RKA
Sbjct: 366 YQGLRSSKSGVVKKVKVNQQPSSKGKQSKTNETG-ASARKDKRPAVAARKA--------- 415
Query: 520 VSRQAGMKRKMESQTPEISQRKK 542
+Q KRK+++ T E + R K
Sbjct: 416 --KQLAKKRKVDASTLENTHRSK 436
>gi|226500848|ref|NP_001140275.1| uncharacterized protein LOC100272319 [Zea mays]
gi|194698806|gb|ACF83487.1| unknown [Zea mays]
gi|413932387|gb|AFW66938.1| hypothetical protein ZEAMMB73_491336 [Zea mays]
Length = 443
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/384 (51%), Positives = 250/384 (65%), Gaps = 30/384 (7%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKL 224
+KRKRD++E E++ G E + VGEKRK D+ + +E FDDE KL
Sbjct: 80 RKRKRDELEAGR-ERRRGA---ENPSR---VGEKRKAPDDAAQGAGEDEEEA-FDDESKL 131
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LRT+FVGNLPL+ K+K LIKEF FGEI+SVRIRSVP++DTK+ R+GA+LQ ++N D+
Sbjct: 132 LRTVFVGNLPLRTKRKVLIKEFAAFGEIESVRIRSVPLVDTKLSRRGAVLQGKVNGLVDN 191
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
VHAYIVFK EQS AAL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNL
Sbjct: 192 VHAYIVFKDEQSARAALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNL 250
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
PFDVKDEE+YQ FC + E VEA+RVIR P +GKGIAYVLFKTREAAN V ++R++
Sbjct: 251 PFDVKDEEVYQAFCSSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTREAANSVARKRDM 310
Query: 405 KLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVA------M 458
K+RDR LRL+HA+ K+ +V P K V T GS + S A +
Sbjct: 311 KIRDRVLRLTHAKPVDAAPKKTEVKKRSRVPNHKEV---STPGSKSNEGSDKAKRKASVL 367
Query: 459 SYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDV 518
SYQGL++SKS KKV + K+ +T + + KRPAVA RKA
Sbjct: 368 SYQGLRSSKSGVVKKVKVTQQPSNQGKQRKTDETG-ATARKAKRPAVAARKA-------- 418
Query: 519 WVSRQAGMKRKMESQTPEISQRKK 542
+Q KRK+++ TPE + R K
Sbjct: 419 ---KQLAKKRKVDASTPENTHRSK 439
>gi|413932388|gb|AFW66939.1| hypothetical protein ZEAMMB73_491336 [Zea mays]
Length = 441
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 196/384 (51%), Positives = 248/384 (64%), Gaps = 32/384 (8%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKL 224
+KRKRD++E E++ G E + VGEKRK D+ + +E FDDE KL
Sbjct: 80 RKRKRDELEAGR-ERRRGA---ENPSR---VGEKRKAPDDAAQGAGEDEEEA-FDDESKL 131
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LRT+FVGNLPL+ K+K LIKEF FGEI+SVRIRSVP+ TK+ R+GA+LQ ++N D+
Sbjct: 132 LRTVFVGNLPLRTKRKVLIKEFAAFGEIESVRIRSVPL--TKLSRRGAVLQGKVNGLVDN 189
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
VHAYIVFK EQS AAL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNL
Sbjct: 190 VHAYIVFKDEQSARAALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNL 248
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
PFDVKDEE+YQ FC + E VEA+RVIR P +GKGIAYVLFKTREAAN V ++R++
Sbjct: 249 PFDVKDEEVYQAFCSSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTREAANSVARKRDM 308
Query: 405 KLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVA------M 458
K+RDR LRL+HA+ K+ +V P K V T GS + S A +
Sbjct: 309 KIRDRVLRLTHAKPVDAAPKKTEVKKRSRVPNHKEV---STPGSKSNEGSDKAKRKASVL 365
Query: 459 SYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDV 518
SYQGL++SKS KKV + K+ +T + + KRPAVA RKA
Sbjct: 366 SYQGLRSSKSGVVKKVKVTQQPSNQGKQRKTDETG-ATARKAKRPAVAARKA-------- 416
Query: 519 WVSRQAGMKRKMESQTPEISQRKK 542
+Q KRK+++ TPE + R K
Sbjct: 417 ---KQLAKKRKVDASTPENTHRSK 437
>gi|224033657|gb|ACN35904.1| unknown [Zea mays]
Length = 441
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 194/391 (49%), Positives = 244/391 (62%), Gaps = 46/391 (11%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKL 224
+KRKRD++E E++ G E + VGEKRK D+ + +E FDDE KL
Sbjct: 80 RKRKRDELEAGR-ERRRGA---ENPSR---VGEKRKAPDDAAQGAGEDEEEA-FDDESKL 131
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LRT+FVGNLPL+ K+K LIKEF FGEI+SVRIRSVP+ TK+ R+GA+LQ ++N D+
Sbjct: 132 LRTVFVGNLPLRTKRKVLIKEFAAFGEIESVRIRSVPL--TKLSRRGAVLQGKVNGLVDN 189
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
VHAYIVFK EQS AAL+ NMA+ GGNHIR+D ACPPRKKL+GE PLYD K+TVFVGNL
Sbjct: 190 VHAYIVFKDEQSARAALSHNMALFGGNHIRVDMACPPRKKLRGE-GPLYDRKRTVFVGNL 248
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
PFDVKDEE+YQ FC + E VEA+RVIR P +GKGIAYVLFKTREAAN V ++R++
Sbjct: 249 PFDVKDEEVYQAFCSSSGSEGDVEAIRVIRDPSSSLGKGIAYVLFKTREAANSVARKRDM 308
Query: 405 KLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVA------M 458
K+RDR LRL+HA+ K+ +V P K V T GS + S A +
Sbjct: 309 KIRDRVLRLTHAKPVDAAPKKTEVKKRSRVPNHKEV---STPGSKSNEGSDKAKRKASVL 365
Query: 459 SYQGLQ-------ASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKAR 511
SYQGL+ TQ+ + G + K T +R KRPAVA RKA
Sbjct: 366 SYQGLRSSKSGVVKKVKVTQQPSNQGK----QRKTDETGATDR----KAKRPAVAARKA- 416
Query: 512 AKAPKDVWVSRQAGMKRKMESQTPEISQRKK 542
+Q KRK+++ TPE + R K
Sbjct: 417 ----------KQLAKKRKVDASTPENTHRSK 437
>gi|384249082|gb|EIE22564.1| hypothetical protein COCSUDRAFT_63712 [Coccomyxa subellipsoidea
C-169]
Length = 557
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-DTKIPRKGAILQKQINEN 281
+L RT+FVGNLP+KVK K + + F ++G ++SVR+RS+P+ DTK+PR A+ ++E+
Sbjct: 236 RLRRTVFVGNLPVKVKVKLIKQTFSQYGTVESVRLRSLPLKEDTKLPRHAAVAAGAVDES 295
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVF 340
S +AY+VF S S ALA NM G HIR+DRA K G LY+ ++VF
Sbjct: 296 RGSANAYVVFSSGGSASHALAHNMREFEGRHIRVDRAAAVSKGTAGGGTQVLYESARSVF 355
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
VGNLPFD +DEE+ +LF +V AVR++R P VGKGIA+V F R AA + +
Sbjct: 356 VGNLPFDTQDEELIELFGDGKGGPGNVTAVRIVRDPKTSVGKGIAFVEFSGRPAARMAMS 415
Query: 401 RRNLKLRDRELRLS 414
LR R++R++
Sbjct: 416 ADGRVLRGRQIRVA 429
>gi|255074609|ref|XP_002500979.1| predicted protein [Micromonas sp. RCC299]
gi|226516242|gb|ACO62237.1| predicted protein [Micromonas sp. RCC299]
Length = 543
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 130/211 (61%), Gaps = 15/211 (7%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-DTKIPRKGAILQKQINENA 282
L RT+FVGNLP+ +K K L F +FG +DSVR+R+VP+ + K+PR G ++ ++ EN
Sbjct: 216 LPRTVFVGNLPVTIKPKKLKTLFSEFGAVDSVRLRNVPVDPEGKMPRGGKVITGKLVENR 275
Query: 283 DSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKL-------KGEDAP--- 331
S +AY+VFK E+S EAA NM + G H+R+DRA P K KG +A
Sbjct: 276 KSTNAYVVFKEEKSVEAACKGMNMREVDGRHVRVDRAVAPSAKANETIAKEKGANAGGEV 335
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFC---GLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
YD +++F+GNLP+DV +E++ +LF +L +VEAVRV+R +GKGIA+VL
Sbjct: 336 AYDHTRSLFLGNLPYDVDEEDVIRLFHRSKEYPELNGAVEAVRVVRDRKTNLGKGIAFVL 395
Query: 389 FKTREAANLVIKRRNLKLRDRELRLSHAQQN 419
F+ A + K+ +RE+R++ A +N
Sbjct: 396 FRKGSDARTGLLLDGTKMGEREVRVTRASKN 426
>gi|303274408|ref|XP_003056525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462609|gb|EEH59901.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 481
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 161/306 (52%), Gaps = 26/306 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENADSV 285
T+FVGNLPL K K L F KFG + SVRIRSVP+ ++ K+PR I+ +++ S
Sbjct: 167 TVFVGNLPLTTKPKLLKSVFSKFGPVVSVRIRSVPVDLEGKMPRGRKIITGKLHTERKST 226
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL-YDIKKTVFVGNL 344
+AYIVFK+ S AA NM G HIR+DRA PP K + L YD + +F+GNL
Sbjct: 227 NAYIVFKNASSVMAATELNMQEFNGRHIRVDRATPPTSKGNRHGSDLAYDHSRCLFLGNL 286
Query: 345 PFDVKDEEIYQLFC---GLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
P+ V +EEI + F +L +S+EAVR++R VGKGIA VLFK + + +
Sbjct: 287 PYAVDEEEIIRFFHRSKEYPELSNSIEAVRIVRDRKTSVGKGIALVLFKRSGDSRVGLLL 346
Query: 402 RNLKLRDRELRLSHAQQNC---TPSKRKDVA-PAVNSPPKKFVLDSRTLGSG--NRSNSK 455
K+ +RE+R+ A +N TP+K+K + N+ + + ++ G R S
Sbjct: 347 DRGKIGEREIRIVRAGKNTTVHTPAKKKRCGVESSNALSARGEARTPSICGGVTQRGTSV 406
Query: 456 VA-MSYQGLQA-------SKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVAL 507
A + ++GL++ + C + SS V T + KRPAVA
Sbjct: 407 GAVVGWEGLRSRPRGKRRDEPCIGDRSDGSSSRAVNTAMKSTPRS-------RKRPAVAA 459
Query: 508 RKARAK 513
RKA+ +
Sbjct: 460 RKAKCR 465
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 118/196 (60%), Gaps = 18/196 (9%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D +L RTIFVGN+ LKV +K + K F KFG I+++RIRSVP+ ++K+P+K A+LQK+ +
Sbjct: 97 DPERLSRTIFVGNVSLKVTRKDIKKLFAKFGNIETIRIRSVPVAESKLPKKVALLQKKFH 156
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+ DS++AY+VFK + S E AL N ++ G H+R+D+A D D K +
Sbjct: 157 KERDSMNAYVVFKEKSSAEKALESNGYLLEGLHLRVDKA----------DFQKVDQKLCL 206
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNLPF + DEE+ F CG +E +R+IR +GKG YV FK + L
Sbjct: 207 FVGNLPFSLSDEELRSHFKDCGW------IEDIRIIRDKATGLGKGFGYVRFKNSDGVML 260
Query: 398 VIKRRNLKLRDRELRL 413
+K + R+LR+
Sbjct: 261 GLKLHESDFKGRKLRV 276
>gi|405973847|gb|EKC38537.1| Serine/threonine-protein kinase PAK 6 [Crassostrea gigas]
Length = 1486
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 124/216 (57%), Gaps = 17/216 (7%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K +TIFVGNLP+ KK L K F KFG I++VR+R VP DTK+P++ A++ K +
Sbjct: 268 DTSKDCKTIFVGNLPVNTDKKELHKLFRKFGSIETVRLRCVPRSDTKLPKRAAVILKDFH 327
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
D++ AY+ FK E+S + AL N ++ HIR+D + D P D K+++
Sbjct: 328 PERDNICAYVCFKEEESAQKALKMNGKLVKSFHIRVD--------MSNHD-PKTDFKRSI 378
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNLP D+K+E++ F CG + VRVIR VGKGI YV FK++++ L
Sbjct: 379 FVGNLPLDIKEEDVRSHFESCG------KIRNVRVIRDSKSGVGKGICYVTFKSKDSVGL 432
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
+K + +L R+ R+ + KR +++ +N
Sbjct: 433 AMKLKGTELSGRKARIEYFTMFKKNKKRPEISKPLN 468
>gi|302846041|ref|XP_002954558.1| hypothetical protein VOLCADRAFT_118759 [Volvox carteri f.
nagariensis]
gi|300260230|gb|EFJ44451.1| hypothetical protein VOLCADRAFT_118759 [Volvox carteri f.
nagariensis]
Length = 1010
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 119/234 (50%), Gaps = 40/234 (17%)
Query: 223 KLLRTIFVGNLP--LKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQIN 279
+L RT+FVGNLP K + + F FG ++SVRIR VP+ +D +PR+ AIL +++
Sbjct: 722 RLSRTVFVGNLPSSFATTPKLVRRLFEGFGAVESVRIRGVPVKMDANMPRRAAILSGKVD 781
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP------------------- 320
A++VFK + +AAL NM ++ G+HIR+D A P
Sbjct: 782 FERGPCTAFVVFKQPEVAQAALGANMQLVEGHHIRVDLAAPRSAAAAAAAAAAAAVGSGK 841
Query: 321 --------------PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN----D 362
G +YD ++VFVGNL F V DEE+ +L G +
Sbjct: 842 VKAKAAAAAAAAAAAAAAAAGSSGGMYDPSRSVFVGNLHFQVTDEELIELVLGQAAMHPE 901
Query: 363 LESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
L +VEAVRV+R VGKG A+VL KT+EAA + LR+R LR++ A
Sbjct: 902 LTDAVEAVRVVRDRENTVGKGFAFVLLKTKEAARAALSLNGQLLRNRPLRVTKA 955
>gi|308798913|ref|XP_003074236.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000408|emb|CAL50088.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 366
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 121/205 (59%), Gaps = 8/205 (3%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINEN 281
+L RT+FVGN+P K L + F G++ S R+R+VP+ D PRK +L+ ++N
Sbjct: 142 ELARTVFVGNVPATTTTKALRRFFGAAGKVKSARLRNVPVEADGHEPRKVKVLKGKLNAE 201
Query: 282 ADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ A++VF K+E + +AA NM G H+R+D A P + E +YD ++VF
Sbjct: 202 RGNATAFVVFEKAESAQKAAETLNMKAFEGRHVRVDLAAKP-SIVSSE--VVYDHTRSVF 258
Query: 341 VGNLPFDVKDEEIYQLFCG---LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+G+LPF+V DE++ +LF +L SVEAVRV+R +GKGI +VLFKT+E A
Sbjct: 259 LGHLPFNVDDEDVIRLFNKNEEYPELRKSVEAVRVVRDRKTTMGKGIGFVLFKTKEQART 318
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTP 422
+ KL DRE+R++ ++ P
Sbjct: 319 ALLLDGSKLGDREIRVTKTSRSKAP 343
>gi|326428919|gb|EGD74489.1| hypothetical protein PTSG_05853 [Salpingoeca sp. ATCC 50818]
Length = 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 111/197 (56%), Gaps = 18/197 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI-LQKQINENADS 284
RTIFVGNLP+ K K L K F +FG+I+S R R+ ++ K K A+ L++++ +S
Sbjct: 121 RTIFVGNLPINTKPKALKKLFSQFGKIESCRFRTTNLMAHKGGAKAAVLLRRKVGGEENS 180
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
V+AY+VF + AAL N V H+R+D + G + L KTVFVGNL
Sbjct: 181 VNAYVVFAEDAMARAALKCNGMVFNERHLRVD--------MAGSNTRLPPT-KTVFVGNL 231
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
PFDV +EE+Y F D +V VRVIR +RVGKG AYV F E+ +L +
Sbjct: 232 PFDVTEEELYAAF----DEAGTVAGVRVIRDKVLRVGKGFAYVSFALEESVSLALLLDGK 287
Query: 405 KLRDRELRLSHAQQNCT 421
KLR RE+R+ Q C
Sbjct: 288 KLRTREMRV----QRCA 300
>gi|452824970|gb|EME31969.1| nucleolar RNA-binding protein [Galdieria sulphuraria]
Length = 254
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 123/194 (63%), Gaps = 19/194 (9%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
+L RTIFVGN+PL+ +++ LIK F G I+SVR RS+P+ + K+P++ A+L +
Sbjct: 21 RLARTIFVGNVPLQTRREKLIKFFKNCGPIESVRFRSIPVKNVKLPKRAAVLSGERLPER 80
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
DS++AY+VF+++ + + AL+ N +V H+++DR ++ P + +FVG
Sbjct: 81 DSMNAYVVFENKVAVDIALSLNGSVFQNKHLKIDR----------DERPTVSVGYCIFVG 130
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NLPFDV+DE++Y++F + SV+ VR++R H GKG YV FK E+ +++ R
Sbjct: 131 NLPFDVEDEQVYEVFSKI----GSVKYVRIVRDKHTGFGKGFGYVCFK--ESISVIAAVR 184
Query: 403 ---NLKLRDRELRL 413
+++++DR +R+
Sbjct: 185 MNGSVQVKDRVVRI 198
>gi|147898640|ref|NP_001085272.1| RNA binding motif protein 34 [Xenopus laevis]
gi|62185676|gb|AAH92323.1| LOC443584 protein [Xenopus laevis]
Length = 414
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 119/204 (58%), Gaps = 18/204 (8%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+TL F +FG I+S+R RSV + + RK
Sbjct: 159 VNRAEERIKNK----RTVFVGNLPADCTKQTLTSLFKEFGPIESLRFRSVARAEANLSRK 214
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ ++++AY+VFK E S AL N A +G G HIR+D A
Sbjct: 215 VATIQRKVHPKRNNINAYVVFKDESSASKALMRNGAEVGSGFHIRVDMA---------SK 265
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ +D K++ FVGNLP+D+++E I + F D V+ VR+IR +GKG YVLF
Sbjct: 266 SSSHDNKRSAFVGNLPYDIEEESIRKHFSQCGD----VQGVRIIRDQKTGIGKGFGYVLF 321
Query: 390 KTREAANLVIKRRNLKLRDRELRL 413
++ +A L +K N +L R +R+
Sbjct: 322 ESADAVQLALKLNNSQLSGRRIRV 345
>gi|49114983|gb|AAH72838.1| LOC443584 protein, partial [Xenopus laevis]
Length = 403
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 119/204 (58%), Gaps = 18/204 (8%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+TL F +FG I+S+R RSV + + RK
Sbjct: 159 VNRAEERIKNK----RTVFVGNLPADCTKQTLTSLFKEFGPIESLRFRSVARAEANLSRK 214
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ ++++AY+VFK E S AL N A +G G HIR+D A
Sbjct: 215 VATIQRKVHPKRNNINAYVVFKDESSASKALMRNGAEVGSGFHIRVDMA---------SK 265
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ +D K++ FVGNLP+D+++E I + F D V+ VR+IR +GKG YVLF
Sbjct: 266 SSSHDNKRSAFVGNLPYDIEEESIRKHFSQCGD----VQGVRIIRDQKTGIGKGFGYVLF 321
Query: 390 KTREAANLVIKRRNLKLRDRELRL 413
++ +A L +K N +L R +R+
Sbjct: 322 ESADAVQLALKLNNSQLSGRRIRV 345
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 21/231 (9%)
Query: 213 RKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
+K+E D K RT+FVGNLP K+TL + F ++G I+SVR RS+ + +K A
Sbjct: 221 KKKEHPDTPDKNERTLFVGNLPGTATKRTLRQMFCQYGPIESVRFRSIVPAREGLSKKVA 280
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
L K ++ +V+AY+V++ ++ + ALA N V+ G HIR+D + G+ P
Sbjct: 281 FLTKSLHSTKQTVNAYVVYREREAVKKALALNGTVVLGKHIRVD--------VVGDTKPQ 332
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
TVFVGNLP +V+DEE++ F D V +VR+IR +GKG +V FK R
Sbjct: 333 ASESHTVFVGNLPHEVQDEELWTFFADCGD----VTSVRLIRDKGTGMGKGFGFVTFKNR 388
Query: 393 EAANLVIKRRNLKLRDRELRLSH---------AQQNCTPSKRKDVAPAVNS 434
+ A L ++ +L R +R++ A Q TP +R A +N+
Sbjct: 389 DGAALALEMAGRELCGRPVRVTEFSKQAAAKKASQQGTPGQRLRKAKQLNA 439
>gi|159155220|gb|AAI54771.1| Rbm34 protein [Danio rerio]
Length = 410
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 27/271 (9%)
Query: 172 VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADN---ETEDMLVHRKEEGFDDEG--KLLR 226
EK +++ + +EEG+ KRK+AD E E H+K F+ E K+ R
Sbjct: 89 AEKKLQDRESALQNADEEGQASAKKVKRKRADGGEEEEERPTKHKKTVKFNAEERLKMKR 148
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP KKK L+ F K G I+SVR RSV D + RK A +Q++++ +++
Sbjct: 149 TVFVGNLPSSCKKKDLLSVFKKSGVIESVRFRSVIREDPTMSRKVAAIQRKVHPKKQNIN 208
Query: 287 AYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYIVFK E+S AL +N I G +IR+DR K +D K+++FVGNLP
Sbjct: 209 AYIVFKEEESATDALKWNGHEIQAGFYIRVDRVSQHSK---------HDHKRSIFVGNLP 259
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+D+ + + F CG ++EAVR++R +GKG YVLF++ ++ L +K
Sbjct: 260 YDISELPLQNHFQECG------NIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALKLNG 313
Query: 404 LKLRDRELRLSHA----QQNCTPSKRKDVAP 430
L+ R++R+ + ++ TP RK P
Sbjct: 314 STLQQRKIRVKRSVKKEKEKKTPPGRKAEGP 344
>gi|50539824|ref|NP_001002382.1| RNA-binding protein 34 [Danio rerio]
gi|49900339|gb|AAH75875.1| RNA binding motif protein 34 [Danio rerio]
Length = 411
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 140/250 (56%), Gaps = 23/250 (9%)
Query: 172 VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKAD---NETEDMLVHRKEEGFDDEG--KLLR 226
EK +++ + +EEG+ KRK+AD +E E H+K F+ E K+ R
Sbjct: 90 AEKKLQDRESALQNADEEGQASAKKVKRKRADGGEDEEERPTKHKKTVKFNAEERLKMKR 149
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP KKK L+ F K G I+SVR RSV D + RK A +Q++++ +++
Sbjct: 150 TVFVGNLPSSCKKKDLLSVFKKSGVIESVRFRSVIREDPTMSRKVAAIQRKVHPKKQNIN 209
Query: 287 AYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYIVFK E+S AL +N I G +IR+DR K +D K+++FVGNLP
Sbjct: 210 AYIVFKEEESATDALKWNGHEIQAGFYIRVDRVSQHSK---------HDHKRSIFVGNLP 260
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+D+ + + F CG ++EAVR++R +GKG YVLF++ ++ L +K
Sbjct: 261 YDISELPLQNHFQECG------NIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALKLNG 314
Query: 404 LKLRDRELRL 413
L+ R++R+
Sbjct: 315 STLQQRKIRV 324
>gi|390363636|ref|XP_781943.2| PREDICTED: uncharacterized protein LOC576551 [Strongylocentrotus
purpuratus]
Length = 394
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L RT+FVGNLP+ + KK L F +G I+S+R RS+ D + +K A +++++N
Sbjct: 150 LARTVFVGNLPVNITKKELKGLFKIYGAIESMRFRSMGAADPSMSKKVAAIKQELNPKKT 209
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
S +AYIVF+ EQ AALA N ++ +H+R+D A +K +D+K+++FVGN
Sbjct: 210 SFNAYIVFEEEQCARAALASNGKIVNKHHMRVDIAGNNKK---------HDMKRSLFVGN 260
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
L F++ DE + F +VE VR+IR VGKG YVLF+ + +K
Sbjct: 261 LAFNIDDEAVRNHFEEF----GTVEGVRLIRDKATGVGKGFGYVLFEDSSSVQFALKMDG 316
Query: 404 LKLRDRELRLSHA 416
KL R LR+ A
Sbjct: 317 TKLNGRPLRVKRA 329
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 12/199 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP +K + F K+G I+S+R RS+ + +K A + K ++ N +V
Sbjct: 239 RTIFVGNLPGTATQKAVRHVFSKYGTIESIRFRSIVPAKESLSKKVAFISKALHSNKQTV 298
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+VFK++++ AL+ N V+ GNHIR+D P+ ++ K+TVFVGNL
Sbjct: 299 NAYVVFKAKEAVNKALSLNGGVLFGNHIRVDCVGAPKSQVSE--------KQTVFVGNLA 350
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V+DEE+++LF D V AVR++R +GKG +V FK + A L ++ +
Sbjct: 351 HEVQDEELWKLFAECGD----VVAVRLVRDKVTGMGKGFGFVTFKQMDGAALALEMTGRE 406
Query: 406 LRDRELRLSHAQQNCTPSK 424
+ R +R+S + P K
Sbjct: 407 VSGRPIRVSPFSKQAVPKK 425
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 16/190 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP V KK L K F +FG+ID++R+R IP++ A + +++ SV
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNELHPKMKSV 401
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F+SE+ST+ AL+ N GN+IR+D + +K D Y+ KK+VF+GNL
Sbjct: 402 YAYIRFESEESTKKALSVNGRKFEGNYIRVDMS------MKSNDR--YETKKSVFIGNLH 453
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
F+V D+ + F CG +++VR+IR VGKG YV FK+ +A L ++
Sbjct: 454 FNVDDDSVRNHFKRCG------EIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 404 LKLRDRELRL 413
+ +RE+R+
Sbjct: 508 TTILNREIRV 517
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 44/269 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKE----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
RTIFVGNLP+ V +K +++ F +FG I+ +R RS+ ++K+PRK A KQ ++
Sbjct: 173 RTIFVGNLPICVTEKAALQQLKTLFSQFGTIECIRFRSIAF-NSKLPRKLAYSAKQFHDK 231
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
DS++AYIV++ +S AL + + H+R+DR+ ++K YD KK++F+
Sbjct: 232 RDSLNAYIVYELPESVSKALELHGTLFLEKHLRVDRSETTQQK-------KYDHKKSIFI 284
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GNL FD+ +E ++ F D+ + VRVIR + VGKG YV F R + +L +K
Sbjct: 285 GNLLFDISEEALWSFFSDCGDITN----VRVIRDRNTNVGKGFGYVQFAERSSVSLALKL 340
Query: 402 RNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQ 461
+ L+ R++R+S + S NS + +
Sbjct: 341 NDTDLQGRQVRISRSNPTLAES----------------------------GNSTTKSTAE 372
Query: 462 GLQASKSCTQKKVHSGSSGVVKMKKSRTQ 490
GL+ASKS K+V S +K K R++
Sbjct: 373 GLRASKSDNIKRVMGRVSKKIKTKSVRSK 401
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 16/190 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP V KK L K F +FG+ID++R+R IP++ A + ++ SV
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNDLHPKMKSV 401
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F+SE+ST+ AL+ N GN++R+D + K Y+ KK+VF+GNL
Sbjct: 402 YAYIRFESEESTKKALSINGTKFEGNYVRVDMSTKSNDK--------YETKKSVFIGNLH 453
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
F+V D+ + F CG +++VR+IR VGKG YV FK+ +A L ++
Sbjct: 454 FNVDDDSVRNHFKRCG------EIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 404 LKLRDRELRL 413
+ +RE+R+
Sbjct: 508 TTILNREVRV 517
>gi|242022697|ref|XP_002431775.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212517100|gb|EEB19037.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 292
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 17/189 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K + K F +FG++ S RIR +PI + +K A ++K+ N +SV
Sbjct: 31 TVFVGNLPITYDKTKVTKLFSRFGKVVSARIRCIPIASINMKKKVAAIKKEFNPRRNSVV 90
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+ F SE S +AA+ N ++ G+H+R++ A E + D K +FVG LPF
Sbjct: 91 AYVKFASEDSVKAAVDANGMIVDGHHLRINLA---------ETSTEIDTNKAIFVGGLPF 141
Query: 347 DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
D++D+E+++ F CG + +VR+IR H +GKGI YV F + A L ++
Sbjct: 142 DIEDDELWEFFENCG------KINSVRIIRDSHTSMGKGIGYVNFDSTAAVELALQMDGQ 195
Query: 405 KLRDRELRL 413
+L+ R + +
Sbjct: 196 ELKKRCINV 204
>gi|42794007|ref|NP_766350.2| RNA-binding protein 34 [Mus musculus]
gi|148679875|gb|EDL11822.1| RNA binding motif protein 34, isoform CRA_a [Mus musculus]
gi|187954471|gb|AAI41279.1| RNA binding motif protein 34 [Mus musculus]
Length = 442
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 26/213 (12%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+++SVR RSV + + +K A ++++ + + S+
Sbjct: 189 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 248
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D A + K++VFVGNL
Sbjct: 249 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASR----------DKRSVFVGNL 298
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ ++D + + F CG S+ AVR++R+P VG+G YVLF+ +A +L +K
Sbjct: 299 PYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 352
Query: 403 NLKLRDRELRLSHA-------QQNCTPSKRKDV 428
N +L R+LR+ + QQN PS +KDV
Sbjct: 353 NSELMGRKLRVMRSVNKEKLKQQNSNPSLKKDV 385
>gi|432843238|ref|XP_004065582.1| PREDICTED: RNA-binding protein 34-like [Oryzias latipes]
Length = 421
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 133/251 (52%), Gaps = 30/251 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KKT++ F G I+S+R RS+ D + RK A +++Q++ S+
Sbjct: 161 RTVFVGNLPVTCTKKTVLNLFKDKGSIESIRFRSLVREDPAMSRKLAAIRRQVHPQRKSM 220
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E AL N M V +IR+DRA D +D K++VFVGNL
Sbjct: 221 NAYVVFKEEAGAIRALESNGMEVETNYNIRVDRAT---------DGSSHDHKRSVFVGNL 271
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
PFD+ ++ + F CG +VEAVR++R +GKG YVLF++ ++ L ++
Sbjct: 272 PFDIHEQAFRKHFETCG------TVEAVRLVRDKDSGLGKGFGYVLFESADSVQLALELN 325
Query: 403 NLKLRDRELRLSHA-----QQNCTPSKRKDVAPAVN------SPPKKFVLDSRTLGSGNR 451
KL R +R+ + Q+N T K PA N P +F + G+ +
Sbjct: 326 ASKLEGRSIRVKRSVKKEKQKNQTGGKETAKKPAKNKRSWQDKSPGRFKSSKKVFGNQQK 385
Query: 452 SNSKVAMSYQG 462
S K + S++G
Sbjct: 386 SEKK-STSFKG 395
>gi|326915530|ref|XP_003204069.1| PREDICTED: RNA-binding protein 34-like [Meleagris gallopavo]
Length = 475
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 124/232 (53%), Gaps = 26/232 (11%)
Query: 183 VIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTL 242
+AK + G K++K NE E+M+ ++ RT+FVGNLP+ + L
Sbjct: 123 AVAKSDVNSGTGRTVKQEKKKNEAEEMIKNK------------RTVFVGNLPVNYTAQML 170
Query: 243 IKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA 302
F ++G+I+S+R RSV + + RK A ++++I+ N ++AY+VFK E + AL
Sbjct: 171 KSLFKEYGQIESIRFRSVVPAEVALSRKLATIKRKIHPNVKYINAYVVFKEEHAAVKALK 230
Query: 303 FN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
N V G HIR+D A L+D K++VF+GNL +D+ D + + F
Sbjct: 231 KNGTEVASGFHIRVDSA---------SKNSLHDNKRSVFLGNLAYDISDSAVREHFADCG 281
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
D V AVR++R +GKG YVLF+ +A +L +K N L R+LR+
Sbjct: 282 D----VVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMGRKLRV 329
>gi|253683404|ref|NP_001156572.1| RNA binding motif protein 34 [Acyrthosiphon pisum]
gi|239792368|dbj|BAH72536.1| ACYPI010185 [Acyrthosiphon pisum]
Length = 418
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 116/196 (59%), Gaps = 16/196 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGN+P+ VK + K F +FGE+++ R+RSV + + ++P++ +I++ + D+
Sbjct: 178 RTVFVGNVPVSVKMSAVKKLFKQFGEVETTRLRSVAVKNLEVPKRVSIMKGDFHPQRDTA 237
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ Y+ FK+ + + AL N G+ IR+D A K ++KK +F+GNLP
Sbjct: 238 NVYVRFKTIEEAQKALVLNATQFEGHTIRVDMALNSNHK--------QNMKKGIFIGNLP 289
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+ ++++EI+ F CG ++ AVR++R V KG YV F+T+E+ L ++ +
Sbjct: 290 YSIQEDEIWDYFKDCG------TISAVRIVRDNATGVSKGFGYVDFETKESVELAMQIKG 343
Query: 404 LKLRDRELRLSHAQQN 419
K+++RE+R+ + N
Sbjct: 344 KKVQNREIRVKRIENN 359
>gi|89266850|emb|CAJ83915.1| novel protein containing RNA recognition motifs. (a.k.a. RRM, RBD,
or RNP domain) [Xenopus (Silurana) tropicalis]
Length = 406
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 117/206 (56%), Gaps = 22/206 (10%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+R EE ++ RT+FVGNLP K+ L F +FG I+S+R RSV + + RK
Sbjct: 157 VNRAEERIKNK----RTVFVGNLPADYTKQMLKSLFKEFGHIESMRFRSVARAEANLSRK 212
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A +Q++++ +++AYIVFK E S AL N A +G G HIR+D A
Sbjct: 213 VAAIQRKVHPKRKNINAYIVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSS------ 266
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+D K++ F+GNLP+++++E + F CG V+ VR+IR +GKG YV
Sbjct: 267 ---HDNKRSAFIGNLPYEIEEEAVRDHFSECG------KVQGVRIIRDQKTGIGKGFGYV 317
Query: 388 LFKTREAANLVIKRRNLKLRDRELRL 413
LF++ +A L +K N +L R++R+
Sbjct: 318 LFESADAVQLALKLNNSELSGRKIRV 343
>gi|52345686|ref|NP_001004890.1| RNA binding motif protein 34 [Xenopus (Silurana) tropicalis]
gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenopus (Silurana) tropicalis]
Length = 412
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 110/191 (57%), Gaps = 18/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP K+ L F +FG I+S+R RSV + + RK A +Q++++ ++
Sbjct: 168 RTVFVGNLPADYTKQMLKSLFKEFGHIESMRFRSVARAEANLSRKVAAIQRKVHPKRKNI 227
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AYIVFK E S AL N A +G G HIR+D A +D K++ F+GNL
Sbjct: 228 NAYIVFKDESSASQALKRNGAEVGSGFHIRVDIASKRSS---------HDNKRSAFIGNL 278
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+++++E + F CG V+ VR+IR +GKG YVLF++ +A L +K
Sbjct: 279 PYEIEEEAVRDHFSECG------KVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLN 332
Query: 403 NLKLRDRELRL 413
N +L R++R+
Sbjct: 333 NSELSGRKIRV 343
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 119/199 (59%), Gaps = 21/199 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTI+VGN+P ++ KT+ K F FGEIDS+R+R V D+++ K A + K+++ +V
Sbjct: 332 RTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVATITKKMHPKVSTV 391
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ Y+ FK EQS + AL N +G N +R+D + K +D +D K+ VF+GN+P
Sbjct: 392 YVYVAFKEEQSAKDALKLNGHKLGENTLRVDLST------KNKD---HDQKRAVFLGNIP 442
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
FD+ ++E+ + F CG +E+VR+++ + +GI YV F+ +++ L ++
Sbjct: 443 FDITEDEVRKHFDSCG------KIESVRIVKDRKSGLSRGIGYVNFENQDSVTLALELNG 496
Query: 404 LKLRDRELRLSHAQQNCTP 422
L++RE+R+ Q C+P
Sbjct: 497 TNLKNREIRV----QICSP 511
>gi|62078761|ref|NP_001014037.1| RNA-binding protein 34 [Rattus norvegicus]
gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|56541178|gb|AAH87155.1| RNA binding motif protein 34 [Rattus norvegicus]
gi|149043245|gb|EDL96777.1| RNA binding motif protein 34 [Rattus norvegicus]
Length = 428
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 121/212 (57%), Gaps = 26/212 (12%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+++SVR RSV + + +K A ++++ + + S+
Sbjct: 183 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSI 242
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E++ AL N A I G IR+D A + K++VFVGNL
Sbjct: 243 NAYVVFKEERAAAKALQRNGAQIAEGFRIRVDLASETASR----------DKRSVFVGNL 292
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ V + + + F CG S+ AVR++R+P VG+G YVLF+ +A +L +K
Sbjct: 293 PYRVDESALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 346
Query: 403 NLKLRDRELRLSHA-------QQNCTPSKRKD 427
N +L R+LR+ + QQN PS +KD
Sbjct: 347 NSELMGRKLRVMRSVNKEKLKQQNSNPSVKKD 378
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 28/239 (11%)
Query: 178 EKKYGVIAKEEEGKKVGVGE--KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPL 235
+KK A + G G G K++K NE E+M+ ++ RT+FVGNLP+
Sbjct: 124 QKKRASHAVTKSGGNSGAGRAVKQEKKKNEAEEMIKNK------------RTVFVGNLPV 171
Query: 236 KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQ 295
+ L F ++G+I+S+R RSV + + RK A ++++I+ N ++AY+VFK E+
Sbjct: 172 DCTAQMLKSLFKEYGQIESIRFRSVVPAEDTLSRKLAAIKRKIHPNVKYINAYVVFKEER 231
Query: 296 STEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIY 354
AL N V G HIR+D A L+D K++VF+GNL +D+ D +
Sbjct: 232 DAVKALKKNGTEVASGFHIRVDSA---------SKNSLHDNKRSVFLGNLAYDISDSAVR 282
Query: 355 QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
+ F D V AVR++R +GKG YVLF+ +A +L +K N L R+LR+
Sbjct: 283 EHFADCGD----VVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKLNNSDLMGRKLRV 337
>gi|68469607|ref|XP_721055.1| hypothetical protein CaO19.8429 [Candida albicans SC5314]
gi|68469846|ref|XP_720933.1| hypothetical protein CaO19.809 [Candida albicans SC5314]
gi|74680276|sp|Q5AHI7.1|NOP12_CANAL RecName: Full=Nucleolar protein 12
gi|46442827|gb|EAL02113.1| hypothetical protein CaO19.809 [Candida albicans SC5314]
gi|46442956|gb|EAL02241.1| hypothetical protein CaO19.8429 [Candida albicans SC5314]
Length = 454
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 23/209 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKE-----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V +I + F +G+IDS+R RS+ D +PRK A +K +++
Sbjct: 159 RTVFVGNVPADVITSKIIAKNFKNLFKHYGKIDSIRYRSISF-DEHLPRKVAFAKKNLHK 217
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AYIV+K + ++ AA N V +H+R+D P AP D K+T+F
Sbjct: 218 SRDSVNAYIVYKEKPASIAAKELNATVFEDHHLRVDHVSHP--------AP-KDNKRTIF 268
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LV 398
VGNL F+ K+E +++ F L+ VE+VR+IR +GKG A V FK + N L+
Sbjct: 269 VGNLDFEEKEETLWKYFNS--KLDQDVESVRIIRDSKTNLGKGFALVQFKDTLSVNKALL 326
Query: 399 IKRRNLKL----RDRELRLSHAQQNCTPS 423
+ + L+ + R+LR+S A+ N PS
Sbjct: 327 LNDKPLETGTQKKGRKLRISRAKSNAKPS 355
>gi|448512989|ref|XP_003866856.1| Nop12 protein [Candida orthopsilosis Co 90-125]
gi|380351194|emb|CCG21417.1| Nop12 protein [Candida orthopsilosis Co 90-125]
Length = 466
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 26/211 (12%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEFIK----FGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V KT K F K FG+IDS+R RS+ ++ +PRK + +K ++E
Sbjct: 166 RTVFVGNVPSDVITSKTTAKNFKKLFKEFGKIDSIRFRSISFGES-LPRKVSFAKKSLHE 224
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AYIVF + ++ A N V +H+R+D P AP D K+T+F
Sbjct: 225 SRDSVNAYIVFAEKSASLTAKKLNATVFENHHLRVDHVAHP--------AP-KDNKRTIF 275
Query: 341 VGNLPFDVKDEEIYQLFCGLND-LESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--L 397
VGNL F+ K+E ++ F ND L++ VE+VR+IR +GKG A V F N L
Sbjct: 276 VGNLDFEEKEESLWTYF---NDKLDNDVESVRIIRDSKTNMGKGFALVQFNDTLTVNKAL 332
Query: 398 VIKRRNLKL-----RDRELRLSHAQQNCTPS 423
++ + +K+ + R+LR+S A+ N PS
Sbjct: 333 MLNDKPMKVTSGNKKARKLRISRAKSNAKPS 363
>gi|241951268|ref|XP_002418356.1| nucleolar protein, putative [Candida dubliniensis CD36]
gi|223641695|emb|CAX43656.1| nucleolar protein, putative [Candida dubliniensis CD36]
Length = 451
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 120/209 (57%), Gaps = 23/209 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKE-----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V +I + F +G+IDS+R RS+ D +PRK A +K +++
Sbjct: 156 RTVFVGNVPADVITSKIIAKNFKNLFKHYGKIDSIRYRSISF-DENLPRKVAFAKKNLHK 214
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AYIV+K + ++ AA N AV +H+R+D P AP D K+T+F
Sbjct: 215 SRDSVNAYIVYKEKPASIAAKELNAAVFEDHHLRVDHVSHP--------AP-KDNKRTIF 265
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LV 398
VGNL F+ K+E +++ F + VE+VR+IR +GKG A V FK + N L+
Sbjct: 266 VGNLDFEEKEETLWKYFNS--KFDEDVESVRIIRDSKTNLGKGFALVQFKDTLSVNKALL 323
Query: 399 IKRRNLKL----RDRELRLSHAQQNCTPS 423
+ + L+ + R+LR+S A+ N PS
Sbjct: 324 LNDKPLESGASKKGRKLRISRAKSNAKPS 352
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 135/243 (55%), Gaps = 30/243 (12%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 1219 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 1278
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 1279 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAAMQALKRNGAHIA 1338
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+DRA + K++VFVGNLP+ V++ I + F CG S
Sbjct: 1339 DGFRIRVDRASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 1382
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 1383 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQN 1442
Query: 420 CTP 422
P
Sbjct: 1443 SNP 1445
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 119/212 (56%), Gaps = 24/212 (11%)
Query: 207 EDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK 266
E+M +K+E DD RT+FVGN+ L+ + KEF ++G+I+ + IRSVP+ ++K
Sbjct: 69 ENMTAKQKKEK-DD-----RTVFVGNISLEATGSQIAKEFKQYGKIEKIWIRSVPVENSK 122
Query: 267 IPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
+P++ +++ K+ + AD +AYI+F +++ E +L N V H+R+D+A
Sbjct: 123 MPKRASVILKKFKDGADRKNAYILFSTQEEAEKSLEANGKVFLEKHLRVDKA-------- 174
Query: 327 GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGI 384
+ + D +T+FVGNL F + +E++ F CG + VRVIR P GKG
Sbjct: 175 --NEKILDYTRTIFVGNLHFKISEEQLRHHFESCG------DILNVRVIRDPKTHEGKGF 226
Query: 385 AYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
YV FK + +++ KL +RE+R+ A
Sbjct: 227 GYVFFKEKTGFQNALEKNGTKLLEREIRVKKA 258
>gi|406608094|emb|CCH40528.1| Nucleolar protein 12 [Wickerhamomyces ciferrii]
Length = 458
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 118/202 (58%), Gaps = 25/202 (12%)
Query: 226 RTIFVGNLPLKVKK-----KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RTIF+GNL V K K L K F +FG I+S+R RS+ + IPRK A +Q++++E
Sbjct: 171 RTIFIGNLSAIVIKNKKDYKELKKYFTQFGLIESIRFRSISF-NEPIPRKAAFVQQKLHE 229
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DS++AYIVFK + + +L N V+ H+R+D P K D K+T+F
Sbjct: 230 SRDSINAYIVFKEKDAARKSLEANGKVLFDLHLRVDSVSHPSK---------IDNKRTIF 280
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK--TREAAN 396
VGNL F+ K+EE++ +F CG +E+VR++R +GKG YV FK T +
Sbjct: 281 VGNLDFEEKEEELWNIFSECG------EIESVRIVRDSTTNMGKGFGYVQFKDFTSVSKA 334
Query: 397 LVIKRRNLKLRDRELRLSHAQQ 418
L++ + L + R+LR+S +++
Sbjct: 335 LLMNEKKLGEKKRKLRISRSKR 356
>gi|299470988|emb|CBN78849.2| white-brown-complex ABC transporter family (Partial) [Ectocarpus
siliculosus]
Length = 777
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 122/231 (52%), Gaps = 26/231 (11%)
Query: 199 RKKADNETEDMLVHR--KEEGF----DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
R KA+ E D KEEG DDE K RT+FVGNLP K + F ++G +
Sbjct: 297 RGKAEAEAGDTAKASAPKEEGGNNNKDDEEKESRTVFVGNLPTSFTPKKVKAAFKEYGAV 356
Query: 253 DSVRIRSVPI--------IDTKIPRKGAILQKQINENA-DSVHAYIVFKSEQSTEAALAF 303
+SVR+RSV + D ++ RK + + ++E SV+AY+V+K S E ALA
Sbjct: 357 ESVRLRSVAVQGMAVDKAGDQQLVRKVCVNRGMVDEEVKSSVNAYVVYKDCASVEKALAA 416
Query: 304 NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG-LND 362
N +GG H+R+DRA GE YD ++VF+GNLP D +EE+ +LF L
Sbjct: 417 NGTDVGGKHVRVDRA------KSGE----YDHTRSVFLGNLPMDAGEEEVRELFASKLEG 466
Query: 363 LESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
SVE VR++R VGKG YVL R A + + KL+ R LR+
Sbjct: 467 GPKSVEGVRLVRDKATLVGKGFGYVLLADRALAAAALALQGTKLKGRPLRV 517
>gi|238882194|gb|EEQ45832.1| nucleolar protein 12 [Candida albicans WO-1]
Length = 455
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 132/240 (55%), Gaps = 29/240 (12%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE-----FIKF 249
V E+R KA T L ++ E D RT+FVGN+P V +I + F +
Sbjct: 135 VAEERTKAKVATTVDLKEKELEKAD------RTVFVGNVPADVITSKIIAKNFKNLFKHY 188
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+IDS+R RS+ D +PRK A +K ++++ DSV+AYIV+K + ++ AA N V
Sbjct: 189 GKIDSIRYRSISF-DEHLPRKVAFAKKNLHKSRDSVNAYIVYKEKPASIAAKELNATVFE 247
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+H+R+D P AP D K+T+FVGNL F+ K+E +++ F L+ VE+
Sbjct: 248 DHHLRVDHVSHP--------AP-KDNKRTIFVGNLDFEEKEETLWKYFNS--KLDQDVES 296
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL----RDRELRLSHAQQNCTPS 423
VR+IR +GKG A V FK + N L++ + L+ + R+LR+S A+ N PS
Sbjct: 297 VRIIRDSKTNLGKGFALVQFKDTLSVNKALLLNDKPLETGTQKKGRKLRISRAKSNAKPS 356
>gi|443722303|gb|ELU11225.1| hypothetical protein CAPTEDRAFT_227550 [Capitella teleta]
Length = 565
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 15/190 (7%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+F+GN+ LK +KK ++K F G I S+R RSV + K+P++ A++ K +E+ S
Sbjct: 306 RTVFIGNISLKAEKKDILKLFKGCGSIASIRFRSVTPSNPKLPKRAALITKDFHESMASF 365
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYIVFK ++S AL N H+R+D P KK +D K++VF+GNLP
Sbjct: 366 NAYIVFKEQESATKALKLNGEKFLNFHLRVDSLHPGVKK-------CHDDKRSVFLGNLP 418
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+V+++E+ F CG VE VR++R +GKG +VLFK A +L +K
Sbjct: 419 LEVQEDEVRLHFQECG------EVENVRLVRDRGTGIGKGFGFVLFKDVCAVDLALKMHE 472
Query: 404 LKLRDRELRL 413
R R+LR+
Sbjct: 473 EVFRGRKLRV 482
>gi|255724660|ref|XP_002547259.1| nucleolar protein 12 [Candida tropicalis MYA-3404]
gi|240135150|gb|EER34704.1| nucleolar protein 12 [Candida tropicalis MYA-3404]
Length = 476
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 151/283 (53%), Gaps = 38/283 (13%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHR-------- 213
K KK +D+E Y +K + +++ +K G E + D +TED R
Sbjct: 105 KSKKKDDNEDLESKYFDK--LMTENKQQDEKEGEEESKDSGDEKTEDEKSKRAKAAKTID 162
Query: 214 -KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKI 267
KE + K RT+FVGN+P K +++ K F +G+I+S+R RS+ D +
Sbjct: 163 FKEAELE---KADRTVFVGNVPSEIINSKAIERSFKKLFKHYGKIESIRYRSISF-DENL 218
Query: 268 PRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
PRK A +K ++++ DSV+AYIV+K + ++ AA N V +H+R+D P
Sbjct: 219 PRKVAFAKKNLHKSRDSVNAYIVYKEKPASLAAKELNATVFEDHHLRVDHVAHP------ 272
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
AP D KKT+FVGNL F+ K+E +++ F L++ VE+VR+IR +GKG A V
Sbjct: 273 --AP-KDNKKTIFVGNLDFEEKEESLWKYFNS--KLDNDVESVRIIRDSKTNLGKGFALV 327
Query: 388 LFKTREAAN--LVIKRRNLKL-----RDRELRLSHAQQNCTPS 423
FK + N L++ + L++ + R+LR+S A+ PS
Sbjct: 328 QFKDTLSVNKALLLNDKPLEVEGNTKKGRKLRISRAKSTAKPS 370
>gi|348538194|ref|XP_003456577.1| PREDICTED: RNA-binding protein 34-like [Oreochromis niloticus]
Length = 425
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 108/191 (56%), Gaps = 18/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KKTL F G I+S+R RSV D + RK A ++++++ S+
Sbjct: 160 RTVFVGNLPISCTKKTLRSLFRDKGSIESIRFRSVVREDPSMSRKVAAIKRKVHPKKQSI 219
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E AL N M + HIR+DR D+ +D K++VFVGNL
Sbjct: 220 NAYVVFKDEDGVTKALERNGMEMEKDFHIRVDRVT---------DSSSHDHKRSVFVGNL 270
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
FD+ + + F CG +VEAVR++R + +GKG YVLF++ ++ L +K
Sbjct: 271 SFDINELTFRRHFEECG------TVEAVRLVRDKNSGLGKGFGYVLFESTDSVQLALKLD 324
Query: 403 NLKLRDRELRL 413
KL R +R+
Sbjct: 325 GSKLEGRSIRV 335
>gi|351694564|gb|EHA97482.1| RNA-binding protein 34 [Heterocephalus glaber]
Length = 428
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 23/209 (11%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
V+++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 172 VNQEEERLKNE----RTLFVGNLPITCNKKKLKSFFKEYGQIESVRFRSLIPAEGTVSKK 227
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK E + AL N A I G IR+D A +
Sbjct: 228 LAAIKRKIHPDQKNINAYVVFKEESAATKALKRNGAQIADGFRIRVDLASETSSR----- 282
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VF+GNLP+ V++ + + F CG S+ AVR++R P VGKG YV
Sbjct: 283 -----DKRSVFIGNLPYKVEETAVEEHFLDCG------SIVAVRIVRDPVTGVGKGFGYV 331
Query: 388 LFKTREAANLVIKRRNLKLRDRELRLSHA 416
LF+ +A +L +K N +L R+LR+ H+
Sbjct: 332 LFENTDAVHLALKLNNSELMGRKLRVMHS 360
>gi|354546721|emb|CCE43453.1| hypothetical protein CPAR2_210970 [Candida parapsilosis]
Length = 473
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 115/215 (53%), Gaps = 34/215 (15%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEFIK----FGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT FVGN+P V KT+ K F K FG+IDS+R RS+ D +PRK + +K ++
Sbjct: 172 RTAFVGNVPSDVITSKTVAKNFKKLFKQFGKIDSIRFRSISF-DENLPRKVSFAKKSLHN 230
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AY+VF + S+ AA N V +H+R+D P AP D K+T+F
Sbjct: 231 SRDSVNAYVVFVEKSSSLAAKKLNAIVFENHHLRVDHVAHP--------AP-KDNKRTIF 281
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
VGNL F+ K+E ++ F N L++ VE+VR+IR +GKG A V F N
Sbjct: 282 VGNLDFEEKEESLWNYFN--NKLDNDVESVRIIRDSKTNMGKGFALVQFNDTLTVN---- 335
Query: 401 RRNLKLRD------------RELRLSHAQQNCTPS 423
R L L D R+LR+S A+ N PS
Sbjct: 336 -RALMLNDKPMDVTSGNKKARKLRISRAKANVKPS 369
>gi|430813955|emb|CCJ28747.1| unnamed protein product [Pneumocystis jirovecii]
Length = 364
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 118/199 (59%), Gaps = 28/199 (14%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIK----EFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
DD K L TIFVGNLP+ V K++ K +F++FG+I S+R RS+ T +P+K A
Sbjct: 108 DDFEKALCTIFVGNLPISVVSSKSVYKNFKTKFLEFGKIKSIRFRSIAF-STFLPKKIAY 166
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
+QK+ + D ++AYIV+++++S++ ALA N V H+R+D P AP +
Sbjct: 167 IQKKFHTKRDLLNAYIVYETQESSKNALALNGVVFLDRHLRVDSVAYP--------AP-H 217
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
K+++F+GNL FD ++E+++ F CG +E VR++R +GKG AYV FK
Sbjct: 218 VPKRSIFIGNLSFDAQEEQLWSYFAHCG------EIEFVRIVRDNKTNLGKGFAYVQFKD 271
Query: 392 REAANLVIKRRNLKLRDRE 410
RE+ + + L L D+E
Sbjct: 272 RESID-----QALLLHDKE 285
>gi|412993493|emb|CCO14004.1| predicted protein [Bathycoccus prasinos]
Length = 447
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 163/360 (45%), Gaps = 73/360 (20%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKF-------------------GEIDSVRIRSVPII- 263
L RT+FVGN+P K K K L+ F + E+ S RIRSVP+
Sbjct: 90 LKRTMFVGNVPTKTKAKELVSFFKEMLLSSSSSSSKSEKKTKKTKAEVVSARIRSVPLKK 149
Query: 264 -----DTKIPRKGAIL-----QKQINENADSVH--------AYIVFKSEQSTEAALA-FN 304
D K+P + IL +K+ EN+ S++ AY+V+K E+ E A+ N
Sbjct: 150 SADEKDAKVPVRAKILGSLGKRKKDTENSGSINEASKSGCTAYVVWKREKDCERAVKKGN 209
Query: 305 MAVIGGNHIRLDRACPPRKKLKGEDAP-----LYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
M G+ +R+D A + KG YD K+VF+GNLPFDV DEE+ ++F
Sbjct: 210 MQKFNGHTLRVDFAAKSSQTTKGGKGDDGSGVTYDRTKSVFIGNLPFDVSDEEVIEIFTK 269
Query: 360 ---LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
+L++ +EAVRV+R R GKGIA+VLFK+ +AA + ++ RELR++
Sbjct: 270 NKEYKELKTELEAVRVVRDKATRTGKGIAFVLFKSVKAARTALLLDGFEMGKRELRVTKV 329
Query: 417 ------QQNCTPSKRKDVAPAVNSPPKKFVLDS-------------RTLGSGNRSNSKVA 457
+ N R+ A N+ KK + R + S S
Sbjct: 330 GVVAPKRGNEVTKSRERGGKASNNFSKKDTKNGSHENNNNNANNNKRKINSWEGGRSAKG 389
Query: 458 MSYQGLQASKSCTQKKVHSG---SSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKA 514
+ KS T + G S+ V KK R K KRPAVALRKA+ KA
Sbjct: 390 NKAAKFEKKKSPTASALGDGKGKSAAFVGAKKKRASSSAGGK----KRPAVALRKAKMKA 445
>gi|327262180|ref|XP_003215903.1| PREDICTED: RNA-binding protein 34-like [Anolis carolinensis]
Length = 377
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 20/192 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS-VPIIDTKIPRKGAILQKQINENADS 284
RT+FVGNLP+ ++ L F ++G+I+S+R RS +P DT + +K A ++++ + N
Sbjct: 133 RTVFVGNLPVSCTEQMLKAFFREYGQIESIRFRSLIPSEDT-LSKKLAAIKRKFHPNRKY 191
Query: 285 VHAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
++AYIVFK E + AL N G HIR+D A + +D K++VFVGN
Sbjct: 192 INAYIVFKEEHAANDALKCNGTEFCSGFHIRVDLA---------SKSTCHDNKRSVFVGN 242
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
LP+ + D+ + F CG +V VR++R +GKG YVLF+T +A +L +K
Sbjct: 243 LPYAIDDDTVRTHFSQCG------NVMGVRIVRDQRTGIGKGFGYVLFETTDAVHLALKL 296
Query: 402 RNLKLRDRELRL 413
N +L R+LR+
Sbjct: 297 NNAELEGRKLRV 308
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 131/237 (55%), Gaps = 29/237 (12%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK D+ + ++ RK+ + E + L RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 155 RKILDDIDDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTFNKKKLKSFFKEYGQIESV 214
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I G IR
Sbjct: 215 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 274
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D AC + K++VFVGNLP+ V++ + + F CG S+ AVR+
Sbjct: 275 VDLACETSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------SILAVRI 318
Query: 373 IRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQNCTP 422
+R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN P
Sbjct: 319 VRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNP 375
>gi|354468817|ref|XP_003496847.1| PREDICTED: RNA-binding protein 34-like [Cricetulus griseus]
Length = 425
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 112/191 (58%), Gaps = 19/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RSV + + +K A ++++ + + S+
Sbjct: 183 RTVFVGNLPVTCNKKKLKSLFKEYGQIESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 242
Query: 286 HAYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D A + K++VFVGNL
Sbjct: 243 NAYVVFKDESAATKALQRNGAQIEEGFRIRVDLASETTSR----------DKRSVFVGNL 292
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ V++ + + F CG S+ AVR++R+P VG+G YVLF+ +A +L +K
Sbjct: 293 PYKVEEAALEEHFLDCG------SIVAVRILRNPQTGVGRGFGYVLFENTDAVHLALKLN 346
Query: 403 NLKLRDRELRL 413
N +L R+LR+
Sbjct: 347 NSELMGRKLRV 357
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 30/243 (12%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 144 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 203
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 204 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 263
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 264 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 307
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 308 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKFKQQN 367
Query: 420 CTP 422
P
Sbjct: 368 SNP 370
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 30/243 (12%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 149 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 208
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 209 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 268
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 269 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 312
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 313 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKFKQQN 372
Query: 420 CTP 422
P
Sbjct: 373 SNP 375
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 30/243 (12%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 144 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 203
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 204 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 263
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 264 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 307
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 308 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKFKQQN 367
Query: 420 CTP 422
P
Sbjct: 368 SNP 370
>gi|417410496|gb|JAA51720.1| Putative splicing factor, partial [Desmodus rotundus]
Length = 412
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 55/316 (17%)
Query: 162 KKTKKRKRDDVEKD--YVEKKYGVIAKEEEGKKVGVGEKRKK------------------ 201
KK K +K D EK Y E EEE G+KRK
Sbjct: 88 KKVKVKKLSDAEKQLAYRENALASADLEEEETHQKQGQKRKMSQPGVKAADKQVLDDVDY 147
Query: 202 -ADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV 260
A N+ + + ++ +EE +E RT+FVGNLP+ KK L F ++G I+SVR RSV
Sbjct: 148 PAVNQRKKIQINPEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGPIESVRFRSV 203
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRAC 319
+ + +K A+++++I+ + +++AY+VFK E++ AL N A I G +R+D A
Sbjct: 204 IPAEGTMSKKLAVIKRKIHPDQKNINAYVVFKDERAATKALNRNGAQIADGFRVRVDLAS 263
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPH 377
+ K++VFVGNLP+ V + + F CG ++ AVR++R P
Sbjct: 264 ETSSR----------DKRSVFVGNLPYKVGESAVEHHFLDCG------NIVAVRIVRDPL 307
Query: 378 MRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA------QQNCTPSKRKDVAPA 431
VG+G YVLF+ +A +L +K N +L R+LR+ + +QN P+ +
Sbjct: 308 TGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQNSNPNLKN----- 362
Query: 432 VNSPPKKFVLDSRTLG 447
+ P K F S+ +G
Sbjct: 363 ASKPKKGFDFASKNVG 378
>gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|26346951|dbj|BAC37124.1| unnamed protein product [Mus musculus]
Length = 375
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 19/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+++SVR RSV + + +K A ++++ + + S+
Sbjct: 189 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 248
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D A + K++VFVGNL
Sbjct: 249 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASR----------DKRSVFVGNL 298
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ ++D + + F CG S+ AVR++R+P VG+G YVLF+ +A +L +K
Sbjct: 299 PYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 352
Query: 403 NLKLRDRELRL 413
N +L R+LR+
Sbjct: 353 NSELMGRKLRV 363
>gi|194042563|ref|XP_001925470.1| PREDICTED: RNA-binding protein 34 [Sus scrofa]
Length = 424
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 25/206 (12%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K A ++++I+ + ++
Sbjct: 181 RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNI 240
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D A + K++VFVGNL
Sbjct: 241 NAYVVFKDESAAAKALERNGAQIADGFRIRVDLASETSSR----------DKRSVFVGNL 290
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ V++ + + F CG SV AVR++R P VG+G YVLF+ +A +L +K
Sbjct: 291 PYKVEESAVEKHFLDCG------SVVAVRIVRDPVTGVGRGFGYVLFENTDAVHLALKLN 344
Query: 403 NLKLRDRELRLSHA------QQNCTP 422
N +L R+LR+ + +QN P
Sbjct: 345 NSELMGRKLRVMRSIHKEKLKQNSNP 370
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 30/243 (12%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 178 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 237
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 238 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 297
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ I + F CG S
Sbjct: 298 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAIEKHFLDCG------S 341
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 342 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKFKQQN 401
Query: 420 CTP 422
P
Sbjct: 402 SNP 404
>gi|330801407|ref|XP_003288719.1| hypothetical protein DICPUDRAFT_79507 [Dictyostelium purpureum]
gi|325081234|gb|EGC34757.1| hypothetical protein DICPUDRAFT_79507 [Dictyostelium purpureum]
Length = 475
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 13/196 (6%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
RT+FV N+ L+ +K + +FI+FG+I+SVR RS+PI RK ++KQ +E D+
Sbjct: 265 RTVFVSNIKLENANEKDIKSKFIEFGKIESVRFRSIPISSIDANRKETFIKKQFHEKRDT 324
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+AYIVF +E S + A+ + N + G HIR+D A K K DA K VFVGN
Sbjct: 325 CNAYIVFDTEASAKKAVDSMNGKELFGKHIRVDLAS--HKPSKDSDA------KCVFVGN 376
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+P+++++EE++ N V +VR++R H +GKG YV F T +AA I +
Sbjct: 377 VPYEIEEEELFL---LFNTTFGEVLSVRIVRDQHSNIGKGFGYVNFNTEKAATTAIDAKT 433
Query: 404 LKLRDRELRLSHAQQN 419
LKL +RE+R+ +QN
Sbjct: 434 LKLGNREIRIFPTKQN 449
>gi|66804529|ref|XP_635997.1| hypothetical protein DDB_G0289941 [Dictyostelium discoideum AX4]
gi|60464334|gb|EAL62483.1| hypothetical protein DDB_G0289941 [Dictyostelium discoideum AX4]
Length = 481
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 13/196 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIK-FGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
RT+FV N+ L K +K+ K FG+I+S+R RS+P+ RK ++K+ +E ++
Sbjct: 257 RTVFVSNINLNHAKDNELKQLFKPFGQIESIRFRSIPLSSIDGNRKETFIKKEFHEKRET 316
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+AYIVFK + +AA N G H+R+D A K K DA KT+F+GN
Sbjct: 317 CNAYIVFKQIADAKKAAKQMNGKEAFGKHLRVDMA--DHKPTKASDA------KTIFIGN 368
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+P++ ++EE++ +F + V +VR+IR H +GKG YV F T E A+ I +++
Sbjct: 369 IPYETEEEELFLIF---DKTFGDVVSVRIIRDSHTNIGKGFGYVNFSTDETASTAIAQKS 425
Query: 404 LKLRDRELRLSHAQQN 419
++ RE+R+ ++N
Sbjct: 426 IQFGKREIRIFPTKEN 441
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 136/253 (53%), Gaps = 34/253 (13%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 172 NQRKKIEINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 227
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N G +R+D A
Sbjct: 228 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGTQFADGFRVRVDLASETS 287
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ I + F CG S+ AVR++R P V
Sbjct: 288 SR----------DKRSVFVGNLPYKVEESAIEEHFLDCG------SIVAVRIVRDPATGV 331
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA------QQNCTPSKRKDVAPAVNS 434
G+G YVLF+ +A +L +K N +L R+LR+ + + N PS + V
Sbjct: 332 GRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKPNSNPSSKN-----VGK 386
Query: 435 PPKKFVLDSRTLG 447
P + DS+ +G
Sbjct: 387 PKQGLHFDSKNVG 399
>gi|432106224|gb|ELK32110.1| AT-rich interactive domain-containing protein 4B [Myotis davidii]
Length = 1743
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 137/261 (52%), Gaps = 33/261 (12%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK +E + + RK+ + E + L RT+FVGNLP+ KK L F ++G I+SV
Sbjct: 1470 RKTLGDEDDTAVSQRKKTQMNPEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGPIESV 1529
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RSV + + +K A ++++I+ + +++AY+VFK E + AL N I G +R
Sbjct: 1530 RFRSVIPAEGTMSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALNRNGTQIADGFRVR 1589
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A + K++VFVGNLP+ ++D + F CG ++ AVR+
Sbjct: 1590 VDLASETSSR----------DKRSVFVGNLPYKIEDAVVEDHFLDCG------NIVAVRI 1633
Query: 373 IRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA------QQNCTPSKRK 426
+R P VG+G YVLF+ +A +L +K N +L R+LR+ + +QN PS +
Sbjct: 1634 VRDPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKDKLKQNSNPSLKN 1693
Query: 427 DVAPAVNSPPKKFVLDSRTLG 447
V+ P K S+ +G
Sbjct: 1694 -----VSKPKKGLNFASKNVG 1709
>gi|291220976|ref|XP_002730499.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 458
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 112/190 (58%), Gaps = 17/190 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+F+GNLP+ + KK L K F K+G+I+SVR+RS +P+K ++++ + + ++
Sbjct: 181 RTVFIGNLPVDISKKELTKLFKKYGDIESVRLRSAAPSTLALPKKVVMIKEDFHPDRKNL 240
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+V+K E S +L N V+ G+HIR+D + +A +D +++VF+GNLP
Sbjct: 241 NAYVVYKEEISALKSLKKNGKVVRGHHIRVDVSS---------NASKHDHQRSVFIGNLP 291
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+ + +E + Q F CG +V +VR++R +GKG YVLFK + +K +
Sbjct: 292 YKIDEEIVRQHFMQCG------NVISVRLVRDGKTGIGKGFGYVLFKDISSVEFALKFND 345
Query: 404 LKLRDRELRL 413
L R++R+
Sbjct: 346 KPLFGRKVRI 355
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 29/237 (12%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK D+ + ++ RK+ ++E + L RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 1542 RKILDDVDDTVVSQRKKIQINEEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESV 1601
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I G IR
Sbjct: 1602 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 1661
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A + K++VFVGNLP+ V + + + F CG SV AVR+
Sbjct: 1662 VDLASETSSR----------DKRSVFVGNLPYKVAESAVEKHFLDCG------SVMAVRI 1705
Query: 373 IRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQNCTP 422
+R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN P
Sbjct: 1706 VRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNP 1762
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 141/266 (53%), Gaps = 35/266 (13%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++ ED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 149 GVKVADRKILDDIEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 208
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 209 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 268
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ + + F CG S
Sbjct: 269 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------S 312
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 313 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQN 372
Query: 420 CTPSKRKDVAPAVNSPPKKFVLDSRT 445
P + V+ P + SRT
Sbjct: 373 SNPRLKN-----VSKPKQGLNFTSRT 393
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 30/222 (13%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 1559 INQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKK 1614
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK E + AL N A I G IR+D A +
Sbjct: 1615 LAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSR----- 1669
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG S+ AVR++R +GKG YV
Sbjct: 1670 -----DKRSVFVGNLPYKVEESAVEKHFLDCG------SIMAVRIVRDKMTGIGKGFGYV 1718
Query: 388 LFKTREAANLVIKRRNLKLRDRELRLSHA-------QQNCTP 422
LF+ ++ +L +K N +L R+LR+ + QQN P
Sbjct: 1719 LFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNP 1760
>gi|324507077|gb|ADY43007.1| RNA-binding protein 34 [Ascaris suum]
Length = 376
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 19/225 (8%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G +RK A ET+ + +KE+ +E + RTIFVGN P +K++ K F K+G I+SV
Sbjct: 99 GTQRKHASRETQRLNRVKKEKMTAEEKE--RTIFVGNAPTSATRKSIKKLFSKYGTIESV 156
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+RSV + K+ +K A+L+ ++ S+H Y+ F + S +AAL N + + +R+
Sbjct: 157 RLRSVVSDNAKLSKKIAVLKNDLSPKMHSLHFYVKFINADSVKAALDMNGEKLDDHRLRV 216
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVI 373
D +C ++ YD +KTVF+GN+PF +++++ F CG V+ VR++
Sbjct: 217 D-SCASKRN--------YDSQKTVFIGNVPFGTQEDDLCAHFEKCG------DVDFVRIV 261
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQ 418
R +GKGIA+V FK + +K R+LR++ Q+
Sbjct: 262 RDRATGIGKGIAFVAFKETAVIPIALKMDGSDFGGRQLRVTRIQK 306
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 29/237 (12%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
RK D+ + ++ RK+ ++E + L RT+FVGNLP+ KK L F ++G+I+SV
Sbjct: 155 RKILDDVDDTVISQRKKIQINEEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESV 214
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIR 314
R RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I G IR
Sbjct: 215 RFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIADGFRIR 274
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D A + K++VFVGNLP+ V + + + F CG SV AVR+
Sbjct: 275 VDLASETSSR----------DKRSVFVGNLPYKVAESAVEKHFLDCG------SVMAVRI 318
Query: 373 IRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQNCTP 422
+R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN P
Sbjct: 319 VRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNP 375
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 133/243 (54%), Gaps = 30/243 (12%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++ ED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 178 GVKVADRKILDDIEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 237
Query: 250 GEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG 309
G+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK E + AL N A I
Sbjct: 238 GQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALKRNGAQIA 297
Query: 310 -GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
G IR+D A + K++VFVGNLP+ V++ + + F CG S
Sbjct: 298 DGFRIRVDLASETSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------S 341
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQN 419
+ AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + QQN
Sbjct: 342 IMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQQN 401
Query: 420 CTP 422
P
Sbjct: 402 SNP 404
>gi|345798762|ref|XP_536341.3| PREDICTED: RNA-binding protein 34 [Canis lupus familiaris]
Length = 428
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 122/213 (57%), Gaps = 23/213 (10%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+IDSVR RS+
Sbjct: 166 NQRKKIEINQEEEKLKNE----RTVFVGNLPVTCNKKKLKSFFREYGQIDSVRFRSLIPA 221
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + ++AY+VFK E S AL N A I G IR+D A
Sbjct: 222 EGTLSKKLAAIKRKIHPDQKYINAYVVFKDESSATKALKRNGAQIADGFRIRVDLASETS 281
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ + + F CG S+ AVR++R V
Sbjct: 282 SR----------DKRSVFVGNLPYKVEESAVEEHFLDCG------SIVAVRIVRDRVTGV 325
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G+G YVLF+ +A +L +K N +L R+LR+
Sbjct: 326 GRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 358
>gi|344278331|ref|XP_003410948.1| PREDICTED: RNA-binding protein 34 [Loxodonta africana]
Length = 433
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 127/229 (55%), Gaps = 30/229 (13%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + V+++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 170 NQRKKIQVNQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 225
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N I G IR+D A
Sbjct: 226 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGTQIADGFRIRVDLASETS 285
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ +++ + + F CG SV AVR++R V
Sbjct: 286 SR----------DKRSVFVGNLPYKIEESMVEKHFLDCG------SVVAVRIVRDQVTGV 329
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQNCTP 422
GKG YVLF+ +A +L +K N +L R+LR+ + QQN P
Sbjct: 330 GKGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNP 378
>gi|410917640|ref|XP_003972294.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 399
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 135/275 (49%), Gaps = 40/275 (14%)
Query: 213 RKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
RKEE + K RT+FVGNLP KKTL F G I+S+R RSV D + RK A
Sbjct: 137 RKEE---EAQKRKRTVFVGNLPSSCSKKTLQNLFRDEGSIESIRFRSVVREDPSMSRKVA 193
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGN-HIRLDRACPPRKKLKGEDAP 331
+++++I+ S++AY+VFK E AL N I + +IR+D+
Sbjct: 194 VIKRKIHPKKQSMNAYVVFKDEGGVTRALERNGLEIEKDFYIRVDKVV---------KNS 244
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+D K++VFVGNL FD+ + F CG SVEAVR++R + +GKG Y+LF
Sbjct: 245 SHDHKRSVFVGNLSFDINELAFRHHFEDCG------SVEAVRLVRDQNSGLGKGFGYILF 298
Query: 390 KTREAANLVIKRRNLKLRDRELRLSHA---QQNCTPSKRKDVAPAVN--------SPPKK 438
K+ +A L +K KL+ R +R+ + +N R PA PKK
Sbjct: 299 KSADAVQLALKLDGSKLQGRRIRVRRSLKESENKGAKGRFGKGPAPERERHQGRIGSPKK 358
Query: 439 FVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKK 473
F RT SK+ S+ G++ + KK
Sbjct: 359 FSRQQRT--------SKIYTSFSGIKVDPNVKTKK 385
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 16/190 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFVGNLP V KK L K F +FG+ID++R+R + ++ A ++ +++ SV
Sbjct: 348 RTIFVGNLPKDVTKKKLRKLFKQFGKIDTIRLRGKIAKSVNVSKRVAAIKNELHPKLKSV 407
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F S++S + +L+ N GN++R++ + K +D KK++F+GNL
Sbjct: 408 YAYIKFVSKESVKESLSINGTEFEGNYLRVNASNKSENK--------FDSKKSIFLGNLH 459
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+++ D I + F CG +E+VRV+R VGKG YV FK +A L ++
Sbjct: 460 YNIDDNTIIKHFKQCG------EIESVRVVRDNKTGVGKGFGYVNFKNEDAVTLALELDG 513
Query: 404 LKLRDRELRL 413
+ +RE+R+
Sbjct: 514 TTISNREVRV 523
>gi|395531593|ref|XP_003767862.1| PREDICTED: RNA-binding protein 34 [Sarcophilus harrisii]
Length = 438
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 19/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KKK L F ++G+I+ VR RS+ + + +K A ++++++ S+
Sbjct: 192 RTVFVGNLPVTCKKKELKSFFKEYGQIECVRFRSLIPAKSNLSKKIAAIKREVHPEQKSI 251
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ Y+VFK E + E AL N A I G IR++ D PL K++VFVGNL
Sbjct: 252 NGYVVFKEESAAEKALKRNGAQIAEGFPIRVELI---------SDTPLRS-KRSVFVGNL 301
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ +++ I + F CG SV AV+++R+ +GKG YVLF+ +A L +K
Sbjct: 302 PYKIEETAIQEHFSDCG------SVLAVKLVRNKVTGIGKGCGYVLFENTDAVQLALKLN 355
Query: 403 NLKLRDRELRL 413
N +L R+LR+
Sbjct: 356 NSELMGRKLRV 366
>gi|224047848|ref|XP_002191823.1| PREDICTED: RNA-binding protein 34 [Taeniopygia guttata]
Length = 428
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 111/194 (57%), Gaps = 20/194 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS-VPIIDTKIPRKGAILQKQINENADS 284
RT+FVGNLP+ + L F K+G I S+R RS +P DT + +K A ++ +++ NA S
Sbjct: 173 RTVFVGNLPVSCTIQVLTSLFKKYGRIQSIRFRSLIPAEDT-VSKKVAAIKHKVHPNAKS 231
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
V+AY+VFK E + AL N I G HIR+D A L+D K++VFVGN
Sbjct: 232 VNAYVVFKEECDAQNALKENGTEIASGFHIRVDTAS---------KTSLHDNKRSVFVGN 282
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
L +D++D+ + + F CG + VRV+R +GKG YVLF+ +A +L +K
Sbjct: 283 LSYDIRDDAVREHFQVCG------DIVGVRVVRDRRTGLGKGFGYVLFENTDAVHLALKL 336
Query: 402 RNLKLRDRELRLSH 415
N L R++R+ H
Sbjct: 337 NNSVLMGRKIRVQH 350
>gi|301111538|ref|XP_002904848.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262095178|gb|EEY53230.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 382
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 107/207 (51%), Gaps = 26/207 (12%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-------A 272
DE K RT+FVGN+ L +K + K F G+++SVR+R +PI + G
Sbjct: 68 DELKERRTVFVGNVSLDATQKDIKKHFSVCGQVESVRLRHLPIAGCAVGDAGNQKLMMKV 127
Query: 273 ILQKQINENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
K+I A D+ +AY+ F E S EAA+ N + IR+DR P
Sbjct: 128 CANKKILTTAKDNCNAYVTFVEESSAEAAIKLNGTTLVQMKIRVDRC-----------EP 176
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS-----VEAVRVIRHPHMRVGKGIAY 386
+ D +++VF+GN+PF DE+I+Q F L L+S +E VR+IR +GKG Y
Sbjct: 177 VIDARRSVFIGNVPFKCTDEQIFQFF--LKRLKSDDEPEPIENVRLIRDRESGLGKGFGY 234
Query: 387 VLFKTREAANLVIKRRNLKLRDRELRL 413
+L KT + RNLK+ RELR+
Sbjct: 235 LLLKTPALVAKTLTLRNLKMETRELRV 261
>gi|213402043|ref|XP_002171794.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|211999841|gb|EEB05501.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 437
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 118/205 (57%), Gaps = 27/205 (13%)
Query: 226 RTIFVGNLPLKV---KK--KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FV NLP K+ KK K+L K F ++G++ SVR RS+ + IPRK A ++K+ ++
Sbjct: 178 RTVFVNNLPAKIVTDKKLTKSLKKHFSQYGKVQSVRFRSIAFSEV-IPRKAAFIEKKFHD 236
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
DSV+AY+VF++ ++ A+ N + H+R+D P AP + K+ VF
Sbjct: 237 ERDSVNAYVVFETSKAAREAVKLNGTMFLNRHLRVDHISHP--------APQVN-KRCVF 287
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VGNL F+ ++E ++ F CG VE VR+IR P +GKG AYV F++ E+ +
Sbjct: 288 VGNLAFEAEEEPLWCYFEPCG------PVEYVRIIRDPKTNLGKGFAYVQFQSAESVDKA 341
Query: 399 IKRRNLKLRD-RELRLSH---AQQN 419
+ K+ + R LR+S A+QN
Sbjct: 342 LLLNGKKMPEGRTLRVSRCKVAKQN 366
>gi|189237665|ref|XP_001812360.1| PREDICTED: similar to RNA binding motif protein 34 [Tribolium
castaneum]
gi|270007816|gb|EFA04264.1| hypothetical protein TcasGA2_TC014554 [Tribolium castaneum]
Length = 369
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L RT+F+GNLP+ K + + F K+G ++SVRIR VP+ D K+P+K A+++++ + +
Sbjct: 109 LSRTVFIGNLPISSNTKQIKQFFKKYGNVESVRIRGVPVADPKLPKKVAMIKREFHPDRK 168
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
H YI F+S + + + +H+R+ C +++P D K +FVGN
Sbjct: 169 GFHGYIRFESRDDAIKSTEADGVLFQEHHLRV---C----MCDAKESP--DEDKAIFVGN 219
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
L F +++++++ F CG + +VR++R +GKG +V FK ++ L ++
Sbjct: 220 LSFYAEEDDLWKTFESCG------PIASVRIVRDGKTGIGKGFGFVNFKNSDSVTLALEM 273
Query: 402 RNLKLRDRELRL 413
N+ L+DRELR+
Sbjct: 274 ENVTLKDRELRI 285
>gi|241622203|ref|XP_002408913.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215503069|gb|EEC12563.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 266
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 116/218 (53%), Gaps = 36/218 (16%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEG--KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
R+ A ++ D + ++ F E K RTIFVGNLP+ +K L + F ++G I+SVR
Sbjct: 37 REVAPDDVADAEAPKPQKNFPPESPDKEARTIFVGNLPVTASEKPLRRFFNQYGAIESVR 96
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD 316
RS ++ + +V+AY+VFK ++S + AL N +++ GNHIR+D
Sbjct: 97 FRS-----------------SLHSSKQNVNAYVVFKQKESVDKALVANGSLLLGNHIRVD 139
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIR 374
R KK P D +K+VFVGNLP +V+DEE++ F CG V VRVIR
Sbjct: 140 RVG---KK------PQVDDRKSVFVGNLPHEVQDEELWNCFSECG------QVTGVRVIR 184
Query: 375 HPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELR 412
+GKG +V F +AA L ++ + + R +R
Sbjct: 185 DRETGMGKGFGFVTFSKLDAAALALEMSGIHMSGRPIR 222
>gi|167531199|ref|XP_001748165.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773285|gb|EDQ86926.1| predicted protein [Monosiga brevicollis MX1]
Length = 454
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 37/212 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI----LQKQINEN 281
RTIFVGNLP VK K L + F GEI+S+R+R+V + A L+K++
Sbjct: 103 RTIFVGNLPATVKAKALKELFADCGEIESIRLRTVVRCCCPLAVSPAYADPALRKRLASE 162
Query: 282 ADSVHAYIVFKSEQSTEAALAF--------------NMAVIGGNHIRLDRACPPRKKLKG 327
S++AY+VF ++ + AL N G+H+R+ RA
Sbjct: 163 QSSMNAYVVFTADAAVTQALTLFSPGMPLADIWTFSNGVEFQGHHLRVTRA--------- 213
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIA 385
+ +D+ +++FVGNLPFD +EE++ F CG +VE VR++R +GKG A
Sbjct: 214 -ETKTFDLHRSIFVGNLPFDASEEELHGAFDSCG------TVEGVRIVRDKKYAIGKGFA 266
Query: 386 YVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
YVLF+ E+ L + + ++R R LR+S +
Sbjct: 267 YVLFELAESVGLALM-KECQVRGRTLRVSRCR 297
>gi|149248228|ref|XP_001528501.1| hypothetical protein LELG_01021 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448455|gb|EDK42843.1| hypothetical protein LELG_01021 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 452
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 113/184 (61%), Gaps = 18/184 (9%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKF----GEIDSVRIRSVPIIDTKIPRKGAI 273
+D+G+ RT+FVGN+P +V K++ K F + G+IDS+R RS+ D ++P+K +
Sbjct: 166 EDDGRNDRTVFVGNVPNQVITSKSVAKSFKRLFKEHGKIDSIRFRSIAFSD-QLPKKVSY 224
Query: 274 LQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
++K ++E+ DSV+AY+VF + + S +AA A N V +H+R+D GE AP
Sbjct: 225 VKKNLHESRDSVNAYVVFVEPKDSLKAAKALNATVFEDHHLRVDHV--------GEPAP- 275
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
D K+T+FVGNL F+ K+E +++ F L+ VE+VR++R +GKG A V FK
Sbjct: 276 KDNKRTIFVGNLDFEEKEENLWKFFN--EKLDGDVESVRIVRDSVTNMGKGFALVQFKDS 333
Query: 393 EAAN 396
+ N
Sbjct: 334 LSVN 337
>gi|281341646|gb|EFB17230.1| hypothetical protein PANDA_016323 [Ailuropoda melanoleuca]
Length = 428
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 124/213 (58%), Gaps = 23/213 (10%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE ++ RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIEINQEEERLKNQ----RTVFVGNLPVTCNKKKLKSFFREYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A I G IR+D A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGAQIADGFRIRVDLAS--- 279
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
D D K++VFVGNLP+ V++ + + F CG S+ AVR++R V
Sbjct: 280 ------DTSSRD-KRSVFVGNLPYKVEESAVEEHFLDCG------SIVAVRIVRDRVTGV 326
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G+G YVLF+ +A +L +K N +L R+LR+
Sbjct: 327 GRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 359
>gi|301782455|ref|XP_002926642.1| PREDICTED: RNA-binding protein 34-like [Ailuropoda melanoleuca]
Length = 430
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 124/213 (58%), Gaps = 23/213 (10%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE ++ RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 169 NQRKKIEINQEEERLKNQ----RTVFVGNLPVTCNKKKLKSFFREYGQIESVRFRSLIPA 224
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A I G IR+D A
Sbjct: 225 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALKRNGAQIADGFRIRVDLAS--- 281
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
D D K++VFVGNLP+ V++ + + F CG S+ AVR++R V
Sbjct: 282 ------DTSSRD-KRSVFVGNLPYKVEESAVEEHFLDCG------SIVAVRIVRDRVTGV 328
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G+G YVLF+ +A +L +K N +L R+LR+
Sbjct: 329 GRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 361
>gi|348575610|ref|XP_003473581.1| PREDICTED: RNA-binding protein 34-like [Cavia porcellus]
Length = 430
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 121/206 (58%), Gaps = 23/206 (11%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 173 INQEEERLKNE----RTVFVGNLPVTYNKKKLKSFFKEYGQIESVRFRSLIPAEGTVSKK 228
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK+E + AL N A I G HIR+D A +
Sbjct: 229 LAAIKRKIHPDQKNINAYVVFKNESAATKALKSNGAEIADGFHIRVDLASKSSSR----- 283
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG S+ AVR++R VGKG YV
Sbjct: 284 -----DKRSVFVGNLPYKVEETAVKEHFLDCG------SIVAVRLVRDRVTGVGKGFGYV 332
Query: 388 LFKTREAANLVIKRRNLKLRDRELRL 413
LF+ +A +L +K N +L R+LR+
Sbjct: 333 LFENTDAVHLALKLNNSELMGRKLRV 358
>gi|334322146|ref|XP_001378610.2| PREDICTED: RNA-binding protein 34-like [Monodelphis domestica]
Length = 510
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 111/191 (58%), Gaps = 19/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KKK L F ++G+I+ VR RS+ + + +K A ++++++ S+
Sbjct: 173 RTVFVGNLPVTCKKKELKSFFKEYGQIECVRFRSLIPAKSTLSKKIAAIKREVHPEQKSI 232
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ Y+VFK E + E AL N A I G +R++ D PL K++VFVGNL
Sbjct: 233 NGYVVFKEESAAEKALKRNGAQIAEGFPVRVELI---------SDTPLRG-KRSVFVGNL 282
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ +++ I + F CG SV AV+++R+ VGKG YVLF+ +A L ++
Sbjct: 283 PYKIEEAAIQEHFSDCG------SVLAVKIVRNKVTGVGKGCGYVLFENTDAVQLALRLN 336
Query: 403 NLKLRDRELRL 413
N +L R+LR+
Sbjct: 337 NSELMGRKLRV 347
>gi|194206109|ref|XP_001915106.1| PREDICTED: RNA-binding protein 34 [Equus caballus]
Length = 428
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 128/238 (53%), Gaps = 28/238 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RS+ + +K A +++ I+ N ++
Sbjct: 185 RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTRSKKLAAIKRTIHPNQKNI 244
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK + + AL N A I G IR+D A + K++VFVGNL
Sbjct: 245 NAYVVFKDDSAAAKALKRNGAQIADGFRIRVDLASETSSR----------DKRSVFVGNL 294
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ V++ + + F CG + AVR++R VG+G YVLF+ +A +L +K
Sbjct: 295 PYKVEESAVEEHFLDCG------HIVAVRIVRDQVTGVGRGFGYVLFENTDAVHLALKLN 348
Query: 403 NLKLRDRELRLSHA------QQNCTPSKRKDVAP--AVNSPPKKFVLDSRTLGSGNRS 452
N +L R+LR+ + +QN PS + P +NS K V S++L G ++
Sbjct: 349 NSELMGRKLRVMRSVNKEKLKQNSNPSLKNATKPKQGLNSAAKN-VGHSKSLFIGEKA 405
>gi|403347285|gb|EJY73063.1| RNA-binding protein 34 [Oxytricha trifallax]
Length = 412
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 22/196 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-DTKIPRKGAILQKQINENADS 284
RT FVGN+PL+ + K L+K F +G + + RS+ ++KI KG I++K+ DS
Sbjct: 127 RTTFVGNVPLETESKDLMKLFKPYGNVVKIWFRSIACDHESKITHKGKIIKKEYGLQKDS 186
Query: 285 VHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+AY++FK+++S +AA N +G H+R+D D T+F+GN
Sbjct: 187 KNAYVLFKTKESAIKAAENLNQIQLGNKHLRVDTENQEN-----------DYDTTIFIGN 235
Query: 344 LPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
LP+ + DE++ F CG + VRV+R +GKGIAYV FKT+E I+
Sbjct: 236 LPWVLNDEDLRAHFEDCG------KILNVRVVRDKDNFIGKGIAYVQFKTKEEMRKSIET 289
Query: 402 RNLKL-RDRELRLSHA 416
+N L R RELR+ A
Sbjct: 290 KNRSLFRGRELRIKKA 305
>gi|145482073|ref|XP_001427059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394138|emb|CAK59661.1| unnamed protein product [Paramecium tetraurelia]
Length = 347
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 113/203 (55%), Gaps = 19/203 (9%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII------DTKIPRKGAI 273
D ++ RT+FVGN+ + KK + K F ++GEI+ V RS+P+ + K+P + A+
Sbjct: 60 DADRIKRTLFVGNVSINAKKNDMRKLFTQYGEIEKVWFRSIPVDRKTKKENVKLPVRAAV 119
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
L +I E A S + YI+FK +S ++A + + H+R C L+G+
Sbjct: 120 LMGKIQEGAQSQNCYILFKDVKSAKSATQQDGQLFMNLHLR----CT----LEGQKKK-- 169
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
D KT FVGNLPFD+++EE+ + F + + VRVI+ P VGKG YV F +
Sbjct: 170 DHIKTAFVGNLPFDIEEEEVRKAF---EEAFGEINYVRVIKDPQRHVGKGFGYVCFNEFQ 226
Query: 394 AANLVIKRRNLKLRDRELRLSHA 416
+ ++ ++++++ RE+R+ A
Sbjct: 227 SLKKALQAQSIEIKGREVRIKKA 249
>gi|344303112|gb|EGW33386.1| hypothetical protein SPAPADRAFT_50271 [Spathaspora passalidarum
NRRL Y-27907]
Length = 463
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 22/208 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKE-----FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V LI + F +G++DS+R RS+ + +PRK + +K +++
Sbjct: 167 RTVFVGNVPASVITSKLIAKQFKNLFKAYGKVDSMRFRSISF-EENLPRKISFAKKNLHK 225
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ DSV+AY+VFK + ++ + N V +H+R+D P K D K+++F
Sbjct: 226 SRDSVNAYVVFKEKGASMDSRKLNGTVFEDHHLRVDHVAHPAAK---------DTKRSIF 276
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LV 398
VGNL F+ K++ +++ F L++ VE+VR+IR +GKG A V FK + N L+
Sbjct: 277 VGNLDFEEKEDNLWKYFN--KKLDNDVESVRIIRDSKTNLGKGFALVQFKDSLSVNKALL 334
Query: 399 IKRRNLKL---RDRELRLSHAQQNCTPS 423
+ + + + R+LR+S A+ + PS
Sbjct: 335 LNDKPINVDGKNGRKLRISRAKSHAKPS 362
>gi|345566286|gb|EGX49229.1| hypothetical protein AOL_s00078g262 [Arthrobotrys oligospora ATCC
24927]
Length = 574
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 138/267 (51%), Gaps = 42/267 (15%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGEIDSVRIR 258
+ETE L +R+ E K T+FVGNLP K + KTL F G + S+R R
Sbjct: 269 HETEGDLQNRELE------KANCTVFVGNLPSSIISDKAQYKTLQSAFKVHGVVSSIRFR 322
Query: 259 SVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
S+ D +IPRK A + K ++ + ++V+AYIVFK+ ++ ++L N ++ +HIR+D
Sbjct: 323 SIAFSD-QIPRKAAFITKALHVDQNNVNAYIVFKTPEAARSSLQLNGTIVLNHHIRVDSV 381
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
P K D +K VFVGNL F+ +E +++ F CG VE VR++R
Sbjct: 382 AHPAKN---------DSRKCVFVGNLDFEAAEESLWKHFSTCG------KVENVRLVRDA 426
Query: 377 HMRVGKGIAYVLFKTR---EAANLVIKRRNLKL---RDRELRLSHAQQNCTPSKRKDVAP 430
VGKG AYV F E A L++ + +++ R R+LR++ A +N D AP
Sbjct: 427 KTNVGKGFAYVQFADDVDVEKA-LLLNEKPMEVEKGRKRKLRVTRA-KNMRKKAVPDSAP 484
Query: 431 -AVNSPPKKFVL----DSRTLGSGNRS 452
AV S K V D R G+ R+
Sbjct: 485 GAVRSAKKNGVYVPKADPRQSGAAGRA 511
>gi|355715678|gb|AES05401.1| RNA binding motif protein 34 [Mustela putorius furo]
Length = 398
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 123/213 (57%), Gaps = 23/213 (10%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 137 NQRKKIEINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFREYGQIESVRFRSLIPA 192
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK + + AL N +I G IR+D A
Sbjct: 193 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDKSAATKALKRNGTLIADGFRIRVDLASETS 252
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ +++ + + F CG S+ AVR++R V
Sbjct: 253 SR----------DKRSVFVGNLPYKIEESAVEEHFLDCG------SIVAVRIVRDRVTGV 296
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G+G YVLF+ +A +L +K N +L R+LR+
Sbjct: 297 GRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 329
>gi|440901028|gb|ELR52037.1| RNA-binding protein 34 [Bos grunniens mutus]
Length = 428
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 122/213 (57%), Gaps = 23/213 (10%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIQINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRACPPR 322
+ + +K A ++++I+ + +++AY+VFK E + AL N A G +R+D A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALERNGAQFEEGFRVRVDLATETS 282
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRV 380
+ K++VFVGNLP+ V++ + + F CG +V AVR++R V
Sbjct: 283 SR----------DKRSVFVGNLPYKVEESAVEKHFLACG------NVVAVRIVRDQVTGV 326
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G+G YVLF+ +A +L +K N +L R+LR+
Sbjct: 327 GRGFGYVLFENTDAVHLALKLNNSELMGRKLRV 359
>gi|308477111|ref|XP_003100770.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
gi|308264582|gb|EFP08535.1| hypothetical protein CRE_15490 [Caenorhabditis remanei]
Length = 393
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 117/210 (55%), Gaps = 17/210 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+F+GN+PL + +K++ K F FG I SVR+R++ ++ K+ ++ L ++N+ +S+
Sbjct: 142 KTVFIGNMPLTMNEKSVRKIFSDFGAISSVRMRNLIPVNEKLTKRVTHLSGKLNDKQNSL 201
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ + E+S E +L +N + + +R+D+ +K+ G+D +FVGNLP
Sbjct: 202 IFYVKYNDEESVEKSLKYNGTKLEDHIVRVDKVGSKKKEF-GKDL-------AIFVGNLP 253
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
FD+ ++ + F + VEAVR++R VGKG A+V FK + +L + +K
Sbjct: 254 FDITEDALITFFT---EQIGQVEAVRIVRDKATGVGKGFAFVNFKQDSSVSLALSMETIK 310
Query: 406 LRDRELRLS------HAQQNCTPSKRKDVA 429
+ R+LR++ H + T KR +A
Sbjct: 311 MEKRDLRITKVMKKGHLTKIQTAKKRAPIA 340
>gi|296230931|ref|XP_002760846.1| PREDICTED: RNA-binding protein 34 [Callithrix jacchus]
Length = 429
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 118/206 (57%), Gaps = 23/206 (11%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+ + + +K
Sbjct: 174 INQEEERLKNE----RTVFVGNLPVTCDKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKK 229
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK + AL N A I G IR+D A
Sbjct: 230 LAAIKRKIHPDQKNINAYVVFKDGSAATQALKRNGAQIADGFRIRVDLA----------S 279
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
A K++VFVGNLP+ V++ + + F CG S+ AVR++R +GKG YV
Sbjct: 280 ATSSRDKRSVFVGNLPYKVEESAVEKHFLDCG------SIMAVRIVRDQVTGIGKGFGYV 333
Query: 388 LFKTREAANLVIKRRNLKLRDRELRL 413
LF+ ++ +L +K N +L R+LR+
Sbjct: 334 LFENTDSVHLALKLNNSELMGRKLRV 359
>gi|190347472|gb|EDK39744.2| hypothetical protein PGUG_03842 [Meyerozyma guilliermondii ATCC
6260]
Length = 442
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 134/267 (50%), Gaps = 25/267 (9%)
Query: 167 RKRDDVEKDYVEKKY-GVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLL 225
R R E D +E KY + K+ K + R + V KE+ FD K
Sbjct: 108 RPRKSEEDDDIEGKYFQALNKDTHPKNTDEKKDRTRTPKVATATKVDLKEDEFD---KAE 164
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+P V +K K F + G ++SVR RS+ + +PRK A QK+++
Sbjct: 165 RTVFVGNVPATVVTSKSTQKQFKKLFSEVGPVESVRFRSIAFGEA-LPRKAAFAQKKLHG 223
Query: 281 NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
DSV+AY+V+K + + A++ N +H+R+D P K D K+T+
Sbjct: 224 ARDSVNAYVVYKEKTPSRNAVSRLNAREFDHHHLRVDHVAHPVAK---------DNKRTI 274
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--- 396
FVGNL F+ +EE+++ F D + VE+VRV+R +GKG A V FK + N
Sbjct: 275 FVGNLDFEASEEELWRYFNSHTD--NDVESVRVVRDSKTNLGKGFALVQFKDSLSVNKCI 332
Query: 397 LVIKRRNLKLRDRELRLSHAQQNCTPS 423
L+ + K R+LR+S A + PS
Sbjct: 333 LLNDKPMSKESKRKLRISRANAHAKPS 359
>gi|448091708|ref|XP_004197396.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
gi|448096281|ref|XP_004198427.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
gi|359378818|emb|CCE85077.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
gi|359379849|emb|CCE84046.1| Piso0_004648 [Millerozyma farinosa CBS 7064]
Length = 450
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 22/211 (10%)
Query: 223 KLLRTIFVGNLPLKV--KKKTL---IKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
K+ RT+FVGN+ KV KK L K F +FG+++S+R+RS+ D K+PRK A ++K
Sbjct: 163 KVSRTVFVGNVTSKVITDKKVLRKFKKLFSQFGKVESIRLRSISFAD-KVPRKVAFVKKT 221
Query: 278 INENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
++E + +AY+VF + S + N V H+R+D P K D K
Sbjct: 222 LDETRATANAYVVFAEKPASLKCVPELNATVFEDFHLRVDHLAHPSK---------TDNK 272
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+TVF+GNL F+ +E +++ F +++ + VEAVR++R P GKG A+V FK + N
Sbjct: 273 RTVFIGNLSFEESEETLWRYFNEVSN--NDVEAVRIVRDPKTNFGKGFAFVQFKDTLSVN 330
Query: 397 LVIKRRNLKLR----DRELRLSHAQQNCTPS 423
+ +R +R+LR++ A PS
Sbjct: 331 KALLENGKPIREGEKERKLRITRASAKAKPS 361
>gi|348685768|gb|EGZ25583.1| hypothetical protein PHYSODRAFT_479368 [Phytophthora sojae]
Length = 379
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 27/213 (12%)
Query: 214 KEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-- 271
KE +DE K RT+FVGN+ L +K + F G+++SVR+R +PI + G
Sbjct: 63 KEPTIEDE-KASRTVFVGNVSLDATQKDIKTHFSVCGKVESVRLRHMPIAGCAVGEAGNQ 121
Query: 272 -----AILQKQINENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKL 325
K+I A D+ +AY++F E S E AL N ++ IR+DR+
Sbjct: 122 KLMMKVCANKKILTTAKDNCNAYVIFAEESSVEDALKLNGTILVQKKIRVDRS------- 174
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS-----VEAVRVIRHPHMRV 380
P+ D ++VFVGN+PF DE++ Q F L S +E VR+IR +
Sbjct: 175 ----TPVIDAHRSVFVGNVPFKCTDEQMQQFFA--KHLRSEEEPEPIENVRLIRDRESGL 228
Query: 381 GKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
GKG Y+L KT + RNLK+ RELR+
Sbjct: 229 GKGFGYLLLKTPALVAKTLALRNLKMETRELRV 261
>gi|19115130|ref|NP_594218.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe
972h-]
gi|17367899|sp|O13741.1|NOP12_SCHPO RecName: Full=Nucleolar protein 12
gi|2462671|emb|CAB11047.1| RNA-binding protein Nop12 (predicted) [Schizosaccharomyces pombe]
Length = 438
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 28/214 (13%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+T+FV NLP +V K L K F +FG +DS+R RS+ + IPRK A +K+ +
Sbjct: 164 KTVFVNNLPARVVTNKGDYKDLTKHFRQFGAVDSIRFRSLAFSEA-IPRKVAFFEKKFHS 222
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
D+V+AYIVF+ S +AL+ N + H+R+D P + D K+ VF
Sbjct: 223 ERDTVNAYIVFRDSSSARSALSLNGTMFMDRHLRVDSVSHPMPQ---------DTKRCVF 273
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VGNL F+ ++E +++ F CG S++ VR++R P +GKG AY+ FK +
Sbjct: 274 VGNLAFEAEEEPLWRYFGDCG------SIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKA 327
Query: 399 IKRRNLKLRD-RELRLSHAQ----QNCTPSKRKD 427
+ K+ + R LR+ A+ ++ T SKR D
Sbjct: 328 LLLNEKKMPEGRTLRIMRAKSTKPKSITRSKRGD 361
>gi|291402150|ref|XP_002717371.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 430
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 118/206 (57%), Gaps = 23/206 (11%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK L F ++G I+SVR RS+ + + +K
Sbjct: 173 INQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGPIESVRFRSLIPAEGTLSKK 228
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK + + AL N I G IR+D A +
Sbjct: 229 LAAIKRKIHPDQKNINAYVVFKDQSAATKALERNGTHIADGFRIRVDLASETSSR----- 283
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG ++ AVR++R +GKG YV
Sbjct: 284 -----DKRSVFVGNLPYKVEETAVEEHFLDCG------NIVAVRIVRDQITGIGKGFGYV 332
Query: 388 LFKTREAANLVIKRRNLKLRDRELRL 413
LF+ +++ +L +K N +L R+LR+
Sbjct: 333 LFENKDSVHLALKLNNSELMGRKLRV 358
>gi|150865243|ref|XP_001384380.2| hypothetical protein PICST_59522 [Scheffersomyces stipitis CBS
6054]
gi|149386499|gb|ABN66351.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 447
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 27/212 (12%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RTIFVGN+ K+K K K F FG IDSVR RS+ +PRK AI K +++
Sbjct: 146 RTIFVGNVTAEVITSKIKTKNFKKFFSDFGAIDSVRFRSISF--EGLPRKVAIATKNLHK 203
Query: 281 NADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+ + +AY+VFK E S +A N V H+R+D P AP D ++T+
Sbjct: 204 SRGTCNAYVVFKEKEASLKAVSGANAKVFENFHLRVDHVAHP--------AP-KDNRRTI 254
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--L 397
FVGNL F+ ++E +++ F L++ VE+VRV+R VGKG A V FK + N L
Sbjct: 255 FVGNLDFEEEEENLWRYFN--TKLDNDVESVRVVRDSKTNVGKGFALVQFKDTLSVNKAL 312
Query: 398 VIKRRNL------KLRDRELRLSHAQQNCTPS 423
++ + + K + R+LR++ A+ + PS
Sbjct: 313 LLNDKPMTVDKDSKKKGRKLRITRAKSHTKPS 344
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 16/190 (8%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIFVGNLP V KK L K F +FG+ID++R+R + ++ A ++ +++ SV
Sbjct: 358 KTIFVGNLPKDVTKKKLKKIFKQFGKIDTIRLRGKIAKSANVSKRVAAIKNELHPKLKSV 417
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AYI F S++S + +L+ N GN++R++ + K +D KK++F+GNL
Sbjct: 418 YAYIKFVSKESVKESLSMNGTEFEGNYLRVNASNKSENK--------FDSKKSIFLGNLH 469
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+++ D I + F CG +E+VRVIR VGKG YV FK +A L ++
Sbjct: 470 YNIDDNTIIKHFKQCG------EIESVRVIRDNKTGVGKGFGYVNFKNEDAVTLALELDG 523
Query: 404 LKLRDRELRL 413
+ +RE+R+
Sbjct: 524 TTISNREVRV 533
>gi|321463774|gb|EFX74787.1| hypothetical protein DAPPUDRAFT_306960 [Daphnia pulex]
Length = 432
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 135/272 (49%), Gaps = 35/272 (12%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R + V NLP+K+K++T+ F K G+I++V +R + D +P+K A+++++ + N S+
Sbjct: 146 RVVLVKNLPIKIKRRTVHHFFAKCGKINAVWLRCAALADPAMPKKVAVIKQEFHPNRQSI 205
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A++ F++ ++ +AA+A NHI + L + + +FVGNL
Sbjct: 206 SAFVRFETNEAAQAAVAMTGCEFQENHIAVS--------LLSDSNIKKQLSLGIFVGNLT 257
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
FDV DE ++ F CG + VR+IR +GKG YV F++ ++ L +K
Sbjct: 258 FDVTDEALWLHFGECG------KISDVRIIRDRVNGMGKGFGYVNFESADSVELALKLDQ 311
Query: 404 LKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGL 463
L DR +R+S ++N P K ++ P R + K + +Y+ +
Sbjct: 312 SLLNDRPIRVSRCKKNPKPFKTEEKKPG-----------------KEREDGKESGAYKRI 354
Query: 464 QASKSCTQKKVHSGSSGVVKMKKSRTQKGERP 495
+ +S ++K G+ + KMKK + +P
Sbjct: 355 KHKESQEERK--KGAGWISKMKKRNKESYHKP 384
>gi|312075541|ref|XP_003140463.1| RNA recognition domain-containing protein [Loa loa]
gi|307764379|gb|EFO23613.1| RNA recognition domain-containing protein [Loa loa]
Length = 359
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 18/193 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGN PL +K + K F +FG ++SVR+ + KI +K + I S+
Sbjct: 133 RTVFVGNAPLSSSRKGIKKLFSQFGAVESVRLHCFIAANEKITKK-----RDIPSGVRSL 187
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ +S EAALA N GN +R+D C RK Y+ + TVFVGNLP
Sbjct: 188 TFYVKFKNAKSKEAALALNGEKYDGNLLRVDSCCAKRK---------YNCRTTVFVGNLP 238
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+DV + E+ F ++ +V VR++R KG A+V FK A L ++
Sbjct: 239 YDVSENELIAHF----EMSGNVSFVRIVRDSRTGNSKGFAFVAFKDSAAVPLALQLDGSI 294
Query: 406 LRDRELRLSHAQQ 418
+ R LR Q+
Sbjct: 295 FKRRPLRTKRVQK 307
>gi|426255548|ref|XP_004021410.1| PREDICTED: RNA-binding protein 34 [Ovis aries]
Length = 427
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 203 DNETEDMLVHRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
D+ E ++ RK+ + E + L RT+FVGNLP+ KKK L F ++G+I+SVR RS
Sbjct: 158 DDVEETVVNQRKKIQINQEAERLKNERTVFVGNLPVTCKKKKLKSFFKEYGQIESVRFRS 217
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRA 318
+ + + +K A ++++I+ + +++AY+VFK E + AL N A G +R+D A
Sbjct: 218 LIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKDENAATKALERNGAQFAEGFRVRVDLA 277
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
+ K++VFVGNLP+ V++ + + F CG +V AVR++R
Sbjct: 278 TETSSR----------DKRSVFVGNLPYKVEESAVEKHFLACG------NVVAVRIVRDQ 321
Query: 377 HMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA------QQNCTPS 423
VG+G YVLF+ +A +L +K N +L R+LR+ + +QN PS
Sbjct: 322 VTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVHKEKLKQNSNPS 374
>gi|255713116|ref|XP_002552840.1| KLTH0D02640p [Lachancea thermotolerans]
gi|238934220|emb|CAR22402.1| KLTH0D02640p [Lachancea thermotolerans CBS 6340]
Length = 462
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 73/374 (19%)
Query: 163 KTKKRKRDDVEKDYVEKKY--GVIAKEE-EGKKVGVGEKRKKADNETEDML------VHR 213
K +KRK D + + +E +Y ++ KE+ E ++ E K D E E + R
Sbjct: 100 KRQKRKALDADNENLESEYYSKLLEKEQGEAEETSAAEPESK-DGEAEASVQATAASASR 158
Query: 214 KEEGFDDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKF---------GE------------ 251
K+ ++ K RT+FVGN+P+ V K L K+F K G+
Sbjct: 159 KDLKEEELQKAERTVFVGNVPVDVVTSKPLKKQFKKLFAVAKKHSGGDDSDEDKATGPDT 218
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVI 308
++S+R RS+ + +PRK A +Q++++++ DS +AY+V+ + + +AA N V
Sbjct: 219 FAVESIRFRSISF-EEALPRKVAFVQQKLHKSRDSANAYVVYAEKAAVKAACQTLNGTVF 277
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVE 368
+H+R+D P + +D K++VFVGNL F+ +E +++ F + +E
Sbjct: 278 YDHHLRVDSVAHPAQ---------HDNKRSVFVGNLDFEEAEENLWKHF----EKSGEIE 324
Query: 369 AVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQNCTPSKRK 426
VRV+R +GKG AYV F+ + N L++ + L R+LR++ + K
Sbjct: 325 YVRVVRDSKTNMGKGFAYVQFRDFQDINKALLLNDQKLNGTGRKLRVTRCKN------MK 378
Query: 427 DVAPAVNSPPKKFVLDSRT--------LGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGS 478
P+ PK D RT LG +RS ++ +GL+A+K S
Sbjct: 379 KTQPSSQKHPKALTDDQRTKLGRAKKVLGKADRSTVGKDVTIEGLRATKGA--------S 430
Query: 479 SGVVKMKKSRTQKG 492
+ ++K KK R++ G
Sbjct: 431 TPILKKKKQRSKSG 444
>gi|268536642|ref|XP_002633456.1| Hypothetical protein CBG06224 [Caenorhabditis briggsae]
Length = 393
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGN+PL + +K++ + F FG++ SVR+R + + K+ R+ L ++++ S+
Sbjct: 144 KTVFVGNMPLTMNEKSVSRIFSDFGKVSSVRMRCLIPTNEKLTRRVTHLSGKLSDKQTSL 203
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F+ E+S E AL +N + + IR+D KK G+D +FVGNLP
Sbjct: 204 TFYVKFEEEESVEKALKYNGTKLEDHLIRVDTVGT--KKGFGKDMA-------IFVGNLP 254
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
FD+ ++ + F + ++EAVR+IR GKG A+V FK +A+L + +K
Sbjct: 255 FDITEDTLSNFFT---EKVGAIEAVRIIRDKDSGKGKGFAFVNFKQDSSASLALSMETIK 311
Query: 406 LRDRELRLS 414
+ R+LR++
Sbjct: 312 MDKRDLRIT 320
>gi|50555293|ref|XP_505055.1| YALI0F05918p [Yarrowia lipolytica]
gi|74689345|sp|Q6C2Q7.1|NOP12_YARLI RecName: Full=Nucleolar protein 12
gi|49650925|emb|CAG77862.1| YALI0F05918p [Yarrowia lipolytica CLIB122]
Length = 509
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 92/169 (54%), Gaps = 19/169 (11%)
Query: 227 TIFVGNLPLKV-KKKTLIKEF----IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
TIFVGN+ +V KT+ F G + SVR RS+ +PRK A + +Q +
Sbjct: 169 TIFVGNVSSEVITDKTVYNNFKALFAAIGTVASVRFRSISFSKL-LPRKVAFISQQFHSK 227
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
D+V+AYIVFK+ +S + AL N +V G H+R+D P + D K+ VFV
Sbjct: 228 RDTVNAYIVFKNVKSVKGALTLNGSVFKGFHMRVDSVAHPGAQ---------DHKRCVFV 278
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
G L F+ ++E +++ F D VE VR++R P VGKG AYV FK
Sbjct: 279 GALDFEEQEESLWEAFSSCGD----VEYVRIVRDPKTNVGKGFAYVQFK 323
>gi|146416983|ref|XP_001484461.1| hypothetical protein PGUG_03842 [Meyerozyma guilliermondii ATCC
6260]
Length = 442
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 132/263 (50%), Gaps = 28/263 (10%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIF 229
DD+E Y + + K+ K + R + V KE+ FD K RT+F
Sbjct: 116 DDIEGKY----FQALNKDTHPKNTDEKKDRTRTPKVATATKVDLKEDEFD---KAERTVF 168
Query: 230 VGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
VGN+P V +K K F + G ++SVR RS+ + +PRK A QK+++ DS
Sbjct: 169 VGNVPATVVTSKSTQKQFKKLFSEVGPVESVRFRSIAFGEA-LPRKAAFAQKKLHGARDS 227
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
V+AY+V+K + + A++ N +H+R+D P K D K+T+FVGN
Sbjct: 228 VNAYVVYKEKTPSRNAVSRLNAREFDHHHLRVDHVAHPVAK---------DNKRTIFVGN 278
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN---LVIK 400
L F+ +EE+++ F D + VE+VRV+R +GKG A V FK + N L+
Sbjct: 279 LDFEALEEELWRYFNLHTD--NDVESVRVVRDSKTNLGKGFALVQFKDSLSVNKCILLND 336
Query: 401 RRNLKLRDRELRLSHAQQNCTPS 423
+ K R+LR+S A + PS
Sbjct: 337 KPMSKESKRKLRISRANAHAKPS 359
>gi|341893358|gb|EGT49293.1| hypothetical protein CAEBREN_16941 [Caenorhabditis brenneri]
Length = 401
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGN+PL + +K++ + F FG + SVR+R++ I+ K+ ++ L ++N+ S+
Sbjct: 150 KTVFVGNMPLTMNEKSVRRIFSDFGTVSSVRMRNLIPINEKLSKRVTHLSGKLNDKQSSL 209
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F++E+S E AL +N + + +R+D+ +K G+D +FVGNLP
Sbjct: 210 TFYVKFENEESVENALKYNGTKLEDHVVRVDKVGNKKKDF-GKDLA-------IFVGNLP 261
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ ++ + F + VE VR++R GKG A+V FK + +L + +K
Sbjct: 262 FEITEDALITFFS---EQIGPVEGVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMETIK 318
Query: 406 LRDRELRLS 414
+ R+LRL+
Sbjct: 319 MEKRDLRLT 327
>gi|156839965|ref|XP_001643668.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156114288|gb|EDO15810.1| hypothetical protein Kpol_1040p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 467
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 157/315 (49%), Gaps = 49/315 (15%)
Query: 219 DDEGKLLRTIFVGNLP-LKVKKKTLIKEFIK-FGEID-------SVRIRSVPIIDTKIPR 269
D+ K RT+F+GN+P + + + K+F K F ID ++R RS+ D +PR
Sbjct: 177 DELEKAKRTVFIGNVPNTVITSRNIYKQFKKLFSLIDEKKFSIETIRFRSISF-DEALPR 235
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
K A +Q++++++ +S++AYIV+K + S N V NH+R+D P
Sbjct: 236 KVAFVQQKLHKSRNSINAYIVYKEKSSVNPICTKLNGTVFQKNHLRVDSVSNP------- 288
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
++ K+++FVGN+ F+ +E ++ F CG +E VR+IR +GKG AY
Sbjct: 289 --AAHENKRSIFVGNMDFEQDEETLWSHFESCG------EIEYVRIIRDSKTNLGKGFAY 340
Query: 387 VLFKTREAANLVIKRRNLKLRD----RELRLSHAQQNCTPSKRKDVA---PAVNSPPK-K 438
+ FK ++ N + + K + R+LR+S + PS + +N K K
Sbjct: 341 IQFKDLQSVNKALLLNDKKFDNTKTTRKLRVSRCKNIKKPSSSSATSNNKQKLNESQKTK 400
Query: 439 FVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQ 498
R LG +R+ + ++ +GL+A+K T +S +K KK R++ G K
Sbjct: 401 IGRAKRILGKADRATAGEKITIEGLRAAKGQT-------ASSHLKRKKERSKTGRVTK-- 451
Query: 499 PEKRPAVALRKARAK 513
++A +KA+AK
Sbjct: 452 ----RSIAFKKAQAK 462
>gi|17539754|ref|NP_502291.1| Protein F11A10.7 [Caenorhabditis elegans]
gi|15718191|emb|CAC70081.1| Protein F11A10.7 [Caenorhabditis elegans]
Length = 394
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 11/188 (5%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGN+PL + +K++ + F FG I SVR+R++ + K+ ++ L ++N+ S+
Sbjct: 144 TVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHLTGKLNDKQSSLT 203
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F +E+S E AL +N + + IR+D+ +K+ G+D +FVGNLPF
Sbjct: 204 FYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEF-GKDM-------AIFVGNLPF 255
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
++ ++ + F VEAVR++R GKG A+V FK + +L + +K+
Sbjct: 256 EITEDALITFFSAQI---GPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMETIKM 312
Query: 407 RDRELRLS 414
R+LR++
Sbjct: 313 EKRDLRIT 320
>gi|254581390|ref|XP_002496680.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
gi|238939572|emb|CAR27747.1| ZYRO0D05654p [Zygosaccharomyces rouxii]
Length = 441
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 183/359 (50%), Gaps = 56/359 (15%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF---- 218
K++ +KR E + +E++Y ++E + G+ K+A+ +D R +EG
Sbjct: 96 KSQSKKRHSDEDEGLEERYFAKLMDQEPAE-DAGDADKQAEKPQQD---ERPQEGAKKID 151
Query: 219 ---DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFGE----IDSVRIRSVPIIDTKIPRK 270
D+ K RT+FVGN+P V K+L ++F K + ++S+R RS+ + +PRK
Sbjct: 152 LKEDELEKAERTVFVGNVPADVIPNKSLHRQFKKLFQDEKGLESIRFRSISF-EVPLPRK 210
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGED 329
A +Q++++++ SV+AY+V+K++ S + + N V H+R+D P K
Sbjct: 211 VAFVQQKLHKSRGSVNAYVVYKNKNSVSSVCSRLNGQVFVDRHLRVDSVTHPAK------ 264
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
+D K++VFVGNL F+ +E +++ F CG +E VR+IR P +GKG AYV
Sbjct: 265 ---HDNKRSVFVGNLDFEEDEESLWRHFGSCG------EIEYVRIIRDPKTNMGKGFAYV 315
Query: 388 LFKT--REAANLVIKRRNLKL--RDRELRLSHAQQNCTPSKRKDVAPAV----------N 433
FK + L++ + L+ + R+LR++ +N S K+ A ++ +
Sbjct: 316 QFKDFPNVSKALLLNDKPLESNGKSRKLRVTRC-RNLKKSSNKNGAQSLKQNGIMNKLSD 374
Query: 434 SPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKG 492
S K + L + + ++ +G++ASK+ S S ++K +K R+Q G
Sbjct: 375 SHKTKLGRAKKVLNKADSAQLGKEITVEGIRASKA------DSKPSAILKKRKKRSQSG 427
>gi|341884119|gb|EGT40054.1| hypothetical protein CAEBREN_26109 [Caenorhabditis brenneri]
Length = 401
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGN+PL + +K++ + F FG + SVR+R++ I+ K+ ++ L ++N+ S+
Sbjct: 150 KTVFVGNMPLTMNEKSVRRIFSDFGTVSSVRMRNLIPINEKLSKRVTHLSGKLNDKQSSL 209
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F++E+S E AL +N + + +R+D+ +K G+D +FVGNLP
Sbjct: 210 TFYVKFENEESVEKALKYNGTKLEDHVVRVDKVGNKKKDF-GKDLA-------IFVGNLP 261
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F+ ++ + F ++ VE VR++R GKG A+V FK + +L + +K
Sbjct: 262 FETTEDALITFF---SEQIGPVEGVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSMETIK 318
Query: 406 LRDRELRLS 414
+ R+LRL+
Sbjct: 319 MEKRDLRLT 327
>gi|328874715|gb|EGG23080.1| hypothetical protein DFA_05210 [Dictyostelium fasciculatum]
Length = 450
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 135/239 (56%), Gaps = 22/239 (9%)
Query: 206 TEDMLVHRKEE---GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI 262
TE+ RKE+ ++EGK RTIF+ N+ L + L + F K+G+++S R+RS+
Sbjct: 214 TEEDKTKRKEQDTKAREEEGK--RTIFLSNVELHTNPRELKQFFSKYGKVESARLRSIST 271
Query: 263 IDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP 321
RK + + K+ NE ++ +AY+VF+ E+S + +A N + H+ +D A
Sbjct: 272 ESKDSNRKDSYINKKFNEKRETCNAYVVFEKEESAQKVVAECNGIIFKERHLYVDLAS-- 329
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG 381
K KG +++TVF+GN+PF+ ++EEI+ LF + VE+VR++R G
Sbjct: 330 HKHEKG------SVEETVFIGNVPFESENEEIFTLF---DHAFGGVESVRLVRDGQTGQG 380
Query: 382 KGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDV--APAVNSPPKK 438
KG YVLF+ ++ A IK + +K+ +RELR+ +QN K K+V PA +P K+
Sbjct: 381 KGFGYVLFEKKKYAKAAIKAKTIKMNERELRIFPNKQN---PKGKNVKKTPAPGAPVKQ 436
>gi|281202984|gb|EFA77185.1| hypothetical protein PPL_12393 [Polysphondylium pallidum PN500]
Length = 487
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIF+ N+ LK K L F +FG I + R RS+P+ RK + K+ +E ++ +
Sbjct: 266 TIFISNIDLKTTKNELKAFFGRFGTIKTARFRSLPVSKEGANRKATYINKEFHEKRETCN 325
Query: 287 AYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AY+V+ K E++ +AA N + HIR+D A K K E+ TVFVG +P
Sbjct: 326 AYVVYSKEEEAQKAADETNGTLFKERHIRVDLASNKHNKGKDEN--------TVFVGGIP 377
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+++++E++++LF D V +VR++R +GKG AYV FK A I+ + L
Sbjct: 378 YELENEDLFKLF---EDNIGDVMSVRIVRDKLTGLGKGFAYVEFKKLINARRAIQAKQLS 434
Query: 406 LRDRELRLSHAQQN 419
+ +R +R+ +QN
Sbjct: 435 IGERTIRVFPNKQN 448
>gi|294656141|ref|XP_458390.2| DEHA2C16170p [Debaryomyces hansenii CBS767]
gi|218511717|sp|Q6BTS9.2|NOP12_DEBHA RecName: Full=Nucleolar protein 12
gi|199430891|emb|CAG86472.2| DEHA2C16170p [Debaryomyces hansenii CBS767]
Length = 462
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 21/207 (10%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGN+ V K K F ++G+I S+R RS+ D +PRK A +K+++
Sbjct: 159 RTVFVGNVNASVVGSKPMYKKFKKLFSQYGKIQSIRFRSISF-DDAVPRKVAFAKKKLHS 217
Query: 281 NADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+ D+++AY+VF + E S + N H+R+D P AP D K+T+
Sbjct: 218 SRDTLNAYVVFAEKEPSLKCVPKLNATEFEHAHLRVDHVAHP--------AP-KDNKRTI 268
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--L 397
FVGNL F+ K+E +++ F D + VE+VRVIR VGKG A V FK + N L
Sbjct: 269 FVGNLDFEEKEETLWRYFNSKTD--NDVESVRVIRDAKTNVGKGFALVQFKDTLSVNKSL 326
Query: 398 VIKRRNLKL-RDRELRLSHAQQNCTPS 423
++ + + + R+LR+S A+ + PS
Sbjct: 327 LLNDKPMSAEKKRKLRISKAKAHTKPS 353
>gi|374106883|gb|AEY95792.1| FACR274Wp [Ashbya gossypii FDAG1]
Length = 426
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 44/213 (20%)
Query: 222 GKLLRTIFVGNLPLK-VKKKTLIKEFIKF--------------------GEIDSVRIRSV 260
K RT+FVGN+P + + K + KEF + ++S+R RS+
Sbjct: 133 AKAERTVFVGNVPHEAITDKKVYKEFKQLVAQRKLSKEDEDDEEQKAEKYAVESIRFRSI 192
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
+ +PRK A +Q++++ DSV+AY+V+ +++ AA N +V +H+R D
Sbjct: 193 -AFEEALPRKVAFVQQKLHHTRDSVNAYVVYAEKEAVTAACKLNGSVFHDHHLRFDSVAH 251
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P AP +D K++VFVGNL F+ +E +++ F CG +E VR++R P
Sbjct: 252 P--------AP-HDRKRSVFVGNLDFEESEESLWKHFMSCG------PIEYVRIVRDPKT 296
Query: 379 RVGKGIAYVLFKTREAANLVIKRRNLKLRDREL 411
VGKG AYV F A+LV + L L D+++
Sbjct: 297 NVGKGFAYVQF-----ADLVSVNKALLLNDKKM 324
>gi|403218189|emb|CCK72680.1| hypothetical protein KNAG_0L00570 [Kazachstania naganishii CBS
8797]
Length = 431
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 165/335 (49%), Gaps = 58/335 (17%)
Query: 194 GVGEKRKKADNETEDMLVHRKEEGF-----DDE-GKLLRTIFVGNLPLK-VKKKTLIKEF 246
G E K D E + V R E+ DDE K RT+FVGNL + + KTL KEF
Sbjct: 101 GETENSLKDDGYVETVKVARAEQAKVLDLKDDELAKAERTVFVGNLANELISSKTLYKEF 160
Query: 247 IKF-------GE-----IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSE 294
K G+ IDS+R RS+ D +PRK A +Q++++++ DS++AYIV+K++
Sbjct: 161 KKLFSTNPKEGQDKALAIDSIRFRSISF-DEPLPRKVAFVQQKLHKSRDSINAYIVYKTK 219
Query: 295 QSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI 353
+ + N H+R+D P K +D +++VF+GNL F+ +E +
Sbjct: 220 DAVKLVCQKLNGVEFHNRHLRVDSVSHPTK---------HDKQRSVFIGNLDFEEDEETL 270
Query: 354 YQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRR------N 403
++ F CG +E VR++R VGKG AYV FK E + L++ + N
Sbjct: 271 WKHFATCG------PIEYVRIVRDSKTNVGKGFAYVQFKQLETVSKALLLNDKPMKSASN 324
Query: 404 LKLRDRELRLSHAQQNCTPSKRKD-----VAPAVNSPPK-KFVLDSRTLGSGNRSNSKVA 457
K + R+LR+S +N + +D +N K +F R LG +++
Sbjct: 325 EKKKARKLRVSRC-KNIKKTAAQDPRNESKYDKLNETQKTRFGRAKRVLGKADKATLGKE 383
Query: 458 MSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKG 492
++ +G++ASK+ Q + +K +K R++ G
Sbjct: 384 LTIEGMRASKNDKQNTLSH-----LKKRKQRSKTG 413
>gi|45185960|ref|NP_983676.1| ACR274Wp [Ashbya gossypii ATCC 10895]
gi|74694749|sp|Q75BJ7.1|NOP12_ASHGO RecName: Full=Nucleolar protein 12
gi|44981750|gb|AAS51500.1| ACR274Wp [Ashbya gossypii ATCC 10895]
Length = 426
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 44/213 (20%)
Query: 222 GKLLRTIFVGNLPLK-VKKKTLIKEFIKF--------------------GEIDSVRIRSV 260
K RT+FVGN+P + + K + KEF + ++S+R RS+
Sbjct: 133 AKAERTVFVGNVPHEAITDKKVYKEFKQLVAQRKLSKEDEDDEEQKAEKYAVESIRFRSI 192
Query: 261 PIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
+ +PRK A +Q++++ DSV+AY+V+ +++ AA N +V +H+R D
Sbjct: 193 -AFEEALPRKVAFVQQKLHHTRDSVNAYVVYAEKEAVTAACKLNGSVFHDHHLRFDSVAH 251
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P AP +D K++VFVGNL F+ +E +++ F CG +E VR++R P
Sbjct: 252 P--------AP-HDRKRSVFVGNLDFEESEESLWKHFMSCG------PIEYVRIVRDPKT 296
Query: 379 RVGKGIAYVLFKTREAANLVIKRRNLKLRDREL 411
VGKG AYV F A+LV + L L D+++
Sbjct: 297 NVGKGFAYVQF-----ADLVSVNKALLLNDKKM 324
>gi|260951259|ref|XP_002619926.1| hypothetical protein CLUG_01085 [Clavispora lusitaniae ATCC 42720]
gi|238847498|gb|EEQ36962.1| hypothetical protein CLUG_01085 [Clavispora lusitaniae ATCC 42720]
Length = 512
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 28/213 (13%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+T+FVGN+ V K K F G++ S+R RS+ D +PRK A ++K ++
Sbjct: 189 KTVFVGNVSNNVITSRQTYKQFKKLFKSIGKVSSIRFRSIAF-DEAVPRKVAFVKKALHS 247
Query: 281 NADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
D+V+AY+VF + E S +AA N + +HIR+D P AP D K+T+
Sbjct: 248 TRDTVNAYVVFAEKEASMKAASRLNATIFDHHHIRVDHVAHP--------AP-KDNKRTI 298
Query: 340 FVGNLPFDVKDEEIYQLF-CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN-- 396
FVGNL F+ ++E +++ F ND VE+VR++R +GKG A V FK + +
Sbjct: 299 FVGNLDFEEQEERLWRYFNSKTND---DVESVRIVRDSKTNLGKGFALVQFKDSLSVDKA 355
Query: 397 LVIKRR------NLKLRDRELRLSHAQQNCTPS 423
L++ + ++K + R+LR+S A+ PS
Sbjct: 356 LLLHEKPMVVEGDVKQKSRKLRISRAKAYAKPS 388
>gi|391336574|ref|XP_003742654.1| PREDICTED: nucleolar protein 12-like [Metaseiulus occidentalis]
Length = 411
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 14/203 (6%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD + +TIFV NLP K ++K + + F K G+I VR + IP + AI ++ +
Sbjct: 151 DDPAFIPQTIFVKNLPPKSQRKHVKRLFEKCGDILFVRFANAIPAKAGIPVEAAIKKRSL 210
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+ ++ A++VFK S + A+ N G+H+R+DR +A K++
Sbjct: 211 IKEGTTISAFVVFKDASSVQTAIDLNGIEYEGHHLRVDR----------REASNIPQKRS 260
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VF GN+PFD D+ ++ F + +++ VRV+R +GKGIA+V+FK +A L
Sbjct: 261 VFCGNIPFDTTDDALWDFF----EEAGAIDYVRVVRDNETGIGKGIAFVVFKDASSAALA 316
Query: 399 IKRRNLKLRDRELRLSHAQQNCT 421
++ + + + R +R+S ++ T
Sbjct: 317 LEFSSKEFQGRAIRVSAIEKRKT 339
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 19/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G I+SVR RSV + +K A ++++ + ++
Sbjct: 173 RTVFVGNLPVTCNKKKLKSIFKEYGPIESVRFRSVIPAEGISTKKLAAIKRKFHPEQKNI 232
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E S AL N I G IR+D A + D K++VFVGNL
Sbjct: 233 NAYVVFKKESSAAKALKRNGTQISDGFRIRVDLAS----ETSSRD------KRSVFVGNL 282
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
+ +++ + + F CG V AVR++R GKG YVLF +A L +K
Sbjct: 283 AYKIEEASVQEHFSDCG------QVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLALKLN 336
Query: 403 NLKLRDRELRL 413
N +L R+LR+
Sbjct: 337 NSELMGRKLRV 347
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 109/190 (57%), Gaps = 15/190 (7%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIF+ N+P + K TL K F ++G ID++R R++ + KI +K A +++ I+ +V
Sbjct: 267 KTIFIDNIPKETKITTLKKVFGQYGPIDNLRFRNIVPKNPKISKKVAAIKQDIHPKIVTV 326
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AYI +KSE+S + AL+ N GN++ + KL E ++IKK++F+GNL
Sbjct: 327 VAYIKYKSEESAKKALSMNGKKFEGNYVNVKIVA----KLGQEK---HNIKKSIFIGNLK 379
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
F + +I++ F CG +E+VR+IR +G YV FK+ +A L +K
Sbjct: 380 FGMNTNDIWENFSKCG------EIESVRLIRDKKTGQTRGFGYVNFKSEDAVTLALKLDG 433
Query: 404 LKLRDRELRL 413
+++ +R +R+
Sbjct: 434 VEINNRPVRV 443
>gi|401840528|gb|EJT43313.1| NOP12-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 460
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 178/396 (44%), Gaps = 82/396 (20%)
Query: 169 RDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF--DDEGKLLR 226
RDD ++ Y + KE G E +KAD + K+ F D+ K R
Sbjct: 90 RDDENENLEAHYYAKLLKEGPEGDDGKSEATRKADGPSSSTTSAAKKVDFKEDELEKAER 149
Query: 227 TIFVGN-LPLKVKKKTLIKEFIK-FG---------------------------EIDSVRI 257
T+F+GN L + K + KEF K FG I+S+R
Sbjct: 150 TVFIGNILSTVITSKKVYKEFKKLFGTNPVTKTEESDNDEEKEDAKKDNSNAFAIESIRF 209
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
RS+ D +PRK A +Q++ +++ D+V+AY+V+K+ + + N V +H+R+D
Sbjct: 210 RSISF-DEALPRKVAFVQQKFHKSRDTVNAYVVYKNRSAVRQICSNLNATVFQNHHLRVD 268
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIR 374
P AP +D K+++FVGNL F+ +E +++ F CG +E VR++R
Sbjct: 269 AVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFESCG------GIEYVRIVR 313
Query: 375 HPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-------------RDRELRLSHA--- 416
+GKG AYV FK E+ N L++ + +K + R+LR+S
Sbjct: 314 DSKTNMGKGFAYVQFKDLESVNKALLLNEKPMKSQKQEDEESKKPAKKARKLRVSRCKNM 373
Query: 417 QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHS 476
++ T D + +S K + LG +R+ ++ +GL+A K
Sbjct: 374 KKGTTAGTGSDRSSLTDSQRTKAGRAKKVLGKADRATLGQEITIEGLRAKKG-------E 426
Query: 477 GSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARA 512
GS+ +K +K R+ G K ++A +KA+A
Sbjct: 427 GSTH-LKKRKQRSATGRVTK------RSIAFKKAQA 455
>gi|148679876|gb|EDL11823.1| RNA binding motif protein 34, isoform CRA_b [Mus musculus]
Length = 432
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 46/213 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK +P T + +K A ++++ + + S+
Sbjct: 199 RTVFVGNLPVTCNKK-------------------MPAEGT-LTKKLAAIKRKFHPDQKSI 238
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E + AL N A I G IR+D A + K++VFVGNL
Sbjct: 239 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASR----------DKRSVFVGNL 288
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
P+ ++D + + F CG S+ AVR++R+P VG+G YVLF+ +A +L +K
Sbjct: 289 PYKIEDSALEEHFLDCG------SIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLN 342
Query: 403 NLKLRDRELRLSHA-------QQNCTPSKRKDV 428
N +L R+LR+ + QQN PS +KDV
Sbjct: 343 NSELMGRKLRVMRSVNKEKLKQQNSNPSLKKDV 375
>gi|344228239|gb|EGV60125.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 430
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 31/212 (14%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+T+FVGN+P+ V K F G + S+R RS+ D +PRK A QK +
Sbjct: 138 KTVFVGNVPISVVTSKPTYKRFKHLFANVGPVQSIRFRSISF-DQALPRKIAFAQKSFHA 196
Query: 281 NADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
N ++++Y+VF++ E S +A N V H+++D P K D K+TV
Sbjct: 197 NRQNINSYVVFETKEASLKAVDLLNATVFDQFHLKVDHVTHPTAK---------DNKRTV 247
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVGNL FD ++E +++ F + VE+VR++R +GKG A V F + N V
Sbjct: 248 FVGNLDFDEQEETLWKYFNA--HTANDVESVRIVRDAKTNLGKGFALVQFNDSLSVNKV- 304
Query: 400 KRRNLKLRD--------RELRLSHAQQNCTPS 423
L L D R+LR+S A+ + PS
Sbjct: 305 ----LMLHDKPIGGGSKRKLRISRAKNHAKPS 332
>gi|365758459|gb|EHN00299.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 460
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 177/396 (44%), Gaps = 82/396 (20%)
Query: 169 RDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF--DDEGKLLR 226
RDD ++ Y + KE G E +KAD + K+ F D+ K R
Sbjct: 90 RDDENENLEAHYYAKLLKEGPEGDDGKSEATRKADGPSSSTTSAAKKVDFKEDELEKAER 149
Query: 227 TIFVGN-LPLKVKKKTLIKEFIK-FGE---------------------------IDSVRI 257
T+F+GN L + K + KEF K FG I+S+R
Sbjct: 150 TVFIGNILSTVITSKKVYKEFKKLFGTNPVTKTEESDNDEEKEDAKKDNSNAFAIESIRF 209
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
RS+ D +PRK A +Q++ +++ D+V+AY+V+K+ + + N V +H+R+D
Sbjct: 210 RSISF-DEALPRKVAFVQQKFHKSRDTVNAYVVYKNRSAVRQICSNLNATVFQNHHLRVD 268
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIR 374
P AP +D K+++FVGNL F+ +E +++ F CG +E VR++R
Sbjct: 269 AVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFESCG------GIEYVRIVR 313
Query: 375 HPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-------------RDRELRLSHA--- 416
+GKG AYV FK E+ N L++ + +K + R+LR+S
Sbjct: 314 DSKTNMGKGFAYVQFKDLESVNKALLLNEKPMKSQKQEDEESKKPAKKARKLRVSRCKNM 373
Query: 417 QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHS 476
++ T D +S K + LG +R+ ++ +GL+A K
Sbjct: 374 KKGTTAGTGSDRNSLTDSQRTKAGRAKKVLGKADRATLGQEITIEGLRAKKG-------E 426
Query: 477 GSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARA 512
GS+ +K +K R+ G K ++A +KA+A
Sbjct: 427 GSTH-LKKRKQRSATGRVTK------RSIAFKKAQA 455
>gi|440803738|gb|ELR24621.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 411
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK---IPRKGAILQ 275
D E K TIFVGN+P+ V KK L + F +G+I S+R RSV K +K A L
Sbjct: 134 DAEKKKECTIFVGNVPVTVTKKELRRIFAPYGKIQSIRFRSVAFAFPKRKNGDKKAAFLG 193
Query: 276 KQINENADSVHAYIVFKSEQSTEAALAFNMAVI----GGNHIRLDRACPPRKKLKGEDAP 331
K + + D+ + Y+VF + S ALA N I G H+ +D A AP
Sbjct: 194 KHFHPDRDTCNVYVVFAEKDSALKALAANNTKIELSDGVAHLSVDLAY----------AP 243
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+++ + FVGNLPF ++DEE+ F + +V+ VR++R +GKG +V F+
Sbjct: 244 TWNMARAAFVGNLPFSIRDEELRSHF----ESAGTVKRVRIVRDSATFMGKGFGFVEFEN 299
Query: 392 REAANLVIKRRNLKLRDRELRL----SHAQQ 418
++ + +L+ R++R+ +H QQ
Sbjct: 300 KDDLLGALSLHESELQGRQIRVFKASNHQQQ 330
>gi|300176269|emb|CBK23580.2| unnamed protein product [Blastocystis hominis]
Length = 276
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 26/206 (12%)
Query: 227 TIFVGNLPLKVKKKTLI-KEFIKFGEIDSVRIRSVPI-------IDTKIPRKGAILQKQI 278
TIFV ++ V+K + + K F KFG I S+R RS+ + D K+ +K ++++ ++
Sbjct: 72 TIFVASV---VQKPSQVHKVFSKFGSIRSLRFRSISVESTPISHFDKKLLKKASVIKNKL 128
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+E+ V+AYIV++ ++S EAAL N ++ HI +DR +K E +T
Sbjct: 129 SEDKKCVNAYIVYEQKESVEAALVLNNTLLFDRHIVVDRVSKKKKPFDKERN-----HRT 183
Query: 339 VFVGNLPFDVKDEEIYQLF-CGL---------NDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+F+GNLPFD +EE+ F G+ E VE+VR+IR ++ GKG YV
Sbjct: 184 LFIGNLPFDADEEELRSFFESGMLKQKTHLEEGSHEEFVESVRLIRSKDLQKGKGFGYVT 243
Query: 389 FKTREAANLVIKRRNLKLRDRELRLS 414
K+ L + + + RELR+S
Sbjct: 244 LKSAVEMPLALLLDGKEFKGRELRVS 269
>gi|428181217|gb|EKX50082.1| hypothetical protein GUITHDRAFT_104476 [Guillardia theta CCMP2712]
Length = 358
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 37/204 (18%)
Query: 213 RKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
R+ +G ++E L RT+FVG +PL +K++ K F +FG I+SVR+RS+PI + K+P+K +
Sbjct: 104 RESDGNEEEA-LERTLFVGGVPLASTRKSIKKFFQEFGFIESVRMRSIPISNPKLPKKTS 162
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
I +N ++ +AY+ FK + S AL+ N +++ G+ I++D A +
Sbjct: 163 IALGMVNSERETCNAYVRFKEKGSVAKALSKNGSLMEGHRIKVDHANISKN--------- 213
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
Y+++ +VFVGNLPF+ R +H G YV F
Sbjct: 214 YNVRLSVFVGNLPFNA--------------------GKRFHKH-------GFGYVTFTNA 246
Query: 393 EAANLVIKRRNLKLRDRELRLSHA 416
E L +K+ K R LR+ A
Sbjct: 247 EEVQLALKKHEAKFEGRALRVVRA 270
>gi|367017858|ref|XP_003683427.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
gi|359751091|emb|CCE94216.1| hypothetical protein TDEL_0H03570 [Torulaspora delbrueckii]
Length = 419
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 145/299 (48%), Gaps = 52/299 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPR 269
D+ K RT+FVGNL +V K + KEF + I+S+R RS+ D +PR
Sbjct: 130 DELKKAERTVFVGNLSSEVITSKKVAKEFKRLFSGLEDEASVIESIRFRSISF-DEALPR 188
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGE 328
K A +Q++++++ +SV+AY+V+K + + + A A N V H+R+D P
Sbjct: 189 KVAFVQQKLHKSRESVNAYVVYKDKGAVKKACAKLNGHVFLQRHLRVDSVTHP------- 241
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
+++ K+++FVGNL F+ DE ++ F CG +E VR++R +GKG AY
Sbjct: 242 --AVHENKRSIFVGNLDFEEDDESLWLHFKDCG------EIEYVRLVRDAKTNMGKGFAY 293
Query: 387 VLFKTREAANLVIKRRNLKLRD------------RELRLSHAQQNCTPSKRKDVAPAVNS 434
+ FK ++ N + L L D R+LR+S + K +N
Sbjct: 294 IQFKDFQSVN-----KALLLNDKPMQSVKPNGPKRKLRVSRCKNIKKIVGNKTSGSKLND 348
Query: 435 PPK-KFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKG 492
K K + LG +R+ ++ +GL+A+K S V+K KK R++ G
Sbjct: 349 HHKTKIGRAKKVLGKADRATVGKELTVEGLRATKGT------GPVSSVLKKKKQRSKTG 401
>gi|296412075|ref|XP_002835753.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629543|emb|CAZ79910.1| unnamed protein product [Tuber melanosporum]
Length = 453
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 29/195 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+F+GN+P +I S+R RSV + +IPRK A + +++E +V
Sbjct: 184 RTVFLGNVPSAAISSKII----------SIRFRSVAFSE-QIPRKAAFVTHKLHEKQQTV 232
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+V+ + AL N V+ HIR+D P + D K+ VF+GNL
Sbjct: 233 NAYVVYSTPVEAREALKLNGKVVLDRHIRVDSVAHPSPQ---------DPKRCVFIGNLD 283
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
F+ ++E +++ F CG VE+VRV+R VGKG AYV F+ + + + +
Sbjct: 284 FEAQEENLWRHFGTCG------KVESVRVVRDAKTNVGKGFAYVQFEDPMSVDEALLLDS 337
Query: 404 LKL-RDRELRLSHAQ 417
K+ DR+LR+S A+
Sbjct: 338 KKMANDRKLRVSRAK 352
>gi|449278094|gb|EMC86061.1| RNA-binding protein 34, partial [Columba livia]
Length = 184
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 105/191 (54%), Gaps = 18/191 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ + L F ++G+I S+R RS+ + + +K A ++ +++ N V
Sbjct: 1 RTVFVGNLPVNCTAQELKSLFKEYGQIKSIRFRSLVPAEETLSKKLAAIKHKVHPNVKFV 60
Query: 286 HAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+AY+VFK E AL N I G HIR+D A +D K++VF+GNL
Sbjct: 61 NAYVVFKEECDAIKALNENGTEIARGFHIRVDIASKTSS---------HDNKRSVFLGNL 111
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
+D+ ++ + + F CG V AVR++R +GKG YVLF+ +A +L +K
Sbjct: 112 SYDISNDAVREHFAVCG------EVVAVRIVRDRKTGLGKGFGYVLFENTDAVHLALKLN 165
Query: 403 NLKLRDRELRL 413
+ L R++R+
Sbjct: 166 DSVLLGRKIRV 176
>gi|219119333|ref|XP_002180429.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407902|gb|EEC47837.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 393
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 22/203 (10%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK--------- 276
RT+FVGNLP + +K+L K F G+++S RIRS+ + K+P++ A QK
Sbjct: 92 RTVFVGNLPTQYNRKSLAKLFKDCGKVESSRIRSLAVTGVKLPQENAGNQKLVKKVCANT 151
Query: 277 -QINENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
Q++ A SV Y+VF ++ + E AL N ++ +R R+ YD
Sbjct: 152 SQVDTKAKSSVQGYVVFVNKDAIEKALVLN-----NTEVKDERTGTTRRIRVDHANAEYD 206
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+++FVGNLP+ ++ + + F CGLN ++ VR++R KG YVLF
Sbjct: 207 AARSIFVGNLPYTADEDSLAEHFCEGCGLN--VDDIQGVRIVRDKETFQCKGFGYVLFSD 264
Query: 392 REAANLVIKRRNLKLR-DRELRL 413
+ L ++R + L RELR+
Sbjct: 265 QSMVTLALQRMSGSLYAKRELRV 287
>gi|320580392|gb|EFW94615.1| hypothetical protein HPODL_4115 [Ogataea parapolymorpha DL-1]
Length = 345
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 149/318 (46%), Gaps = 47/318 (14%)
Query: 158 RSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEG 217
R +NK+ RKR VE + EEE + + G++ K D RKEE
Sbjct: 14 RIDNKELVARKRTLVE---------LPKTEEEERALEAGQQPNKRTKRAADFAKSRKEES 64
Query: 218 --------FD---DEGKLLRTIFVGNLPLKV---KKKT--LIKEFIKFGEIDSVRIRSVP 261
+D ++ K RTIF+GNLP + KK T L F FG+I+S+R RS
Sbjct: 65 SATTSAPKYDPVAEKEKNKRTIFIGNLPTAIMASKKSTKELKALFKPFGKIESMRFRSFA 124
Query: 262 IIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
+ + +PRK A + + ++ D+ + Y+VF+ E+ + A+ N V +H+R+D P
Sbjct: 125 V-QSNLPRKAAYILHNVKDD-DTTNCYMVFEKEEDSLKAVELNGTVFMDHHLRVDHVAQP 182
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHPHM 378
K +D K +VFVGNL F+ +E +++ F C D + + VR++R
Sbjct: 183 LK---------HDNKLSVFVGNLDFEETEESLWRFFNETCS-PDKSNVIANVRLVRDSKT 232
Query: 379 RVGKGIAYVLFKTREAANLVIKRRNLKL----RDRELRLSHAQ-QNCTPSKRKDVAPAVN 433
GKG A V F + + + +L + RELR++ + Q P K + + AV
Sbjct: 233 NYGKGFAIVQFTDTNYVSKALLQNKKELTTSKKPRELRITRCRNQTVAPVKDRKLGSAVK 292
Query: 434 SPPKKFVLDSRTLGSGNR 451
+ K VL+ G R
Sbjct: 293 A--GKVVLEGERAKKGTR 308
>gi|410078654|ref|XP_003956908.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
gi|372463493|emb|CCF57773.1| hypothetical protein KAFR_0D01270 [Kazachstania africana CBS 2517]
Length = 443
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 135/264 (51%), Gaps = 44/264 (16%)
Query: 161 NKKTKKRKRDDVEKDYVEKKY-GVIAKEEEGKKVGVGEKRKKADNET---EDMLVHRKEE 216
+KK K+K + E D++E+KY + KE+ K + K ++ +T ++ + +
Sbjct: 77 SKKRHKKKSTNDESDHLEEKYFAKLLKEDSEDKEETADLNKSSNEKTVKSQETKAKKIDL 136
Query: 217 GFDDEGKLLRTIFVGNLPLK-VKKKTLIKEFIK--------------------FGEIDSV 255
DD K RT+FVGNL + + K++ KEF F I+S+
Sbjct: 137 REDDLEKAERTLFVGNLTSEAIISKSIYKEFKNLFATIPKISEDDVETTNDEDFLVIESI 196
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIR 314
R RS+ D +PRK A ++++++++ SV+AYIV+K+++S + + A N V H++
Sbjct: 197 RFRSISF-DEALPRKVAFVRQKLHKSRQSVNAYIVYKNKKSIKPIISALNGKVFHNRHLK 255
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
+D P AP +D K+++FVGNL F+ +E ++ F CG +E VR+
Sbjct: 256 VDSVTHP--------AP-HDKKRSIFVGNLDFEEDEESLWNHFSKCG------EIEYVRI 300
Query: 373 IRHPHMRVGKGIAYVLFKTREAAN 396
IR +GKG AYV F + N
Sbjct: 301 IRDSKTNLGKGFAYVQFSDLSSVN 324
>gi|401623704|gb|EJS41793.1| nop12p [Saccharomyces arboricola H-6]
Length = 470
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 92/420 (21%)
Query: 160 ENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGF- 218
E KK KK KRDD +D + Y + E+ +K + K D + K+ F
Sbjct: 81 EPKKAKKVKRDDENEDLEARYYAKLLNEDSKEKDEKTTAKTKNDESVAPVTSAAKKVDFK 140
Query: 219 -DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------ 251
D+ K RT+F+GN L + K + K+F K FG
Sbjct: 141 EDELEKAERTVFIGNILSTVITSKKIYKDFKKLFGTSPVTKAEESENENENENENENENE 200
Query: 252 -------------IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQST- 297
I+S+R RS+ D +PRK A +Q++ +++ D+V+AYIV+K++ +
Sbjct: 201 REVAKKDNSNPFAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTVNAYIVYKNKSAVR 259
Query: 298 EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
+ N + +H+R+D P AP +D K+++FVGNL F+ +E +++ F
Sbjct: 260 QICSTLNSTLFQDHHLRVDAVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHF 310
Query: 358 --CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL------- 406
CG +E VR+IR +GKG AYV FK ++ N L++ + +K
Sbjct: 311 ESCG------DIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALLLNEKPMKSQKQEAED 364
Query: 407 ------RDRELRLSHA---QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVA 457
+ R+LR+S ++ T D +S K + LG +R+
Sbjct: 365 SKKPAKKARKLRVSRCKNMKKGTTVGAGLDRNGLTDSQRTKAGRAKKVLGKADRATLGQE 424
Query: 458 MSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKD 517
++ +GL+A K GS+ +K +K R+ G K ++A +KA+A+ K+
Sbjct: 425 ITIEGLRAKKG-------EGSTH-LKKRKQRSATGRVTK------RSIAFKKAQAEKTKE 470
>gi|431895672|gb|ELK05098.1| RNA-binding protein 34 [Pteropus alecto]
Length = 448
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 20/175 (11%)
Query: 243 IKEFIK-FGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL 301
+K F K +G+I+SVR RSV + + +K A ++++++ + +++AY+VFK E S AL
Sbjct: 221 LKSFFKEYGQIESVRFRSVIPAEGTLSKKLAAIKRKVHPDQKNINAYVVFKDENSAARAL 280
Query: 302 AFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--C 358
+ N A I G IR+D A + K++VFVGNLP+ ++ + + F C
Sbjct: 281 SRNGAQIADGFRIRVDLASETSSR----------DKRSVFVGNLPYKAEEPAVEEHFLDC 330
Query: 359 GLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G SV AVR++R P VG+G +VLF+ +A +L +K N +L R+LR+
Sbjct: 331 G------SVVAVRIVRDPRTGVGRGFGFVLFENTDAVHLALKLNNSELMGRKLRV 379
>gi|258575621|ref|XP_002541992.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902258|gb|EEP76659.1| predicted protein [Uncinocarpus reesii 1704]
Length = 565
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 150/340 (44%), Gaps = 86/340 (25%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEE--GKKVGVGE--KRKKA------DNETEDML-- 210
K++KRKR + E+ + + KEEE KK G+ KR+KA D E ED
Sbjct: 139 KSRKRKRGEREEALEDSYMRKLVKEEEKDSKKRAAGKETKRQKATSDATNDPEDEDSASG 198
Query: 211 ------------------VHRKEEG-FDDEG--KLLRTIFVGNLPL-----KVKKKTLIK 244
VH G D EG K RT+F+GN+ K KKTL+
Sbjct: 199 EETDEGDGIDGPDSNPPPVHESLSGSLDPEGLQKSARTVFLGNVSTEAIKSKAAKKTLLA 258
Query: 245 EFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKS 293
F +I+S+R RS +P++ A +K++ + S +AY+V+ +
Sbjct: 259 HLSAFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKELMDSTTQSTNAYVVYTT 318
Query: 294 EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI 353
+ A++ N ++ H+R+D P AP+ D K+ VFVGNL F DEE
Sbjct: 319 AAAARKAISLNGTIVLERHLRVDSIAHP--------API-DNKRCVFVGNLGF--VDEET 367
Query: 354 Y---------------------QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
L+ N VE+VRV+R P RVGKG AYV F+ +
Sbjct: 368 ALADGDAEKKRKKYTPPADVEEGLWRTFNQHAGPVESVRVVRDPSTRVGKGFAYVQFRDQ 427
Query: 393 ---EAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVA 429
EAA L+ ++ + R+LR+ A++ +KR DV
Sbjct: 428 NGVEAALLLDGKKFPPMLPRKLRVVRAKR--ISNKRNDVG 465
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD 283
L RT+FVGN+P ++++ L F G+I S R+RS +PRK A+ Q I+
Sbjct: 42 LRRTVFVGNVPATIRRRKLEALFRSCGKIVSSRLRSFTPAKPNLPRKAAMNQGAIHPTRR 101
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGN-----HIRLDRACPPRKKLKGE---------- 328
+ +A++VF+ + + E AL N + + H+R+DR +K++ +
Sbjct: 102 TCNAFLVFEDDVAVERALLLNGTPLETDDGSQVHMRVDRCYLAPQKMREQRTTRADTGTG 161
Query: 329 --DAPLY------------DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRV 372
AP Y D + ++F+GN+PF +EEI +F CG ++ VR+
Sbjct: 162 DAAAPSYTSPDALSAKIAWDHRHSIFIGNVPFTANEEEIRSVFSDCG------AILNVRI 215
Query: 373 IRHPHMRVGKGIAYVLFKTREAANLVIKRR-NLKLRDRELRL 413
+R +GKG AYV F +L + R ++L R LR+
Sbjct: 216 VRDAQTGMGKGFAYVTFAPEANMDLALSRHETVQLHGRLLRV 257
>gi|363749889|ref|XP_003645162.1| hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888795|gb|AET38345.1| Hypothetical protein Ecym_2633 [Eremothecium cymbalariae
DBVPG#7215]
Length = 430
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 31/230 (13%)
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGG 310
++S+R RS+ + +PRK A +Q++++++ DSV+AY+V+K S A N V G
Sbjct: 187 VESIRFRSIAF-EEPLPRKVAFVQQKLHKSRDSVNAYVVYKERSSIPVVCKALNGVVFHG 245
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVE 368
+H+R D P AP +D K++VFVGNL F+ +E +++ F CG +E
Sbjct: 246 HHLRFDSVAHP--------AP-HDKKRSVFVGNLDFEEIEENLWKHFESCG------DIE 290
Query: 369 AVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-RDRELRLSHAQQNCTPSKR 425
VR+IR P VGKG AYV F + N L++ + + + + R+LR+S C K+
Sbjct: 291 YVRIIRDPKSNVGKGFAYVQFMDAGSVNKALLLHEKKMTIGKCRKLRVSR----CKNMKK 346
Query: 426 KDVAPA-----VNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCT 470
P + K + LG+ +R+ ++ +G +ASK T
Sbjct: 347 VQPLPGKLNKLTDQQKTKIGRAKKILGNVDRATIGKKLTIEGQRASKDDT 396
>gi|195144442|ref|XP_002013205.1| GL23520 [Drosophila persimilis]
gi|194102148|gb|EDW24191.1| GL23520 [Drosophila persimilis]
Length = 434
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 27/236 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L++ +G + S+R+R+ G + + + + A S
Sbjct: 158 TVFVGNLPINTKRVQLVRLLKPYGNVKSIRLRTA----------GGKQLFKHKQRKGAGS 207
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED-APL-YDIKKTVFVG 342
++AY+V S + E ALA N NH+R+ P K G+D P D K+T+FVG
Sbjct: 208 LNAYVVLDSAEIAERALALNGTEFKENHLRV---TPAAKSESGDDKGPKDADAKRTIFVG 264
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+L + +E++ ++F CG +E +R ++ + KG+AYV FKT +A L ++
Sbjct: 265 SLKYSATEEKLREIFSSCG------EIEYIRCLQEGE-KGCKGVAYVCFKTPDAVGLALE 317
Query: 401 RRNLKLRDRELRLSHAQQNCTPSKR-KDVAPAVNSPPKKFVLDSRTLGSGNRSNSK 455
L DR + + +KR +D A A + PP K ++G+ R + K
Sbjct: 318 LNQTLLDDRPINVERYLVKKLGAKRVRDAAAAKSGPPLKSKTKQNSVGAKKRLDKK 373
>gi|198452886|ref|XP_002137558.1| GA27287 [Drosophila pseudoobscura pseudoobscura]
gi|198132120|gb|EDY68116.1| GA27287 [Drosophila pseudoobscura pseudoobscura]
Length = 429
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 27/236 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L++ +G + S+R+R+ G + + + + A S
Sbjct: 153 TVFVGNLPINTKRVQLVRLLKPYGNVKSIRLRTA----------GGKQLFKHKQRKGAGS 202
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED-APL-YDIKKTVFVG 342
++AY+V S + E ALA N NH+R+ P K G+D P D K+T+FVG
Sbjct: 203 LNAYVVLDSAEIAERALALNGTEFKENHLRV---TPAAKSESGDDKGPKDADAKRTIFVG 259
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+L + +E++ ++F CG +E +R ++ + KG+AYV FKT +A L ++
Sbjct: 260 SLKYSATEEKLREIFSSCG------EIEYIRCLQEGE-KGCKGVAYVCFKTPDAVGLALE 312
Query: 401 RRNLKLRDRELRLSHAQQNCTPSKR-KDVAPAVNSPPKKFVLDSRTLGSGNRSNSK 455
L DR + + +KR +D A A + PP K ++G+ R + K
Sbjct: 313 LNQTLLDDRPINVERYLVKKLGAKRVRDAAAAKSGPPSKSKTKPNSVGAKKRLDKK 368
>gi|50287177|ref|XP_446018.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691041|sp|Q6FUS6.1|NOP12_CANGA RecName: Full=Nucleolar protein 12
gi|49525325|emb|CAG58942.1| unnamed protein product [Candida glabrata]
Length = 396
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 57/282 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVK-KKTLIKEFIK-FGEID-----------SVRIRSVPIIDT 265
D+ K RTIFVGNL +V K+ K F K F ID S+R RSV D
Sbjct: 105 DEIEKASRTIFVGNLSNEVIISKSTYKLFQKLFNNIDDDDENKKLPIQSIRFRSVSFEDA 164
Query: 266 KIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA--FNMAVIGGNHIRLDRACPPRK 323
+PRK A +Q++++++ SV+AYIV+K + L N V H+R+D P
Sbjct: 165 -LPRKVAFVQQKLHKSRASVNAYIVYKEQSPLLNKLIKRLNGQVFSNRHLRVDSITHP-- 221
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG 381
AP +D +++VFVGNL F+ +E +++ F CG S+E VR++R P +G
Sbjct: 222 ------AP-HDKQRSVFVGNLDFEEDEESLWKHFGACG------SIEYVRIVRDPKTNMG 268
Query: 382 KGIAYVLFKTREAAN--LVIKRR-----NLKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
KG AYV F ++ + L++ + N L+ R+LR++ C ++ V P + S
Sbjct: 269 KGFAYVQFNELQSVSKALLLNEKPMISQNEHLKKRKLRVTR----CKNIRK--VEPTLKS 322
Query: 435 PPKKFVLDS---------RTLGSGNRSNSKVAMSYQGLQASK 467
K++ D + L RS ++ +G++A+K
Sbjct: 323 G--KYMTDGQKTKLGRAKKILNKAERSKLLKELTVEGIRATK 362
>gi|323303035|gb|EGA56838.1| Nop12p [Saccharomyces cerevisiae FostersB]
Length = 459
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 80/348 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-------------RDREL 411
+E VR+IR +GKG AYV FK ++ N L++ + +K + R+L
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALLLNEKPMKSQKQEDENTKKPTKKARKL 364
Query: 412 RLSHA---QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKS 468
R+S ++ T D +S + + LG +R+ ++ +GL+A K
Sbjct: 365 RVSRCKNMKKGTTIGTGLDRNXLTDSQRTRAGRAKKILGKADRATLGQEITIEGLRAKKG 424
Query: 469 CTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPK 516
GS+ +K KK R+ G K ++A +KA+A+ K
Sbjct: 425 -------EGSTH-LKKKKQRSATGRVTK------RSIAFKKAQAEKSK 458
>gi|6324532|ref|NP_014601.1| Nop12p [Saccharomyces cerevisiae S288c]
gi|74676462|sp|Q08208.1|NOP12_YEAST RecName: Full=Nucleolar protein 12
gi|1419839|emb|CAA99043.1| unnamed protein product [Saccharomyces cerevisiae]
gi|207341353|gb|EDZ69435.1| YOL041Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273915|gb|EEU08834.1| Nop12p [Saccharomyces cerevisiae JAY291]
gi|259149444|emb|CAY86248.1| Nop12p [Saccharomyces cerevisiae EC1118]
gi|285814848|tpg|DAA10741.1| TPA: Nop12p [Saccharomyces cerevisiae S288c]
gi|323346597|gb|EGA80883.1| Nop12p [Saccharomyces cerevisiae Lalvin QA23]
gi|349581127|dbj|GAA26285.1| K7_Nop12p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763209|gb|EHN04739.1| Nop12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 459
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 80/348 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-------------RDREL 411
+E VR+IR +GKG AYV FK ++ N L++ + +K + R+L
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALLLNEKPMKSQKQEDENTKKPTKKARKL 364
Query: 412 RLSHA---QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKS 468
R+S ++ T D +S + + LG +R+ ++ +GL+A K
Sbjct: 365 RVSRCKNMKKGTTIGTGLDRNGLTDSQRTRAGRAKKILGKADRATLGQEITIEGLRAKKG 424
Query: 469 CTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPK 516
GS+ +K KK R+ G K ++A +KA+A+ K
Sbjct: 425 -------EGSTH-LKKKKQRSATGRVTK------RSIAFKKAQAEKSK 458
>gi|151945592|gb|EDN63833.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
Length = 459
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 80/348 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 IAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-------------RDREL 411
+E VR+IR +GKG AYV FK ++ N L++ + +K + R+L
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALLLNEKPMKSQKQEDENTKKPTKKARKL 364
Query: 412 RLSHA---QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKS 468
R+S ++ T D +S + + LG +R+ ++ +GL+A K
Sbjct: 365 RVSRCKNMKKGTTIGTGLDRNGLTDSQRTRAGRAKKILGKADRATLGQEITIEGLRAKKG 424
Query: 469 CTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPK 516
GS+ +K KK R+ G K ++A +KA+A+ K
Sbjct: 425 -------EGSTH-LKKKKQRSATGRVTK------RSIAFKKAQAEKSK 458
>gi|367004328|ref|XP_003686897.1| hypothetical protein TPHA_0H02600 [Tetrapisispora phaffii CBS 4417]
gi|357525199|emb|CCE64463.1| hypothetical protein TPHA_0H02600 [Tetrapisispora phaffii CBS 4417]
Length = 458
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 180/392 (45%), Gaps = 95/392 (24%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKAD-NETED-----------MLVHRKEEG 217
DD+E Y Y + KE++ + +KR K+D ++ ED ++ KEE
Sbjct: 92 DDLESKY----YAKLIKEDDTE-----DKRNKSDLSDKEDDAPKEKTAAAAKILDLKEEE 142
Query: 218 FDDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFG-------------------------E 251
+ K +TIF+GN+P V K + KEF K E
Sbjct: 143 LE---KARKTIFIGNVPNTVIGNKNIYKEFKKLFSTNPKKDEEAKEEEEKTDEKKVNKFE 199
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGG 310
I+S+R RS+ + +PRK A +++++++ DSV+AYI++K+++ + N +
Sbjct: 200 IESIRFRSISF-EEMLPRKIAYVKQKLHKTRDSVNAYIIYKNKKVIKTITKNLNGYIFHD 258
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV 370
+H+R+D P +D K+++FVGNL F+ +E +++ F + +E V
Sbjct: 259 HHLRVDSVSHP---------TAHDNKRSLFVGNLDFEEAEETLWRHFAKAGE----IEYV 305
Query: 371 RVIRHPHMRVGKGIAYVLFKTREAANL--------VIKRRNLKLRDRELRLSHAQQNCTP 422
RV+R VGKG AYV FK ++ N +I + + R+LR++ +
Sbjct: 306 RVVRDSKTNVGKGFAYVQFKDFQSVNKALLLDGKPMINKNKPDKKARKLRITRCK----- 360
Query: 423 SKRKDVAPAVN---------SPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASK----SC 469
+ K A A+N + KF + LG +R+ ++ +G +A+K S
Sbjct: 361 NMHKVAASAINGKITKKLNENQKTKFGRAKKILGKADRATVGTELTIEGARATKGQGVSL 420
Query: 470 TQKKVHSGSSGVVK----MKKSRTQKGERPKV 497
+KK S S V K KK+++++ PK
Sbjct: 421 RRKKQRSVSGRVTKRSQAFKKAQSEEDAHPKA 452
>gi|444314259|ref|XP_004177787.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
gi|387510826|emb|CCH58268.1| hypothetical protein TBLA_0A04750 [Tetrapisispora blattae CBS 6284]
Length = 473
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 67/318 (21%)
Query: 219 DDEGKLLRTIFVGNLPLKV-KKKTLIKEFIKFG--------------------------- 250
D+ K RTIF+GNLP V K + KEF K
Sbjct: 161 DELEKAERTIFIGNLPNSVITSKDIYKEFKKLFMRNPNPEDKQDNKKKNAKEEEKEKENP 220
Query: 251 -EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQST-EAALAFNMAVI 308
I+S+R RS+ D +PRK A +Q++ ++ DSV+AYIV+K ++ + A N
Sbjct: 221 FAIESIRFRSISF-DEALPRKVAFVQQKFHKLRDSVNAYIVYKRRKAVKQIAKHLNGMEF 279
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVE 368
H+R+D P +++ K+++FVGNL F+ +E +++ F D +E
Sbjct: 280 HDRHLRVDSVAHP---------SVHENKRSIFVGNLDFEEDEENLWKHFLSCGD----IE 326
Query: 369 AVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRD----RELRLSHAQQNCTP 422
VR++R +GKG AYV FK ++ N L++ + + +D R+LR++ +
Sbjct: 327 YVRIVRDSKTNLGKGFAYVQFKDLQSVNKALLLADKVMIKKDGKKGRKLRVTRCKNMHKN 386
Query: 423 SKRKDVAPAVNSPPKKFVLDSRT--------LGSGNRSNSKVAMSYQGLQASKSCTQKKV 474
S D K + RT LG +++ ++ +GL+++K
Sbjct: 387 S--HDSNSVTRKFEKNLTDNQRTKVGRVKKILGKADKATLGSQITIEGLRSTKG------ 438
Query: 475 HSGSSGVVKMKKSRTQKG 492
+ S+ +K KK R++ G
Sbjct: 439 -NSSASHLKQKKQRSKTG 455
>gi|365982827|ref|XP_003668247.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
gi|343767013|emb|CCD23004.1| hypothetical protein NDAI_0A08510 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 68/294 (23%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEFIKFGE-------------------------------ID 253
RT+F+GN+P V KT+ K F K I+
Sbjct: 165 RTVFIGNIPNDVITSKTVYKTFKKLFNTNPKPKKSEDEDDDEEKQEDIESKIKENPFTIE 224
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNH 312
S+R RS+ D +PRK A +Q++++++ DSV+AYIV+K++ + + N V +H
Sbjct: 225 SIRFRSISF-DEALPRKVAFVQQKLHKSRDSVNAYIVYKNKNIVKTICSELNGTVFHNHH 283
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAV 370
+R+D P + D K+++FVGNL F+ +E ++ F CG +E V
Sbjct: 284 LRVDSVAHPSAQ---------DKKRSIFVGNLDFEEAEESLWNHFKSCG------EIEYV 328
Query: 371 RVIRHPHMRVGKGIAYVLFKTREAAN-------LVIKRRNL----KLRDRELRLSHAQQ- 418
R+IR +GKG AYV FK ++ N V+ + N+ K + R+LR++ +
Sbjct: 329 RIIRDAKTNMGKGFAYVQFKELQSVNKALLLNDKVMMKSNVDKDSKKKGRKLRVTRCKNM 388
Query: 419 -----NCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASK 467
+ S K+ + K + LG +R+ ++ +GL+A+K
Sbjct: 389 RKNGSQSSSSNFKNSGNLSDFQKTKVGRAKKILGKADRATLGQELTIEGLRATK 442
>gi|190407303|gb|EDV10570.1| nucleolar protein 12 [Saccharomyces cerevisiae RM11-1a]
Length = 459
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 48/210 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+E VR+IR +GKG AYV FK ++ N
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVN 334
>gi|392296290|gb|EIW07392.1| Nop12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 459
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 80/348 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++ YIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINTYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL-------------RDREL 411
+E VR+IR +GKG AYV FK ++ N L++ + +K + R+L
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKALLLNEKPMKSQKQEDENTKKPTKKARKL 364
Query: 412 RLSHA---QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKS 468
R+S ++ T D +S + + LG +R+ ++ +GL+A K
Sbjct: 365 RVSRCKNMKKGTTIGTGLDRNGLTDSQRTRAGRAKKILGKADRATLGQEITIEGLRAKKG 424
Query: 469 CTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPK 516
GS+ +K KK R+ G K ++A +KA+A+ K
Sbjct: 425 -------EGSTH-LKKKKQRSATGRVTK------RSIAFKKAQAEKSK 458
>gi|323352349|gb|EGA84884.1| Nop12p [Saccharomyces cerevisiae VL3]
Length = 346
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 48/210 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 129 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 188
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 189 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 247
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 248 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 292
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+E VR+IR +GKG AYV FK ++ N
Sbjct: 293 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVN 322
>gi|323335669|gb|EGA76952.1| Nop12p [Saccharomyces cerevisiae Vin13]
Length = 358
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 48/210 (22%)
Query: 219 DDEGKLLRTIFVGN-LPLKVKKKTLIKEFIK-FGE------------------------- 251
D+ K RT+F+GN L + K + KEF K FG
Sbjct: 141 DELEKAERTVFIGNILSTVITSKKVYKEFKKLFGTNPIAETEESGNEKEEESSKKSDNNE 200
Query: 252 --IDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVI 308
I+S+R RS+ D +PRK A +Q++ +++ D+++AYIV+K++ + + N V
Sbjct: 201 FAIESIRFRSISF-DEALPRKVAFVQQKFHKSRDTINAYIVYKNKSAVRKICSNLNAVVF 259
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESS 366
+H+R+D P AP +D K+++FVGNL F+ +E +++ F CG
Sbjct: 260 QDHHLRVDSVAHP--------AP-HDKKRSIFVGNLDFEEIEESLWKHFEPCG------D 304
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+E VR+IR +GKG AYV FK ++ N
Sbjct: 305 IEYVRIIRDSKTNMGKGFAYVQFKDLQSVN 334
>gi|340383699|ref|XP_003390354.1| PREDICTED: RNA-binding protein 34-like [Amphimedon queenslandica]
Length = 305
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA-ILQKQINENADSVH 286
+F+GN+PL KKK ++K FG ++S+R RSV + K+P + A L KQ+ + +
Sbjct: 61 VFIGNVPLSTKKKDILKLVSPFGPVESLRQRSVVVSPGKLPVEVARKLGKQL--TGTTTN 118
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+V ++E+S A L N + G HIR+D A P D +VFVGN+PF
Sbjct: 119 FYVVMETEESASACLELNGREVDGRHIRVDLATPTN-----------DTHCSVFVGNVPF 167
Query: 347 DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RN 403
+E++ ++F CG ++ +R+I+ + KG AYV FK + K+
Sbjct: 168 GTDEEKLRKVFESCG------PIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACKKNER 221
Query: 404 LKLRDRELRLSHAQQN 419
+++ R+LR+ + +
Sbjct: 222 IEVEGRKLRIFRCRSD 237
>gi|401407368|ref|XP_003883133.1| hypothetical protein NCLIV_028890 [Neospora caninum Liverpool]
gi|325117549|emb|CBZ53101.1| hypothetical protein NCLIV_028890 [Neospora caninum Liverpool]
Length = 687
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 17/225 (7%)
Query: 205 ETEDMLVHRKEEGF--DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSV 260
+ ED E G+ D+ K RT+FVGNLPL K + + + G +++S+R+RS+
Sbjct: 427 DDEDSGAGEAEAGWRETDKEKERRTVFVGNLPLSGWKPPALYKHLGIGRKDVESIRLRSI 486
Query: 261 PII-DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
P+ R G I+Q Q + D +AYIV K + A L + + +R+D A
Sbjct: 487 PVHPKFNKCRLGGIVQGQFTDLKDFQNAYIVLKDRKLVRAVLQHDGSTFQDRRLRVDEAG 546
Query: 320 PPRKKLKGEDA-PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHM 378
+G++ +D KKTVFVGNLP +E++ + + +V+AVR+IR
Sbjct: 547 E-----RGQNVFSRFDRKKTVFVGNLPARCSEEDLRKAL----ECNGAVKAVRIIRDKVT 597
Query: 379 RVGKGIAYVLFKTREAANLVIKRRN--LKLRDRELRLSHAQQNCT 421
KG +V F+ R +A + N L+ R LR++ A T
Sbjct: 598 TESKGFGFVCFEDRVSAARAVLASNGVASLQGRALRVTRALDEVT 642
>gi|194740804|ref|XP_001952880.1| GF17498 [Drosophila ananassae]
gi|190625939|gb|EDV41463.1| GF17498 [Drosophila ananassae]
Length = 325
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 28/220 (12%)
Query: 199 RKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIR 258
RK+ ++M + K + DE T+FVGNLP+ K+ L++ F +G + S+R+R
Sbjct: 34 RKQQPGPADNMGMEYKRDPATDEA----TVFVGNLPINTKRVQLVRLFQPYGVVQSIRLR 89
Query: 259 SVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA 318
+ K KQ E A S++AY+V ++ Q E+ALA N NH+R+
Sbjct: 90 TA-------GGKQLFKHKQRKE-AGSLNAYVVLQTPQIAESALALNGFEFKDNHLRV--- 138
Query: 319 CPPRKKLK---GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVI 373
P KK+K E+ D K TVFVGNL + ++ ++ +F CG+ ++ +R +
Sbjct: 139 -TPAKKVKRDGSEEVNEGDSKNTVFVGNLKYSTNEKMLHDIFSSCGV------IDYIRCL 191
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
R + KG+AYV FK ++ L ++ L DR + +
Sbjct: 192 RDGE-KGCKGVAYVCFKNSDSVGLALELNQTLLDDRPINV 230
>gi|254567033|ref|XP_002490627.1| Nucleolar protein, required for pre-25S rRNA processing
[Komagataella pastoris GS115]
gi|238030423|emb|CAY68347.1| Nucleolar protein, required for pre-25S rRNA processing
[Komagataella pastoris GS115]
gi|328351015|emb|CCA37415.1| Nucleolar protein 12 [Komagataella pastoris CBS 7435]
Length = 445
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 22/173 (12%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
RT+FVGNLP+ V +K+ + K G ++S+R RS+ +PR+ A L K +E
Sbjct: 155 RTVFVGNLPVIVAIEREEKEEFKEYMAKIGPVESIRFRSIAF-KLPMPRRDAFLSKAFDE 213
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+++AY+V++++ ++ A N V +H+R+D P +P D KK++F
Sbjct: 214 TRSALNAYVVYENKNDSKKAKELNGKVFKDHHLRVDHVAHP--------SP-QDNKKSIF 264
Query: 341 VGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+GNL F+ ++E +++ F G + VE VR+IR GKG A V FK
Sbjct: 265 IGNLDFEEEEESLWKYFTEKVG----QDKVENVRIIRDTKTNFGKGFAMVQFK 313
>gi|119195671|ref|XP_001248439.1| hypothetical protein CIMG_02210 [Coccidioides immitis RS]
gi|392862354|gb|EAS37006.2| nucleolar protein 12 [Coccidioides immitis RS]
Length = 556
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 145/338 (42%), Gaps = 83/338 (24%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGVIAKEEEG----KKVGVGEKRKKADN----ETEDMLVHR 213
+K++KRKR + E D E IAKEEE + EKR++ D ++E
Sbjct: 129 EKSQKRKRHEAEDDLEESYMRKIAKEEEKDRKKRAAAKNEKRQRTDESPAVDSEAGSSGP 188
Query: 214 KEEGFDDEG--------------------------KLLRTIFVGN-----LPLKVKKKTL 242
E+ D+E K RT+F+GN + K KK L
Sbjct: 189 DEQKDDEESESDQEDKGPPPVHESLANTAEAAALEKSNRTVFLGNVSSEAIKSKSSKKAL 248
Query: 243 IKEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVF 291
+ F +I+S+R RS +P++ A +K + + S +AY+V+
Sbjct: 249 LAHLSSFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKDLMDSTTRSTNAYVVY 308
Query: 292 KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF----- 346
+ + AL+ N + H+R+D P AP+ D K+ VFVGNL F
Sbjct: 309 TTAAAARKALSLNGTTVLDRHLRVDSIAHP--------API-DHKRCVFVGNLGFVDEEA 359
Query: 347 --DVKDEEIYQ------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
D+E + L+ N+ VE+VRV+R P RVGKG AYV F +
Sbjct: 360 AASTDDQEKKRKKSATPSDVEEGLWRTFNENAGRVESVRVVRDPSTRVGKGFAYVQFHDQ 419
Query: 393 ---EAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKD 427
EAA L+ ++ + R+LR+ A++ T KR D
Sbjct: 420 NGVEAALLLDGKKFPPMLPRKLRVVRAKR--TAKKRND 455
>gi|407929215|gb|EKG22050.1| Nucleotide-binding alpha-beta plait [Macrophomina phaseolina MS6]
Length = 436
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 129/293 (44%), Gaps = 77/293 (26%)
Query: 158 RSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKK---------------- 201
+S+ K+ +K DD+E Y+ K AKEE ++ KR+K
Sbjct: 28 KSQRKRKRKGDEDDLEDVYMRKLAREEAKEEARRQAERSTKRQKKEDGEAAEDSEEALSD 87
Query: 202 ----ADNETEDMLVHRKEEGFDDEG-----KLLRTIFVGNLPLKV-----KKKTLIKEFI 247
D E+E + + + + +G K RT+FVGN+ +K KKTL+K
Sbjct: 88 DDGDLDTESESEVPQHEIKASEQKGDPELEKASRTVFVGNVSVKAVSDKSAKKTLVKHMS 147
Query: 248 KF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQS 296
F + +S+R RS P T +P+K A +K+I E S +AY+V+ ++Q+
Sbjct: 148 SFLPELPEHKPPHKFESIRFRSTPF-STYVPKKAAFAKKEILEETTHSTNAYVVYSTQQA 206
Query: 297 T-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ 355
EAA N ++ HIR+D P K D ++ VFVGNL F V DE + Q
Sbjct: 207 AREAARRLNGTIVLERHIRVDEVAHPAK---------TDHRRCVFVGNLGF-VDDESMIQ 256
Query: 356 -----------------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIA 385
L+ + +VE+VRV+R P RVGKG A
Sbjct: 257 EAESKRIGKEIRKRKEPGDVEEGLWRTFGKV-GTVESVRVVRDPKTRVGKGFA 308
>gi|398410594|ref|XP_003856645.1| hypothetical protein MYCGRDRAFT_30158, partial [Zymoseptoria
tritici IPO323]
gi|339476530|gb|EGP91621.1| hypothetical protein MYCGRDRAFT_30158 [Zymoseptoria tritici IPO323]
Length = 298
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 112/233 (48%), Gaps = 43/233 (18%)
Query: 212 HRKEEGFDDE-GKLLRTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEI 252
H E DDE K RT+F+GN+ KV +K L+ F ++
Sbjct: 17 HETETAADDELQKANRTVFLGNVSTSAIISKVARKALLSHLASFFTDLPETKKGDAKPKV 76
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVIGG 310
+S+R RS P + IP+K A +K++ + S +AY V+ + + EA N +
Sbjct: 77 ESLRFRSTPFA-SAIPKKAAFAKKELMDATTKSTNAYAVYSTPALAREACTRLNGTSVLA 135
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEE-IYQLF--CGLNDLESSV 367
H+R+D P K D + +F+GNL F EE +++ F CG +V
Sbjct: 136 RHMRVDSVAHPAK---------VDNHRCIFIGNLGFPADVEEGLWRTFSKCG------TV 180
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
E+VRVIR RVGKGIAYV F EAA L +++ + R+LR++ A+
Sbjct: 181 ESVRVIRDSTTRVGKGIAYVQFTDENAVEAALLYNEKKFPPMLPRKLRVTRAK 233
>gi|303321530|ref|XP_003070759.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110456|gb|EER28614.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 557
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 143/341 (41%), Gaps = 91/341 (26%)
Query: 163 KTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNE----TEDMLVHRKEEGF 218
K++KRKR + E D E IAKEEE + +KR A NE T++ E G
Sbjct: 132 KSRKRKRHEAEDDLEESYMRKIAKEEEKDR----KKRAAAKNEKRQRTDESPAADSEAGS 187
Query: 219 D--DEGKLL--------------------------------RTIFVGN-----LPLKVKK 239
DE K RT+F+GN + K K
Sbjct: 188 SGPDEQKDDEESESDQEDEGPPPVHESLANTAEAAALEKSNRTVFLGNVSSEAIKSKSSK 247
Query: 240 KTLIKEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAY 288
K L+ F +I+S+R RS +P++ A +K + + S +AY
Sbjct: 248 KALLAHLSSFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKDLMDSTTRSTNAY 307
Query: 289 IVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF-- 346
+V+ + + AL+ N + H+R+D P AP+ D K+ VFVGNL F
Sbjct: 308 VVYTTAAAARKALSLNGTTVLDRHLRVDSIAHP--------API-DHKRCVFVGNLGFVD 358
Query: 347 -----DVKDEEIYQ------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
D+E + L+ N+ VE+VRV+R P RVGKG AY+ F
Sbjct: 359 EEAAASTDDQEKKRKKSATPSDVEEGLWRTFNENAGRVESVRVVRDPSTRVGKGFAYIQF 418
Query: 390 KTR---EAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKD 427
+ EAA L+ ++ + R+LR+ A++ T KR D
Sbjct: 419 HDQNGVEAALLLDGKKFPPMLPRKLRVVRAKR--TAKKRND 457
>gi|71745848|ref|XP_827554.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831719|gb|EAN77224.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 429
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK-------------IPRKGA 272
RT+FVGNL VK++ L K F G I+SVRIR+ + K + R
Sbjct: 132 RTVFVGNLVNDVKRRVLEKVFKTCGPIESVRIRAQALEGEKDLNGGEATVQPRGVGRAIR 191
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+L+ + + S AY++FK + S + AL N V+ G HI + P ++
Sbjct: 192 VLRGDVKKGEQYSAVAYVLFKDKSSIKEALDKNGVVVEGRHIVVTTLDPEGRE------- 244
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFC--GLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
Y + +VFVGN+ +D +E ++ F G+ D V+ VR++R + KG YV F
Sbjct: 245 -YAPETSVFVGNVAYDSNEEALWNFFVEKGIRD----VKRVRLVRDRESGMCKGFGYVEF 299
Query: 390 KTREAANLVIKRRNLKLRDRELRLSHAQQN 419
+++ + I R DRE+R+ H Q++
Sbjct: 300 QSKGSVAAAIALRGTLFMDREIRIVHVQKS 329
>gi|261331756|emb|CBH14750.1| DRBD9 [Trypanosoma brucei gambiense DAL972]
Length = 429
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK-------------IPRKGA 272
RT+FVGNL VK++ L K F G I+SVRIR+ + K + R
Sbjct: 132 RTVFVGNLVNDVKRRVLEKVFKTCGPIESVRIRAQALEGEKDLNGGEATVQPKGVGRAIR 191
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+L+ + + S AY++FK + S + AL N V+ G HI + P ++
Sbjct: 192 VLRGDVKKGEQYSAVAYVLFKDKSSIKEALDKNGVVVEGRHIVVTTLDPEGRE------- 244
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFC--GLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
Y + +VFVGN+ +D +E ++ F G+ D V+ VR++R + KG YV F
Sbjct: 245 -YAPETSVFVGNVAYDSNEEALWNFFVEKGIRD----VKRVRLVRDRESGMCKGFGYVEF 299
Query: 390 KTREAANLVIKRRNLKLRDRELRLSHAQQN 419
+++ + I R DRE+R+ H Q++
Sbjct: 300 QSKGSVAAAIALRGTLFMDREIRIVHVQKS 329
>gi|340897413|gb|EGS17003.1| hypothetical protein CTHT_0073280 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 623
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 111/240 (46%), Gaps = 57/240 (23%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGE--------IDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KK L+K + I+S+R RS P TKIPR+ A
Sbjct: 237 RTVFLSNVSVEAIKDRKAKKILLKHLASPLDKKADPPQKIESIRFRSTPFGTTKIPRRVA 296
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K+I E S +AY+V+ + + A+ N ++ H+R D P A
Sbjct: 297 YIKKEIMEGTTKSTNAYVVYSTAAAARLAVQHLNGTIVLDRHLRADSVAHP--------A 348
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ-------------------------LFCGLNDLES 365
P+ D ++ VFVGNL F V DE +Y+ L+ +
Sbjct: 349 PI-DNRRCVFVGNLGF-VDDESVYRTKVEDGKLVTEKKKKGKEPSDVEEGLWRVFGEHAG 406
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQQNCTP 422
VE+VRV+R P RVGKG AYV F + E+A L+ + L RELR+S C P
Sbjct: 407 KVESVRVVRDPATRVGKGFAYVQFYDPNSVESALLLNGKSFPPLLPRELRVSR----CKP 462
>gi|195453715|ref|XP_002073909.1| GK12898 [Drosophila willistoni]
gi|194169994|gb|EDW84895.1| GK12898 [Drosophila willistoni]
Length = 421
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 20/233 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN-ENADSV 285
T+FVGNLP+ K+ LI+ F +G ++S+R+R+ G +L K ++A S+
Sbjct: 149 TVFVGNLPINTKRVQLIRLFEPYGTVNSIRLRTAG---------GKLLFKHKQRKSAGSL 199
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+V +S + + AL N NH+R+ A + + D K+ VFVGNL
Sbjct: 200 NAYVVLQSPEVAQKALTLNGTEFKENHLRVTLATQTGAGDGDKASSDADAKRCVFVGNLK 259
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+ +++++ +F CG ++ +R ++ + G+AYV FK +A L ++
Sbjct: 260 YSATEKKLHDVFSSCG------EIDNIRCLQD-GTKGCSGVAYVNFKNADAVGLALELNQ 312
Query: 404 LKLRDRELRLS-HAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSK 455
+ DR + + ++ + +++D A A P KK LG+ R + K
Sbjct: 313 TLIDDRPINVERYSVKKLGAKQQRDAAAASAPPVKKSKAKQNALGATKRLDKK 365
>gi|342183672|emb|CCC93152.1| putative RNA binding protein [Trypanosoma congolense IL3000]
Length = 423
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDT-------------KIPRKGA 272
RT+FVGNL VK++T+ K F G I+S+RIR ++D K+ R
Sbjct: 127 RTVFVGNLVNDVKRRTVEKIFKSCGTIESLRIRGQAVVDEGGVDENGTNARQRKVGRAIH 186
Query: 273 ILQKQINENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+L+ + + S AY++FK + S + AL N V+ G HI + P ++
Sbjct: 187 VLRGDVKKGEHYSAVAYVLFKDKSSIQEALKKNGIVVEGRHIVVTTMDPESRE------- 239
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
Y + +VF+GN+ +D +E + F L+ V+ +R++R KG YV F++
Sbjct: 240 -YAPETSVFIGNIAYDTNEEAVRNFFVERGILD--VKRIRLVRDRSTGDCKGFGYVEFES 296
Query: 392 REAANLVIKRRNLKLRDRELRLSHAQQN 419
+ + I R DRE+R+ H Q++
Sbjct: 297 KSSVPRAIAVRGSLFCDREIRIVHVQKS 324
>gi|307190796|gb|EFN74665.1| RNA-binding protein 34 [Camponotus floridanus]
Length = 433
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIF+ N+P K+ + K F KFG I+++R R++ + K+ +K A + KQI+ +V
Sbjct: 151 KTIFIDNIPKDTKEAEIKKVFSKFGPINNLRFRNIVPQNLKMSKKVAAITKQIHPKVTTV 210
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
YI +KS++S + AL+ N + GN+I + K +K E ++ KK VF+ NL
Sbjct: 211 VVYINYKSKESAQKALSMNGKIFQGNYIHVQIVSD--KSMKKE----WNNKKAVFIANLR 264
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+ + I++ F CG +E+V ++R KG Y+ F A ++
Sbjct: 265 YGTDNNTIWKHFGICG------DIESVHLVRDKETGQTKGFGYINFIDENAVLCALELDG 318
Query: 404 LKLRDRELRLSHAQQNCTPSK-RKDVAPAVN 433
++ +R +R+ + N K RK P+ N
Sbjct: 319 TEIMNRPVRVEPYKINSANKKGRKRDCPSNN 349
>gi|302310751|ref|XP_455433.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|223590101|sp|Q6CKV6.2|NOP12_KLULA RecName: Full=Nucleolar protein 12
gi|199425080|emb|CAG98141.2| KLLA0F07799p [Kluyveromyces lactis]
Length = 462
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 73/312 (23%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEF-------------------------------IKFGEID 253
RTIF+GN+P +V K + KEF +KF ++
Sbjct: 164 RTIFIGNVPNEVITSKKVYKEFKKLLSKDPRSENDDHDDGEEDEEEEESKTKDVKFN-VE 222
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAF-NMAVIGGNH 312
S+R RS+ + +PRK A + ++++++ DS++AY V+ S + + N V +H
Sbjct: 223 SIRFRSIAF-EEALPRKVAFVHQKLHKSRDSINAYAVYGSSNPVKIMCQYLNGKVFNDHH 281
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAV 370
+R+D P +P +D +++VFVGNL F+ +E +++ F CG +E V
Sbjct: 282 LRVDSVTHP--------SP-HDKRRSVFVGNLDFEEVEESLWKHFEPCG------DIEYV 326
Query: 371 RVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRD----RELRLSH------AQQNC 420
R+IR +GKG AYV FK ++ + + K+ + R+LR+S AQ N
Sbjct: 327 RIIRDSKTNMGKGFAYVQFKDFQSVSKALLLHEKKIHEGKKARKLRISRCKNMRKAQGNQ 386
Query: 421 TPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGSSG 480
+ + + + K + LG +R+ ++ +GL+ASK T +
Sbjct: 387 SSLQNNKLN---DQQRTKLGRAKKVLGKADRAKLGEELTIEGLRASKGET--------TP 435
Query: 481 VVKMKKSRTQKG 492
V+K K+R++ G
Sbjct: 436 VLKRTKNRSKTG 447
>gi|195390115|ref|XP_002053714.1| GJ23196 [Drosophila virilis]
gi|194151800|gb|EDW67234.1| GJ23196 [Drosophila virilis]
Length = 439
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
TIFVGNLP+ K+ L++ FG + S+R+R+ G + + + + A S
Sbjct: 160 TIFVGNLPINTKRVQLVRLLQPFGTVHSIRLRTA----------GGKQLFKHKQRKGAGS 209
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKL--KGEDAPL--YDIKKTVF 340
++AY+V S E ALA N NH+R+ A R + G D D+K+TVF
Sbjct: 210 LNAYVVLDSAVIAEKALALNGTEFKENHLRVTPAAQVRGAVGAAGNDQASNDADVKRTVF 269
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VGNL + ++++ ++F CG ++ +R ++ + KG+AYV F+ +A L
Sbjct: 270 VGNLKYTASEQKLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQKPDAVGLA 322
Query: 399 IKRRNLKLRDRELRL 413
++ L DR + +
Sbjct: 323 LELNETLLDDRPIHV 337
>gi|194880593|ref|XP_001974476.1| GG21761 [Drosophila erecta]
gi|190657663|gb|EDV54876.1| GG21761 [Drosophila erecta]
Length = 455
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 31/252 (12%)
Query: 172 VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVG 231
++K+ +E K ++ K + KV K+ KA+N+ E+ + ++E DE T+FVG
Sbjct: 129 IKKEKLEDKPTIVPKAKAKGKV---TKKAKANNKNEEGV--KRERNPADEA---STVFVG 180
Query: 232 NLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADSVHAYI 289
NLP+ K+ L+K F +G + S+R+R+ G + + + + A S++AY+
Sbjct: 181 NLPINTKRVQLVKLFQPYGLVQSIRLRTA----------GGKQLFKHKQRKGAGSLNAYV 230
Query: 290 VFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVGNLPFD 347
V ++ + ALA N NH+R+ A +G+D D K+T+FVG+L +
Sbjct: 231 VLQNPDIAKQALAMNGTEFKENHLRVTPAAKAEGFGQGKDEQPNDKDAKRTIFVGSLKYS 290
Query: 348 VKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+E++ ++F CG ++ +R ++ KG+AYV F+ +A L ++
Sbjct: 291 ANEEQLREIFSSCG------EIDYIRCLQDGDKGC-KGVAYVCFQKPDAVGLALELNQTL 343
Query: 406 LRDRELRLSHAQ 417
L DR + + Q
Sbjct: 344 LDDRPINVERYQ 355
>gi|167377342|ref|XP_001734363.1| nucleolar protein [Entamoeba dispar SAW760]
gi|165904154|gb|EDR29480.1| nucleolar protein, putative [Entamoeba dispar SAW760]
Length = 422
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 185 RTVFIANINIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 244
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ + E++ +AA N G H+R D K +I+KT+FVGN
Sbjct: 245 QNCYAVYSTPEEAEKAAKEINGKEFLGYHLRADWEVNKGMKR--------NIRKTIFVGN 296
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPF +++E++ F + ++ES V+++R +G+GI +V F +E +
Sbjct: 297 LPFKMEEEQLRHFFSKVGEIES----VKIVRESKSGMGRGIGFVTFTNKEDVQKGLNMVG 352
Query: 404 LKLRDRELRLSHAQQNCTPSKRK 426
K++ R++R+ +N K+K
Sbjct: 353 EKIKGRQIRVEPCYKNYDKIKQK 375
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L F K GEI+SV+I
Sbjct: 288 IRKTIFVGNLPFKMEEEQLRHFFSKVGEIESVKI 321
>gi|453089190|gb|EMF17230.1| hypothetical protein SEPMUDRAFT_146322 [Mycosphaerella populorum
SO2202]
Length = 565
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 66/256 (25%)
Query: 212 HRKEEGFDDE-GKLLRTIFVGNLPL-----KVKKKTLIKEFIKF------------GEID 253
H EE D E K RT+FVGN+ K +K L+ F +++
Sbjct: 196 HETEEAKDIELDKANRTVFVGNVSTTAISSKPARKALLVHLASFFPTQSSVKAGPKPKVE 255
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVIGGN 311
S+R RS P + IP+K A +K++ + + S +AY+V+ + + EA + N V+
Sbjct: 256 SIRFRSTPYA-SAIPKKAAFAKKELMDATSKSTNAYVVYSTPSLAREACKSLNGTVVLDR 314
Query: 312 HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF-----DVKD---------------- 350
H+R+D P K D ++ VFVGNL F +++D
Sbjct: 315 HLRVDSVAHPAK---------VDNRRCVFVGNLGFVDDESNIQDANEDDGREKRKRGKEP 365
Query: 351 ----EEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKR 401
E +++ F CG +VE+VRVIR RVGKGIAYV F+ EAA L+ ++
Sbjct: 366 ADVEEGLWRCFAKCG------TVESVRVIRDNTTRVGKGIAYVQFEDENAVEAALLLNEK 419
Query: 402 RNLKLRDRELRLSHAQ 417
+ + R+LR+S A+
Sbjct: 420 KFPPMLPRKLRVSRAK 435
>gi|367018418|ref|XP_003658494.1| hypothetical protein MYCTH_2294324 [Myceliophthora thermophila ATCC
42464]
gi|347005761|gb|AEO53249.1| hypothetical protein MYCTH_2294324 [Myceliophthora thermophila ATCC
42464]
Length = 608
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 54/236 (22%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKFGE--------IDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KKTL++ + ++S+R RS P IP++ A
Sbjct: 231 RTVFLSNVSVEAIKSRKAKKTLLRHLSSVLDKNADPPQKVESIRFRSTPFQSAGIPKRAA 290
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K++ E S +AY+V+ + ++ A+A N ++ H+R+D P A
Sbjct: 291 YIKKEVLEATTKSTNAYVVYSTTAASRLAVAQLNGTIVLDRHLRVDSVAHP--------A 342
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D ++ VFVGNL F V DE +Y L+ +
Sbjct: 343 PI-DHRRCVFVGNLGF-VDDETVYNTKIDEEGKEVVVKRKRTKTPMDVEEGLWRVFGEEA 400
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
VE+VRV+R P RVGKG AYV F E+A L+ ++ + RELR+S +
Sbjct: 401 GKVESVRVVRDPVTRVGKGFAYVQFYDGNAVESAILLNGKKFPPMLPRELRVSRCK 456
>gi|320040233|gb|EFW22166.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 465
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 122/303 (40%), Gaps = 90/303 (29%)
Query: 162 KKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNE----TEDMLVHRKEEG 217
+K++KRKR + E D E IAKEEE + +KR A NE T++ E G
Sbjct: 131 EKSRKRKRHEAEDDLEESYMRKIAKEEEKDR----KKRAAAKNEKRQRTDESPAADSEAG 186
Query: 218 FD--DEGKLL--------------------------------RTIFVGNLPL-----KVK 238
DE K RT+F+GN+ K
Sbjct: 187 SSGPDEQKDDEESESDQEDEGPPPVHESLANTAEAAALEKSNRTVFLGNVSSEAIKSKSS 246
Query: 239 KKTLIKEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHA 287
KK L+ F +I+S+R RS +P++ A +K + + S +A
Sbjct: 247 KKALLAHLSSFFPSLPESSTPHKIESIRFRSTAFATAAVPKRAAFAKKDLMDSTTRSTNA 306
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
Y+V+ + + AL+ N + H+R+D P AP+ D K+ VFVGNL F
Sbjct: 307 YVVYTTAAAARKALSLNGTTVLDRHLRVDSIAHP--------API-DHKRCVFVGNLGF- 356
Query: 348 VKDEEIYQ---------------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
DEE L+ N+ VE+VRV+R P RVGKG AY
Sbjct: 357 -VDEEAAASTDDQEKKRKKSATPSDVEEGLWRTFNENAGRVESVRVVRDPSTRVGKGFAY 415
Query: 387 VLF 389
+ F
Sbjct: 416 IQF 418
>gi|195344626|ref|XP_002038882.1| GM17146 [Drosophila sechellia]
gi|194134012|gb|EDW55528.1| GM17146 [Drosophila sechellia]
Length = 436
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 157 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 208
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVGNL 344
AY+V ++ + + ALA N NH+R+ A K +G+D D K+T+FVG+L
Sbjct: 209 AYVVLQNPEIAQQALALNGTEFKENHLRVTPASMAEKFGQGKDQQPSDKDAKRTIFVGSL 268
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
+ +E++ ++F CG ++ +R ++ + KG+AYV F+ +A L ++
Sbjct: 269 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQKPDAVGLALELN 321
Query: 403 NLKLRDRELRLSHAQ 417
L DR + + Q
Sbjct: 322 QTLLDDRPINVERYQ 336
>gi|449297210|gb|EMC93228.1| hypothetical protein BAUCODRAFT_46871, partial [Baudoinia
compniacensis UAMH 10762]
Length = 479
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 119/258 (46%), Gaps = 68/258 (26%)
Query: 212 HRKEEGFDDE-GKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGE-------------- 251
H +E D E K RTIF+GN+ K +KTLIK F +
Sbjct: 127 HETQESADVELQKANRTIFLGNVSTTAISSKSARKTLIKHLTSFFDSLPPPKDTNPPAPK 186
Query: 252 IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVIG 309
++S+R RS P T IPRK A +K + + S +AY V+ S EAA N ++I
Sbjct: 187 LESLRFRSTPYA-TSIPRKAAFARKDLMDATTKSTNAYAVYSSPHLCREAAKRLNGSIIL 245
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF-----DVKD-------------- 350
H+R+D P AP D ++ VFVGNL F +++D
Sbjct: 246 DRHLRVDVVAHP--------APT-DHRRCVFVGNLGFVDDESNIQDANEADGYEKRKRGK 296
Query: 351 ------EEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVI 399
E +++ F CG +VE+VRVIR RVGKG+AYV F+ EAA
Sbjct: 297 EPADVEEGLWRTFSKCG------TVESVRVIRDSTTRVGKGVAYVQFEDENGVEAALGYD 350
Query: 400 KRRNLKLRDRELRLSHAQ 417
+++ + R+LR+S A+
Sbjct: 351 EKKFPPMLPRKLRVSRAR 368
>gi|395849832|ref|XP_003797517.1| PREDICTED: RNA-binding protein 34, partial [Otolemur garnettii]
Length = 406
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 43/206 (20%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
++++EE +E RT+FVGNLP+ KK +P T + +K
Sbjct: 174 INQEEERLKNE----RTVFVGNLPITCNKK-------------------IPAEGT-LSKK 209
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGED 329
A ++++I+ + +++AY+VFK + + AL N I G IR+D A +
Sbjct: 210 LAAIKRKIHPDQKNINAYVVFKDKSAAVKALKRNGTQIADGFRIRVDLASETSSR----- 264
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
K++VFVGNLP+ V++ + + F CG ++ AVR++R +GKG YV
Sbjct: 265 -----DKRSVFVGNLPYKVEESVVEKHFLDCG------NIVAVRIVRDQATGLGKGFGYV 313
Query: 388 LFKTREAANLVIKRRNLKLRDRELRL 413
LF+ +A +L +K N +L R+LR+
Sbjct: 314 LFENTDAVHLALKLNNSELMGRKLRV 339
>gi|237839677|ref|XP_002369136.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211966800|gb|EEB01996.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 802
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPIIDT-KIPRKGAILQKQIN 279
K RT+FVGNLPL K + + G +++S+R+RS+P+ R G +++ Q
Sbjct: 553 KDCRTVFVGNLPLSGWKPPALYRHLGIGRKDVESIRLRSIPVHPKFNKCRLGGLVKGQFT 612
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA----PLYDI 335
+ D +AYIV K + + L + G +R+D A GE +D
Sbjct: 613 DLKDFQNAYIVLKDRRLFRSILQHDGTSFQGRRLRVDEA--------GERGRNVFSRFDR 664
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
KKTVFVGNLP +E++ + + +V+AVR+IR KG +V F+ R +A
Sbjct: 665 KKTVFVGNLPSRCSEEDLRRAL----ESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSA 720
Query: 396 NLVIKRRN--LKLRDRELRLSHAQQNCTPSKRKDV 428
+ N + L+ + LR++ A T SK +D
Sbjct: 721 ARAVLASNGVVSLQGKTLRVTRALDEAT-SKMEDA 754
>gi|195054168|ref|XP_001993998.1| GH17992 [Drosophila grimshawi]
gi|193895868|gb|EDV94734.1| GH17992 [Drosophila grimshawi]
Length = 444
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIF+GNLP+ K+ L++ FG ++S+R+R+ K KQ E A S++
Sbjct: 166 TIFIGNLPINTKRVQLVRLLQPFGTVNSIRLRTA-------GGKHLFKHKQRKE-AGSLN 217
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP------RKKLKGEDAPLYDIKKTVF 340
AY+V S Q E ALA N NH+R+ A D K+T+F
Sbjct: 218 AYVVLNSAQVAEKALALNGTEFKENHLRVTPAAKAGTTAGNDLSSASSAPSDADNKRTIF 277
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VGNL + +E++ ++F CG ++ +R + H R KG+AYV F+ +A L
Sbjct: 278 VGNLKYSANEEKLREIFSSCG------EIDYIRCL-HDGERGCKGVAYVCFQQPDAVGLA 330
Query: 399 IKRRNLKLRDRELRL 413
++ L +R + +
Sbjct: 331 LELNETMLDERPIHV 345
>gi|452846765|gb|EME48697.1| hypothetical protein DOTSEDRAFT_141994 [Dothistroma septosporum
NZE10]
Length = 562
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 130/289 (44%), Gaps = 71/289 (24%)
Query: 184 IAKEEEGKKVGVGEKRKKADNETEDMLV----HRKEEGFDDE-GKLLRTIFVGNLPL--- 235
I+ E E G + D + E+ L H ++ DD+ K RTIF+ N+
Sbjct: 163 ISDEGEEAVAGADDSASDVDEDNEEKLSPLPKHETQQQADDDLSKANRTIFLSNVSTDAI 222
Query: 236 --KVKKKTLIKEFIKF---------GEI----DSVRIRSVPIIDTKIPRKGAILQKQI-N 279
K ++TL+K F GEI +S+R RS P + IP+K A +K++ +
Sbjct: 223 SSKASRRTLLKHLGSFFDKLTVPKPGEIKHKVESIRFRSTPYA-SAIPKKAAFAKKELMD 281
Query: 280 ENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
S +AY V+ S + EA+ N + HIR+D P K D ++
Sbjct: 282 ATTKSTNAYAVYSSPILAREASKRLNGTTVLDRHIRVDEVAHPAK---------VDNRRC 332
Query: 339 VFVGNLPF-----DVKD--------------------EEIYQLF--CGLNDLESSVEAVR 371
VFVGNL F +++D E +++ F CG VE+VR
Sbjct: 333 VFVGNLGFVDDESNIQDANEEDGREKRKRGKEPADIEEGLWRTFGKCG------KVESVR 386
Query: 372 VIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
VIR RVGKGIAYV F+ EAA L +++ + R+LR+S A+
Sbjct: 387 VIRDSTTRVGKGIAYVQFEDENAVEAALLYNEKKFPPMLPRKLRVSRAK 435
>gi|195579698|ref|XP_002079698.1| GD21886 [Drosophila simulans]
gi|194191707|gb|EDX05283.1| GD21886 [Drosophila simulans]
Length = 436
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 102/197 (51%), Gaps = 23/197 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L+K F +G + S+R+R+ G + + + + A S
Sbjct: 157 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA----------GGKQLFKHKQRKVAGS 206
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVG 342
++AY+V ++ + + AL+ N NH+R+ A K +G+D D K+T+FVG
Sbjct: 207 LNAYVVLQNPEIAQQALSLNGTEFKENHLRVTPASMAEKFSQGKDQQPSDKDAKRTIFVG 266
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+L + +E++ ++F CG ++ +R ++ + KG+AYV F+ +A L ++
Sbjct: 267 SLKYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQKPDAVGLALE 319
Query: 401 RRNLKLRDRELRLSHAQ 417
L DR + + Q
Sbjct: 320 LNQTLLDDRPINVERYQ 336
>gi|145340686|ref|XP_001415451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575674|gb|ABO93743.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 225
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG---LNDLESS 366
G HIR+D A P ++ E +YD ++VF+G+LPF+V DE++ +LF DL S
Sbjct: 6 GRHIRVDLASKP-SIIRSE--VVYDHTRSVFLGHLPFNVDDEDVIRLFNKNKEYPDLRKS 62
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTP 422
VEAVRV+R +GKGI +VLFKT A + KL DRE+R+S A ++ P
Sbjct: 63 VEAVRVVRDRKTTMGKGIGFVLFKTPAQARTALLLDGSKLGDREIRVSKAARSKAP 118
>gi|221484519|gb|EEE22813.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
GT1]
Length = 802
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPIIDT-KIPRKGAILQKQIN 279
K RT+FVGNLPL K + + G +++S+R+RS+P+ R G +++ Q
Sbjct: 553 KDCRTVFVGNLPLSGWKPPALYRHLGIGRKDVESIRLRSIPVHPKFNKCRLGGLVKGQFT 612
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA----PLYDI 335
+ D +AYIV K + + L + G +R+D A GE +D
Sbjct: 613 DLKDFQNAYIVLKDRRLFRSILQHDGTSFQGRRLRVDEA--------GERGRNVFSRFDR 664
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
KKTVFVGNLP +E++ + + +V+AVR+IR KG +V F+ R +A
Sbjct: 665 KKTVFVGNLPSRCSEEDLRRAL----ESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSA 720
Query: 396 NLVIKRRN--LKLRDRELRLSHAQQNCTPSKRKDV 428
+ N + L+ + LR++ A T SK +D
Sbjct: 721 ARAVLASNGVVSLQGKTLRVTRALDEAT-SKMEDA 754
>gi|221504716|gb|EEE30381.1| RNA binding motif-containing protein, putative [Toxoplasma gondii
VEG]
Length = 802
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFG--EIDSVRIRSVPIIDT-KIPRKGAILQKQIN 279
K RT+FVGNLPL K + + G +++S+R+RS+P+ R G +++ Q
Sbjct: 553 KDCRTVFVGNLPLSGWKPPALYRHLGIGRKDVESIRLRSIPVHPKFNKCRLGGLVKGQFT 612
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA----PLYDI 335
+ D +AYIV K + + L + G +R+D A GE +D
Sbjct: 613 DLKDFQNAYIVLKDRRLFRSILQHDGTSFQGRRLRVDEA--------GERGRNVFSRFDR 664
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
KKTVFVGNLP +E++ + + +V+AVR+IR KG +V F+ R +A
Sbjct: 665 KKTVFVGNLPSRCSEEDLRRAL----ESNGTVKAVRIIRDKVTTESKGFGFVCFEDRVSA 720
Query: 396 NLVIKRRN--LKLRDRELRLSHAQQNCTPSKRKDV 428
+ N + L+ + LR++ A T SK +D
Sbjct: 721 ARAVLASNGVVSLQGKTLRVTRALDEAT-SKMEDA 754
>gi|146331996|gb|ABQ22504.1| RNA-binding protein 34-like protein [Callithrix jacchus]
Length = 220
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 25/181 (13%)
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIG- 309
+I+SVR RS+ + + +K A ++++I+ + +++AY+VFK + AL N A I
Sbjct: 1 QIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKDGSAATQALKRNGAQIAD 60
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSV 367
G IR+D A + K++VFVGNLP+ V++ + + F CG S+
Sbjct: 61 GFRIRVDLASATSSR----------DKRSVFVGNLPYKVEESAVEKHFLDCG------SI 104
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA------QQNCT 421
AVR++R +GKG YVLF+ ++ +L +K N +L R+LR+ + +QN
Sbjct: 105 MAVRIVRDQVTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVMRSVNKEKLKQNSN 164
Query: 422 P 422
P
Sbjct: 165 P 165
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 18/106 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R++FVGNLP KV++ + K F+ G I +VR I+ ++ G + EN DSV
Sbjct: 78 RSVFVGNLPYKVEESAVEKHFLDCGSIMAVR-----IVRDQVTGIGKGFGYVLFENTDSV 132
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
H AL N + + G +R+ R+ ++KLK P
Sbjct: 133 H------------LALKLNNSELMGRKLRVMRSV-NKEKLKQNSNP 165
>gi|154344829|ref|XP_001568356.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065693|emb|CAM43465.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 458
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTK---IPRKGAILQKQINE 280
RTIFVGNLP + K+ + K F G I +VRIR + +D K + R +L+ +I +
Sbjct: 164 RTIFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQNMGRAVRVLRGEIKK 223
Query: 281 NAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+A S AY++F S +S +AL N V HI + ++ Y + ++
Sbjct: 224 DAKYSSTAYVLFDSAESIASALEKNGLVFHNRHIVV--------TTMDVESCAYPPETSI 275
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
F+GN+ +D +E+++ F G+ D V+ VR++R KG YV F + +
Sbjct: 276 FLGNVAYDTTEEDVWNFFQEHGIRD----VKRVRLVRDRETGDCKGFGYVEFMHASSVHP 331
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
I+ R KL RELR+ H +K K+V A S
Sbjct: 332 AIETRGDKLNGRELRIVHV------NKSKEVKAATTS 362
>gi|320168946|gb|EFW45845.1| hypothetical protein CAOG_03829 [Capsaspora owczarzaki ATCC 30864]
Length = 617
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 14/211 (6%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D + RT+F GN+ + V K L + FG + SVR RSV I K+ RK A + ++
Sbjct: 313 NDPQRAERTLFFGNVDVNVTDKVLRRLCAPFGVVVSVRFRSVAFISPKLDRKVAFARGKL 372
Query: 279 NENADSVHAYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK 337
+ ++AY+V + + + AALA N V+ G H+R+D A K +D +K
Sbjct: 373 HPERHVMNAYVVMREAAVARRAALALNGTVLEGKHLRVDIASNSNKP--------HDHRK 424
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+VFVGNLP + ++E +++ F D+ + VR++R VGKG +V FK + +L
Sbjct: 425 SVFVGNLPMNAEEEALWEAFGKCGDIAT----VRLVRDAETNVGKGFGFVSFKDAASIDL 480
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKD 427
++ + ++ R+LR++ A K+K+
Sbjct: 481 AVRLHEIAEIGGRKLRVTRAGSEAVMKKKKE 511
>gi|358379161|gb|EHK16842.1| hypothetical protein TRIVIDRAFT_115017, partial [Trichoderma virens
Gv29-8]
Length = 538
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 55/317 (17%)
Query: 146 KQNSNFSVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKV--GVGEKRKKA- 202
++NSN + K + + K+ +K+ DD+E Y+ K E GK++ G G+ + A
Sbjct: 105 EENSNDVEQAKTQRDRKRKRKQDNDDLEGRYLAKLADDDEPEPSGKRLKGGEGDAQDSAK 164
Query: 203 DNETEDMLVHR---KEEGFDDEGKLLRTIFVGNLPLK-VKKKTLIKEFIKF--------- 249
+ + ++ VH +E + K RT+F+GN+ + + KT KE +K
Sbjct: 165 EGDDDEAPVHESLTQESKQSEVEKAARTVFLGNVATEAISSKTAKKELMKHLSSVLDKDA 224
Query: 250 ---GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FN 304
+I+S+R RSV +P++ A + K + + S +AY VF + + + N
Sbjct: 225 SPPQKIESLRFRSVAFSTGSMPKRAAYITKALMDATTKSTNAYAVFSTPAAARKVVTELN 284
Query: 305 MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE------------- 351
I G HIR+D P +P+ + + VFVGNL F V DE
Sbjct: 285 GTEILGRHIRVDSVAHP--------SPM-NHRNCVFVGNLGF-VDDETVLNRKADGETVE 334
Query: 352 --------EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIK 400
+I + + VE VRV+R RVGKG AYV F EAA L+
Sbjct: 335 KKRNKVPSDIEEGLWRTFGTQGKVENVRVVRDSKTRVGKGFAYVQFYDANDVEAALLLNG 394
Query: 401 RRNLKLRDRELRLSHAQ 417
++ + RELR++ A+
Sbjct: 395 KKFPPMLPRELRVTRAK 411
>gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster]
Length = 435
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 23/197 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L+K F +G + S+R+R+ G + + + + A S
Sbjct: 156 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA----------GGKQLFKHKQRKVAGS 205
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK--KLKGEDAPLYDIKKTVFVG 342
++AY+V + + + ALA N + NH+R+ A K + K + D K+T+FVG
Sbjct: 206 LNAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDQQPSDKDAKRTIFVG 265
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+L + +E++ ++F CG ++ +R ++ + KG+AYV F+ +A L ++
Sbjct: 266 SLKYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQKPDAVGLALE 318
Query: 401 RRNLKLRDRELRLSHAQ 417
L DR + + Q
Sbjct: 319 LNQTLLDDRPINVERYQ 335
>gi|302411744|ref|XP_003003705.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261357610|gb|EEY20038.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 550
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 126/284 (44%), Gaps = 69/284 (24%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIF 229
DDVEK+ + ++AK+ K D T+D V K RT+F
Sbjct: 159 DDVEKEVLPVHESLVAKD-------------KNDANTKDTDVE----------KASRTVF 195
Query: 230 VGNLP-----LKVKKKTLIKEF---IKFGE-IDSVRIRSVPIIDTKIPRKGAILQKQINE 280
+ N+ K KKTL+ ++ GE I+S+R RS+ +P++ A + + E
Sbjct: 196 LANVAAEASTTKAAKKTLMTHLSTVLEKGEKIESIRFRSLAFSAGSMPKRAAYITHSLME 255
Query: 281 -NADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
S +AY+V+ + + +A N +V+ HIR+D P AP D ++
Sbjct: 256 ATTKSANAYVVYSTPAAARKACTTLNGSVVLDRHIRVDSVAHP--------APT-DHRRC 306
Query: 339 VFVGNLPFDVKDEEIYQ----------------------LFCGLNDLESSVEAVRVIRHP 376
VFVGNL F V DE + L+ + VE+VRVIR P
Sbjct: 307 VFVGNLGF-VDDETVLNTDASGETKERKRNKVPSDIEEGLWRVFGKEDGKVESVRVIRDP 365
Query: 377 HMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
RVGKG AYV F EAA L+ +++ + R LR++ A+
Sbjct: 366 KTRVGKGFAYVQFHDANDVEAALLLNEKKFPPMLPRTLRVTRAK 409
>gi|440463708|gb|ELQ33262.1| nucleolar protein 12 [Magnaporthe oryzae Y34]
gi|440483702|gb|ELQ64051.1| nucleolar protein 12 [Magnaporthe oryzae P131]
Length = 551
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 136/316 (43%), Gaps = 71/316 (22%)
Query: 159 SENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNET------------ 206
SEN + +KRK+ D D K + +A EE+ +K ++ KK NE+
Sbjct: 112 SENNRKRKRKQADAHDDLETKYFQKVAAEEDEEK-NRSKRSKKERNESTKDSADAPGGLI 170
Query: 207 -EDMLVHRKEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGE--------I 252
E +L ++ D G RT+F+ N+ K KK L+ + I
Sbjct: 171 HESLLPDNEKTELDKAG---RTVFLSNVSTEAITSKSAKKQLMAHLASVLDKEAKPPQTI 227
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGG 310
+S+R RSVP+ +P++ A++ + + + S +AY+V+ AA+ N ++
Sbjct: 228 ESLRFRSVPVATAAMPKRAAVITEAVMDATTKSANAYVVYSDAAGARAAVTKLNGTMVLD 287
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------- 355
H+R D P AP+ D ++ VFVGNL F V DE +
Sbjct: 288 RHLRTDSVAHP--------APV-DHRRCVFVGNLGF-VDDETVVNVTVDEDGKQKEEKRK 337
Query: 356 -----------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKR 401
L+ VE VRV+R RVGKGIAYV F + EAA L+ +
Sbjct: 338 RTKVPMDVEEGLWRTFGKSAGKVENVRVVRDGVTRVGKGIAYVQFYDANSVEAALLLDGK 397
Query: 402 RNLKLRDRELRLSHAQ 417
+ L R LR++ +
Sbjct: 398 KFPPLLPRALRVTRCK 413
>gi|389631593|ref|XP_003713449.1| nucleolar protein 12 [Magnaporthe oryzae 70-15]
gi|351645782|gb|EHA53642.1| nucleolar protein 12 [Magnaporthe oryzae 70-15]
Length = 551
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 136/316 (43%), Gaps = 71/316 (22%)
Query: 159 SENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNET------------ 206
SEN + +KRK+ D D K + +A EE+ +K ++ KK NE+
Sbjct: 112 SENNRKRKRKQADAHDDLETKYFQKVAAEEDEEK-NRSKRSKKERNESTKDSADAPGGLI 170
Query: 207 -EDMLVHRKEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGE--------I 252
E +L ++ D G RT+F+ N+ K KK L+ + I
Sbjct: 171 HESLLPDNEKTELDKAG---RTVFLSNVSTEAITSKSAKKQLMAHLASVLDKEAKPPQTI 227
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGG 310
+S+R RSVP+ +P++ A++ + + + S +AY+V+ AA+ N ++
Sbjct: 228 ESLRFRSVPVATAAMPKRAAVITEAVMDATTKSANAYVVYSDAAGARAAVTKLNGTMVLD 287
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------- 355
H+R D P AP+ D ++ VFVGNL F V DE +
Sbjct: 288 RHLRTDSVAHP--------APV-DHRRCVFVGNLGF-VDDETVVNVTVDEDGKQKEEKRK 337
Query: 356 -----------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKR 401
L+ VE VRV+R RVGKGIAYV F + EAA L+ +
Sbjct: 338 RTKVPMDVEEGLWRTFGKSAGKVENVRVVRDGVTRVGKGIAYVQFYDANSVEAALLLDGK 397
Query: 402 RNLKLRDRELRLSHAQ 417
+ L R LR++ +
Sbjct: 398 KFPPLLPRALRVTRCK 413
>gi|195069101|ref|XP_001996948.1| GH22238 [Drosophila grimshawi]
gi|193891982|gb|EDV90848.1| GH22238 [Drosophila grimshawi]
Length = 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIF+GNLP+ K+ L++ FG ++S+R+R+ K KQ E A S++
Sbjct: 166 TIFIGNLPINTKRVQLVRLLQPFGTVNSIRLRTA-------GGKHLFKHKQRKE-AGSLN 217
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP------RKKLKGEDAPLYDIKKTVF 340
AY+V S Q E ALA N NH+R+ A D K+T+F
Sbjct: 218 AYVVLNSAQVAEKALALNGTEFKENHLRVTPAAKAGTTAGNDLSSASSAPSDADNKRTIF 277
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VGNL + +E++ ++F CG ++ +R + H R KG+AYV F+ +A L
Sbjct: 278 VGNLKYSANEEKLREIFSSCG------EIDYIRCL-HDGERGCKGVAYVCFQQPDAVGLA 330
Query: 399 IKRRNLKLRDRELRL 413
++ L +R + +
Sbjct: 331 LELNETMLDERPIHV 345
>gi|346978411|gb|EGY21863.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 550
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 46/228 (20%)
Query: 226 RTIFVGNLP-----LKVKKKTLIKEF---IKFGE-IDSVRIRSVPIIDTKIPRKGAILQK 276
RT+F+ N+ KV KKTL+ ++ GE I+S+R RS+ +P++ A +
Sbjct: 192 RTVFLANVAAEASTTKVAKKTLMTHLSTVLEKGEKIESIRFRSLAFSAGSMPKRAAYITH 251
Query: 277 QINE-NADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
+ E S +AY+V+ + + +A N +V+ HIR+D P AP D
Sbjct: 252 SLMEATTKSANAYVVYSTPAAARKACTTLNGSVVLDRHIRVDSVAHP--------APT-D 302
Query: 335 IKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLNDLESSVEAVRV 372
++ VFVGNL F V DE + L+ + VE+VRV
Sbjct: 303 HRRCVFVGNLGF-VDDETVLNTDASGETKERKRNKVPSDIEEGLWRVFGKEDGKVESVRV 361
Query: 373 IRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
IR P RVGKG AYV F EAA L+ +++ + R LR++ A+
Sbjct: 362 IRDPKTRVGKGFAYVQFHDANDVEAALLLNEKKFPPMLPRTLRVTRAK 409
>gi|24584762|ref|NP_609822.1| CG12288 [Drosophila melanogaster]
gi|7298360|gb|AAF53587.1| CG12288 [Drosophila melanogaster]
Length = 435
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 23/197 (11%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA--ILQKQINENADS 284
T+FVGNLP+ K+ L+K F +G + S+R+R+ G + + + + A S
Sbjct: 156 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA----------GGKQLFKHKQRKVAGS 205
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK--KLKGEDAPLYDIKKTVFVG 342
++AY+V + + + ALA N + NH+R+ A K + K + D K+T+FVG
Sbjct: 206 LNAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVG 265
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+L + +E++ ++F CG ++ +R ++ + KG+AYV F+ +A L ++
Sbjct: 266 SLKYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQKPDAVGLALE 318
Query: 401 RRNLKLRDRELRLSHAQ 417
L DR + + Q
Sbjct: 319 LNQTLLDDRPINVERYQ 335
>gi|116182340|ref|XP_001221019.1| hypothetical protein CHGG_01798 [Chaetomium globosum CBS 148.51]
gi|88186095|gb|EAQ93563.1| hypothetical protein CHGG_01798 [Chaetomium globosum CBS 148.51]
Length = 641
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 145/335 (43%), Gaps = 88/335 (26%)
Query: 152 SVEGKKRSENKKTKKRKRDD---VEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETED 208
+ G + E +K K+++RDD +E +Y+E+ +A EEE KR KAD+ +D
Sbjct: 181 ATRGPSQDEARKRKRKQRDDDEDLEANYLER----LANEEEPSG-----KRHKADSTEKD 231
Query: 209 ML--VHRKEEGFDDE--------------------GKLLRTIFVGNLPLKV-----KKKT 241
++ + E+ DDE K RT+F+ N+ + KKT
Sbjct: 232 VVPTASKVEKEDDDELGGDVPVHESVAARPAVSELEKANRTVFLSNVAAEAITSRKAKKT 291
Query: 242 LIKEFIKFGE--------IDSVRIRSVPIIDTKIPRKGAILQKQINE-NADSVHAYIVFK 292
L+K + ++S+R RS IP++ A ++K++ E S +AY V+
Sbjct: 292 LLKHLSSILDKKADPPQKVESIRFRSTAFESAGIPKRAAFIKKEVLEATTKSTNAYAVYS 351
Query: 293 SEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE 351
+ + A+A N V+ H+R+D P D ++ VFVGNL F V DE
Sbjct: 352 TTAAARLAVAQLNGTVVLDRHLRVDSVAHPAA---------VDHRRCVFVGNLGF-VDDE 401
Query: 352 EIYQ--------------------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIA 385
+Y L+ VE+VRV+R RVGKG A
Sbjct: 402 SVYNVKVNEEGKEVGERRKRTKTPMDVEEGLWRVFGKEGGKVESVRVVRDAATRVGKGFA 461
Query: 386 YVLF---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
YV F + E+A L+ ++ + RELR++ +
Sbjct: 462 YVQFYDGNSVESAILINGKKFPPMLPRELRVTRCK 496
>gi|407036329|gb|EKE38119.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 413
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 176 RTVFIANINIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 235
Query: 285 VHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ SE + +AA + G H+R D KK +I++T+FVGN
Sbjct: 236 QNCYAVYATSEDAEKAAKEIDGKEFLGYHLRADWEVNKGKKR--------NIRQTIFVGN 287
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPF +++E++ +LF + +E V+++R +G+GI +V F +E +
Sbjct: 288 LPFKMEEEQLRKLFSKAGE----IERVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNMVG 343
Query: 404 LKLRDRELRLSHAQQNCTPSKRK 426
K++ R++R+ +N K+K
Sbjct: 344 EKIKGRQIRVEPCYKNYDKIKQK 366
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L K F K GEI+ V+I
Sbjct: 279 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKI 312
>gi|195112762|ref|XP_002000941.1| GI10515 [Drosophila mojavensis]
gi|193917535|gb|EDW16402.1| GI10515 [Drosophila mojavensis]
Length = 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 26/195 (13%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV---PIIDTKIPRKGAILQKQINENAD 283
TIFVGNLP+ K+ +++ FG + S+R+R+ + K RK A+
Sbjct: 158 TIFVGNLPINTKRVQIVRLLKPFGAVHSIRLRTAGGKKLFKLK-QRKAAV---------- 206
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA--CPPRKKL-KGEDAPLYDIKKTVF 340
S++AY+V + + + ALA N NH+R+ A C K + G+ + D+K+TVF
Sbjct: 207 SLNAYVVLDNPEIAQKALALNGTQFKENHLRVTPAAKCGEVKDVGNGQASSEADVKRTVF 266
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+GNL + +E++ ++F CG ++ +R ++ + KG+AYV F+ +A L
Sbjct: 267 IGNLKYSASEEKLREIFSSCG------EIDYIRCLQDGE-KGCKGVAYVCFQKPDAVGLA 319
Query: 399 IKRRNLKLRDRELRL 413
++ L DR + +
Sbjct: 320 LELNETLLDDRPIHV 334
>gi|336261210|ref|XP_003345396.1| hypothetical protein SMAC_04627 [Sordaria macrospora k-hell]
gi|380090650|emb|CCC11645.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 591
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 54/236 (22%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ + + KKTL+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTDRAAKKTLMKHMASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+VF + + A + N ++ H+R+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVFSTPAAARLACSKLNGTIVLDRHVRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLNDLE 364
P+ D K+ VFVGNL F V DE + Q L+
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDESVLQTKVNEEGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
VE+VRV+R P RVGKG AYV F E+A L+ ++ + RELR+S +
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQFYDENAVESAILLNGKKFPPMLPRELRVSRCK 425
>gi|195483935|ref|XP_002090493.1| GE13151 [Drosophila yakuba]
gi|194176594|gb|EDW90205.1| GE13151 [Drosophila yakuba]
Length = 433
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 19/195 (9%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNLP+ K+ L+K F +G + S+R+R+ + + + + A S++
Sbjct: 154 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTA--------GGKQLFKHKQRKVAGSLN 205
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY--DIKKTVFVGNL 344
AY+V ++ + + AL+ N NH+R+ A +G D D K+T+FVG+L
Sbjct: 206 AYVVLQNPEIAQQALSLNGTEFKENHLRVTPAAKAEGFGQGADQQPSDKDAKRTIFVGSL 265
Query: 345 PFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
+ +E++ ++F CG ++ +R ++ + KG+AYV F+ +A L ++
Sbjct: 266 KYSATEEQLREIFSSCG------EIDYIRCLQDGD-KGCKGVAYVCFQKPDAVGLALELN 318
Query: 403 NLKLRDRELRLSHAQ 417
L DR + + Q
Sbjct: 319 QTLLDDRPINVERYQ 333
>gi|302923245|ref|XP_003053634.1| hypothetical protein NECHADRAFT_74992 [Nectria haematococca mpVI
77-13-4]
gi|256734575|gb|EEU47921.1| hypothetical protein NECHADRAFT_74992 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 141/318 (44%), Gaps = 62/318 (19%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVG------VGEKRKKADNE 205
+ EGK++ E K+ +K DD+E +Y+ K E GK+ GEK + D+E
Sbjct: 129 ATEGKEKKERKRKRKNDNDDLEGNYLSKVAAEEEAERAGKRQKNDGSKEDGEKVEGEDDE 188
Query: 206 TE----DMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIKFGE-- 251
D+ VH KE+ D K RT+F+ N+ K KKTL+ E
Sbjct: 189 ASGDESDIPVHETLAKEDKSSDLEKAARTVFLANVSTEAISSKTAKKTLMAHLSSILEKD 248
Query: 252 ------IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-F 303
I+S+R RSV +P++ A + K + + S +AY+V+ + + A+A
Sbjct: 249 ASPPQTIESIRFRSVAFAGGSLPKRAAYITKSLMDATTKSANAYVVYSTIAAAREAVAKL 308
Query: 304 NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN-- 361
N + H+R+D P D ++ VFVGNL F V DE I +
Sbjct: 309 NGTQVLDRHLRVDSVAHPSPT---------DHRRCVFVGNLGF-VDDETILATNADGDTT 358
Query: 362 ---------DLESS----------VEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVI 399
D+E VE VRV+R RVGKGIAYV F EAA L+
Sbjct: 359 QKKRNKTPSDIEEGLWRTFSTQGKVENVRVVRDSKTRVGKGIAYVQFYDANDVEAALLLD 418
Query: 400 KRRNLKLRDRELRLSHAQ 417
++ + R+LR++ A+
Sbjct: 419 DKKFPPMLPRKLRVTRAK 436
>gi|401429538|ref|XP_003879251.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495501|emb|CBZ30806.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 455
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTK---IPRKGAILQKQINE 280
RT+FVGNLP + K+ + K F G I +VRIR + +D K + R +L+ +I +
Sbjct: 161 RTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEKHQNMGRAVRVLRGEIKK 220
Query: 281 NAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL------DRACPPRKKLKGEDAPLY 333
+A S AY++F S +S +AL N V H+ + RA PP
Sbjct: 221 DAKYSATAYVLFDSAKSIASALEKNGLVFHSRHLVVTTMDVESRAYPP------------ 268
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ ++F+GN+ ++ +E+++ F G+ D V+ VR++R KG YV F
Sbjct: 269 --ETSIFLGNVAYNTTEEDVWSFFQEHGIAD----VKRVRLVRDRETGDCKGFGYVEFMH 322
Query: 392 REAANLVIKRRNLKLRDRELRLSHAQQN 419
+ I+ R KL RELR+ H ++
Sbjct: 323 ASSVQPAIETRGDKLNGRELRIVHVNKS 350
>gi|336464220|gb|EGO52460.1| nucleolar protein 12 [Neurospora tetrasperma FGSC 2508]
Length = 594
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 54/236 (22%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KKTL+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTSRSAKKTLMKHLASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+V+ + + A + N ++ HIR+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVYSTPAAARLACSKLNGTIVLDRHIRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------------DLESS--------- 366
P+ D K+ VFVGNL F V DE + Q+ + D+E
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDETVLQVKVDEDGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 367 --VEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
VE+VRV+R P RVGKG AYV F E+A L+ ++ + RELR+S +
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQFCDENAVESAILLNGKKFPPMLPRELRVSRCK 425
>gi|449704866|gb|EMD45026.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 414
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 177 RTVFIANVNIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 236
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ + E + +AA + G H+R D KK +I++T+FVGN
Sbjct: 237 QNCYAVYTTPEDAEKAAKEIDGKEFLGYHLRADWEVNKGKKR--------NIRQTIFVGN 288
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPF +++E++ +LF + +E V+++R +G+GI +V F +E +
Sbjct: 289 LPFKMEEEQLRKLFSKAGE----IERVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNMVG 344
Query: 404 LKLRDRELRLSHAQQNCTPSKRK 426
K++ R++R+ +N K+K
Sbjct: 345 EKVKGRQIRVEPCYKNYDKIKQK 367
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L K F K GEI+ V+I
Sbjct: 280 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKI 313
>gi|67477043|ref|XP_654040.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471058|gb|EAL48654.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 414
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA-DS 284
RT+F+ N+ +KVK + K +FG+++S R R I + +K L+K+ + +
Sbjct: 177 RTVFIANVNIKVKPAQMKKFLKQFGKLESYRFRGGAFIQDEKSKKVHFLKKEYDTKVRKT 236
Query: 285 VHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ Y V+ + E + +AA + G H+R D KK +I++T+FVGN
Sbjct: 237 QNCYAVYTTPEDAEKAAKEIDGKEFLGYHLRADWEVNKGKKR--------NIRQTIFVGN 288
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LPF +++E++ +LF + +E V+++R +G+GI +V F +E +
Sbjct: 289 LPFKMEEEQLRKLFSKAGE----IERVKIVRESKSGMGRGIGFVTFTNKEDVQKGLNMVG 344
Query: 404 LKLRDRELRLSHAQQNCTPSKRK 426
K++ R++R+ +N K+K
Sbjct: 345 EKVKGRQIRVEPCYKNYDKIKQK 367
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+ +TIFVGNLP K++++ L K F K GEI+ V+I
Sbjct: 280 IRQTIFVGNLPFKMEEEQLRKLFSKAGEIERVKI 313
>gi|119484168|ref|XP_001261987.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119410143|gb|EAW20090.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 537
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 97/343 (28%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEEEG---KKVGVGEKRKKADNETED--------- 208
+KKRKR +D+E+ Y+ + IAKEE+ K+ KR+K + E +D
Sbjct: 113 SKKRKRAPAEDLEETYMRR----IAKEEQNEQEKRRAEKAKRQKVEEEGKDSDSVSDKSK 168
Query: 209 --------------MLVHRKEEGFDDEGKLL----RTIFVGNLPLKV-----KKKTLIKE 245
+ H + G D E K L RT+F+GN+ +V KKTL+K
Sbjct: 169 DEDDESSEEEDEITVPKHETQSG-DPESKELEKSNRTVFLGNVSSQVIRSKSAKKTLLKH 227
Query: 246 FIKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKS 293
F +++S+R RSV K+P++ A +++I ++ S +AY V+ +
Sbjct: 228 LASFLSTLPESTGPHKVESIRFRSVAFASGGKVPKRAAFARREILDDTTPSTNAYAVYST 287
Query: 294 EQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
Q+ +A A N V+ H+R+D P + D K+ VFVGNL F
Sbjct: 288 VQAARKAPAALNGTVVLDRHLRVDSVAHPSQ---------IDHKRCVFVGNLDFVDNETD 338
Query: 347 DVKDEEIYQLFCGLNDLE---------------------SSVEAVRVIRHPHMRVGKGIA 385
+DE+ + G D+E +VE+VRV+R RVGKG A
Sbjct: 339 PEEDEKKKKKKSGPADVEEGLWRTFNAHTKGSKERTSTKGNVESVRVVRDRTTRVGKGFA 398
Query: 386 YVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQNCTPSKR 425
YV F + E A L+ ++ + R+LR++ A++ P KR
Sbjct: 399 YVQFYDQVCVEEALLLDGKKFPPMLPRKLRVTRAKK--LPKKR 439
>gi|389594851|ref|XP_003722648.1| putative RNA binding protein [Leishmania major strain Friedlin]
gi|323363876|emb|CBZ12882.1| putative RNA binding protein [Leishmania major strain Friedlin]
Length = 455
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI--IDTK---IPRKGAILQKQINE 280
RT+FVGNLP + K+ + K F G I +VRIR + +D + + R +L+ +I +
Sbjct: 161 RTVFVGNLPNTIHKRDVEKIFKSCGSITAVRIRCQALEELDEQHQNMGRAVRVLRGEIKK 220
Query: 281 NAD-SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL------DRACPPRKKLKGEDAPLY 333
+A S AY++F S +S +AL N + HI + RA PP
Sbjct: 221 DAKYSATAYVLFDSAKSIASALEKNGLIFHNRHIVVTTMDVESRAYPP------------ 268
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ ++F+GN+ ++ +E+++ F G+ D V+ VR++R KG YV F
Sbjct: 269 --ETSIFLGNVAYNTTEEDVWSFFQEHGIAD----VKRVRLVRDRETGDCKGFGYVEFMH 322
Query: 392 REAANLVIKRRNLKLRDRELRLSHAQQN 419
+ I+ R KL RELR+ H ++
Sbjct: 323 ASSVQPAIETRGDKLNGRELRIVHVNKS 350
>gi|402078123|gb|EJT73472.1| nucleolar protein 12 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 532
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 104/236 (44%), Gaps = 54/236 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K KK L+ IDS+R RSVP+ +P+
Sbjct: 168 KAARTVFLSNVSTEAITSKAAKKQLLAHLSSVFKKDASPPQSIDSLRFRSVPVATAAMPK 227
Query: 270 KGAILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG 327
+ A++ + + E S +AY+V+ + A+A N ++ H+R+D P
Sbjct: 228 RAAVITQAVMEATTKSANAYVVYSDTAAARVAVASLNGTIVLERHLRVDSVAHP------ 281
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGLN 361
AP+ D K+ VFVGNL F V DE + L+
Sbjct: 282 --APV-DHKRCVFVGNLGF-VDDETVMNTTVDDDGKEKTEKRKRTKVPMDVEEGLWRTFG 337
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLS 414
VE+VRV+R RVGKGIAYV F + E+A L+ ++ L R LR++
Sbjct: 338 KSAGKVESVRVVRDQTTRVGKGIAYVQFYDVNSVESALLLDGKKFPPLLPRALRVT 393
>gi|452987409|gb|EME87164.1| hypothetical protein MYCFIDRAFT_22137, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 261
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 25/191 (13%)
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQ-STEAALAFNMAVI 308
+++S+R RS P T IP+K A +K++ + S +AY+V+ +E+ + EA N ++
Sbjct: 51 KVESIRFRSTPYA-TAIPKKAAFAKKELMDATTKSTNAYVVYSTEKLAREAVRHLNGTIV 109
Query: 309 GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEE-IYQLFCGLNDLESSV 367
H+R+D P K D ++ VFVGNL F EE +++ F V
Sbjct: 110 LERHLRVDSVAHPAK---------IDNRRCVFVGNLGFPADIEEGLWRTFSK----SGKV 156
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTREA---ANLVIKRRNLKLRDRELRLSHAQQNCTPSK 424
E+VRVIR RVGKGIAYV F+ A A L+ +++ + R+LR+S A+ +
Sbjct: 157 ESVRVIRDSTTRVGKGIAYVQFEDENAVEQALLLNEKKFPPMLPRKLRVSRAK-----AP 211
Query: 425 RKDVAPAVNSP 435
+K+ P P
Sbjct: 212 KKNAKPGTGRP 222
>gi|66359446|ref|XP_626901.1| Nop12p nucleolar protein, RRM domain [Cryptosporidium parvum Iowa
II]
gi|46228092|gb|EAK88991.1| Nop12p nucleolar protein, RRM domain [Cryptosporidium parvum Iowa
II]
gi|323508733|dbj|BAJ77260.1| cgd3_3500 [Cryptosporidium parvum]
gi|323509799|dbj|BAJ77792.1| cgd3_3500 [Cryptosporidium parvum]
Length = 349
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRK--GAILQ 275
+++ ++ T+FVGN+ L + +K L+ + IK GE++S+R RS+PI +K GA L+
Sbjct: 75 NNDPRIENTLFVGNVALHISEKELLSKLEIKQGEVESMRFRSLPIHPKFASKKKVGAALE 134
Query: 276 KQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
+ N+ + +AYIV K ++ + + F+ V+ GN +RL A KG +D
Sbjct: 135 -CFSGNSSTKNAYIVLKEKERMKPIIDKFSGIVLAGNILRLTPAS------KGNQFSTFD 187
Query: 335 IKKTVFVGNLP-FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K+TVF+G LP F +DE + F ++ E V +VR+I+ KG +VLF R
Sbjct: 188 RKRTVFIGGLPKFCTEDE--LRRFVTMSLNEDCVHSVRIIKSATTGKPKGFGFVLFNDR 244
>gi|209882052|ref|XP_002142463.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558069|gb|EEA08114.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 308
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 14/186 (7%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIP---RKGAILQK 276
+ K+ RT+FVGN+ L V +K L+K+ + +I+S+R RS+P+ K + GAIL+
Sbjct: 83 DSKIDRTVFVGNIGLNVVEKDLLKKLELTRADIESIRFRSLPV-HPKFSHNRKLGAILEG 141
Query: 277 QINENADSVHAYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI 335
+ +DS +AYIV K S + E F ++ G+ +RL A ++ ++D
Sbjct: 142 -FSCKSDSKNAYIVLKDSSKVPELVKKFTGIILAGHTMRLSPAYIV------DNFNIFDR 194
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K+T+FVGNLP ++E+ Q F N + V+AVR++R KG ++LF R+
Sbjct: 195 KRTIFVGNLPSLCSEDELRQ-FVMQNIGTNCVDAVRIVRSKITGKTKGFGFILFNDRKFV 253
Query: 396 NLVIKR 401
N+ +K+
Sbjct: 254 NIALKK 259
>gi|67602925|ref|XP_666511.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657520|gb|EAL36281.1| hypothetical protein Chro.30395 [Cryptosporidium hominis]
Length = 349
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 15/204 (7%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRK--GAILQ 275
+++ ++ T+FVGN+ L + +K L+ + IK GE++S+R RS+PI +K GA L+
Sbjct: 75 NNDPRIENTLFVGNVALHISEKELLSKLEIKQGEVESMRFRSLPIHPKFASKKKVGAALE 134
Query: 276 KQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
+ N+ + +AYIV K ++ + + F+ ++ GN +RL A KG +D
Sbjct: 135 -CFSGNSSTKNAYIVLKEKERMKPIIDKFSGIILAGNILRLTPAS------KGNQFSTFD 187
Query: 335 IKKTVFVGNLP-FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
K+TVF+G LP F +DE + F ++ E V +VR+I+ KG +VLF R+
Sbjct: 188 RKRTVFIGGLPKFCTEDE--LRRFVTMSLNEDCVHSVRIIKSATTGKPKGFGFVLFNDRK 245
Query: 394 AANLVIKRRN-LKLRDRELRLSHA 416
+K N + +D ++ ++ A
Sbjct: 246 FVISSVKMLNGAQFKDSKISVTRA 269
>gi|223998584|ref|XP_002288965.1| rna-binding protein [Thalassiosira pseudonana CCMP1335]
gi|220976073|gb|EED94401.1| rna-binding protein [Thalassiosira pseudonana CCMP1335]
Length = 198
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-----DTKIPRK-GAILQKQIN 279
RTIFVGNLP + ++ L F G + S R+RS+ + + + RK A K ++
Sbjct: 5 RTIFVGNLPPDISRRALAGIFKPCGTVTSARLRSMALPPDQAGNQNLMRKVCANTGKLLS 64
Query: 280 ENA-DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+N S Y+VFKS S E AL N + IR+D A + + + + ++
Sbjct: 65 DNPKKSAQGYVVFKSVDSVEEALKLNNTTYETHTIRVDHA-----TVSSWNDEMIEPSRS 119
Query: 339 VFVGNLPFDVKDEEIYQLFC------GLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
VF+GNLP+ ++E + LF G +D + V VR++R + KG AYV F+
Sbjct: 120 VFIGNLPYGAEEETLRDLFLKGVGADGDDDEDPVVSGVRIVRDKETQKCKGFAYVTFRDA 179
Query: 393 EAANLVIKRRNLKLRDREL 411
L + K RE+
Sbjct: 180 SFVALALNLHESKYMKREI 198
>gi|85091441|ref|XP_958903.1| nucleolar protein 12 [Neurospora crassa OR74A]
gi|74696324|sp|Q7S2L7.1|NOP12_NEUCR RecName: Full=Nucleolar protein 12
gi|28920294|gb|EAA29667.1| nucleolar protein 12 [Neurospora crassa OR74A]
Length = 594
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 54/236 (22%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KK L+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTSRSAKKALMKHMASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+V+ + + A + N ++ HIR+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVYSTPAAARLACSKLNGTIVLDRHIRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------------DLESS--------- 366
P+ D K+ VFVGNL F V DE + Q+ + D+E
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDETVLQVKVDEDGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 367 --VEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
VE+VRV+R P RVGKG AYV F E+A L+ ++ + RELR+S +
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQFCDENAVESAILLNGKKFPPMLPRELRVSRCK 425
>gi|350296302|gb|EGZ77279.1| nucleolar protein 12 [Neurospora tetrasperma FGSC 2509]
Length = 594
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 54/236 (22%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF--------GEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ ++ KK L+K +++S+R RS IP++ A
Sbjct: 200 RTVFLSNVAVEAVTSRSAKKALMKHMASVLDKEAKPAQKVESIRFRSTAFATAAIPKRAA 259
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
++K + E S +AY+V+ + + A + N ++ HIR+D P A
Sbjct: 260 YIKKSVMEATTKSTNAYVVYSTPAAARLACSKLNGTIVLDRHIRVDSVAHP--------A 311
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------------DLESS--------- 366
P+ D K+ VFVGNL F V DE + Q+ + D+E
Sbjct: 312 PV-DHKRCVFVGNLGF-VDDETVLQVKVDEDGKEVTEKKKRTKQPMDVEEGLWRVFGKEG 369
Query: 367 --VEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
VE+VRV+R P RVGKG AYV F E+A L+ ++ + RELR+S +
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQFCDENAVESAILLNGKKFPPMLPRELRVSRCK 425
>gi|358336551|dbj|GAA55028.1| nucleolar protein 12 [Clonorchis sinensis]
Length = 459
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 43/221 (19%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKF-----------GEIDSVRIRSV-PIIDT--KIPR 269
L RT+FVGNLP +KK L K F ++SVR R V P+ K+ R
Sbjct: 131 LKRTLFVGNLPPGLKKTELRKLFDSVIKQDSASVQSNCRVESVRFRGVVPVTGGTGKLAR 190
Query: 270 KGAILQKQINEN-ADSVHAYIVFKSEQSTEAALAFNMAVI---------------GGNHI 313
K A++Q + + + ++ AY+V S A L+ N + G HI
Sbjct: 191 KRAVIQGEFSAGVSQNMIAYVVLTSTAGIPAGLSLNGHWLQTKPISTDTPTDYQSSGKHI 250
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R+DRA R P+ K++VF+GNLPFDV++EE+ + + VR+I
Sbjct: 251 RVDRALRHR--------PVEQFKQSVFLGNLPFDVQEEEVRSAMSKFGPIAN----VRLI 298
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIK-RRNLKLRDRELRL 413
R KG +V + A +L I+ ++ +R R +R+
Sbjct: 299 RDKETGAVKGFGFVQYTDPAAISLAIRSSESVSVRGRPIRI 339
>gi|408400703|gb|EKJ79780.1| hypothetical protein FPSE_00060 [Fusarium pseudograminearum CS3096]
Length = 555
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 138/323 (42%), Gaps = 74/323 (22%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETE---- 207
+ E K E K+ +K DD+E Y++K +A EEE + G KR+K D T+
Sbjct: 122 ATEDKSNKERKRKRKNDNDDLEGKYLDK----VAAEEEADRAG---KRQKNDALTKTEKP 174
Query: 208 -----------DMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIK 248
D+ VH K+ D K RT+F+ N+ K KKTL+
Sbjct: 175 AVDEEDAGNESDIPVHETLVKDSKASDLDKAARTVFLANVSTEAISSKSAKKTLMTHLSS 234
Query: 249 FGE--------IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEA 299
E I+S+R RSV +P++ A + K + + S +AY+V+ + +
Sbjct: 235 VLEKDATPPQTIESLRFRSVAFAGGSLPKRAAYITKSLMDSTTKSANAYVVYSTTAAART 294
Query: 300 ALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE------- 351
A N + H+R+D P +P D ++ VFVGNL F V DE
Sbjct: 295 AATKLNGTQVLDRHLRVDSVAHP--------SPT-DHRRCVFVGNLGF-VDDETVLNTNA 344
Query: 352 --------------EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EA 394
+I + + VE VRV+R RVGKG AYV F EA
Sbjct: 345 EGDTTEKKKNKTPSDIEEGLWRTFSTQGKVENVRVVRDSKTRVGKGFAYVQFYDANDVEA 404
Query: 395 ANLVIKRRNLKLRDRELRLSHAQ 417
A L+ ++ + R+LR++ A+
Sbjct: 405 ALLLDGKKFPPMLPRKLRVTRAK 427
>gi|46105869|ref|XP_380574.1| hypothetical protein FG00398.1 [Gibberella zeae PH-1]
gi|83288330|sp|Q4IQW0.1|NOP12_GIBZE RecName: Full=Nucleolar protein 12
Length = 559
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 138/323 (42%), Gaps = 74/323 (22%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETE---- 207
+ E K E K+ +K DD+E Y++K +A EEE + G KR+K D T+
Sbjct: 126 ATEDKSNKERKRKRKNDNDDLEGKYLDK----VAAEEEADRAG---KRQKNDALTKTEKP 178
Query: 208 -----------DMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLIKEFIK 248
D+ VH K+ D K RT+F+ N+ K KKTL+
Sbjct: 179 AVDEEDAGNESDIPVHETLVKDSKASDLDKAARTVFLANVSTEAISSKSAKKTLMAHLSS 238
Query: 249 FGE--------IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEA 299
E I+S+R RSV +P++ A + K + + S +AY+V+ + +
Sbjct: 239 VLEKDATPPQTIESLRFRSVAFAGGSLPKRAAYITKSLMDSTTKSANAYVVYSTTAAART 298
Query: 300 ALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE------- 351
A N + H+R+D P +P D ++ VFVGNL F V DE
Sbjct: 299 AATKLNGTQVLDRHLRVDSVAHP--------SPT-DHRRCVFVGNLGF-VDDETVLNTNA 348
Query: 352 --------------EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EA 394
+I + + VE VRV+R RVGKG AYV F EA
Sbjct: 349 EGDTTEKKKNKTPSDIEEGLWRTFSTQGKVENVRVVRDSKTRVGKGFAYVQFYDANDVEA 408
Query: 395 ANLVIKRRNLKLRDRELRLSHAQ 417
A L+ ++ + R+LR++ A+
Sbjct: 409 ALLLDGKKFPPMLPRKLRVTRAK 431
>gi|158291352|ref|XP_001237501.2| AGAP003171-PA [Anopheles gambiae str. PEST]
gi|157017734|gb|EAU77012.2| AGAP003171-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 41/245 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNLP +K+K L F K+G I ++R+R+ +T + + K++ S++
Sbjct: 111 TIFVGNLPKTIKQKDLRVMFSKYGTIQTIRLRT----NTGLK----MFNKKVLSKVPSLN 162
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+V+ S++ E A + ++ N IR+ CP KK G D K TVFVGN+
Sbjct: 163 AYVVYNSKEEMEQACQLDGEMVSNNRIRV---CPADKKQIG------DAKATVFVGNIAR 213
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
D ++++ F + +E VR I + +AYV FK + +K L
Sbjct: 214 GTTDNDLHEFFSRV----GPIEYVRQIGDKY------VAYVCFKKGVSIMKALKLNQESL 263
Query: 407 RDRELRLS-----------HAQQNCTPSKRKDVAPAVNS---PPKKFVLDSRTLGSGNRS 452
R +R+ + + + P R +P N+ P + +S G+G +
Sbjct: 264 NGRLIRVEKVDTTRTNVKVNKKGHVVPRNRLPASPGTNTAAAPAGEGKANSTGGGAGAKF 323
Query: 453 NSKVA 457
+ KVA
Sbjct: 324 HGKVA 328
>gi|340503205|gb|EGR29817.1| RNA binding motif protein 34, putative [Ichthyophthirius
multifiliis]
Length = 330
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 23/166 (13%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGN+ + K K + K F ++G+I+ + RS+P+ +KI +K AI+ KQ+ +
Sbjct: 64 RTVFVGNIHINAKSKDIQKIFKQYGKIEKIWFRSIPVEKSKIGKKAAIMLKQVKYDQQQN 123
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ + K Q ++ + + I N KKL D KT+F+GNLP
Sbjct: 124 QQFFI-KKVQRRQSWIKNSKKNIYIN------LFLNLKKL--------DYTKTIFIGNLP 168
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F + +E + F CG +++ +R+IR P+ GKG Y+ F
Sbjct: 169 FQITEEALRNHFIDCG------NIQNLRIIRDPYTHNGKGFGYIYF 208
>gi|347969404|ref|XP_312862.4| AGAP003173-PA [Anopheles gambiae str. PEST]
gi|333468509|gb|EAA44783.4| AGAP003173-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 41/245 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNLP +K+K L F K+G I ++R+R+ +T + + K+ S++
Sbjct: 111 TIFVGNLPKTIKQKDLRVMFSKYGTIQTIRLRT----NTGLK----LFNKKALSKVPSLN 162
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+V+ S++ E A + ++ N IR+ CP KK G D K TVFVGN+
Sbjct: 163 AYVVYNSQEEMEQACQLDGEMVSNNRIRV---CPADKKQIG------DAKATVFVGNIAR 213
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
D ++++ F + +E VR I + +AYV FK + +K L
Sbjct: 214 GTTDNDLHEFFSRV----GPIEYVRQIGDKY------VAYVCFKKGVSIMKALKLNQESL 263
Query: 407 RDRELRLS-----------HAQQNCTPSKRKDVAPAVNS---PPKKFVLDSRTLGSGNRS 452
R +R+ + + + P R +P N+ P + +S G+G +
Sbjct: 264 NGRLIRVEKVDTTRTNVKVNKKGHVVPRNRLPASPGANTATAPAGEGKANSTGGGAGAKF 323
Query: 453 NSKVA 457
+ KVA
Sbjct: 324 HGKVA 328
>gi|342874417|gb|EGU76431.1| hypothetical protein FOXB_13109 [Fusarium oxysporum Fo5176]
Length = 560
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 141/323 (43%), Gaps = 74/323 (22%)
Query: 152 SVEGKKRSENKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKAD--NETEDM 209
+ + K + K+ +K + DD+E Y++K + EEE ++ G KR+K D N+TE
Sbjct: 125 ATQDKSNKDRKRKRKNENDDLEGRYLDK----LVAEEEAERAG---KRQKNDALNKTEKA 177
Query: 210 LVHRKEEGFD----------------DEGKLLRTIFVGNLPL-----KVKKKTLIKEFIK 248
+ ++ G D D K RT+F+ N+ K KKTL+
Sbjct: 178 VAEDEDAGNDSDIPVHETLAKDSKSSDLEKAARTVFLANVSTEAINSKAAKKTLMAHLSS 237
Query: 249 FGE--------IDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFK-SEQSTE 298
+ I+S+R RSV +P++ A + K + + S +AY+V+ S + +
Sbjct: 238 ILDKDATPPQTIESLRFRSVAFAGGSLPKRAAYITKSLMDATTKSANAYVVYSTSAAARK 297
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
AA N + H+R+D P +P D ++ VFVGNL F V DE +
Sbjct: 298 AAAELNGTQVLERHLRVDSVAHP--------SPT-DHRRCVFVGNLGF-VDDETVLNTNA 347
Query: 359 GLNDLE---------------------SSVEAVRVIRHPHMRVGKGIAYVLF---KTREA 394
+ E VE VRV+R RVGKG AYV F EA
Sbjct: 348 DGDTTEKKKNKTPSDVEEGLWRTFSTQGKVENVRVVRDSKTRVGKGFAYVQFYDGNDVEA 407
Query: 395 ANLVIKRRNLKLRDRELRLSHAQ 417
A L+ ++ + R+LR++ A+
Sbjct: 408 ALLLDGKKFPPMLPRKLRVTRAK 430
>gi|302667361|ref|XP_003025267.1| RNA binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291189365|gb|EFE44656.1| RNA binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 551
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 58/244 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG---------------EIDSVRIRSVPI 262
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 194 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSTTTPSTTHKIESLRFRSTAF 253
Query: 263 IDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
T +PR+ A +K++ + +AY+V+ + + + AL N ++ HIR+D P
Sbjct: 254 SSTALPRRAAYAKKELMDSTTKGTNAYVVYSTAVAAKKALKLNGTIVLDRHIRVDSVSKP 313
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQLF 357
AP+ D + VFVGNL F DV +E +++ F
Sbjct: 314 --------APV-DHTRCVFVGNLGFVDEEAQPADQDGEVKKKKKAAAAADV-EEGLWRTF 363
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLS 414
E VE+VRV+R RVGKG AYV FK EAA L ++ + R+LR++
Sbjct: 364 NDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFKDENCVEAALLCDGKKFPPMLPRKLRVT 423
Query: 415 HAQQ 418
A++
Sbjct: 424 RAKR 427
>gi|70983440|ref|XP_747247.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|74667235|sp|Q4WCH5.1|NOP12_ASPFU RecName: Full=Nucleolar protein 12
gi|66844873|gb|EAL85209.1| RNA binding protein, putative [Aspergillus fumigatus Af293]
Length = 538
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 67/268 (25%)
Query: 212 HRKEEGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEFIKF----------GEI 252
H + G D E K L RT+F+GN + K KKTL+K F ++
Sbjct: 186 HETQSG-DPESKELEKSNRTVFLGNVSSQAIKSKSAKKTLLKHLASFLSTLPESTGPHKV 244
Query: 253 DSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIG 309
+S+R RSV K+P++ A +++I ++ S +AY+V+ + Q+ +A A N V+
Sbjct: 245 ESIRFRSVAFASGGKVPKRAAFARREILDDTTPSTNAYVVYSTVQAARKAPAALNGTVVL 304
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL----------------------PFD 347
H+R+D P + D K+ VFVGNL P D
Sbjct: 305 DRHLRVDSVAHPSQ---------IDHKRCVFVGNLDFVDNETDPEEDDKKKKKKKSGPAD 355
Query: 348 VKDEEIYQLFCGLN-------DLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANL 397
V +E +++ F +VE+VRV+R RVGKG AYV F + E A L
Sbjct: 356 V-EEGLWRTFNAHTKGSKERASTRGNVESVRVVRDRTTRVGKGFAYVQFYDQVCVEEALL 414
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKR 425
+ ++ + R+LR++ A++ P KR
Sbjct: 415 LDGKKFPPMLPRKLRVTRAKK--LPKKR 440
>gi|171695272|ref|XP_001912560.1| hypothetical protein [Podospora anserina S mat+]
gi|170947878|emb|CAP60042.1| unnamed protein product [Podospora anserina S mat+]
Length = 516
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 142/332 (42%), Gaps = 76/332 (22%)
Query: 152 SVEGKKRSENKKTKKRKR------DDVEKDYVEK--------KYGVIAKEEEGKKVGVGE 197
S K ++E + +KRKR +D+E Y E+ + G K+ GK V +
Sbjct: 45 SAAAKSKAEEEDGRKRKRKQRNDDEDLEAKYFERLQEDDEEERSGKRRKDANGKAAAVEK 104
Query: 198 KRKKADNETE---DMLVHRKE-----EGFDDEGKLLRTIFVGNLPL-----KVKKKTLIK 244
K D +++ D V + E + + K RT+F+ N+ L + KKTL+K
Sbjct: 105 TEKTGDKDSDLDSDAEVPKHESLTANDAASELEKANRTVFLSNVSLEATTSRTAKKTLLK 164
Query: 245 EFIKFGE--------IDSVRIRSVPIIDTKIPRKGAILQKQINE-NADSVHAYIVFKSEQ 295
+ ++S+R RS IP++ A ++K++ E +AY V+ + +
Sbjct: 165 HLASILDPKADPPQKVESIRFRSTAFATAAIPKRAAFIKKEVMEATTKCTNAYAVYSTPE 224
Query: 296 STEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIY 354
+ A+ N V+ H+R+D P AP+ D K+ VFVGNL F V DE +
Sbjct: 225 AVRLAVQKLNGTVVLDRHLRVDSVAHP--------APV-DHKRCVFVGNLGF-VDDETVL 274
Query: 355 Q--------------------------LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
L+ VE+VRV+R RVGKGIAYV
Sbjct: 275 NVKVDDEGNQTTTKKKRTKQPMDVEEGLWRVFGKEAGKVESVRVVRDNVTRVGKGIAYVQ 334
Query: 389 F---KTREAANLVIKRRNLKLRDRELRLSHAQ 417
F E A L+ ++ + RELR+S +
Sbjct: 335 FYDGNDVEKAILLEGKKFPPMLPRELRVSRCK 366
>gi|290990600|ref|XP_002677924.1| NOP12_SCHPO nucleolar protein 12-like protein [Naegleria gruberi]
gi|284091534|gb|EFC45180.1| NOP12_SCHPO nucleolar protein 12-like protein [Naegleria gruberi]
Length = 377
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 227 TIFVGNLP-------LKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQI 278
TIF+ N P LK KK + K F +GEI+S+R RS+ +KIP RKG +
Sbjct: 165 TIFISNFPIPLEDKNLKKSKKLVTKLFSVYGEIESIRFRSLGFEKSKIPTRKGHLAAGLR 224
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
++ +V+ + + + ++ N V+ G H+ +D A D+ +
Sbjct: 225 TKDYGTVYVHFSEMTAEMSKIISDLNGKVLHGRHLNVDTASHKETSKDENDS-------S 277
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+F+ NLPF++ DEE+++ E + VR++R P KG YV K +E +
Sbjct: 278 IFIQNLPFEIDDEEVWETIGS----EHEIVRVRIVRDPISGKCKGFGYVQLKDKETVEEI 333
Query: 399 IK 400
+K
Sbjct: 334 LK 335
>gi|115491023|ref|XP_001210139.1| nucleolar protein 12 [Aspergillus terreus NIH2624]
gi|114196999|gb|EAU38699.1| nucleolar protein 12 [Aspergillus terreus NIH2624]
Length = 532
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 58/241 (24%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDT-KIPR 269
RT+F+GN+ K KKTL++ +++S+R RS KIP+
Sbjct: 201 RTVFLGNVSSEAIKSKSAKKTLLRHLASVLSTLPESTGPHKVESIRFRSTAFASGGKIPK 260
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
+ A ++++ +E S +AY V+ + Q AL+ N V+ H+R+D P K
Sbjct: 261 RAAFAKRELLDETTPSTNAYAVYSTIQGARKALSLNGTVVLDRHLRVDSVAHPAK----- 315
Query: 329 DAPLYDIKKTVFVGNL--------------------PFDVKDEEIYQLFC--------GL 360
D K+ VFVGNL P DV +E +++ F G
Sbjct: 316 ----IDNKRCVFVGNLDFVDQEGEMEGEEKKKKKRAPADV-EEGLWRTFNAHTGGSKKGD 370
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNL-KLRDRELRLSHAQ 417
+ + SVE+VRV+R RVGKG AYV F L++ +N + R++R+S A+
Sbjct: 371 DAKKGSVESVRVVRDRATRVGKGFAYVQFYDENCVEEALLLNGKNFPPMLPRKIRVSRAK 430
Query: 418 Q 418
+
Sbjct: 431 K 431
>gi|159123747|gb|EDP48866.1| RNA binding protein, putative [Aspergillus fumigatus A1163]
Length = 538
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 65/267 (24%)
Query: 212 HRKEEGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEFIKF----------GEI 252
H + G D E K L RT+F+GN + K KKTL+K F ++
Sbjct: 186 HETQSG-DPESKELEKSNRTVFLGNVSSQAIKSKSAKKTLLKHLASFLSTLPESTGPHKV 244
Query: 253 DSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIG 309
+S+R RSV K+P++ A +++I ++ S +AY+V+ + Q+ +A A N V+
Sbjct: 245 ESIRFRSVAFASGGKVPKRAAFARREILDDTTPSTNAYVVYSTVQAARKAPAALNGTVVL 304
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF-------DVKDEEIYQLFCGLND 362
H+R+D P + D K+ VFVGNL F + D++ + G D
Sbjct: 305 DRHLRVDSVAHPSQ---------IDHKRCVFVGNLDFVDNETDPEEDDKKKKKKKSGPAD 355
Query: 363 LE---------------------SSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLV 398
+E +VE+VRV+R RVGKG AYV F + E A L+
Sbjct: 356 VEEGLWRTFNAHTKGSKERASTRGNVESVRVVRDRTTRVGKGFAYVQFYDQVCVEEALLL 415
Query: 399 IKRRNLKLRDRELRLSHAQQNCTPSKR 425
++ + R+LR++ A++ P KR
Sbjct: 416 DGKKFPPMLPRKLRVTRAKK--LPKKR 440
>gi|240275476|gb|EER38990.1| nucleolar protein [Ajellomyces capsulatus H143]
gi|325091313|gb|EGC44623.1| nucleolar protein 12 [Ajellomyces capsulatus H88]
Length = 613
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 152/361 (42%), Gaps = 114/361 (31%)
Query: 162 KKTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK--------------KADN 204
+K +KRKR +D+E+ Y+ + AKE+E ++ +++K + DN
Sbjct: 131 EKRRKRKRGGAEDIEESYMRRMAKEEAKEDEKRRSEKAKRQKIVESVGRESDSSDSERDN 190
Query: 205 ETEDMLVHRKEEGFDD------------EGKLL----RTIFVGNLPL-----KVKKKTLI 243
E + E+G D+ + LL RTIF+ N+ K KKTL+
Sbjct: 191 EEGEDGTSDDEDGIDNPPIVHESNSNKPDAALLDKSARTIFLSNVSTEAIKSKSAKKTLL 250
Query: 244 KEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFK 292
K F +I+S+R RS +P++ A ++++ + S +AY+V+
Sbjct: 251 KHLCSFFPSIPESATPHKIESIRFRSTAFSTQSMPKRAAYAKRELMDSTTRSTNAYVVYS 310
Query: 293 SEQSTEAA-LAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL------- 344
+ + A A N ++I H+R+D P AP+ D K+ +FVGNL
Sbjct: 311 TTAAARGAPRALNGSIILDRHLRVDSVAHP--------API-DYKRCIFVGNLGFVDEET 361
Query: 345 ----------------------PFDVKDEEIYQLF-----CGLNDLESS----------- 366
P DV +E +++ F G + SS
Sbjct: 362 PTDEQVAGQQKEKKKRKQKHAPPADV-EEGLWRTFNEHTAAGKSADPSSNKISKDTGPYP 420
Query: 367 ------VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK---LRDRELRLSHAQ 417
VE+VRVIR P R+GKG+AYV F+ A + + K L R+LR++ A+
Sbjct: 421 NLGGGPVESVRVIRDPATRIGKGVAYVQFRDENAVEMALLLDGQKFPPLLPRKLRVTRAK 480
Query: 418 Q 418
+
Sbjct: 481 R 481
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 240 KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI-LQKQINENADSVHAYIVFKSEQSTE 298
K ++K FG ++S+R RSV + K+P + A L KQ+ + + Y+V ++E+S
Sbjct: 1 KDILKLVSPFGPVESLRQRSVAVSPGKLPVEVARKLGKQLT--GTTTNFYVVMETEESAS 58
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF- 357
A L N + G HIR+D A P D +VFVGN+PF +E++ ++F
Sbjct: 59 ACLELNGREVDGRHIRVDLA-----------TPTNDTHCSVFVGNVPFGADEEKLRKVFE 107
Query: 358 -CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSH 415
CG ++ +R+I+ + KG AYV FK + K+ +++ R+LR+
Sbjct: 108 SCG------PIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACKKNERIEVEGRKLRVFR 161
Query: 416 AQQN 419
+ +
Sbjct: 162 CRSD 165
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G+ ++K D TED + + DD ++ +FVG L V L KEF KFGE+ S
Sbjct: 375 GKNKRKGD--TEDGSAKKAKT--DDASGDIKNLFVGGLSWNVDDDWLKKEFEKFGEVISA 430
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIR 314
R+ I +G K Y+ F S E + +A A I G I
Sbjct: 431 RV---------ITERGTERSKGFG--------YVDFASPEDARKAVEAMAGTEIDGRTIN 473
Query: 315 LDRACP-----PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+D + P P++K L T+F+GNLPF + +Y+ F D+ S
Sbjct: 474 VDFSAPKPERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVYEAFSEYGDINS---- 529
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAANLVI---KRRNLKLRDRELRLSHAQ 417
VR+ P KG YV F T+EAA + + + + R+ RL ++Q
Sbjct: 530 VRLPTDPETERIKGFGYVEFATQEAATAAVNVGRGDGIYIDQRQARLDYSQ 580
>gi|242799056|ref|XP_002483297.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218716642|gb|EED16063.1| RNA binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 536
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 117/261 (44%), Gaps = 64/261 (24%)
Query: 226 RTIFVGNLPLKV-----KKKTLIKEFIKF----------GEIDSVRIRSVPI-IDTKIPR 269
RT+F+GN+ K KK L+ F +I+S+R RS +PR
Sbjct: 204 RTVFLGNVSNKAITSKSDKKALLAHISSFLPSLPKSHTPHKIESIRFRSTAYGTQQGVPR 263
Query: 270 KGAILQKQ-INENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A K+ ++ S +AY+VF + + + A A N V+ G H+R+D P
Sbjct: 264 RAAYAHKETMDSTTLSTNAYVVFSTSIAAQKAPGALNGTVVLGRHLRVDNIAHPA----- 318
Query: 328 EDAPLYDIKKTVFVGNL-----------------------PFDVKDEEIYQLF---CGL- 360
D K+ VFVGNL P DV +E +++ F G+
Sbjct: 319 ----AIDNKRCVFVGNLDFVGQENDAEGDEENPKKKKNTPPADV-EEGLWRTFNANTGVA 373
Query: 361 ---NDLESSVEAVRVIRHPHMRVGKGIAYVLFK---TREAANLVIKRRNLKLRDRELRLS 414
N +VE+VRV+R RVGKG AYV F EAA L+ ++ L R+LR++
Sbjct: 374 EKKNAAGGNVESVRVVRDQATRVGKGFAYVQFHDPNCVEAALLLDGKKFPPLLPRKLRVT 433
Query: 415 HAQQNCTPSKRKDVAPAVNSP 435
A++ SK++D P +P
Sbjct: 434 RARKM---SKKRDANPPRRAP 451
>gi|121719695|ref|XP_001276546.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119404758|gb|EAW15120.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 536
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 59/242 (24%)
Query: 226 RTIFVGNLP-----LKVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDT-KIPR 269
RT+F+GN+ K KKTL+K F +++S+R RSV K+P+
Sbjct: 197 RTVFLGNVSNEAIKSKSGKKTLLKHLASFLSTLPESTGPHKVESIRFRSVAFASGGKVPK 256
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ ++ + ++ S +AY V+ + Q+ +A A N V+ H+R+D P
Sbjct: 257 RADFARRDVLDDTTPSTNAYAVYSTIQAARKAPAALNGTVVLDRHLRVDSIAHP------ 310
Query: 328 EDAPLYDIKKTVFVGNL---------------------PFDVKDEEIYQLFC----GLND 362
+P+ D K+ VFVGNL P DV +E +++ F G D
Sbjct: 311 --SPV-DNKRCVFVGNLDFVDNETNPDDDEKKKKKRSVPADV-EEGLWRTFNVQTKGSKD 366
Query: 363 LESS---VEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHA 416
SS VE+VRV+R P RVGKG AYV F E A L+ ++ + R+LR++ A
Sbjct: 367 KSSSRGNVESVRVVRDPITRVGKGFAYVQFYDANCVEQALLLDGKKFPPMLPRKLRVTRA 426
Query: 417 QQ 418
++
Sbjct: 427 KK 428
>gi|320586227|gb|EFW98906.1| nucleolar protein 12 [Grosmannia clavigera kw1407]
Length = 530
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 46/202 (22%)
Query: 249 FGEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMA 306
++S+R RSVP +P++ A + K + A + +AY V+ + + A+ N
Sbjct: 203 LATVESLRFRSVPFATAAMPKRAAFITKAVMGATAQATNAYAVYSTAAAARQAVRQLNGT 262
Query: 307 VIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIY------------ 354
V+ G H+R D P D ++ VFVGNL F + DEE+
Sbjct: 263 VVLGRHLRADSVAHPAA---------VDHRRCVFVGNLGF-MDDEEVMVTPDEAKTDEDG 312
Query: 355 -------------------QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF---KTR 392
L+ +VE+VRV+R P RVGKG AYV F +
Sbjct: 313 QPAEPTKRKRFKVPMDVEEGLWRTFGKHAGAVESVRVVRDPATRVGKGFAYVQFVDGTSV 372
Query: 393 EAANLVIKRRNLKLRDRELRLS 414
EAA L+ R+ L RELR+S
Sbjct: 373 EAALLLAGRKFPPLLPRELRVS 394
>gi|157133021|ref|XP_001662743.1| hypothetical protein AaeL_AAEL012618 [Aedes aegypti]
gi|108870976|gb|EAT35201.1| AAEL012618-PA [Aedes aegypti]
Length = 557
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 27/187 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IF+GNLP VKK T+ F ++G+I ++R RS I + +K+ + A +++
Sbjct: 305 SIFIGNLPNTVKKSTMKSLFNQYGKILTIRFRSNDGI--------TLFKKKDRKEAKALN 356
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
YI F+++ +AA A N ++ GN IR+ + + TVFVGN+
Sbjct: 357 CYIRFETKPEAQAACAMNGQLVEGNRIRVTMHMQKQ---------MGHASSTVFVGNINR 407
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
D E+Y F + + +E VR I KGI YV FK + +K L
Sbjct: 408 KTTDNELYDFFSRVGE----IEYVRQI------ADKGIGYVCFKKGVSIAKALKMNEQML 457
Query: 407 RDRELRL 413
R LR+
Sbjct: 458 NARPLRI 464
>gi|212541320|ref|XP_002150815.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068114|gb|EEA22206.1| RNA binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 540
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 62/255 (24%)
Query: 226 RTIFVGN-----LPLKVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTK-IPR 269
RT+F+GN + K KK L+ F +I+S+R RS K +PR
Sbjct: 207 RTVFLGNVSNSAITSKSDKKALLAHLSSFLSKLPKSDTAHKIESIRFRSTAYGTEKGVPR 266
Query: 270 KGAILQKQ-INENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A K+ ++ S +AY+V+ + + + A A N V+ G H+R+D P
Sbjct: 267 RAAFAHKETMDSTTLSTNAYVVYSTPIAAQKAPGALNGTVVLGRHLRVDNVAHP------ 320
Query: 328 EDAPLYDIKKTVFVGNLPF-----DVKDEE-----------------IYQLF---CGL-- 360
D K+ VFVGNL F D D+E +++ F G+
Sbjct: 321 ---AAIDNKRCVFVGNLDFVGQEKDENDDEETPKKKKNSPPADVEEGLWRTFNANTGVAG 377
Query: 361 --NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSH 415
N +VE+VRV+R RVGKG AYV F EAA L+ ++ L R+LR++
Sbjct: 378 KKNAGGGNVESVRVVRDQATRVGKGFAYVQFHDENCVEAALLLDGKKFPPLLPRKLRVTR 437
Query: 416 AQQNCTPSKRKDVAP 430
A++ SK++D P
Sbjct: 438 ARKM---SKKRDSNP 449
>gi|67521990|ref|XP_659056.1| hypothetical protein AN1452.2 [Aspergillus nidulans FGSC A4]
gi|74598186|sp|Q5BDC8.1|NOP12_EMENI RecName: Full=Nucleolar protein 12
gi|40745426|gb|EAA64582.1| hypothetical protein AN1452.2 [Aspergillus nidulans FGSC A4]
gi|259486763|tpe|CBF84884.1| TPA: Nucleolar protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q5BDC8]
[Aspergillus nidulans FGSC A4]
Length = 520
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 105/389 (26%)
Query: 116 LGFEPNGTIEN-EIKKEHSSNVGSES-----YLNRQKQNSNFSVEGKKRSENKKTKKRKR 169
LG P I + E +E SS+ G++S ++ ++ + + E + ++KRKR
Sbjct: 52 LGAAPKTKITDVEKDEEESSSAGNDSASEDQFMEDAPESPDAAEEAVQAVPEPPSRKRKR 111
Query: 170 ---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKA---------------------DNE 205
+D+E+ Y+ + +AKEE+ + +K+++A D E
Sbjct: 112 AAGEDLEESYMRR----LAKEEQKE-----QKKRRAERSSSLEEESEDGEKESPQSEDGE 162
Query: 206 TED----MLVHRKEEGF---DDE-GKLLRTIFVGNLPLKV-----KKKTLIKEFIKF--- 249
+ED + H G DDE K RT+F+GN+ K KK L+K F
Sbjct: 163 SEDEGADIPKHEALAGAANDDDELSKSNRTVFLGNVSTKAITSKSAKKELMKHLSSFLST 222
Query: 250 -------GEIDSVRIRSVPIIDT-KIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEAA 300
+IDS+R RS KIP++ A +++I+++ S +AY V+ + Q+ + A
Sbjct: 223 LPESTGPHKIDSIRFRSTAFASGGKIPKRAAFAKQEIHDDTTPSTNAYAVYSTAQAAKKA 282
Query: 301 LA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL--------------- 344
A N V+ H+R+D P K D K+ VFVGNL
Sbjct: 283 PAALNGTVVLDRHLRVDNVAHPAK---------VDHKRCVFVGNLDFIDNETGTEEGEKK 333
Query: 345 -----PFDVKDEEIYQLFCGLNDLESS-------VEAVRVIRHPHMRVGKGIAYVLFKTR 392
P DV +E +++ F S VE+VRV+R RVGKG AYV F +
Sbjct: 334 KKNRPPADV-EEGLWRTFNAHTKASQSGPAGRGNVESVRVVRDRSTRVGKGFAYVQFYDQ 392
Query: 393 ---EAANLVIKRRNLKLRDRELRLSHAQQ 418
E A L+ +R L R+LR+ A++
Sbjct: 393 NCVEEALLLNDKRFPPLLPRKLRVVRAKK 421
>gi|429329920|gb|AFZ81679.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 321
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 227 TIFVGNLPLKVKKKT-LIKEF-IKFGEIDSVRIRSVPIIDTKIP--RKGAILQKQINENA 282
+F+GN+PL +K K+ LIK+ + + SV RS+P+ D K +K I++++ +
Sbjct: 103 VVFIGNVPLSIKTKSDLIKKLNLDPKIVKSVHFRSLPV-DPKFASNKKVGIIKQKFTDAK 161
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +AY+ SE+ L N + G H+ ++ P + KKTVFVG
Sbjct: 162 DTQNAYVKLVSEEYLCDILNKNTIEVDGKHLFINATSP-------NSFSKFSRKKTVFVG 214
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
LP ++E++ LF + S V++VR+IR P KG +V F TR A
Sbjct: 215 RLPPSTNEDELFNLFSNV----SPVKSVRIIRDPKTLKSKGFGFVEFDTRIAV 263
>gi|255953657|ref|XP_002567581.1| Pc21g05350 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589292|emb|CAP95432.1| Pc21g05350 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 521
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 56/210 (26%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFG----------EIDSVRIRSVPIIDTK-IPR 269
RT+F+GN+ K KKTL++ F +I+S+R RSV IP+
Sbjct: 191 RTVFLGNVSTEAIKSKTAKKTLLRHLTSFCSTLPESTGPHKIESIRFRSVAFASGGGIPK 250
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ + +++I +E S +AY V+ S Q+ +A A N ++ H+R+D P +
Sbjct: 251 RASFAKREILDETTPSTNAYAVYTSLQAARKAPAALNGTIVLDRHLRVDSLAHPAE---- 306
Query: 328 EDAPLYDIKKTVFVGNLPF----------------------DVKDEEIYQLF---CGLND 362
D K+ VFVGNL F D+ +E ++++F G D
Sbjct: 307 -----IDHKRCVFVGNLSFIDSETPEEDEKTGKKKKVRAPADI-EEGLWRIFNAHTGGKD 360
Query: 363 ---LESSVEAVRVIRHPHMRVGKGIAYVLF 389
++ +VE VRVIR RVGKG AYV F
Sbjct: 361 KKAVKKNVEFVRVIRDSTTRVGKGFAYVQF 390
>gi|238508431|ref|XP_002385409.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
gi|317157950|ref|XP_001826678.2| nucleolar protein 12 [Aspergillus oryzae RIB40]
gi|220688928|gb|EED45280.1| RNA binding protein, putative [Aspergillus flavus NRRL3357]
Length = 527
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 145/335 (43%), Gaps = 93/335 (27%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEE---EGKKVGVGEKRKKADNETEDMLV------ 211
++KRKR +D+E+ Y+ + IAKEE E K+ KR+K + E ED
Sbjct: 104 SRKRKRAAGEDLEESYMRR----IAKEEQKEEQKRRAEKAKRQKGEGEEEDEATSTDKSD 159
Query: 212 ------------------HRKEEG---FDDEGKLLRTIFVGNLP-----LKVKKKTLIKE 245
H G D K RT+F+ N+ K KKTL+K
Sbjct: 160 DENEDESSDEDEEVAIPKHETVTGDAQSSDIDKSNRTVFLSNVSNEAIKSKSAKKTLLKH 219
Query: 246 FIKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKS 293
F F +++S+R RS KIP++ A ++++ +E S +AYIV+ +
Sbjct: 220 FESFLSTLPESTGPHKVESIRFRSTAFASGGKIPKRAAFAKREVLDETTPSTNAYIVYST 279
Query: 294 EQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
Q+ +A +A N V+ H+R+D P AP+ D K+ VFVGNL F
Sbjct: 280 VQAARKAPVALNGTVVLDRHVRVDSVAHP--------APV-DNKRCVFVGNLNFVDQEGN 330
Query: 347 -------------DVKDEEIYQLFCGLND-------LESSVEAVRVIRHPHMRVGKGIAY 386
+E +++ F +VE+VRV+R RV KG AY
Sbjct: 331 ADDEEKPKKKKAPADVEEGLWRTFNAHTSKPKDQATRRGNVESVRVVRDSVTRVSKGFAY 390
Query: 387 VLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQ 418
V F + E A L+ ++ L R+LR+ A++
Sbjct: 391 VQFYDQNCVEEALLLNGKQFPPLLPRKLRVMRAKK 425
>gi|156089293|ref|XP_001612053.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154799307|gb|EDO08485.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 344
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPR--KGAILQKQINENAD 283
+F+GN+PL + K LIK+ I + S+ RS+P+ ++K R + I++ + ++
Sbjct: 117 VVFIGNVPLSLDKSQLIKKLGIDPKIVQSIYFRSLPV-ESKFARNKRVGIIRGKFSDAKS 175
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ +AY+ E+ + LA N I G+++ +++ P ++ KKT+FVG
Sbjct: 176 TQNAYVKLVDEKYVDTLLAKNTMEIDGHYLFINKNSP-------SSFSKFNRKKTIFVGR 228
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
LP + E++ +F + S+V+ VR+IR P KG +V F R A
Sbjct: 229 LPKSTTENELFDVFSNV----SAVKGVRIIRDPQTHESKGFGFVAFDERNAV 276
>gi|71657336|ref|XP_817185.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882360|gb|EAN95334.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 421
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 48/339 (14%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKKGIKSNKHLRHALHENKEEES---RTVFVGNLVNDVKRRIVEKVFKNCGAI 154
Query: 253 DSVRIRSVPIIDT------------KIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEEGRRNENRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
AL N V+ G HI + ++ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVTTMDAKSRE--------YAPETSVFIGNIAYDTNEEMVWNFF-- 264
Query: 360 LNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
LE V VR +R R KG YV F++ + + I R L RE+R+ H
Sbjct: 265 ---LEKGVTDVRRVRLVRDRDTGSCKGFGYVEFRSPASVSRAIAVRGSHLNGREMRIVHV 321
Query: 417 QQNCTPS--------KRKDVAPAV-----NSPPKKFVLDSRTLGSGNRSNSKVAMSYQGL 463
Q++ S KRK A A N K L + G+ +N++ S+ G+
Sbjct: 322 QKSRVVSATKTSRREKRKREAQAAAGRGQNDEKKTKKLRAEEKGTKRHANAEGEFSWMGV 381
Query: 464 QASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKR 502
S +KK+ +V+ K+ R G R V+ + R
Sbjct: 382 VTS---PRKKIPKDLRPLVEGKRGRPASGLRASVRRKMR 417
>gi|407860762|gb|EKG07479.1| RNA binding protein, putative [Trypanosoma cruzi]
Length = 421
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 150/339 (44%), Gaps = 48/339 (14%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKKGIKSNKHLRHALHENKEEES---RTVFVGNLVNDVKRRIVEKVFKNCGAI 154
Query: 253 DSVRIRSVPIIDT------------KIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEEGNRNENRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
AL N V+ G HI + ++ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVTTMDAESRE--------YAPETSVFIGNIAYDTNEEMVWNFF-- 264
Query: 360 LNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
LE V VR +R R KG YV F++ + + I R L RE+R+ H
Sbjct: 265 ---LEKGVTDVRRVRLVRDRDTGSCKGFGYVEFRSPASVSRAIAVRGSHLNGREMRIVHV 321
Query: 417 QQNCTPS--------KRKDVAPAV-----NSPPKKFVLDSRTLGSGNRSNSKVAMSYQGL 463
Q++ S KRK A A N K L + G+ ++N++ S+ G+
Sbjct: 322 QKSRAVSATKTSRREKRKREAQAAAGRGQNDEKKTKKLRAEEKGTKRQANAEGEFSWMGV 381
Query: 464 QASKSCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKR 502
S +KK+ +V+ K+ R G R V+ + R
Sbjct: 382 VTS---PRKKIPKDLRPLVEGKRGRPASGLRAPVKRKMR 417
>gi|170034332|ref|XP_001845028.1| RNA-binding protein 34 [Culex quinquefasciatus]
gi|167875661|gb|EDS39044.1| RNA-binding protein 34 [Culex quinquefasciatus]
Length = 468
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IFVGNLP +KK + K F+ +G I ++R R+ + ++ +K+ + A S+
Sbjct: 215 SIFVGNLPTAIKKGAIKKLFMPYGRILTIRFRTSDGV--------SLFKKKDRKEAKSLI 266
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F +++ + AA A N ++ N IR+ L I TVFVGN+
Sbjct: 267 CYVRFTTKEESIAACAMNGQMVEENRIRVSLQTQKH---------LGHIASTVFVGNISR 317
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
D E+Y F + + +E VR I KGI YV FK + +K +L
Sbjct: 318 KTTDNELYDFFGQVGE----IEYVRQISD------KGIGYVCFKKGVSIAKALKLNQQQL 367
Query: 407 RDRELRLSHAQQN 419
R LR+S N
Sbjct: 368 NGRPLRISKVDPN 380
>gi|340520494|gb|EGR50730.1| predicted protein [Trichoderma reesei QM6a]
Length = 557
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 126/290 (43%), Gaps = 53/290 (18%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLVHR---KEEGFDDEGKLLR 226
DD+E+ Y+ K E GK++ E+ D++ E VH +E + K R
Sbjct: 144 DDLEEKYLAKLADDDEPEPSGKRLKGQEEDADKDSDDE-QPVHESLTQESKQSEMEKAAR 202
Query: 227 TIFVGNLPL-----KVKKKTLIKEFIKFGE--------IDSVRIRSVPIIDTKIPRKGAI 273
T+F+GN+ K KK L+K + I+S+R RSV +P++ A
Sbjct: 203 TVFLGNVATEAISSKSAKKELMKHLASVLDKDASPPEKIESLRFRSVAFSTGSMPKRAAY 262
Query: 274 LQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
+ K + + S +AY VF + + +A N + G HIR+D P +P
Sbjct: 263 ITKSLMDATTKSTNAYAVFSTPAAVRKVVAELNGTEVLGRHIRVDSVAHP--------SP 314
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE---------------------SSVEAV 370
+ + + VFVGNL F V DE + G +E VE V
Sbjct: 315 M-NHRACVFVGNLGF-VDDETVISQKAGGETVEKKRNKVPSDIEEGLWRTFGTQGKVENV 372
Query: 371 RVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
RV+R RVGKG AYV F EAA L+ ++ + R LR++ A+
Sbjct: 373 RVVRDSKTRVGKGFAYVQFYDANDVEAALLLNGKKFPPMLPRPLRVTRAK 422
>gi|358391644|gb|EHK41048.1| hypothetical protein TRIATDRAFT_130480 [Trichoderma atroviride IMI
206040]
Length = 546
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 56/294 (19%)
Query: 170 DDVEKDYVEKKYGVIAKEEEGKKV-GVGEKRKKADNET---EDMLVHR---KEEGFDDEG 222
DD+E+ Y+ K E GK+ G GE K+ +E + + VH +E +
Sbjct: 134 DDLEEKYLAKLADDDESEPSGKRQKGEGEDAKEGASEEEEEDAVPVHESLTQESKQSETE 193
Query: 223 KLLRTIFVGNLPLK-VKKKTLIKEFIKF------------GEIDSVRIRSVPIIDTKIPR 269
K RT+F+GN+ + + K+ KE +K +I+S+R RSV +P+
Sbjct: 194 KATRTVFLGNVATEAISSKSAKKELMKHLASVLDKDASPPQKIESLRFRSVAFSAGSMPK 253
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + + S +AY VF + +A N I G HIR+D P
Sbjct: 254 RAAYITKALMDATTKSTNAYAVFSDPAAARKVVAELNGTEILGRHIRVDSVAHP------ 307
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE---------------------SS 366
+P+ + + VFVGNL F V DE + + +E
Sbjct: 308 --SPM-NHRSCVFVGNLGF-VDDETVLNRQADGDTVEKKRNKVPSDIEEGLWRTFGTKGK 363
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
VE VRVIR RVGKG AYV F EAA L+ K++ + R LR++ A+
Sbjct: 364 VENVRVIRDSKTRVGKGFAYVQFYDANDVEAALLLDKKKFPPMLPRALRVTRAK 417
>gi|346324418|gb|EGX94015.1| nucleolar protein 12 [Cordyceps militaris CM01]
Length = 552
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 68/265 (25%)
Query: 203 DNETEDMLVHR---KEEGFDDEGKLLRTIFVGNLPL-----KVKKKTLI--------KEF 246
D + ED+ H K+ + K RT+F+ N+ K KK L+ KE
Sbjct: 177 DADKEDLPTHESLSKDSAAAETNKAARTVFLANVSAEAVSSKAAKKQLLAHLATALDKEA 236
Query: 247 IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE-NADSVHAYIVFKSEQSTEAAL---- 301
+++S+R RSV +P++ A + K + E S +AY+VF ST+AA
Sbjct: 237 QPLQKVESIRFRSVAFSTGSMPKRAAYITKSVMEATTHSTNAYVVF----STDAAARRVC 292
Query: 302 -AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI------- 353
N I G H+R+D P ++ VFVGNL F V DE +
Sbjct: 293 QQLNGTEILGRHLRVDSVAHPSPTAH---------RRCVFVGNLGF-VDDETVLNTNKDG 342
Query: 354 ------------------YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF---KTR 392
++LF VE VRV+R P RVGKG AYV F
Sbjct: 343 DKGTKKRNKVPSDVEEGLWRLFSK----NGKVENVRVVRDPKTRVGKGFAYVQFYDANAV 398
Query: 393 EAANLVIKRRNLKLRDRELRLSHAQ 417
E A L+ + + R+LR++ A+
Sbjct: 399 EEAILLDGKSFPPMLPRKLRVTRAK 423
>gi|330906317|ref|XP_003295431.1| hypothetical protein PTT_00922 [Pyrenophora teres f. teres 0-1]
gi|311333292|gb|EFQ96474.1| hypothetical protein PTT_00922 [Pyrenophora teres f. teres 0-1]
Length = 561
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 111/243 (45%), Gaps = 53/243 (21%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+GN+ + K +K L K F +I+S+R RS + +
Sbjct: 235 KASRTVFLGNVSIECINSKAAEKALKKHLESFIPDLADNTPPHKIESIRFRST-AFGSSL 293
Query: 268 PRKGAILQKQINE-NADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K+I E S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 294 PKRAAFAKKEIMEATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPTK-- 351
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLESS----------V 367
D ++ VFVGNLPF V DE G +D+E V
Sbjct: 352 -------VDHRRCVFVGNLPF-VDDESQTPTVEGEKPKSKKPASDIEEGLWLQFAKCGKV 403
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQNCTPSK 424
E+VRV+R RVGKG AYV F EAA + +++ + R+LR++ C K
Sbjct: 404 ESVRVVRDAKTRVGKGFAYVQFVDENGVEAALQLNEQKFPPMLPRKLRITR----CKAEK 459
Query: 425 RKD 427
+KD
Sbjct: 460 KKD 462
>gi|189204099|ref|XP_001938385.1| nucleolar protein 12 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985484|gb|EDU50972.1| nucleolar protein 12 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 562
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 111/243 (45%), Gaps = 53/243 (21%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+GN+ + K +K L K F +I+S+R RS + +
Sbjct: 238 KASRTVFLGNVSIECINSKPAEKALKKHLESFIPDLADNTPPHKIESIRFRST-AFGSSL 296
Query: 268 PRKGAILQKQINE-NADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K+I E S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 297 PKRAAFAKKEIMEATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPTK-- 354
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLESS----------V 367
D ++ VFVGNLPF V DE G +D+E V
Sbjct: 355 -------VDHRRCVFVGNLPF-VDDESQTPTVEGDKPKSKKPASDIEEGLWVQFAKCGKV 406
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQNCTPSK 424
E+VRV+R RVGKG AYV F EAA + +++ + R+LR++ C K
Sbjct: 407 ESVRVVRDAKTRVGKGFAYVQFVDENGVEAALQLNEQKFPPMLPRKLRITR----CKAEK 462
Query: 425 RKD 427
+KD
Sbjct: 463 KKD 465
>gi|425771836|gb|EKV10269.1| Nucleolar protein 12 [Penicillium digitatum Pd1]
gi|425777183|gb|EKV15367.1| Nucleolar protein 12 [Penicillium digitatum PHI26]
Length = 526
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 56/210 (26%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFG----------EIDSVRIRSVPIIDTK-IPR 269
RT+F+GN+ K KKTL++ F +I+S+R RSV IP+
Sbjct: 196 RTVFLGNVSTEAIRSKTAKKTLLRHLTSFCSSLPESTGPHKIESIRFRSVAFASGGGIPK 255
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ + ++++ +E S +AY V+ + + +A A N ++ H+R+D P +
Sbjct: 256 RASFAKRELLDETTPSTNAYAVYTTLHAARKAPAALNGTIVLDRHLRVDSLAHPSE---- 311
Query: 328 EDAPLYDIKKTVFVGNLPF----------------------DVKDEEIYQLF---CGLND 362
D K+ VFVGNL F DV +E ++++F G D
Sbjct: 312 -----IDHKRCVFVGNLSFIDSETPEEDEKTGKKKKARAPADV-EEGLWRIFNAHTGGKD 365
Query: 363 ---LESSVEAVRVIRHPHMRVGKGIAYVLF 389
++ +VE VRVIR RVGKG AYV F
Sbjct: 366 KKAIKKNVEFVRVIRDSTTRVGKGFAYVQF 395
>gi|380492766|emb|CCF34363.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 50/235 (21%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFGE--------IDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K K+TL + + I+S+R RS+ +P+
Sbjct: 185 KASRTVFLSNVASDAIDSKSAKRTLEAHLVSVLDKDATPPQKIESIRFRSIAFSGGALPK 244
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + NE S +AY+VF + + A N ++ H+R+D P
Sbjct: 245 RAAYITKSLMNETTKSANAYVVFSTPAAARKVCAELNGTIVLDRHLRVDSVAHP------ 298
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLNDLES 365
AP D ++ VFVGNL F + DE I L+
Sbjct: 299 --APT-DHRRCVFVGNLGF-IDDETILTTNEEGETVQKKRTKVPADIEEGLWRTFGKHAG 354
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
VE VRV+R P RVGKG AYV F EAA L+ ++ + R +R++ A+
Sbjct: 355 KVENVRVVRDPKTRVGKGFAYVQFYDGNHVEAALLLDGKKYPPMLPRIMRVTRAK 409
>gi|83775425|dbj|BAE65545.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864245|gb|EIT73541.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 561
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 145/335 (43%), Gaps = 93/335 (27%)
Query: 164 TKKRKR---DDVEKDYVEKKYGVIAKEE---EGKKVGVGEKRKKADNETEDMLV------ 211
++KRKR +D+E+ Y+ + IAKEE E K+ KR+K + E ED
Sbjct: 138 SRKRKRAAGEDLEESYMRR----IAKEEQKEEQKRRAEKAKRQKGEGEEEDEATSTDKSD 193
Query: 212 ------------------HRKEEG---FDDEGKLLRTIFVGN-----LPLKVKKKTLIKE 245
H G D K RT+F+ N + K KKTL+K
Sbjct: 194 DENEDESSDEDEEVAIPKHETVTGDAQSSDIDKSNRTVFLSNVSNEAIKSKSAKKTLLKH 253
Query: 246 FIKF----------GEIDSVRIRSVPIIDT-KIPRKGAILQKQI-NENADSVHAYIVFKS 293
F F +++S+R RS KIP++ A ++++ +E S +AYIV+ +
Sbjct: 254 FESFLSTLPESTGPHKVESIRFRSTAFASGGKIPKRAAFAKREVLDETTPSTNAYIVYST 313
Query: 294 EQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF------ 346
Q+ +A +A N V+ H+R+D P AP+ D K+ VFVGNL F
Sbjct: 314 VQAARKAPVALNGTVVLDRHVRVDSVAHP--------APV-DNKRCVFVGNLNFVDQEGN 364
Query: 347 -------------DVKDEEIYQLFCGLND-------LESSVEAVRVIRHPHMRVGKGIAY 386
+E +++ F +VE+VRV+R RV KG AY
Sbjct: 365 ADDEEKPKKKKAPADVEEGLWRTFNAHTSKPKDQATRRGNVESVRVVRDSVTRVSKGFAY 424
Query: 387 VLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQ 418
V F + E A L+ ++ L R+LR+ A++
Sbjct: 425 VQFYDQNCVEEALLLNGKQFPPLLPRKLRVMRAKK 459
>gi|315046214|ref|XP_003172482.1| nucleolar protein 12 [Arthroderma gypseum CBS 118893]
gi|311342868|gb|EFR02071.1| nucleolar protein 12 [Arthroderma gypseum CBS 118893]
Length = 540
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 63/244 (25%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEIDSVRIRSVPIIDTKI 267
RT+F+ N+ K KKTL+ +I+S+R RS T +
Sbjct: 190 RTLFLSNVSTEAIKSKSAKKTLLNHLSSLLPKPSSTDTPSPIHKIESLRFRSTAFSSTAL 249
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
PR+ A +K++ + + Y+V+ + + + AL N ++ HIR+D P
Sbjct: 250 PRRAAYAKKELMDSTTKGTNVYVVYSTVLAAKKALKLNGTMVLDRHIRVDSVSKP----- 304
Query: 327 GEDAPLYDIKKTVFVGNLPF--------------DVK------------DEEIYQLF--- 357
+P D + VFVGNL F +VK +E +++ F
Sbjct: 305 ---SPT-DHTRCVFVGNLGFVDEETQPAPDEGDGEVKKKAKKGSEAGDVEEGLWRTFNER 360
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLS 414
CG E VE+VRV+R RVGKG AYV FK EAA L+ ++ + R+LR++
Sbjct: 361 CGG---EGVVESVRVVRDRLTRVGKGFAYVQFKDENCVEAALLLDGKKFPPMLPRKLRVT 417
Query: 415 HAQQ 418
A++
Sbjct: 418 RAKK 421
>gi|156375625|ref|XP_001630180.1| predicted protein [Nematostella vectensis]
gi|156217196|gb|EDO38117.1| predicted protein [Nematostella vectensis]
Length = 962
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 80/145 (55%), Gaps = 30/145 (20%)
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+++ Y+V+K+ ++ A+A N I G HIR+D A + +D +++VF+GN
Sbjct: 727 TLNGYVVYKTAENANQAIASNGEEIDGFHIRVDLASNDKA---------HDHQRSVFIGN 777
Query: 344 LPF-------------DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
LPF ++++E + +LF CG +VE+VR+IR +GKG YVL
Sbjct: 778 LPFVLIQNPKSFVFVPNIEEEPLRELFTTCG------NVESVRLIRDRKTGIGKGFGYVL 831
Query: 389 FKTREAANLVIKRRNLKLRDRELRL 413
F++++A +K N + + R++R+
Sbjct: 832 FESKDAVVFALKMNNAEFKGRKIRV 856
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 267 IPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
+ RK + +K+ + +++ Y+V+K+ ++ A+A N I G HIR+D A
Sbjct: 531 LSRKVGMKRKEFHSERHTLNGYVVYKAAENANQAIASNGEEIDGFHIRVDLAS------- 583
Query: 327 GEDAPLYDIKKTVFVGNLPF 346
+ +D +++VF+GNLPF
Sbjct: 584 --NDKAHDHQRSVFIGNLPF 601
>gi|429860604|gb|ELA35334.1| nucleolar protein 12 [Colletotrichum gloeosporioides Nara gc5]
Length = 540
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 50/239 (20%)
Query: 219 DDEGKLLRTIFVGNLPL-----KVKKKTL--------IKEFIKFGEIDSVRIRSVPIIDT 265
D+ K RT+F+ N+ K K+TL K+ +I+S+R RSV
Sbjct: 175 DEIDKANRTVFLSNVASEAVSNKAAKRTLEAHLTSVLDKDATPAQKIESIRFRSVAFSGG 234
Query: 266 KIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRK 323
+P++ A + K + E S +AY+VF + + +A N V+ H+R+D P
Sbjct: 235 ALPKRAAYITKAVMQETTKSANAYVVFSTPAAARKVVAELNGTVVLERHLRVDSVAHP-- 292
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLN 361
+P D ++ VFVGNL F V DE I L+
Sbjct: 293 ------SPT-DHRRCVFVGNLGF-VDDETITTVDEAGETVQRKRTKVPADIEEGLWRTFG 344
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
VE VRVIR P RVGKG AYV F EAA L+ ++ + R +R++ A+
Sbjct: 345 KQAGKVENVRVIRDPKTRVGKGFAYVQFYDANHVEAALLLDGKKYPPMLPRIMRVTRAK 403
>gi|367052169|ref|XP_003656463.1| hypothetical protein THITE_2121111 [Thielavia terrestris NRRL 8126]
gi|347003728|gb|AEO70127.1| hypothetical protein THITE_2121111 [Thielavia terrestris NRRL 8126]
Length = 609
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 65/322 (20%)
Query: 165 KKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNET---EDMLVHRKEEGFDDE 221
K+RK D EK + G +++E + +++ E+ + + E E + E +
Sbjct: 166 KRRKADATEKTAAAEDAGGVSREGDDERMAGMEEDESSVGEVPVHESLTTGPVETELE-- 223
Query: 222 GKLLRTIFVGNLPLKV-----KKKTLIKEFIKFGE--------IDSVRIRSVPIIDTKIP 268
K RT+F+ N+ ++ KK L+ + + S+R RS+ T IP
Sbjct: 224 -KANRTVFLSNVSIEAITSRKAKKILLHHLSSVLDKKADPPQKVQSIRFRSIAFATTGIP 282
Query: 269 RKGAILQKQINE-NADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLK 326
++ A ++K + E S +AY+V+ + + A+A N V+ H+R+D P
Sbjct: 283 KRVAYIKKSLLEATTKSTNAYVVYSTAAAARLAVAQLNGTVVLDRHLRVDSVAHP----- 337
Query: 327 GEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--------------------------LFCGL 360
AP+ D ++ VFVGNL F V DE +Y L+
Sbjct: 338 ---APV-DHRRCVFVGNLGF-VDDETVYSTKIDKEGKEITEKRKRTKTPMDVEEGLWRVF 392
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELRLS--- 414
+ VE+VRV+R RVGKG AYV F E+A L+ ++ + RELR+S
Sbjct: 393 GEEAGKVESVRVVRDAATRVGKGFAYVQFYDGNAVESAILLNGKKFPPMLPRELRVSRCK 452
Query: 415 --HAQQNCTPSKRKDVAPAVNS 434
H ++R+ +A + +S
Sbjct: 453 APHKTARAMEARREKIASSASS 474
>gi|71653118|ref|XP_815201.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70880241|gb|EAN93350.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 421
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 31/254 (12%)
Query: 191 KKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFG 250
+++GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G
Sbjct: 96 EELGVGKAAEKRGIKSNKHLRHALHENKEEES---RTVFVGNLVNDVKRRIVEKIFNNCG 152
Query: 251 EIDSVRIRSVPIIDT------------KIPRKGAILQKQINENAD-SVHAYIVFKSEQST 297
I+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 153 AIECVRIRAQALEGGGEEGRRNENRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSV 212
Query: 298 EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF 357
AL N V+ G HI + ++ Y + +VF+GN+ +D +E ++ F
Sbjct: 213 TKALEMNGVVVDGRHIVVTTMDAESRE--------YAPETSVFIGNIAYDTNEEMVWNFF 264
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
L + V VR++R KG YV F++ + + I R L RE+R+ H Q
Sbjct: 265 --LEKGVTDVRRVRLVRDRETGSCKGFGYVEFRSPASVSRAIAVRGSHLNGREMRIVHVQ 322
Query: 418 QN-----CTPSKRK 426
++ PS+R+
Sbjct: 323 KSRAVSATKPSRRE 336
>gi|452001527|gb|EMD93986.1| hypothetical protein COCHEDRAFT_1201816 [Cochliobolus
heterostrophus C5]
Length = 560
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 53/243 (21%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K +KTL K F +I+S+R RS + +
Sbjct: 235 KAARTVFLSNVSTECINSKSAEKTLKKHLESFIADLADNNPPHKIESIRFRST-AFGSSL 293
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K I + S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 294 PKRAAFAKKDIMDATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPAK-- 351
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLE----------SSV 367
D ++ VFVGNLPF V DE + G +D+E ++
Sbjct: 352 -------VDHRRCVFVGNLPF-VDDESQMPVAEGEKPKKNKPSSDVEEGLWVHLSKCGTI 403
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTREA--ANLVIKRRNL-KLRDRELRLSHAQQNCTPSK 424
E+VRV+R RVGKG AYV F A L + +N + R+LR++ C K
Sbjct: 404 ESVRVVRDAKTRVGKGFAYVQFTDENGVEAALQLNEKNFPPMLPRKLRITR----CKAEK 459
Query: 425 RKD 427
+KD
Sbjct: 460 KKD 462
>gi|302506797|ref|XP_003015355.1| RNA binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178927|gb|EFE34715.1| RNA binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 552
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 58/244 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG---------------EIDSVRIRSVPI 262
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 195 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSPTTPSTTHKIESLRFRSTAF 254
Query: 263 IDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
T +PR+ A +K++ + +AY+V+ + + + AL N ++ HIR+D P
Sbjct: 255 SSTALPRRAAYAKKELMDSTTKGTNAYVVYSTALAAKKALKLNGTIVLDRHIRVDSVSKP 314
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQLF 357
AP+ D + VFVGNL F DV +E +++ F
Sbjct: 315 --------APV-DHTRCVFVGNLGFVDEEAQPADQDGEVKKKKKAAAAADV-EEGLWRTF 364
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLS 414
E VE+VRV+R RVGKG AYV FK EAA L ++ + R+LR++
Sbjct: 365 NDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFKDENCVEAALLCDGKKFPPMLPRKLRVT 424
Query: 415 HAQQ 418
A++
Sbjct: 425 RAKR 428
>gi|154308958|ref|XP_001553814.1| hypothetical protein BC1G_08007 [Botryotinia fuckeliana B05.10]
gi|347838569|emb|CCD53141.1| hypothetical protein [Botryotinia fuckeliana]
Length = 614
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 107/251 (42%), Gaps = 58/251 (23%)
Query: 223 KLLRTIFVGN-----LPLKVKKKTLIKEFIKF-------------GEIDSVRIRSVPIID 264
K RTIF+GN + K KK L+ F +++S+R RS
Sbjct: 253 KASRTIFLGNVASSTISSKADKKILMSHLSSFIDDLPPPPAGKPSHKLESLRFRSTAYAT 312
Query: 265 TKIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPR 322
+P+K A +K I S +AY V+ + + EA N ++ H+R+D P
Sbjct: 313 AALPKKAAFAKKDIMTATTKSTNAYAVYSTAFAAREAVKKLNGTIVLDRHLRVDGVAHPA 372
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------DLESS------- 366
K D ++ VFVGNL F V DE + + G N D+E
Sbjct: 373 K---------TDHRRCVFVGNLGF-VDDESLLEQ-DGENSRKRSKIPSDIEEGLWRQFGK 421
Query: 367 ---VEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRL-----SH 415
VE+VRVIR RVGKG AYV F EAA L +++ + R LR+ H
Sbjct: 422 AGEVESVRVIRDEKTRVGKGFAYVQFTDANAVEAALLFNEKKYPPMLPRVLRVVRAKAQH 481
Query: 416 AQQNCTPSKRK 426
Q + P+ R+
Sbjct: 482 KQVSSRPTARQ 492
>gi|326477104|gb|EGE01114.1| nucleolar protein 12 [Trichophyton equinum CBS 127.97]
Length = 516
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 59/250 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------------GEIDSVRIRSVP 261
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 157 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPTSSSSTTTPSTTHKIESLRFRSTA 216
Query: 262 IIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
T +PR+ A +K + + +AY+V+ + + + AL N ++ HIR+D
Sbjct: 217 FSSTAVPRRAAYAKKDLMDSTTKGTNAYVVYSTALAAKKALKLNGTMVLDRHIRVDSVSK 276
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQL 356
P AP+ D + VFVGNL F DV +E +++
Sbjct: 277 P--------APV-DHTRCVFVGNLGFVDEETQPAEQDGEVKKKKKAAAAADV-EEGLWRT 326
Query: 357 FCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRL 413
F E VE+VRV+R RVGKG AYV FK EAA L ++ + R+LR+
Sbjct: 327 FNDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFKDEDCVEAALLCDGKKFPPMLPRKLRV 386
Query: 414 SHAQQNCTPS 423
+ A++ T S
Sbjct: 387 TRAKRIGTGS 396
>gi|326472030|gb|EGD96039.1| nucleolar protein 12 [Trichophyton tonsurans CBS 112818]
Length = 553
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 110/250 (44%), Gaps = 59/250 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG----------------EIDSVRIRSVP 261
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 194 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSSTTTPSTTHKIESLRFRSTA 253
Query: 262 IIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP 320
T +PR+ A +K + + +AY+V+ + + + AL N ++ HIR+D
Sbjct: 254 FSSTAVPRRAAYAKKDLMDSTTKGTNAYVVYSTALAAKKALKLNGTMVLDRHIRVDSVSK 313
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQL 356
P AP+ D + VFVGNL F DV +E +++
Sbjct: 314 P--------APV-DHTRCVFVGNLGFVDEETQPAEQDGEVKKKKKAAAAADV-EEGLWRT 363
Query: 357 FCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRL 413
F E VE+VRV+R RVGKG AYV FK EAA L ++ + R+LR+
Sbjct: 364 FNDQCGGEGVVESVRVVRDRLTRVGKGFAYVQFKDENCVEAALLCDGKKFPPMLPRKLRV 423
Query: 414 SHAQQNCTPS 423
+ A++ T S
Sbjct: 424 TRAKRIGTGS 433
>gi|406859534|gb|EKD12598.1| nucleolar protein 12 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 593
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 107/236 (45%), Gaps = 52/236 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF------------GEIDSVRIRSVPIIDT 265
K RT+F+ N+ K KKTL+ F +I+S+R RS T
Sbjct: 234 KASRTVFLANVSTLAMTDKAAKKTLLGHMGSFLSSLAPLAGKPEHKIESLRFRSTAYAGT 293
Query: 266 KIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRK 323
+P+K A +K + S +AY+V+ + + EA N ++ H+R+D P K
Sbjct: 294 ALPKKAAFAKKDLMAATTKSTNAYVVYSTAFAAREAVKKLNGTMVLDRHLRVDGVAHPAK 353
Query: 324 KLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN---------DLE---------- 364
D ++ VFVGNL F V DE + + G N D+E
Sbjct: 354 T---------DHRRCVFVGNLGF-VDDESMMEQ-GGDNERKRSKIPSDIEEGLWRQFGKV 402
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFK---TREAANLVIKRRNLKLRDRELRLSHAQ 417
+VE+VRV+R RVGKG AYV F+ + EAA L +++ + R LR+ A+
Sbjct: 403 GTVESVRVVRDEKTRVGKGFAYVQFEDANSVEAALLFNEKKYPPMLPRVLRVVRAK 458
>gi|407408078|gb|EKF31640.1| RNA binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 381
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 37/255 (14%)
Query: 193 VGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+GVG+ +K ++ L H E ++E RT+FVGNL VK++ + K F G I
Sbjct: 98 LGVGKAAEKKGIKSNKHLRHALHENREEES---RTVFVGNLVNDVKRRVVEKVFKNCGAI 154
Query: 253 DSVRIRSVPIIDT------------KIPRKGAILQKQINENAD-SVHAYIVFKSEQSTEA 299
+ VRIR+ + + R +L+ +I + S AY++FK E S
Sbjct: 155 ECVRIRAQALEGGGEESRGNEKRHKSVGRAIRVLRGEIKKGDQYSAVAYVLFKDEGSVTK 214
Query: 300 ALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
AL N V+ G HI + D+ Y + +VF+GN+ +D +E ++ F
Sbjct: 215 ALEMNGVVVDGRHIVVT--------TMDADSREYAPETSVFIGNIAYDTNEEMVWNFF-- 264
Query: 360 LNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
+E V VR +R R KG YV F++ + + I R RE+R+ H
Sbjct: 265 ---VEKGVTDVRRVRLVRDRDTGSCKGFGYVEFRSPASVSRAIAVRGSLFNGREMRIVHV 321
Query: 417 QQN-----CTPSKRK 426
Q++ PS+R+
Sbjct: 322 QKSRAVSATKPSRRE 336
>gi|327305109|ref|XP_003237246.1| nucleolar protein 12 [Trichophyton rubrum CBS 118892]
gi|326460244|gb|EGD85697.1| nucleolar protein 12 [Trichophyton rubrum CBS 118892]
Length = 538
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 58/244 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKFG---------------EIDSVRIRSVPI 262
K RT+F+ N+ K KKTL+K +I+S+R RS
Sbjct: 182 KASRTLFLSNVSTEAIKSKSAKKTLLKHLSSLLPKPSSSSTTTLSTTHKIESLRFRSTAF 241
Query: 263 IDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP 321
T +PR+ A +K++ + +AY+V+ + + + AL N ++ HIR+D P
Sbjct: 242 SSTALPRRAAYAKKELMDSTTKGTNAYVVYSTALAAKKALKLNGTMVLDRHIRVDSVSKP 301
Query: 322 RKKLKGEDAPLYDIKKTVFVGNLPF------------------------DVKDEEIYQLF 357
AP+ D + VFVGNL F DV +E +++ F
Sbjct: 302 --------APV-DHTRCVFVGNLGFVDEETQPAEQDGEVKKKKKAAAAADV-EEGLWRTF 351
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLS 414
E VE+VRV+R RVGKG AYV FK EAA L ++ + R+LR++
Sbjct: 352 NDHCGGEGVVESVRVVRDRLTRVGKGFAYVQFKDENCVEAALLCDGKKFPPMLPRKLRVT 411
Query: 415 HAQQ 418
A++
Sbjct: 412 RAKR 415
>gi|154283501|ref|XP_001542546.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410726|gb|EDN06114.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 641
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 114/277 (41%), Gaps = 91/277 (32%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RTIF+ N+ K KKTL+K F +I+S+R RS +
Sbjct: 225 KSARTIFLSNVSTEAIKSKSAKKTLLKHLCSFFPSLPESATPHKIESIRFRSTAFSTQSM 284
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKL 325
P++ A ++++ + S +AY+V+ + + A A N +VI H+R+D P
Sbjct: 285 PKRAAYAKRELMDSTTRSTNAYVVYSTTAAARGAPKALNGSVILDRHLRVDSVAHP---- 340
Query: 326 KGEDAPLYDIKKTVFVGNL----------------------------PFDVKDEEIYQLF 357
AP+ D K+ VFVGNL P DV +E +++ F
Sbjct: 341 ----API-DYKRCVFVGNLGFVDEETPTDEQVAGQQKEKKRKQKHAPPADV-EEGLWRTF 394
Query: 358 ----------------CGLNDLESS-----------------VEAVRVIRHPHMRVGKGI 384
G + SS VE+VRVIR P R+GKG+
Sbjct: 395 NEHTRASIAKPSKPTAAGKSADPSSNKISKDTGPYPDLGGGPVESVRVIRDPATRIGKGV 454
Query: 385 AYVLFKTREAANLVIKRRNLK---LRDRELRLSHAQQ 418
AYV F+ A + + K L R+LR++ A++
Sbjct: 455 AYVQFRDENAVEMALLLSGQKFPPLLPRKLRVTRAKR 491
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 106/242 (43%), Gaps = 61/242 (25%)
Query: 162 KKTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK------------------ 200
+K +KRKR +D+E+ Y+ + AKE+E ++ +++K
Sbjct: 131 EKRRKRKRGGAEDIEESYMRRIAKEEAKEDEKRRSEKAKRQKIVESVGRESDSSDSESDN 190
Query: 201 -KADNETED--------MLVHRKEEGFDDEGKL---LRTIFVGNLPL-----KVKKKTLI 243
+ ++ T D +VH D L RTIF+ N+ K KKTL+
Sbjct: 191 EEGEDGTSDNVDGIDNPPIVHESNSSKPDAALLDKSARTIFLSNVSTEAIKSKSAKKTLL 250
Query: 244 KEFIKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFK 292
K F +I+S+R RS +P++ A ++++ + S +AY+V+
Sbjct: 251 KHLCSFFPSLPESATPHKIESIRFRSTAFSTQSMPKRAAYAKRELMDSTTRSTNAYVVYS 310
Query: 293 SEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDE 351
+ + A A N +VI H+R+D P AP+ D K+ VFVGNL F DE
Sbjct: 311 TTAAARGAPKALNGSVILDRHLRVDSVAHP--------API-DYKRCVFVGNLGF--VDE 359
Query: 352 EI 353
E
Sbjct: 360 ET 361
>gi|310793454|gb|EFQ28915.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 570
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 101/232 (43%), Gaps = 50/232 (21%)
Query: 226 RTIFVGNLPL-----KVKKKTL--------IKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
RT+F+ N+ K K+TL K+ +I+S+R RSV +P++ A
Sbjct: 203 RTVFLSNVAADAIDNKSAKRTLEAHLSSVLDKDATPPQKIESIRFRSVAFSGGGLPKRAA 262
Query: 273 ILQKQI-NENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+ K + E S +AY+VF + + A N V+ H+R+D P A
Sbjct: 263 YITKSLMKETTKSANAYVVFSTPAAARKVCAELNGTVVLDRHLRVDSVAHP--------A 314
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQ----------------------LFCGLNDLESSVE 368
P D ++ VFVGNL F + DE I L+ VE
Sbjct: 315 PT-DHRRCVFVGNLGF-IDDETIVSTNDEGETVQKKRTKVPADIEEGLWRTFGKHAGKVE 372
Query: 369 AVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQ 417
VRV+R P RVGKG AYV F EAA L+ ++ + R LR++ A+
Sbjct: 373 NVRVVRDPKTRVGKGFAYVQFYDGIHVEAALLLDGKKFPPMLPRILRVTRAK 424
>gi|400599227|gb|EJP66931.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 561
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 91/211 (43%), Gaps = 62/211 (29%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKFGE--------IDSVRIRSVPIIDTKIPRKGA 272
RT+FV N+ K K+ L+ F + ++S+R RSV +P++ A
Sbjct: 188 RTVFVSNVSSEAVSSKAAKRQLLAHFATVLDKDASPSQKVESIRFRSVAFSGGSMPKRAA 247
Query: 273 ILQKQINE-NADSVHAYIVFKSEQSTEAAL-----AFNMAVIGGNHIRLDRACPPRKKLK 326
+ K + E S +AYIVF ST AA N + + G HIR+D P
Sbjct: 248 YITKSVMEATTHSTNAYIVF----STTAAARRVCKELNGSEVLGRHIRVDSVAHP----- 298
Query: 327 GEDAPLYDIKKTVFVGNL-------------------------PFDVKDEEIYQLFCGLN 361
+P D ++ +FVGNL P DV +E +++ F +
Sbjct: 299 ---SPT-DHRRCIFVGNLGFVDDETMLNTNKDGEAESKKRNKVPSDV-EEGLWRTFSKIG 353
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
VE VRV+R P RVGKG AYV F R
Sbjct: 354 ----KVENVRVVRDPKTRVGKGFAYVQFYVR 380
>gi|378733246|gb|EHY59705.1| hypothetical protein HMPREF1120_07688 [Exophiala dermatitidis
NIH/UT8656]
Length = 392
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 84/329 (25%)
Query: 226 RTIFVGN-----LPLKVKKKTLIKEF----------IKFGEIDSVRIRSVPIIDTKIPRK 270
RT+F+GN + LK KK L + + G+++S+R RS P+K
Sbjct: 85 RTVFLGNVSTDAIKLKRAKKILSRHLRSALKTPAQGPRLGKLESLRFRSTAYHSDAGPKK 144
Query: 271 GAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
+K++ +E S +AY VF +E++ A N +V+ H+R+D P +
Sbjct: 145 ATFAKKELMDETTPSTNAYAVFTTEEAAKHVAKKLNGSVVLDRHLRVDYMGKPAE----- 199
Query: 329 DAPLYDIKKTVFVGNLPFDVKD------------------------EEIYQLFCGLNDLE 364
D ++ +FVGNL F K+ E +++ F +
Sbjct: 200 ----IDHRRCIFVGNLSFVSKETAGNDEDDEAKRRRAAAKEPADPEEGLWRTFSKVG--- 252
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQNCT 421
VE+VRV+R RV KGIAYV F++ E A L+ ++ + R+LR+ A++
Sbjct: 253 -KVESVRVVRDQETRVSKGIAYVQFESENSVEGALLMNDKKFPPMLPRKLRVMRARR--M 309
Query: 422 PSKRKDVAPAVNSPPKKFVLDSRTLGSG-NRSNS----KVAMSYQGLQASKSCTQKKVHS 476
PSK K P S SR G+G +R +S K ++G +AS S
Sbjct: 310 PSKSK--PPTAGS-------KSRFPGAGRDRRSSGPDRKAGFVFEGHRAS---------S 351
Query: 477 GSSGVVKMKKSRTQKGERPKVQPEKRPAV 505
S G K R +K RP + +R A
Sbjct: 352 TSKGTTGGHKKRHKK--RPTTRSSRRGAA 378
>gi|226290935|gb|EEH46363.1| nucleolar protein [Paracoccidioides brasiliensis Pb18]
Length = 611
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 75/262 (28%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K KK L+K F +I+S+R RS +
Sbjct: 223 KTARTVFLSNVSTEAIKSKTAKKALLKHLSSFFPSLPDSTTPHKIESIRFRSTAFSTNAM 282
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A ++++ + S +AY+V+ + + A A N + + H+R+D P
Sbjct: 283 PKRAAYAKRELMDSTTRSTNAYVVYTTTAAARRAPKALNGSFVLDRHLRVDSVAHP---- 338
Query: 326 KGEDAPLYDIKKTVFVGNLPF----DVKDEEIYQ---------------LFCGLNDLESS 366
+P+ D K+ +FVGNL F DE++ Q L+ N+ S
Sbjct: 339 ----SPI-DYKRCIFVGNLGFVDEETPTDEKVEQQTKKKNTQPADVEEGLWRTFNEHTRS 393
Query: 367 ---------------------------VEAVRVIRHPHMRVGKGIAYVLFKTR---EAAN 396
VE+VRVIR P R+GKGIAYV F EAA
Sbjct: 394 AIAKLSKSPAKSKGSDASNTNNPAIGTVESVRVIRDPATRIGKGIAYVQFHDENAVEAAL 453
Query: 397 LVIKRRNLKLRDRELRLSHAQQ 418
L+ ++ + R+LR++ A++
Sbjct: 454 LLDGQKFPPMLPRKLRVTRAKR 475
>gi|451849708|gb|EMD63011.1| hypothetical protein COCSADRAFT_119937 [Cochliobolus sativus
ND90Pr]
Length = 555
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 53/243 (21%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K +KTL K F +I+S+R RS + +
Sbjct: 230 KAARTVFLSNVSTECINSKSAEKTLKKHLESFIADLADNNPPHKIESIRFRST-AFGSSL 288
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K I + S +AY V+ ++ + EA N +V+ H+ +D P K
Sbjct: 289 PKRAAFAKKDIMDATTKSTNAYAVYTTKVAAREAVKRLNGSVLLNRHLHVDSVAHPAK-- 346
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG--------LNDLE----------SSV 367
D ++ VFVGNLPF V DE + G +D+E ++
Sbjct: 347 -------VDHRRCVFVGNLPF-VDDESQMPVAEGEKPKKNKPSSDVEEGLWVHLSKCGTI 398
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTREA--ANLVIKRRNL-KLRDRELRLSHAQQNCTPSK 424
E+VRV+R RVGKG AYV F A L + +N + R+LR++ C K
Sbjct: 399 ESVRVVRDAKTRVGKGFAYVQFIDENGVEAALQLNEKNFPPMLPRKLRITR----CKAEK 454
Query: 425 RKD 427
+KD
Sbjct: 455 KKD 457
>gi|340056502|emb|CCC50835.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 429
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 32/229 (13%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
VH + ++E + RT+FVGNL +K++ + K F G I+SVRIR+ + K
Sbjct: 111 VHLRHSLQENEEENCRTVFVGNLVNCIKRRVVEKVFKDCGPIESVRIRAQALETVGARAK 170
Query: 271 GA------ILQKQINENAD------------SVHAYIVFKSEQSTEAALAFNMAVIGGNH 312
G ++ K + S AY++FKS S AL N V+ G H
Sbjct: 171 GGDDSGKKVVPKHVGRAIRVLRGDLKTGEQYSAVAYVLFKSASSVPEALKHNGVVVEGRH 230
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC--GLNDLESSVEAV 370
I + ++ K E +VF+GN+ + +E + F GL+D V V
Sbjct: 231 IVVTAMDMESREYKPE--------LSVFIGNIDYGTNEESVRNFFVEKGLDD----VRRV 278
Query: 371 RVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQN 419
R+IR V KG YV F + + + R RE+R+ Q++
Sbjct: 279 RLIRDRETGVCKGFGYVEFGSSSSVPKAVGLRGSIFSGREIRIVRTQKS 327
>gi|225679223|gb|EEH17507.1| nucleolar protein [Paracoccidioides brasiliensis Pb03]
Length = 611
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 75/262 (28%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K KK L+K F +I+S+R RS +
Sbjct: 223 KTARTVFLSNVSTEAIKSKTAKKALLKHLSSFFPSLPDSTTPHKIESIRFRSTAFSTNAM 282
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A ++++ + S +AY+V+ + + A A N + + H+R+D P
Sbjct: 283 PKRAAYAKRELMDSTTRSTNAYVVYTTTAAARRAPKALNGSFVLDRHLRVDSVAHP---- 338
Query: 326 KGEDAPLYDIKKTVFVGNLPF----DVKDEEIYQ---------------LFCGLNDLESS 366
+P+ D K+ +FVGNL F DE++ Q L+ N+ S
Sbjct: 339 ----SPI-DYKRCIFVGNLGFVDEETPTDEKVEQQTKKKNTQPADVEEGLWRTFNEHTRS 393
Query: 367 ---------------------------VEAVRVIRHPHMRVGKGIAYVLFKTR---EAAN 396
VE+VRVIR P R+GKGIAYV F EAA
Sbjct: 394 AIAKLSKSPAKSKGSDASNTNNPAIGTVESVRVIRDPATRIGKGIAYVQFHDENAVEAAL 453
Query: 397 LVIKRRNLKLRDRELRLSHAQQ 418
L+ ++ + R+LR++ A++
Sbjct: 454 LLDGQKFPPMLPRKLRVTRAKR 475
>gi|84997495|ref|XP_953469.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304465|emb|CAI76844.1| hypothetical protein, conserved [Theileria annulata]
Length = 346
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 225 LRTIFVGNLPLKVKKKT-LIKEF-IKFGEIDSVRIRSVPIIDTKIPR--KGAILQKQINE 280
L +F+GN+PL +K K+ L+K+ I I SV RS+PI D K R K +++++ ++
Sbjct: 105 LGFVFIGNVPLTIKDKSDLVKKLKINPKIIQSVHFRSLPI-DPKYARNKKVGVIKEKFSD 163
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
D+ +AYI + L N + G+H+ ++ + + + KKTVF
Sbjct: 164 AKDNQNAYIKLSDPKYLNELLEKNTLEVDGHHLFINTS-------DKDSFSKFSRKKTVF 216
Query: 341 VGNLPFDVKDEEIYQLFCGLNDL------ESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
VG LP ++++Y +F ++ + E AVR++R P KG +V F R A
Sbjct: 217 VGRLPPTATEDDLYNIFMNISPVKGKQSNEFKFSAVRIVRDPVTMKSKGFGFVEFDNRPA 276
Query: 395 ANLVIKRRN 403
IK N
Sbjct: 277 VTEAIKELN 285
>gi|322699077|gb|EFY90842.1| nucleolar protein 12 [Metarhizium acridum CQMa 102]
Length = 548
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 46/203 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEF--------IKFGEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K KK L+ + +++S+R RSV +P+
Sbjct: 203 KASRTVFLANVSTEAISSKAAKKALLTHLSSVLDPQGMPAQKLESIRFRSVAFSTGSMPK 262
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + S +AY VF + + A N I G HIR+D P
Sbjct: 263 RAAYITKSLMGATTKSANAYAVFSTPAAARLVASKLNGTEILGRHIRVDSVAHP------ 316
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE---------------------SS 366
+P D ++ +FVGNL F V DE + G ++E
Sbjct: 317 --SPT-DHRRCIFVGNLGF-VDDETVVNTNEGGENVEKKRTKVPSDIEEGLWRTFSKTGK 372
Query: 367 VEAVRVIRHPHMRVGKGIAYVLF 389
VE VRV+R P RVGKG AYV F
Sbjct: 373 VENVRVVRDPKTRVGKGFAYVQF 395
>gi|358372752|dbj|GAA89354.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 519
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 60/257 (23%)
Query: 212 HRKEEGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEFIKF----------GEI 252
H + G D E K L RT+F+GN + K KKTL+K F ++
Sbjct: 173 HESQTG-DAESKELDKSNRTVFLGNVSSEAIKSKSAKKTLLKHLGSFLSTLPESTGPHKV 231
Query: 253 DSVRIRSVPIIDTK-IPRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIG 309
+S+R RS +P++ + ++++ ++ +AY V+ + Q+ +A A N VI
Sbjct: 232 ESIRFRSTAFASGGGVPKRASFAKQEVLDDTTPCTNAYAVYSTVQAARKAPAALNGTVIL 291
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF---DVK---------------DE 351
H+R+D P AP+ D K+ VFVGNL F +VK +E
Sbjct: 292 DRHLRVDSVAHP--------API-DHKRCVFVGNLDFVDNEVKPDDEQKKKKRAPADVEE 342
Query: 352 EIYQLF---CGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKR 401
+++ F G ++ + +VE+VRV+R RVGKG AYV F + E A ++ +
Sbjct: 343 GLWRTFNAHTGRSNKDKPKNGNVESVRVVRDSLTRVGKGFAYVQFYDQNCVEEALVLNGK 402
Query: 402 RNLKLRDRELRLSHAQQ 418
+ R+LR+S A++
Sbjct: 403 HYPPMLPRKLRVSRAKK 419
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 34/199 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVGNL V ++ L F G ++S RI I D + R KG
Sbjct: 184 TVFVGNLSWNVDEEMLAATFADCGTVESARI----ITDKETGRAKG-------------- 225
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPR--KKLKGEDAPLYDIKKTVFV 341
Y+ F+S + AA+A + G IR+D + PPR + ++AP T+F+
Sbjct: 226 FGYVTFESADALTAAMALTGTELDGREIRVDVSTPKPPRDGNRQGRKEAPQSAPTTTLFL 285
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR---VGKGIAYVLFKTREAANLV 398
GNL F+V ++EI + F L S +R P R KG YV + E A
Sbjct: 286 GNLSFNVTEDEIRESFSQYGQLVS-------VRFPTDRDTGAFKGFGYVEYGDVETAQKA 338
Query: 399 IKRRN-LKLRDRELRLSHA 416
++ N +++ R LRL +A
Sbjct: 339 VEGLNGVEIAGRSLRLDYA 357
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P KK K E+ + TVFVGNL ++V +E + F CG +VE+ R+I
Sbjct: 171 PTKKPKTEEP----VNSTVFVGNLSWNVDEEMLAATFADCG------TVESARIITDKET 220
Query: 379 RVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
KG YV F++ +A + +L RE+R+
Sbjct: 221 GRAKGFGYVTFESADALTAAMALTGTELDGREIRV 255
>gi|323454063|gb|EGB09934.1| hypothetical protein AURANDRAFT_71254 [Aureococcus anophagefferens]
Length = 446
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 41/198 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-------AILQKQI 278
RT+FVGN+P + KK L F FG + +VR RS+P K+ G QK +
Sbjct: 119 RTVFVGNVPTEATKKQLRTFFKTFGAVATVRTRSLPTAGVKVDDAGNDALVKRVCAQKHL 178
Query: 279 NENAD-SVHAYIVFKSEQSTEAALAFNMAVIGGN----------------------HIRL 315
+A ++HAY+VF++ + A + H+R+
Sbjct: 179 LSDAKRTMHAYVVFETADAAAEAARAANGAVWPGPAAGAAGAEAAAYVAGEAPEVFHLRV 238
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG-LNDL--ESSVEAVRV 372
D A R +DA L +T FVGN P D+ +E + LF L +L +++ VRV
Sbjct: 239 DLASGARD----DDAHL----RTAFVGNAPRDLTEEGLRSLFAAHLAELGGHGAIDNVRV 290
Query: 373 IRHPHMRVGKGIAYVLFK 390
+R + G+AYV+ +
Sbjct: 291 VRRKEDHLCIGVAYVMLR 308
>gi|260830184|ref|XP_002610041.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
gi|229295404|gb|EEN66051.1| hypothetical protein BRAFLDRAFT_129224 [Branchiostoma floridae]
Length = 542
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
++D K ++FVGNLPFDV+D+ +Y+ F CG VE VR+IR +GKG YVLF
Sbjct: 383 IFDHKLSIFVGNLPFDVEDDSVYEHFSQCG------EVEGVRIIRDSKSGLGKGFGYVLF 436
Query: 390 KTREAANLVIKRRNLKLRDRELRLSHA 416
+ + L I+ R++R+ A
Sbjct: 437 QDSASVGLAIRLNEKTFSGRKIRVKRA 463
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L K F KFGEI+SVR RS I D K+ L + +++
Sbjct: 349 RTVFVGNLPVSTTKKELKKMFRKFGEIESVRFRS--IFDHKLSIFVGNLPFDVEDDSVYE 406
Query: 286 H------------------------AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
H Y++F+ S A+ N G IR+ RA
Sbjct: 407 HFSQCGEVEGVRIIRDSKSGLGKGFGYVLFQDSASVGLAIRLNEKTFSGRKIRVKRAV 464
>gi|169623947|ref|XP_001805380.1| hypothetical protein SNOG_15221 [Phaeosphaeria nodorum SN15]
gi|160705083|gb|EAT77446.2| hypothetical protein SNOG_15221 [Phaeosphaeria nodorum SN15]
Length = 504
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 49/200 (24%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKIPRK 270
RT+F+GN+ K +K L K F +++S+R RS+ + T P++
Sbjct: 188 RTVFLGNVSSECINSKSTEKALKKHLESFIADLADNNPPHKVESIRYRSIRLSITACPKR 247
Query: 271 GAILQKQINENAD-SVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
A +K+I ++ S +AY V+ + + EA N +V H+ +D P K
Sbjct: 248 AAFAKKEIKDSTTRSTNAYAVYTTTTAAREAVKRLNGSVFLKRHMHVDSVAHPTK----- 302
Query: 329 DAPLYDIKKTVFVGNLPF------------DVK-------DEEIYQLFCGLNDLESSVEA 369
D ++ VFVGNLPF +VK +E ++ F +ES
Sbjct: 303 ----IDHRRCVFVGNLPFVDDRSQVPTAEGEVKKKPSSDVEEGLWTHFASAGKIES---- 354
Query: 370 VRVIRHPHMRVGKGIAYVLF 389
VRV+R RVGKG AYV F
Sbjct: 355 VRVVRDAATRVGKGFAYVQF 374
>gi|322708946|gb|EFZ00523.1| nucleolar protein 12 [Metarhizium anisopliae ARSEF 23]
Length = 548
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 46/208 (22%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEF--------IKFGEIDSVRIRSVPIIDTKIPR 269
K RT+F+ N+ K KKTL+ + +++S+R RSV +P+
Sbjct: 203 KASRTVFLANVSTEAISSKAAKKTLLTHLSSVLDPHGMPVQKLESIRFRSVAFSTGSMPK 262
Query: 270 KGAILQKQI-NENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKG 327
+ A + K + S +AY VF + + A N + G HIR+D P
Sbjct: 263 RAAYITKSLMGATTKSTNAYAVFSTPAAARLVASKLNGTEVLGRHIRVDSVAHP------ 316
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC-GLN----------DLESS---------- 366
+P D ++ +FVGNL F V DE + G N D+E
Sbjct: 317 --SPT-DHRRCIFVGNLGF-VDDETVVNTTKEGENVEKKRTKVPSDIEEGLWRTFSKTGK 372
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREA 394
VE VRV+R P RVGKG AYV F +A
Sbjct: 373 VENVRVVRDPTTRVGKGFAYVQFYLTQA 400
>gi|440632842|gb|ELR02761.1| hypothetical protein GMDG_05705 [Geomyces destructans 20631-21]
Length = 590
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 50/235 (21%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF-------------GEIDSVRIRSVPIID 264
K RT+F+ N+ K KKTL+ F +++S+R RS +
Sbjct: 226 KAARTVFLANVSTNAITDKKAKKTLMDHMGSFIDDLPPPLDGSPKPKVESIRFRST-AYE 284
Query: 265 TKIPRKGAILQKQI-NENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPR 322
+ +P+K + K + S +AY+V+ S + EAA N V+ H+R+D P
Sbjct: 285 STLPKKASFATKALMAATTKSTNAYVVYTSSFAAREAAKRLNSTVVLDRHLRVDGVAHPA 344
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPF-------DVKDEEIYQLFCGLNDLESS--------- 366
K D ++ VFVGNL F D DE + +D+E
Sbjct: 345 K---------TDHRRCVFVGNLGFVDDESMMDEGDETQRKRSKIPSDIEEGLWRQFGKAG 395
Query: 367 -VEAVRVIRHPHMRVGKGIAYVLFK---TREAANLVIKRRNLKLRDRELRLSHAQ 417
VE+VRV+R RVGKG AYV FK EAA L +++ + R LR++ A+
Sbjct: 396 EVESVRVVRDEKTRVGKGFAYVQFKDANAVEAALLFNEKKFPPMLPRVLRVTRAK 450
>gi|145253298|ref|XP_001398162.1| nucleolar protein 12 [Aspergillus niger CBS 513.88]
gi|134083724|emb|CAK42963.1| unnamed protein product [Aspergillus niger]
Length = 521
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 61/258 (23%)
Query: 212 HRKEEGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEFIKF----------GEI 252
H + G D E K L RT+F+GN + K KKTL+K F ++
Sbjct: 174 HESQTG-DAESKELDKSNRTVFLGNVSSEAIKSKSAKKTLLKHLASFLSTLPESTGPHKV 232
Query: 253 DSVRIRSVPIIDTK-IPRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIG 309
+S+R RS +P++ + ++++ ++ +AY V+ + Q+ +A A N V+
Sbjct: 233 ESIRFRSTAFASGGGVPKRASFAKQEVLDDTTPCTNAYAVYSTVQAARKAPAALNGTVVL 292
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF---DVK----------------D 350
H+R+D P +P+ D K+ VFVGNL F +VK +
Sbjct: 293 DRHLRVDSVAHP--------SPI-DHKRCVFVGNLDFVDNEVKPDDEQKKKKKRAPADVE 343
Query: 351 EEIYQLF---CGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIK 400
E +++ F G ++ + +VE+VRV+R RVGKG AYV F + E A ++
Sbjct: 344 EGLWRTFNAHTGRSNKDKPKNGNVESVRVVRDSLTRVGKGFAYVQFYDQNCVEEALVLNG 403
Query: 401 RRNLKLRDRELRLSHAQQ 418
+ + R+LR+S A++
Sbjct: 404 KHYPPMLPRKLRVSRAKK 421
>gi|312385885|gb|EFR30277.1| hypothetical protein AND_00214 [Anopheles darlingi]
Length = 399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 29/194 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IF+GNLP + + + F +G I +VR R+ KIPR+ + + S+
Sbjct: 193 IFIGNLPPTINQNKVKSLFKPYGTILTVRFRTNE--GGKIPRRKDM------KKLKSLIC 244
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
YI F S+ E A A + ++ N IR+ CP ++K G K TVFVGN+
Sbjct: 245 YIRFSSKSEMEQACAMDGQLVEENRIRV---CPQKQKQIGA------TKSTVFVGNI--T 293
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLR 407
D E+Y F G+ ++E VR I + KG+A+V FK + +K L
Sbjct: 294 TTDNELYDFFSGV----GAIEYVRQIAN------KGVAFVCFKKGVSIKKALKLNQQPLN 343
Query: 408 DRELRLSHAQQNCT 421
R LR+ N T
Sbjct: 344 GRALRIMEVDPNRT 357
>gi|256073259|ref|XP_002572949.1| RNA binding protein [Schistosoma mansoni]
gi|353230968|emb|CCD77385.1| putative rna binding protein [Schistosoma mansoni]
Length = 547
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 83/202 (41%), Gaps = 54/202 (26%)
Query: 223 KLLRTIFVGNLPLKVKKK---TLIKEFIKFGEI-------DSVRIRSVPIIDTKIPRKGA 272
+L RTIFVGNLPL + KK L +K +I +SVR R V IP G
Sbjct: 299 RLSRTIFVGNLPLNITKKRIEALFNNVLKNNKISSSDCCVESVRFRGV------IPVTGG 352
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
+ LA A I G +D+A D
Sbjct: 353 T-------------------------SRLARKRAAITG-EFSVDKA-------TDNDKTH 379
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ VFVGNLPFD +EEIY L S+++VR+IR +G YV +
Sbjct: 380 CKLDNCVFVGNLPFDCTEEEIYSTLSTL----GSIKSVRLIRDSQTGAVRGFGYVAYNDP 435
Query: 393 EAANLVIKRRN-LKLRDRELRL 413
L I+ N L +R+R++R+
Sbjct: 436 SIIPLAIRSSNTLSIRERQIRI 457
>gi|344247222|gb|EGW03326.1| RNA-binding protein 34 [Cricetulus griseus]
Length = 285
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FVGNLP+ KK L F ++G+I+SVR RSV + + +K A ++++ + + S+
Sbjct: 183 RTVFVGNLPVTCNKKKLKSLFKEYGQIESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 242
Query: 286 HAYIVFKSEQSTEAALAFNMAVI-GGNHIRLDRAC 319
+AY+VFK E + AL N A I G IR+D A
Sbjct: 243 NAYVVFKDESAATKALQRNGAQIEEGFRIRVDLAS 277
>gi|405123004|gb|AFR97769.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 597
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 111/301 (36%), Gaps = 101/301 (33%)
Query: 215 EEGFDDEGKLLRTIFVGNLPL-KVKKKTLIKE-------FIKFGEIDSVRIRSVPI---- 262
EE D+ + RT F+GNLP+ K K+++K+ F+ +I+S+R RSV
Sbjct: 168 EESVQDKNR--RTAFIGNLPIDAAKSKSILKQLRAHIMSFVPSAKIESLRFRSVAFATPT 225
Query: 263 ---------------------------------------------IDTKIPRKGAILQKQ 277
ID K RK A ++K
Sbjct: 226 AALPTEDPEKDANQRAKREKERAAAWKAKQNTDGEDAELDKAKVFIDAKGKRKVAFIKKD 285
Query: 278 INENADSVHAYIVFKSEQST------------EAALAF----NMAVIGGNHIRLDRA-CP 320
+ DS +AY+VF EAA F N + G IR+D P
Sbjct: 286 FHSEIDSCNAYVVFAYPHPDRAANVAPILDPFEAAAKFIASANSSTFSGRTIRVDSVRLP 345
Query: 321 PRKKLKGEDAPL----------YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS---- 366
L G L D KK++FVG L + K+E++ F L E
Sbjct: 346 SSVALAGASTSLSKRDAWLPSNTDPKKSLFVGGLDYAAKEEDVRVFFEELVKAERGANKE 405
Query: 367 -----VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQN 419
V VR++R ++GKG YV F RE+ L + + +K R LR+ Q
Sbjct: 406 GSGKWVTGVRIVRDKETQLGKGFGYVHFADRESVEEILAMDAKQIKFAKRTLRV----QP 461
Query: 420 C 420
C
Sbjct: 462 C 462
>gi|58264448|ref|XP_569380.1| RNA-binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110097|ref|XP_776259.1| hypothetical protein CNBC6480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258931|gb|EAL21612.1| hypothetical protein CNBC6480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225612|gb|AAW42073.1| RNA-binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 584
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 110/301 (36%), Gaps = 101/301 (33%)
Query: 215 EEGFDDEGKLLRTIFVGNLPL-KVKKKTLIKE-------FIKFGEIDSVRIRSVPI---- 262
EE D+ + RT F+GNLP+ K K+ +K+ F+ +I+S+R RSV
Sbjct: 161 EESVQDKNR--RTAFIGNLPIDAAKSKSTLKQLRAHIMSFVPSAKIESLRFRSVAFATPT 218
Query: 263 ---------------------------------------------IDTKIPRKGAILQKQ 277
ID K RK A ++K
Sbjct: 219 AALPTEDPEKDANQRAKREKERAAAWKAKQNADGEDAELDKAKVFIDAKGKRKVAFIKKD 278
Query: 278 INENADSVHAYIVFKSEQST------------EAALAF----NMAVIGGNHIRLDRA-CP 320
+ DS +AY+VF EAA F N + G IR+D P
Sbjct: 279 FHSEIDSCNAYVVFAYPHPDRAANVAPILDPFEAAAKFIASANSSTFSGRTIRVDSVRLP 338
Query: 321 PRKKLKGEDAPL----------YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS---- 366
L G L D KK++FVG L + K+E++ F L E
Sbjct: 339 SSVGLAGASTSLSKRDAWLPSNTDPKKSLFVGGLDYAAKEEDVRVFFEELVKAERGANKE 398
Query: 367 -----VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQN 419
V VR++R ++GKG YV F RE+ L + + +K R LR+ Q
Sbjct: 399 GSGKWVTGVRIVRDKETQLGKGFGYVHFADRESVEEILAMDAKQIKFAKRTLRV----QP 454
Query: 420 C 420
C
Sbjct: 455 C 455
>gi|350633199|gb|EHA21565.1| hypothetical protein ASPNIDRAFT_214483 [Aspergillus niger ATCC
1015]
Length = 515
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 83/331 (25%)
Query: 161 NKKTKKRKRDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDMLV--------- 211
++K K+ +DVE Y+ + KE+E ++ +++K D E E+
Sbjct: 95 SRKRKRTTAEDVEDTYMRRIAKEQKKEDEKRREEKAKRQKTVDGEQEEDAEQSEEEDDDE 154
Query: 212 --------------HRKEEGFDDEGKLL----RTIFVGN-----LPLKVKKKTLIKEFIK 248
H + G D E K L RT+F+GN + K KKTL+K
Sbjct: 155 ESSEEDEEKKAVPKHESQTG-DAESKELDKSNRTVFLGNVSSEAIKSKSAKKTLLKHLAS 213
Query: 249 F----------GEIDSVRIRSVPIID-TKIPRKGAILQKQI-NENADSVHAYIVFKSEQS 296
F +++S+R RS +P++ + ++++ ++ +AY V+ + Q+
Sbjct: 214 FLSTLPESTGPHKVESIRFRSTAFASGGGVPKRASFAKQEVLDDTTPCTNAYAVYSTVQA 273
Query: 297 T-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF---DVK--- 349
+A A N V+ H+R+D P +P+ D K+ VFVGNL F +VK
Sbjct: 274 ARKAPAALNGTVVLDRHLRVDSVAHP--------SPI-DHKRCVFVGNLDFVDNEVKPDD 324
Query: 350 ------------DEEIYQLF---CGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLFK 390
+E +++ F G ++ E +VE+VRV+R RVGKG AYV F
Sbjct: 325 EQKKKKRAPADVEEGLWRTFNAHTGRSNKEKPKNGNVESVRVVRDSLTRVGKGFAYVQFY 384
Query: 391 TR---EAANLVIKRRNLKLRDRELRLSHAQQ 418
+ E A ++ + + R+LR+S A++
Sbjct: 385 DQNCVEEALVLNGKHYPPMLPRKLRVSRAKK 415
>gi|357617310|gb|EHJ70713.1| hypothetical protein KGM_00562 [Danaus plexippus]
Length = 514
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 219 DDEGKLLRTIFVGNLPLKVK-KKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
D E ++ RTIFVGN+P K KK L K F ++G+I++VRIR+VP+ D ++ K A+++ +
Sbjct: 431 DTEDEIQRTIFVGNVPFSTKCKKELKKIFNQYGQIETVRIRTVPVKDARVTPKMAVIKNE 490
Query: 278 INENADSVHAYIVF 291
++ + +V+AYI F
Sbjct: 491 LHPDRTTVNAYIKF 504
>gi|321252996|ref|XP_003192590.1| RNA-binding protein [Cryptococcus gattii WM276]
gi|317459059|gb|ADV20803.1| RNA-binding protein, putative [Cryptococcus gattii WM276]
Length = 593
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 107/302 (35%), Gaps = 102/302 (33%)
Query: 215 EEGFDDEGKLLRTIFVGNLPLKVKK--------KTLIKEFIKFGEIDSVRIRSVPI---- 262
EE D+ + RT F+GNLP+ K + I F+ +I+S+R RSV
Sbjct: 165 EESVQDKNR--RTAFIGNLPIDAAKSKSTLKQLRAHIMSFVPSAKIESLRFRSVAFATPT 222
Query: 263 ---------------------------------------------IDTKIPRKGAILQKQ 277
ID K RK A ++K
Sbjct: 223 AALPTEDPEKDANQRAKREKERAAAWKAKQNADGEDAELDKAKVFIDAKGKRKVAFIKKD 282
Query: 278 INENADSVHAYIVFKSEQSTEAA----------------LAFNMAVIGGNHIRLDRACPP 321
+ DS +AY+VF AA A N + G IR+D P
Sbjct: 283 FHSEIDSCNAYVVFAYPHPERAANVAPILDPFEAAAKFISAANSSTFCGRTIRVDSVRLP 342
Query: 322 RK---------KLKGEDAPL---YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS--- 366
L DA L D KK++FVG L + K+E++ F L E
Sbjct: 343 SSASLPAGASTSLSKRDAWLPSNTDPKKSLFVGGLDYAAKEEDVRVFFEELVKAERGANK 402
Query: 367 ------VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQ 418
V VR++R ++GKG YV F RE+ L + + +K R LR+ Q
Sbjct: 403 EGSGKWVTGVRIVRDKETQLGKGFGYVHFADRESVEEVLAMDAKQIKFAKRTLRV----Q 458
Query: 419 NC 420
C
Sbjct: 459 PC 460
>gi|221053933|ref|XP_002261714.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193808174|emb|CAQ38877.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 399
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 18/184 (9%)
Query: 221 EGKLLRTIFVGNLPLK--VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK--GAILQK 276
E K RT+FVGNLPLK K K L +K ++SVR RS P+ + RK G IL K
Sbjct: 143 EDKDKRTVFVGNLPLKDMHKGKLLKLLDLKNSAVESVRFRSQPMEEAYAGRKRLGVIL-K 201
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
+ + D+ +A I K E+S L N V G +R++ + GE P ++ K
Sbjct: 202 KFTDVKDNQNAMITLKKEESLPGLLKKNGMVYEGYVLRIN--------MFGE-KPNFNRK 252
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
K+V + NL + + ++Y L L D++ ++ +R++R V G+++VLF+ R +
Sbjct: 253 KSVCIKNLDRKINESDLYNL---LKDVD-QIKGIRILRDERTSVSTGVSFVLFENRSSVK 308
Query: 397 LVIK 400
I+
Sbjct: 309 KAIE 312
>gi|295665262|ref|XP_002793182.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278096|gb|EEH33662.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 611
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 148/354 (41%), Gaps = 105/354 (29%)
Query: 160 ENKKTKKRK-RDDVEKDYVEKKYGVIAKEEEGKKVGVGEKRK---KADNETEDMLVHRKE 215
EN + +KR DD+E Y+++ AKEEE +++ ++RK +N++E + E
Sbjct: 132 ENGRKRKRAGADDLEGAYMQRIVKEEAKEEEKRRIEKAKRRKVENAVENDSEPLASESDE 191
Query: 216 EGFDDE------------------------GKLLRTIFVGNLPL-----KVKKKTLIKEF 246
EG + K RT+F+ N+ K KK L+K
Sbjct: 192 EGNSESESDCISSPPPVHESLTDTVDSAVLDKSARTVFLSNVSTEAIKSKTAKKALLKHL 251
Query: 247 IKF----------GEIDSVRIRSVPIIDTKIPRKGAILQKQINENAD-SVHAYIVFKSEQ 295
F +I+S+R RS +P++ A ++++ ++ S +AY+V+ +
Sbjct: 252 SSFFPSLPDSTTPHKIESIRFRSTAFSTNAMPKRAAYAKRELMDSTTRSTNAYVVYTTTV 311
Query: 296 ST-EAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL---------- 344
+ A A N + + H+R+D P +P+ D K+ +FVGNL
Sbjct: 312 AARRAPKALNGSFVLDRHLRVDSVSHP--------SPI-DYKRCIFVGNLGFVDEETPTE 362
Query: 345 -------------PFDVKDEEIYQLF-----CGLNDLESS-------------------V 367
P DV +E +++ F + L S V
Sbjct: 363 EKAVQQTKKKNTPPADV-EEGLWRTFNEHTHSAIAKLSKSLAKSKGSDASNINNPAIGPV 421
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQ 418
E VRVIR P R+GKGIAYV F E A L+ ++ + R+LR++ A++
Sbjct: 422 EFVRVIRDPATRIGKGIAYVQFHDENAVETALLLDGQKFPPMLPRKLRVTRAKR 475
>gi|390603406|gb|EIN12798.1| hypothetical protein PUNSTDRAFT_131036 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 640
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 48/196 (24%)
Query: 269 RKGAILQKQINENADSVHAYIVFKSEQSTEAAL---------------AFNMAVIGGN-- 311
+K A ++ +++ N DS+ AYIVF + + A A AV+ G+
Sbjct: 315 KKVAFIKGELHPNVDSIVAYIVFAHPKPVQEASDAPTSQQHKIMNPFEAAQQAVLNGDGT 374
Query: 312 -----HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE-- 364
+R+D A P D + D K +VFVGNL F K+E++ F L E
Sbjct: 375 VFMEHTLRVDHARPSEASKVAGDIAMGDPKLSVFVGNLDFATKEEDLRVFFEALLSTERG 434
Query: 365 ------------------SSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNL 404
S V VRV+R ++GKG AYV F RE + L ++ L
Sbjct: 435 PPPAPGPDTIENIPAKRISWVTKVRVVRDRDTQMGKGFAYVQFLDRECVDEVLALEPERL 494
Query: 405 KLRDRELRLSHAQQNC 420
K R+LR+ Q C
Sbjct: 495 KFAKRKLRV----QRC 506
>gi|156093389|ref|XP_001612734.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148801608|gb|EDL43007.1| RNA binding protein, putative [Plasmodium vivax]
Length = 491
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 18/184 (9%)
Query: 221 EGKLLRTIFVGNLPLK--VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK--GAILQK 276
E K R++F+GNLPLK K K L +K ++SVR RS P+ + RK G IL K
Sbjct: 227 EDKAKRSVFIGNLPLKDMHKAKLLKLLDLKKSAVESVRFRSQPMEEAYAARKKLGVIL-K 285
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
+ + D+ +A I K E+S L N V G +R++ + GE P ++ K
Sbjct: 286 KFTDAKDNQNAIITLKKEESLPDLLKKNGLVHEGYVLRIN--------MLGE-KPTFNRK 336
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
K+V + NL + + ++Y+L +++ + +R++R V G+++VLF+ R +
Sbjct: 337 KSVCIKNLDRKLNESDLYRLLKDVDE----IRGIRILRDERTSVSTGVSFVLFQNRSSVK 392
Query: 397 LVIK 400
I+
Sbjct: 393 KAIE 396
>gi|396472606|ref|XP_003839165.1| similar to nucleolar protein 12 [Leptosphaeria maculans JN3]
gi|312215734|emb|CBX95686.1| similar to nucleolar protein 12 [Leptosphaeria maculans JN3]
Length = 555
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 61/258 (23%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RT+F+ N+ K +K L K F +I+S+R RS + +
Sbjct: 234 KASRTVFLSNVSSECINSKAAEKALRKHLESFLVDLADNNPPHKIESIRFRSTAFASS-L 292
Query: 268 PRKGAILQKQI-NENADSVHAYIVFKSEQST-EAALAFNMAVIGGNHIRLDRACPPRKKL 325
P++ A +K+I + S +AY V+ ++ + EA N ++ H+ +D P K
Sbjct: 293 PKRAAFAKKEIMDSTTKSTNAYAVYTTKVAAREAVKRLNGTLLLDRHLHVDSVAHPAK-- 350
Query: 326 KGEDAPLYDIKKTVFVGNLPF--------------------DVKDEEIYQLFCGLNDLES 365
D ++ VFVGNLPF DV +E ++ F +ES
Sbjct: 351 -------VDHRRCVFVGNLPFVDDREPASTDEKPKKPRPSSDV-EEGLWVHFAKAGKIES 402
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQNCTP 422
VRV+R R+GKG AYV F EAA + +++ L R LR++ C
Sbjct: 403 ----VRVVRDAQTRIGKGFAYVQFVDENGVEAALQLNEKKFPPLLPRILRVTR----CKA 454
Query: 423 SKRKDVAPAVNSPPKKFV 440
K+KD A PP K +
Sbjct: 455 EKKKDKTRA--PPPTKLL 470
>gi|296472242|tpg|DAA14357.1| TPA: RNA binding motif protein 34 [Bos taurus]
Length = 273
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIQINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMA 306
+ + +K A ++++I+ + +++AY+VFK E + AL N A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKALERNGA 265
>gi|124802467|ref|XP_001347479.1| NOP12-like protein [Plasmodium falciparum 3D7]
gi|23495060|gb|AAN35392.1| NOP12-like protein [Plasmodium falciparum 3D7]
Length = 322
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 106/198 (53%), Gaps = 17/198 (8%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRKG-AILQKQINENA 282
RTIFVGN+P+K V L+K I+ +++VR RS+P+ + +K +++K+ +
Sbjct: 78 RTIFVGNIPIKDVSISKLLKILNIEKSIVETVRFRSLPLEEKYADKKRLGVMRKKFTDVK 137
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +A + K E+ L N V G +R++ K D+ + KK++ +
Sbjct: 138 DNKNALVTLKEEKDVPLLLERNGTVYEGYVLRVN---------KFGDSKSFSRKKSICIK 188
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NL + ++++Y++ + D+++ ++ VR++R + G A++LF++R A I++
Sbjct: 189 NLCKKLNEKDLYEI---MKDVDT-IKGVRILRDTATSMSTGTAFILFESRSAVKKAIQQF 244
Query: 403 N-LKLRDRELRLSHAQQN 419
N + DR++ + Q +
Sbjct: 245 NGYTINDRQIVVEKVQDD 262
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 41/208 (19%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++ ++VG L V + L EF G PI+D ++ I + ++
Sbjct: 357 IKNVYVGGLSWNVDSEWLKSEFESCG----------PIVDARV-----ITDRDTQKSKG- 400
Query: 285 VHAYIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDAPL---YDIKK--- 337
YI F++ + + A+ N + G +++D + P + E AP D K
Sbjct: 401 -FGYIDFETCEGAQKAIETKNGTELDGRTLKVDLSAP-----RAERAPAENKRDFSKEEL 454
Query: 338 -----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
T+FVGNLPF + ++++F D+ S VR+ P + KG YV F T
Sbjct: 455 SAESTTLFVGNLPFSATQDSVWEIFAEYGDVNS----VRLPTDPETQRVKGFGYVEFATL 510
Query: 393 EAANLVIKR---RNLKLRDRELRLSHAQ 417
E+A +++ + + +R+ RL +Q
Sbjct: 511 ESARAAVEKGRGEGVYIDNRQARLDFSQ 538
>gi|336365470|gb|EGN93820.1| hypothetical protein SERLA73DRAFT_171723 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378029|gb|EGO19188.1| hypothetical protein SERLADRAFT_364031 [Serpula lacrymans var.
lacrymans S7.9]
Length = 592
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 114/297 (38%), Gaps = 106/297 (35%)
Query: 226 RTIFVGNLPLKV-KKKTLIKEF-------IKFGEIDSVRIRSVPIID--TKIP------- 268
RTIFVGNL + V +KKTL+K+F + +I+S R RS + +K+P
Sbjct: 177 RTIFVGNLSVNVAQKKTLLKQFQRHIISHVPTAKIESTRFRSAAFQNPTSKLPGDDDDDS 236
Query: 269 -----------------------------------------RKGAILQKQINENADSVHA 287
+K A + + + +ADSV+A
Sbjct: 237 KSKSSKGRQHDRDRTTSWRSSKPDEDDFKTDEKKFLTPNQKKKIAFINHEFHPSADSVNA 296
Query: 288 YIVFKS---------------------EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK 326
Y+VF E + A N + IR+D A ++
Sbjct: 297 YVVFSHPLPAASRAPNVPPPAPVMDPYEAARLAVETCNGTIFMDRMIRVDFASKTAAQVA 356
Query: 327 GEDAP------LYDIKKTVFVGNLPFDVKDEEIYQLFCGL---------------NDLES 365
A + D K +VFVGNL F K+E++ F G+ L+S
Sbjct: 357 VASAAAISGAMVGDPKLSVFVGNLDFASKEEDLRVFFEGIVSAERGAPDGETDVGEKLKS 416
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQNC 420
V VR++R ++GKG AYV F RE + L ++ LK R+LR+ Q C
Sbjct: 417 WVTRVRIVRDKDTQLGKGFAYVQFADRECVDEVLALEEGKLKFAKRKLRV----QRC 469
>gi|123468140|ref|XP_001317333.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121900064|gb|EAY05110.1| hypothetical protein TVAG_108440 [Trichomonas vaginalis G3]
Length = 332
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 101/197 (51%), Gaps = 18/197 (9%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII-DTKIPRKGAILQKQIN--ENA 282
RT+F+GN+P K + + +FG I+SVRIR++ D K+ +K A+ + + +NA
Sbjct: 62 RTLFIGNIPAKFDNDDVKRLCKEFGPIESVRIRNLQFKEDRKVNKKVAVRRGDFDKTQNA 121
Query: 283 DSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPR--KKLKGEDAPLYDIKKTV 339
D AY+VFK+ E +A + + G +R D+A P +K+ E++ +TV
Sbjct: 122 D---AYVVFKNVEDRDKAIVGLKNKEVEGFTLRTDKATPKNVSEKISNEES-----NRTV 173
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
F+G L V ++ + +LF + ++ V++ R + +AYV F + + +
Sbjct: 174 FIGQLKPTVTEDMLRKLFSNAGE----IDHVKIPRDRETGKSRYVAYVTFVDERSVDDAL 229
Query: 400 KRRNLKLRDRELRLSHA 416
K L ++++R+ +
Sbjct: 230 KFDGTFLEEKQMRVERS 246
>gi|388582627|gb|EIM22931.1| hypothetical protein WALSEDRAFT_6282, partial [Wallemia sebi CBS
633.66]
Length = 370
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 63/255 (24%)
Query: 226 RTIFVGNLPLKVKK-----KTLIKEFIKFGEI------DSVRIRSVPI-IDT-------- 265
RT+FVGN+P + K K L++ ++ ++ DS+R RSV + T
Sbjct: 10 RTVFVGNIPAEAAKSKPLSKKLVRHLMEISDLPPTAKYDSIRFRSVAFSVPTSASAKSNA 69
Query: 266 --------KIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL---------------- 301
K RK A +++ ++ +A SV+AY+VF +S + L
Sbjct: 70 DNKRYQTPKQKRKVAFIKQDLHPDAASVNAYVVFGYRRSNDVVLLNNKDKDIPPSEVAQK 129
Query: 302 ---AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFC 358
A N + G +R+DR K K+T++VG L F KD E+ +
Sbjct: 130 VVDAANGSTFEGRILRVDRVLNVDKTGTRWHIDKDMAKRTLYVGRLDFGQKDNELGEFIE 189
Query: 359 GLNDLE--------------SSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRR 402
L + E S V VR++R P ++GKG YV + L++
Sbjct: 190 KLLNEEKGTYKSKDADDKAKSWVRGVRIVRDPDTQLGKGFGYVHLADNDCVEELLLLPDE 249
Query: 403 NLKLRDRELRLSHAQ 417
+L R LR + ++
Sbjct: 250 RRRLNKRTLRFAKSK 264
>gi|68062875|ref|XP_673446.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491300|emb|CAI01718.1| conserved hypothetical protein [Plasmodium berghei]
Length = 196
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRKG-AILQKQINENA 282
RT+FVGN+PL V L+K I ++S+R RS+P+ + +K I+ K+ +
Sbjct: 5 RTVFVGNIPLNDVSNLKLLKILGINKSLVESIRFRSLPLEEKYANKKKLGIMLKKFTDVK 64
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +A I K ++ L N V G+ +R+++ C D + KK+V +
Sbjct: 65 DNKNALIRMKRKEDISLLLDKNGTVYNGHVLRINK-CG--------DQNYFSRKKSVCLK 115
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NL + ++++Y+LF +++ ++ VR++R +G+A++LFK R + IK
Sbjct: 116 NLDRSLSEKDLYELFKDIDE----IKGVRILRDVENSQSRGVAFILFKNRASVKTAIKMF 171
Query: 403 NLK-LRDR 409
N K ++DR
Sbjct: 172 NGKEIKDR 179
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 39/234 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E E+ K E D + +F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 215 KKRKADSEPEETSKKAKTESNPD---AVANLFIGNLSWNVDEEWLTREFEEFGELAGVRI 271
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I D R Y+ F + + AL A N +++ +IR+D
Sbjct: 272 ----ITDRDSGRSKGF-------------GYVEFTNAEDAAKALEAKNESLLDNRNIRVD 314
Query: 317 RACPPRKKLKGE------------DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
+ P K G DAP + T++ GNL FD ++ + + F
Sbjct: 315 FSTPRDKSNAGPQQRSNDRQQKFGDAP-GEPTATIWCGNLSFDATEDVVREYFA----EH 369
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSHAQ 417
+V ++R+ KG YV + E A + + R +RL +AQ
Sbjct: 370 GNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRLDYAQ 423
>gi|70943753|ref|XP_741886.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520546|emb|CAH84921.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 239
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 226 RTIFVGNLPLK-VKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIP-RKGAILQKQINENA 282
RT+FVGN+PL V L+K I ++SVR RS+P+ + +K ++ K+ +
Sbjct: 61 RTVFVGNIPLNDVSNLKLLKILGINKSLVESVRFRSLPLEEKYANNKKLGVMLKKFTDVK 120
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
D+ +A I K ++ L N V G +R++ K D + KK+V V
Sbjct: 121 DNKNALIRMKRKEDVSLLLKKNGTVYNGYVLRVN---------KFGDQSNFSRKKSVCVK 171
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
NL + ++++Y+LF G+++ ++ VR++R +G+A++LF+ R++
Sbjct: 172 NLDRSLSEKDLYELFKGVDE----IKGVRILRDLENSQSRGVAFILFENRDSV 220
>gi|409042311|gb|EKM51795.1| hypothetical protein PHACADRAFT_262138 [Phanerochaete carnosa
HHB-10118-sp]
Length = 407
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 48/217 (22%)
Query: 272 AILQKQINENADSVHAYIVFKS---------------------EQSTEAALAFNMAVIGG 310
A ++++I+ DSV+AYIVF E + A A + +V
Sbjct: 88 AFIKQEIHSGVDSVNAYIVFAHPVPAESRPKNLPPLKPIMDPYEAAKAAIRAADGSVFMD 147
Query: 311 NHIRLDRACPPRKKLK---GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL------- 360
+RLD A + K + ++P D K T+FVGNL F K+E++ F GL
Sbjct: 148 RTLRLDLAAKGKGKAREIVNAESP-DDPKATIFVGNLDFAAKEEDVRVFFEGLVVTERGE 206
Query: 361 -----------NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLR 407
+D ++ V+ VR+IR +GKG YV F RE + L +++ LK
Sbjct: 207 PTEIQAEDAERSDEKAWVKRVRLIRDKDTLLGKGFGYVQFMDRECVDEILALEQDRLKFA 266
Query: 408 DRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSR 444
R+LR+ + SK VAPA S K V+ ++
Sbjct: 267 KRKLRVQRCKTLPGASK---VAPARPSAQTKTVVQTK 300
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 37/245 (15%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K V K++KA+ E K + D E +FVGN+ V ++ L +EF
Sbjct: 205 EEEKPKAVESKKRKAEAEPAHATKKNKTDAVD-ESAPTGNLFVGNISWNVDEEWLTREFE 263
Query: 248 KFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNM 305
+FGE+ VRI I D R KG Y+ F Q+ + AL A N
Sbjct: 264 EFGELAGVRI----ITDRDSGRSKG--------------FGYVEFSDPQNAKKALEAKNG 305
Query: 306 AVIGGNHIRLDRACP-----PRKKLKGED--APLYDI----KKTVFVGNLPFDVKDEEIY 354
A + G +RLD + P P K D A D T+FVGN+ FD + I
Sbjct: 306 AELDGRELRLDFSTPRTNDGPGAGNKSNDRAARFGDTTNAPAATLFVGNISFDADENAIT 365
Query: 355 QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV-LFKTREAANLVIKRRNLKLRDRELRL 413
+ F +++AVR+ KG YV + EA + + R +RL
Sbjct: 366 EYF----QEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRL 421
Query: 414 SHAQQ 418
+A +
Sbjct: 422 DYAAE 426
>gi|384250449|gb|EIE23928.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 358
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 30/201 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +++ ++ + + F++ G P+++ +P+ Q Q +
Sbjct: 30 TVYVGNLDVQLSEELVWELFVQSG----------PVVNVYLPKDRVTSQHQ-------GY 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FKSE + A+ NM + G IR+++A +D D+ +F+GN+
Sbjct: 73 GFVEFKSEDDADYAIKILNMIKVYGKPIRVNKAS--------QDKKTQDVGANLFIGNID 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + ++ +++R P KG +V + + EA++ I+ N +
Sbjct: 125 PDVDEKLLYDTFSAFGMI---IQTPKIMRDPETGATKGFGFVSYDSFEASDAAIEAMNGQ 181
Query: 406 -LRDRELRLSHAQQNCTPSKR 425
L +R + +S A + T +R
Sbjct: 182 FLCNRPITVSFAYKKDTKGER 202
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G VR SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGP---VRTVSVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E + AL NM + G +RL+++ R+ +D+ VF+GNL
Sbjct: 73 GFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRN--------FDVGANVFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ IY F ++ S+ +++R P + +G +V F T EA++ + N +
Sbjct: 125 PDVDEKTIYDTFSAFGNIISA----KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQ 180
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
+ +R + +S+A + T +R A
Sbjct: 181 FICNRPIHVSYAYKKDTRGERHGSA 205
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 102/208 (49%), Gaps = 37/208 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL ++ ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TVYVGNLDAQLSEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQNY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I ++SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 69 GFIEYRSEEDADYAIKVLNMIKVHGKPIRVNKASQDKKSL--------DVGANLFIGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + S+ +++R P +G ++ + + EA++ I+ +
Sbjct: 121 PDVDEKLLYDTFSAFGVIASN---PKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMTGQ 177
Query: 406 -LRDRELRLSHA-------QQNCTPSKR 425
L +R++ +S+A +++ TP++R
Sbjct: 178 YLSNRQITVSYAYKKDTKGERHGTPAER 205
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G VR SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGP---VRTVSVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E + AL NM + G +RL+++ R+ +D+ VF+GNL
Sbjct: 73 GFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRN--------FDVGANVFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ IY F ++ S+ +++R P + +G +V F T EA++ + N +
Sbjct: 125 PDVDEKTIYDTFSAFGNIISA----KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQ 180
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
+ +R + +S+A + T +R A
Sbjct: 181 FICNRPIHVSYAYKKDTRGERHGSA 205
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 31/205 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G VR SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGP---VRTVSVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E + AL NM + G +RL+++ R+ +D+ VF+GNL
Sbjct: 73 GFVEFRNEVDADYALKLMNMVKLYGKALRLNKSAQDRRN--------FDVGANVFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ IY F ++ S+ +++R P + +G +V F T EA++ + N +
Sbjct: 125 PDVDEKTIYDTFSAFGNIISA----KIMRDPETGLSRGFGFVSFDTFEASDAALAAMNGQ 180
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
+ +R + +S+A + T +R A
Sbjct: 181 FICNRPIHVSYAYKKDTRGERHGSA 205
>gi|158519849|ref|NP_001103552.1| RNA-binding protein 34 [Bos taurus]
gi|158455018|gb|AAI09867.1| RBM34 protein [Bos taurus]
Length = 272
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 204 NETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPII 263
N+ + + ++++EE +E RT+FVGNLP+ KK L F ++G+I+SVR RS+
Sbjct: 167 NQRKKIQINQEEERLKNE----RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPA 222
Query: 264 DTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
+ + +K A ++++I+ + +++AY+VFK E + A
Sbjct: 223 EGTLSKKLAAIKRKIHPDQKNINAYVVFKDESAATKA 259
>gi|291224886|ref|XP_002732430.1| PREDICTED: splicing factor 3b, subunit 4-like [Saccoglossus
kowalevskii]
Length = 388
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEALLWELFLQSG----------PVVNTHMPKDRVTQQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM I G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKIYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPESGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITISYA 177
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 30/201 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL +V ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQGY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G IR+++A +K L D+ +FVGNL
Sbjct: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL--------DVGANLFVGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + V +++R P +G +V + + EA++ I+ N +
Sbjct: 121 PDVDEKLLYDTFSAFGVI---VTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQ 177
Query: 406 -LRDRELRLSHAQQNCTPSKR 425
L +R++ +S+A + T +R
Sbjct: 178 YLCNRQITVSYAYKKDTKGER 198
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 28/199 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIFVG L V L +EF + GE+ S R+ Q N
Sbjct: 44 KTIFVGKLSWNVDNDWLAQEFAECGEVVSARV-----------------QMDRNTGKSRG 86
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIKKT-----V 339
Y+ F + ++ +AA+A N I G + +D++ K ++ + A Y K + +
Sbjct: 87 FGYVTFATVEAVDAAIAQNGKEIDGRAVNIDKSIEKDKGAVRQKRAEAYGDKASEPSSVL 146
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVGNL +D ++ +++ F D++S VRV KG AYV F EA+
Sbjct: 147 FVGNLSWDATEDTLWETFNEYGDIKS----VRVPTDRETGKPKGFAYVEFSDIEASKKAF 202
Query: 400 K-RRNLKLRDRELRLSHAQ 417
+ ++ R +R+ +Q
Sbjct: 203 EGAAGAEVAGRNIRVDFSQ 221
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ +Q Q +
Sbjct: 14 TIYVGGLDEKVNESILWELFLQAG----------PVVNVHMPKDRINMQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L DI +F+GNL
Sbjct: 57 GFVEFMTEEDADYAMRIMNMIKLYGKPIRVNKASANQKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRAITISYA 177
>gi|239607831|gb|EEQ84818.1| nucleolar protein 12 [Ajellomyces dermatitidis ER-3]
Length = 532
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 52/228 (22%)
Query: 162 KKTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADN---ETEDMLVHRKE 215
+K +KRKR DD+E+ Y+ + AKE+E ++ ++RK + E++ +
Sbjct: 35 EKGRKRKRGGADDLEESYMRRMAKEDAKEDEKRRSEKAKRRKVVETVGRESDSSDSEGND 94
Query: 216 EGFDD----------------EGKLL----RTIFVGNLPL-----KVKKKTLIKEFIKF- 249
EG +D + LL RT+F+ N+ K KKTL++ F
Sbjct: 95 EGNEDSIASPPPLHESLSNNPDAALLDKSARTVFLSNVSTEAIKSKSAKKTLLRHLSSFI 154
Query: 250 ---------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQST-E 298
+I+S+R RS +P++ A ++++ + S +AY+V+ + +
Sbjct: 155 PSLPESATPHKIESIRFRSTAFATRSMPKRAAYAKRELMDSTTRSTNAYVVYTTTAAARR 214
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
A A N +VI H+R+D P AP+ D K+ +FVGNL F
Sbjct: 215 APQALNGSVILDRHLRVDSVAHP--------APV-DYKRCIFVGNLGF 253
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQ 418
VE+VRV+R P R+GKGIAYV F+ EAA L+ ++ L R LR++ A++
Sbjct: 338 VESVRVVRDPATRIGKGIAYVQFRDENAVEAALLLDGQKFPPLLPRRLRVTRAKR 392
>gi|327358075|gb|EGE86932.1| nucleolar protein 12 [Ajellomyces dermatitidis ATCC 18188]
Length = 617
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 54/235 (22%)
Query: 162 KKTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADN---ETEDMLVHRKE 215
+K +KRKR DD+E+ Y+ + AKE+E ++ ++RK + E++ +
Sbjct: 120 EKGRKRKRGGADDLEESYMRRMAKEDAKEDEKRRSEKAKRRKVVETVGRESDSSDSEGND 179
Query: 216 EGFDD----------------EGKLL----RTIFVGNLPL-----KVKKKTLIKEFIKF- 249
EG +D + LL RT+F+ N+ K KKTL++ F
Sbjct: 180 EGNEDSIASPPPLHESLSNNPDAALLDKSARTVFLSNVSTEAIKSKSAKKTLLRHLSSFI 239
Query: 250 ---------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQST-E 298
+I+S+R RS +P++ A ++++ + S +AY+V+ + +
Sbjct: 240 PSLPESATPHKIESIRFRSTAFATRSMPKRAAYAKRELMDSTTRSTNAYVVYTTTAAARR 299
Query: 299 AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI 353
A A N +VI H+R+D P AP+ D K+ +FVGNL F DEE
Sbjct: 300 APQALNGSVILDRHLRVDSVAHP--------APV-DYKRCIFVGNLGF--VDEET 343
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTR---EAANLVIKRRNLKLRDRELRLSHAQQ 418
VE+VRV+R P R+GKGIAYV F+ EAA L+ ++ L R LR++ A++
Sbjct: 423 VESVRVVRDPATRIGKGIAYVQFRDENAVEAALLLDGQKFPPLLPRRLRVTRAKR 477
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 31/205 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V L + F++ G VR SVP + ++ N +
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGP---VRTVSVP-------------RDKLTGNHQG-Y 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E + AL NM + G +RL+++ R+ +D+ +F+GNL
Sbjct: 73 GFVEFTNEVDADYALKLMNMVKLYGKSLRLNKSAQDRRN--------FDVGANIFLGNLD 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ IY F ++ ++ +++R P + +G +V F T EA++ + N +
Sbjct: 125 PDVDEKTIYDTFSTFGNILTA----KIMRDPETGISRGFGFVSFDTFEASDAALAAMNGQ 180
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
+ +R + +S+A + T +R A
Sbjct: 181 FICNRPIHVSYAYKKDTRGERHGSA 205
>gi|307103265|gb|EFN51527.1| hypothetical protein CHLNCDRAFT_140240 [Chlorella variabilis]
Length = 142
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI---IDTKIPRKGAILQKQIN 279
+L RT+FVGNLP VK+K+L + F G ++SVR+RS+P+ +KIPR+GAI I+
Sbjct: 76 RLPRTVFVGNLPAHVKRKSLAQLFAGCGRVESVRLRSLPLQRDPTSKIPRRGAIASGAID 135
Query: 280 ENADSVHA 287
+ S HA
Sbjct: 136 AD-QSAHA 142
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 37/201 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L V L +EF GEI+S A +Q N
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIES-----------------ATVQMDRNTGKSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP--------PRKKLKGED--APLYDIKK 337
Y+ F + + E AL N I G I++DR+ P R + G++ AP
Sbjct: 44 YVHFTTPDAVEKALQMNGQEIDGRAIKVDRSLPRDKSQVREKRAQAFGDEVSAP----SS 99
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T+FVGNL F V ++ ++ F ND V++VR+ KG YV F+ + A
Sbjct: 100 TLFVGNLSFGVTEDTVWSFF---NDY--GVKSVRLPTDRETGRPKGFGYVEFEDIDGAKK 154
Query: 398 VIKRRN-LKLRDRELRLSHAQ 417
+ N ++ R +RL ++Q
Sbjct: 155 AFEAANGSEIEGRSIRLDYSQ 175
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVG L V L +EF GE+ S R+ Q N
Sbjct: 321 KTVFVGRLSWNVDNDWLAQEFADCGEVVSARV-----------------QMDRNTGKSRG 363
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRA----CPPRKKLKGEDAPLYDIKKTVF 340
++ F + + AA+A N I G + LD+ P ++ K +F
Sbjct: 364 FGFVEFATAEGANAAVALNGQKEIDGRAVNLDKTSAKPADPERRAKAFGDSTSAPSSVLF 423
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
VGN+ FD+ ++ ++++F +++S VR+ + KG YV F E+A +
Sbjct: 424 VGNVSFDMTEDGLWEVFAEYGEVKS----VRLPTDRDTQRLKGYGYVEFVDVESAKKAFE 479
Query: 401 -RRNLKLRDRELRLSHAQ 417
R + + R +RL +AQ
Sbjct: 480 GARGMDVGGRTIRLDYAQ 497
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 39/234 (16%)
Query: 198 KRKKADNETEDMLVHRKEEG----FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEID 253
KRK AD++ + E G + + + +FVG L V L EF GEI+
Sbjct: 295 KRKAADDDEPSTKKVKLENGSAAPAGGDAQQSKAVFVGQLSWNVDNDWLASEFASCGEIE 354
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHI 313
S A +Q N Y+ F + ++ + AL N I I
Sbjct: 355 S-----------------ATVQMDRNTGKSRGFGYVHFTTVEAAQKALELNGKEIDNRPI 397
Query: 314 RLDRACP--PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
++D + P P + D+ T+FVGNL F+ ++ ++ LF ND
Sbjct: 398 KVDISTPRNPDAARQKRAQTFGDVTSPPSNTLFVGNLSFNTSEDSVWSLF---NDY---- 450
Query: 368 EAVRVIRHPHMRVG---KGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQ 417
V+ +R P R KG YV F+ E A + N L R +RL ++Q
Sbjct: 451 -GVKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAFEANNGADLDGRPIRLDYSQ 503
>gi|71029664|ref|XP_764475.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351429|gb|EAN32192.1| hypothetical protein, conserved [Theileria parva]
Length = 324
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 38/194 (19%)
Query: 214 KEEGFDDEGKLLRTIFVGNLPLKVKKKT-LIKEF-IKFGEIDSVRIRSVPIIDTKIPR-- 269
KE +D + L +F+GN+PL +K K+ L+K+ I I SV RS+PI K R
Sbjct: 106 KENLYDPKDSAL--VFIGNVPLTIKTKSDLVKKLQIDPKIIQSVHFRSLPI-HPKYARNK 162
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED 329
K A+++++ ++ D+ +AY+ + L N
Sbjct: 163 KVAVIKQKFSDAKDNQNAYVKLSDPKYLNELLEKNK------------------------ 198
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+ KKTVFVG LP ++++Y +F + S V+AVR++R P KG +V F
Sbjct: 199 ---FSRKKTVFVGRLPPTANEDDLYNIFMNI----SPVKAVRIVRDPVTMKSKGFGFVAF 251
Query: 390 KTREAANLVIKRRN 403
R A I+ N
Sbjct: 252 DNRPAVVEAIRELN 265
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 101/208 (48%), Gaps = 37/208 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL +V ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQGY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G IR+++A +K L D+ +FVGNL
Sbjct: 69 GFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSL--------DVGANLFVGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + V +++R P +G +V + + EA++ I+ N +
Sbjct: 121 PDVDEKLLYDTFSAFGVI---VTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQ 177
Query: 406 -LRDRELRLSHA-------QQNCTPSKR 425
L +R++ +S+A +++ TP++R
Sbjct: 178 YLCNRQITVSYAYKKDTKGERHGTPAER 205
>gi|348684961|gb|EGZ24776.1| hypothetical protein PHYSODRAFT_484926 [Phytophthora sojae]
Length = 209
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 29/175 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + ++ G + +V + PR Q +
Sbjct: 13 TVYVGNLDDRVTEELLWELMLQAGSVCNVHM----------PRDKVTGSHQ-------NY 55
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ E A+ NM + G IR+ +A RK L D+ +F+GNL
Sbjct: 56 GFVEFRTEECAEYAVKVLNMVQLFGKAIRVKKASSDRKNL--------DVGANLFLGNLD 107
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+V ++ +Y F + +E +++R P + +G +V F + EAA+L I+
Sbjct: 108 PEVDEKLLYDTFSAFGGI---IETPKIMRDPDTKASRGFGFVSFDSFEAADLAIE 159
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 40/230 (17%)
Query: 200 KKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
+KAD+E+E+ + ++ E T+FVG L V + L KEF ++G + + R+
Sbjct: 183 RKADDESEE---QKPQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARV-- 237
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRA 318
I+D + R Y+ F S ++ +AA+A N I G + LD +
Sbjct: 238 --IMDGQSGRSKGF-------------GYVDFDSPEAAKAAVAVNGQKEIDGRMVNLDIS 282
Query: 319 CP-PRKKLKG---EDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
P P + G + A + K+ TVF+GNL F+ ++++ F SS
Sbjct: 283 TPRPAQNNNGFAQQRASNFGDKQSPPSDTVFIGNLSFNATEDDVRNAF-------SSCGE 335
Query: 370 VRVIRHP-HMRVG--KGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
++ +R P M G KG YV F + +AA ++ + R RL +
Sbjct: 336 IQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVEMNGHFIAGRPCRLDFS 385
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++IFVG L V L KEF + GE+ S ++ +D R
Sbjct: 332 IKSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQ----MDRSTGRSRGF----------- 376
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPP------RKKLKGEDAPLYDIKKT 338
Y+ F + ++ E A+ N I G + +D++ PP K+ K T
Sbjct: 377 --GYVHFSTSEAVEKAIELNGKEIDGRAVNVDKSNPPNKDASREKRAKTFGDTTSPPSAT 434
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKTREAA 395
+FVGNL F + D+ +++ F S V+ +R P R KG YV F E A
Sbjct: 435 LFVGNLSFGMNDDALWEAF-------SEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETA 487
Query: 396 NLV-IKRRNLKLRDRELRLSHAQ 417
+ ++L R +RL +Q
Sbjct: 488 KKAHAAMQGVELDGRSVRLDFSQ 510
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IFVG L V L +EF + GE+ S A +Q N
Sbjct: 309 SIFVGQLSWSVDNDRLAQEFSECGEVSS-----------------ATVQLDRNTGRSRGF 351
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIK-----KTVF 340
Y+ F + + E AL N I G I++D + PP +++ A +++ + T+F
Sbjct: 352 GYVHFSTADAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSSTLF 411
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKTREAANL 397
+GNLPF + ++ ++ F G +V+ IR P R G KG YV + E A
Sbjct: 412 IGNLPFSITEDGLWSYFDG--------HSVKTIRLPTDRETGQLKGFGYVELENVEDAKK 463
Query: 398 VIKR-RNLKLRDRELRLSHAQ 417
+ ++ R +R+ ++Q
Sbjct: 464 AFEAISGQEIEGRRVRVDYSQ 484
>gi|392573442|gb|EIW66582.1| hypothetical protein TREMEDRAFT_70147 [Tremella mesenterica DSM
1558]
Length = 591
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 46/196 (23%)
Query: 263 IDTKIPRKGAILQKQINENADSVHAYIVFKSE---------------QSTEAALAFNMAV 307
ID K RK A ++K ++ A + +AYIVF+ ++ AL + +
Sbjct: 279 IDAKGKRKVAFIKKDFHDQAATCNAYIVFEHPPPDRSKNLPPLMNPYEAANLALKADGSE 338
Query: 308 IGGNHIRLD--RACPPRKKLKGEDA------------PLYDIKKTVFVGNLPFDVKDEEI 353
+ G IR+D RA KG+DA D K+++FVG L + K+E++
Sbjct: 339 VMGRSIRVDVVRAS----GRKGDDADGTSKKRDGWLPSGTDPKRSLFVGGLDYAAKEEDV 394
Query: 354 YQLFCGLNDLESS-------VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN--L 404
F L E V VR++R ++GKG YV F RE+ + +I + L
Sbjct: 395 RVFFEELVKKERGDSPDGRWVTGVRIVRDKETQLGKGFGYVHFTDRESVDEIIALNSTKL 454
Query: 405 KLRDRELRLSHAQQNC 420
KL R++R+ Q C
Sbjct: 455 KLAKRDIRV----QQC 466
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+IFVG L V L +EF + GE+ S A +Q N
Sbjct: 309 SIFVGQLSWSVDNDRLAQEFSECGEVSS-----------------ATVQLDRNTGRSRGF 351
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIK-----KTVF 340
Y+ F + + E AL N I G I++D + PP +++ A +++ + T+F
Sbjct: 352 GYVHFSTADAVEKALKMNGYEIDGRAIKVDLSTPPNSNQIRERRAKVFNDEISPPSSTLF 411
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKTREAANL 397
+GNLPF + ++ ++ F G +V+ IR P R G KG YV + E A
Sbjct: 412 IGNLPFSITEDGLWSYFDG--------HSVKTIRLPTDRETGQLKGFGYVELENVEDAKK 463
Query: 398 VIKR-RNLKLRDRELRLSHAQ 417
+ ++ R +R+ ++Q
Sbjct: 464 AFEAISGQEIEGRRVRVDYSQ 484
>gi|225561960|gb|EEH10240.1| nucleic acid-binding protein [Ajellomyces capsulatus G186AR]
Length = 325
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 34/174 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 118 TIYVGNLFFEVTAEDLKRDMAKFGTIYSVRI----VYDSRGMSRG--------------F 159
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD----RACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S ++ EAA++ NM++ G I ++ + PR + + KT+F+
Sbjct: 160 AYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAAPRTRAS-------EPTKTLFI 212
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
GNL F++ D E+ LF + + V+ VRV +G A+ F E+A
Sbjct: 213 GNLSFEMTDRELNDLFRDIPN----VDDVRVSVDKRTGRPRGFAHADFLDVESA 262
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 33/181 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGN+ K ++ L + F++ G P+++ IPR + +VH
Sbjct: 16 TIYVGNITEKCTEEILWELFLQAG----------PVVNVHIPR----------DKVTTVH 55
Query: 287 A---YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
+ ++ F+SE+ E A+ NM + G +RL+ KK GE L D+ +F+G
Sbjct: 56 SGFGFVEFRSEEDAEYAIKIMNMIKLHGQPLRLN------KKASGEIKVL-DVGANLFIG 108
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NL +V ++ +Y F + + + +R P KG A+V + EAA++ I+
Sbjct: 109 NLEPEVDEKLLYDTFSAFGVIVGNTP--KCMRDPETGQSKGFAFVNYDCFEAADMAIEAM 166
Query: 403 N 403
N
Sbjct: 167 N 167
>gi|325186713|emb|CCA21261.1| RNA polymerase Ispecific transcription initiation factor rrn3
putative [Albugo laibachii Nc14]
Length = 988
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL KV ++ L + ++ G + ++ +PR Q +
Sbjct: 718 TIYIGNLDDKVSEELLWELMLQAGSV----------VNVHMPRDKVTTNHQ-------NY 760
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ E A+ NM + G IR+ +A +K L DI +F+GNL
Sbjct: 761 GFVEFRTEECAEYAIKIMNMIQVYGKPIRVKKASQDKKTL--------DIGANLFIGNLD 812
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + +E +++R P + +G ++ F EA++L I+ N +
Sbjct: 813 PEVDEKLLYDTFSAFGGI---IETPKIMRDPDTKHSRGFGFISFDAFEASDLAIECMNAQ 869
Query: 406 -LRDRELRLSHA 416
L +R++ + +A
Sbjct: 870 YLCNRQIVVQYA 881
>gi|388857361|emb|CCF49035.1| uncharacterized protein [Ustilago hordei]
Length = 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R DR+ PPR++L D P + T FVGNL FDV + ++ + F + + + +VR++
Sbjct: 65 RSDRSYPPREELPLPDKPPF----TAFVGNLSFDVMEADVQEFF-----VPAKIVSVRIV 115
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
P + KG YV F+T++ + R +L R +R+S A+
Sbjct: 116 TGPDGKP-KGFGYVEFQTQDDLKTALDRSGGQLASRTVRISVAE 158
>gi|384253943|gb|EIE27417.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 296
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 41/214 (19%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G R +FVG +P ++ ++ + GEI+S+ + P DT R I
Sbjct: 102 GSTERRVFVGGMPFGYEESDVLDYWSYCGEIESLDLMRFP--DTG--RFKGI-------- 149
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD---RACPPRKKLKGE---------- 328
A+I FK+E +AAL + I I+++ A P RKK + E
Sbjct: 150 -----AFITFKTEGGYKAALECDGMTIDTVQIKVEPCISAGPKRKKQRNEVVSQTNRKAH 204
Query: 329 --DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGI 384
AP + +VGN+ F+ + ++ +L G E +V RH G KG
Sbjct: 205 SGAAPKVEGYNVAYVGNIAFEAGESDLRELLAG-------CEITKVRRHTDKDTGKFKGY 257
Query: 385 AYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQ 418
A+V F E+ + ++ L+ R +R+ +AQ+
Sbjct: 258 AHVHFADEESLDRAMEFDGAALKGRRIRVGYAQE 291
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 99/208 (47%), Gaps = 37/208 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL ++ ++ + + F + G P+++ +P K NA +
Sbjct: 32 TVYVGNLDVQTTEELVWELFTQAG----------PVVNVYMP-------KDRVTNAHQGY 74
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK E+ + A+ NM + G IR+++A +++ D+ +F+GNL
Sbjct: 75 GFVEFKGEEDADYAIKVLNMVKVYGKAIRVNKASQDKRQA--------DVGANLFIGNLD 126
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + V +++R P +G +V + EA++ I+ N +
Sbjct: 127 PDVDEKLLYDTFSAFGVI---VNTPKIMRDPDTGNSRGFGFVSYDCFEASDAAIEAMNGQ 183
Query: 406 -LRDRELRLSHA-------QQNCTPSKR 425
L +R + +S+A +++ TP++R
Sbjct: 184 YLCNRAITVSYAFKKDTKGERHGTPAER 211
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 224 LLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR---KGAILQKQINE 280
L R++FV LP + + F G I+++ K+PR G I+
Sbjct: 22 LKRSVFVSGLPYSADTDAIKEYFQNCGTIENI----------KLPRYQDTGKIIG----- 66
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVF 340
+ ++VF + + + A+ N V+ G ++ + A +K D + T+F
Sbjct: 67 -----YCHLVFSTPEEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAPEDCTTIF 121
Query: 341 VGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
V NL FD ++E+ + F CG V VR + H + KG A++ FK + N
Sbjct: 122 VKNLAFDCTEDEVGEFFEKCG------KVVNVRFVYHYSQKHFKGFAFIEFKMNSSVNAA 175
Query: 399 IKRRNLKLRDRELRLSH 415
+K + + R+L + +
Sbjct: 176 LKLNGTEFKGRKLTIDY 192
>gi|159479546|ref|XP_001697851.1| hypothetical protein CHLREDRAFT_193055 [Chlamydomonas reinhardtii]
gi|158273949|gb|EDO99734.1| predicted protein [Chlamydomonas reinhardtii]
Length = 561
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 60/145 (41%), Gaps = 47/145 (32%)
Query: 246 FIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQIN-ENADSVHAYIVFKSEQSTEAALAF 303
F FG I+SVR+R+VP+ +D +PR+ AIL ++ E AY+VFK E S AAL
Sbjct: 396 FASFGTIESVRMRAVPVKVDAAMPRRSAILSGAVDTERGLPCTAYVVFKEEVSARAALTA 455
Query: 304 NMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN-- 361
NM DE++ G
Sbjct: 456 NM-----------------------------------------QTSDEDLIGFVLGKAAD 474
Query: 362 --DLESSVEAVRVIRHPHMRVGKGI 384
+L SVEAVRV+R VGKGI
Sbjct: 475 HPELADSVEAVRVVRDRATNVGKGI 499
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q +
Sbjct: 14 TVYVGGLDEKVSEALLWELFLQAG----------PVVNTHMPKDRVTQAHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFMSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITISYA 177
>gi|392591832|gb|EIW81159.1| hypothetical protein CONPUDRAFT_55890 [Coniophora puteana
RWD-64-598 SS2]
Length = 461
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 113/308 (36%), Gaps = 111/308 (36%)
Query: 226 RTIFVGNLPLKVKKKTLIKE--------FIKFGEIDSVRIRSVP--IIDTKIP------- 268
RTIFVGNLP V +K +++ + +I+S R RSV + +K+P
Sbjct: 51 RTIFVGNLPKDVAQKRPLQKQLHKHILSLVPTAKIESSRFRSVAFQVPTSKLPDDSAKPT 110
Query: 269 -------------------------------------RKGAILQKQINENADSVHAYIVF 291
+K A + +Q + ADSV+AYIVF
Sbjct: 111 PTKARQHDKDRAASWRTSSGKDDEKADEKKFLTPAQKKKIAFINQQFHPIADSVNAYIVF 170
Query: 292 KS---------------------EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+ + A N + IR+D A P DA
Sbjct: 171 AHPIPASSRPSNLPPLPPVLEPYKAARVAVEKCNGTIFMERMIRVDAAAP-----LSSDA 225
Query: 331 PL--------YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS---------------V 367
L D + T+FVGNL F+ K++++ F GL E V
Sbjct: 226 SLDKSHATGAGDPRLTIFVGNLDFESKEDDLRVFFEGLVSSERGPPPSETAADSNAGQWV 285
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQNC--TPS 423
VR++R ++GKG AYV F R + L + LK R+LR+ Q C P+
Sbjct: 286 NRVRIVRDGQTQLGKGFAYVQFADRVCVDEILAMDVSRLKFAKRKLRV----QRCKTAPA 341
Query: 424 KRKDVAPA 431
APA
Sbjct: 342 ASPRDAPA 349
>gi|449516393|ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
Length = 678
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKTR 392
D+K+TV++GNLPFD+ +EE+ Q F G ++ S V + +V + P KG ++ FKT
Sbjct: 224 DLKRTVYIGNLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRP-----KGTGFLKFKTA 278
Query: 393 EAANLVIKRRN------LKLRDRELRLSHA 416
+AAN+ + N + L+ R+L++ +A
Sbjct: 279 DAANVAVSSANAASGVGIFLKGRQLKVLNA 308
>gi|403371683|gb|EJY85724.1| RNA binding motif protein 34 [Oxytricha trifallax]
Length = 337
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 43/205 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +++ N P V++K + K F + GEI+ + +R +P D++ +KQ
Sbjct: 28 RIVYLENFPSNVEEKNIKKAFRENGEIEKIWLRVMPEKDSQ--------KKQ-------- 71
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLD------RACPPRKKL-----KGEDAPLYD 334
AY++FK+++ A N+A + H ++D ++ RK L K +D L D
Sbjct: 72 -AYLLFKNKED-----ALNVATLIMKH-KIDGSDLEAKSNKVRKNLATEGDKSQDISLND 124
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ T+F+ N+ + ++E+ F CG V ++ +++ ++ +GIAYV F ++
Sbjct: 125 YETTIFIRNVHPRLSEDELKTHFQECG------HVVSINLVKDKTNQLNQGIAYVRFASK 178
Query: 393 EAANLVIKRRN-LKLRDRELRLSHA 416
+ N IK +N KL++R L++ A
Sbjct: 179 DEMNNAIKLKNKTKLKERHLKVMRA 203
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKTR 392
D+K+TV++GNLPFD+ +EE+ Q F G ++ S V + +V + P KG ++ FKT
Sbjct: 512 DLKRTVYIGNLPFDIDNEEVKQRFSGFGEVLSFVPVLHQVTKRP-----KGTGFLKFKTA 566
Query: 393 EAANLVIKRRN------LKLRDRELRLSHA 416
+AAN+ + N + L+ R+L++ +A
Sbjct: 567 DAANVAVSSANAASGVGIFLKGRQLKVLNA 596
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 74/190 (38%), Gaps = 36/190 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F G+L V L + F FG I S R+ + D R
Sbjct: 204 TLFAGSLSWGVDDNALYEAFKSFGNIVSARV----VTDKNTGRSRGF------------- 246
Query: 287 AYIVF-KSEQSTEAALAFNMAVIGGNHIRLDRA------------CPPRKKLKGEDAPLY 333
Y+ F SE +T+A A I G + LD A R K G+ L
Sbjct: 247 GYVDFGDSESATKAYEAMQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGD--TLS 304
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
T+FVGNLPFD + + + Q F + + V +VR+ P KG YV F + E
Sbjct: 305 AESDTLFVGNLPFDTEQDTVRQFFSEV----AEVASVRLPTDPDSGNLKGFGYVTFNSIE 360
Query: 394 AANLVIKRRN 403
A + +N
Sbjct: 361 DAKSALDAKN 370
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ + Q +
Sbjct: 14 TIYVGGLDDKVTESLLWELFVQSG----------PLVNVHMPKDRVTMMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINFASFEASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|393238200|gb|EJD45738.1| hypothetical protein AURDEDRAFT_137120 [Auricularia delicata
TFB-10046 SS5]
Length = 587
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 40/182 (21%)
Query: 269 RKGAILQKQINENADSVHAYIVFK-----SEQSTEAA-LAFNMAVIGGN-------HIRL 315
+K A + K+ + +AD+ +AY VF SE T A A + V G+ IR+
Sbjct: 275 KKIAFIHKEFHSDADTTNAYAVFAYPKPDSEGVTLAPDEAARLCVEKGDGSTFMERTIRV 334
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESS--------- 366
DR G + D ++++FVGNL F K+E++ F L E
Sbjct: 335 DRVG------AGVASAKTDARRSIFVGNLDFAAKEEDLRVFFESLLTTERGAPSAPEGQE 388
Query: 367 ------VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQ 418
V VR++R ++GKG AYV F RE + L + + LK R+LR+ Q
Sbjct: 389 AEQTRWVTHVRLVRDAATQLGKGFAYVEFADRECVDEVLALDQVRLKFAKRKLRV----Q 444
Query: 419 NC 420
C
Sbjct: 445 KC 446
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 41/231 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E K E EG + +F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 255 KKRKADEEPAATAKKSKTEEVP-EGAVA-NLFIGNLSWNVDEEWLQREFSEFGELSGVRI 312
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D + R Y+ + S A+ + G I LD
Sbjct: 313 ----VTDRETGRSRGF-------------GYVEYNSAADAAKAMEAKKGTDLDGRTINLD 355
Query: 317 RACPPRKKLKGED-------------APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
A P + +G D +P D T+FVGNLPF ++ ++++F
Sbjct: 356 YAAPRQANTQGADRSQDRARSYGDQTSPESD---TLFVGNLPFSATEDALHEVFGA---- 408
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRL 413
+ SV +R+ KG YV F + + A N +L R +RL
Sbjct: 409 QGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRL 459
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL KV + L + F++ G P+++ +P K I Q A +
Sbjct: 14 TIYVGNLDEKVSETLLWELFLQAG----------PVVNVHMP-KDRITQ------AHQGY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F E + A+ NM + G IR+++A K L D+ VF+GNL
Sbjct: 57 GFIEFLGEDDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++++Y F + ++ +++R P KG A++ F + +A++ ++ N +
Sbjct: 109 PEVDEKQLYDTFSAFGVI---LQTPKIMRDPETGQSKGFAFINFASFDASDAAMEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 FLCNRTINVSYA 177
>gi|156600447|gb|ABU86408.1| cleavage stimulation factor, partial [Clonorchis sinensis]
Length = 260
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 32/173 (18%)
Query: 287 AYIVFKSEQSTEAALAFNMAVI---------------GGNHIRLDRACPPRKKLKGEDAP 331
AY+V S A L+ N + G HIR+DRA R P
Sbjct: 10 AYVVLTSTAGIPAGLSLNGHWLQTKPISTDTPTDYQSSGKHIRVDRALRHR--------P 61
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ K++VF+GNLPFDV++EE+ + + VR+IR KG +V +
Sbjct: 62 VEQFKQSVFLGNLPFDVQEEEVRSAMSKFGPIAN----VRLIRDKETGAVKGFGFVQYTD 117
Query: 392 REAANLVIK-RRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDS 443
A +L I+ ++ +R R +R+ + S R + P + PK +L S
Sbjct: 118 PAAISLAIRSSESVSVRGRPIRI-QEWKAAAKSGRAEWKPKL---PKTVLLHS 166
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL ++ + L++ F++ G P++ IP+ N
Sbjct: 26 TIYVGNLSPQLSEDLLLELFVQAG----------PVVSVFIPKDKVT-------NLQQTF 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ + A+ +NM + G IR+ +A +K L D+ +F+GNL
Sbjct: 69 GFVQFRNEEDADYAIKVYNMIKLYGEPIRVKKASQDKKSL--------DVGANLFIGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + + +++R P +G ++ + + EA++ I+ + +
Sbjct: 121 PDVDEKMLYDTFSAFGMV---ADHPKIMRDPDTGNPRGFGFISYDSFEASDAAIEAMSGQ 177
Query: 406 -LRDRELRLSHAQQNCTPSKR 425
L R++ +S+A + T +R
Sbjct: 178 YLSSRQITVSYAYKKDTKGER 198
>gi|339248069|ref|XP_003375668.1| RNA-binding protein 34 [Trichinella spiralis]
gi|316970928|gb|EFV54781.1| RNA-binding protein 34 [Trichinella spiralis]
Length = 217
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 12/84 (14%)
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
YD K+ VF+GNL FD+ +EEIY F CG ++ +RV+R PH +GKG + +
Sbjct: 80 YDKKRAVFLGNLAFDIGEEEIYTHFTDCG------EIDRIRVVRDPHNYIGKGFGFESY- 132
Query: 391 TREAANLVIKRRNLKLRDRELRLS 414
+ L +K + L++R++R++
Sbjct: 133 ---SVGLALKLNDSLLKNRKIRVT 153
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
++IFVG L V L +EF + GE+ S R+ Q N
Sbjct: 297 KSIFVGRLSWNVDNDWLAQEFAECGEVISARV-----------------QMDRNTGKSRG 339
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR--------ACPPRKKLKGEDAPLYDIKK 337
Y+ F + ++ EAAL N I G + +D+ A R + G+ A +
Sbjct: 340 FGYVEFATTEAVEAALLLNGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDSAS--EPSA 397
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKTREA 394
+FVGNL +D +++++++F D++S +R P R G KG YV F E
Sbjct: 398 VLFVGNLSWDCTEDQVWEVFGEHGDVKS-------VRLPTDRETGRPKGFGYVEFTDIET 450
Query: 395 ANLVIKR-RNLKLRDRELRLSHAQ 417
A + ++ R +RL ++Q
Sbjct: 451 AKKAFEGLSGTEVAGRPIRLDYSQ 474
>gi|449296413|gb|EMC92433.1| hypothetical protein BAUCODRAFT_151826 [Baudoinia compniacensis
UAMH 10762]
Length = 465
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNLP K++L +EF+K E + R + + P A + + A
Sbjct: 106 IWIGNLPWSATKESL-REFLK--EQGGIEGREITRVHMPAPNAPAAGDVGVARAKNKGFA 162
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKGE---DAPLYDIKK 337
Y+ F SE S AL + ++ G + + R K+++GE D + + +
Sbjct: 163 YVDFLSEGSLSKALGASEKLMAGRRVLVKNAKSFEGRPDSKPKQVEGEGARDGKVKEPAR 222
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
VFVGNL FDV E++ + F L VE + + KG A+V FK +AA
Sbjct: 223 RVFVGNLGFDVTKEDLAEHFS----LAGEVEDIHMATFEDSGKCKGFAWVRFKEVDAAEA 278
Query: 398 VIK 400
++
Sbjct: 279 AVR 281
>gi|302688687|ref|XP_003034023.1| hypothetical protein SCHCODRAFT_52873 [Schizophyllum commune H4-8]
gi|300107718|gb|EFI99120.1| hypothetical protein SCHCODRAFT_52873 [Schizophyllum commune H4-8]
Length = 626
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 106/296 (35%), Gaps = 105/296 (35%)
Query: 226 RTIFVGNLPLKVK-KKTLIKEF-------IKFGEIDSVRIRSVPIIDTKIPRKGA----- 272
RT+FVGN+P++V KK LIK + +S+R RSVP+ I + A
Sbjct: 177 RTLFVGNVPVEVMGKKPLIKSLQRHLLSAVPNARAESIRFRSVPVPRDAIAKAAAKGRQD 236
Query: 273 ------------------------------------------ILQKQINENADSVHAYIV 290
+ + E A+SV AY+V
Sbjct: 237 VRSSTNHANTRTSAWRANQNDDDDATALAKTYLTPAEKKRIAAITGDLGEKANSVTAYLV 296
Query: 291 F-------------KSEQSTEAALAFNMAVIG----GNHIRLDRACPPRKKLKGED---- 329
+ +AA+ + G G +R+D A E
Sbjct: 297 LAHPAPRPANLPPLPTADPYQAAIQIAAKMDGVEWEGRALRVDLARRDPATTIAETPVDL 356
Query: 330 -APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA------------------- 369
A L D K+T+FVGNL + K++++ F ND E EA
Sbjct: 357 TALLPDPKRTLFVGNLDYGAKEDDVRAFFEAENDEEEGSEAGSDAEETETPAKPSSTTHH 416
Query: 370 ---VRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRLSHAQQNC 420
VR++R VGKG AYV F R + L + +LK R+LR+ Q C
Sbjct: 417 VSRVRIVRDSSTGVGKGFAYVQFVDRTPVDELLALPAGSLKFAKRKLRV----QKC 468
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 32/197 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++V +P K + ++ F G + VR+ D+ PR +
Sbjct: 63 TVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQ--DSGKPRG---------------Y 105
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-----KLKGEDAPLYDIK--KTV 339
A++VF E + E AL + + ++ + RA PR K K ++A +K +TV
Sbjct: 106 AHVVFDDEAALEKALELDGQYLFNRYLSIRRAEAPRAVEMALKEKTQNATKKAVKGCRTV 165
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
++ LP++V+++ I Q CG ++ +VR+ H + KG YV F + + A
Sbjct: 166 YIKQLPYEVEEDTIRQALASCG------TITSVRLPIWNHTKKLKGFGYVEFSSEDEALA 219
Query: 398 VIKRRNLKLRDRELRLS 414
+R +K+ DR + +S
Sbjct: 220 AARRSGMKIGDRMVLIS 236
>gi|159480766|ref|XP_001698453.1| hypothetical protein CHLREDRAFT_187814 [Chlamydomonas reinhardtii]
gi|158282193|gb|EDP07946.1| predicted protein [Chlamydomonas reinhardtii]
Length = 434
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
A+I FK+++ EAALA N ++ G +R+++ C +LKG A V+VGN+ F
Sbjct: 203 AFITFKTQEGYEAALACNGEMLEGRPLRVEK-CKAAAELKGNVAGY----PVVYVGNVSF 257
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+V + E+ +LF +E S VR+ + + R KG A+V F + + + L+
Sbjct: 258 EVGEPELRKLFKERAGVEPS--EVRLHKDKNGRP-KGFAHVHFANDDDVDKAVALNGLEF 314
Query: 407 RDRELRLSHAQ 417
DR +R+S+AQ
Sbjct: 315 EDRNIRISYAQ 325
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 41/214 (19%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
V ++KA+ E + K + D+ +TIFVG L V L EF + GE+ S
Sbjct: 278 VANGKRKAEGEAAKPVKKVKVDEAADDSASTKTIFVGKLSWNVDNDWLESEFAECGEVVS 337
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
R+ Q N ++ F S ++ + AL N I G I
Sbjct: 338 ARV-----------------QMDRNTGKSRGFGFVTFASPEAVDKALELNGKEIDGRPIN 380
Query: 315 LDRACPP--------RKKLKGE--DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
+D++ R K G+ AP +FVGNL FD +++++++F
Sbjct: 381 IDKSVEKDQNQVRERRAKAFGDATSAP----SSVLFVGNLSFDATEDQLWEVF------- 429
Query: 365 SSVEAVRVIRHPHMRVG---KGIAYVLFKTREAA 395
S +V+ +R P R KG YV F+ E+A
Sbjct: 430 SDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESA 463
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 28/198 (14%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+ TIFVG L V L EF + GE+ S R+ Q N
Sbjct: 299 VTTIFVGRLSWNVDNDWLKSEFEECGEVVSARV-----------------QMDRNTGKSR 341
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYDIKK-----T 338
Y+ F S + EAAL I G I +D++ K K++ A + +K T
Sbjct: 342 GFGYVEFTSPDAVEAALKLTGKEIDGRPINVDKSTGVSKDKVRDSRAKAFGDQKSEPSST 401
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+FVGNL F ++ +++ F D V+ VR+ KG AYV F E+A
Sbjct: 402 LFVGNLSFSASEDVLWEAFASYGD----VKGVRMPTDRETGQPKGFAYVDFTDIESAKKA 457
Query: 399 IKR-RNLKLRDRELRLSH 415
+ + R +RL +
Sbjct: 458 HDEGAGMDIAGRAVRLDY 475
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYVGGLDDKVTETLLWELFVQSG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKSL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 LEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 43/234 (18%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ ET K E D +FVGNL V + L EF FGE+ VRI
Sbjct: 269 KKRKAEEETSATPKKSKTE--DPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI 326
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ DT R + E ++V A F++++ E I G I LD
Sbjct: 327 MTE--RDTGRSRGFGYV-----EYTNAVDAAKAFEAKKGAE---------IDGRVINLDY 370
Query: 318 AC--PPRKKLKG---------------EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL 360
A P K +G + +P D T+FVGNLPFD ++ + +LF
Sbjct: 371 ATGRPANKDQQGGFKDRANARARSFGDQASPESD---TLFVGNLPFDANEDSVGELFG-- 425
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRL 413
+ S+ +R+ P KG YV + + + A + L R +RL
Sbjct: 426 --EKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRL 477
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684102|gb|EDQ70507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL +V ++ L + F++ G P+++ +P+ N +
Sbjct: 26 TAYVGNLDSQVSEELLWELFVQAG----------PVVNVYVPKDRVT-------NLHQGY 68
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F+SE + A+ NM + G IR+++A +K L D+ +FVGNL
Sbjct: 69 GFIEFRSEDDADYAIKILNMIKLYGKPIRVNKASQDKKSL--------DVGANLFVGNLD 120
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ +Y F + V +++R P +G ++ + + EA++ I+ N +
Sbjct: 121 PDVDEKLLYDTFSAFGVI---VTNPKIMRDPDSGNSRGFGFISYDSFEASDSAIEAMNGQ 177
Query: 406 -LRDRELRLSHAQQNCTPSKR 425
L +R + +S+A + T +R
Sbjct: 178 YLCNRAITVSYAYKKDTKGER 198
>gi|301097256|ref|XP_002897723.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
gi|262106744|gb|EEY64796.1| splicing factor 3B subunit 4 [Phytophthora infestans T30-4]
Length = 188
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + ++ G + +V + PR A +
Sbjct: 13 TVYVGNLDDRVTEELLWELMLQSGSVCNVHM----------PRDKV-------TGAHQNY 55
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E E A+ NM + G IR+ +A RK L D+ +F+GNL
Sbjct: 56 GFVEFRTEDCAEYAVKVLNMIQLYGRVIRVKKASNDRKNL--------DVGANLFIGNLD 107
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+V ++ +Y F + VE +++R P + KG +V F + EAA+L I+
Sbjct: 108 PEVDEKLLYDTFSAFGGI---VETPKIMRDPDTKASKGFGFVSFDSFEAADLAIE 159
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L K + L + F++ G P+++ +P+ +Q Q +
Sbjct: 14 TIYVGGLDEKTTESILWELFLQAG----------PVVNVHMPKDRITMQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L DI +F+GNL
Sbjct: 57 GFVEFMTEEDADYAMRIMNMIKLFGKPIRVNKASANQKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFASFEASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRAITISYA 177
>gi|406696396|gb|EKC99686.1| RNA-binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 621
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 33/188 (17%)
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA------------ 300
D V +S +D K RK A ++K +E+A + +AY+VF+ + A
Sbjct: 302 DDVVDKSKSFLDAKGKRKVAFIKKDFHESAAACNAYLVFEHARPDRPANLPPLMNPFDAA 361
Query: 301 ---LAFNMAVIGGNHIRLDRACPPRKKLKGE--------DAPL---YDIKKTVFVGNLPF 346
LA N GN +R+D P DA L D K VFVG L +
Sbjct: 362 AAALAANGTEFMGNTLRVDTMRSPAAAALSSASTSLSKRDAWLPSGTDPKSCVFVGGLDY 421
Query: 347 DVKDEEIYQLFCGLNDLE-------SSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
K+E++ F L E + V +VR+IR ++GKG YV F RE+ + VI
Sbjct: 422 AAKEEDVRAFFEALVVSERGAPSEGTYVTSVRLIRDRDTQLGKGFGYVHFVDRESVDEVI 481
Query: 400 KRRNLKLR 407
+ KL+
Sbjct: 482 ALPSTKLK 489
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 96/234 (41%), Gaps = 43/234 (18%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ ET K E D +FVGNL V + L EF FGE+ VRI
Sbjct: 261 KKRKAEEETSATPKKSKTE--DPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI 318
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ DT R + E ++V A F++++ E I G I LD
Sbjct: 319 MTE--RDTGRSRGFGYV-----EYTNAVDAAKAFEAKKGAE---------IDGRVINLDY 362
Query: 318 AC--PPRKKLKG---------------EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGL 360
A P K +G + +P D T+FVGNLPFD ++ + +LF
Sbjct: 363 ATGRPANKDQQGGFKDRANARARSFGDQASPESD---TLFVGNLPFDANEDSVGELFG-- 417
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRL 413
+ S+ +R+ P KG YV + + + A + L R +RL
Sbjct: 418 --EKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRL 469
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E+++ +K + EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 223 QKRKAEDE-EEVVAPKKTKVEPTEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 278
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + D+V A+ K + L + A N DR
Sbjct: 279 ----VTDRDTGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDR 334
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 335 AQSRAQNFGDQRSPESD---TLFIGNIAFSADENMISETFAEYG----SILGVRLPTDPE 387
Query: 378 MRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRL--SHAQQNC 420
KG YV F + + A + N +L R +RL S +QN
Sbjct: 388 SGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQNS 433
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|325183203|emb|CCA17661.1| nucleolin putative [Albugo laibachii Nc14]
Length = 701
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 16/134 (11%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
A I F EAAL + + GG +++ +L E + T FVGNLP+
Sbjct: 479 ARIRFSCASEAEAALELDGSDFGGRWLKI--------QLANEILEKPENCTTAFVGNLPW 530
Query: 347 DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
D D + + F CG + R++ +GI YV F + EAA+ IK
Sbjct: 531 DADDNSVCEFFSQCG------EIGECRLLSDRETGEFRGIGYVEFTSTEAADEAIKLNGA 584
Query: 405 KLRDRELRLSHAQQ 418
R LR+++A+Q
Sbjct: 585 DFNGRSLRINYAKQ 598
>gi|401888380|gb|EJT52338.1| RNA-binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 621
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 39/203 (19%)
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA------------ 300
D V +S +D K RK A ++K +E+A + +AY+VF+ + A
Sbjct: 302 DDVVDKSKSFLDAKGKRKVAFIKKDFHESAAACNAYLVFEHARPDRPANLPPLMNPYDAA 361
Query: 301 ---LAFNMAVIGGNHIRLDRACPPRKKLKGE--------DAPL---YDIKKTVFVGNLPF 346
LA N GN +R+D P DA L D K VFVG L +
Sbjct: 362 AAALAANGTEFMGNTLRVDTMRSPAAAALSSASTSLSKRDAWLPSGTDPKSCVFVGGLDY 421
Query: 347 DVKDEEIYQLFCGLNDLE-------SSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
K+E++ F L E + V +VR+IR ++GKG YV F RE+ + VI
Sbjct: 422 AAKEEDVRAFFEALVVSERGAPSEGTYVTSVRLIRDRDTQLGKGFGYVHFVDRESVDEVI 481
Query: 400 K--RRNLKLRDRELRLSHAQQNC 420
LK R +R+ Q C
Sbjct: 482 ALPSSKLKFAKRPIRV----QQC 500
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+GNL V ++ L EF +FGE+ VRI + D R + D+V A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRI----VTDRDSGRSKGFGYVEFTNAEDAVKA 288
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+ K + L + A N DRA + + +P D T+F+GN+ F
Sbjct: 289 HAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQKSPESD---TLFIGNIAFS 345
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKL 406
+ I + F S+ VR+ P KG YV F + + A + N +L
Sbjct: 346 ADESMISETFAEYG----SILGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSEL 401
Query: 407 RDRELRL--SHAQQNC 420
R +RL S +QN
Sbjct: 402 AGRAMRLDFSTPRQNS 417
>gi|225561868|gb|EEH10148.1| nucleolar protein [Ajellomyces capsulatus G186AR]
Length = 617
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 72/268 (26%)
Query: 223 KLLRTIFVGNLPL-----KVKKKTLIKEFIKF----------GEIDSVRIRSVPIIDTKI 267
K RTIF+ N+ K KKTL+K F +I+S+R RS +
Sbjct: 218 KSARTIFLSNVSTEAIKSKSAKKTLLKHLCSFFPSLPESATPHKIESIRFRSTAFSTQSM 277
Query: 268 PRKGAILQKQINENAD-SVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL---------- 315
P++ A ++++ ++ S +AY+V+ + + A A N +VI H+R+
Sbjct: 278 PKRAAYAKRELMDSTTRSTNAYVVYSTTAAARGAPKALNGSVILDRHLRVDSVAHPAPID 337
Query: 316 -------------DRACPPRKKLKGE----------DAPLYDIKKTVF------------ 340
D P +++ G+ AP D+++ ++
Sbjct: 338 YKRCIFVGNLGFVDEETPTDEQVAGQQKEKKKRKQKHAPPADVEEGLWRTFNEHTRASIA 397
Query: 341 ------VGNLPFDVKDEEIYQLFCGLNDLESS-VEAVRVIRHPHMRVGKGIAYVLFKTRE 393
D + +I + DL VE+VRVIR P R+GKG+AYV F+
Sbjct: 398 KPSKPTAAGKSADPSNNKISKDTGPRPDLGGGPVESVRVIRDPATRIGKGVAYVQFRDEN 457
Query: 394 AANLVIKRRNLK---LRDRELRLSHAQQ 418
A + + K L R+LR++ A++
Sbjct: 458 AVEMALLLDGQKFPPLLPRKLRVTRAKR 485
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 54/235 (22%)
Query: 162 KKTKKRKR---DDVEKDYVEKKYGVIAKEEEGKKVGVGEKRKKADNETEDM--------- 209
+K +KRKR +D+E+ Y+ + AKE+E ++ +++K ++ +
Sbjct: 131 EKRRKRKRGGAEDIEESYMRRIAKEEAKEDEKRRSEKAKRQKIVESVGRESDSSDSESDN 190
Query: 210 -----------LVHRKEEGFDDEGKL---LRTIFVGNLPL-----KVKKKTLIKEFIKF- 249
+VH D L RTIF+ N+ K KKTL+K F
Sbjct: 191 EEDEDGIDNPPIVHESNSSKPDAALLDKSARTIFLSNVSTEAIKSKSAKKTLLKHLCSFF 250
Query: 250 ---------GEIDSVRIRSVPIIDTKIPRKGAILQKQI-NENADSVHAYIVFKSEQSTEA 299
+I+S+R RS +P++ A ++++ + S +AY+V+ + +
Sbjct: 251 PSLPESATPHKIESIRFRSTAFSTQSMPKRAAYAKRELMDSTTRSTNAYVVYSTTAAARG 310
Query: 300 AL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEI 353
A A N +VI H+R+D P AP+ D K+ +FVGNL F DEE
Sbjct: 311 APKALNGSVILDRHLRVDSVAHP--------API-DYKRCIFVGNLGF--VDEET 354
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 12 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 55 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 107 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 163
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 164 YLCNRPITVSYA 175
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 42/214 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGNLP L F + G +D V+ I+ +I + +
Sbjct: 123 IYVGNLPYTFTAAELTSVFSEAGSVDDVQ----------------IIYDKITDRSRGFAF 166
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPR-------------KKLKGEDAPLYD 334
+ +E++ +A FN A++GG IR++ PR L+ D D
Sbjct: 167 VTMATAEEAAKAVQMFNGALLGGRTIRVNFPEVPRGGERAVASAAAAKTSLRVVD----D 222
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
V+ GNL + V+ + + F G L S RVI +G +V F+T E
Sbjct: 223 GTYKVYAGNLGWGVRADALKTAFEGQPGLLGS----RVIFERDTGRSRGFGFVSFQTLED 278
Query: 395 ANLVIKRRN-LKLRDRELRLSHAQQN----CTPS 423
AN I+ + ++L R LRLS A QN TPS
Sbjct: 279 ANAAIQAMDGVELDGRPLRLSLASQNPPAGSTPS 312
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 8 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 50
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 51 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 102
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 103 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 159
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 160 YLCNRPITVSYA 171
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF +FGE+ VRI + DT R + E ++V A
Sbjct: 282 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 334
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG--------------EDAP 331
F++++ TE I G I LD A P ++ G + +P
Sbjct: 335 AKAFEAKRDTE---------IDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASP 385
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D T+FVGN+PF ++ ++++F + S+ +R+ P KG YV F +
Sbjct: 386 ESD---TLFVGNIPFSANEDSLHEVFG----QKGSILGIRLPTDPESGRPKGFGYVQFSS 438
Query: 392 REAANLVIKRRN-LKLRDRELRL 413
E A N ++ R +RL
Sbjct: 439 VEEAREAFNELNGAEIDGRPVRL 461
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L EF GE+ S RI ++D R
Sbjct: 205 TVFVGGLSWNIDNDWLASEFASCGEVVSARI----VLDRDTQRSRGF------------- 247
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-----TVFV 341
Y+ F S A+ F + G +R++ A RK + A +++ K+ T+++
Sbjct: 248 GYVEFADVDSAIKAIEFEGKELDGRAVRVNFAN-ARKPDADKRAKVFNDKRSPPADTLWI 306
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
G+LPFD ++ IY+ F D++S VR+ KG YV F A ++
Sbjct: 307 GSLPFDTTEDHIYETFGEYGDVQS----VRLPTDRETGAAKGFGYVTFGDVAQATAALEA 362
Query: 402 RN-LKLRDRELRLSHA 416
N + R +R+ A
Sbjct: 363 LNGSEFGSRRIRIDFA 378
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|240275573|gb|EER39087.1| nucleic acid-binding protein [Ajellomyces capsulatus H143]
Length = 332
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 34/174 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 125 TIYVGNLFFEVTAEDLKRDMAKFGTIYSVRI----VYDSRGMSRG--------------F 166
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD----RACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S ++ EAA++ NM++ G I ++ + PR + + KT+F+
Sbjct: 167 AYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAAPRTRAS-------EPTKTLFI 219
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
GNL F++ D E+ LF + + V+ VRV +G A+ F E+A
Sbjct: 220 GNLSFEMTDRELNDLFRDIPN----VDDVRVSVDKRTGRPRGFAHADFLDVESA 269
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 34/215 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + + F GEI VR S + N
Sbjct: 877 TVFVTNFPPTADENYIRELFHSCGEIAEVRFPS------------------LKYNTHRRF 918
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F S AA N +GGN + + P ++ A Y+ + ++V NLP+
Sbjct: 919 CYVQFTSSSDAYAATGLNEKDLGGNLRLVVKISDPSQRQVRSGA--YEEGREIYVCNLPY 976
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAAN--LVIKRR 402
+ ++ +LF D+ES +R P G +G A+V F T++ +N L + +
Sbjct: 977 KTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFAFVTFATKDQSNAALAMNEK 1029
Query: 403 NLKLRDRELRLSH---AQQNCTPSKRKDVAPAVNS 434
K R+ +RLS A+++ T + +PA N+
Sbjct: 1030 TFKGRELNVRLSTNTGAKRHQTTVVSRSESPATNA 1064
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ + + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 44/236 (18%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E E+ K E G L FVGNL V ++ L +EF +FG I +VR+
Sbjct: 229 KKRKAEAEPEETSKKTKTEDPAATGNL----FVGNLSWNVDEEWLTREFEEFGAIKAVRV 284
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
I D R KG + Y+ F+S AL A + + +R+
Sbjct: 285 ----ITDRDSGRSKG--------------YGYVEFESADDAAKALEARHGYTLDNRELRV 326
Query: 316 DRACPPRKKLKGE--------------DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLN 361
D P ++ G+ D P T+FVGN+ FD + + ++F
Sbjct: 327 DLGTPRAQRNDGQTPQQRSNDRQKQYGDTP-SQPSATLFVGNISFDATQDMVTEVFQEYG 385
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSHA 416
S+ AVR+ KG YV F + E A ++ + + R +RL ++
Sbjct: 386 ----SINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENLTGVDIAGRPIRLDYS 437
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 18/226 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E+++ +K + EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 223 QKRKAEDE-EEVVAPKKTKVEPTEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 278
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + D+V A+ K + L + A N DR
Sbjct: 279 ----VTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDR 334
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 335 AQSRAQNFGDQRSPESD---TLFIGNIAFSADENMISETFAEYG----SILGVRLPTDPE 387
Query: 378 MRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRL--SHAQQNC 420
KG YV F + + A + N +L R +RL S +QN
Sbjct: 388 SGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQNS 433
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|443717173|gb|ELU08367.1| hypothetical protein CAPTEDRAFT_163289 [Capitella teleta]
Length = 412
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ +I++ A +
Sbjct: 14 TIYVGGLDDKVSESILWELFLQAG----------PVVNVHMPKD------RISQ-AHQGY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIRIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + E ++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINFASFETSDSAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRAISISYA 177
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 31/190 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + F K+GE IID + P + N
Sbjct: 906 TLFVTNFPPTADENYIRDLFSKYGE----------IIDIRFP--------SLKYNTHRRF 947
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ + +ALA + + +G G H+ + + P RK+ + + P+Y+ + + V N+
Sbjct: 948 CYLQFKTSVAAHSALALDGSAVGNGLHLVVKISDPSRKQDR--NGPIYE-GREIHVSNVN 1004
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRN 403
+ ++++ +LF S V ++R P G KG YV+F ++E A +
Sbjct: 1005 WSASEDDLKELF-------SRFGTVELVRLPRKVDGGSKGFGYVVFSSKEEATAALAMHE 1057
Query: 404 LKLRDRELRL 413
+ R R L +
Sbjct: 1058 QEFRGRPLHV 1067
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|449281849|gb|EMC88820.1| Splicing factor 3B subunit 4, partial [Columba livia]
Length = 177
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 3 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 45
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 46 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 97
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 98 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 154
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 155 YLCNRPITVSYA 166
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 21/230 (9%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K +K E++++ V +K + DE +FVGNL V ++ L EF FGE+ VRI
Sbjct: 237 KSQKRKAESDEVPVTKKAKKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRI 296
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMA----VIGGNHI 313
+ D R + D+ A+ K + L + A GG
Sbjct: 297 ----VTDRDSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNAGGAK- 351
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
DR+ K + +P D T+F+GN+ F + I + F ++ +R+
Sbjct: 352 --DRSQARAKSFGDQTSPESD---TLFIGNISFGADENAIQETFSSYG----TISGIRLP 402
Query: 374 RHPHMRVGKGIAYVLFKT-REAANLVIKRRNLKLRDRELRL--SHAQQNC 420
P KG Y+ F + EA + + + + +L R +RL S +QN
Sbjct: 403 TDPESGRPKGFGYIQFSSVDEARSALNELQGSELAGRAMRLDFSTPRQNS 452
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 94/231 (40%), Gaps = 41/231 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E K E EG + +F+GNL V ++ + +EF +FGE+ VRI
Sbjct: 185 KKRKADEEPAATAKKSKTEEVP-EGAVA-NLFIGNLSWNVDEEWVQREFSEFGELSGVRI 242
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D + R Y+ + S A+ + G I LD
Sbjct: 243 ----VTDRETGRSRGF-------------GYVEYNSAADAAKAMEAKKGTDLDGRTINLD 285
Query: 317 RACPPRKKLKGED-------------APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
A P + +G D +P D T+FVGNLPF ++ ++++F
Sbjct: 286 YAAPRQANTQGADRSQDRARSYGDQTSPESD---TLFVGNLPFSATEDALHEVFGA---- 338
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRL 413
+ SV +R+ KG YV F + + A N +L R +RL
Sbjct: 339 QGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRL 389
>gi|340381114|ref|XP_003389066.1| PREDICTED: splicing factor 3B subunit 4-like [Amphimedon
queenslandica]
Length = 364
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ IPR +I + +
Sbjct: 14 TIYVGGLDEKVSESVLWELFLQAG----------PVVNIHIPRD------RITQTHQG-Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E + A+ NM + G IR+++A K L DI +F+GNL
Sbjct: 57 GFVEFMGEDDADYAIKIMNMIKLYGKPIRVNKAASNMKSL--------DIGANLFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y +F + ++A +++R KG A+V F + +A++ I+ N +
Sbjct: 109 PEIDEKMLYDIFSAFGVI---LQAPKIMRDVDSGGSKGFAFVNFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R++ +S+A
Sbjct: 166 YLCNRQVSVSYA 177
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV NL + L K F + G++ VR+ I + G +V+
Sbjct: 170 TIFVSNLASDTDEDQLHKLFSQCGQVADVRL---------IKKFGGKF-------GTNVY 213
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
AY+ F + + T AL + V+ I + +C ++ K Y+ K TVFV N+
Sbjct: 214 AYVEFTTSEPTVEALKLDHTVLNSRAIYVS-SCNADRQNK------YNNKATVFVTNVAH 266
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
D+ + ++ +F ++ V+AVR++R+ R KG AY+ + T +A + +L
Sbjct: 267 DLSERDLEDIFKEVD----QVKAVRLVRNKKGR-SKGFAYIEYDTESSARAAV----FQL 317
Query: 407 RDREL 411
DRE+
Sbjct: 318 NDREM 322
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 45/233 (19%)
Query: 195 VGEKRKKADNETEDMLVHRKEEG----FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFG 250
V +KRK +D + H++E G + K L IF+ LP + + + F G
Sbjct: 215 VSKKRKNSDAGEKSNKAHKQENGDAAAVANPQKTLE-IFIAGLPWSATEDEVKEHFAGCG 273
Query: 251 EIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGG 310
E+ RI + S A++ F + ++ EAALA + GG
Sbjct: 274 EVTGARI-------------------PLQNGRSSGTAFVTFATSEAAEAALAMDGQDFGG 314
Query: 311 NHIRLDRACPPRKKLKGEDAPLYDIK----KTVFVGNLPFDVKDEEIYQLF--CGLNDLE 364
+++ A E ++D K +VF+GNL +DV + + + F CG
Sbjct: 315 RWMKIRTA---------EKKNMFDEKPEGCTSVFIGNLSWDVDENTVRETFGECG----- 360
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
+ + R+ +G +V F + EA + +K + R +R+++A+
Sbjct: 361 -EILSCRLATDRETGEFRGFGHVDFASTEAVDEAVKLAGSYVNGRAIRVNYAK 412
>gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio]
Length = 400
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 AVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 40/206 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF +FGE+ VRI + DT R + E ++V A
Sbjct: 197 LFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 249
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG--------------EDAP 331
F++++ TE I G I LD A P ++ G + +P
Sbjct: 250 AKAFEAKRDTE---------IDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASP 300
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
D T+FVGN+PF ++ ++++F + S+ +R+ P KG YV F +
Sbjct: 301 ESD---TLFVGNIPFSANEDSLHEVFG----QKGSILGIRLPTDPESGRPKGFGYVQFSS 353
Query: 392 REAANLVIKRRN-LKLRDRELRLSHA 416
E A N ++ R +RL +
Sbjct: 354 VEEAREAFNELNGAEIDGRPVRLDFS 379
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E K E +D G + +FVGNL V + L++EF +FGEI R+
Sbjct: 270 KKRKADDEVAAPAKKTKTETAEDTGS--KNLFVGNLSWNVDDEWLMREFEEFGEISGARV 327
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM-AVIGGNHIRL 315
I D + R KG Y+ F S S AAL ++I G +
Sbjct: 328 ----ISDRESGRSKG--------------FGYVEFTSSASAAAALKAKKGSLIDGREANV 369
Query: 316 DRA-----CPPRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D + PP+ + +G A D T+F+GNL FD + + + F +
Sbjct: 370 DFSTPRSDAPPKDRAQGRAAAFGDSTNPPSDTLFLGNLSFDADENTVGEAFG----EHGT 425
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSHA 416
V VR+ KG YV F + + A + ++ R +RL +A
Sbjct: 426 VVNVRLPTDQETGNPKGFGYVTFSSIDDAKTAFEAMTGAEIAGRPVRLDYA 476
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ + + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINYASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|325091401|gb|EGC44711.1| nucleic acid-binding protein [Ajellomyces capsulatus H88]
Length = 359
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 34/174 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 152 TIYVGNLFFEVTAEDLKRDMAKFGTIYSVRI----VYDSRGMSRG--------------F 193
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDR----ACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S ++ EAA++ NM++ G I ++ + PR + + KT+F+
Sbjct: 194 AYVQFDSVEAAEAAISEMNMSIYEGRRIVVNYSTRNSAAPRTRAS-------EPTKTLFI 246
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
GNL F++ D E+ LF + + V+ VRV +G A+ F E+A
Sbjct: 247 GNLSFEMTDRELNDLFRDIPN----VDDVRVSVDKRTGRPRGFAHADFLDVESA 296
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ L Q +
Sbjct: 14 TIYVGGLDEKVTEPLLWELFVQGG----------PVVNVHMPKDRITLLHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F SE + A NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFIEFLSEDDADYACKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPTTGNSKGFAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITISYA 177
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF FGE+ VRI + DT R + E ++V A
Sbjct: 287 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 339
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG---------------EDA 330
F++++ E I G I LD A P K +G + +
Sbjct: 340 AKAFEAKKGAE---------IDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQAS 390
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D T+FVGNLPFD ++ + +LF + S+ +R+ P KG YV +
Sbjct: 391 PESD---TLFVGNLPFDANEDSVGELFG----EKGSILGIRLPTDPDSGRPKGFGYVQYS 443
Query: 391 TREAANLVIKR-RNLKLRDRELRL 413
+ + A + L R +RL
Sbjct: 444 SVDEARAAFNELQGADLLGRPVRL 467
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF FGE+ VRI + DT R + E ++V A
Sbjct: 290 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTE--RDTGRSRGFGYV-----EYTNAVDA 342
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG---------------EDA 330
F++++ E I G I LD A P K +G + +
Sbjct: 343 AKAFEAKKGAE---------IDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQAS 393
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D T+FVGNLPFD ++ + +LF + S+ +R+ P KG YV +
Sbjct: 394 PESD---TLFVGNLPFDANEDSVGELFG----EKGSILGIRLPTDPDSGRPKGFGYVQYS 446
Query: 391 TREAANLVIKR-RNLKLRDRELRL 413
+ + A + L R +RL
Sbjct: 447 SVDEARAAFNELQGADLLGRPVRL 470
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 31/205 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG L + L EF + G + + R++ L +Q +
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQ---------------LDRQSGRS--RGFG 249
Query: 288 YIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP----PRKKLKGEDAPLYDIKKTVFVG 342
Y+ F+S E + +A F I G +R+D + P P K+ K D T+F+G
Sbjct: 250 YVEFESHELAVKAMDQFAGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQRSDPSNTLFIG 309
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK-R 401
NL F+ ++ +++ F SVE+VRV KG YV F + A I
Sbjct: 310 NLSFNTNEDRVWEFFGEFG----SVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDGA 365
Query: 402 RNLKLRDRELRLSHAQQNCTPSKRK 426
+L R +RL TP R+
Sbjct: 366 AGSELDGRVIRLDF----STPKDRQ 386
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E K E D+ L FVGNL V ++ L +EF FGE+ VRI
Sbjct: 201 KKRKAEEEPATNAKKSKTESADNSPNL----FVGNLSWNVDEEWLRREFESFGELSGVRI 256
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ + + R E AD+ A +++++ TE + G I LD
Sbjct: 257 ----MTERETGRSRGF---GYVEYADASSAKAAYEAKKDTE---------LDGRTINLDY 300
Query: 318 ACP-------PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
A P PR+K + D T+FVGNL F V + + ++F G +
Sbjct: 301 AKPRDANSQAPREKAQTRARSFGDQTSPESNTLFVGNLVFGVDENAVREVFEG----QGQ 356
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLKLRDRELRL 413
++ VR+ KG YV F + EA + + + + R +RL
Sbjct: 357 IQGVRLPTDAETGRPKGYGYVEFSSVDEARQALNELQGTDIGGRAIRL 404
>gi|301090291|ref|XP_002895366.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099037|gb|EEY57089.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 263
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG-------A 272
DE K RT+FVGN+ L +K + K F G+++SVR+R +PI + G
Sbjct: 154 DELKERRTVFVGNVSLDATQKDIKKHFSVCGQVESVRLRHLPIAGCAVGDAGNQKLMMKV 213
Query: 273 ILQKQINENA-DSVHAYIVFKSEQSTEAALAFNMAV 307
K+I A D+ +AY+ F E S EAA+ N V
Sbjct: 214 CANKKILTTAKDNCNAYVTFVEESSAEAAIKLNGTV 249
>gi|146166103|ref|XP_001015927.2| hypothetical protein TTHERM_00267920 [Tetrahymena thermophila]
gi|146145323|gb|EAR95682.2| hypothetical protein TTHERM_00267920 [Tetrahymena thermophila
SB210]
Length = 2074
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 198 KRKKADNETEDMLVHRK-----EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
KRK + + TE+ +++K E+ D+ T+F+ NLP + ++ + F I
Sbjct: 595 KRKPSHDITEEEDINKKVKLDQEKTAIDQDGTKPTVFIKNLPSNCTEASISQLFENRDHI 654
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGN 311
++RI + K + K AYI F S E++ A L N A++ G
Sbjct: 655 KAIRI---------VKSKHGGMNKGF--------AYIDFSSMEEANNACLMMNDALVEGQ 697
Query: 312 HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVR 371
+ + + PP+K+ ED+ T ++ NLPF + +EEI Q F + + VR
Sbjct: 698 KLYVAISAPPKKQTGQEDS-------TAYLSNLPFKITEEEIRQAFP-----DHEINQVR 745
Query: 372 VIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+IR + +G AYV FK I++ N
Sbjct: 746 MIRDGNGDF-RGFAYVEFKNETDLQNAIEKFN 776
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|157133023|ref|XP_001662744.1| hypothetical protein AaeL_AAEL012618 [Aedes aegypti]
gi|108870977|gb|EAT35202.1| AAEL012618-PB [Aedes aegypti]
Length = 433
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+IF+GNLP VKK T+ F ++G+I ++R RS I + +K+ + A ++
Sbjct: 304 HSIFIGNLPNTVKKSTMKSLFNQYGKILTIRFRSNDGI--------TLFKKKDRKEAKAL 355
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ YI F+++ +AA A N ++ GN IR+ + + TVFVGN+
Sbjct: 356 NCYIRFETKPEAQAACAMNGQLVEGNRIRVTMHMQKQ---------MGHASSTVFVGNI 405
>gi|323451637|gb|EGB07513.1| hypothetical protein AURANDRAFT_59062 [Aureococcus anophagefferens]
Length = 350
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGNL ++ ++ L + ++ G PI + +PR Q +
Sbjct: 14 TCYVGNLDEQLTEELLWEMMLQAG----------PIGNVHLPRDKVTGSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + AL NM + G +R+++A +K L ++ +FVG L
Sbjct: 57 GFVEFRSEEDADYALKVMNMVKLFGKPLRVNKASQDKKTL--------EVGANLFVGGLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK-RRNL 404
DV ++ +Y F + E +++R P KG +V + + EA++L I+ N
Sbjct: 109 VDVDEKLLYDTFSAFGTI---TETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQ 165
Query: 405 KLRDRELRLSHA 416
L ++++++ +A
Sbjct: 166 FLCNKQVQVGYA 177
>gi|170089671|ref|XP_001876058.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649318|gb|EDR13560.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 616
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 53/195 (27%)
Query: 272 AILQKQINENADSVHAYIVFKS---------------------EQSTEAALAFNMAVIGG 310
A + ++ + +ADSV+AY+VF E + A + +
Sbjct: 301 AFINQEFHSSADSVNAYVVFAHPVEVKDRPANLPPPKEVMDPYEAAKAAVEKCDGTIFME 360
Query: 311 NHIRLD----RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE-- 364
IR+D A RK+ G+D + D K VFVGNL F K+E++ F G+ E
Sbjct: 361 RMIRVDVVGREAVETRKE--GKDG-VGDPKLAVFVGNLDFASKEEDLRVFFEGVVSAERG 417
Query: 365 -----------------SSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLK 405
+ V VR++R ++GKG AY+ F RE + L ++ + LK
Sbjct: 418 PPPLKEDEDEEGMKKPNTWVTRVRIVRDKETQLGKGFAYIQFADRECVDEVLALEEQKLK 477
Query: 406 LRDRELRLSHAQQNC 420
R+LR+ Q C
Sbjct: 478 FAKRKLRV----QRC 488
>gi|156055150|ref|XP_001593499.1| hypothetical protein SS1G_04926 [Sclerotinia sclerotiorum 1980]
gi|154702711|gb|EDO02450.1| hypothetical protein SS1G_04926 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 488
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH- 286
++VGNLP V K+ L K F++F +++ I I P G K + VH
Sbjct: 175 VWVGNLPWSVSKEELRKWFVEFSDLEEENITR---IHMPGPNDGKPANKVEKKFGKPVHN 231
Query: 287 ---AYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKLKGEDAPLYDIKKT 338
AY+ F +E+ + A+ + ++ G + + P +K+ E P K
Sbjct: 232 KGFAYVDFATEEQVKMAVELSEQLLTGRRLLIKDNKSFEGRPEKKEAVIEGKPP---SKK 288
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+FVGNL FD +E + + F CG ++E + V KG A+++F+ AA
Sbjct: 289 IFVGNLRFDATEEILKEHFEKCG------AIEKIHVATFEDSGKCKGYAWIVFEEVSAAQ 342
Query: 397 LVIK 400
+K
Sbjct: 343 SAVK 346
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGK---------------- 382
V+VGNLP+ V EE+ + F +DLE E + I P GK
Sbjct: 175 VWVGNLPWSVSKEELRKWFVEFSDLEE--ENITRIHMPGPNDGKPANKVEKKFGKPVHNK 232
Query: 383 GIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G AYV F T E + ++ L R L +
Sbjct: 233 GFAYVDFATEEQVKMAVELSEQLLTGRRLLI 263
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 31/190 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + F K+GE IID + P + N
Sbjct: 905 TLFVTNFPPTADENYIRDLFSKYGE----------IIDIRFP--------SLKYNTHRRF 946
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ + +ALA + + +G G H+ + + P RK+ + + P+Y+ + + V N+
Sbjct: 947 CYLQFKTSVAAHSALALDGSAVGNGLHLVVKISDPSRKQDR--NGPIYE-GREIHVSNVN 1003
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRN 403
+ ++++ +LF S V ++R P G KG YV+F ++E A +
Sbjct: 1004 WSASEDDLKELF-------SRFGTVELVRLPRKVDGGSKGFGYVVFSSKEEATAALAMHE 1056
Query: 404 LKLRDRELRL 413
+ R R L +
Sbjct: 1057 QEFRGRPLHV 1066
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|378729012|gb|EHY55471.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 392
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 91/227 (40%), Gaps = 53/227 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNL K+ L+K F E IR+ I +P+ K N+ A
Sbjct: 107 IWIGNLAFSTTKEDLLKFFT---ENSKNVIRNDQITRIHLPQGQPKFGKPTNKG----FA 159
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKL-KGEDAPLYDIKKTVFV 341
YI F E + + AL F+ ++GG + + A P KK GE P K +FV
Sbjct: 160 YIDFSDEATLQTALEFSEGLLGGRRVLIKNAKDFEGRPESKKADAGEARP---PSKRIFV 216
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAYVLFKTREAA 395
GNL FD + DLE A I H HM KG A++ F+ +A
Sbjct: 217 GNLDFDTT----------VEDLEEHFGACGPIVHTHMATFEDTGKCKGFAWIDFEQLSSA 266
Query: 396 NLVIK---------------RRNL------KLRDRELRLSHAQQNCT 421
++ +R++ KL+ R+LR+ A+ T
Sbjct: 267 EFAMRGWVEPRAGREGVSSSKRSVQRIWLNKLKGRKLRMEFAEDKAT 313
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 40/207 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++F+GNLP + K+ L + F G+I+ V S+P KG
Sbjct: 512 KSVFIGNLPFSMTKEWLEQIFSWCGDIERV---SIPTDWESGKIKG-------------- 554
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-----------LYD 334
A++ F E S E A+ N G +R++ + P G L +
Sbjct: 555 FAFLDFADEDSAEKAVGKNGEDCEGRDLRINYSFPKNDNAHGGKGKGGKGKGKGHHELGE 614
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFK 390
+VFVGNLP+ + + +Y++F CG R G +G AY+ F
Sbjct: 615 KSASVFVGNLPWSMTQDWLYEVFGDCG--------SITRCFMPTDRETGNPRGFAYIDFD 666
Query: 391 TREAANLVIKRRNLKLRDRELRLSHAQ 417
T ++A K L R++R+++ Q
Sbjct: 667 TEDSAENATKLSGTDLEGRQIRVNYNQ 693
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKLMRDPETGKSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|239613287|gb|EEQ90274.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ER-3]
Length = 419
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP VKK + F G + + I T+I I Q +N A
Sbjct: 83 VWIGNLPFNVKKDDVRVFFTSSGSLKNEEI-------TRIHLPEGIKQNGKPQNKG--FA 133
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKG---EDAPLYDIKK 337
Y+ F ++++ EAA+A + +I G + R P+ + G ++ ++ K
Sbjct: 134 YVDFTTQKAMEAAIAMSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSK 193
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VFVGNL FDV E + + F CG+ +E+++V KG A+V F++ +AA
Sbjct: 194 RVFVGNLGFDVTKEILEEHFKPCGV------IESIQVATFQDTGKCKGYAWVEFESIDAA 247
Query: 396 NLVIK 400
++
Sbjct: 248 EAAMR 252
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|326478575|gb|EGE02585.1| RNA binding protein Rnp24 [Trichophyton equinum CBS 127.97]
Length = 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++ +++ F+ K G +DS +I V I D+ RKG K
Sbjct: 93 VWIGNLPFTATRE-MLRTFLTSKSGILDS-QITRVHIPDSGTKRKGVKQNKGF------- 143
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------- 338
AY+ F S++ E A+A + ++GG + + A ++ E A D+K
Sbjct: 144 -AYVDFTSQEIVERAIALSEELVGGRRVLIKDATNFEGRVVKE-ADRDDLKTAGGNPPST 201
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FD E + + F CG S+ + V KG A+V F++ E++
Sbjct: 202 KIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKGYAWVEFESTESS 255
Query: 396 NLVIK 400
++
Sbjct: 256 QAAVR 260
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E E K E + G L F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 221 KKRKADEEPEQSPKKAKTEDPNVTGNL----FIGNLSWNVDEEWLTREFEEFGELKGVRI 276
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I D R Y+ F++ + AL A N A + IRLD
Sbjct: 277 ----ITDRDSGRSKGF-------------GYVEFENAEDAAKALEAKNGAELDNRAIRLD 319
Query: 317 RACP-------PRKKLKGEDAPLYD----IKKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
+ P P+++ + D +T+FVGNL FD ++ + + F +
Sbjct: 320 FSVPRQNNAQNPQQRGQERRQQYGDKASEPSQTLFVGNLSFDATEDMVREYF----EEHG 375
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSHA 416
S+ +R+ KG YV + + A + + L R +RL ++
Sbjct: 376 SINGIRLPTDRESGAPKGFGYVEMGSIDEAKAAYEALQGADLGGRPMRLDYS 427
>gi|357631625|gb|EHJ79094.1| hypothetical protein KGM_15573 [Danaus plexippus]
Length = 886
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 140/313 (44%), Gaps = 72/313 (23%)
Query: 155 GKKRSENK----KTKKRKRDDVEKDYVEKK--YGVIAKEEEGKKVGVGEKRKKADNETED 208
GK++S+N K K++K D+++ D EK GV ++ V + KR + D+ +ED
Sbjct: 584 GKRKSDNTSEEVKVKRKKDDNMDVDESEKDGDSGVKRPHDDNDHV-IETKRPRKDSSSED 642
Query: 209 MLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIP 268
+ G+ T+FV NL K + L + +FGEI S+R+R+
Sbjct: 643 AV-----------GREACTLFVSNLDFKFNENNLRNKLSEFGEIVSMRVRA--------- 682
Query: 269 RKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE 328
+ S+ Y +K+ +S + AL + V+ G + L R + K +
Sbjct: 683 --------GVKAFGGSI-CYCQYKTTESVDEALKHDRTVLDGRPMFLSRYSSKKTKPTFK 733
Query: 329 DAPLYDIKKTVFVGNLPFDVKDE----EIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGI 384
A + K +FV NLPF + EI+ + LND +R++ + KG+
Sbjct: 734 YAMTTE-KNKLFVRNLPFSHCTKEALAEIFDKYGKLND-------IRIVTFKDGK-PKGL 784
Query: 385 AYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKF---V 440
AY+ ++ E+A++ + + N L ++DR + + AV++PP K V
Sbjct: 785 AYIDYEDEESASVALSKTNGLLVKDRNIEV-----------------AVSAPPPKGETNV 827
Query: 441 LDS--RTLGSGNR 451
L S R +G G R
Sbjct: 828 LGSVKRDVGGGMR 840
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL L ++ L + F++ G P+++ +P+ NA +
Sbjct: 9 TIYVGNLDLACTEEILWEVFVQAG----------PVVNVYVPKDRV-------SNAHQGY 51
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G +R+++A +K D+ +FVGNL
Sbjct: 52 GFVEFANEEDADYAIKVLNMIKLHGKPVRVNKASQDKKS--------NDVGANLFVGNLD 103
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + + +++R P +G +V + + EAA+ I+ N +
Sbjct: 104 SELDEKLLYDTFSAFGVV---ITTPKIMRDPDSGNSRGFGFVSYDSFEAADAAIEAMNGQ 160
Query: 406 -LRDRELRLSHA-------QQNCTPSKR 425
L +R + ++ A +++ TP++R
Sbjct: 161 FLCNRPISVTFAYKKDTRGERHGTPAER 188
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG+L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TVYVGSLDDKVTEAILWELFLQAG----------PVVNVHMPKDRVTQSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EAA+ ++ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFEAADAALEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S A
Sbjct: 166 FLCNRAISISFA 177
>gi|401885764|gb|EJT49852.1| RNA-binding protein rnp24 [Trichosporon asahii var. asahii CBS
2479]
Length = 413
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++++GNL + ++ L +EFI+ G I + + + +P+K Q EN
Sbjct: 124 SVWIGNLSFRTSEQAL-REFIETG-ITELGGEAGCVTRLNLPKKAG--HGQFAENKG--F 177
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDR---------ACPPRKKLKGEDAPLYDIKK 337
AY F +E AL + + G + + R A P+ G +++
Sbjct: 178 AYCDFTNEAMMLLALGLSERPLEGRRLLIKRGDDHRANPDARTPKTLPSGPGTAPSILQR 237
Query: 338 -------TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
T+FVGNLPFDV +EE L DL S + RV + KG A+ FK
Sbjct: 238 QKNPESATLFVGNLPFDVTEEE-------LRDLRSGLIKTRVAQFEDTGRCKGFAFWDFK 290
Query: 391 TR-EAANLVIKRRNLKLRDRELRLSHAQQNCT 421
+ A ++ RRN LR ++L + A ++ T
Sbjct: 291 SSAHAKAALMNRRNHFLRGQKLNVQFASESAT 322
>gi|365758792|gb|EHN00619.1| Nop13p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 400
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 23/233 (9%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL + K L++ FI + E + R+ I +PR A K N +
Sbjct: 124 VWIGNLSFETTKDDLVRFFIAKTRDNEEEKSRVNEKDITRLSMPRVAA---KNSNSMKNK 180
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 181 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 238
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG V +R+ KG A++ FK E +
Sbjct: 239 FVGNLSFDVTDDLLRKHFQHCG------DVVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 292
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKF-VLDSRTLGS 448
+K ++ K+ R LR+ + + RK V + P+ F + D+R S
Sbjct: 293 ALKDKSCRKIAGRPLRMEYGEDRSKRQVRKKVENVTHDKPRSFDISDNRRYDS 345
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD G+L FVGNLP + L + F + G +D +I I K
Sbjct: 109 DDPGRL----FVGNLPYTYTSEELAQVFSEAGRVDDAQI---------------IYDKVT 149
Query: 279 NENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY---- 333
N + A++ + E++ +A F+ A++GG R++ PR GE +
Sbjct: 150 NRSRG--FAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPR---GGERRTVTMSGR 204
Query: 334 ---DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
D ++ GNL + V+ + + +F G L + RVI +G +V F
Sbjct: 205 RRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDA----RVIFERETGRSRGFGFVSFS 260
Query: 391 TREAANLVIKRRN-LKLRDRELRLSHAQQNCTPSKRKDVAPA 431
T E A ++ + ++L R LRLS A+QN P A A
Sbjct: 261 TAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSPPSTAQA 302
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 31/190 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P +K + F +FGE IID + P + N
Sbjct: 901 TLFVTNFPPTADEKYIRDLFHEFGE----------IIDIRFP--------SLKYNTHRRF 942
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGN-HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ ++ + A + V+G N H+ + P RK+ + P+Y+ + + V N+
Sbjct: 943 CYVQFKTGEAAQNATKLDGTVVGNNLHLVAKISDPSRKQDR--HGPMYE-GREIHVSNVD 999
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRN 403
+ ++++ +LF S V ++R P G KG YV+F T+E A +
Sbjct: 1000 WKANEDDLKELF-------SKYGHVELVRIPRKVDGGSKGFGYVVFSTKEEAQAALALHE 1052
Query: 404 LKLRDRELRL 413
+ R R L +
Sbjct: 1053 HEFRSRPLHV 1062
>gi|261188487|ref|XP_002620658.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
gi|239593142|gb|EEQ75723.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis SLH14081]
Length = 419
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP VKK + F G + + I T+I I Q +N A
Sbjct: 83 VWIGNLPFNVKKDDVRVFFTSSGSLKNEEI-------TRIHLPEGIKQNGKPQNKG--FA 133
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKG---EDAPLYDIKK 337
Y+ F ++++ EAA+A + +I G + R P+ + G ++ ++ K
Sbjct: 134 YVDFTTQKAMEAAIAMSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSK 193
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VFVGNL FDV E + + F CG+ +E+++V KG A+V F++ +AA
Sbjct: 194 RVFVGNLGFDVTKEILEEHFKPCGV------IESIQVATFQDTGKCKGYAWVEFESIDAA 247
Query: 396 NLVIK 400
++
Sbjct: 248 EAAMR 252
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ ++++ P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMQDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|383857497|ref|XP_003704241.1| PREDICTED: splicing factor 3B subunit 4-like [Megachile rotundata]
Length = 413
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 34/202 (16%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G+ +++IFVG L V + L EF + GE+ S R++ + +Q ++
Sbjct: 268 GEEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQ---------------MDRQTGKS 312
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDI 335
Y+ F S + A+ N I G + LD A P P ++ K +
Sbjct: 313 KG--FGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRSEP 370
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKTR 392
T+FVGNL F + +Y+LF + + V +R P R KG YV F
Sbjct: 371 SATLFVGNLAFSATQDAVYELFGAVGE-------VVNVRLPTDRDSGQPKGFGYVEFADV 423
Query: 393 EAANLVIKR-RNLKLRDRELRL 413
E A+ + R +RL
Sbjct: 424 ETASKALNELGGTDFEGRNIRL 445
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRH 375
D A PP KK+K + A + K++FVG L ++V DE + F ++ S+ RV
Sbjct: 251 DDAAPPSKKVKTDGAEGGEEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSA----RVQMD 306
Query: 376 PHMRVGKGIAYVLFKTREAANLVIKRRNLKLRD-RELRLSHAQQNCTP 422
KG YV F +A ++ N + D R + L A P
Sbjct: 307 RQTGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPRGPP 354
>gi|315047680|ref|XP_003173215.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
gi|311343601|gb|EFR02804.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum CBS
118893]
Length = 1329
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 49/251 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV N P + + + F +GEI VR S + N
Sbjct: 922 TIFVTNFPPTADENYIRELFHSYGEIAEVRFPS------------------LKYNTHRRF 963
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S S AA + +G G + + + P +++ + + Y+ + ++V N+P
Sbjct: 964 CYVQFTSSSSAYAATGLDKKDLGEGLELVVKISDPSQRQAR---SGAYEEGREIYVCNIP 1020
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTRE--AANLVIKR 401
+ + ++ +LF D+ES +R P G +G A+V F T++ A L +
Sbjct: 1021 YKTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFAFVSFATKDQSTAALALNE 1073
Query: 402 RNLKLRDRELRLSHA-----QQNCTPSKRKDVAPAVN---------SPPKKFVLDSRTLG 447
+ K R+ +RLS + QN S+ + +PA N SPP ++D
Sbjct: 1074 KTFKGRELNVRLSTSTGAKRHQNTIVSRSE--SPATNAQRNGTSTASPPPGSLVDGHIKP 1131
Query: 448 SGNRSNSKVAM 458
G+R +A+
Sbjct: 1132 KGDRHIRTLAL 1142
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ +M + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD +TIFVG L V L EF + GEI S + Q
Sbjct: 32 DDGSAPTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHV-----------------QTDR 74
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP-------PRKKLKGEDAP 331
N ++ F S ++ + AL N I G I +D++ R+ DAP
Sbjct: 75 NTGRSRGFGFVTFASPEAVDKALELNGKEIDGRSINVDKSVEKDQNQVRERRARTFGDAP 134
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVL 388
+ +FVGNL FD +E+++++F S +++ + P R KG YV
Sbjct: 135 -SEPSSRLFVGNLSFDATEEQLWEVF-------SDYGSIKSVHMPTSRDSGRPKGFGYVE 186
Query: 389 FKTREAA 395
F+ E+A
Sbjct: 187 FEDIESA 193
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F K G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI--KKTVFVG 342
+A+I + + Q+ AL A N V I+++ A P + P DI +FVG
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRVFLDKEIKVNWATSPG------NTPKTDISSHHHIFVG 100
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKR 401
+L +++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 101 DLSPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSM 156
Query: 402 RNLKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 157 NGQWIGSRNIRTNWSTRKLPPPR 179
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD G+L FVGNLP + L + F + G +D +I I K
Sbjct: 109 DDPGRL----FVGNLPYTYTSEELAQVFSEAGRVDDAQI---------------IYDKVT 149
Query: 279 NENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY---- 333
N + A++ + E++ +A F+ A++GG R++ PR GE +
Sbjct: 150 NRSRG--FAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPR---GGERRTVTMSGR 204
Query: 334 ---DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
D ++ GNL + V+ + + +F G L + RVI +G +V F
Sbjct: 205 RRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDA----RVIFERETGRSRGFGFVSFS 260
Query: 391 TREAANLVIKRRN-LKLRDRELRLSHAQQNCTPSKRKDVAPA 431
T E A ++ + ++L R LRLS A+QN P A A
Sbjct: 261 TAEDAQAALESLDGVELEGRPLRLSLAEQNPPPGSPPSTAQA 302
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L+ F + G++ +I I+E +
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKI--------------------IHEPGNDP 52
Query: 286 HAYIVFKSEQSTEAA-LAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK--TVFVG 342
+ ++ F QS +A LA N + G ++++ A P + P D K +FVG
Sbjct: 53 YCFVEFSDHQSAASALLAMNKRLCFGKEMKVNWATSPG------NTPKLDTSKHHHIFVG 106
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKR 401
+L +++ ++ F D+ RV+R P KG +V F K +A N +
Sbjct: 107 DLSPEIETTQLRDAFAPFGDISD----CRVVRDPQTLKSKGYGFVSFVKKADAENAIGTM 162
Query: 402 RNLKLRDRELRLSHA 416
L R +R + A
Sbjct: 163 NGQWLGSRAIRTNWA 177
>gi|241708466|ref|XP_002403282.1| spliceosome associated protein, putative [Ixodes scapularis]
gi|215505045|gb|EEC14539.1| spliceosome associated protein, putative [Ixodes scapularis]
Length = 408
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDEKVSDTILWELFVQAG----------PVVNVHMPKDRVTGHHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFEASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRAITISYA 177
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G KRK E E + +K D E + +FVG L V L EF GE+ S
Sbjct: 167 GNKRKA---EGESVAPAKKARADDGEEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSA 223
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+ + D + Y+ F +++ A+ + + I G IR+
Sbjct: 224 RV----VFDR-------------DSQKSRGFGYVEFADLEASAKAIEKDGSEIDGRAIRV 266
Query: 316 DRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+ A + E A +++ K+ T+++G+L F V ++++Y+ F D++S
Sbjct: 267 NYATQRKPNEAAEKRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQS---- 322
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHA 416
VR+ KG YV F + E A+ +K N ++ R +R+ A
Sbjct: 323 VRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRVDFA 370
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 321 PRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHM 378
P KK + +D + VFVG L ++V ++ + F CG V + RV+
Sbjct: 179 PAKKARADDG-EEEATTNVFVGQLSWNVDNDWLKSEFESCG------EVVSARVVFDRDS 231
Query: 379 RVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQ---NCTPSKRKDVAPAVNSP 435
+ +G YV F EA+ I++ ++ R +R+++A Q N KR V SP
Sbjct: 232 QKSRGFGYVEFADLEASAKAIEKDGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQSP 291
Query: 436 P 436
P
Sbjct: 292 P 292
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L K + L + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYVGGLDDKATETLLWELFVQSG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKSL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 LEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G PI+ +P+ Q +
Sbjct: 14 TIYVGGLDEKVSDNLLWELFVQAG----------PIVSVHMPKDRITGLHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A+V F + EA++ I N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFVNFASFEASDAAIDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRAISISYA 177
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 38/207 (18%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++ +FVG L + ++L + F GEI S R+ + ++ ++
Sbjct: 287 IKNVFVGGLSWGITNESLQEAFESCGEIVSARV---------------VTDRETGKSRG- 330
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP----------PRKKLKGEDAPLYD 334
Y+ F +AAL + G I +D + P P+K+ E L
Sbjct: 331 -FGYVDFVDAAGAKAALEMAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDE---LSA 386
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
+TVFVGNL F+ + +++ F V +VRV KG AYV F ++
Sbjct: 387 PSQTVFVGNLSFESTQDAVWESFSDFG----GVNSVRVPTDMETGRPKGFAYVEFGDVDS 442
Query: 395 ANLVIKR----RNLKLRDRELRLSHAQ 417
A + + L++ R +RL +Q
Sbjct: 443 AKKAVDQGRSSEGLEIDGRRVRLDFSQ 469
>gi|302498397|ref|XP_003011196.1| RNA binding protein Rnp24, putative [Arthroderma benhamiae CBS
112371]
gi|291174745|gb|EFE30556.1| RNA binding protein Rnp24, putative [Arthroderma benhamiae CBS
112371]
Length = 398
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++TL + F+ K G +DS +I V I D+ RKG K
Sbjct: 91 VWIGNLPFTATRETL-RTFLMSKSGILDS-QITRVHIPDSGTKRKGVKQNKGF------- 141
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------- 338
AY+ F S++ E A+A + ++GG + + A ++ E A D+K
Sbjct: 142 -AYVDFTSQEIVERAIALSEELVGGRRVLIKDATNFDGRVVKE-ADGDDLKAAGGNPPST 199
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FD E + + F CG S+ + V KG A+V F++ +++
Sbjct: 200 KIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKGYAWVEFESTQSS 253
Query: 396 NLVIK 400
++
Sbjct: 254 QAAVR 258
>gi|302653686|ref|XP_003018666.1| RNA binding protein Rnp24, putative [Trichophyton verrucosum HKI
0517]
gi|291182325|gb|EFE38021.1| RNA binding protein Rnp24, putative [Trichophyton verrucosum HKI
0517]
Length = 398
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++TL + F+ K G +DS +I V I D+ RKG K
Sbjct: 91 VWIGNLPFTATRETL-RTFLTSKSGILDS-QITRVHIPDSGTKRKGVKQNKGF------- 141
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------- 338
AY+ F S++ E A+A + ++GG + + A ++ E A D+K
Sbjct: 142 -AYVDFTSQEIVERAIALSEELVGGRRVLIKDATNFDGRVVKE-ADGDDLKTAGGNPPST 199
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FD E + + F CG S+ + V KG A+V F++ +++
Sbjct: 200 KIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKGYAWVEFESTQSS 253
Query: 396 NLVIK 400
++
Sbjct: 254 QAAVR 258
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVSETLLWEMFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ L F + G + S +I I E ++
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKI--------------------IREASNDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + S S + ALA N I+++ A P + K + + Y I FVG+L
Sbjct: 48 YAFIEYASHTSAQTALAAMNKRFFLKKEIKVNWATSPGNQPKTDTSQHYHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R P +G A+V F K EA N +
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNG 159
Query: 404 LKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
L R +R + S RK AP NS
Sbjct: 160 QWLGSRSIRTNW-------STRKPPAPRDNS 183
>gi|328767802|gb|EGF77850.1| hypothetical protein BATDEDRAFT_33617 [Batrachochytrium
dendrobatidis JAM81]
Length = 308
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+++VGN+ + + + F++ G P+++ +P+ Q +
Sbjct: 12 SVYVGNIEDRATDSLIWELFLQAG----------PVVNVYLPKDRVTQMHQ-------GY 54
Query: 287 AYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +EQ E A+ NM + G +R+++A + L D+ T+F+ NL
Sbjct: 55 GFVEFMTEQDAEYASKVMNMVRLYGKPLRVNKATSDKMAL--------DVGATLFISNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
V ++ +Y F + S+ ++ R+P KG +V F T EA++ I+ N +
Sbjct: 107 MTVDEKALYDTFSAFGMIASTP---KISRNPETGESKGYGFVSFSTFEASDAAIEAMNGQ 163
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 164 FLANRAIAVSYA 175
>gi|48097884|ref|XP_393914.1| PREDICTED: splicing factor 3B subunit 4 [Apis mellifera]
Length = 413
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|339244657|ref|XP_003378254.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972855|gb|EFV56501.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 432
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 36/195 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G PI+ +P+ + S H
Sbjct: 14 TIYVGGLDERVSETILWELFVQAG----------PIVSVHMPK----------DRISSTH 53
Query: 287 ---AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
++ F E+ + A+ NM + G IR+++A +K L DI VF+G
Sbjct: 54 QGYGFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DIGANVFIG 105
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NL +V ++ +Y F L ++ +++R P KG A++ F + EA++ I+
Sbjct: 106 NLDPEVDEKLLYDTFSAFGVL---LQVPKIMRDPETGNSKGFAFINFASFEASDAAIEAM 162
Query: 403 NLK-LRDRELRLSHA 416
N + L +R + S+A
Sbjct: 163 NGQYLCNRPISASYA 177
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVSETLLWEMFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + EA++ + N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|380011609|ref|XP_003689892.1| PREDICTED: splicing factor 3B subunit 4-like [Apis florea]
Length = 413
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|367020688|ref|XP_003659629.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
gi|347006896|gb|AEO54384.1| hypothetical protein MYCTH_2296912 [Myceliophthora thermophila ATCC
42464]
Length = 327
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 35/199 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T FV N+ ++ ++ L K F K+G + V I P + KG +
Sbjct: 131 TAFVRNIVFELSEEHLTKAFSKYGNVTKVYIARDP----RGMSKG--------------Y 172
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPR------KKLKGEDAPLYDIKKTV 339
++ F++ + +AA N + G I C PR K+ K ++P + ++ +
Sbjct: 173 GFVSFETPEELKAACDNVNGSFWHGRRI----TCIPRATEGRQKQTKHRNSPDHPTQQ-L 227
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVGN+P++ D E+ +LF G+++LE VRV +G A+ F T EAA
Sbjct: 228 FVGNIPYETTDAELNRLFRGMDNLED----VRVAVDRTTGWPRGFAHADFTTVEAAIEAK 283
Query: 400 KR-RNLKLRDRELRLSHAQ 417
K+ KL +R LR+ A+
Sbjct: 284 KKLEGAKLGNRVLRIDFAE 302
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 96/201 (47%), Gaps = 30/201 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ + + F++ G P+++ +P+ NA +
Sbjct: 32 TVYVGNLDPQVTEEIVWEVFVQAG----------PVVNVYMPKDRV-------SNAHQGY 74
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A++ ++ E+ + A+ NM + G IR ++A +K D+ +FVGNL
Sbjct: 75 AFVEYRGEEDADYAIKVLNMIKLFGKPIRANKASVDKKST--------DVGANLFVGNLD 126
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
D+ ++ +Y F + + +++R P +G +V + + EA++ I+ N +
Sbjct: 127 PDMDEKLLYDTFSAFGVV---ITTPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQ 183
Query: 406 -LRDRELRLSHAQQNCTPSKR 425
L +R + +++A + T +R
Sbjct: 184 FLCNRPISVTYAYKKDTNGER 204
>gi|307208549|gb|EFN85888.1| Splicing factor 3B subunit 4 [Harpegnathos saltator]
Length = 429
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 97/193 (50%), Gaps = 21/193 (10%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEID-SVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
TI+VG L KV + + + F++ G + + I + +++ +P+ Q+++
Sbjct: 14 TIYVGGLDDKVTESLMWELFVQSGPVGMYIYISFMHVLNVHMPKDRV---TQMHQG---- 66
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ ++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 67 YGFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNL 118
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+V ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N
Sbjct: 119 DPEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGFAFINFASFDASDASIEAMNG 175
Query: 405 K-LRDRELRLSHA 416
+ L +R + +S+A
Sbjct: 176 QYLCNRPISVSYA 188
>gi|414587095|tpg|DAA37666.1| TPA: hypothetical protein ZEAMMB73_462363 [Zea mays]
Length = 679
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 37/195 (18%)
Query: 356 LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSH 415
+ CG + L +++ V + V++ +EAAN V ++R++K+RDR LRL+H
Sbjct: 490 ILCGFDRLSANM------------VARTFDIVVYAVQEAANSVARKRDMKIRDRVLRLTH 537
Query: 416 AQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNS--------KVAMSYQGLQASK 467
A+ K+ +V P K V GN+SN +SYQGL++SK
Sbjct: 538 AKPVDAAPKKTEVKKRSRVPNHKEVST-----PGNKSNEGSDKAKCKASVLSYQGLRSSK 592
Query: 468 SCTQKKVHSGSSGVVKMKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSRQAGMK 527
S KKV + K+ +T + + KRPAVA RKA +Q K
Sbjct: 593 SGVVKKVKVTQQPSNQGKQRKTDE-TGATARKAKRPAVAARKA-----------KQLAKK 640
Query: 528 RKMESQTPEISQRKK 542
RK+++ TPE + R K
Sbjct: 641 RKVDASTPENTHRSK 655
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 83/206 (40%), Gaps = 43/206 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL V L +EF G + S R+ I D + R
Sbjct: 240 TLFVGNLSWNVDDAMLAEEFKFCGTVTSARV----ITDRESGRSKGF------------- 282
Query: 287 AYIVFKSEQSTEAALAFNM-AVIGGNHIRLD----------RACPPRKKLKGED-APLYD 334
Y+ F + + E A A I G I++D A R K G+ +P D
Sbjct: 283 GYVDFATPEEAEKAHGEKQGAFIDGREIKVDFSTGKATNSNDAAGARAKKYGDTVSPESD 342
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKT 391
T+FVGNLPFD ++ + F S V V+ +R P + KG YV F +
Sbjct: 343 ---TLFVGNLPFDADEDSVGAFF-------SEVAEVKSLRLPTEQESGRRKGFGYVTFNS 392
Query: 392 REAANLVIKRRNLK-LRDRELRLSHA 416
E A ++ N + + R RL ++
Sbjct: 393 VEDAKSAFEQLNGQSINGRNCRLDYS 418
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 30/204 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGHVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSTYQAATTALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSKRKD 427
+ R +R + + + P + +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPREPN 182
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 96/232 (41%), Gaps = 37/232 (15%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA++E E K EE +D G + +FVGNL + + L +EF +FGEI R
Sbjct: 239 KKRKAEDEPEASTKKSKTEETAEDNGS--KNLFVGNLSWNIDDEWLYREFEEFGEISGAR 296
Query: 257 IRSVPIIDTKIPR-KGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIR 314
+ I D R KG Y+ F KS + A A A+I G
Sbjct: 297 V----ISDKATGRSKG--------------FGYVEFVKSSDAAAALAAKKGALIDGREAN 338
Query: 315 LDRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLES 365
+D + P PR++ A D K T+F+GNL FD + + + F
Sbjct: 339 VDFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFG----EHG 394
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI-KRRNLKLRDRELRLSHA 416
+V VR+ KG YV F + E A + R +RL +A
Sbjct: 395 TVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMGADIAGRPVRLDYA 446
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVGNL +V ++ L + F++ G P++D KIPR N S +
Sbjct: 7 TIFVGNLDQQVDEELLWELFVQMG----------PVVDAKIPRDRIT-------NTHSGY 49
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL- 344
A++ FK E A+ N + G ++L+R + + A D+ ++VGNL
Sbjct: 50 AFVEFKHEHDANYAIQVMNQIKLFGRPMKLNRYD------QDKSAKNLDVGANLWVGNLD 103
Query: 345 PFDVKDEEIY-QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
P V DE I +LF + + R+ R P KG A+V + E+A+
Sbjct: 104 PVGVSDEGILRELFGQFGVMIQNTP--RIQRDPETMESKGFAFVSYDNFESAD 154
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q +
Sbjct: 14 TVYVGGLDEKVTEALLWELFLQAG----------PVVNTHMPKDRVTQSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVLNMIKLYGKPVRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R KG A++ F + EAA+ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDVESGNSKGYAFINFASFEAADAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S A
Sbjct: 166 YLCNRAITISFA 177
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 32/200 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVG L V + L +EF ++G I R+ I+D + R KG
Sbjct: 264 TVFVGRLSWNVDDQWLGQEFEEYGTIVGARV----IMDGQSGRSKG-------------- 305
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIK 336
+ Y+ F++ ++ +AA+A N I G + LD + P +++ L +
Sbjct: 306 YGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRPANPQPYAQQRAGNFGDQLSEPS 365
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
TVFVGNL F+ ++++ F G D++S +R+ P KG YV F ++A
Sbjct: 366 DTVFVGNLSFNATEDDLSTAFGGCGDIQS----IRLPTDPQSGRLKGFGYVTFSDIDSAK 421
Query: 397 LVIKRRNLKLRDRELRLSHA 416
++ + R RL +
Sbjct: 422 KCVEMNGHFIAGRPCRLDFS 441
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + FI+ G P+++ +P+ Q +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVG----------PVVNCHMPKDRVTQTHQ-------GY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 55 GFVEFLSEDDADYAIKILNMIKLFGKPVRVNKASSHQKNL--------DVGANLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ + + EAA+ ++ N +
Sbjct: 107 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQ 163
Query: 406 -LRDRELRLSHA 416
L +R + +S A
Sbjct: 164 YLCNRPITISFA 175
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN 163
>gi|226291029|gb|EEH46457.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 273
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 45/261 (17%)
Query: 190 GKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLR---------TIFVGNLPLKVKKK 240
G+ V +++ T ++ +GF D +LR TI++GNL +V
Sbjct: 38 GQVTNVAFQQRWNSQYTPSIVRRTGIQGFRDNTSILRSNPEVKPNETIYIGNLFFEVTAD 97
Query: 241 TLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
L ++ KFG I +VRI + D++ +G AY+ F S + EAA
Sbjct: 98 DLKRDLSKFGNILAVRI----VYDSRGMSRG--------------FAYVQFDSIDAAEAA 139
Query: 301 L-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPL----YDIKKTVFVGNLPFDVKDEEIYQ 355
+ NM + G + ++ + +G P + +T+F+GNL F++ D E+ +
Sbjct: 140 INEMNMTIYEGRRVVVNYSS------RGSANPTPTRSNEPTRTLFIGNLSFEMSDRELNE 193
Query: 356 LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF---KTREAANLVIKRRNLKLRDRELR 412
LF + + V VRV +G A+ F ++ +AA ++K + R L
Sbjct: 194 LFKDIKN----VTDVRVSVDRRTGQPRGFAHADFLDVESAQAAFEILKDKAPYGRPLRLD 249
Query: 413 LSHAQQNCTPSKRKDVAPAVN 433
S + ++ T + +DV N
Sbjct: 250 YSFSSRDNTVDRLRDVGSGSN 270
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYAGGLDDKVSESLLWELFVQAG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|340382462|ref|XP_003389738.1| PREDICTED: hypothetical protein LOC100632716 [Amphimedon
queenslandica]
Length = 433
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ IPR +I + +
Sbjct: 14 TIYVGGLDEKVSESVLWELFLQAG----------PVVNIHIPRD------RITQTHQG-Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E + A+ NM + G IR+++A K L DI +F+GNL
Sbjct: 57 GFVEFMGEDDADYAIKIMNMIKLYGKPIRVNKAASNMKSL--------DIGANLFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y +F + ++A +++R KG A+V F + +A++ I+ N +
Sbjct: 109 PEIDEKMLYDIFSAFGVI---LQAPKIMRDVDSGGSKGFAFVNFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R++ +S+A
Sbjct: 166 YLCNRQVSVSYA 177
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + FI+ G P+++ +P+ Q +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVG----------PVVNCHMPKDRVTQTHQ-------GY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE + A+ NM + G +R+++A +K L D+ +F+GNL
Sbjct: 55 GFVEFLSEDDADYAIKILNMIKLFGKPVRVNKASSHQKNL--------DVGANLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ + + EAA+ ++ N +
Sbjct: 107 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQ 163
Query: 406 -LRDRELRLSHA 416
L +R + +S A
Sbjct: 164 YLCNRPITISFA 175
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 43/218 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIF+ L + L + F +FGEI VRI P KG
Sbjct: 91 RTIFIKGLNFSATEDELKELFGQFGEIVEVRI---PRSRDGPGGKG-------------- 133
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-KLKGEDAPLYD--IKKTVFVG 342
Y+ F+S+++ E + + N G I +D A +K G + +++ TVF+G
Sbjct: 134 FGYVEFESKEACEKSRSLNGTDYNGRTIVVDMARSGQKGGAAGTEGRVFNKTDDNTVFLG 193
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKTREAANLVI 399
N+PFDV +++ L L++ E V IR P R G KG A+ +T E A +I
Sbjct: 194 NIPFDVDHDDL------LAHLKTYAE-VTQIRIPEDRETGRPKGFAFASCETTEEARKLI 246
Query: 400 KRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPK 437
N+ DR +R PS+RK+ NS P+
Sbjct: 247 N-SNITYMDRAIR-------AQPSERKN-----NSAPR 271
>gi|452846802|gb|EME48734.1| hypothetical protein DOTSEDRAFT_67685 [Dothistroma septosporum
NZE10]
Length = 386
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 36/199 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNL +V L EF +FGE+ + R+ + D + KG
Sbjct: 205 LYVGNLFFEVTTPQLEAEFSRFGEVANARV----VQDGRGLSKG--------------FG 246
Query: 288 YIVFKSEQSTEAALAFNMAVIGGN------HIRLDRACPPRKKLK-GEDAPLYDIKKTVF 340
YI F ++ + ALA + V G H+R D P R+ + +AP KT+F
Sbjct: 247 YIEFTRQEDADNALALDQKVFQGRRMAVQYHVRRDNTQPRRQDFRTSTNAP----SKTLF 302
Query: 341 VGNLPFDVKDEEIYQLFCGL-NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
+GN+ + + D ++ LF + N L+ V R P +G A+ F E+A
Sbjct: 303 IGNMSYQMSDRDLNDLFREIRNVLDVRVAIDRRSGQP-----RGFAHADFIDIESAQKAK 357
Query: 400 KRRNLK-LRDRELRLSHAQ 417
+ K + DR LR+ +Q
Sbjct: 358 EHLEKKTVYDRRLRIDFSQ 376
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSESLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 32/198 (16%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K +RT+F+ NL V++ + + F + GEI+ +R+ + D K KG
Sbjct: 660 DPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRL----VRDYKGRSKG-------- 707
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
Y+VF QS EAAL + + G + + + C R + + K +
Sbjct: 708 ------FGYLVFTHMQSVEAALKRDRTPVNGRPVFVSK-CNERNQFRFRTGM---EKNKL 757
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI--RHPHMRVGKGIAYVLFKTREAANL 397
FV +PF V ++E+ +LF +L + VR++ R+ H KGIAYV + +A +
Sbjct: 758 FVKGIPFSVTEKELEELFGKYGEL----KGVRLVTYRNGH---SKGIAYVEYANETSATV 810
Query: 398 -VIKRRNLKLRDRELRLS 414
+++ + + D L+++
Sbjct: 811 ALVQTDGMAMGDHTLQVA 828
>gi|426196127|gb|EKV46056.1| hypothetical protein AGABI2DRAFT_207537, partial [Agaricus bisporus
var. bisporus H97]
Length = 590
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 108/298 (36%), Gaps = 110/298 (36%)
Query: 226 RTIFVGNLPLKVKKKTLIKE--------FIKFGEIDSVRIRSVPI--------------- 262
RTIFVGNLPL+V +K +++ FI +I+S R RSVP
Sbjct: 128 RTIFVGNLPLQVAQKRPMQKKLQRHILSFIPSAKIESTRFRSVPFNTPTSNLSTTTATSD 187
Query: 263 ------------------------------------IDTKIPRKGAILQKQINENADSVH 286
++T ++ A + ++ + A +VH
Sbjct: 188 ISTHKNPSQRDHDRTRASSWKTKESTDDPKPDEKQFLNTSQKKRIAFINQEFHSTAATVH 247
Query: 287 AYIVFKSE---------------------QSTEAALAFNMAVIGGNHIRLDRACPPRK-- 323
AYIVF + E + +V IR+D K
Sbjct: 248 AYIVFAYPIPQDSRPKNLPPLDPVMDPFIAAKEVVKKADGSVFMDRIIRVDSVGQKAKIS 307
Query: 324 -----KLKGEDAPLYDI--KKTVFVGNLPFDVKDEEIYQLFCGL------------NDLE 364
+ +GE D K T+FVGNL F ++ ++ F L D E
Sbjct: 308 ATADGEEEGEVGSFSDADPKCTLFVGNLDFTSEEGDLRLFFENLMTTERGDPPPRETDEE 367
Query: 365 SS-------VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKLRDRELRL 413
S+ V+ VR+I+ ++GKG AYV F RE + L LK R+LR+
Sbjct: 368 STEKKPHTWVKRVRIIKDKETQLGKGFAYVQFIDRECVDTLLTFSPDQLKFAKRKLRV 425
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 34/202 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L +EF +FGE+ VRI + +++ +
Sbjct: 233 LFVGNLSWNVDEEWLRREFEEFGELSGVRI---------------MTERESGRSRG--FG 275
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-------PRKKLKGEDAPLYDI---- 335
Y+ + S +AA A A I G I LD A P PR+K + D
Sbjct: 276 YVEYADASSAKAAYEAKKDAEIDGRTINLDYAKPRDANNQAPREKAQNRARSFGDQTSPE 335
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT-REA 394
T+FVGNL F V + + ++F G + ++ +R+ KG YV F + EA
Sbjct: 336 SNTLFVGNLVFGVDENAVREVFEG----QGQIQGIRLPTDAETGRPKGYGYVEFSSVDEA 391
Query: 395 ANLVIKRRNLKLRDRELRLSHA 416
+ + + R +RL +
Sbjct: 392 RQALNDLQGTDIGGRAIRLDFS 413
>gi|225685148|gb|EEH23432.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226294474|gb|EEH49894.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 441
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP KK + K G + + I + + D GA KQ + + A
Sbjct: 97 VWVGNLPFTAKKSDIRKFLTGSGTLSNEDITRIHLPD------GA---KQNGKAQNKGFA 147
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDA------------- 330
Y+ F + ++ E A+A + +I G + A P + GE A
Sbjct: 148 YVDFSTSKAMETAIAMSEQLINGRRALIKNAKSYAGRPERTKGGESAAGGRGVNNSSMAA 207
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
P + + +FVGNL FDV E + + F CG S+E+V V KG A+V
Sbjct: 208 PGKEPSQRIFVGNLGFDVTKEILEEHFKPCG------SIESVHVATFEDSGKCKGYAWVE 261
Query: 389 FKTREAANLVIK 400
F++ + A ++
Sbjct: 262 FESIDGAEAAVR 273
>gi|327357349|gb|EGE86206.1| RNA binding protein Rnp24 [Ajellomyces dermatitidis ATCC 18188]
Length = 419
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 27/185 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP KK + F G + + I T+I I Q +N A
Sbjct: 83 VWIGNLPFNAKKDDVRVFFTSSGSLKNEEI-------TRIHLPEGIKQNGKPQNKG--FA 133
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKG---EDAPLYDIKK 337
Y+ F ++++ EAA+A + +I G + R P+ + G ++ ++ K
Sbjct: 134 YVDFTTQKAMEAAIAMSEQLISGRRALVKNANNFVGRPDKPKDEAAGNKTSNSTVHAPSK 193
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VFVGNL FDV E + + F CG+ +E+++V KG A+V F++ +AA
Sbjct: 194 RVFVGNLGFDVTKEILEEHFKPCGV------IESIQVATFQDTGKCKGYAWVEFESIDAA 247
Query: 396 NLVIK 400
++
Sbjct: 248 EAAMR 252
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA++E E K EE +D G + +FVGNL + + L +EF +FGEI R
Sbjct: 213 KKRKAEDEPEASTKKSKTEETAEDNGS--KNLFVGNLSWNIDDEWLYREFEEFGEISGAR 270
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRL 315
+ I D R Y+ F KS + A A A+I G +
Sbjct: 271 V----ISDKATGRSKGF-------------GYVEFVKSSDAAAALAAKKGALIDGREANV 313
Query: 316 DRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D + P PR++ A D K T+F+GNL FD + + + F +
Sbjct: 314 DFSTPRDTTAPRERANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFG----EHGT 369
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI-KRRNLKLRDRELRLSHA 416
V VR+ KG YV F + E A + R +RL +A
Sbjct: 370 VVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMGADIAGRPVRLDYA 420
>gi|357614441|gb|EHJ69078.1| spliceosomal protein on the X [Danaus plexippus]
Length = 334
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDRVTESLLWELFVQAG----------PVVNVHMPKDRVTQTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +V+R P K A++ F + EA++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDEKVSDTLMWELFVQAG----------PVVNVHMPKDRVTQSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E + A+ NM + G IR+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFLAEDDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P KG A++ + + EA++ I+ N +
Sbjct: 109 SEVDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGFAFINYASFEASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 HLCNRAVSISYA 177
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 34/227 (14%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E K E D +F+GNL V ++ L +EF +FGE+ VRI
Sbjct: 226 KKRKADEEPAAAAKKSKTE--DAPEGASANLFIGNLSWNVDEEWLQREFSEFGELSGVRI 283
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D + R Y+ + S A+ + G I LD
Sbjct: 284 ----VTDRESGRSRGF-------------GYVEYTSAADAAKAMEAKKGTDLDGRTINLD 326
Query: 317 RACP----PRKKLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
A P P++ + A Y + T+FVGNLPF ++ ++++F SV
Sbjct: 327 YAAPRQANPQQDRTQDRARSYGDQTSPESDTLFVGNLPFSATEDALHEVFGA----HGSV 382
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRL 413
+R+ KG YV F + + A N +L R +RL
Sbjct: 383 LGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHGALNGHELEGRAVRL 429
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 24/170 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+I+VGNL + ++ + +EF FG I SV I S D + KG
Sbjct: 232 SIYVGNLLFDITQEDIQREFESFGPIKSVTIAS----DNRGLSKG--------------F 273
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F+S EQ+T A N AV+ G + ++ ++ G + P+ + KT+F+GNL
Sbjct: 274 GYVEFESIEQATAAIEGKNQAVLEGRRLVVNYMNKSQRSPAGAE-PVNEPSKTLFIGNLA 332
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
F++ D ++ +LF D+ + ++ VRV +G A+ F E+A
Sbjct: 333 FEMSDADLNKLF---RDIRNVID-VRVAIDRRTGQPRGFAHADFVDVESA 378
>gi|356542361|ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 958
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKTR 392
D+++TVF+ NLPF+ +EE+ Q F G ++E V + +V + P +G ++ FKT
Sbjct: 495 DLQRTVFISNLPFECDNEEVKQRFSGFGEIEYFVPVLHQVTKRP-----RGTGFLKFKTV 549
Query: 393 EAANLVI 399
EAAN VI
Sbjct: 550 EAANTVI 556
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIID--TKIPRKGAILQKQI 278
E L RT+F+ NLP + + + + F FGEI+ VP++ TK PR L+ +
Sbjct: 493 EDDLQRTVFISNLPFECDNEEVKQRFSGFGEIEYF----VPVLHQVTKRPRGTGFLKFKT 548
Query: 279 NENADSV 285
E A++V
Sbjct: 549 VEAANTV 555
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|357612263|gb|EHJ67888.1| spliceosomal protein on the X [Danaus plexippus]
Length = 259
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDRVTESLLWELFVQAG----------PVVNVHMPKDRVTQTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK-RRNL 404
+V ++ +Y F + ++ +V+R P K A++ F + EA++ I+ N
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 165
Query: 405 KLRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 94/236 (39%), Gaps = 47/236 (19%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E K E +EG+ T+FVGNL V L EF F + R+
Sbjct: 141 KKRKADDEEPAAAKKAKTE---EEGETSSTLFVGNLSWNVDDSVLYDEFKGFDGLTGARV 197
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I D + R Y+ F S + +AA + G +++D
Sbjct: 198 ----ITDRETQRSRGF-------------GYVEFDSVEHAQAAFDKMTGYFLDGRELKID 240
Query: 317 ----RA-------CPPRKKLKGE-DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
RA R K G+ +P D T+FVGNL FD +E + F
Sbjct: 241 FSTGRAKSNDANPAASRAKKYGDVTSPESD---TLFVGNLSFDADEETVSAFF------- 290
Query: 365 SSVEAVRVIRHP-HMRVG--KGIAYVLFKTREAANLVIKRRNLK-LRDRELRLSHA 416
S V V+ +R P M G KG YV F + E + N + R +RL ++
Sbjct: 291 SEVANVKSLRLPTDMESGRPKGFGYVSFYSLEDSKKAFDTLNGQSCAGRNVRLDYS 346
>gi|443898927|dbj|GAC76260.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 379
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R +R+ PPR +L D P + T FVGNL FDV D ++ F S + +VR++
Sbjct: 65 RPERSYPPRDELPLPDKPPF----TAFVGNLSFDVVDADVEDFFA-----PSQLVSVRIV 115
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
H KG YV F++++ + R +L R +R+S A+
Sbjct: 116 TG-HDGKPKGFGYVEFQSQDDLRAALDRSGSQLATRTVRISVAE 158
>gi|307110375|gb|EFN58611.1| hypothetical protein CHLNCDRAFT_10145, partial [Chlorella
variabilis]
Length = 329
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 100/208 (48%), Gaps = 37/208 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T +VGN+ + ++ + + F++ G P+++ +P+ + NE+ +
Sbjct: 23 TCYVGNIDPQANEELIWELFVQAG----------PVVNVYLPK-----DRVTNEH--QSY 65
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G +R+++A R D+ +F+G L
Sbjct: 66 GFVEFRSEEDADYAIKILNMVKVYGKPLRVNKAAQDRNTA--------DVGANLFIGGLD 117
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + V +++R P + KG ++ F + EA++ ++ N +
Sbjct: 118 PEVDEKLLYDTFSAFGVI---VNNPKIMRDPDTGLTKGFGFLSFDSFEASDAALEAMNGQ 174
Query: 406 -LRDRELRLSHA-------QQNCTPSKR 425
L +R L +S+A +++ TP++R
Sbjct: 175 YLMNRPLSISYAFKKDTKGERHGTPAER 202
>gi|189188072|ref|XP_001930375.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187971981|gb|EDU39480.1| RNA-binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 447
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 34/192 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K++L + EI S +I V + P K +N+ A
Sbjct: 127 VWIGNLPWSATKESLRNFLCENSEIKSEQITRVHLPPPTKPANPNWTNKPLNKG----FA 182
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDA---------PLY 333
Y+ F +E + +A + G + + A P + K + ED P +
Sbjct: 183 YVDFSTELAMYTCIALTETKMDGRALLIKNAKSFEGRPDKPKTEQEDGGRGAKGAGKPGH 242
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAYV 387
K VFVGNL FDV E DLE + H HM KG A+V
Sbjct: 243 PPNKRVFVGNLSFDVTKE----------DLEYHYGQAGEVEHIHMATFEDSGKCKGYAWV 292
Query: 388 LFKTREAANLVI 399
F EAA +
Sbjct: 293 TFSDVEAATCAV 304
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TI V NL V L EF + GEI SVR++ L +Q +
Sbjct: 288 KTIIVKNLSWNVDDDWLKTEFEECGEIVSVRVQ---------------LDRQSGRSRG-- 330
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA-CPPR----KKLKGEDAPLYDIKKTV 339
+I F + + AL + G I +D+ PR + K D P + +T+
Sbjct: 331 FGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTESNPRNTQARAAKFGDTP-SEPSQTI 389
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKTREAAN 396
FVGN+ F ++ ++Q F AVR +R P R G KG AYV F+ + A
Sbjct: 390 FVGNVAFSADEDALWQTFADYG-------AVRSVRLPTDRETGQPKGFAYVEFEDQAGAT 442
Query: 397 LVIK--RRNLKLRDRELRLSHAQ 417
+ + L++ R +RL ++Q
Sbjct: 443 AAFEAGKEGLEIGGRPVRLDYSQ 465
>gi|397618570|gb|EJK64953.1| hypothetical protein THAOC_14256 [Thalassiosira oceanica]
Length = 210
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 284 SVH-AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
S+H A S S + AL N GG +R+D A P D ++VFVG
Sbjct: 4 SLHRAMWCLLSLDSVKEALEMNNTEHGGFTLRVDHASPTN-----------DASRSVFVG 52
Query: 343 NLPFDVKDEEI---YQLFCGLNDLE----SSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
NLP+ ++E + ++ + D+ S+V +VR+IR + KGI Y++ +
Sbjct: 53 NLPYAAEEETLRSHFETYLSRFDVNERDGSAVSSVRIIRDKDTQQCKGIGYIMLRDATLV 112
Query: 396 NLVIKRRNLKLRDRELRL 413
+L + K RELR+
Sbjct: 113 SLALGLHESKYMRRELRV 130
>gi|407921246|gb|EKG14398.1| hypothetical protein MPH_08387 [Macrophomina phaseolina MS6]
Length = 1116
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + ++ + K F GEI SVR S+ + N
Sbjct: 720 TLFVTNYPPEADEEYIRKLFKAHGEIISVRFPSLKL------------------NTHRRF 761
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F + Q EAA A + +G N + P K + P+Y+ + VFVGN+
Sbjct: 762 CYVTFGNAQQAEAASKAMHGKSVGRNLMLTAEISDPSIKDR-RHGPIYE-GREVFVGNVD 819
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
V D+E+ L L+ + VRV R+ R GKG+A+V F T + A + N K
Sbjct: 820 MSVTDQEVQDLVSSLDGFVN----VRVPRNLGGR-GKGVAFVEFDTPDNAKKGAEALNAK 874
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVAPAVNSPP 436
+DR LR + A+ P K A A+ + P
Sbjct: 875 EFKDRILRANIAE----PRGSKRHATAIINQP 902
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 32/200 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVG L V + L +EF ++G I R+ I+D + R KG
Sbjct: 264 TVFVGRLSWNVDDQWLGQEFEEYGTIVGARV----IMDGQSGRSKG-------------- 305
Query: 286 HAYIVFKSEQSTEAALAFN-MAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIK 336
+ Y+ F++ ++ +AA+A N I G + LD P +++ L +
Sbjct: 306 YGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLPNPRPANPQPYAQQRAGNFGDQLSEPS 365
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
TVFVGNL F+ ++++ F G D++S +R+ P KG YV F ++A
Sbjct: 366 DTVFVGNLSFNATEDDLSTAFGGCGDIQS----IRLPTDPQSGRLKGFGYVTFSDIDSAK 421
Query: 397 LVIKRRNLKLRDRELRLSHA 416
++ + R RL +
Sbjct: 422 KCVEMNGHFIAGRPCRLDFS 441
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +F+ NL + + L +F K GE+ VRI + + KG
Sbjct: 601 RKVFISNLLFSITEDHLRDKFSKLGEVLDVRI----VKNMAGRSKG-------------- 642
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+AY+ F +E + +AALA + + G + + K P K T+FV NLP
Sbjct: 643 YAYVEFNNESTVQAALAMDREKMEGRPMFISPCVDKAKNPTTFKFPTSLDKHTLFVSNLP 702
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVI 399
FD K+ EI +LF S V+ +R R G KG YV ++ +A+ +
Sbjct: 703 FDAKESEIEELF-------SKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAV 751
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + L F + G + S +I I E +
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKI--------------------IREASSDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + S QS + ALA N + I+++ A P + K + + + I FVG+L
Sbjct: 48 YAFIEYASHQSAQTALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNG 159
Query: 404 LKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
L R +R + S RK AP N+
Sbjct: 160 QWLGSRSIRTNW-------STRKPPAPRENT 183
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 41/234 (17%)
Query: 198 KRKKADNETEDMLVHRK--EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
K++KA+ E + K EE EG ++ +FVGNL + + L +EF FGEI
Sbjct: 206 KKRKAEEAAEPAIKKTKTVEEPAGAEG--IKNLFVGNLSWNIDEDWLRREFEGFGEIVGC 263
Query: 256 RIRSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFK-SEQSTEAALAFNMAVIGGNHI 313
RI I D + R KG Y+ F S + +A + + G +
Sbjct: 264 RI----ITDRETGRGKG--------------FGYVEFATSADAAKAQAEMHQYELDGRPL 305
Query: 314 RLDRACPPRKKLKG---EDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLES 365
+D + P +K G + A Y K+ T+F+GNL FD ++ I ++F ++
Sbjct: 306 NVDFSTPRQKPDAGKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNI-- 363
Query: 366 SVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRNLK-LRDRELRLSHA 416
RV G KG YV F ++E A + N + + R +R+ +A
Sbjct: 364 ----TRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYA 413
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++V +P + + L+ F G + VR+ D+ PR +
Sbjct: 69 TVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQ--DSGKPRG---------------Y 111
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRK-----KLKGEDAPLYDIK--KTV 339
A++VF E + + AL + + ++ + RA PR K K ++ +K +TV
Sbjct: 112 AHVVFDDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTV 171
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
F+ LP++V++ I + CG ++ +VR+ H + KG YV F + + A
Sbjct: 172 FIKQLPYEVEEGTIREALASCG------TITSVRLPIWNHTKKLKGFGYVEFSSEDEALA 225
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTP 422
+R +K+ DR + +S P
Sbjct: 226 AARRSGMKIGDRMVLISLDAAGSAP 250
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA+++ + K+E D+ +FVGNL V ++ L EF FGE+ VRI
Sbjct: 234 QKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRI 293
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA-----LAFNMAVIGGNH 312
+ D R + D+ A FK+++ E L F A
Sbjct: 294 ----VTDRDSGRSRGFGYVEFTNAEDASKA---FKAKKDAEIDGRTINLDFANARQNAGG 346
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRV 372
R DRA K + +P D T+F+GN+ F+ + + + F S+ +R+
Sbjct: 347 AR-DRAQSRAKSFGDQTSPESD---TLFIGNISFNADENAVQETFSS----HGSILGIRL 398
Query: 373 IRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLKLRDRELRL--SHAQQNC 420
P KG YV F + EA + + +L R +RL S +QN
Sbjct: 399 PTDPESGRPKGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQNS 449
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD E + K EG T+F GNL + L + F +F + R+
Sbjct: 239 KKRKADEEIDATPKKAKTEG-------APTLFAGNLSWNIDDNALAEAFKEFEGLVGARV 291
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLD 316
+ D R G + Y+ F++ E +T+A A + G + LD
Sbjct: 292 ----VTD----RDGGRSRG---------FGYVDFETPEAATKAYEAMQGFELDGRPLNLD 334
Query: 317 RA------------CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
A R K G+ + +T+F+GNLPFD E + Q F +
Sbjct: 335 YANTRPAESNPRDRATDRAKKHGDS--VSPESETLFIGNLPFDTDQETVRQFFAEV---- 388
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+ V +VR+ P KG YV F + E A V ++ N
Sbjct: 389 AEVTSVRLPTDPDSGNLKGFGYVSFNSVEDAKTVFQQLN 427
>gi|330922100|ref|XP_003299696.1| hypothetical protein PTT_10747 [Pyrenophora teres f. teres 0-1]
gi|311326521|gb|EFQ92208.1| hypothetical protein PTT_10747 [Pyrenophora teres f. teres 0-1]
Length = 447
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 73/192 (38%), Gaps = 34/192 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K +L + EI S +I V + P K +N+ A
Sbjct: 127 VWIGNLPWSATKDSLRTFLCENSEIKSEQITRVHLPPPTKPANPNWTNKPLNKG----FA 182
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDA---------PLY 333
Y+ F +E + +A + G + + A P + K + ED P +
Sbjct: 183 YVDFSTELAMYTCIALTETKMDGRALLIKNAKSFEGRPDKPKTEQEDGGRGVKGAGKPGH 242
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAYV 387
K VFVGNL FDV E DLE + H HM KG A+V
Sbjct: 243 PPNKRVFVGNLSFDVTKE----------DLEYHYGQAGEVEHIHMATFEDSGKCKGYAWV 292
Query: 388 LFKTREAANLVI 399
F EAA +
Sbjct: 293 TFNDVEAATCAV 304
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 23/231 (9%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA+++ + K+E D+ +FVGNL V ++ L EF FGE+ VRI
Sbjct: 236 QKRKAESDETPVAKKVKKETADEASAESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRI 295
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA-----LAFNMAVIGGNH 312
+ D R + D+ A FK+++ E L F A
Sbjct: 296 ----VTDRDSGRSRGFGYVEFTNAEDASKA---FKAKKDAEIDGRTINLDFANARQNAGG 348
Query: 313 IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRV 372
R DRA K + +P D T+F+GN+ F+ + + + F S+ +R+
Sbjct: 349 AR-DRAQSRAKSFGDQTSPESD---TLFIGNISFNADENAVQETFSS----HGSILGIRL 400
Query: 373 IRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLKLRDRELRL--SHAQQNC 420
P KG YV F + EA + + +L R +RL S +QN
Sbjct: 401 PTDPESGRPKGFGYVQFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQNS 451
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + A+ NM + G IR+++A K L D+ +F+ NL
Sbjct: 57 GFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKALAHNKNL--------DVGANIFIENLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|219115479|ref|XP_002178535.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410270|gb|EEC50200.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 269
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 223 KLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA 282
+L RT+FV +P + + K F + G D V R +P+ +G
Sbjct: 61 QLDRTVFVEGIPYTCTPQEVKKFFTENGVEDIVECR-LPVWQDTGRLRG----------- 108
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKK------LKGEDA-PLYDI 335
+ ++VF +++S + AL N + ++ + A P+ L +D+ P
Sbjct: 109 ---YGHVVFDTKESQQTALQLNGKYLQNRYLTIQAANAPKTSQAQVPSLNSDDSKP---- 161
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
KTV + NL +D + +I ++ + + VRV+RH + KG AYV F++ ++A
Sbjct: 162 SKTVMLNNLSYDASESDIQRVMEAYGAIATG--GVRVVRHSQSQRSKGFAYVEFESIDSA 219
Query: 396 NLVIK 400
++
Sbjct: 220 QKAVQ 224
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
+ +TVFV +P+ +E+ + F N +E VE + R+ +G +V+F T+E+
Sbjct: 62 LDRTVFVEGIPYTCTPQEVKKFFTE-NGVEDIVECRLPVWQDTGRL-RGYGHVVFDTKES 119
Query: 395 ANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNS----PPKKFVLDSRTLGSGN 450
++ L++R L + A P + P++NS P K +L++ + +
Sbjct: 120 QQTALQLNGKYLQNRYLTIQAAN---APKTSQAQVPSLNSDDSKPSKTVMLNNLSYDASE 176
Query: 451 RSNSKVAMSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQKG 492
+V +Y + +G VV+ +S+ KG
Sbjct: 177 SDIQRVMEAYGA-----------IATGGVRVVRHSQSQRSKG 207
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 42/209 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++FVGNLP + K+ L + F G+I+ V S+P KG
Sbjct: 294 KSVFVGNLPFSMTKEWLEQIFSWCGDIERV---SLPTDWESGKIKG-------------- 336
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-------------L 332
A++ F E S E A+ N G +R++ + P L
Sbjct: 337 FAFLDFADEDSAEKAVGKNGEDCEGRDLRVNYSFPKNDNAHSGKGKGGKGKGKGKGHHEL 396
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG--KGIAYVL 388
+ +VFVGNLP+ + E + ++F CG R G +G AY+
Sbjct: 397 GEKSASVFVGNLPWSMTQEWLSEVFGDCG--------SITRCFMPTDRETGNPRGFAYID 448
Query: 389 FKTREAANLVIKRRNLKLRDRELRLSHAQ 417
F T ++A K L R++R+++ Q
Sbjct: 449 FDTEDSAEKATKLSGTDLEGRQIRVNYNQ 477
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 42/223 (18%)
Query: 211 VHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK 270
H +E +D+ K + +FVGNL + +L + F ++G + +V++ P D + K
Sbjct: 227 AHHEEPANEDDDK--KELFVGNLSFHTTEDSLGQAFGEYGTVTNVKL---PQQDGRP--K 279
Query: 271 GAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGED 329
G A++ F + + +AAL A+N G +R++ + G
Sbjct: 280 G--------------FAFVEFATHKEAQAALDAYNGQDFEGRALRINFSGGKPAGAGGPG 325
Query: 330 APLYDIKK-----------TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHP 376
++ T+FVGN+ F + + + F CG ++AVRV
Sbjct: 326 GNQGGFQRGAPSGGDGQSTTLFVGNISFQTTQDSLERHFSKCG------PIKAVRVAMGD 379
Query: 377 HMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQN 419
RV KG A+V F++ E+A ++ RELRL +QQ+
Sbjct: 380 DGRV-KGFAHVEFESPESAQKALEMNGAPCDGRELRLDLSQQS 421
>gi|112983328|ref|NP_001037646.1| spliceosomal protein on the X [Bombyx mori]
gi|109706833|gb|ABG43003.1| spliceosomal protein on the X [Bombyx mori]
Length = 342
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L +V + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDRVTESLLWELFVQSG----------PVVNVHMPKDRVTQTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G +R+++A +K L D+ VF+GNL
Sbjct: 57 GFVEFMGEEDADYAIKVMNMIKLYGKPVRVNKASAHQKNL--------DVGANVFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +V+R P K A++ F + EA++ I+ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKVMRDPETGNSKAFAFINFASFEASDAAIEAMNNQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 41/207 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V + L EF FGE+ VRI + DT R + E ++V A
Sbjct: 3 LFVGNLSWNVDEAWLQSEFESFGELSGVRIMTER--DTGRSRGFGYV-----EYTNAVDA 55
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKG---------------EDA 330
F++++ E I G I LD A P K +G + +
Sbjct: 56 AKAFEAKKGAE---------IDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQAS 106
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D T+FVGNLPFD ++ + +LF + S+ +R+ P KG YV +
Sbjct: 107 PESD---TLFVGNLPFDANEDSVGELFG----EKGSILGIRLPTDPDSGRPKGFGYVQYS 159
Query: 391 TREAANLVIKR-RNLKLRDRELRLSHA 416
+ + A + L R +RL +
Sbjct: 160 SVDEARAAFNELQGADLLGRPVRLDFS 186
>gi|384500250|gb|EIE90741.1| hypothetical protein RO3G_15452 [Rhizopus delemar RA 99-880]
Length = 246
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL + + +LI E + +++ P+++ +P+ Q ++N +
Sbjct: 12 TVYVGNLDERCTE-SLIWELM---------LQAGPVVNVHLPKDRV---TQTHQN----Y 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ N + G +R+++A RK L D+ T+F+GNL
Sbjct: 55 GFVEFLTEEDADYAMRVMNQVRLYGKPVRVNKATSDRKNL--------DVGATLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + V RV R P KG ++ F E+++ I+ + +
Sbjct: 107 PEVDEKLLYDTFSAFGLI---VNTPRVSRDPDTGALKGFGFISFDNFESSDAAIEAMDGQ 163
Query: 406 -LRDRELRLSHA 416
L ++++ +S+A
Sbjct: 164 YLMNKQITISYA 175
>gi|387593127|gb|EIJ88151.1| hypothetical protein NEQG_01595 [Nematocida parisii ERTm3]
gi|387596161|gb|EIJ93783.1| hypothetical protein NEPG_01355 [Nematocida parisii ERTm1]
Length = 316
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 31/206 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIF+ L ++ L + F KFG+ I++ +IPR +
Sbjct: 90 RTIFIKGLNFSATEEDLRELFGKFGD----------IVEVRIPR-------SRDGPGGKG 132
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYD--IKKTVFVG 342
Y+ F+++++ E + N G I +D A ++ G D +Y+ TVF+G
Sbjct: 133 FGYVEFETKEACEKSRELNGTDFNGRSIVVDLARSGQRVGAGADGQKVYNKTDDSTVFLG 192
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR-VG--KGIAYVLFKTREAANLVI 399
N+PFDV E+ L+ L++ E V +R P R G KG A+ ++ E A +I
Sbjct: 193 NIPFDVDHEDF------LSHLKTYAE-VSQVRIPEDRETGRPKGFAFASCESVEEAQKLI 245
Query: 400 KRRNLKLRDRELRLSHAQQNCTPSKR 425
N+ DR +R +++ +P+ R
Sbjct: 246 N-SNIVYMDRNIRAQISERKNSPAPR 270
>gi|349806125|gb|AEQ18535.1| putative protein containing rna recognition ( or rnp domain)
[Hymenochirus curtipes]
Length = 110
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+FVGNLP K+ L F +FG I+SVR RSV + + RK A + ++++ +++
Sbjct: 40 VVFVGNLPADFTKQMLKSLFKEFGPIESVRFRSVARAEASLSRKVATIHRKVHPKRKNIN 99
Query: 287 AYIVFKSEQST 297
AY+V+K E S
Sbjct: 100 AYVVYKDEDSA 110
>gi|300176697|emb|CBK24362.2| unnamed protein product [Blastocystis hominis]
Length = 314
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 212 HRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG 271
HR EE T++VG L +V ++ L + F++FG P++ +P K
Sbjct: 7 HRNEEA---------TLYVGGLDERVDEELLWELFLQFG----------PVVSVSMP-KD 46
Query: 272 AILQKQINENADSVHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGEDA 330
+L K + A+I ++SE E A+ + + G IR++++ +D
Sbjct: 47 KVLNKHME------FAFIEYQSEIDAEYASHVCDNITLYGRKIRVNKS--------NKDR 92
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
P D+ +F+ NL DV ++ I F L + E + + R P + KG A+V +
Sbjct: 93 PTLDVGADLFISNLAPDVTEDMIKTTFSQFGQL--ACEPI-IARDPETNISKGHAFVNYT 149
Query: 391 TREAANLVIKRRNLK-LRDRELRLSHAQQNCTPSKRKDVA 429
+ E+++ VI+ N + R + + +A + T +R A
Sbjct: 150 SFESSDFVIESMNGQYFHGRPIVVQYAYKKGTRGERHGSA 189
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 14/189 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELAGTRI----VTDRESGRSRGFGYVEFVNVEDAVKA 295
Query: 288 YIVFKSEQ--STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ K + + L + A GN +RA K + +P D T+F+GN+
Sbjct: 296 HTAKKDAELDGRKMNLDYANARTNGNANPRERADNRAKSFGDQTSPESD---TLFIGNIS 352
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK-RRNL 404
F + + +LF +++ +R+ P KG YV F + + A ++
Sbjct: 353 FSADENMVQELFSKYG----AIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAEHGA 408
Query: 405 KLRDRELRL 413
L R +RL
Sbjct: 409 DLGGRSIRL 417
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKI-PRKGAILQKQ 277
+++G + + ++VG +P + + + F G I V D K+ P GA
Sbjct: 156 EEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKV--------DCKMRPEDGAF---- 203
Query: 278 INENADSVHAYIVFKSEQSTEAALAFNMAVIGG------NHIRLDRACPPRKKLKGEDAP 331
S A+I F++E + ALAF+ A +G +++ PR+K AP
Sbjct: 204 ------SGIAFITFETEDGAKRALAFDRAAMGDRFLTIQQYVKTTTPFVPRRKTSSGFAP 257
Query: 332 -LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ D V++GNL +D + +I +LF + + +VR+ ++ KG A+V FK
Sbjct: 258 EMVDGYNRVYIGNLAWDTTERDIRKLF-----SDCVINSVRLGKNKETGEFKGYAHVDFK 312
Query: 391 TREAANLVIKRRNLKLRDRELRLSHA 416
+ + +K + R +++ A
Sbjct: 313 DSVSVAIALKLDQQVICGRPVKVCCA 338
>gi|396493610|ref|XP_003844097.1| hypothetical protein LEMA_P017480.1 [Leptosphaeria maculans JN3]
gi|312220677|emb|CBY00618.1| hypothetical protein LEMA_P017480.1 [Leptosphaeria maculans JN3]
Length = 439
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 75/194 (38%), Gaps = 35/194 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K +L + E+ S +I V + P + K +N A
Sbjct: 115 VWIGNLPWSATKDSLRTFLVDNAEMKSEQITRVHLPAPTKPPNPSWTTKPLNRG----FA 170
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKK----------LKGEDAPL 332
Y+ F SE + +A+A + G + + A P + K KG
Sbjct: 171 YVDFSSELAMYSAIALTETKMDGRALLIKNAKSFEGRPDKPKNEDTQDTGRGAKGAVKGA 230
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV------GKGIAY 386
+ K VFVGNL FDV E DLE+ + H HM KG A+
Sbjct: 231 HPPNKRVFVGNLSFDVTKE----------DLEAHYSQCGTVEHIHMATFEDSGKCKGYAW 280
Query: 387 VLFKTREAANLVIK 400
V F +AA +K
Sbjct: 281 VTFGDVDAATCAVK 294
>gi|358379816|gb|EHK17495.1| hypothetical protein TRIVIDRAFT_43079, partial [Trichoderma virens
Gv29-8]
Length = 245
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 36/190 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F G+L V L + F F + R+ + KG +
Sbjct: 1 TLFAGSLAWSVDDNALYQAFESFDGLVGARV---------VTEKGTGRSRGF-------- 43
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA------------CPPRKKLKGEDAPLY 333
Y+ FK +S + A A +GG +I LD A R K G+ L
Sbjct: 44 GYVDFKDAESAQVAYEAMQGQDVGGRNINLDYANARPEGSNPQDRAADRAKKHGD--TLS 101
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
T+FVGNLPFD + + + F N++ ++V +VR+ P KG YV F + E
Sbjct: 102 AESDTLFVGNLPFDTDQDTVTEFF---NEV-AAVTSVRLPTDPDSGNLKGFGYVTFGSVE 157
Query: 394 AANLVIKRRN 403
A ++ +N
Sbjct: 158 DAKAALEAKN 167
>gi|409079223|gb|EKM79585.1| hypothetical protein AGABI1DRAFT_107018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 605
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 107/307 (34%), Gaps = 127/307 (41%)
Query: 226 RTIFVGNLPLKVKKKTLIKE--------FIKFGEIDSVRIRSVP---------------- 261
RTIFVGNLPL+V +K +++ FI +I+S R RSVP
Sbjct: 142 RTIFVGNLPLQVAQKRPMQKQLQRHILSFIPSAKIESTRFRSVPFNTPTSNLSSSTTTTS 201
Query: 262 ------------------------------------IIDTKIPRKGAILQKQINENADSV 285
++T ++ A + ++ + A +V
Sbjct: 202 DTSTHKNPSQRDHDRTRASSWKTKESTDDPKPDEKQFLNTSQKKRIAFINQEFHSTAATV 261
Query: 286 HAYIVFKSE---------------------QSTEAALAFNMAVIGGNHIRLDRACPPRKK 324
HAYIVF + E + +V IR+D
Sbjct: 262 HAYIVFAYPIPQDSRPKNLPPLDPVMDPFVAAKEVVKKADGSVFMDRIIRVDSV------ 315
Query: 325 LKGEDAPL-----------------YDIKKTVFVGNLPFDVKDEEIYQLFCGL------- 360
GE A + D K T+FVGNL F ++ ++ F L
Sbjct: 316 --GEKAKIGATADGEEESEIGSFSDADPKCTLFVGNLDFTSEEGDLRLFFENLMTTERGD 373
Query: 361 -----NDLESS-------VEAVRVIRHPHMRVGKGIAYVLFKTREAAN--LVIKRRNLKL 406
D ES+ V+ VR+I+ ++GKG AYV F RE + L LK
Sbjct: 374 PPPRETDEESTEKKPHTWVKRVRIIKDKETQLGKGFAYVQFIDRECVDTLLTFSPDQLKF 433
Query: 407 RDRELRL 413
R+LR+
Sbjct: 434 AKRKLRV 440
>gi|296804682|ref|XP_002843192.1| nucleolar protein 13 [Arthroderma otae CBS 113480]
gi|238845794|gb|EEQ35456.1| nucleolar protein 13 [Arthroderma otae CBS 113480]
Length = 381
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 27/184 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++ L + F+ K G +DS I IP +G QK + N
Sbjct: 86 VWIGNLPFTATREAL-RTFLTTKSGILDS------EITRIHIP-EGESKQKGVKRNKG-- 135
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP----PRKKLKGED---APLYDIKKT 338
AY+ F S++ + ALA + ++GG + + A P K ED A
Sbjct: 136 FAYVDFASQKVVDLALALSEELVGGRRVLIKDATNFEGRPEKNADQEDGSKAAGNPPSTK 195
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+FVGNL FD E++ F CG +V V V KG A+V F++ E++
Sbjct: 196 IFVGNLSFDTTKEDLEAHFGPCG------TVSHVHVATFEDSGKCKGYAWVEFESTESSQ 249
Query: 397 LVIK 400
++
Sbjct: 250 AAVR 253
>gi|357485153|ref|XP_003612864.1| RNA-binding protein [Medicago truncatula]
gi|355514199|gb|AES95822.1| RNA-binding protein [Medicago truncatula]
Length = 518
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 8 EDNNISAPSSIFTTLFGGIPNESTVAS---SLFSDSNPFKRQHRESQSAEN 55
+++ +SAPSSIF TLF P ++T A+ SLFSD NP+KR+ ++ S EN
Sbjct: 14 QNDTVSAPSSIFNTLFANAPEQTTAAADTVSLFSDDNPYKRKPNQTLSPEN 64
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K G KRK A+ E+ + +G D+E +FVG L V L EF
Sbjct: 158 EEAKPQANGNKRK-AEEESIAPAKKARADGGDEEATT--NVFVGQLSWNVDNDWLKSEFE 214
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV 307
GE+ S R+ V D++ R Y+ F +S+ A+ + +
Sbjct: 215 SCGEVVSARV--VFDRDSQKSRG---------------FGYVEFADLESSAKAIEKDGSE 257
Query: 308 IGGNHIRLDRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLN 361
I G IR++ A + E A +++ K+ T+++G+L F V ++++Y+ F
Sbjct: 258 IDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHG 317
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHA 416
D++S VR+ KG YV F + + A+ +K N ++ R +R+ A
Sbjct: 318 DVQS----VRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFA 369
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 31/236 (13%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K G KRK A+ E+ + +G D+E +FVG L V L EF
Sbjct: 161 EEAKPQANGNKRK-AEEESIAPAKKARADGGDEEATT--NVFVGQLSWNVDNDWLKSEFE 217
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV 307
GE+ S R+ V D++ R Y+ F +S+ A+ + +
Sbjct: 218 SCGEVVSARV--VFDRDSQKSRG---------------FGYVEFADLESSAKAIEKDGSE 260
Query: 308 IGGNHIRLDRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLN 361
I G IR++ A + E A +++ K+ T+++G+L F V ++++Y+ F
Sbjct: 261 IDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHG 320
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHA 416
D++S VR+ KG YV F + + A+ +K N ++ R +R+ A
Sbjct: 321 DVQS----VRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFA 372
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 14/189 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSVH 286
+FVGNL V ++ L +EF FGE+ VRI + D R +G + +N +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRI----VTDRDSGRSRGFGYVEYVNAADAAKA 359
Query: 287 AYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+E + L + N+ DRA + + +P D T+FVGN+P
Sbjct: 360 YNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESD---TLFVGNIP 416
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-L 404
F ++ + +LF ++ +R+ P KG YV F + + A N
Sbjct: 417 FSANEDSVSELFG----QSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGA 472
Query: 405 KLRDRELRL 413
+L R +RL
Sbjct: 473 ELNGRPVRL 481
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDTSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + + + F++ G P+++ +P+ Q +
Sbjct: 14 TIYVGGLDDKVTEPLMWELFVQSG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ ++ F + ++ +++R P KG A++ F + +A++ I+ N +
Sbjct: 109 PEVDEKLLFDTFSAFGVI---LQTPKIMRDPDSGNSKGFAFINFASFDASDASIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|225679309|gb|EEH17593.1| nucleic acid-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 960
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 45/235 (19%)
Query: 216 EGFDDEGKLLR---------TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTK 266
+GF D +LR TI++GNL +V L ++ KFG I +VRI + D++
Sbjct: 751 QGFRDNTSILRSNPEVKPNETIYIGNLFFEVTADDLKRDLSKFGNILAVRI----VYDSR 806
Query: 267 IPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKL 325
+G AY+ F S + EAA+ NM + G + ++ +
Sbjct: 807 GMSRG--------------FAYVQFDSIDAAEAAINEMNMTIYEGRRVVVNYSS------ 846
Query: 326 KGEDAPL----YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG 381
+G P + +T+F+GNL F++ D E+ +LF + + V VRV
Sbjct: 847 RGSANPTPTRSNEPTRTLFIGNLSFEMSDRELNELFKDIKN----VTDVRVSVDRRTGQP 902
Query: 382 KGIAYVLF---KTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
+G A+ F ++ +AA ++K + R L S + ++ T + +DV N
Sbjct: 903 RGFAHADFLDVESAQAAFEILKDKAPYGRPLRLDYSFSSRDNTVDRLRDVGSGSN 957
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSVH 286
+FVGNL V ++ L +EF FGE+ VRI + D R +G + +N +
Sbjct: 304 LFVGNLSWNVDEEWLRQEFESFGELSGVRI----VTDRDSGRSRGFGYVEYVNAADAAKA 359
Query: 287 AYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+E + L + N+ DRA + + +P D T+FVGN+P
Sbjct: 360 YNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESD---TLFVGNIP 416
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-L 404
F ++ + +LF ++ +R+ P KG YV F + + A N
Sbjct: 417 FSANEDSVSELFG----QSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNGA 472
Query: 405 KLRDRELRLSHA 416
+L R +RL +
Sbjct: 473 ELNGRPVRLDFS 484
>gi|427791903|gb|JAA61403.1| Putative rna-binding protein sart3 rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 598
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 32/198 (16%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K +RT+F+ NL V++ + + F + GEI+ +R+ + D K KG
Sbjct: 428 DPLKEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRL----VRDYKGRSKG-------- 475
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
Y+VF QS EAAL + + G + + + C R + + K +
Sbjct: 476 ------FGYLVFTHMQSVEAALKRDRTPVNGRPVFVSK-CNERNQFRFRTGM---EKNKL 525
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI--RHPHMRVGKGIAYVLFKTREAANL 397
FV +PF V ++E+ +LF +L + VR++ R+ H KGIAYV + +A +
Sbjct: 526 FVKGIPFSVTEKELEELFGKYGEL----KGVRLVTYRNGH---SKGIAYVEYANETSATV 578
Query: 398 -VIKRRNLKLRDRELRLS 414
+++ + + D L+++
Sbjct: 579 ALVQTDGMAMGDHTLQVA 596
>gi|449542314|gb|EMD33293.1| hypothetical protein CERSUDRAFT_117920 [Ceriporiopsis subvermispora
B]
Length = 478
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R DR+ PPR+ L P Y T F+GNLPFD+ D ++ F G + ++V++I
Sbjct: 56 RPDRSGPPREDLPLPTEPPY----TAFIGNLPFDLTDGDLEDYFAG-----QATKSVKII 106
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
+ R KG Y+ F + + + L R +R+S A+
Sbjct: 107 KDRDDRP-KGFGYIEFAELDGLKEALAKSGTTLAGRTIRVSVAE 149
>gi|401623907|gb|EJS41986.1| nop13p [Saccharomyces arboricola H-6]
Length = 401
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E R+ I +PR A K N +
Sbjct: 125 VWIGNLSFDTTKDDLVRFFIAKTKDNEDGKSRVAEHDITRLSMPRVAA---KNSNCMRNK 181
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKK---LKGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + + A P K ++ P +
Sbjct: 182 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYAGRPDKDDFVAMSKNPP----SR 237
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 238 ILFVGNLSFDVTDDLLKKHFQHCG------DIIKIRMATFEDSGKCKGFAFIDFKNEEGS 291
Query: 396 NLVIKRRNL-KLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKF 439
+K ++ K+ R LR+ + + RK V + P+ F
Sbjct: 292 TNALKDKSCRKIAGRPLRMEYGEDRSKRQVRKKVENVTHDKPRSF 336
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 31/236 (13%)
Query: 188 EEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFI 247
EE K G KRK A+ E + +G D+E +FVG L V L EF
Sbjct: 161 EEAKPQTNGNKRK-AEEEPAAPAKKARADGGDEEATT--NVFVGQLSWNVDNDWLKSEFE 217
Query: 248 KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV 307
GE+ S R+ V D++ R Y+ F S+ A+ + +
Sbjct: 218 SCGEVVSARV--VFDRDSQKSRG---------------FGYVEFADLGSSAKAIEKDGSE 260
Query: 308 IGGNHIRLDRACPPRKKLKGED-APLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLN 361
I G IR++ A + E A +++ K+ T+++G+L F V ++++Y+ F
Sbjct: 261 IDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHG 320
Query: 362 DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHA 416
D++S VR+ KG YV F + + A +K N ++ R +R+ A
Sbjct: 321 DVQS----VRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRVDFA 372
>gi|17530817|ref|NP_511058.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|7290689|gb|AAF46136.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|68051249|gb|AAY84889.1| RE50839p [Drosophila melanogaster]
gi|220952204|gb|ACL88645.1| Spx-PA [synthetic construct]
Length = 347
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q+++ +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRV---TQMHQG----Y 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + + NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|343427842|emb|CBQ71368.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 549
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R +R+ PPR++L D P + T FVGNL FDV + ++ F S +VR++
Sbjct: 65 RPERSYPPREELPLPDKPPF----TAFVGNLSFDVMEADVEDFFA-----PSKTVSVRIV 115
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
H KG YV F++++ + R +L R +R+S A+
Sbjct: 116 TG-HDGKPKGFGYVEFQSQDDLRAALDRSGSQLASRTVRISVAE 158
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG+L V L +EF GE+ S R+ I D + R
Sbjct: 254 TLFVGSLSWNVDDDMLKEEFKFCGEVVSARV----ITDRETGRSKGF------------- 296
Query: 287 AYIVFKSEQSTEAALAFNM-AVIGGNHIRLD---------RACPPRKKLKGEDAPLYDIK 336
Y+ F S E A A A I G I++D + KK +P D
Sbjct: 297 GYVDFASPADAEKAHAEKQGAFIDGRQIKVDFSTGKSNNNDSADRAKKFGDVTSPESD-- 354
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKTRE 393
T+FVGNLPFD DE++ F G SV ++ +R P + KG YV F + E
Sbjct: 355 -TLFVGNLPFDA-DEDVVSEFFG------SVAEIKSLRLPTDQESGRRKGFGYVSFNSVE 406
Query: 394 -AANLVIKRRNLKLRDRELRLSHA 416
A + + + R RL ++
Sbjct: 407 DAKSAFTQLSGQSINGRPCRLDYS 430
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D K RT FV NL + + + + F K GE+ +R+ V I K KG
Sbjct: 766 DPDKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRL--VKTIKGK--SKG-------- 813
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT- 338
+AY+ FK E AL + I G + + + C R + K + ++K
Sbjct: 814 ------YAYVEFKDELGVLEALKLDRTPIEGRPMFVSK-CEDRSQKKAQFKFSTAMEKNK 866
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT-REAA 395
+F+ NLPF + + Q+F S V+ +R R G KG+AYV F+ ++AA
Sbjct: 867 LFIKNLPFTCSKDALIQIF-------SEHGPVKEVRMVTYRSGAPKGLAYVEFEDEQDAA 919
Query: 396 NLVIKRRNLKLRDRELR--LSHAQQNCTP 422
V+K LK+ D E+ +S+ Q TP
Sbjct: 920 KAVMKTDGLKIGDHEIEVAISNPPQRGTP 948
>gi|452820612|gb|EME27652.1| splicing factor 3B subunit 4 [Galdieria sulphuraria]
Length = 265
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + ++ G P+ IPR Q Q +
Sbjct: 24 TLYVGNLDERVSEELLWELMVQVG----------PVKHVYIPRDRITGQTQ-------GY 66
Query: 287 AYIVFKSEQ-STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK+E + A NM + +RL +A ++ + DI +FVGNL
Sbjct: 67 GFVEFKNEMDAIYATKVLNMVRVYAKPLRLQQASTDKRSM--------DIGANLFVGNLS 118
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+V ++ +Y F + +E ++R P KG ++ F + EA++ I+ N
Sbjct: 119 QEVDEKLLYDTFSAFGAI---IETPHIMRDPETGESKGYGFIKFDSFEASDAAIETMN 173
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 27/182 (14%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
DE + TIFVG L + + L EF G + S R+ I KG +
Sbjct: 155 DESEEPATIFVGRLSWSIDDEWLKTEFEPIGGVLSARV---------IYEKGTDRSRG-- 203
Query: 280 ENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY----- 333
+ Y+ FK++ E A+ I G I D + G+ A +
Sbjct: 204 ------YGYVDFKNKTFAEKAIKEMQGKEIDGRPINCDMSTSKPASNGGDRAKKFGDTPS 257
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
+ +T+F+GNL FD + IY++F ++ S VR+ HP KG YV + E
Sbjct: 258 EPSETLFLGNLSFDADRDNIYEVFSKYGEIIS----VRIPTHPETEQPKGFGYVQYGDVE 313
Query: 394 AA 395
+A
Sbjct: 314 SA 315
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 34/203 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F K G + S +I I E +
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI--KKTVFVG 342
+A+I + + Q+ AL A N V I+++ A P + P DI +FVG
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRVFLDKEIKVNWATSPG------NTPKTDISSHHHIFVG 100
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKR 401
+L +++ E + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 101 DLSPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 156
Query: 402 RNLKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 157 NGQWIGSRSIRTNWSTRKLPPPR 179
>gi|195340414|ref|XP_002036808.1| GM12470 [Drosophila sechellia]
gi|194130924|gb|EDW52967.1| GM12470 [Drosophila sechellia]
Length = 299
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+ G L KV + L + F++ G P+++ +P+ Q +
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAG----------PVVNVHMPKDRVTQMHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + + NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R P K A++ F + EA++ + N +
Sbjct: 109 VEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPISVSYA 177
>gi|256270769|gb|EEU05930.1| Nop13p [Saccharomyces cerevisiae JAY291]
Length = 403
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 241
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 295
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + + RK V
Sbjct: 296 ALKDKSCRKIAGRPLRMEYGEDRSKRQVRKKV 327
>gi|349580766|dbj|GAA25925.1| K7_Nop13p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 403
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 241
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 295
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + + RK V
Sbjct: 296 ALKDKSCRKIAGRPLRMEYGEDRSKRQVRKKV 327
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 79/204 (38%), Gaps = 31/204 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VG L V L E FGE+ S R++ + T +G
Sbjct: 215 IWVGQLSWNVDNDWLKSEMEVFGEVTSARVQ---LDRTSGKSRG--------------FG 257
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK----TVFVG 342
Y+ F + + + A + G IR+D + P + D + T+F+G
Sbjct: 258 YVDFATAAAAKKAFDEGQGKEVDGRAIRIDLSTPKGDVTENRAKKFNDQRSAPSSTLFIG 317
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR- 401
NL FDV +++++ F V VR+ + P KG YV F +E+A I
Sbjct: 318 NLSFDVSEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDAM 373
Query: 402 RNLKLRDRELRLSHAQQNCTPSKR 425
+L R LRL TP R
Sbjct: 374 TGQELAGRPLRLDF----STPRDR 393
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL V + + F + GE+ VR+ P D+ P+
Sbjct: 313 TLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDP--DSGRPKG---------------F 355
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F +++S +AA+ A + G +RLD + P
Sbjct: 356 GYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTP 390
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VG L V + L E FGE+ S R++ + T +G
Sbjct: 205 IWVGQLSWNVDNEWLKSEMEAFGEVTSARVQ---LDRTTGKSRG--------------FG 247
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK-----TVFV 341
Y+ F + + + A + G IR+D + P + + A ++ ++ T+F+
Sbjct: 248 YVDFATAAAAKKAFEEGQGKEVDGRAIRIDLSTP-KGDVTDNRAKKFNDQRSAPSSTLFI 306
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GNL FD+ +++++ F V VR+ + P KG YV F +E+A I
Sbjct: 307 GNLSFDISEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAIDA 362
Query: 402 -RNLKLRDRELRLSHA 416
+L R LRL +
Sbjct: 363 MTGQELAGRPLRLDFS 378
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + + + F + GE+ VR+ P D+ P+
Sbjct: 303 TLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDP--DSGRPKG---------------F 345
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F +++S +AA+ A + G +RLD + P
Sbjct: 346 GYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTP 380
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|296412166|ref|XP_002835797.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629590|emb|CAZ79954.1| unnamed protein product [Tuber melanosporum]
Length = 418
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 30/159 (18%)
Query: 217 GFDDEGKLLRT--IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAIL 274
GF D KL T +++GNL VK++ L EF FG I SV+I I D + KG
Sbjct: 155 GFGDR-KLTPTKVVYIGNLQFDVKEEALRDEFKTFGPILSVKI----IYDARNMSKG--- 206
Query: 275 QKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
Y+ F++ EQ+T A + AV+ G + + P G + P
Sbjct: 207 -----------FGYVEFETVEQATSAIENAHNAVLMGRRMNVQYVHRPTTGANGFNEP-- 253
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRV 372
KT+F+GNL FD+ D + +LF +D+ V+ VR+
Sbjct: 254 --SKTLFIGNLSFDMTDADFDRLF---SDIPGCVD-VRI 286
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 34/202 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++FVG LP V L +EF KFG+I+S + ++ +Q +
Sbjct: 4 SVFVGGLPFDVDNDRLQQEFAKFGDIESAIV---------------MMDRQTGNSRG--F 46
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE---------DAPLYDIK 336
Y+ F + EQ+ +A + + G +IR A P+ K + D P +
Sbjct: 47 GYVHFATHEQAKKAKEEMDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFGDKPS-EPS 105
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
T+FVGNL + ++ ++ LF E V+ VR+ KG YV F+ E A
Sbjct: 106 STLFVGNLSWSATEDAVWGLFN-----EYGVKNVRLPTEFETGRPKGFGYVEFEDIEGAK 160
Query: 397 LVIKR-RNLKLRDRELRLSHAQ 417
+ +L R +RL ++Q
Sbjct: 161 KAYEALAGAELDGRNIRLDYSQ 182
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DD G+L FVGNLP + L + F + G +D +I I K
Sbjct: 107 DDPGRL----FVGNLPYTYTSEELAQVFAEAGRVDDAQI---------------IYDKVT 147
Query: 279 NENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY---- 333
N + A++ + E++ +A F+ A++GG R++ PR GE +
Sbjct: 148 NRSRG--FAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPR---GGERRTVTMAGR 202
Query: 334 ---DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
D ++ GNL + V+ + + +F G L + RVI +G +V F+
Sbjct: 203 RRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDA----RVIFERETGRSRGFGFVSFR 258
Query: 391 TREAANLVIKRRN-LKLRDRELRLSHAQQ 418
T E A ++ + ++L R LRLS A+Q
Sbjct: 259 TAEDAQAALEALDGVELEGRPLRLSLAEQ 287
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F GNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 235 LFAGNLSWNVDEEWLRSEFEEFGELVGARI----VTDRESGRSRGFGYVEFANVEDAVKA 290
Query: 288 YIVFKSEQSTEAALAFNMAVI----GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ K + L + A GGN +RA K + +P D T+F+GN
Sbjct: 291 HAAKKDAELDGRKLNLDFANARTNAGGNP--RERADSRAKSFGDQTSPESD---TLFLGN 345
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR- 402
LPF + + +LF S+ +R+ P KG YV F + + A ++
Sbjct: 346 LPFSADENAVQELFS----KHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEY 401
Query: 403 NLKLRDRELRL 413
L R +R+
Sbjct: 402 GADLGGRAIRI 412
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNLP + + + F K G I +R+ + P D+ P+
Sbjct: 340 TLFLGNLPFSADENAVQELFSKHGSILGIRLPTDP--DSGRPKG---------------F 382
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S AAL A A +GG IR+D + P
Sbjct: 383 GYVQFSSVDEARAALEAEYGADLGGRAIRIDFSTP 417
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFGTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 17/239 (7%)
Query: 185 AKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIK 244
AK E +K +++KA++E E++ +K + +EG L F+GNL V ++ L
Sbjct: 191 AKNTEAEKPSSKSQKRKAEDEEEEVTAPKKTKVDSNEGGNL---FIGNLSWNVDEEWLRS 247
Query: 245 EFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFN 304
EF +FGE+ VRI + D R + AD+ A+ K + L +
Sbjct: 248 EFEEFGELAGVRI----VTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVD 303
Query: 305 MAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLE 364
A N +RA + + +P D T+F+GN+ F + I + F
Sbjct: 304 FANGRSNAAPKERAQSRAQNFGDQTSPESD---TLFIGNIAFSANENMISEAFA----EH 356
Query: 365 SSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN---LKLRDRELRLSHAQQNC 420
S+ VR+ P KG YV F + + A + N L R L S +QN
Sbjct: 357 GSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQNS 415
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 31/202 (15%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+ T+FVG L + + L KEF G + R+ ++++ +
Sbjct: 125 ITTLFVGRLSWSIDDEWLKKEFEHIGGVVGARV---------------MMERATGRSRG- 168
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRAC--PPRKKLKGED-APLYDIKK--- 337
+ Y+ F ++ S E AL I G I +D + P + D A Y K+
Sbjct: 169 -YGYVDFDNKASAEKALEEMQGKEIDGRPINVDMSNSKPAAPAARNNDRASQYGDKRSPP 227
Query: 338 --TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
T+F+GNL F + +++LF +V +VR+ HP KG YV F + + A
Sbjct: 228 SDTLFLGNLSFQADRDTLFELFS----KHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEA 283
Query: 396 NLVIKRRNLKLRD-RELRLSHA 416
++ N + D R +RL ++
Sbjct: 284 TGALEALNGEYVDNRPIRLDYS 305
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + + TL + F K G + SVRI + P +T+ P+
Sbjct: 230 TLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHP--ETEQPKG---------------F 272
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP 320
Y+ F S +++T A A N + IRLD + P
Sbjct: 273 GYVQFSSVDEATGALEALNGEYVDNRPIRLDYSTP 307
>gi|330443708|ref|NP_014224.2| Nop13p [Saccharomyces cerevisiae S288c]
gi|347595682|sp|P53883.2|NOP13_YEAST RecName: Full=Nucleolar protein 13
gi|151944364|gb|EDN62642.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
gi|190409156|gb|EDV12421.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|323331909|gb|EGA73321.1| Nop13p [Saccharomyces cerevisiae AWRI796]
gi|329138963|tpg|DAA10376.2| TPA: Nop13p [Saccharomyces cerevisiae S288c]
gi|392296819|gb|EIW07920.1| Nop13p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 403
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 241
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 295
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + + RK V
Sbjct: 296 ALKDKSCRKIAGRPLRMEYGEDRSKRQVRKKV 327
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNR 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIASRSIRTNWSTRKLPPPR 179
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI R+ P + KG +
Sbjct: 62 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDP---QTMKSKG--------------YG 104
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDAPL-YD--------I 335
++ F + E+A+ A N +G IR + A PP K + PL +D
Sbjct: 105 FVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPT 164
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
TV+ G L + +E + + F S++ +RV + KG A++ F T+E+A
Sbjct: 165 NCTVYCGGLTNGLTEELMQKTFSPFG----SIQEIRVFKD------KGYAFIRFSTKESA 214
Query: 396 -NLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
+ ++ N + + ++ S +++ P+ + A++S
Sbjct: 215 THAIVAVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSS 254
>gi|317029450|ref|XP_001391615.2| pre-mRNA splicing factor (Prp24) [Aspergillus niger CBS 513.88]
Length = 1302
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 35/197 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P ++ + F + GEI ID + P + N
Sbjct: 912 TVFVTNFPATADEQYIRDLFREHGEI----------IDIRFP--------SLKYNTHRRF 953
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ +A + A +G G H+ + P R++ + P+Y+ + + V NL
Sbjct: 954 CYVQFKTAGEAYSATQLDGATVGNGLHLVAKISDPTRRQDR--QGPMYE-GREIHVSNLD 1010
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTRE--AANLVIK 400
+ ++++ +LF +VE VR+ R +V KG YV+F ++E A+LV+
Sbjct: 1011 WKASEQDVEELFLRFG----TVELVRIPR----KVDGGSKGFCYVVFSSKEEAEASLVMH 1062
Query: 401 RRNLKLRDRELRLSHAQ 417
+ + R ++LS Q
Sbjct: 1063 EQQFRSRPLHVKLSTPQ 1079
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G P++ +P+ Q
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAG----------PVVSVNMPKDRVTSSHQ-------GF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F E+ + A+ NM + G I++++A K + D+ VFVGNL
Sbjct: 57 GFIEFMGEEDADYAIKIMNMIKLYGKPIKVNKASAHEKNM--------DVGANVFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ ++ F + ++ +++R KG A+V F + EA++ I+ N +
Sbjct: 109 PEVDEKLLFDTFSAFGVI---LQVPKIMRDAETGXSKGFAFVNFASFEASDSAIEAMNGQ 165
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +S+A + T +R A
Sbjct: 166 FLCNRAITVSYAFKKDTKGERHGTA 190
>gi|259149184|emb|CAY82426.1| Nop13p [Saccharomyces cerevisiae EC1118]
Length = 403
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 241
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 295
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + + RK V
Sbjct: 296 ALKDKSCRKIAGRPLRMEYGEDRSKRQVRKKV 327
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 40/220 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI R+ P + KG +
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDP---QTLKSKG--------------YG 99
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDAPL-YD--------I 335
++ F + E+A+ A N +G IR + A PP K + PL +D
Sbjct: 100 FVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPT 159
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
TV+ G L + +E + + F S++ +RV + KG A++ F T+E+A
Sbjct: 160 NCTVYCGGLTNGLTEELMQKTFSPFG----SIQEIRVFKD------KGYAFIRFSTKESA 209
Query: 396 -NLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
+ ++ N + + ++ S +++ P+ + A++S
Sbjct: 210 THAIVAVHNTDINGQTVKCSWGKESGDPNNAQQTGQALSS 249
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|198425590|ref|XP_002119350.1| PREDICTED: similar to splicing factor 3b, subunit 4 [Ciona
intestinalis]
Length = 375
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ G + + T +P K + +
Sbjct: 14 TVYVGGLDEKVAEPLLWELFLQAGVV----------VSTHMP-------KDRISGSHQGY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L D+ +F+GNL
Sbjct: 57 GFVEFLAEEDADYAIKILNMIKLYGKPIRVNKASSHQKNL--------DVGANLFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P KG A++ F + EA++ ++ N +
Sbjct: 109 PEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFEASDAAMEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 HLCNRPISISYA 177
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGNLP L F + G +D V+ I+ +I + +
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQ----------------IIYDKITDRSRGFAF 153
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPR-------------KKLKGEDAPLYD 334
+ +E++ +A FN A++GG +R++ PR L+ D D
Sbjct: 154 VTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVD----D 209
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
V+ GNL + V+ + + F G + + RVI +G +V F T +
Sbjct: 210 GTYKVYAGNLGWGVRADALKTAFEG----QPGLVGARVIFERDTGRSRGFGFVSFHTIQD 265
Query: 395 ANLVIKRRN-LKLRDRELRLSHAQQN----CTPS 423
A ++ + ++L R LRLS A QN TPS
Sbjct: 266 AKAALQAMDGVELDGRPLRLSLAAQNPPAGSTPS 299
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 42/214 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGNLP L F + G +D V+ I+ +I + +
Sbjct: 110 IYVGNLPYTFTAAELTAAFSEAGSVDDVQ----------------IIYDKITDRSRGFAF 153
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPR-------------KKLKGEDAPLYD 334
+ +E++ +A FN A++GG +R++ PR L+ D D
Sbjct: 154 VTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVD----D 209
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
V+ GNL + V+ + + F G + + RVI +G +V F T +
Sbjct: 210 GTYKVYAGNLGWGVRADALKTAFEG----QPGLVGARVIFERDTGRSRGFGFVSFHTIQD 265
Query: 395 ANLVIKRRN-LKLRDRELRLSHAQQN----CTPS 423
A ++ + ++L R LRLS A QN TPS
Sbjct: 266 AKAALQAMDGVELDGRPLRLSLAAQNPPAGSTPS 299
>gi|397629333|gb|EJK69314.1| hypothetical protein THAOC_09441 [Thalassiosira oceanica]
Length = 407
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 34/197 (17%)
Query: 219 DDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQ 275
DD KL T+FV LP + + F + G D ++IR DT R
Sbjct: 179 DDVAKLQSVDHTVFVEGLPFSASEDDVRSFFAQNGCDDILQIRLPRWQDTGRLRG----- 233
Query: 276 KQINENADSVHAYIVFKSEQSTEAALA--FNMAVIGGNHIRLDRACPPRK------KLKG 327
++VF S ++ AL+ N +G ++ + A PR L G
Sbjct: 234 ----------FGHVVFASTETRSRALSDEVNGKNLGSRYVTVKEANAPRAGTTAGASLGG 283
Query: 328 EDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVE-AVRVIRHPHMRVGKGI 384
+ KTV++ NLPFD +++I ++F CG VE +R+ R+ KG
Sbjct: 284 KARQQPKGCKTVYIRNLPFDATEDQILEVFRTCG-----KVVEGGIRIARNHVTGQSKGF 338
Query: 385 AYVLFKTREAANLVIKR 401
Y FK EAA ++R
Sbjct: 339 CYCEFKNEEAAYSAVQR 355
>gi|358368612|dbj|GAA85228.1| pre-mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1303
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 35/197 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P ++ + F + GEI ID + P + N
Sbjct: 913 TVFVTNFPATADEQYIRDLFREHGEI----------IDIRFP--------SLKYNTHRRF 954
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ +A + A +G G H+ + P R++ + P+Y+ + + V NL
Sbjct: 955 CYVQFKTAGEAYSATQLDGATVGNGLHLVAKISDPTRRQDR--QGPMYE-GREIHVSNLD 1011
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTRE--AANLVIK 400
+ ++++ +LF +VE VR+ R +V KG YV+F ++E A+LV+
Sbjct: 1012 WKASEQDVEELFLRFG----TVELVRIPR----KVDGGSKGFCYVVFSSKEEAEASLVMH 1063
Query: 401 RRNLKLRDRELRLSHAQ 417
+ + R ++LS Q
Sbjct: 1064 EQQFRSRPLHVKLSTPQ 1080
>gi|324505664|gb|ADY42430.1| Cytoplasmic polyadenylation element-binding protein 1 [Ascaris
suum]
Length = 358
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 28/226 (12%)
Query: 195 VGEKRKKADNETEDMLVHRKEEG--FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+G + D + E VH G E R IF+G +P V + T+ F KFGE+
Sbjct: 125 MGMTNETGDRDAEGEKVHSSPFGCYMQPEEIYSRKIFIGGVPTDVTQDTVRATFSKFGEL 184
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNH 312
ID P G+ L++ + + +I++ E+S + ++ + G +
Sbjct: 185 ---------FIDWPKPSNGSTLKR--GGDCPLGYLFIIYMEERSVQKLMSSCYQMDGKAY 233
Query: 313 IRLDRACPPRKKLKGEDAPLYDIK------------KTVFVGNLPFDVKDEEIYQLFCGL 360
+ + +K ++ L DIK +TVF+G +P + EE+ + GL
Sbjct: 234 LLMSSQTVKQKPVEVRPWRLSDIKYEPYSDLQIDTLRTVFIGAMPRPTRAEELADVLSGL 293
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
V + P +R KG A V F T +K + + L
Sbjct: 294 F---GPVCYACIHVDPELRYPKGAARVTFATEAGFIAALKAKFVHL 336
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F K G + S +I I E +
Sbjct: 7 KTLYVGNLDGSVSEDLLIALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N V I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAATTALTAMNKRVFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L +EF G + S R+ I+++ ++ +
Sbjct: 197 TLFVGRLSWNIDDSWLKREFEHIGGVISARV---------------IMERATGKSRG--Y 239
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD---------RACPPRKKLKGEDAPLYDIK 336
Y+ F+++ + E AL I G I LD R+ R K G+ +
Sbjct: 240 GYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTNDRAKQYGDSQSA--LS 297
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
T+FVGNL F+ + ++ +F + V + RV HP + KG YV F + + A
Sbjct: 298 DTLFVGNLSFNANRDNLFTVFGEYGN----VISCRVPTHPDTQQPKGFGYVQFSSVDEAK 353
Query: 397 LVIKRRNLK-LRDRELRL 413
++ N + + R RL
Sbjct: 354 AALEALNGEYIEGRPCRL 371
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
D + L T+FVGNL + L F ++G + S R+ + P DT+ P+
Sbjct: 291 DSQSALSDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHP--DTQQPKG-------- 340
Query: 279 NENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N I G RLD + P
Sbjct: 341 -------FGYVQFSSVDEAKAALEALNGEYIEGRPCRLDFSTP 376
>gi|67605110|ref|XP_666661.1| cutinase negative acting protein [Cryptosporidium hominis TU502]
gi|54657695|gb|EAL36429.1| cutinase negative acting protein [Cryptosporidium hominis]
Length = 475
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 40/196 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++ GNLP ++ + F + G I+ V + S D
Sbjct: 271 REVYCGNLPYSCTEEEIRGLFEECGSIERVSVLS-----------------------DKG 307
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP---PRKKLKGEDAPLYDIKKTVFVG 342
A+I F+ E+ ++A+ +N G +R++ + P G P +V V
Sbjct: 308 CAFITFEQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGP------SVIVR 361
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
N+PF DE I F CG+ V+ V + R+ +G A V F+ E +K
Sbjct: 362 NIPFSSDDESIKSFFNGCGV------VKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALK 415
Query: 401 RRNLKLRDRELRLSHA 416
+ RE+ + A
Sbjct: 416 LSGTSMNGREVTIEIA 431
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK +ET+D +K+ D+E T+FVG L + + L +EF G + R+
Sbjct: 269 KRKSDASETQDSKRTKKQ---DEEPA---TLFVGRLSWNIDDEWLQREFEPLGGVTGARV 322
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD 316
I +K ++ + Y+ F+++ + AL + I G I LD
Sbjct: 323 ---------------IYEKASGKSRG--YGYVDFETKSQAQHALKEYQGREIDGRPINLD 365
Query: 317 ------RACPPR--KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVE 368
R PR + + D P T+F+GNL F+ + + +Y +F V
Sbjct: 366 MSESKPRPSNPRFDRAKQFGDVPSAP-SSTLFIGNLSFNAQRDNLYDIFGEYG----RVV 420
Query: 369 AVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN---LKLRDRELRLSHAQQNCT-PSK 424
+ R+ HP + KG Y+ F T + A ++ N ++ R L S ++N PS
Sbjct: 421 SCRMPTHPDTQQPKGFGYIEFSTVDEAKAALEALNGEYVEGRPCRLDFSTPRENSNRPSP 480
Query: 425 R-KDVAPAVNSPPK 437
R + PA S PK
Sbjct: 481 RPQGRQPARPSQPK 494
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + S R+ I+++ ++ +
Sbjct: 199 TLFVGRLSWSIDDEWLRREFEPVGGVISARV---------------IMERSTGKSRG--Y 241
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLD------RACPP---RKKLKGE--DAPLYD 334
Y+ F S+ + E AL + + G I LD A P R K G+ AP
Sbjct: 242 GYVDFDSKSAAEKALQEYQGKELDGRPINLDMSTGKPHASNPNTDRAKQFGDVPSAP--- 298
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
T+FVGNL F+ + + ++ F +V + R+ HP + KG YV F + +
Sbjct: 299 -SDTLFVGNLSFNAERDSLFNTFGEYG----TVVSCRIPTHPDTQQPKGFGYVQFSSVDE 353
Query: 395 ANLVIKRRNLKLRD-RELRL 413
A ++ N + D R RL
Sbjct: 354 AKAALEALNGEYLDGRACRL 373
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL ++ +L F ++G + S RI + P DT+ P+
Sbjct: 301 TLFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHP--DTQQPKG---------------F 343
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N + G RLD + P
Sbjct: 344 GYVQFSSVDEAKAALEALNGEYLDGRACRLDFSTP 378
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L V + L EF G + S R+ I+++ + + +
Sbjct: 150 TLFVGRLSWSVDDEWLKNEFAPIGGVVSARV---------------IMERGTDRSRG--Y 192
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDR--------ACPPRKKLKGEDAPLYDIKK 337
Y+ F+ E AL I G I +D A R K G D P +
Sbjct: 193 GYVDFEDISYAEKALKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKKFG-DVP-SEPSD 250
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAAN 396
T+F+GNL FD + +Y++F ++ S VR+ HP KG YV + T +A
Sbjct: 251 TLFLGNLSFDADRDNLYEIFGKFGEIIS----VRIPTHPETEQPKGFGYVQYTNTEDAKK 306
Query: 397 LVIKRRNLKLRDRELRLSHA 416
+ + + DR +RL +
Sbjct: 307 ALDALQGESINDRPVRLDFS 326
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ L F + G + S +I I E +
Sbjct: 8 KTLYVGNLDTSVTEELLCTLFSQMGTVKSCKI--------------------IRETSIDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
A+I + + QS + ALA N + IR++ A + K + + + I FVG+L
Sbjct: 48 FAFIEYANHQSAQTALAAMNKRMFLKKEIRVNWATSAGNQPKTDTSQHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
++ E + + F ++ + R++R P +G A+V F K EA N +
Sbjct: 104 SPEIDTETLREAFAPFGEISN----CRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNG 159
Query: 404 LKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
L R +R + S RK AP NS
Sbjct: 160 QWLGSRSIRTNW-------STRKPPAPRENS 183
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ L+ F K G + S +I I E +
Sbjct: 7 KTLYVGNLDGTVSEELLVALFGKMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI--KKTVFVG 342
+A+I + + Q+ AL A N V I+++ A P + P DI +FVG
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRVFLDKEIKVNWATSPG------NTPKTDISSHHHIFVG 100
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKR 401
+L +++ E + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 101 DLSPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAM 156
Query: 402 RNLKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 157 NGQWIGSRSIRTNWSTRKLPPPR 179
>gi|295663372|ref|XP_002792239.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279414|gb|EEH34980.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 446
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 34/192 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP KK + K G + + I + + D GA KQ + + A
Sbjct: 96 VWVGNLPFTAKKSDIRKFLTGSGTLSNEDITRIHLPD------GA---KQNGKAQNKGFA 146
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDAPLY---------- 333
Y+ F + ++ E A+A + +I G + A P + GE A
Sbjct: 147 YVDFSTSKAMETAIAMSEQLINGRRALIKNAKSYAGRPERTKGGESAAGGREVNNSSMAA 206
Query: 334 ---DIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
++ + +FVGNL FDV E + F CG S+E+V V KG A+V
Sbjct: 207 AGKELSQRIFVGNLGFDVTKEILEDHFKPCG------SIESVHVATFEDSGKCKGYAWVE 260
Query: 389 FKTREAANLVIK 400
F++ + A ++
Sbjct: 261 FESIDGAEAAVR 272
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 30/206 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + L F + G + +I I E +
Sbjct: 8 KTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + QS ALA N + ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQSASTALAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNG 159
Query: 404 LKLRDRELRLSHAQQNCTPSKRKDVA 429
L R +R + + + P K + A
Sbjct: 160 QWLGSRSIRTNWSTRKPPPPKTEKAA 185
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 43/208 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC----PPRKKLKGEDA--PLYD------ 334
++ F + E A+ A N +G IR + + PP+ + + A P +D
Sbjct: 141 FVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTFDEVYNQS 200
Query: 335 --IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
TV+ G + ++ + + F ++ +RV + KG A++ F T+
Sbjct: 201 SPTNCTVYCGGFTTGLTEDLMQKTFSQFG----VIQDIRVFKD------KGYAFIKFATK 250
Query: 393 EAANLVIKR-RNLKLRDRELRLSHAQQN 419
E+A I+ N ++ + ++ ++N
Sbjct: 251 ESATHAIETIHNTEINGQMVKCFWGKEN 278
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 36/203 (17%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+T+FVG L V L KEF G + S R+ I +K +
Sbjct: 167 FKTVFVGGLSWNVDDDWLTKEFADAGAV-SARV---------------ITEKATGRSKG- 209
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD-----RACPPRKK-----LKGEDAPLY 333
Y+ F S + + F I G +RLD R P +K+ G+ L
Sbjct: 210 -FGYVDFASGADAQKCVEEFQDKEIDGRTVRLDISTNVRQTPEQKQRDRSSQYGDQ--LS 266
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
+ T+FVGNL FD ++++ +F SV ++R+ HP KG YV F + +
Sbjct: 267 EPADTLFVGNLSFDTNRDDLFGIFGEYG----SVVSIRLPTHPETEQPKGFGYVQFGSVD 322
Query: 394 AANLVIKR-RNLKLRDRELRLSH 415
A ++ + R RL +
Sbjct: 323 EAKAALEGLSGYEYLGRSFRLDY 345
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 37/232 (15%)
Query: 198 KRKKADNE-TEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA+ E T+ + E+ D +G +FVGNL V ++ L +EF +FG +VR
Sbjct: 240 KKRKAEAEATQTTKKSKTEQNGDAQGSP--NLFVGNLSWNVDEEWLGREFEEFGP-KAVR 296
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
I + D R Y+ F++ ++ AAL A + + L
Sbjct: 297 I----VTDRATGRSKGF-------------GYVEFETVEAATAALNAKKGTDLDNRPLNL 339
Query: 316 DRACP------PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
D + P PR + + D+ T+FVGNL FD + + ++F
Sbjct: 340 DFSTPRPEGQNPRDRASSRASQHGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYG---- 395
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSHA 416
++ V + P + KG YV F + E A + + +L R +RL A
Sbjct: 396 TITRVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEALQGAELNGRSMRLDFA 447
>gi|407929152|gb|EKG21988.1| MFS pantothenate transporter [Macrophomina phaseolina MS6]
Length = 345
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
EGK RT++VGNL + ++ L +EF +FG I + T I R A L +
Sbjct: 159 EGK--RTLYVGNLFYQTQEDQLRQEFSRFGNI----------VKTTIIRDPAGLSRGF-- 204
Query: 281 NADSVHAYIVFKSEQSTEAALA-FNMAVIGG------NHIRLDRACP-PRKKLKGEDAPL 332
Y+ F+++ S A+ N VI G +H R ++ PR++ +G P
Sbjct: 205 ------GYVEFENDDSAAVAIVQMNQRVIDGRRLTVQHHRRREQTEERPRRRNEGRVNP- 257
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGL-NDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
KT+F+GN+ F++ D ++ LF + N L+ V R P +G A+ F
Sbjct: 258 --PSKTLFIGNMSFEMSDRDLNDLFRNIRNVLDVRVAIDRRTGQP-----RGFAHADFID 310
Query: 392 REAANLVIKRRNLK-LRDRELRLSHAQQNCT 421
+A + + K L R LR+ + + N T
Sbjct: 311 ETSATKAKELLSQKELYGRRLRVDYTESNKT 341
>gi|324509900|gb|ADY44148.1| Cytoplasmic polyadenylation element-binding protein 1 [Ascaris
suum]
Length = 443
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 28/226 (12%)
Query: 195 VGEKRKKADNETEDMLVHRKEEG--FDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEI 252
+G + D + E VH G E R IF+G +P V + T+ F KFGE+
Sbjct: 122 MGMTNETGDRDAEGEKVHSSPFGCYMQPEEIYSRKIFIGGVPTDVTQDTVRATFSKFGEL 181
Query: 253 DSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNH 312
ID P G+ L++ + + +I++ E+S + ++ + G +
Sbjct: 182 ---------FIDWPKPSNGSTLKR--GGDCPLGYLFIIYMEERSVQKLMSSCYQMDGKAY 230
Query: 313 IRLDRACPPRKKLKGEDAPLYDIK------------KTVFVGNLPFDVKDEEIYQLFCGL 360
+ + +K ++ L DIK +TVF+G +P + EE+ + GL
Sbjct: 231 LLMSSQTVKQKPVEVRPWRLSDIKYEPYSDLQIDTLRTVFIGAMPRPTRAEELADVLSGL 290
Query: 361 NDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
V + P +R KG A V F T +K + + L
Sbjct: 291 F---GPVCYACIHVDPELRYPKGAARVTFATEAGFIAALKAKFVHL 333
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL + V++ L F + G + +I I E +
Sbjct: 8 KTLYVGNLDISVQEDLLCALFSQIGPVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + QS AL A N V ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQSASTALIAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ + + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 104 SPEIETDTLREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNG 159
Query: 404 LKLRDRELR 412
L R +R
Sbjct: 160 QWLGSRSIR 168
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+RT+++G+L + + L F GE+ SV++ I KQ +++
Sbjct: 66 VRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKV---------------IRNKQTSQSEG- 109
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRAC-PPRKKLKGEDAPLYDIKKTVF 340
+ +I F S E L +N A++ GG RL+ A ++ + +D+P Y T+F
Sbjct: 110 -YGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRQDDSPDY----TIF 164
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVI 399
VG+L DV D + + F +SV+ +V+ KG +V F + E +
Sbjct: 165 VGDLAADVTDYLLQETF---RARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAMT 221
Query: 400 KRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSN 453
+ + + R +R+ P+ K PA S PK L+S+ GS N ++
Sbjct: 222 EMQGVLCSTRPMRIG-------PASNK--TPATQSQPKASYLNSQPQGSQNEND 266
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 33/196 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + F ++GEI ID + P + N
Sbjct: 916 TLFVTNFPSTADESYIRNLFHEYGEI----------IDVRFP--------SLKYNTHRRF 957
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ FKS + A+ + + +G + + + P +K + P+Y+ ++ + V N+ +
Sbjct: 958 CYVQFKSAEDAHNAVQLDGSKVGSDLNLVVKISDPSRK-QDRHGPIYEGRE-IHVSNIDW 1015
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTREAANLVIKRRN 403
++++ LF VE VR+ R +V KG Y++F T+E AN +
Sbjct: 1016 KASEDDLKDLFSKYG----RVETVRIPR----KVDGGSKGFGYIVFSTKEEANAALAMHE 1067
Query: 404 LKLRDREL--RLSHAQ 417
+ R R L RLS Q
Sbjct: 1068 QEFRSRPLQVRLSTPQ 1083
>gi|169626491|ref|XP_001806645.1| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
gi|160706106|gb|EAT76075.2| hypothetical protein SNOG_16535 [Phaeosphaeria nodorum SN15]
Length = 321
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 24/148 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V + L K F +FGE+ SV+I + D + +G
Sbjct: 130 TLYIGNLYYEVTTEQLQKVFSRFGEVASVKI----VYDNRGMSRG--------------F 171
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNH--IRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
Y+ FKS + A+ +M V G + ++ RA + K E P KT+F+GN
Sbjct: 172 GYVEFKSIDDAQTAIDNLDMQVFEGRNLVVQYHRAKSDSDRPKREFPPANLPSKTLFIGN 231
Query: 344 LPFDVKDEEIYQLFCGL---NDLESSVE 368
+ F++ D+++ LF + ND+ +++
Sbjct: 232 MSFEMSDKDLNDLFRDIRNVNDVRVAID 259
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 29/197 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSVH 286
IFVG L V + L EF GE+ +R+ +D + R KG
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEV----VRASVQMDRQTGRSKG--------------F 434
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI----KKTVFV 341
Y+ F + ++ E A+A N I G + ++ A P G D K +FV
Sbjct: 435 GYVSFSTPEAAEKAIAEMNGKEIDGRAVNVNAATPKTPNPAGRAKQFGDTVSAESKVLFV 494
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GN+ F+ ++ +++ F D+ S VR+ KG YV F + E A
Sbjct: 495 GNVSFNANEDMLWETFGEHGDIVS----VRLPTDRETGQMKGFGYVEFTSVENAKSAFNA 550
Query: 402 RNLK-LRDRELRLSHAQ 417
N K + R +RL +Q
Sbjct: 551 LNGKDIAGRNIRLDFSQ 567
>gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum]
Length = 152
Score = 52.0 bits (123), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + F++ G P+++ +P+ +Q Q +
Sbjct: 14 TIYVGGLDEKVNESILWELFLQAG----------PVVNVHMPKDRINMQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ NM + G IR+++A +K L DI +F+GNL
Sbjct: 57 GFVEFMTEEDADYAMRIMNMIKLYGKPIRVNKASANQKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+V ++ +Y F + ++ +++R P KG A++ F R
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGNSKGYAFINFAFR 152
>gi|47229364|emb|CAF99352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 50/219 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ--------- 277
T++VG L KV + L + F++ G P+++T +P+ Q Q
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQGEQLFHTDN 63
Query: 278 ------------INENADSVH------AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA 318
+ N +VH ++ F SE+ + A+ NM + G IR+++A
Sbjct: 64 TEDACVRFQKRLLYVNETNVHILFSGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKA 123
Query: 319 CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHM 378
K L D+ +F+GNL ++ ++ +Y F + ++ +++R P
Sbjct: 124 SAHNKNL--------DVGANIFIGNLDPEIDEKLLYDTFSAFGVI---LQTPKIMRDPDT 172
Query: 379 RVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELRLSHA 416
KG A++ F + +A++ I+ N + L +R + +S+A
Sbjct: 173 GNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 211
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 37/207 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + L F + G + S +I I E +
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKI--------------------IREASSDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + QS + ALA N + I+++ A P + K + + + I FVG+L
Sbjct: 48 YAFIEYANHQSAQTALAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R P +G A+V F K EA N +
Sbjct: 104 SPEIETETLREAFAPFGEISN----CRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNG 159
Query: 404 LKLRDRELRLSHAQQNCTPSKRKDVAP 430
L R +R + S RK AP
Sbjct: 160 QWLGSRSIRTNW-------STRKPPAP 179
>gi|134076092|emb|CAK39451.1| unnamed protein product [Aspergillus niger]
Length = 1132
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 29/194 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P ++ + F + GEI ID + P + N
Sbjct: 742 TVFVTNFPATADEQYIRDLFREHGEI----------IDIRFP--------SLKYNTHRRF 783
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ +A + A +G G H+ + P R++ + P+Y+ + + V NL
Sbjct: 784 CYVQFKTAGEAYSATQLDGATVGNGLHLVAKISDPTRRQDR--QGPMYE-GREIHVSNLD 840
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE--AANLVIKRRN 403
+ ++++ +LF +VE VR+ R KG YV+F ++E A+LV+ +
Sbjct: 841 WKASEQDVEELFLRFG----TVELVRIPRKVDGG-SKGFCYVVFSSKEEAEASLVMHEQQ 895
Query: 404 LKLRDRELRLSHAQ 417
+ R ++LS Q
Sbjct: 896 FRSRPLHVKLSTPQ 909
>gi|356546384|ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 956
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAV-RVIRHPHMRVGKGIAYVLFKTR 392
D++ TVF+ NLPF+ +EE+ Q F G ++E V + +V + P +G ++ FKT
Sbjct: 494 DLQGTVFICNLPFECDNEEVKQRFSGFGEVEYFVPVLHQVTKRP-----RGTGFLKFKTV 548
Query: 393 EAANLVI 399
EAAN I
Sbjct: 549 EAANTAI 555
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 215 EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAIL 274
E G ++ ++ RT+ G L + + K EI +V P+ + + G +L
Sbjct: 169 EGGCSEKQRVARTVIFGGL---INSDMAEEVHSKAKEIGTVCSIKYPLSGKDLEQHG-LL 224
Query: 275 QKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
Q +A +V Y KS +++ A L + IGG ++ ++L GE +
Sbjct: 225 QDGCTLDASAV-LYTSVKSARASVATL--HKKEIGGGNVWA-------RQLGGEGSKTQK 274
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
K + + NLPF KD EI +F V V + + P + KG A+V F ++
Sbjct: 275 WK--LIIRNLPFKAKDNEIRDMFSSA----GYVWDVFIPQKPDTGLSKGFAFVKFTCKQD 328
Query: 395 ANLVIKRRN 403
A I++ N
Sbjct: 329 AEKAIQKLN 337
>gi|378727233|gb|EHY53692.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 381
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL V + L+KE +FG + +I + DT+ KG
Sbjct: 185 TLYVGNLFFDVTETDLVKEMARFGTVTRCKI----VRDTRGLSKG--------------F 226
Query: 287 AYIVFKSEQSTEAALAF-NMAVIGGNHIRLDRACPPRKKLKGEDA---PLYDIKKTVFVG 342
Y+ F ++++ +AAL NM + G I + A + + P+ KT+F+G
Sbjct: 227 GYVDFSTQEAADAALEALNMQMFEGRRITVQYAARSSGMMDTPNTTRRPMNPPSKTLFIG 286
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
N+ F++ D ++ LF G+ + V VRV +G A+ F ++A +K
Sbjct: 287 NMSFEMTDRDLSNLFRGIRN----VIDVRVAIDRRTGQPRGFAHADFIDVKSAMEAMKVL 342
Query: 403 NLK-LRDRELRLSH-------AQQNCTPSKRKDVAP 430
+ K + R LR+ + A +N P+ DV P
Sbjct: 343 SEKEIYGRRLRVDYSFSSSNRAPRNEAPANSDDVPP 378
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 31/192 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL KV ++ + + F++ G I ++ IPR K NE+ S +
Sbjct: 21 TLYVGNLDTKVNEELVWELFLQCGAI----------VNVHIPR-----DKVTNEH--SGY 63
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK+E+ + A+ +M + G I++++A +D ++ VFVGNL
Sbjct: 64 GFVEFKTEEDADYAIKIMHMVKLFGKPIKVNKAS--------QDKRTQEVGANVFVGNLH 115
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
DV ++ + +F + S+ +++R P +V K +V + E+++ I+ N +
Sbjct: 116 EDVDEKMLRDVFSSFGIVLST----KIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQ 171
Query: 406 -LRDRELRLSHA 416
L + + +S+A
Sbjct: 172 YLCGKPIDVSYA 183
>gi|1302151|emb|CAA96066.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 403
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 241
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 295
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + + RK V
Sbjct: 296 ELKDKSCRKIAGRPLRMEYGEDRSKRQVRKKV 327
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L V + L +EF + G + S R+ ++++ ++ +
Sbjct: 182 TLFVGRLSWNVDDEWLKREFEEAGGVISARV---------------MIERSTGKSRG--Y 224
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DI----KKTV 339
Y+ F S+ + E AL I G + LD + P+ + A + D+ T+
Sbjct: 225 GYVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTGKPKTPASNDRAKKFGDVPSAPSDTL 284
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
F+GNL F+ + +++++F +V + R+ HP + KG YV F + E A +
Sbjct: 285 FIGNLSFNTERNKLFEIFGEYG----TVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNAL 340
Query: 400 KRRNLKLRD-RELRLSHA 416
N + D R RL +
Sbjct: 341 NSLNGEYLDGRPCRLDFS 358
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + AP+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKAPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|147898449|ref|NP_001089615.1| uncharacterized protein LOC734673 [Xenopus laevis]
gi|68534615|gb|AAH99272.1| MGC116464 protein [Xenopus laevis]
Length = 391
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+I++GNL +V ++ L + ++ G P++ +PR +
Sbjct: 12 SIYIGNLDSQVNEEILWECMLQAG----------PVLSVNMPRDKV-------SGFHQGY 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FK+E+ + AL NM + IR ++A +K ++D+ +FVGNL
Sbjct: 55 GFVEFKTEEDADYALKVMNMIKLYNKPIRCNKATTDKK--------IHDVGANLFVGNLA 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+V ++ ++ F +L + ++++ P KG A+V F + + A+ I+ N
Sbjct: 107 PEVDEKMLFDTFSQFGNL---ISTPKIMKDPESGGSKGFAFVSFDSFDGADHAIQSMN 161
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G P++ +P+ Q
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAG----------PVVSVNMPKDRVTSSHQ-------GF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F E+ + A+ NM + G I++++A K + D+ VFVGNL
Sbjct: 57 GFIEFMGEEDADYAIKIMNMIKLYGKPIKVNKASAHEKNM--------DVGANVFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ ++ F + ++ +++R KG A+V F + EA++ I+ N +
Sbjct: 109 PEVDEKLLFDTFSAFGVI---LQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQ 165
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +S+A + T +R A
Sbjct: 166 FLCNRAITVSYAFKKDTKGERHGTA 190
>gi|414587096|tpg|DAA37667.1| TPA: hypothetical protein ZEAMMB73_462363 [Zea mays]
Length = 159
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 41/179 (22%)
Query: 380 VGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKF 439
V + V++ +EAAN V ++R++K+RDR LRL+HA+ V++ PKK
Sbjct: 2 VARTFDIVVYAVQEAANSVARKRDMKIRDRVLRLTHAK-------------PVDAAPKKT 48
Query: 440 VLDSRTL--------GSGNRSNS--------KVAMSYQGLQASKSCTQKKVHSGSSGVVK 483
+ R+ GN+SN +SYQGL++SKS KKV +
Sbjct: 49 EVKKRSRVPNHKEVSTPGNKSNEGSDKAKCKASVLSYQGLRSSKSGVVKKVKVTQQPSNQ 108
Query: 484 MKKSRTQKGERPKVQPEKRPAVALRKARAKAPKDVWVSRQAGMKRKMESQTPEISQRKK 542
K+ +T + + KRPAVA RKA +Q KRK+++ TPE + R K
Sbjct: 109 GKQRKTDETG-ATARKAKRPAVAARKA-----------KQLAKKRKVDASTPENTHRSK 155
>gi|395535971|ref|XP_003769994.1| PREDICTED: splicing factor 3B subunit 4 [Sarcophilus harrisii]
Length = 462
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 236 KVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQ 295
KV + L + F++ G P+++T +P+ Q Q + ++ F SE+
Sbjct: 61 KVSEPLLWELFLQAG----------PVVNTHMPKDRVTGQHQ-------GYGFVEFLSEE 103
Query: 296 STEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIY 354
+ A+ NM + G IR+++A K L D+ +F+GNL ++ ++ +Y
Sbjct: 104 DADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNLDPEIDEKLLY 155
Query: 355 QLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELRL 413
F + ++ +++R P KG A++ F + +A++ I+ N + L +R + +
Sbjct: 156 DTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITV 212
Query: 414 SHAQQNCTPSKRKDVAP 430
S+A + + +R AP
Sbjct: 213 SYAFKKDSKGERHGSAP 229
>gi|449681524|ref|XP_002157695.2| PREDICTED: splicing factor 3B subunit 4-like [Hydra magnipapillata]
Length = 328
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ +I F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 13 YGFIEFMSEEDADYAIKILNMIKVYGKPIRVNKASAHNKNL--------DVGANIFIGNL 64
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
D+ ++ +Y F + + +++R P KG A++ F + EA++ I N
Sbjct: 65 DPDIDEKLLYDTFSAFGVI---LTTPKIMRDPETGNSKGFAFINFASFEASDAAIDAMNG 121
Query: 405 K-LRDRELRLSHA 416
+ L +R + +S++
Sbjct: 122 QYLSNRPISVSYS 134
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 32/227 (14%)
Query: 196 GEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSV 255
G ++KAD E + K+ D E + ++VG L V + L EF GE+
Sbjct: 185 GHGKRKADQEAQ---APAKKSRTDGEAEPTANVYVGGLSWNVDNEWLASEFQSCGEVVEA 241
Query: 256 RIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL 315
R+ + D Q Q ++ ++ FK+ + A+A I G IR
Sbjct: 242 RV----MFDH---------QNQKSKG----FGFVRFKTAEEAAKAVAMTGHEIDGRAIRC 284
Query: 316 DRAC-----PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLES-SVEA 369
D A P ++ + + T+++G L +D+ ++ +Y+ F D++ S+
Sbjct: 285 DFAAEKTDNPVERRAQKFNDQRSAPAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPT 344
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELRLSH 415
R P KG YV F + A ++ N K L R +R+ +
Sbjct: 345 DRETGAP-----KGFGYVEFADVDQATAALEAMNGKELSGRRIRVDY 386
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI R+ P + KG +
Sbjct: 97 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDP---QTLKSKG--------------YG 139
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDAPL-YD--------I 335
++ F + E+A+ A N +G IR + A PP K PL +D
Sbjct: 140 FVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPT 199
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
TV+ G L + DE + + F + ++ +RV + KG A+V F T+E+A
Sbjct: 200 NCTVYCGGLTSGLTDELVQKTFAPFGN----IQEIRVFKD------KGYAFVRFATKESA 249
Query: 396 -NLVIKRRNLKLRDRELRLSHAQQNCTP 422
+ ++ N + + ++ S +++ P
Sbjct: 250 THAIVAVHNSDINGQPVKCSWGKESGEP 277
>gi|295665468|ref|XP_002793285.1| nucleic acid-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278199|gb|EEH33765.1| nucleic acid-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 273
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 29/136 (21%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL +V L ++ KFG I +VRI + D + +G
Sbjct: 84 TIYIGNLFFEVTADDLKRDMSKFGNILAVRI----VYDNRGMSRG--------------F 125
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPL----YDIKKTVFV 341
AY+ F S + EAA+A NM + G + ++ + +G P + +T+F+
Sbjct: 126 AYVQFDSVDAAEAAIAEMNMTIYEGRRVVVNYSS------RGSANPTPTRSNEPTRTLFI 179
Query: 342 GNLPFDVKDEEIYQLF 357
GNL F++ D E+ +LF
Sbjct: 180 GNLSFEMTDRELNELF 195
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + AP+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKAPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|317139650|ref|XP_003189187.1| C6 transcription factor [Aspergillus oryzae RIB40]
Length = 1086
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 28/195 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL V L K+ K+G ++SV I D + KG
Sbjct: 907 TVFVGNLFYDVTADDLRKQMEKYGVVESVYI----TFDNRGMSKG--------------F 948
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S S A+ A +M V G + + A + + L I +T+++GNLP
Sbjct: 949 GYVQFDSIDSARRAIDAMHMRVYEGRRVIVAFA----QNNIDQHRNLRPISRTLYLGNLP 1004
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D +I +LF D+ + ++ VRV + +G A+ F E+A + + K
Sbjct: 1005 FEMTDRDINELF---RDIVNVID-VRVSVDRRTGMFRGFAHAEFINVESARAAFEILSRK 1060
Query: 406 L-RDRELRLSHAQQN 419
R+LRL ++Q N
Sbjct: 1061 APYGRKLRLDYSQTN 1075
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 28/158 (17%)
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR 379
P ++ ++G+D P ++VGNLPFD+ E + ++F D VE V VI
Sbjct: 142 PEQESVEGQDYPPLPEGTKLYVGNLPFDIDSEGLAKMF----DESGVVEMVEVIYDRSSG 197
Query: 380 VGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQQNCTPSKRKDVAPA------- 431
+G A+V T E A IK+ N ++ R LR++ + P + +PA
Sbjct: 198 RSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPE---VPRLQNGRSPARSPSNFG 254
Query: 432 --VNSPPKKFV------LDSRTL-----GSGNRSNSKV 456
V+SP K +V + S TL G GN +KV
Sbjct: 255 GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKV 292
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP + + L K F + G ++ V + I D R A
Sbjct: 161 LYVGNLPFDIDSEGLAKMFDESGVVEMVEV----IYDRSSGRSRGF-------------A 203
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAP---------LYDIKK 337
++ + + EAA+ FN I G +R++ PR L+ +P D
Sbjct: 204 FVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPR--LQNGRSPARSPSNFGGFVDSPH 261
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR-EAAN 396
V+VGNL + V E + + G + +V +VI+ +G +V F + E
Sbjct: 262 KVYVGNLAWSVTSETLREALNG----KGNVLGAKVIQDRETGRSRGFGFVSFSSEAEVEA 317
Query: 397 LVIKRRNLKLRDRELRLSHAQQNCT 421
V + L++ R +R++ A+ T
Sbjct: 318 AVSEMDGLEVEGRSIRVNVAKSRST 342
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 44/196 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTI+VGN+ +V + L+ F G + +RI P DT+
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTR------------------- 46
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY-------DIKKT 338
+A+I F + + ++ A+ + ++ IR++ A +G P +++T
Sbjct: 47 YAFIEFTTPEESQTAMMLDGMMVFERQIRVNMA-------RGGSGPGVVRSNDPDRVQRT 99
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+ +G LPFD EE ++D S++ V +R + G+ A+V F T +AA
Sbjct: 100 IHIGGLPFDELSEE------SISDYFSNIGEVNAVR----KSGR-FAWVEFNTLQAAQTA 148
Query: 399 IKRRNLKLRDRELRLS 414
+ L +++S
Sbjct: 149 MSLDGESLGSGTMKVS 164
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 33/217 (15%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA E E K EG + +FVG+L V + L EF +FGEI +VR+
Sbjct: 276 KKRKAATEAEPTPKKVKTVSSAQEG--AKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRV 333
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
+ D + R KG Y+ + + ++ + AL I G I +
Sbjct: 334 ----VTDRESGRSKG--------------FGYVEYTTNEAAKKALEEMKGKDIDGRTINV 375
Query: 316 DRACPPRKKLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQL-FCGLNDLESSVEA 369
D + P + + + + LY +K TVFV NL F+ DE+I Q F G + +
Sbjct: 376 DFSAPRPENPRQDRSRLYGDQKSPESETVFVANLSFEA-DEQIVQTEFEGFGN----IVG 430
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+R+ P KG Y+ + ++A ++ N L
Sbjct: 431 LRIPTDPESGQPKGFCYIQYDRVDSARKAVEEMNGAL 467
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 92/192 (47%), Gaps = 31/192 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI++GNL KV + + FI+ G P+++ IP+ + Q +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCG----------PVVNVHIPKDKISGEHQ-------GY 62
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ FKSE+ + A+ +M + G I++++A +D ++ +F+GNL
Sbjct: 63 GFVEFKSEEDADYAIKIMHMIKLYGKPIKVNKAS--------QDKRTQEVGANLFIGNLD 114
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y+ F + S+ +++R+P V KG +V + E+++ + N +
Sbjct: 115 TEIDEKTLYETFSAFGHILST----KIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQ 170
Query: 406 -LRDRELRLSHA 416
L + +R+ +A
Sbjct: 171 FLGTKIIRVEYA 182
>gi|344270943|ref|XP_003407301.1| PREDICTED: RNA-binding protein 28 isoform 2 [Loxodonta africana]
Length = 614
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+V F T+EAA
Sbjct: 190 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFVQFLTQEAAQ 245
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 246 KCLAAASPETEGGGLKLDGRQLKVDLA 272
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 28/158 (17%)
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR 379
P ++ ++G+D P ++VGNLPFD+ E + ++F D VE V VI
Sbjct: 150 PEQESVEGQDYPPLPEGTKLYVGNLPFDIDSEGLAKMF----DESGVVEMVEVIYDRSSG 205
Query: 380 VGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQQNCTPSKRKDVAPA------- 431
+G A+V T E A IK+ N ++ R LR++ + P + +PA
Sbjct: 206 RSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPE---VPRLQNGRSPARSPSNFG 262
Query: 432 --VNSPPKKFV------LDSRTL-----GSGNRSNSKV 456
V+SP K +V + S TL G GN +KV
Sbjct: 263 GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVLGAKV 300
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP + + L K F + G ++ V + I D R A
Sbjct: 169 LYVGNLPFDIDSEGLAKMFDESGVVEMVEV----IYDRSSGRSRGF-------------A 211
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAP---------LYDIKK 337
++ + + EAA+ FN I G +R++ PR L+ +P D
Sbjct: 212 FVTMSTVEEAEAAIKKFNGFEIDGRSLRVNFPEVPR--LQNGRSPARSPSNFGGFVDSPH 269
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR-EAAN 396
V+VGNL + V E + + G + +V +VI+ +G +V F + E
Sbjct: 270 KVYVGNLAWSVTSETLREALNG----KGNVLGAKVIQDRETGRSRGFGFVSFSSEAEVEA 325
Query: 397 LVIKRRNLKLRDRELRLSHAQQNCT 421
V + L++ R +R++ A+ T
Sbjct: 326 AVSEMDGLEVEGRSIRVNVAKSRST 350
>gi|365763529|gb|EHN05057.1| Nop13p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 403
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT-----V 339
Y+ FK+ + +A L + + + G ++ + + + +D L + K +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD--LVAMSKNPPSRIL 241
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 242 FVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGSTN 295
Query: 398 VIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + RK V
Sbjct: 296 ALKDKSCRKIAGRPLRMEXGEDRSKRQVRKKV 327
>gi|326470511|gb|EGD94520.1| pre-mRNA splicing factor (Prp24) [Trichophyton tonsurans CBS 112818]
Length = 1279
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 31/192 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV N P + + + F +GEI VR S+ N
Sbjct: 872 TIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKF------------------NTHRRF 913
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F S S AA + IG + + P ++ A Y+ + ++V N+P+
Sbjct: 914 CYVQFTSSSSAYAATELDKKDIGDGLELVVKISDPSQRQARSGA--YEEGREIYVCNIPY 971
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTRE--AANLVIKRR 402
+ ++ +LF D+ES +R P G +G +V F T++ A L + +
Sbjct: 972 KTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFGFVTFATKDQSTAALAMNEK 1024
Query: 403 NLKLRDRELRLS 414
K R+ +RLS
Sbjct: 1025 TFKGRELNVRLS 1036
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
+++KA++E E++ +K + +EG L F+GNL V ++ L EF +FGE+ VRI
Sbjct: 234 QKRKAEDEEEEVSAPKKTKVDSNEGGNL---FIGNLSWNVDEEWLRSEFEEFGELAGVRI 290
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR 317
+ D R + AD+ A+ K + L + A N +R
Sbjct: 291 ----VTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPKER 346
Query: 318 ACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPH 377
A + + +P D T+F+GN+ F + I + F S+ VR+ P
Sbjct: 347 AQSRAQNFGDQTSPESD---TLFIGNIAFSANENMISEAFA----EHGSILGVRLPTDPE 399
Query: 378 MRVGKGIAYVLFKTREAANLVIKRRN---LKLRDRELRLSHAQQNC 420
KG YV F + + A + N L R L S +QN
Sbjct: 400 SGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQNS 445
>gi|440640811|gb|ELR10730.1| hypothetical protein GMDG_04988 [Geomyces destructans 20631-21]
Length = 518
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV--PIIDTKIPR---KGAILQKQINENA 282
I+VGNLP V K+ L I G + I + P D K P + + Q N+
Sbjct: 208 IWVGNLPWSVSKEDLKSFLINQGPMPEEAITRIHMPSPDDKKPANKVESRFTRTQHNKG- 266
Query: 283 DSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL--DRACPPRKKLKGEDAPLYDIK---K 337
AY+ F + + T AA+A + ++GG + + +++ R + + A + K K
Sbjct: 267 ---FAYVDFTTAEHTLAAVALSEELLGGRRVLIKNNKSFEGRPLVAKDAAAKKETKAPSK 323
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VF+GNL FD +E + + F CG +E V KG A++ F EA+
Sbjct: 324 RVFLGNLRFDTTEESLKEHFERCG------PIETCMVATFEDSGKCKGYAWITFADLEAS 377
Query: 396 NLVIK 400
++
Sbjct: 378 ARAVR 382
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 26/201 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP V L F + G ++ V + I D R
Sbjct: 85 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----IYDKLTGRSRGF-------------G 127
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ S Q EAA+ FN V+ G +R++ PP + + P D + V+VGNL +
Sbjct: 128 FVTMSSVQEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDPSSQRGPRGDANR-VYVGNLSW 186
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLK 405
V + + LF + V R++ +G +V + + E N +
Sbjct: 187 GVDNSALANLFS----EQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSD 242
Query: 406 LRDRELRLSHAQQNCTPSKRK 426
L R++R++ A+ P +R+
Sbjct: 243 LDGRQIRVTVAE--SKPPRRQ 261
>gi|403172110|ref|XP_003331254.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169716|gb|EFP86835.2| hypothetical protein PGTG_13217 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 392
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 37/208 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL + L+ E + +++ P+++ +P+ + Q +
Sbjct: 14 TVYMGNLDERCTD-ALVWELM---------LQAGPVVNVHLPKDRVSMSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F +E E A N + G IR+++A RK++ DI +F+GNL
Sbjct: 57 GFCEFLTEDDAEYACKIMNQIKLYGKPIRVNKASSDRKQV--------DIGANLFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V + +Y F L V+ ++ R+P G +V +++ EAA+ I+ N +
Sbjct: 109 ANVDERMLYDTFSTFGTL---VQTAKIARNPTTGQSNGYGFVAYESFEAADTAIESMNGQ 165
Query: 406 -LRDRELRLSHA-------QQNCTPSKR 425
L ++ + + +A +++ TP++R
Sbjct: 166 FLMNKAITVQYAFKKDGKGERHGTPAER 193
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 47/224 (20%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR-KGAILQKQINENADSV 285
T+FVG L V ++ L++EF +FGE+ S RI + D + + KG
Sbjct: 2 TLFVGGLSWNVDEEWLMREFEEFGELASTRI----MTDRETGKSKG-------------- 43
Query: 286 HAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRAC--------PPRKKLKGEDAPLYDIK 336
++ FKS + + +A I G ++RLD P+++ D+
Sbjct: 44 FGFVEFKSVDGAIKAVEGKQGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRAGKFGDVP 103
Query: 337 K----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV-LFKT 391
K T+FVGN+ FD ++ + ++F S++AVR+ KG YV +F
Sbjct: 104 KEPSSTLFVGNVSFDANEDMVTEVFSEYG----SIKAVRLPTDRDTGALKGFGYVEMFSI 159
Query: 392 REAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSP 435
+A + ++ R +RL ++ TP PA +SP
Sbjct: 160 DDAKVAFEALQGAEIAGRSIRLDYS----TPK------PANDSP 193
>gi|299742932|ref|XP_001835432.2| RNA-binding protein [Coprinopsis cinerea okayama7#130]
gi|298405419|gb|EAU86400.2| RNA-binding protein [Coprinopsis cinerea okayama7#130]
Length = 697
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 119/322 (36%), Gaps = 135/322 (41%)
Query: 226 RTIFVGNLPLKVKKKTLIKE--------FIKFGEIDSVRIRSVPI--IDTKIPRKG---- 271
RTIFVGNLPL V +K +++ + +I+S+R RSVP K+P G
Sbjct: 240 RTIFVGNLPLAVAEKRPLQKQLQKHILALVPTAKIESLRFRSVPFQAPTAKLPDDGTDKP 299
Query: 272 ------------------------AILQKQINENA------------------------- 282
+ LQ + +E+A
Sbjct: 300 TDKPKPKPRQHELDRASTWRSSKDSSLQDKKDEDALKKDEKRYLTPSQKKKIAFINQEFH 359
Query: 283 ---DSVHAYIVFKS--EQST---------------EAALA----FNMAVIGGNHIRLDRA 318
D+V+AYIVF +QST EAA N V IR+DR
Sbjct: 360 ANADTVNAYIVFAHPVDQSTRPKNLPPLPVTMCPYEAAKVAVERCNNTVFMERIIRVDRV 419
Query: 319 CPPRKKLKGE-------------DAPLYDI--KKTVFVGNLPFDVKDEEIYQLFCGL--- 360
K+KG P+ D K ++FVGNL F+ K+E++ F L
Sbjct: 420 G----KVKGSGRKGAEEDEDGEEARPMVDADPKLSIFVGNLDFESKEEDLRVFFETLLVA 475
Query: 361 ------NDLESSVEA--------------VRVIRHPHMRVGKGIAYVLFKTREAAN--LV 398
+ E ++E VR++R ++GKG AYV F ++ + L
Sbjct: 476 EKGAPGGEGEETIEVDGVVIKKPKTWVTHVRIVRDRDTQLGKGFAYVQFADKDCVDEILA 535
Query: 399 IKRRNLKLRDRELRLSHAQQNC 420
+ +K R+LR+ Q C
Sbjct: 536 MDPTKVKFAKRKLRV----QRC 553
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + L +EF G + S R+ I+++ ++ +
Sbjct: 4 TLFVGRLSWNIDDDWLKREFEPSGGVISARV---------------IMERATGKSRG--Y 46
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DI----KKTV 339
Y+ F+S+ E AL F I G I LD + P+ K + A + D+ T+
Sbjct: 47 GYVDFESKADAEKALQDFQGKEIDGRPINLDLSTSKPQTPAKNDRAKKFGDVVSAPSDTL 106
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
F+GNL F+ +++++ F + V + R+ HP + KG YV + + E A +
Sbjct: 107 FIGNLSFNATRDKLFEAFGQYGE----VISCRIPTHPDTQQPKGFGYVQYGSIEEAKAAL 162
Query: 400 KRRNLK-LRDRELRLSHA 416
+ N + + R RL ++
Sbjct: 163 EALNGEYIEGRPCRLDYS 180
>gi|350635663|gb|EHA24024.1| hypothetical protein ASPNIDRAFT_128739 [Aspergillus niger ATCC 1015]
Length = 1595
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 35/197 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P ++ + F + GEI ID + P + N
Sbjct: 912 TVFVTNFPATADEQYIRDLFREHGEI----------IDIRFP--------SLKYNTHRRF 953
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FK+ +A + A +G G H+ + P R++ + P+Y+ + + V NL
Sbjct: 954 CYVQFKTAGEAYSATQLDGATVGNGLHLVAKISDPTRRQDR--QGPMYE-GREIHVSNLD 1010
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRV---GKGIAYVLFKTRE--AANLVIK 400
+ ++++ +LF +VE VR+ R +V KG YV+F ++E A+LV+
Sbjct: 1011 WKASEQDVEELFLRFG----TVELVRIPR----KVDGGSKGFCYVVFSSKEEAEASLVMH 1062
Query: 401 RRNLKLRDRELRLSHAQ 417
+ + R ++LS Q
Sbjct: 1063 EQQFRSRPLHVKLSTPQ 1079
>gi|126644829|ref|XP_001388131.1| cutinase negative acting protein [Cryptosporidium parvum Iowa II]
gi|126117359|gb|EAZ51459.1| cutinase negative acting protein, putative [Cryptosporidium parvum
Iowa II]
Length = 711
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 40/196 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++ GNLP ++ + F + G I+ V + S D
Sbjct: 507 REVYCGNLPYSCTEEEIRGLFEECGSIERVSVLS-----------------------DKG 543
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACP---PRKKLKGEDAPLYDIKKTVFVG 342
A+I F+ E+ ++A+ +N G +R++ + P G P +V V
Sbjct: 544 CAFITFEQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGP------SVIVR 597
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
N+PF DE + F CG+ V+ V + R+ +G A V F+ E +K
Sbjct: 598 NIPFSSDDESVKSFFNGCGV------VKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALK 651
Query: 401 RRNLKLRDRELRLSHA 416
+ RE+ + A
Sbjct: 652 LSGTSMNGREVTIEIA 667
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 33/229 (14%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
KRK D+ET +K + D + +FVGNL V + L EF +FGE+ VR+
Sbjct: 232 KRKAEDDETP---AAKKSKVADVDTSKGPNLFVGNLSWNVDENWLRSEFEEFGELSGVRL 288
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRLD 316
+ D + R Y+ F + + +A A A + G + +D
Sbjct: 289 ----MTDRQTGRSKGF-------------GYVEFVDAADAAKAYAAKQGAELDGRPLNVD 331
Query: 317 RAC-------PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
A P + K L + T+F+GNL FD E++ + F +V
Sbjct: 332 FANARSNDNKPADNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEAFA----PHGTVMG 387
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAANLVIKR-RNLKLRDRELRLSHAQ 417
+R+ KG YV F + + A ++ + +++R +RL ++Q
Sbjct: 388 IRLPTDRETGAPKGFGYVTFGSVDEAKAALEAMQGGYIKNRPIRLDYSQ 436
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI R+ P + KG +
Sbjct: 64 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDP---QTLKSKG--------------YG 106
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDAPL-YD--------I 335
++ F + E+A+ A N +G IR + A PP K PL +D
Sbjct: 107 FVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPT 166
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
TV+ G L + DE + + F + ++ +RV + KG A+V F T+E+A
Sbjct: 167 NCTVYCGGLTSGLTDELVQKTFAPFGN----IQEIRVFKD------KGYAFVRFATKESA 216
Query: 396 -NLVIKRRNLKLRDRELRLSHAQQNCTP 422
+ ++ N + + ++ S +++ P
Sbjct: 217 THAIVAVHNSDINGQPVKCSWGKESGEP 244
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 36/190 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F GNL + TL + F F + R+ + D R
Sbjct: 268 TLFAGNLSWNIDDNTLSEAFKGFEGLVGARV----VTDRDGGRSRGF------------- 310
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRA------------CPPRKKLKGEDAPLY 333
Y+ F++ E +T+A A + + + LD A R K G+ +
Sbjct: 311 GYVDFETAEAATKAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKKHGDS--VS 368
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
+T+F+GNLPFD E + Q F + + V +VR+ P KG YV F + E
Sbjct: 369 PESETLFIGNLPFDTDQETVRQFFAEV----AEVASVRLPTDPDSGNLKGFGYVTFTSVE 424
Query: 394 AANLVIKRRN 403
A V ++ N
Sbjct: 425 DAKNVFQQLN 434
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP V L F + G ++ V + I D R
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----IYDKLTGRSRGF-------------G 130
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ S + EAA+ FN ++ G +R++ PP ++ + AP + + V+VGNL +
Sbjct: 131 FVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSQRAPRGEANR-VYVGNLSW 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLK 405
V + + LF G E V +VI +G +V + + E N V
Sbjct: 190 GVDNAALANLFSG----EGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGAD 245
Query: 406 LRDRELRLSHAQQNCTPSKRK 426
+ R++R++ A+ P +R+
Sbjct: 246 MDGRQIRVTVAESK--PPRRQ 264
>gi|401402625|ref|XP_003881295.1| putative nucleolar phosphoprotein nucleolin [Neospora caninum
Liverpool]
gi|325115707|emb|CBZ51262.1| putative nucleolar phosphoprotein nucleolin [Neospora caninum
Liverpool]
Length = 710
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 321 PRKKLKGEDAPLYD-IKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHP 376
P+ +L+ + + D ++ +F G LP+ + E+ +LF CG R+
Sbjct: 431 PKARLQTKGGGVVDKLRTEIFCGGLPYSTTESELKELFESDCGPT--------TRI---- 478
Query: 377 HMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELR--LSHAQQNCTP 422
M GKGIA++ F+T EAA ++ N + R LR L+ +QN P
Sbjct: 479 KMLEGKGIAFITFETEEAAQKAVEYNNTQYNGRTLRINLTADKQNHQP 526
>gi|323346845|gb|EGA81124.1| Nop13p [Saccharomyces cerevisiae Lalvin QA23]
Length = 352
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGS 293
Query: 396 NLVIKRRNL-KLRDRELRLSHAQQNCTPSKRKDV 428
+K ++ K+ R LR+ + RK V
Sbjct: 294 TNALKDKSCRKIAGRPLRMEXGEDRSKRQVRKKV 327
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ VP
Sbjct: 61 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVP----------------- 99
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 100 NTGRSKGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 148
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ FK E
Sbjct: 149 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFKEEEPVKK 204
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 205 VLEKKFHTISGSKCEIKVAQ 224
>gi|126273923|ref|XP_001387749.1| nuclear localization sequence binding protein [Scheffersomyces
stipitis CBS 6054]
gi|126213619|gb|EAZ63726.1| nuclear localization sequence binding protein, partial
[Scheffersomyces stipitis CBS 6054]
Length = 245
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + S R+ I+++ ++ +
Sbjct: 4 TLFVGRLSWNIDDEWLRREFEPLGGVISARV---------------IMERATGKSRG--Y 46
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLD---------RACPPRKKLKGE--DAPLYD 334
Y+ F S+ + E AL + + G I LD ++ R K G+ AP
Sbjct: 47 GYVDFDSKSAAEKALNEYQGRELDGRPINLDMSTGKPHVTKSTENRAKQYGDTPSAP--- 103
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
T+F+GNL F+ + ++ +F + +V + R+ HP + KG YV F + +
Sbjct: 104 -SDTLFIGNLSFNADRDNLFNIF----GVHGTVISCRIPTHPDTQQPKGFGYVQFSSVDE 158
Query: 395 ANLVIKRRNLK-LRDRELRLSHA 416
A ++ N + + R RL +
Sbjct: 159 AKAAMEALNGEYIEGRACRLDFS 181
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F FG+I+S+ +++ P T +G
Sbjct: 56 RKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDP---TTGRSRG-------------- 98
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +S + A+A G+HI ++ P KK K +FVG L
Sbjct: 99 FAFIVFAKAESLDKAMAH------GDHIINNKKVDP-KKAKARHGK-------IFVGGLS 144
Query: 346 FDVKDEEI---YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
++ D++I + F + D+E + + R KG ++ F++ + AN ++K
Sbjct: 145 TELSDDDIKTFFSQFGTIVDVEMPFDKTKNQR-------KGFCFITFESEQVANELLKTS 197
Query: 403 NLKLRDRELRLSHA 416
+ +E+ + A
Sbjct: 198 KQTISGKEVEVKKA 211
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 34/228 (14%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E + K E EG ++ +FVG+L + + L +EF FGEI R+
Sbjct: 172 KKRKAEAAAEPAVKKTKTEAPASEG--IKNLFVGSLSWNIDEDWLRREFEGFGEITGCRV 229
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLD 316
I D + R Y+ F S A A + + G + +D
Sbjct: 230 ----ITDRESGRSKGF-------------GYVEFASAADAAKAKAEMHEYELDGRGLNVD 272
Query: 317 RACPPRKKLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVR 371
+ P K + A Y K+ T+F+GNL FD +E I ++F ++ R
Sbjct: 273 FSTPREKPDQSARANKYGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNI------TR 326
Query: 372 VIRHPHMRVG--KGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHA 416
V G KG YV F T E A ++ N ++ R +R+ +A
Sbjct: 327 VSLPTDRDTGSLKGFGYVDFGTVEEATAALEALNGQEVEGRAIRIDYA 374
>gi|385305287|gb|EIF49275.1| nuclear localization sequence binding protein [Dekkera bruxellensis
AWRI1499]
Length = 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 39/206 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS-- 284
T+FVG L V L K+F +D +P G + I EN
Sbjct: 109 TMFVGRLSWNVDDDGL-KQFF---------------VDENVP--GVXSARVITENGSGRS 150
Query: 285 -VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP-PR----------KKLKGEDAP 331
Y+ F S EAA+ ++ A I G + LD A PR + K D P
Sbjct: 151 KGFGYVDFDSVAHAEAAVKKYDGAEIDGRAVHLDMAASKPRSSSPNDRANNRAKKYGDTP 210
Query: 332 LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT 391
+ T+FVGNL F+ +++ F S+E +R+ P +G AYV F +
Sbjct: 211 S-EPSDTLFVGNLSFEATMDDVRGAFESF----GSIEXIRIPTRPGTEDPRGFAYVQFSS 265
Query: 392 REAANLVIKRRNLK-LRDRELRLSHA 416
E A + N + + R +RL ++
Sbjct: 266 VEEAKAALDGMNGEYINGRSVRLDYS 291
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 19/98 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL + + F FG I+ +RI + P T+ PR
Sbjct: 216 TLFVGNLSFEATMDDVRGAFESFGSIEXIRIPTRP--GTEDPRG---------------F 258
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-PR 322
AY+ F S + +AAL N I G +RLD + P PR
Sbjct: 259 AYVQFSSVEEAKAALDGMNGEYINGRSVRLDYSTPRPR 296
>gi|154292195|ref|XP_001546674.1| hypothetical protein BC1G_14719 [Botryotinia fuckeliana B05.10]
Length = 478
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH- 286
++VGNLP V K+ L K F++F +++ I I P G K + VH
Sbjct: 177 VWVGNLPWSVSKEELRKWFVEFSDLEEEHITR---IHMPGPNDGKPANKVEKKFGKPVHN 233
Query: 287 ---AYIVFKSEQSTEAALAFNMAVIGGNHIRLD-----RACPPRKKLKGEDAPLYDIKKT 338
AY+ F +E+ + A+ + ++ G + + P +K+ E P K
Sbjct: 234 KGFAYVDFATEEQVKLAVELSEQLLTGRRLLIKDNKSFEGRPEKKEAVIEGKPP---SKK 290
Query: 339 VFVGNLPFDVKDEEIYQLF--CG 359
+FVGNL FD +E I + F CG
Sbjct: 291 IFVGNLRFDATEEVIKEHFEKCG 313
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG----------------K 382
V+VGNLP+ V EE+ + F +DLE E + I P G K
Sbjct: 177 VWVGNLPWSVSKEELRKWFVEFSDLEE--EHITRIHMPGPNDGKPANKVEKKFGKPVHNK 234
Query: 383 GIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
G AYV F T E L ++ L R L +
Sbjct: 235 GFAYVDFATEEQVKLAVELSEQLLTGRRLLI 265
>gi|344270941|ref|XP_003407300.1| PREDICTED: RNA-binding protein 28 isoform 1 [Loxodonta africana]
Length = 755
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+V F T+EAA
Sbjct: 331 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFVQFLTQEAAQ 386
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 387 KCLAAASPETEGGGLKLDGRQLKVDLA 413
>gi|324503789|gb|ADY41640.1| Squamous cell carcinoma antigen recognized by T-cell 3 [Ascaris
suum]
Length = 851
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+F+ NL K+ K+ +++ F E VR I R + L K
Sbjct: 621 KTVFISNLDFKLPKEKIMQIFPNAKE---VRF---------IQRGMSKLHKGF------- 661
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGE-DAPLYDIKKTVFVGNL 344
Y+ F++ + + AL+ + +I G + + P K + E P K +FV N+
Sbjct: 662 -GYVDFETVEEAQEALSKDRHLIDGRPMYVSENKPHEKGQRNEFRYPTTLEKNKLFVNNV 720
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+D E++ ++F ++ VR++ H + KG AYV F+ AA+ +K ++
Sbjct: 721 HYDATSEQVKEVFAVFG----AIRDVRIVTHKSGK-SKGCAYVEFEEESAASAALKAEDI 775
Query: 405 KLRDRELRLSHAQQNCTPSKRKDVA 429
L +R+L ++++ P K+KD++
Sbjct: 776 VLLERKLSVAYS----NPPKKKDLS 796
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G P++ +P+ Q
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAG----------PVVSVNMPKDRVTSSHQ-------GF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+I F E+ + A+ NM + G I++++A K + D+ VFVGNL
Sbjct: 57 GFIEFMGEEDADYAIKIMNMIKLYGKPIKVNKASAHEKNM--------DVGANVFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ ++ F + ++ +++R KG A+V F + EA++ I+ N +
Sbjct: 109 PEVDEKLLFDTFSAFGVI---LQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQ 165
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +S+A + T +R A
Sbjct: 166 FLCNRAITVSYAFKKDTKGERHGTA 190
>gi|258564845|ref|XP_002583167.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906868|gb|EEP81269.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1297
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 31/190 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P + + + + F +GEI VR S+ N
Sbjct: 898 TLFVTNFPPEADEAYIRRIFGPYGEIAEVRFPSLKF------------------NTHRRF 939
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGN-HIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S AAL + +G N H+ + + P +++ + + ++ + + + NL
Sbjct: 940 CYVQFASTVDAHAALELDQEPVGENLHLVVKISDPSKRQAR---SGAFEEGREIHISNLD 996
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRN 403
+ ++++ +LF +E V R P G KG +V F T E AN +
Sbjct: 997 WKATEDDLVELFMAFGKVE-------VARIPTKADGGSKGFGFVAFSTPETANAALAMDQ 1049
Query: 404 LKLRDRELRL 413
+ R R LR+
Sbjct: 1050 KEFRSRPLRV 1059
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 49/214 (22%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +F+G LP K +K + K F G I+++ + P+ NADS
Sbjct: 25 RRVFLGGLPFKATEKDIKKMFESCGAIENIEL---PM------------------NADSR 63
Query: 286 HA---YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA------------CPPRKKLKGEDA 330
A ++ FK S A+A + + G +++ A P R E
Sbjct: 64 PAGFGFLTFKDADSVAKAVAMDGQELMGRWVKVKEADGTEGSAGKKPFTPNR-----EPK 118
Query: 331 PLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
P D T+F+GNL +DV ++ I F CG V VR KG +V
Sbjct: 119 PKPDGCTTIFMGNLSWDVDEDTIRSFFADCG------EVVNVRFATDRETGDFKGFGHVQ 172
Query: 389 FKTREAANLVIKRRNLKLRDRELRLSHAQQNCTP 422
F A +L + + + R +R+ A+ P
Sbjct: 173 FAESSATDLAVAKGGEFVAGRAIRVDFAEDRKPP 206
>gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster]
Length = 366
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENA--DS 284
TI+ G L KV + L + F++ G + + +P I+ +N + D
Sbjct: 14 TIYAGGLDDKVSETLLWELFVQAGPVGKSGHTCI------VPSSSLIVMLAVNVHMPKDR 67
Query: 285 V------HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK 337
V + ++ F SE+ + + NM + G IR+++A +K L D+
Sbjct: 68 VTQMHQGYGFVEFLSEEDADYGIKIMNMIKLYGKPIRVNKASAHQKNL--------DVGA 119
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+F+GNL +V ++ +Y F + ++ +++R P K A++ F + EA++
Sbjct: 120 NIFIGNLDVEVDEKLLYDTFSAFGVI---LQTPKIMRDPETGKSKSFAFINFASFEASDA 176
Query: 398 VIKRRNLK-LRDRELRLSHA 416
+ N + L +R + +S+A
Sbjct: 177 AMDAMNGQYLCNRPISVSYA 196
>gi|422292932|gb|EKU20233.1| splicing factor 3B subunit 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++ G L KV + L + G P++ +PR Q
Sbjct: 14 TVYCGGLDEKVTEDLLWELMQNVG----------PVVHVHMPRDKVTGMHQ-------CF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G +R+++A RK + D+ +F+GNL
Sbjct: 57 GFVEFRSEEDADYAVKIMNMVRMYGKPLRVNKASQDRKTV--------DVGANLFIGNLA 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-L 404
+V ++++Y F + + +V+ P KG +V F + EAA+ I+ N
Sbjct: 109 AEVDEKDLYDTFSAFGGI---TQPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGA 165
Query: 405 KLRDRELRLSHA 416
L R + + +A
Sbjct: 166 YLGGRPICVQYA 177
>gi|323510053|dbj|BAJ77920.1| cgd3_4150 [Cryptosporidium parvum]
Length = 747
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 40/196 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++ GNLP ++ + F + G I+ V + S D
Sbjct: 543 REVYCGNLPYSCTEEEIRGLFEECGSIERVSVLS-----------------------DKG 579
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC---PPRKKLKGEDAPLYDIKKTVFVG 342
A+I F+ E+ ++A+ +N G +R++ + P G P +V V
Sbjct: 580 CAFITFEQEEGAKSAIQWNQTEYKGRMLRINMSADKPQPGSLSSGGYGP------SVIVR 633
Query: 343 NLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
N+PF DE + F CG+ V+ V + R+ +G A V F+ E +K
Sbjct: 634 NIPFSSDDESVKSFFNGCGV------VKRVSIPRYSDTGKMRGFAMVEFENDEQIQNALK 687
Query: 401 RRNLKLRDRELRLSHA 416
+ RE+ + A
Sbjct: 688 LSGTSMNGREVTIEIA 703
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
++ DEEI F ++ VE + + + R KG ++ F + + N ++K
Sbjct: 125 TEISDEEIKTFFGQFGNI---VEVEMPFDKQKNQR--KGFCFITFDSEQVVNELLKTPKQ 179
Query: 405 KLRDRELRLSHA 416
+ +E+ + A
Sbjct: 180 TISGKEVDVKKA 191
>gi|351714226|gb|EHB17145.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 297
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L KV + L + F++ + P+++T +P+ Q Q +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQ----------ARPVVNTHMPKDRVTGQHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F SE+ + + NM + G IR+++A K L DI +F+GNL
Sbjct: 57 GFVEFLSEEDADYDIKIMNMIKLYGKPIRVNKASAHNKNL--------DIGANIFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ ++ +Y F + ++ +++R P K A++ F + +A++ I+ N +
Sbjct: 109 PEIDEKLLYDTFSTFGVI---LQTPKIMRDPDTGNSKSYAFINFASFDASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 YLCNRPITVSYA 177
>gi|384494999|gb|EIE85490.1| hypothetical protein RO3G_10200 [Rhizopus delemar RA 99-880]
Length = 246
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 94/192 (48%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL + + +LI E + +++ P+++ +P+ Q ++N +
Sbjct: 12 TVYIGNLDERCTE-SLIWELM---------LQAGPVVNVHLPKDRV---TQTHQN----Y 54
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F +E+ + A+ N + G +R+++A RK L D+ T+F+GNL
Sbjct: 55 GFVEFLTEEDADYAMKIMNQVRLYGKPVRVNKATSDRKNL--------DVGATLFIGNLD 106
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + V R+ R P KG ++ + E+++ I+ + +
Sbjct: 107 PEVDEKILYDTFSAFGLI---VNTPRISRDPDTGALKGFGFISYDNFESSDAAIEAMDGQ 163
Query: 406 -LRDRELRLSHA 416
L ++++ +S+A
Sbjct: 164 YLMNKQITVSYA 175
>gi|225559580|gb|EEH07862.1| nucleolar protein 13 [Ajellomyces capsulatus G186AR]
Length = 422
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 27/185 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP VKK + F G + S I + + + KQ + + A
Sbjct: 87 VWVGNLPFVVKKDDIRAFFTSSGTLKSSDITRIHLPEGP---------KQNGKAQNKGFA 137
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHI----------RLDRACPPRKKLKGEDAPLYDIKK 337
Y+ F S ++ E A+A + +I G R D+ K + +
Sbjct: 138 YVDFTSNEAMETAIAMSEQLINGRRALIKNAKSFVGRPDKPNDEATSNKASKLSAHAPSR 197
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VFVGNL FDV E + + F CG+ +E +++ KG A++ F+ +AA
Sbjct: 198 RVFVGNLGFDVTKEILEEHFKPCGV------IEHIQLATFQDSGKCKGYAWIEFEGIDAA 251
Query: 396 NLVIK 400
+ ++
Sbjct: 252 EVAMR 256
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ DEEI F ++ VE V + KG ++ F + + N ++K
Sbjct: 125 TEISDEEIKTFFGQFGNI---VE-VEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQT 180
Query: 406 LRDRELRLSHA 416
+ +E+ + A
Sbjct: 181 ISGKEVDVKKA 191
>gi|395833588|ref|XP_003789808.1| PREDICTED: RNA-binding protein 28 [Otolemur garnettii]
Length = 762
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 340 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVSHPDTEHSKGCAFAQFMTQEAAQ 395
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 396 KCLSAASAENEGGGLKLDGRQLKIDLA 422
>gi|71024015|ref|XP_762237.1| hypothetical protein UM06090.1 [Ustilago maydis 521]
gi|46101680|gb|EAK86913.1| hypothetical protein UM06090.1 [Ustilago maydis 521]
Length = 547
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 314 RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVI 373
R +R+ PPR++ D P + T FVGNL FDV + ++ F S ++R++
Sbjct: 71 RPERSYPPREEHPIPDKPPF----TAFVGNLSFDVMEADVENFFA-----PSKAVSIRIV 121
Query: 374 RHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
H KG YV F++++ + R +L R +R+S A+
Sbjct: 122 TG-HDGKPKGFGYVEFQSQDDLRAALDRTGTQLASRTVRISVAE 164
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
++ DEEI F ++ VE + + + R KG ++ F + + N ++K
Sbjct: 125 TEISDEEIKTFFGQFGNI---VEVEMPFDKQKNQR--KGFCFITFDSEQVVNELLKTPKQ 179
Query: 405 KLRDRELRLSHA 416
+ +E+ + A
Sbjct: 180 TISGKEVDVKKA 191
>gi|440302617|gb|ELP94924.1| nucleolar protein, putative [Entamoeba invadens IP1]
Length = 450
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKG--AILQKQINENADS 284
T+F+ N+ K+ KT+ FG + S RIR V D P G + N+ +
Sbjct: 196 TVFIQNVNKKLDYKTIGTFLRTFGRVVSYRIRCVA-RDVDTPTHGFYTYANMKCNDVKKT 254
Query: 285 VHAYIVFKSEQSTE-AALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
+ VFK+ ++ E A + G H+R D + + +G +K+TV +
Sbjct: 255 FSVFAVFKNPETAENIANQLDGLFYEGFHLRAD-VMSNKGQHRG-------VKRTVTIAG 306
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LP+ ++E++ + G VE V ++R + G +V F+ +E V
Sbjct: 307 LPYKTEEEDVRKWLDGKG---LKVERVALLRIKETQQCSGFGFVTFENKEDVEKVYGFNG 363
Query: 404 LKLRDRELRLS--HAQQNCTPSKRKD 427
L +R +R H QN K+K+
Sbjct: 364 DTLLNRTIRFGPYHKDQNKYLDKKKE 389
>gi|413942254|gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDT-KIPRKGAILQKQINENAD 283
++ ++VG +P + + F G S+ +ID P G I
Sbjct: 182 IKKVYVGGIPYYSSEDDIRSFFEACG--------SITMIDCMNFPESGKFRGIAI----- 228
Query: 284 SVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED-AP-LYDIKKTVFV 341
+ FK++ + + ALA + A +GG ++++ P + + ED AP L + ++V
Sbjct: 229 -----LTFKTDAAAQRALAMDGADMGGFYLKIQ---PYKHNREKEDFAPKLIEGYNRIYV 280
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GNLP+D+ D+++ + F E + ++R KG A+V F + +K
Sbjct: 281 GNLPWDITDDDLKKFF-----SECKISSIRFGTDKETGGFKGYAHVDFSDSASLAAALKL 335
Query: 402 RNLKLRDRELRLSHA 416
+++R +R+ A
Sbjct: 336 DQKVIKERPVRIRCA 350
>gi|242089287|ref|XP_002440476.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
gi|241945761|gb|EES18906.1| hypothetical protein SORBIDRAFT_09g001570 [Sorghum bicolor]
Length = 669
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 29/199 (14%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++ ++VG +P + + F G I + + P ++ R AIL
Sbjct: 200 IKKVYVGGIPYYSSEDDIRSFFEACGTITVIDCMTFP--ESGKFRGIAIL---------- 247
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED-AP-LYDIKKTVFVG 342
FK++ + + ALA + A +GG ++++ P + + ED AP L + ++VG
Sbjct: 248 -----TFKTDAAAQRALAMDGADMGGFYLKIQ---PYKHNREKEDFAPKLIEGYNRIYVG 299
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK--TREAANLVIK 400
NLP+D+ D+++ + F E ++ ++R KG A+V F T A L +
Sbjct: 300 NLPWDITDDDLKKFF-----SECNISSIRFGTDKETGEFKGYAHVDFSDGTSLAVALKLD 354
Query: 401 RRNLKLRDRELRLSHAQQN 419
++ +K R +R + A+++
Sbjct: 355 QKVIKGRPVRIRCAVAKKD 373
>gi|367042708|ref|XP_003651734.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
gi|346998996|gb|AEO65398.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 37/216 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
++FV NL +V ++ L K F K+GE+ S T I R L K
Sbjct: 132 SVFVRNLVFEVTEEHLQKAFSKYGEVAS----------TFIARDPRGLSKGF-------- 173
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPP-----RKKLKGEDAPLYDIKKTVF 340
++ F + ++ E A + N + G I R P +K K P + F
Sbjct: 174 GFVTFTTPEAVETACSQVNGSFWHGRRITCVRRTQPAPAGVKKPAKSPPGPTAQL----F 229
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+GN+P++ D E+ +LF G+ +L VRV +G A+ F + EAA K
Sbjct: 230 IGNIPYETTDAELNRLFRGIENLRD----VRVAVDRTTGWPRGFAHADFTSIEAAIEAKK 285
Query: 401 R-RNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSP 435
R L +R LR+ A T +R+ +P P
Sbjct: 286 RLEGTMLGNRLLRVDFA----TGYQRRSRSPPQQQP 317
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 98/220 (44%), Gaps = 27/220 (12%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +++GN+P + ++ ++ F + ++ ++ S P IP +L QIN D
Sbjct: 204 RRLYIGNIPFGIAEEVMVNFFNE--KMLEAKLCSAP----GIP----VLAVQIN--MDKN 251
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDAP------LYDI 335
A+I F+S + T A+AF+ V+ G +++ D A P + + P + D
Sbjct: 252 FAFIEFRSVEETTNAMAFDGIVLQGQSLKIRRPKDYAPIPGVDIMPKHVPGVISTVVPDG 311
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VF G LP + D+++ +L DL +A +++ KG + + +
Sbjct: 312 PHKVFCGGLPTYLSDDQVKELLSSFGDL----KAFNLVKDSGTSFSKGYCFFEYLDTDVT 367
Query: 396 NLVIKRRN-LKLRDRELRLSHAQQNCTPSKRKDVAPAVNS 434
+ I+ N + L D++L + A + D++ + S
Sbjct: 368 DGAIQGLNGMALGDKKLVVQRASVGAKVMEEYDISTDITS 407
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|327306303|ref|XP_003237843.1| RNA binding protein Rnp24 [Trichophyton rubrum CBS 118892]
gi|326460841|gb|EGD86294.1| RNA binding protein Rnp24 [Trichophyton rubrum CBS 118892]
Length = 391
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP ++ +++ F+ K G +DS +I V I D+ + RKG K
Sbjct: 91 VWIGNLPFTATRE-MLRTFLTSKSGILDS-QITRVHIPDSGMKRKGVKQNKGF------- 141
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------- 338
AY+ F S++ A+ + ++GG + + A ++ E A D+K
Sbjct: 142 -AYVDFTSQEIVGRAIQLSEELVGGRRVLIKDATNFDGRVVKE-ANGDDLKTAGGNPPST 199
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FD E + + F CG S+ + V KG A+V F++ +++
Sbjct: 200 KIFVGNLSFDTTKEHLEEHFSPCG------SISNIHVATFEDSGKCKGYAWVEFESTQSS 253
Query: 396 NLVIK 400
++
Sbjct: 254 QAAVR 258
>gi|315047428|ref|XP_003173089.1| nucleolar protein 13 [Arthroderma gypseum CBS 118893]
gi|311343475|gb|EFR02678.1| nucleolar protein 13 [Arthroderma gypseum CBS 118893]
Length = 403
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 46/232 (19%)
Query: 183 VIAKEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTL 242
V A E ++V EK K NET ++ GF +++GNLP ++ +
Sbjct: 59 VAAVSEGTEQVNETEKDKTDQNETNS---KKQRTGFG--------VWIGNLPFTATRE-M 106
Query: 243 IKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAA 300
++ F+ K G +DS +I V I D+ R+G K AY+ F S+ E A
Sbjct: 107 LRTFLTSKSGILDS-QITRVHIPDSGAKRRGVKQNKGF--------AYVDFTSQAVVELA 157
Query: 301 LAFNMAVIGGNHIRLDRACPPRKKL-----------KGEDAPLYDIKKTVFVGNLPFDVK 349
+A + ++GG + + A ++ G + P K +FVGNL FD
Sbjct: 158 IALSEELVGGRRVLIKDATNFDGRVVKEAEKDDSNTVGGNPP----SKKIFVGNLSFDTT 213
Query: 350 DEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
E + + F CG S+ V V KG A+V F++ ++ +
Sbjct: 214 KELLEEHFSPCG------SISNVHVATFEDSGKCKGYAWVEFESTTSSQAAV 259
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHGK-------IFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
++ DEEI F ++ VE + + + R KG ++ F + + N ++K
Sbjct: 125 TEISDEEIKTFFGQFGNI---VEVEMPFDKQKNQR--KGFCFITFDSEQVVNELLKTPKQ 179
Query: 405 KLRDRELRLSHA 416
+ +E+ + A
Sbjct: 180 TISGKEVDVKKA 191
>gi|296210709|ref|XP_002752086.1| PREDICTED: RNA-binding protein 28 isoform 1 [Callithrix jacchus]
Length = 760
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD +EE+ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 337 KTVFIRNLSFDSDEEELGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 392
Query: 397 LVI-------KRRNLKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 393 KCLLAASPENEAGGLKLGGRQLKVDLA 419
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L EF G + S R+ I +G+ + +
Sbjct: 237 TIFVGRLSWNIDDQWLKNEFEHIGGVQSARV---------IYERGSTRSRG--------Y 279
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-----PR--KKLKGEDAPLYDIKKT 338
Y+ F + E A+ + + G I D + PR + + D P + T
Sbjct: 280 GYVDFTDKSYAEKAVKEMHGKELDGRPINCDMSTSKPTVNPREDRAKRFGDMPS-EPSDT 338
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+F+GNL F+ ++IY+LF V +VR+ HP KG YV + + ++A
Sbjct: 339 LFLGNLSFNADRDQIYELFS----PHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKA 394
Query: 399 IKRRNLKLRD-RELRL 413
++ + D R +RL
Sbjct: 395 LETLQGEYIDNRPVRL 410
>gi|154281129|ref|XP_001541377.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411556|gb|EDN06944.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 397
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 27/185 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP VKK + F G + S I + + + KQ + + A
Sbjct: 87 VWVGNLPFVVKKDDIRAFFTSSGTLKSSDITRIHLPEGP---------KQNGKAQNKGFA 137
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHI----------RLDRACPPRKKLKGEDAPLYDIKK 337
Y+ F S ++ E A+A + +I G R D+ K + +
Sbjct: 138 YVDFTSNEAMETAIAMSEQLINGRRALIKNAKSFVGRPDKPNDEATSNKASKLSAHAPSR 197
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VFVGNL FDV E + + F CG+ +E +++ KG A++ F+ +AA
Sbjct: 198 RVFVGNLGFDVTKEILEEHFKPCGV------IEHIQLATFQDSGKCKGYAWIEFEGIDAA 251
Query: 396 NLVIK 400
+ ++
Sbjct: 252 EVAMR 256
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 91/238 (38%), Gaps = 45/238 (18%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA E E +K + ++E +F+GNL V + L +EF FGE+ VRI
Sbjct: 234 KKRKA--EEESASTPKKSKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRI 291
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ D R Y+ + S A + G I LD
Sbjct: 292 ----VTDRDSGRSRGF-------------GYVEYVSAADAAKAYKAKKDTELDGRKINLD 334
Query: 317 RAC--PPRKKLKG---------------EDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCG 359
A P + G + +P D T+FVGNLPF ++ + +LF
Sbjct: 335 YATGRPANNQQGGGFQDRAQARARSFGDQSSPESD---TLFVGNLPFSANEDSVQELFG- 390
Query: 360 LNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHA 416
+ S+ +R+ P KG YV F + + A N +L R +RL +
Sbjct: 391 ---EKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEAREAFNSLNGAELDGRPVRLDFS 445
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
++T+++G+L + + L F GE+ SV++ I KQ N++
Sbjct: 73 VKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKV---------------IRNKQTNQSEG- 116
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFV 341
+ ++ F S E L FN ++ GG + RL+ A + + +D+P Y T+FV
Sbjct: 117 -YGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDY----TIFV 171
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR-EAANLVIK 400
G+L DV D + ++F +SV+ +V+ KG +V F E + +
Sbjct: 172 GDLAADVSDHHLTEVF---RTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTE 228
Query: 401 RRNLKLRDRELRLSHA 416
+ + R +R+ A
Sbjct: 229 MQGVLCSTRPMRIGPA 244
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|170055729|ref|XP_001863711.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Culex quinquefasciatus]
gi|167875586|gb|EDS38969.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Culex quinquefasciatus]
Length = 196
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTRE 393
I+ T +V NLPF++ + ++ ++F + SV V V+R P R KG+A+VLF ++
Sbjct: 9 IRNTAYVSNLPFNLTNIDLRKIF----EKHGSVVRVTVLRDPQTRQSKGVAFVLFGNAKD 64
Query: 394 AANLVIKRRNLKLRDRELRLSHAQQN 419
A N+++ R LR S A+ N
Sbjct: 65 ADQCCQAMNNVEMFGRTLRASIAKDN 90
>gi|291391166|ref|XP_002712118.1| PREDICTED: RNA binding motif protein 28 isoform 3 [Oryctolagus
cuniculus]
Length = 626
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 201 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFTTQEAAQ 256
Query: 397 LV-------IKRRNLKLRDRELRLSHA 416
++ LKL R+L++ A
Sbjct: 257 KCLAAASPEVEGGGLKLDGRQLKVDLA 283
>gi|403372370|gb|EJY86082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 695
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 28/187 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+ V NL +V ++ L F +FG+I S+++ + P + + +A
Sbjct: 173 LLVKNLDKEVTQQELFDSFKQFGDIQSLKLETYP------------------DGSSRGYA 214
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I F+SE+ E AL A N A I G I ++R +K + P +FV NLP
Sbjct: 215 FIQFQSEEEAEKALNAMNQAEIKGKKIEINR----HEKKATRENPQQTKFNNLFVKNLPK 270
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
D+++ LF ++ES V V R + K YV FK + A + N K
Sbjct: 271 GTDDDQLKGLFGKFGEIES----VTVQRDEQGNL-KDYGYVCFKEPDHAEAAVLEMNKKQ 325
Query: 407 RDRELRL 413
D + +
Sbjct: 326 IDDQFLI 332
>gi|291391164|ref|XP_002712117.1| PREDICTED: RNA binding motif protein 28 isoform 2 [Oryctolagus
cuniculus]
Length = 755
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 330 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFTTQEAAQ 385
Query: 397 LV-------IKRRNLKLRDRELRLSHA 416
++ LKL R+L++ A
Sbjct: 386 KCLAAASPEVEGGGLKLDGRQLKVDLA 412
>gi|291391162|ref|XP_002712116.1| PREDICTED: RNA binding motif protein 28 isoform 1 [Oryctolagus
cuniculus]
Length = 767
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 342 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFTTQEAAQ 397
Query: 397 LV-------IKRRNLKLRDRELRLSHA 416
++ LKL R+L++ A
Sbjct: 398 KCLAAASPEVEGGGLKLDGRQLKVDLA 424
>gi|325089583|gb|EGC42893.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 422
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 27/185 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VGNLP VKK + F G + S I + + + KQ + + A
Sbjct: 87 VWVGNLPFVVKKDDIRAFFTSSGTLKSSDITRIHLPEGP---------KQNGKAQNKGFA 137
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHI----------RLDRACPPRKKLKGEDAPLYDIKK 337
Y+ F S ++ E A+A + +I G R D+ K + +
Sbjct: 138 YVDFTSNEAMETAIAMSEQLINGRRALIKNAKSFVGRPDKPNDEATTNKASKLSAHAPSR 197
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
VFVGNL FDV E + + F CG+ +E +++ KG A++ F+ +AA
Sbjct: 198 RVFVGNLGFDVTKEILEEHFKPCGV------IEHIQLATFQDSGKCKGYAWIEFEGIDAA 251
Query: 396 NLVIK 400
+ ++
Sbjct: 252 EVAMR 256
>gi|384490131|gb|EIE81353.1| hypothetical protein RO3G_06058 [Rhizopus delemar RA 99-880]
Length = 423
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G + TI+ G L + + + F GEI VRIR + +N
Sbjct: 196 GSDVYTIWCGGLNYQSTADDVREFFGSCGEIKDVRIR---------------MDDATGKN 240
Query: 282 ADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA-CPPRKKLKGEDAPLYDIKKTVF 340
H + F +++ EAALA + G IRLD A R+++K E++ K VF
Sbjct: 241 RGFCH--VDFATQEGKEAALAMSGNEFMGRKIRLDGADGSTRQRVKKEESYSSATSK-VF 297
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMR-VG--KGIAYVLFKTREAAN 396
+ NL D DE+ ++ L + S V IR P+ R G KGI Y+ F+T+E A
Sbjct: 298 IANLNHD-HDEQSHR--AALTEAFSQFGTIVGDIRLPYNRETGGLKGIGYIEFETKEQAE 354
Query: 397 LVIK-RRNLKLRDRELRLSHAQQN 419
+K +++ R LR + +N
Sbjct: 355 AAVKGMSGVEINGRPLRTDFSGEN 378
>gi|327281621|ref|XP_003225545.1| PREDICTED: nucleolin-like [Anolis carolinensis]
Length = 696
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT+FV NLP V K+ L +EF ++V +R V R G N+ +
Sbjct: 373 RTLFVKNLPFSVSKEDLQEEF-----DNAVEVRLV-------SRDG---------NSKGM 411
Query: 286 HAYIVFKSEQSTEAALAFNMAV-IGGNHIRLDRACPPRKK--LKGEDAPLYDIKKTVFVG 342
AYI FKSE E L + + G I +D ++ KG D KT+ V
Sbjct: 412 -AYIEFKSEAEAEKTLEEKQGLEMSGRAIVIDYTGEKSQQDTRKGGKGGQSD-SKTLVVN 469
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIK 400
NL +D +E + ++F E IR P G KG A+V F T E A +
Sbjct: 470 NLSYDATEESLQEVF----------EKASAIRIPQNNQGRPKGFAFVDFATAEDAKEAMN 519
Query: 401 R-RNLKLRDRELRLSHAQQN 419
N ++ R +RL + Q
Sbjct: 520 SCNNTEIEGRAIRLEFSTQG 539
>gi|240848911|ref|NP_001155674.1| heterogeneous nuclear ribonucleoprotein-like [Acyrthosiphon pisum]
gi|239790977|dbj|BAH72014.1| ACYPI006706 [Acyrthosiphon pisum]
Length = 283
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + +K L + F+++GEI ++ +++ P
Sbjct: 33 RKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPAT-----------------GRSRG 75
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+I+FKS A A VI G I P + K K E VFVG LP
Sbjct: 76 FAFIIFKSVDGLNNAFAAGDHVINGKKID-----PKKAKAKQE---------KVFVGGLP 121
Query: 346 FDVKDEEIYQLFCGLN---DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
DV ++EI + F +LE + ++ R KG ++ +++ + + K
Sbjct: 122 SDVTNDEIKEFFGKWGVIVNLEVPFDKMKNQR-------KGYCFITYESSDKVQDLFKTA 174
Query: 403 NLKLRDRELRLSHA 416
++ +E+ + A
Sbjct: 175 KQTIKGKEVDVKKA 188
>gi|50291529|ref|XP_448197.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527508|emb|CAG61148.1| unnamed protein product [Candida glabrata]
Length = 380
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 39/265 (14%)
Query: 195 VGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
V EK + D E++D E D K +++GNL K+ + + + +
Sbjct: 85 VAEKERGKDGESKDS-AKESESSVKDSRK--NGVWIGNLSFDTTKEDITRFIVGKTKGTD 141
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
V I ++ +P + + + + Y+ FK+++ EAA+ + + + G ++
Sbjct: 142 VEITEEDLVRVNMP----LAKNDGKQIKNKGFCYVDFKTQEQVEAAIKLSESQLNGRNLL 197
Query: 315 LDRACPPRKKLKG--EDAPLYDIKKT-----VFVGNLPFDVKDEEIYQLF--CGLNDLES 365
+ + K +G + L + K +FVGNL FD DE + + F CG
Sbjct: 198 IKNS----KSYEGRPDKTDLVSMSKNPPSRILFVGNLSFDTTDELLRKHFQHCG------ 247
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL-KLRDRELRLSHAQQNCTPS- 423
+ +R+ KG A+V FK E A +K ++ K+ R LR+ +
Sbjct: 248 EIVKIRMATFQDSGKCKGFAFVDFKNEEGATNALKDKSCRKIAGRPLRMEFGEDRSKRQV 307
Query: 424 -KRKDVAP----------AVNSPPK 437
KR D AP AV+ PP+
Sbjct: 308 RKRPDAAPKKSFDLPNHDAVSRPPR 332
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLN---DLESSVEAVRVIRHPHMR------VGKGIAY 386
K V++GNL FD E+I + G D+E + E + + P + KG Y
Sbjct: 112 KNGVWIGNLSFDTTKEDITRFIVGKTKGTDVEITEEDLVRVNMPLAKNDGKQIKNKGFCY 171
Query: 387 VLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTL 446
V FKT+E IK +L R L + +++ + D+ +PP SR L
Sbjct: 172 VDFKTQEQVEAAIKLSESQLNGRNLLIKNSKSYEGRPDKTDLVSMSKNPP------SRIL 225
Query: 447 GSGNRS 452
GN S
Sbjct: 226 FVGNLS 231
>gi|134083605|emb|CAL00520.1| unnamed protein product [Aspergillus niger]
Length = 381
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 28/192 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 197 TVFIGNVFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 238
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A NM + G + + A + +AP +T+++GNLP
Sbjct: 239 GYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 294
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D ++ +LF D+++ V+ +RV +G A+ F + +A + K
Sbjct: 295 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENK 350
Query: 406 L-RDRELRLSHA 416
L R LRL ++
Sbjct: 351 LPYGRRLRLDYS 362
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 90/192 (46%), Gaps = 31/192 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL +V ++ L + F++ G P+ + +P+ Q +
Sbjct: 30 TVYVGNLDPQVTEEVLWELFLQAG----------PVTNVYVPKDRVTSTHQ-------GY 72
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F++E+ E + NM + G I+++++ R+ ++ +F+GNL
Sbjct: 73 GFVEFRNEEDAEYGIKILNMVKLFGKPIKVNKSVGDRRD---------EVGANLFIGNLD 123
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
D+ ++ +Y F + + +++R P KG +V + + EA++ I+ N +
Sbjct: 124 PDIDEKLLYDTFSAFGVV---INTPKIMRDPDNGASKGFGFVAYDSFEASDAAIEAMNGQ 180
Query: 406 -LRDRELRLSHA 416
L ++++ + +A
Sbjct: 181 FLCNKQINVQYA 192
>gi|431911731|gb|ELK13879.1| RNA-binding protein 28 [Pteropus alecto]
Length = 758
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 334 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 389
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
++ + LKL R+L++ A
Sbjct: 390 KCLEAASPETEGGGLKLDGRQLKVDLA 416
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 42/209 (20%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G L +++VG+L + V + L ++F G I S+R+ + +
Sbjct: 7 GYPLASLYVGDLHVDVTEAMLYEKFSPAGSIISIRV-----------------CRDVASR 49
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL---DRACPPRKKLKGEDAPLYDIKK 337
+AYI F+ E AL N VI G IR+ R RK G
Sbjct: 50 RSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGN--------- 100
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+F+ NL + ++ +Y F ++ S +V+ H +G +V F+TREAA+
Sbjct: 101 -IFIKNLDDSIDNKALYDTFSTFGNILS----CKVVCDEHG--SRGFGFVHFETREAASQ 153
Query: 398 VIKRRN-LKLRDRELRLSHAQQNCTPSKR 425
I N + L DR++ Q C P+ R
Sbjct: 154 AISTMNGMLLNDRKV----GAQPCCPAGR 178
>gi|320580999|gb|EFW95221.1| RNA-binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 343
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL ++ +I ++ E I I IP+K A K A
Sbjct: 69 VWIGNLAYDTTREDIISFLVRKSEEMEPAITENDITRVNIPKKTAHKIKGF--------A 120
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD--IKKTVFVGNLP 345
YI FKS++ E A+A + + G + + A + + + PL + +FVGNL
Sbjct: 121 YIDFKSQEHVETAIALSEQELNGRRLLIKDANSFEGRPQKAEEPLSKNPPSRVLFVGNLS 180
Query: 346 FDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKR 401
FD +E + + F CG E VR+ G KG ++ FK E +K
Sbjct: 181 FDTTEELLEEHFRHCG--------EIVRIRMATFEDSGKCKGFCFIDFKDIEGPTNALKD 232
Query: 402 RNL-KLRDRELRLSHAQ 417
+ + KL +R LRL + +
Sbjct: 233 KTVRKLINRPLRLEYGE 249
>gi|464252|sp|P20397.3|NUCL_XENLA RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|64937|emb|CAA44805.1| nucleolin [Xenopus laevis]
Length = 651
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ E AL I G +++++A K E+ D +T+FV N+P
Sbjct: 275 FGYVDFSSEEEVEKALKLTGKKILGTEVKIEKAMAFDKNKTAENKKERD-SRTLFVKNIP 333
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRR 402
+ EE+ ++F E + IR P + G KGIAYV F + AN ++ +
Sbjct: 334 YSTTVEELQEIF----------ENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEK 382
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP V L F + G ++ V + I D R
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----IYDKLTGRSRGF-------------G 130
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ S + EAA+ FN ++ G +R++ PP ++ AP + + V+VGNL +
Sbjct: 131 FVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSRRAPRGEANR-VYVGNLSW 189
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLK 405
V + + LF G E V +VI +G +V + + E N V
Sbjct: 190 GVDNAALANLFSG----EGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGAD 245
Query: 406 LRDRELRLSHAQQNCTPSKRK 426
+ R++R++ A+ P +R+
Sbjct: 246 MDGRQIRVTVAESK--PPRRQ 264
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNLP + + + F + G +D+V+I I D R A
Sbjct: 120 LFVGNLPYTMTSGEISQTFSEAGRVDNVQI----IYDKVTDRSRGF-------------A 162
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPR--KKLKGEDAPLYDIKKT-----V 339
++ + + A+ FN A++GG R++ PR ++ G A + ++ +
Sbjct: 163 FVTMATAEEAATAIQMFNGALLGGRTARVNYPEVPRGGERAVGSAAATRENRRDDGTFKI 222
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
+ GNL + V+ + + F G L + RVI +G +V F+T E A +
Sbjct: 223 YAGNLGWGVRADALRAAFEGQPGLLDA----RVIFERDSGRSRGFGFVSFRTAEDAQAAL 278
Query: 400 KRRN-LKLRDRELRLSHAQQNCT 421
+ + ++L R LRLS A+QN T
Sbjct: 279 EALDGVELEGRPLRLSMAEQNPT 301
>gi|340914918|gb|EGS18259.1| RNA-binding protein rnp24-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 436
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFI--KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNLP V K L K + G I I V + K P G+ K+ EN
Sbjct: 93 VWIGNLPFSVTKADLRKWLVDNSGGVITEDLITRVHMPTNK-PMAGS---KRTFENKG-- 146
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT------- 338
AY+ F + ++ AA+A + + G + + A + K E+ P + K
Sbjct: 147 FAYVDFATYEANTAAIALSETELNGRRLLIKDANNYEGRPKKEE-PEAAVAKIPEGRSST 205
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL F+ +++++ F CG + V+V KG +V+F+ EAA
Sbjct: 206 KIFVGNLAFNTTEDDLWAHFEKCG------KIRWVKVATFEDSGKCKGYGWVMFEEPEAA 259
Query: 396 NLVIK 400
+K
Sbjct: 260 QWAVK 264
>gi|321468303|gb|EFX79288.1| hypothetical protein DAPPUDRAFT_104375 [Daphnia pulex]
Length = 197
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
TV+V N PF + + +++Q+F +V V +++H R KG+A++++KT+E A+
Sbjct: 10 TVYVSNFPFSLTNNDLHQIFGQYG----TVIKVTIVKHRLTRKSKGVAFIVYKTQEEASN 65
Query: 398 VIKRRNLK-LRDRELRLSHAQQN 419
I++ N K + R L+ S A+ N
Sbjct: 66 CIQQTNQKEMFGRILKSSIAKDN 88
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++ G L KV + L + G P++ +PR Q
Sbjct: 14 TVYCGGLDEKVTEDLLWELMQNVG----------PVVHVHMPRDKVTGMHQ-------CF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F+SE+ + A+ NM + G +R+++A RK + D+ +F+GNL
Sbjct: 57 GFVEFRSEEDADYAVKIMNMVRMYGKPLRVNKASQDRKTV--------DVGANLFIGNLA 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-L 404
+V ++++Y F + + +V+ P KG +V F + EAA+ I+ N
Sbjct: 109 AEVDEKDLYDTFSAFGGI---TQPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGA 165
Query: 405 KLRDRELRLSHA 416
L R + + +A
Sbjct: 166 YLGGRPICVQYA 177
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 198 KRKKADNETEDMLV---HRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDS 254
K++KA+ E E++ V + EE + TI+ G + + + + F + GEI
Sbjct: 116 KKRKAEEEQEEIPVPKAAKTEENY--------TIWCGGISFEATADDVREFFGECGEIKD 167
Query: 255 VRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIR 314
VRIR + + +N H I F ++++ +AA+A + G IR
Sbjct: 168 VRIR---------------IDEATGKNRGFCH--IDFATQEAKDAAVALSGNEFLGRRIR 210
Query: 315 LDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQ--LFCGLNDLESSVEAVRV 372
+D A +K P KK VFV NL D DE+ ++ L + + V +R+
Sbjct: 211 IDGADGGKKT--NTSGPASATKK-VFVANLNRDY-DEDAHRTALTEAFQEFGTIVGDIRL 266
Query: 373 IRHPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQQN 419
+ KGI Y+ F+T E A +K N +++ R LR + N
Sbjct: 267 PYNRESGALKGIGYIEFETTEQAEAAVKGMNGVEINGRPLRTDFSGDN 314
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 27/195 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VG L V L E FGE+ S R++ + T +G
Sbjct: 209 VWVGQLSWNVDNDWLKSEMEVFGEVTSARVQ---LDRTTGKSRG--------------FG 251
Query: 288 YIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKK----TVFVG 342
Y+ F + + + A + G IRLD + P + D + T+F+G
Sbjct: 252 YVDFATAAAAKKAFEEGQGKEVDGRAIRLDLSTPKGDVTENRAKKFNDQRSAPSSTLFIG 311
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI-KR 401
NL FD+ +++++ F V VR+ + P KG YV F +E+A +
Sbjct: 312 NLSFDISEDDVWNAFS----EHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAALDAM 367
Query: 402 RNLKLRDRELRLSHA 416
+L R LRL +
Sbjct: 368 TGQELAGRPLRLDFS 382
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + + + F + GE+ VR+ P D+ P+
Sbjct: 307 TLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDP--DSGRPKG---------------F 349
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F +++S +AAL A + G +RLD + P
Sbjct: 350 GYVEFAAQESAQAALDAMTGQELAGRPLRLDFSTP 384
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 31/228 (13%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA+ E ++ K EE +EG ++ +FVGN+ + + L +EF FGEI R
Sbjct: 190 KKRKAEEVDEPIVKKSKVEEPAAEEG--IKNLFVGNMSWNIDEDWLRREFEGFGEIVGCR 247
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD 316
+ I D + R + + AD+ A K E + G + +D
Sbjct: 248 V----ITDRETGRAKGFGYVEFSNAADAAKAQ---KEMHEYE---------LDGRQLNVD 291
Query: 317 RACPPRK--KLKGEDAPLYDIKK-----TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
+ P K G A Y K+ T+F+GN+ F+ +E I ++F S+
Sbjct: 292 FSTPRAKPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYG----SITR 347
Query: 370 VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELRLSHA 416
V + KG YV F +++ A ++ N + + R +R+ +A
Sbjct: 348 VSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYA 395
>gi|237838475|ref|XP_002368535.1| nucleolar phosphoprotein nucleolin, putative [Toxoplasma gondii
ME49]
gi|211966199|gb|EEB01395.1| nucleolar phosphoprotein nucleolin, putative [Toxoplasma gondii
ME49]
gi|221505826|gb|EEE31471.1| nucleolar phosphoprotein, putative [Toxoplasma gondii VEG]
Length = 705
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 321 PRKKLKGEDAPLYD-IKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHP 376
P+ +L+ + + D ++ +F G LP+ + E+ +LF CG R+
Sbjct: 427 PKARLQTKGGGVVDKLRTEIFCGGLPYSTTESELKELFESDCGPT--------TRI---- 474
Query: 377 HMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELR--LSHAQQNCTP 422
M GKGIA++ F+T EAA ++ N + R LR L+ +QN P
Sbjct: 475 KMLEGKGIAFITFETEEAAQKAVEYNNTQYNGRTLRINLTADKQNHQP 522
>gi|238483099|ref|XP_002372788.1| nucleic acid-binding protein [Aspergillus flavus NRRL3357]
gi|220700838|gb|EED57176.1| nucleic acid-binding protein [Aspergillus flavus NRRL3357]
Length = 227
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVGNL V L K+ K+G ++SV I D + KG
Sbjct: 48 TVFVGNLFYDVTADDLRKQMEKYGVVESVYI----TFDNRGMSKG--------------F 89
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S S A+ A +M V G + + A + + L I +T+++GNLP
Sbjct: 90 GYVQFDSIDSARRAIDAMHMRVYEGRRVIVAFAQNNIDQHRN----LRPISRTLYLGNLP 145
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D +I +LF + +V VRV + +G A+ F E+A + + K
Sbjct: 146 FEMTDRDINELFRDI----VNVIDVRVSVDRRTGMFRGFAHAEFINVESARAAFEILSRK 201
Query: 406 L-RDRELRLSHAQQNCTPSKRKD 427
R+LRL ++Q N + +D
Sbjct: 202 APYGRKLRLDYSQTNRRADRLED 224
>gi|426227973|ref|XP_004008089.1| PREDICTED: RNA-binding protein 28 isoform 2 [Ovis aries]
Length = 608
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 184 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 239
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
++ + LKL R+L++ A
Sbjct: 240 KCLEAASPEAEGGGLKLDGRQLKVDLA 266
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L KEF G + S R+ I +G + +
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARV---------INERGTDRSRG--------Y 184
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIKK 337
Y+ F+++ E A+ I G I D + R K G D P +
Sbjct: 185 GYVDFENKSYAEKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFG-DTP-SEPSD 242
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T+F+GNL F+ + I++LF V +VR+ HP KG YV F + E +
Sbjct: 243 TLFLGNLSFNADRDTIFELFA----KHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKK 298
Query: 398 VIKRRNLKLRD-RELRLSHA 416
++ + D R +RL ++
Sbjct: 299 ALESLQGEYIDNRPVRLDYS 318
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + T+ + F K GE+ SVRI + P +T+ P+
Sbjct: 243 TLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHP--ETEQPKG---------------F 285
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S + ++ AL + I +RLD + P
Sbjct: 286 GYVQFSSLEDSKKALESLQGEYIDNRPVRLDYSSP 320
>gi|60359912|dbj|BAD90175.1| mKIAA0117 protein [Mus musculus]
Length = 122
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 371 RVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA-------QQNCTPS 423
R++R+P VG+G YVLF+ +A +L +K N +L R+LR+ + QQN PS
Sbjct: 1 RIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNPS 60
Query: 424 KRKDV 428
+KDV
Sbjct: 61 LKKDV 65
>gi|302655824|ref|XP_003019695.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
gi|291183434|gb|EFE39050.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
Length = 1402
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 58/254 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV N P + + + F +GEI VR S+ N
Sbjct: 984 TIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKF------------------NTHRRF 1025
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F S S AA + +G + + P ++ A Y+ + ++V N+P+
Sbjct: 1026 CYVQFTSSSSAYAATELDKKDLGDGLELVVKISDPSQRQARSGA--YEEGREIYVCNIPY 1083
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR------------ 392
+ ++ +LF D+ES +R P G +G +V F T+
Sbjct: 1084 KTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFGFVTFATKLDRAVILTSDKD 1136
Query: 393 -EAANLVIKRRNLKLRDRELRLSHA-----QQNCTPSKRKDVAPAVN---------SPPK 437
A L + + K R+ +RLS QN S+ + +PA N SPP
Sbjct: 1137 QSTAALAMNEKTFKGRELNVRLSTNTGAKRHQNTIVSRSE--SPATNAQRNGTSTASPPP 1194
Query: 438 KFVLDSRTLGSGNR 451
+ D ++ G G+R
Sbjct: 1195 GSLPDGQSKGKGDR 1208
>gi|340939568|gb|EGS20190.1| splicing factor (prp24)-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1069
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 93/232 (40%), Gaps = 59/232 (25%)
Query: 186 KEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE 245
K EE + G G KR K +N E+ L +E ++FV +LP +V + L +
Sbjct: 570 KREETPEDGTGSKRAKNENNDEERLKRDREN---------TSVFVLDLPAEVTQTKLKQF 620
Query: 246 FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM 305
F ++G I+++ I+ R G ++ A + FK+ ++AL +
Sbjct: 621 FREYGHINNIDIQK---------RDGEVV------------ALVEFKTSDEAKSALLRDG 659
Query: 306 AVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDL 363
+G +R+ P D T+FV N P D + I LF CG
Sbjct: 660 KYLGDRVVRVQ--------------PATDC--TLFVTNYPPDADERYIRHLFKDCG---- 699
Query: 364 ESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRNLKLRDRELRL 413
+ IR P ++ + YV F+ REAA K L D + +L
Sbjct: 700 -----EIHSIRFPSLKYNTKRRFCYVTFRNREAATAATKLDGKPLSDGKYKL 746
>gi|426227971|ref|XP_004008088.1| PREDICTED: RNA-binding protein 28 isoform 1 [Ovis aries]
Length = 749
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 325 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 380
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
++ + LKL R+L++ A
Sbjct: 381 KCLEAASPEAEGGGLKLDGRQLKVDLA 407
>gi|326507746|dbj|BAJ86616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 192
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A++ SE+ +AL N++ + I++D A P +K+ AP+ K VFVGNL
Sbjct: 38 AFVTMGSEEEALSALKNLNLSTLNDRTIKVDFAKPKKKQPAVPSAPVE--KNVVFVGNLT 95
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHM-RVGKGIAYVLFKTREAANLVIKRRNL 404
+ V+ + +LF V++V VI H R G +V F ++E A I N
Sbjct: 96 WRVRSRHLRELFAST----PGVQSVEVIFHTTTPRRSAGYGFVSFSSKEEAEAAISTFNG 151
Query: 405 K 405
K
Sbjct: 152 K 152
>gi|221484195|gb|EEE22491.1| nucleolar phosphoprotein, putative [Toxoplasma gondii GT1]
Length = 705
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 321 PRKKLKGEDAPLYD-IKKTVFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHP 376
P+ +L+ + + D ++ +F G LP+ + E+ +LF CG R+
Sbjct: 427 PKARLQTKGGGVVDKLRTEIFCGGLPYSTTESELKELFESDCGPT--------TRI---- 474
Query: 377 HMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELR--LSHAQQNCTP 422
M GKGIA++ F+T EAA ++ N + R LR L+ +QN P
Sbjct: 475 KMLEGKGIAFITFETEEAAQKAVEYNNTQYNGRTLRINLTADKQNHQP 522
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 25/207 (12%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPPRKKLKGE-----DAPLYD 334
AY+ F +++S ALA N + G IR+ +RA K ++ + D+P +
Sbjct: 188 AYVEFYTQESVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQTVEVADSP-FT 246
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK-TRE 393
I+ T G+L + + EI Q+F ++ S V ++R PH + G AY+ FK T E
Sbjct: 247 IQVTGLTGSLS-SISEVEIRQMFSPFGNIIS----VEILRDPHSNLPLGQAYIKFKRTSE 301
Query: 394 AANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSN 453
A V + + +++++A S + ++ ++ D L SG +
Sbjct: 302 AKEAVTAMNGFDIGGQTIKVAYA---TGASAKGRLSTHGEVDIERLDEDGGGLISG--AT 356
Query: 454 SKVAMSYQGLQASKSCTQKKVHSGSSG 480
+K+A+ ++ LQ + S T + SGSSG
Sbjct: 357 NKIALMHK-LQRTSSDTNSHLSSGSSG 382
>gi|452001712|gb|EMD94171.1| hypothetical protein COCHEDRAFT_1020240 [Cochliobolus
heterostrophus C5]
Length = 325
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL +V L + F +FG+I+SVR+ + D + +G A
Sbjct: 138 LYIGNLYYEVTPDQLKRVFSRFGDIESVRM----VYDNRGLSRG--------------FA 179
Query: 288 YIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLK-----GEDAPLYDIKKTVFV 341
Y+ +K+ +AA+ +M V G ++ + P + K GE P KT+F+
Sbjct: 180 YVEYKNVSDAQAAIDNLDMQVFEGRNLVVQYHSPKYQTTKARSPNGEPNP---PTKTLFI 236
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKR 401
GN+ F++ D+++ LF + + V VRV +G A+ F + A+ +
Sbjct: 237 GNMSFEMSDKDLNDLFRDIRN----VTDVRVAIDRRTGQPRGFAHADFI--DVASATRAK 290
Query: 402 RNLK---LRDRELRLSHAQQNCTPSKRK 426
LK + R+LR+ + N ++K
Sbjct: 291 EVLKEKIIYGRQLRVDFSTSNTQTQRQK 318
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL V L EF K G ++ VR+ + D + KG
Sbjct: 142 TIYVGNLFFDVTAGDLKNEFSKCGPVEGVRL----LYDYRGVSKG--------------F 183
Query: 287 AYIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F ++ E A+A + G H+ ++ A K D P +T+++GN+P
Sbjct: 184 GYVKFHDVETAEKAVALMHGQLFEGRHLAVNFARVELDKPMNHD-PTKPPTRTLYIGNIP 242
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D ++ +LF D+++ ++ VRV +G + F E+A + K
Sbjct: 243 FEMTDRDLNELF---KDVDNIID-VRVAVDRRTGRARGFVHADFTDIESARKAFTLLSTK 298
Query: 406 L-RDRELRLSHAQQN-----CTPSKRKD 427
R LR+ ++ N P KR D
Sbjct: 299 TPYGRPLRIDYSHSNIKIQPAGPPKRDD 326
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|300798746|ref|NP_001178319.1| RNA-binding protein 28 [Bos taurus]
gi|296488281|tpg|DAA30394.1| TPA: RNA binding motif protein 28 isoform 2 [Bos taurus]
Length = 610
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 186 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 241
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
++ + LKL R+L++ A
Sbjct: 242 KCLEAASPEAEGGGLKLDGRQLKVDLA 268
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 323 KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGK 382
K+L G L K TV+V NL F + + +++ +F + V +++ R K
Sbjct: 5 KRLHGSSGGLVPSKSTVYVSNLDFSLTNNDLHTIFSTF----GKIGKVTIVKDKQTRESK 60
Query: 383 GIAYVLFKTREAANLVIKRRNLK-LRDRELRLSHAQQN 419
G+A++L+ +R+ A+ +K N K L R L++S A+ N
Sbjct: 61 GVAFILYASRDDAHAAVKTMNGKILNKRTLKVSIAEDN 98
>gi|66819971|ref|XP_643642.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60471524|gb|EAL69480.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 299
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 36/193 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG LP V + L + F + G+I +++I +N N V A
Sbjct: 78 VFVGQLPSGVTEYDLKEYFSECGDISNIKI--------------------LNSNPQRVAA 117
Query: 288 YIVFKSEQSTEAALAFNMAVIGG-NHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I F E+ + A+ +N G +R++ A K GE P T+ N+ F
Sbjct: 118 FITFADEKGRDTAITYNGKDFNGQGSLRINGA--NSKPSDGEGEPT-----TIVCRNIAF 170
Query: 347 DVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
V + + + F CG S+ V + + KG A+V F + +A I
Sbjct: 171 TVDETLVKEFFSKCG------SISRVSLPVYEDSGRLKGFAFVSFDSEDAVEKAIALTGT 224
Query: 405 KLRDRELRLSHAQ 417
K RE+++ +Q
Sbjct: 225 KFEGREIQVERSQ 237
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 31/202 (15%)
Query: 216 EGFDDEGKL--LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
+GF E ++ T+FV N P + + + F ++GE IID + P
Sbjct: 894 DGFTIEVQIGTCSTLFVTNFPPEADENYIRGLFREYGE----------IIDVRFP----- 938
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
+ N Y+ FK+ ++ +A + +G + P +K + P+Y
Sbjct: 939 ---SLKYNTHRRFCYVQFKTAEAAHSATKLDGTTVGKGLTLTAKISDPSRK-QDRHGPIY 994
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ + + V N+ F + ++ +LF S V ++R P G KG YV+F
Sbjct: 995 E-GREIHVSNVDFKASERDVQELF-------SKYGTVELVRLPRKVDGGSKGFGYVVFSN 1046
Query: 392 REAANLVIKRRNLKLRDRELRL 413
+E A + + R R L +
Sbjct: 1047 KEEATAALAMDGQEYRSRTLHV 1068
>gi|296488280|tpg|DAA30393.1| TPA: RNA binding motif protein 28 isoform 1 [Bos taurus]
Length = 751
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 327 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 382
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
++ + LKL R+L++ A
Sbjct: 383 KCLEAASPEAEGGGLKLDGRQLKVDLA 409
>gi|326478692|gb|EGE02702.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 1545
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 31/192 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV N P + + + F +GEI VR S+ N
Sbjct: 878 TIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKF------------------NTHRRF 919
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F S S AA + IG + + P ++ A Y+ + ++V N+P+
Sbjct: 920 CYVQFTSSSSAYAATELDKKDIGDGLELVVKISDPSQRQARSGA--YEEGREIYVCNIPY 977
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTRE--AANLVIKRR 402
+ ++ +LF D+ES +R P G +G +V F T++ A L + +
Sbjct: 978 KTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFGFVTFATKDQSTAALAMNEK 1030
Query: 403 NLKLRDRELRLS 414
K R+ +RLS
Sbjct: 1031 TFKGRELNVRLS 1042
>gi|440907745|gb|ELR57852.1| RNA-binding protein 28 [Bos grunniens mutus]
Length = 751
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL+ VR++ HP KG A+ F T+EAA
Sbjct: 327 KTVFIRNLSFDSEEEDLGELLQQFGDLKY----VRIVLHPDTEHSKGCAFAQFMTQEAAQ 382
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
++ + LKL R+L++ A
Sbjct: 383 KCLEAASPEAEGGGLKLDGRQLKVDLA 409
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E E K E +D G + +FVGNL + + L +EF +FGEI R+
Sbjct: 167 KKRKADDEEETAAKKSKTE-VEDTGS--KNLFVGNLSWNIDDEWLYREFEEFGEITGARV 223
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIRL 315
I D + R KG Y+ F S + A A A+I G +
Sbjct: 224 ----ISDRESGRSKG--------------FGYVEFANSADAAAALKAKKGALIDGREANV 265
Query: 316 DRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D + P P+ + D K T+FVGN+ F+ ++ + + F +
Sbjct: 266 DFSTPRDNAAPKDRANARAQTYGDAKNPESDTLFVGNISFEANEDMLGEAFG----AHGT 321
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTRE-AANLVIKRRNLKLRDRELRLSHAQQNCTPSKR 425
V VR+ KG Y+ F + E A N + + R +RL +A TP
Sbjct: 322 VVNVRLPTDMDSGNPKGFGYITFSSVEDAKNAMENMMGADVGGRPVRLDYA----TPRPE 377
Query: 426 KDV 428
+D
Sbjct: 378 RDA 380
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|156088367|ref|XP_001611590.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798844|gb|EDO08022.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 643
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 339 VFVGNLPFDVKDEEIYQLF---CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
++ G LPF + +EE+ +LF CG VE V ++ KGIA++ FKT EAA
Sbjct: 385 IYCGGLPFQITEEEVKELFEGDCG------PVERVNLLHR------KGIAFITFKTNEAA 432
Query: 396 NLVIKRRNLKLRDRELRLSHAQQNCTPSKR 425
++ + R LR++ P K+
Sbjct: 433 EKALEYNETAYQGRNLRINITADRVKPEKQ 462
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 47/203 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIK--FGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
I+ G LP ++ ++ +KE + G ++ V + + RKG
Sbjct: 385 IYCGGLPFQITEEE-VKELFEGDCGPVERVNL---------LHRKGI------------- 421
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDAPLYDIKKT--- 338
A+I FK+ ++ E AL +N G ++R+ DR P ++ G D DI ++
Sbjct: 422 -AFITFKTNEAAEKALEYNETAYQGRNLRINITADRVKPEKQAGFGNDQ--SDIPQSGTE 478
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGK--GIAYVLFKTREA 394
V + NL ++ +E + +LF CG E +R + GK G ++ F + EA
Sbjct: 479 VCIRNLSYNTTEETMRELFSECG--------EVIRCVIPKFEENGKSMGRCFIGFTSEEA 530
Query: 395 ANLVIKRRNLKLRDRELRLSHAQ 417
A ++ N ++ R + + +A+
Sbjct: 531 AARAVEYDNTEIDGRTVSIQYAR 553
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++GEI+S+ +++ P N
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDP-----------------NTGRSRG 78
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 79 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 124
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ DEEI F ++ VE V + KG ++ F + + N ++K
Sbjct: 125 TEISDEEIKTFFGQFGNI---VE-VEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQT 180
Query: 406 LRDRELRLSHA 416
+ +E+ + A
Sbjct: 181 ISGKEVDVKKA 191
>gi|340723814|ref|XP_003400283.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus terrestris]
Length = 413
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL 315
++S P+++ +P+ Q + ++ F E+ + A+ NM + G IR+
Sbjct: 34 VQSGPVVNVHMPKDRVTQMHQ-------GYGFVEFMGEEDADYAIKIMNMIKLYGKPIRV 86
Query: 316 DRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRH 375
++A +K L D+ +F+GNL +V ++ +Y F + ++ +++R
Sbjct: 87 NKASAHQKNL--------DVGANIFIGNLDPEVDEKLLYDTFSAFGVI---LQTPKIMRD 135
Query: 376 PHMRVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELRLSHA 416
P KG A++ F + +A++ I+ N + L +R + +S+A
Sbjct: 136 PETGNSKGFAFINFASFDASDASIEAMNGQYLCNRPISVSYA 177
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|390595506|gb|EIN04911.1| hypothetical protein PUNSTDRAFT_55250 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 486
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 34/150 (22%)
Query: 314 RLDRA--CPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVR 371
R DR PPR+ L P Y T FVGNL FD+++ E+ F S ++V+
Sbjct: 58 RPDRGFGGPPREDLPLPSQPPY----TAFVGNLAFDLQEIELEGFFA-----PSKTKSVK 108
Query: 372 VIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPA 431
+I+ R KG Y+ F+T + I R L R +R+S A+
Sbjct: 109 IIKDRDDRP-KGFGYIEFETLDGLKDGISRSGTNLNGRTVRVSVAE-------------- 153
Query: 432 VNSPPKKFVLDSRTLGSGNRSNSKVAMSYQ 461
PPK+ R GSG + K A ++
Sbjct: 154 ---PPKE-----RGFGSGGFDDEKFASPWR 175
>gi|387594015|gb|EIJ89039.1| hypothetical protein NEQG_00858 [Nematocida parisii ERTm3]
gi|387595783|gb|EIJ93406.1| hypothetical protein NEPG_01748 [Nematocida parisii ERTm1]
Length = 512
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 40/210 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG++P+ + L + F K G+I ++ +IL+K+++ D +
Sbjct: 20 TIYVGDIPMATTESELFQIFSKVGQIYTI----------------SILRKEVSIVKDKCY 63
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
AY+ F E S A+ FN + G+ IR+ P K ++ + + + + + NLP
Sbjct: 64 AYVTFFDESSVPIAIETFNFYSLHGSQIRV----MPFNK----ESVVGNREGNIVIKNLP 115
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-L 404
+ ++ +Y F + S +V+++ ++ G+ Y+ +K + A + I+ N +
Sbjct: 116 KETDNQTLYDTFIVFGPILSC----KVVKN-NLSECTGVGYIQYKDPKVAEVAIQMINKI 170
Query: 405 KLRDRELRLSHAQQNCTPS-----KRKDVA 429
L ++L + C P+ KR++VA
Sbjct: 171 VLNGKKLCATQ----CIPNDKREKKRENVA 196
>gi|302693156|ref|XP_003036257.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune H4-8]
gi|300109953|gb|EFJ01355.1| hypothetical protein SCHCODRAFT_50059 [Schizophyllum commune H4-8]
Length = 329
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V + + ++ G P+++ +P+ + Q +
Sbjct: 14 TVYLGNLDERVTDAIVWELMLQAG----------PVVNVHLPKDRISMSHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F +E+ E A N + G IR+++A +K+L D+ +F+GNL
Sbjct: 57 GFCEFLTEEDAEYACKIMNQIKLWGKPIRVNKASSDKKQL--------DVGANLFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V + +Y F + ++ +V R P KG +V F EA++ I+ N +
Sbjct: 109 ENVDERLLYDTFSAFGMMATTA---KVARDPGTGTSKGYGFVSFTDFEASDAAIEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L ++ + + +A
Sbjct: 166 FLMNKAITVQYA 177
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 31/202 (15%)
Query: 216 EGFDDEGKL--LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
+GF E ++ T+FV N P + + + F ++GE IID + P
Sbjct: 893 DGFTIEVQIGTCSTLFVTNFPPEADENYIRGLFREYGE----------IIDVRFP----- 937
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
+ N Y+ FK+ ++ +A + +G + P +K + P+Y
Sbjct: 938 ---SLKYNTHRRFCYVQFKTAEAAHSATKLDGTTVGKGLTLTAKISDPSRK-QDRHGPIY 993
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ + + V N+ F + ++ +LF S V ++R P G KG YV+F
Sbjct: 994 E-GREIHVSNVDFKASERDVQELF-------SKYGTVELVRLPRKVDGGSKGFGYVVFSN 1045
Query: 392 REAANLVIKRRNLKLRDRELRL 413
+E A + + R R L +
Sbjct: 1046 KEEATAALAMDGQEYRSRTLHV 1067
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL V L EF K G ++ VR+ + D + KG
Sbjct: 142 TIYVGNLFFDVTAGDLKNEFSKCGPVEGVRL----LYDYRGVSKG--------------F 183
Query: 287 AYIVFKSEQSTEAALAFNMA-VIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F ++ E A+A + G H+ ++ A K D P +T+++GN+P
Sbjct: 184 GYVKFHDVETAEKAVALMHGQLFEGRHLAVNFARVELDKPMNHD-PTKPPTRTLYIGNIP 242
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D ++ +LF D+++ ++ VRV +G + F E+A + K
Sbjct: 243 FEMTDRDLNELF---KDVDNIID-VRVAVDRRTGRARGFVHADFTDIESARKAFTLLSTK 298
Query: 406 L-RDRELRLSHAQQN-----CTPSKRKD 427
R LR+ ++ N P KR D
Sbjct: 299 TPYGRPLRIDYSHSNIKIQPAGPPKRDD 326
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 51/206 (24%)
Query: 221 EGKLLRT-----IFVGNLPLK---VKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
EGK T +F GNL + KT I +F F + D + ++D +I
Sbjct: 283 EGKYTETSTNFNLFAGNLNFNKTAAELKTAITDF--FAKKD------LTVVDVRI----- 329
Query: 273 ILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL 332
A Y+ F+S + E AL + + + G+ ++L++A ++ K DA
Sbjct: 330 --------GATRKFGYVEFESAEDMEKALELSGSKVLGSEMKLEKA---KENKKDRDA-- 376
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFK 390
+T+FV NLP+ V EE+ ++F E ++E IR + G KGIAYV FK
Sbjct: 377 ----RTLFVKNLPYKVTQEELKEVF------EDAIE----IRLVCTKDGTPKGIAYVEFK 422
Query: 391 TREAANLVI-KRRNLKLRDRELRLSH 415
T + + +++ ++ R L L +
Sbjct: 423 TEADVDKALEEKQGTEIDGRALILDY 448
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 43/233 (18%)
Query: 214 KEEGFDDEGKLLRT--------IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDT 265
+E G DEG IFVGNLP V L + F + G+++ V + I D
Sbjct: 79 EEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAELFERAGDVEMVEV----IYDK 134
Query: 266 KIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRA-CPPRK 323
R ++ S+++ EAA FN I G +R++ PP++
Sbjct: 135 LTGRSRGF-------------GFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPPKR 181
Query: 324 KLKGEDAPLY---------DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
+ D Y D V+VGNL + V +++ LF + V +V+
Sbjct: 182 ENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFS----EQGKVVDAKVVY 237
Query: 375 HPHMRVGKGIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQQNCTPSKRK 426
+G +V + + + N I+ + + L R +R+S A+ P +R+
Sbjct: 238 DRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAE--ARPPRRQ 288
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 31/202 (15%)
Query: 216 EGFDDEGKL--LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
+GF E ++ T+FV N P + + + F ++GE IID + P
Sbjct: 894 DGFTIEVQIGTCSTLFVTNFPPEADENYIRGLFREYGE----------IIDVRFP----- 938
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
+ N Y+ FK+ ++ +A + +G + P +K + P+Y
Sbjct: 939 ---SLKYNTHRRFCYVQFKTAEAAHSATKLDGTTVGKGLTLTAKISDPSRK-QDRHGPIY 994
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ + + V N+ F + ++ +LF S V ++R P G KG YV+F
Sbjct: 995 E-GREIHVSNVDFKASERDVQELF-------SKYGTVELVRLPRKVDGGSKGFGYVVFSN 1046
Query: 392 REAANLVIKRRNLKLRDRELRL 413
+E A + + R R L +
Sbjct: 1047 KEEATAALAMDGQEYRSRTLHV 1068
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 28/193 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 911 TVFIGNVFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 952
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A NM + G + + A + +AP +T+++GNLP
Sbjct: 953 GYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 1008
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D ++ +LF D+++ V+ +RV +G A+ F + +A + K
Sbjct: 1009 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENK 1064
Query: 406 L-RDRELRLSHAQ 417
L R LRL +++
Sbjct: 1065 LPYGRRLRLDYSK 1077
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++G+I+S+ +++ P N
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDP-----------------NTGRSRG 145
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A + VI N+ ++D P + K + +FVG L
Sbjct: 146 FAFIVYKSADSIDKVVAVSEHVI--NNKKVD---PKKAKAR---------YGKIFVGGLT 191
Query: 346 FDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
++ DEEI F ++ VE + + + R KG ++ F + + N ++K
Sbjct: 192 SEISDEEIKTFFGQFGNI---VEVEMPFDKQKNQR--KGFCFITFDSEQVVNELLKTPKQ 246
Query: 405 KLRDRELRLSHA 416
+ +E+ + A
Sbjct: 247 TISGKEVDVKKA 258
>gi|296420222|ref|XP_002839674.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635868|emb|CAZ83865.1| unnamed protein product [Tuber melanosporum]
Length = 493
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 295 QSTEAALAFNMAVIGGNHI-----RLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVK 349
Q+ A+ N GGN R DR PPR+ + D P + T VGNL FDV
Sbjct: 26 QNRPGAVYGNRRDYGGNSSFGGGDREDR-YPPRQAIPPPDKPPF----TAHVGNLSFDVT 80
Query: 350 DEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE----AANL---VIKRR 402
+ ++ + F VE VR++R KG YV FKT+E A N+ V R
Sbjct: 81 EAQMSEFFSSCQ-----VENVRLVRDRMDDRPKGFGYVEFKTKEGLIAAVNMSGEVFCGR 135
Query: 403 NLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKK 438
+K+ E + R+ P + PP++
Sbjct: 136 GVKVSVAEPQKDRGDDRTQGEWRRSGPPPLADPPRR 171
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
F+GNLP ++ T +K+F + + +V + I D RK
Sbjct: 182 FFIGNLPWSAEEDT-VKQFFESQGVSAVYAVRL-ITDRDTGRKKGF-------------G 226
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRA----CPPRKKLKGEDAPLYD----IKKTV 339
YI S +A LA N A G +++D+A + K DAP V
Sbjct: 227 YIE-TSASDVDAVLALNGADFEGRELKVDKANERPANADRDTKPRDAPRQSGEAATDGNV 285
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
F+GNL F+ ++ I+ +V+AVR++ + +G Y F+ + AN I
Sbjct: 286 FLGNLSFNSTEDSIWAALEQF----GTVKAVRIVYDRETQRPRGFGYCEFEDADTANKAI 341
Query: 400 KRR-NLKLRDRELRLSHA 416
+ + R++R+ A
Sbjct: 342 AASGTVDVDGRQIRIDTA 359
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|346321757|gb|EGX91356.1| nucleolin protein Nsr1, putative [Cordyceps militaris CM01]
Length = 438
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 32/188 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F G+L V L + F F + R+ + D R
Sbjct: 182 TLFAGSLSWGVDDNALYEAFKSFSGLVHARV----VTDKNTGRSRGF------------- 224
Query: 287 AYIVFK-SEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGED----------APLYDI 335
Y+ F SE +T+A A + G + LD A + K +D L
Sbjct: 225 GYVDFADSESATKAYEAMQGQEVDGRALNLDYANAKPAESKPQDRAADRASRHGDTLSAE 284
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+T+FVGNLPFD + + + + F + + V ++R+ P KG YV F + + A
Sbjct: 285 SETLFVGNLPFDTEQDAVREFFGEV----AEVASIRLPTDPESGNLKGFGYVTFNSIDDA 340
Query: 396 NLVIKRRN 403
++ +N
Sbjct: 341 KTALEAKN 348
>gi|294884873|gb|ADF47445.1| TIA1-like protein, partial [Dugesia japonica]
Length = 430
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 39/203 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TI++ NLP + ++ L+ F FG S + N +++
Sbjct: 1 KTIYISNLPSPISEEDLLSIFGSFGACVSCEL-----------------------NLETL 37
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL------YDIKKTV 339
AYI F +E S E ALA N + N + ++ A L Y +
Sbjct: 38 TAYIEFDNESSAEKALAMNNTPMESNQMSVEIAYVDNVVQNVTSYTLASKKVDYSQSVQI 97
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVG + FD+ + + + F CG V +V+R + KG A+V F AN
Sbjct: 98 FVGGIGFDIDEAILKEGFAHCG------QVLDTKVVRSNDGQ-HKGFAFVSFSNESDANS 150
Query: 398 VI-KRRNLKLRDRELRLSHAQQN 419
I K N +R+++ + A +N
Sbjct: 151 AIQKMNNTMFHNRKIQCNWATKN 173
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 61/143 (42%), Gaps = 30/143 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L V L K F FGEI VR+ K P K N
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGEISEVRV-------VKDPAK----------NKSKGFG 131
Query: 288 YIVF-KSEQSTEAALAFNMAVIGGNHIRLDRAC----PPRKKLKGEDAPLYD-------- 334
++ F + E + +A + IGG ++ + A P + K L+D
Sbjct: 132 FVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQ 191
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF 357
+ TV+VGNLP DVKD E+ Q+F
Sbjct: 192 LNTTVYVGNLPPDVKDYELQQMF 214
>gi|17390870|gb|AAH18373.1| RNA binding motif protein 28 [Mus musculus]
Length = 575
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE--- 393
KTVF+ NL FD ++E + ++ DL+ VRV+ HP KG A+ F T+E
Sbjct: 150 KTVFIRNLSFDSEEEALGEVLQQFGDLKY----VRVVLHPDTEHSKGCAFAQFMTQEAAQ 205
Query: 394 ----AANLVIKRRNLKLRDRELRLSHA 416
AA+L + LKL R+L++ A
Sbjct: 206 KCLAAASLEAEGGGLKLDGRQLKVDLA 232
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
++VG +P + TL F + IR ++ K ++ QIN + A
Sbjct: 197 LYVGQIPSTTDEVTLCDFF-------NATIRH------ELQDKTPVVGVQINHEKN--FA 241
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC---PPRKKLKGEDAPLYDIKKTVFVGNL 344
+I F + Q A + + GN +++ R PP +++ G + D VFVG L
Sbjct: 242 FIEFHTSQQATACMVLDGISFQGNTLKIRRPNHYQPPEEQVPGLSTNVPDTPNKVFVGGL 301
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN- 403
P + D ++ +L +L A +++ KG A+ + +L + N
Sbjct: 302 PVYLTDNQVMELLTSFGEL----RAFNLVKDTATGANKGFAFCEYADPSVTDLACQGLNG 357
Query: 404 LKLRDRELRLSHA 416
++L D++L + A
Sbjct: 358 MELGDKKLIVQRA 370
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|302496478|ref|XP_003010240.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
gi|291173782|gb|EFE29600.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
Length = 1598
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 97/254 (38%), Gaps = 58/254 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFV N P + + + F +GEI VR S+ N
Sbjct: 1180 TIFVTNFPPTADENYIRELFHSYGEIAEVRFPSLKF------------------NTHRRF 1221
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F S S AA + +G + + P ++ A Y+ + ++V N+P+
Sbjct: 1222 CYVQFTSSSSAYAATELDKKDLGDGLELVVKISDPSQRQARSGA--YEEGREIYVCNIPY 1279
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR------------ 392
+ ++ +LF D+ES +R P G +G +V F T+
Sbjct: 1280 KTTEGDLVELFTAYGDVES-------VRIPTKVNGETRGFGFVTFATKLDRAVILTSDKD 1332
Query: 393 -EAANLVIKRRNLKLRDRELRLSHA-----QQNCTPSKRKDVAPAVN---------SPPK 437
A L + + K R+ +RLS QN S+ + +PA N SPP
Sbjct: 1333 QSTAALAMNEKTFKGRELNVRLSTNTGAKRHQNTIVSRSE--SPATNAQRNGTSTASPPP 1390
Query: 438 KFVLDSRTLGSGNR 451
+ D ++ G G+R
Sbjct: 1391 GSLPDGQSKGKGDR 1404
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KT+FVGNLPF V+ ++ F G + V VR R KG +V F T EAA+
Sbjct: 387 KTLFVGNLPFQVERADVEDFFKGAGE----VVDVRFALDQDQRF-KGFGHVEFATIEAAH 441
Query: 397 LVIKRRNLKLRDRELRLSHAQQ 418
+K L RE+RL A++
Sbjct: 442 EALKLNGQSLNGREVRLDLARE 463
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 59/217 (27%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T+FVGNLP +V++ + F GE+ VR A+ Q Q +
Sbjct: 387 KTLFVGNLPFQVERADVEDFFKGAGEVVDVRF--------------ALDQDQRFKG---- 428
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F + ++ AL N + G +RLD A + +GE AP P
Sbjct: 429 FGHVEFATIEAAHEALKLNGQSLNGREVRLDLA-----RERGERAPY-----------TP 472
Query: 346 FDVKDEEI---------------YQLFCGLNDLESSV--------EAVRVIRHPHMRVG- 381
+ KD + F G +++ +S+ E R+ G
Sbjct: 473 YSGKDNSFQKGGRSQTQKIFVRGFDKFLGEDEIRNSLGEHFKTCGEITRISLPTDYETGA 532
Query: 382 -KGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHAQ 417
KG+AYV F+ N ++ +L D+ L + A+
Sbjct: 533 IKGMAYVEFQDATGFNKALEFNGSQLGDQYLTVEEAK 569
>gi|405119657|gb|AFR94429.1| splicing factor 3b subunit 4 [Cryptococcus neoformans var. grubii
H99]
Length = 304
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL + LI E + +++ P+ + +P+ +I++ A
Sbjct: 14 TVYLGNLDERCTD-ALIWELM---------LQAGPVSNVFLPKD------RISQ-AHQGF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F SE E A+ N + G IR+++A +K++ D+ +FVGNL
Sbjct: 57 GFCEFMSEADAEYAVKIMNQIKLYGKPIRVNKASYDKKQV--------DVGANLFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+V ++ +Y F L E ++ R P + KG A++ + EAA+L I+ N
Sbjct: 109 PNVDEQTLYDTFSTFGTL---AEQPKIARDPTTGLSKGHAFIAYNDFEAADLAIENMN 163
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L KEF G + S R+ I +G + +
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARV---------INERGTDRSRG--------Y 184
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACP--------PRKKLKGEDAPLYDIKK 337
Y+ F+++ E A+ I G I D + R K G D P +
Sbjct: 185 GYVDFENKSYAEKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFG-DTP-SEPSD 242
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T+F+GNL F+ + I++LF V +VR+ HP KG YV F + E +
Sbjct: 243 TLFLGNLSFNADRDTIFELFA----KHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKK 298
Query: 398 VIKRRNLKLRD-RELRLSHA 416
++ + D R +RL ++
Sbjct: 299 ALESLQGEYIDNRPVRLDYS 318
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + T+ + F K GE+ SVRI + P +T+ P+
Sbjct: 243 TLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHP--ETEQPKG---------------F 285
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S + ++ AL + I +RLD + P
Sbjct: 286 GYVQFSSLEDSKKALESLQGEYIDNRPVRLDYSSP 320
>gi|321450936|gb|EFX62765.1| hypothetical protein DAPPUDRAFT_67708 [Daphnia pulex]
Length = 197
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
TV+V N PF + + +++Q+F +V V +++H R KG+A+++++T+E A+
Sbjct: 10 TVYVSNFPFSLTNNDLHQIFGQYG----TVIKVTIVKHRLTRKSKGVAFIVYRTQEEASN 65
Query: 398 VIKRRNLK-LRDRELRLSHAQQN 419
I++ N K + R L+ S A+ N
Sbjct: 66 CIQQTNQKEMFGRILKSSIAKDN 88
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + LI F G + S +I I E +
Sbjct: 7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R PH KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISNC----RIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 44/190 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDP---HTMKSKG--------------YA 139
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC----PPRK--------KLKGEDAPLYD 334
++ F + E A+ A N IG IR + + PPR+ ++ + +P
Sbjct: 140 FVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKXXXXXEVYNQSSP--- 196
Query: 335 IKKTVFVGNLPFDV-KDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
TV+ G P +V D+ +++ F ++ VRV + KG +++ F T+E
Sbjct: 197 TNTTVYCGGFPPNVISDDLMHKHFVQFG----PIQDVRVFK------DKGFSFIKFVTKE 246
Query: 394 AANLVIKRRN 403
AA I+ +
Sbjct: 247 AAAHAIEHTH 256
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL + L EF + S R+ + D + R
Sbjct: 168 TLWVGNLGWGIDDAILFAEFEECEGAKSARV----VTDRESGRSRGF------------- 210
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDI----K 336
Y+ F++ +Q+ +A A + ++ G +RLD A P+ K A D
Sbjct: 211 GYVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPES 270
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE-AA 395
T+FVGN+PF + + F + +SV ++R+ KG AYV F + E A
Sbjct: 271 DTLFVGNMPFTADESAVSDFFNSV----ASVASLRIPTDQESGRPKGFAYVTFNSIEDAK 326
Query: 396 NLVIKRRNLKLRDRELRLSHAQ 417
N + L+ R +RL +A+
Sbjct: 327 NAFDQLNGSDLQGRPVRLDYAK 348
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 32/202 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VGNL + L EF + S R+ + D + R
Sbjct: 168 TLWVGNLGWGIDDAILFAEFEECEGAKSARV----VTDRESGRSRGF------------- 210
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACP-----PRKKLKGEDAPLYDI----K 336
Y+ F++ +Q+ +A A + ++ G +RLD A P+ K A D
Sbjct: 211 GYVDFENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPES 270
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
T+FVGN+PF + + F + +SV ++R+ KG AYV F + E A
Sbjct: 271 DTLFVGNMPFTADESAVSDFFNSV----ASVASLRIPTDQESGRPKGFAYVTFNSIEDAK 326
Query: 397 LVIKRRN-LKLRDRELRLSHAQ 417
+ N L+ R +RL +A+
Sbjct: 327 NAFDQLNGSDLQGRPVRLDYAK 348
>gi|350633123|gb|EHA21489.1| hypothetical protein ASPNIDRAFT_125918 [Aspergillus niger ATCC
1015]
Length = 264
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 28/193 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 94 TVFIGNVFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 135
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A NM + G + + A + +AP +T+++GNLP
Sbjct: 136 GYVQFDSIDAAQRAVDALNMRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 191
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D ++ +LF D+++ V+ +RV +G A+ F + +A + K
Sbjct: 192 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEFVSTSSAKAAMAILENK 247
Query: 406 L-RDRELRLSHAQ 417
L R LRL +++
Sbjct: 248 LPYGRRLRLDYSK 260
>gi|18026763|gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
Length = 597
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 115/286 (40%), Gaps = 81/286 (28%)
Query: 169 RDDVEKDYVEKKYGVIA-----------------------KEEEG---KKVGVGEKRKKA 202
D VE D +E G K EEG +KV V E
Sbjct: 91 DDAVEVDELEGDEGTKEEQKPQKKKNKKKKKKRKVNKTPKKAEEGNVQEKVKVEEIEVNT 150
Query: 203 DNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI 262
DN+ ED +V K ++VG +P + + + F G I I+
Sbjct: 151 DNKEEDGVVPNK-------------LYVGGIPYQSTEDEIRSYFRSCGVI----IK---- 189
Query: 263 IDTKI-PRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDR---- 317
+D K+ P GA S A+I F +E + ALAF+ A +G ++ + +
Sbjct: 190 VDCKMRPEDGAF----------SGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKT 239
Query: 318 ACP--PRKKLKGEDAP-LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIR 374
P PR+K AP + D V++GNL +D + +I +LF + + +VR+ +
Sbjct: 240 TTPSIPRRKTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLF-----SDCVINSVRLGK 294
Query: 375 HPHMRVGKGIAYVLFK-------TREAANLVIKRRNLK----LRDR 409
+ KG A+V FK EA + VI R +K L+DR
Sbjct: 295 NKETGEFKGYAHVDFKDSVFCGDCAEAGSAVICGRPVKICCALKDR 340
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++G+I+S+ +++ P N
Sbjct: 40 RKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDP-----------------NTGRSRG 82
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A G+H+ ++ P KK K +FVG L
Sbjct: 83 FAFIVYKSADSIDKVVA------AGDHVINNKKVDP-KKAKARHG-------KIFVGGLT 128
Query: 346 FDVKDEEI---YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
++ D+EI + F + D+E + + R KG ++ F + + N ++K
Sbjct: 129 TEISDDEIKTFFGQFGNIVDVEMPFDKQKNQR-------KGFCFITFDSEQVVNELLKTP 181
Query: 403 NLKLRDRELRLSHA 416
+ +E+ + A
Sbjct: 182 KQTISGKEVDVKKA 195
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 327 GEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
G+ AP+ D + +FVG L ++ D+E+ + F D+ES + V P+ +G A+
Sbjct: 30 GDSAPVRDDDRKLFVGGLSWETSDKELKEHFGQYGDIES----INVKTDPNTGRSRGFAF 85
Query: 387 VLFKTREAANLVI 399
+++K+ ++ + V+
Sbjct: 86 IVYKSADSIDKVV 98
>gi|327272896|ref|XP_003221220.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Anolis
carolinensis]
Length = 311
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 34/198 (17%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ T R
Sbjct: 38 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPV--TGRSRG--------- 82
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S E L + G I RA K LKG++ P K V
Sbjct: 83 ------FGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 127
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVG L D +E+I + F G ++E+ + + +G ++ + E ++
Sbjct: 128 FVGGLSPDTSEEQIKEYFGGFGEIEN----IELPMDTKTNERRGFCFITYSDEEPVKKLL 183
Query: 400 KRRNLKLRDRELRLSHAQ 417
+ R ++ + + AQ
Sbjct: 184 ESRYHQIGSGKCEIKVAQ 201
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 36/189 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG LP +V + + F + GEI +V++ S N V A
Sbjct: 9 IFVGQLPSRVNEDEIRTYFEECGEITNVKVLS--------------------GNPQRVAA 48
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNH-IRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
++ F +E AA+AFN GN +R++ A K GE P T+ N+ F
Sbjct: 49 FVTFATEDGKNAAIAFNGKDFNGNGPLRINAA--NSKPSDGEGEP-----TTIVARNIAF 101
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRNL 404
V + + + F G + RV + G KG A+V F + EA + I
Sbjct: 102 SVDETLVKEFFQGCGKI------TRVSLPTYEDSGRLKGFAFVSFDSEEAVDKAIALAGT 155
Query: 405 KLRDRELRL 413
RE+++
Sbjct: 156 MFEGREIQV 164
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 36/202 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+DEGK+ FVG L KK L F KFGE+ ++ PI
Sbjct: 69 EDEGKM----FVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPIT--------------- 109
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S E + G I P R K P+ K
Sbjct: 110 --GRSRGFGFVLFKESESVEKVTDQKEHKLNGKVID-----PKRAKAMKTKEPV----KK 158
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+FVG L D +E+I + F G + VE++ + +G ++ FK EA +
Sbjct: 159 IFVGGLSPDTPEEKIREYFGGFGE----VESIELPMDNKTNKRRGFCFITFKDEEAVKKI 214
Query: 399 IKRR--NLKLRDRELRLSHAQQ 418
++++ N+ L E++++ +++
Sbjct: 215 MEKKYHNVGLSKCEIKVAMSKE 236
>gi|358054177|dbj|GAA99713.1| hypothetical protein E5Q_06416 [Mixia osmundae IAM 14324]
Length = 565
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 82/266 (30%)
Query: 226 RTIFVGNLPL-----KVKKKTLIKEFIK--------FGEIDSVRIRSVPI---------- 262
RT+F+GN+ L K K L++ +S+R RS+P+
Sbjct: 168 RTVFIGNVVLAAASSKSTSKALVRHLFSTLPEQVQAVARCESIRYRSLPLAAPVTQPKSS 227
Query: 263 --------------------------IDTKIPRKGAILQKQINENADSVHAYIVFK---- 292
+ RK A ++ +++ + + +AY V +
Sbjct: 228 QSHAKARAEQWKQHANGASQEPAQEYLTPAQQRKVAFIKHELHPSGQNCNAYAVLQLTSP 287
Query: 293 -------SEQSTEAALAFNMAVIGGNHIRLD-------RACPPRKKLKGEDAPLYD-IKK 337
++ +T A + N V +R+D A P K D+ D +++
Sbjct: 288 AADLETSADLATLLATSANATVFEERTLRVDLVKSASDAASSPGK----TDSHSADHLRR 343
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESS--------VEAVRVIRHPHMRVGKGIAYVLF 389
T +VGNL F +E I ++F L E VE+VRV+R +GKG AYVL
Sbjct: 344 TCYVGNLDFAQDEEGIRKVFEDLLRAERGAPPAGKPYVESVRVVRDRDTGLGKGFAYVLL 403
Query: 390 KTREAAN--LVIKRRNLKLRDRELRL 413
+ + I+ +K+ R++RL
Sbjct: 404 HDEDCVDEMFAIEASKVKVSKRKVRL 429
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 43/207 (20%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+TIFVG L V L EF + GE+ S R+ ID N
Sbjct: 343 KTIFVGRLSWNVDDDQLASEFAECGEVVSARVN----IDR-------------NTGKSRG 385
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGED----------APLYD 334
++ F S + A+ N I G + +DRA K + E+ AP
Sbjct: 386 FGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDSTSAP--- 442
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKT 391
+FVGNL +D ++ +++ F +++S +R P R KG YV F
Sbjct: 443 -SSVLFVGNLSWDATEDAVWEAFGEHGEVKS-------VRLPTDRESGRPKGFGYVEFVD 494
Query: 392 REAANLVIKR-RNLKLRDRELRLSHAQ 417
+AA + ++ R +RL ++Q
Sbjct: 495 VDAAKAAFEALSGTEIGGRSIRLDYSQ 521
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 58 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 96
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 97 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 145
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 146 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 201
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 202 VLEKKFHTVSGSKCEIKVAQ 221
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F ++GEI+S+ +++ P N
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDP-----------------NTGRSRG 101
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF + A A + V G HI ++ P KK K +FVG L
Sbjct: 102 FAFIVFNN------AEAIDKVVAAGEHIINNKKVDP-KKAKARHG-------KIFVGGLT 147
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKTREAANLVIKRR 402
++ D++I F S + + P + KG ++ F++ + N ++K
Sbjct: 148 NELSDDDIKNFF-------SQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 200
Query: 403 NLKLRDRELRLSHA 416
++D+E+ + A
Sbjct: 201 KQTIKDKEVDVKKA 214
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F ++GEI+S+ +++ P N
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDP-----------------NTGRSRG 101
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF + A A + V G HI ++ P KK K +FVG L
Sbjct: 102 FAFIVFNN------AEAIDKVVAAGEHIINNKKVDP-KKAKARHG-------KIFVGGLT 147
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG---KGIAYVLFKTREAANLVIKRR 402
++ D++I F S + + P + KG ++ F++ + N ++K
Sbjct: 148 NELSDDDIKNFF-------SQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 200
Query: 403 NLKLRDRELRLSHA 416
++D+E+ + A
Sbjct: 201 KQTIKDKEVDVKKA 214
>gi|296193572|ref|XP_002744572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Callithrix jacchus]
Length = 256
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 33/172 (19%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+ +E+I + F + +EA+ + HP + +G ++ FK R ++
Sbjct: 93 EATEEKIREYFGDFGE----IEAIELPMHPKLNKRRGFVFITFKERSVKKVL 140
>gi|148235805|ref|NP_001079609.1| heterogeneous nuclear ribonucleoprotein D-like-A [Xenopus laevis]
gi|82241529|sp|Q7ZX83.1|HNDLA_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-A;
Short=hnRNP D-like A; Short=hnRNP DL-A
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis]
Length = 293
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 34/198 (17%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
DEGK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 24 DEGKM----FIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVT---------------- 63
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L N + G I RA K LKG++ P K V
Sbjct: 64 -GRSRGFGFVLFKDAVSVDKVLETNEHKLDGKLIDPKRA----KALKGKEPP-----KKV 113
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVG L + +E+I Q F G ++E+ + + +G +V + E ++
Sbjct: 114 FVGGLSPETTEEQIKQYFGGFGEIEN----IELPIDTKTNERRGFCFVTYTGEEPVKKLL 169
Query: 400 KRRNLKLRDRELRLSHAQ 417
+ R ++ + + AQ
Sbjct: 170 ESRFHQIGTGKCEIKAAQ 187
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 38/234 (16%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+RT+++G+L + + L F GE+ SV++ I KQ +++
Sbjct: 65 VRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKV---------------IRNKQTSQSEG- 108
Query: 285 VHAYIVFKSEQSTEAAL-AFNMAVI--GGNHIRLDRAC-PPRKKLKGEDAPLYDIKKTVF 340
+ +I F S E L +N A++ GG RL+ A ++ + +D+P Y T+F
Sbjct: 109 -YGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDY----TIF 163
Query: 341 VGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR-EAANLVI 399
VG+L DV D + + F +SV+ +V+ KG +V F E +
Sbjct: 164 VGDLAADVTDYLLQETF---RARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMT 220
Query: 400 KRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSN 453
+ + + R +R+ P+ K P S PK +S+ GS N ++
Sbjct: 221 EMQGVLCSTRPMRIG-------PASNK--TPTTQSQPKASYQNSQPQGSQNEND 265
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 28/170 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L V + L EF G++ R+ I +G + +
Sbjct: 179 TIFVGRLSWSVDDEWLKNEFEHIGDVIGARV---------IYERGTDRSRG--------Y 221
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DI----KKTV 339
Y+ F S+ + E A+ + I G I D + P G+ A + D+ T+
Sbjct: 222 GYVDFSSKSAAERAVKEMHGKQIDGREINCDMSTSKPAGGNGGDRAKKFGDVPSQPSDTL 281
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+GNL F+ ++IY+LF + +VR+ HP KG YV +
Sbjct: 282 FLGNLSFNADRDQIYELFS----KHGEIISVRLPTHPETEQPKGFGYVQY 327
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 77/208 (37%), Gaps = 43/208 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L +EF FGE+ VRI + D R
Sbjct: 288 LFVGNLSWNVDEEWLRQEFETFGELSGVRI----VTDRDSGRSRGF-------------G 330
Query: 288 YIVFKSEQSTEAALAFNMAV-IGGNHIRL-----------------DRACPPRKKLKGED 329
Y+ + S A I G I L DRA + +
Sbjct: 331 YVEYVSAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARNFGDQA 390
Query: 330 APLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
+P D T+FVGN+PF ++ + +LF ++ +R+ P KG YV F
Sbjct: 391 SPESD---TLFVGNIPFSANEDSVSELFG----QSGTIVGIRLPTDPESGRPKGFGYVQF 443
Query: 390 KTREAANLVIKRRN-LKLRDRELRLSHA 416
+ + A N +L R +RL +
Sbjct: 444 SSVDEARQAFNDLNGAELNGRPVRLDFS 471
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 194 GVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEID 253
G E+ KK E+ED V +K++ +G+ TIFVG L V + L EF G +
Sbjct: 139 GSKEESKKRSAESEDDAVAKKQK---TDGQPA-TIFVGRLSWSVDDEWLKTEFDHIGGVV 194
Query: 254 SVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNH 312
R+ I ++ +++ + Y+ F+ E A+ + I G
Sbjct: 195 GARV---------------IYERGTDKSRG--YGYVDFEDVSYAEKAVKEMHGKEIDGRA 237
Query: 313 IRLDR-----ACPPR--KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
I D A PR + K D P T+F+GNL F+ + +++LF
Sbjct: 238 INCDMSTSKPASAPREDRAKKYGDTPS-QPSDTLFLGNLSFNADRDALFELFS----KHG 292
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
+V +VR+ HP KG YV + + E A +
Sbjct: 293 NVISVRIPTHPESNQPKGFGYVQYGSVEEAQAAL 326
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ LI F G + + +I I E +
Sbjct: 7 KTLYVGNLDSSVSEELLIALFGTMGAVKNCKI--------------------IREPGNDP 46
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A+I + + Q+ AL A N + I+++ A P + K + + + I FVG+L
Sbjct: 47 YAFIEYSNYQAASTALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHI----FVGDL 102
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ E + + F ++ + R++R P KG A+V F K EA N +
Sbjct: 103 SPEIETETLREAFAPFGEISN----CRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNG 158
Query: 404 LKLRDRELRLSHAQQNCTPSK 424
+ R +R + + + P +
Sbjct: 159 QWIGSRSIRTNWSTRKLPPPR 179
>gi|20072578|gb|AAH27123.1| RNA binding motif protein 28 [Mus musculus]
Length = 500
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE--- 393
KTVF+ NL FD ++E + ++ DL+ VRV+ HP KG A+ F T+E
Sbjct: 75 KTVFIRNLSFDSEEEALGEVLQQFGDLKY----VRVVLHPDTEHSKGCAFAQFMTQEAAQ 130
Query: 394 ----AANLVIKRRNLKLRDRELRLSHA 416
AA+L + LKL R+L++ A
Sbjct: 131 KCLAAASLEAEGGGLKLDGRQLKVDLA 157
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F ++G+I+S+ +++ P N
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDP-----------------NTGRSRG 145
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+KS S + +A + VI N+ ++D P + K + +FVG L
Sbjct: 146 FAFIVYKSADSIDKVVAVSEHVI--NNKKVD---PKKAKAR---------YGKIFVGGLT 191
Query: 346 FDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
++ DEEI F ++ VE + + + R KG ++ F + + N ++K
Sbjct: 192 SEISDEEIKTFFGQFGNI---VEVEMPFDKQKNQR--KGFCFITFDSEQVVNELLKTPKQ 246
Query: 405 KLRDRELRLSHA 416
+ +E+ + A
Sbjct: 247 TISGKEVDVKKA 258
>gi|148681845|gb|EDL13792.1| RNA binding motif protein 28, isoform CRA_a [Mus musculus]
Length = 500
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE--- 393
KTVF+ NL FD ++E + ++ DL+ VRV+ HP KG A+ F T+E
Sbjct: 75 KTVFIRNLSFDSEEEALGEVLQQFGDLKY----VRVVLHPDTEHSKGCAFAQFMTQEAAQ 130
Query: 394 ----AANLVIKRRNLKLRDRELRLSHA 416
AA+L + LKL R+L++ A
Sbjct: 131 KCLAAASLEAEGGGLKLDGRQLKVDLA 157
>gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio]
Length = 643
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 15/112 (13%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ + AL N + G ++LD+A + K +D+ +T+FV NLP
Sbjct: 262 FGYVDFASEEELQKALGLNGKKLMGQPVKLDKA---KSKENSQDSKKERDSRTLFVKNLP 318
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAA 395
+ V EE+ ++F + +V+ IR P G +GIAY+ FK+ A
Sbjct: 319 YSVTQEELKEIF------DQAVD----IRIPMGNSGSSRGIAYLEFKSEAIA 360
>gi|74142527|dbj|BAE33848.1| unnamed protein product [Mus musculus]
gi|148681846|gb|EDL13793.1| RNA binding motif protein 28, isoform CRA_b [Mus musculus]
Length = 750
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE--- 393
KTVF+ NL FD ++E + ++ DL+ VRV+ HP KG A+ F T+E
Sbjct: 325 KTVFIRNLSFDSEEEALGEVLQQFGDLKY----VRVVLHPDTEHSKGCAFAQFMTQEAAQ 380
Query: 394 ----AANLVIKRRNLKLRDRELRLSHA 416
AA+L + LKL R+L++ A
Sbjct: 381 KCLAAASLEAEGGGLKLDGRQLKVDLA 407
>gi|353243433|emb|CCA74974.1| related to RNA-binding protein rnp24 [Piriformospora indica DSM
11827]
Length = 390
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 42/229 (18%)
Query: 221 EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINE 280
E + ++VGNL K +L KEF + +RI +P + G + N+
Sbjct: 61 ENRSAHCVWVGNLSFKTTPASL-KEFFTDEKEAIIRIH-MPTKALHGTKPGQKTARVDNK 118
Query: 281 NADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKK--LKGEDAPLYD 334
AY+ F + + ++A+A + ++ G + + D A P K K APL
Sbjct: 119 G----FAYVDFATPGAKDSAIARSEGILDGRRLLIKDGSDFAGRPEKDGVSKASSAPLTG 174
Query: 335 IKKT---------------VFVGNLPFDVKDEEIYQLFCGLN-DLESSVEAV--RVIRHP 376
+ KT +F+GNL F+ K+EEI LF ++ L+ E++ R++R
Sbjct: 175 MTKTARKILSQQKNEACPTLFIGNLSFETKEEEIAALFGRVHPKLKKEGESIEDRLLR-- 232
Query: 377 HMRVG--------KGIAYVLFKTRE-AANLVIKRRNLKLRDRELRLSHA 416
+R+G KG A+V FKT + A + ++ N L R L + +A
Sbjct: 233 -VRMGTFEDSGKCKGFAFVDFKTIQFATDALVNPHNHSLNGRALVVEYA 280
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRI----VTDRESGRSRGFGYVEFVNVEDAVKA 295
Query: 288 YIVFKSEQ--STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ K + + L + A GN +RA K + +P D T+F+GN+
Sbjct: 296 HGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKSFGDQTSPESD---TLFIGNIS 352
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN-L 404
F + + +LF +++ +R+ P KG YV F + + A ++ N
Sbjct: 353 FSADENMVQELFSKYG----TIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAENGA 408
Query: 405 KLRDRELRL 413
L R +RL
Sbjct: 409 DLGGRSIRL 417
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ + + + F K+G I +R+ + P D+ P+
Sbjct: 345 TLFIGNISFSADENMVQELFSKYGTIQGIRLPTDP--DSGRPKG---------------F 387
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S AAL A N A +GG IRLD + P
Sbjct: 388 GYVQFSSVDEARAALEAENGADLGGRSIRLDFSTP 422
>gi|241953799|ref|XP_002419621.1| RNA-binding protein, putative; nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223642961|emb|CAX43217.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 393
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 35/206 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGNL K+ LI+ + +I I IP+KG ++ A
Sbjct: 101 IWVGNLSFDTTKEDLIRFIVGKTTTSDPKITEDDITRVNIPKKGNQIKG---------FA 151
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKK--------LKGEDAPLYD 334
Y+ S E + + +++ G + + A P + K + + P
Sbjct: 152 YVDVPSSSHVETIVGLSESILNGRKLLIKDANSFEGRPEQSKSDTAHNGGINSSNPP--- 208
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ +FVGNL FD ++ + + F CG + +R+ KG A++ FK
Sbjct: 209 -SRILFVGNLSFDTTEDLLEEHFKHCG------EIVKIRMATFQDTGKCKGFAFIDFKDE 261
Query: 393 EAANLVIKRRNLK-LRDRELRLSHAQ 417
E A +K + K L +R+LR+ + +
Sbjct: 262 EGATTALKSKLTKMLINRKLRMEYGE 287
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ + AL N + G ++LD+A + K +D+ +T+FV NLP
Sbjct: 314 FGYVDFASEEEMQKALGLNGKKLMGQPVKLDKA---KSKEDSQDSKKERDARTLFVKNLP 370
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAA 395
+ + EE+ ++F E IR P G +GIAY+ FK+ A
Sbjct: 371 YSITQEELQEVF----------EQATDIRIPMGSNGSSRGIAYLEFKSEAIA 412
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 14/192 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F GNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 240 LFAGNLSWNVDEEWLRSEFEEFGELVGTRI----VTDRESGRSRGFGYVEFANVEDAVKA 295
Query: 288 YIVFKSEQ--STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ K + + L F A GN +RA K + +P D T+F+GN+
Sbjct: 296 HAAKKDVELDGRKLNLDFANARANGNANPRERADNRAKSFGDQTSPESD---TLFIGNIS 352
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK-RRNL 404
F + + +LF S++ +R+ P KG YV F + + A ++
Sbjct: 353 FSADESMVQELFSKYG----SIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAMEAEHGA 408
Query: 405 KLRDRELRLSHA 416
L R +RL ++
Sbjct: 409 DLGGRSIRLDYS 420
>gi|166235127|ref|NP_598686.2| RNA-binding protein 28 [Mus musculus]
gi|341942269|sp|Q8CGC6.4|RBM28_MOUSE RecName: Full=RNA-binding protein 28; AltName: Full=RNA-binding
motif protein 28
Length = 750
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE--- 393
KTVF+ NL FD ++E + ++ DL+ VRV+ HP KG A+ F T+E
Sbjct: 325 KTVFIRNLSFDSEEEALGEVLQQFGDLKY----VRVVLHPDTEHSKGCAFAQFMTQEAAQ 380
Query: 394 ----AANLVIKRRNLKLRDRELRLSHA 416
AA+L + LKL R+L++ A
Sbjct: 381 KCLAAASLEAEGGGLKLDGRQLKVDLA 407
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG+L V L + F +F + S R+ I D + R
Sbjct: 227 TLFVGSLAWAVNDDILYQAFSEFPNLTSARV----ITDREGGRSRGF------------- 269
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDA---------PLYD 334
Y+ F +S +AAL A N + G ++ +D + P R G+ A L
Sbjct: 270 GYVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSP 329
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
T+FVGN+ F++ + ++ F + + S VR+ P KG YV F + +
Sbjct: 330 ESDTLFVGNISFEMDQDTVHAFFATVAEPTS----VRLPTDPESGNLKGFGYVSFSSIDD 385
Query: 395 ANLVIKRRNLKL-----RDRELRLSHAQQ 418
A + N + R +RL +A Q
Sbjct: 386 AKKALSELNGQYLGEGSSGRAVRLDYAGQ 414
>gi|146323064|ref|XP_755976.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|129558598|gb|EAL93938.2| translation initiation factor 4B [Aspergillus fumigatus Af293]
gi|159130031|gb|EDP55145.1| translation initiation factor 4B [Aspergillus fumigatus A1163]
Length = 494
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T VGNL F+ +I LF G V VR++ R KG YV F+T +
Sbjct: 72 TAHVGNLSFEATSADINDLFAGCG-----VTNVRIVEDKLTRSPKGFGYVEFETVDGLRR 126
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKRKDV----------APAVNSPPKKFVLDSRTLG 447
+ L+ R +R+S A+ P K +DV PA PP++ V D T G
Sbjct: 127 ALDLSGTTLQGRAIRVSIAE----PPKERDVKELDWTRKGPLPAPEQPPRR-VPDRSTFG 181
>gi|327289491|ref|XP_003229458.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Anolis carolinensis]
Length = 905
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 227 TIFVGNLPLKVKKK--TLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
T+FV NL + + TL F GE+ VR PI K +G
Sbjct: 653 TVFVSNLSYSLAEPGPTLRALFSACGEVAEVR----PIFSNKGSFRG------------- 695
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI---KKTVFV 341
+ Y+ FK E + AL + + G + C + K G Y K +F+
Sbjct: 696 -YGYVEFKEETAAREALKMDRQDLNGR-LMFVSPCVDKTKQPGFKVFKYSTALEKHKLFI 753
Query: 342 GNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR-EAANLVIK 400
LPF EE+ +L C + +V+ VR++ + R KG+AYV F+ +A+ V+K
Sbjct: 754 AGLPFSYTKEELEEL-CKAH---GTVKEVRLVTNRAGR-SKGMAYVEFENEAQASQAVLK 808
Query: 401 RRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSY 460
L + D +++ A N K+ + A PP++ + G+ + +++AM
Sbjct: 809 MDGLAVNDYVIKV--AISNPPARKQPEAAERAPQPPRQ------SYGARGKGRTQLAMVP 860
Query: 461 QGLQ 464
+ LQ
Sbjct: 861 RALQ 864
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 40/244 (16%)
Query: 186 KEEEGKKVGVGEKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKE 245
K+ + ++V E KK+ E E+ ++EG T+FVG L + L KE
Sbjct: 223 KKRKNEEVVADETSKKSKTEAEETAAPTSPAVAEEEGA---TLFVGRLSWNIDDDWLKKE 279
Query: 246 FIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALA-FN 304
F G++ R+ I+++ ++ + Y+ FK++ + E ALA
Sbjct: 280 FEHLGDVIGARV---------------IMERATGKSRG--YGYVDFKTKAAAEKALAEMQ 322
Query: 305 MAVIGGNHIRLDRAC--PPRKKLKGED---------APLYDIKKTVFVGNLPFDVKDEEI 353
I G I LD + P K D +P D T+F+GNL F+ + +
Sbjct: 323 GKEIDGRPINLDMSTGKPHASKANAGDRARQFGDSQSPPSD---TLFIGNLSFNANRDSL 379
Query: 354 YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELR 412
+++F +V + RV HP + KG YV F + + A ++ N + + +R R
Sbjct: 380 FEIFGEYG----TVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYIENRPCR 435
Query: 413 LSHA 416
L +
Sbjct: 436 LDFS 439
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + +L + F ++G + S R+ + P DT+ P+
Sbjct: 364 TLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHP--DTQQPKG---------------F 406
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ F S +AAL A N I RLD + P
Sbjct: 407 GYVQFSSVDEAKAALEALNGEYIENRPCRLDFSTP 441
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA+ E K E D+ L F+GNL + ++ L +EF FGE+ VRI
Sbjct: 200 KKRKAEEEPATSAKKSKTESADNSSNL----FIGNLSWNIDEEWLRREFESFGELSGVRI 255
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRLD 316
+ +++ + Y+ + S +AA + G I LD
Sbjct: 256 ---------------MTERETGRSRG--FGYVEYADAASAKAAYEAKKDTELDGRTINLD 298
Query: 317 RACP-------PRKKLKGEDAPLYDI----KKTVFVGNLPFDVKDEEIYQLFCGLNDLES 365
A P PR+K + D T+F+GNL F V + + ++F + +
Sbjct: 299 YAKPRDANAQAPREKAQTRARSFGDQTSPESNTLFLGNLVFGVDENAVREVF----ESQG 354
Query: 366 SVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
+++ +R+ P KG YV F + + A +
Sbjct: 355 TIQGIRLPTDPETGRPKGYGYVEFSSVDEARQAL 388
>gi|302414816|ref|XP_003005240.1| gar2 [Verticillium albo-atrum VaMs.102]
gi|261356309|gb|EEY18737.1| gar2 [Verticillium albo-atrum VaMs.102]
Length = 437
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG+L V L + F +F + S R+ I D + R
Sbjct: 178 TLFVGSLAWAVNDDILYQAFSEFPNLTSARV----ITDREGGRSRGF------------- 220
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDA---------PLYD 334
Y+ F +S +AAL A N + G ++ +D + P R G+ A L
Sbjct: 221 GYVDFSDAESAKAALEAKNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSP 280
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
T+FVGN+ F++ + ++ F + + S VR+ P KG YV F + +
Sbjct: 281 ESDTLFVGNISFEMDQDTVHAFFATVAEPTS----VRLPTDPESGNLKGFGYVSFSSIDD 336
Query: 395 ANLVIKRRNLKL-----RDRELRLSHAQQ 418
A + N + R +RL +A Q
Sbjct: 337 AKKALSELNGQYLGEGSSGRAVRLDYAGQ 365
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 39/198 (19%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
DDE R +FVG L + +K L + F ++GEI+S+ +++ P
Sbjct: 65 DDE----RKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
N A+IV+K+ S + +A G H+ ++ P K+ K
Sbjct: 104 NTGRSRGFAFIVYKASDSIDKVVA------AGEHVLNNKKVDP-KRAKARPG-------K 149
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+FVG L D+ DEEI F ++ V + KG ++ +++ + N +
Sbjct: 150 IFVGGLTSDISDEEIKTFFGQF----GTIVEVELPFDKQKNQRKGFCFITYESVQVVNEL 205
Query: 399 IKRRNLKLRDRELRLSHA 416
+K + +E+ + A
Sbjct: 206 LKTPKQTIAGKEVDVKKA 223
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G L +++VG+L V + L ++F G I S+R+ + I
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRV-----------------CRDIATR 49
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL---DRACPPRKKLKGEDAPLYDIKK 337
+AYI F+ E AL N VI G IR+ R RK G
Sbjct: 50 RSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------- 99
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
VF+ NL + ++ +Y F ++ S +V+ H +G +V F+T+EAAN
Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILS----CKVVCDEHG--SRGYGFVHFETQEAANR 153
Query: 398 VIKRRN-LKLRDRELRLSH 415
I+ N + L DR++ + H
Sbjct: 154 AIQTMNGMLLNDRKVFVGH 172
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 28/193 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GN+ V ++ L K K+G ++ V V ++D + KG +
Sbjct: 884 TVFIGNIFYDVTREDLKKAMEKYGVVEKV----VLVLDNRGISKG--------------Y 925
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ A N+ + G + + A + +AP +T+++GNLP
Sbjct: 926 GYVQFDSIDAAQRAVDALNLRLFEGRRVTVQFAQNNVYHRRQLNAP----TRTLYIGNLP 981
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
F++ D ++ +LF D+++ V+ +RV +G A+ F + +A + K
Sbjct: 982 FEMTDRDLNELF---KDVQNVVD-IRVAVDRRTGQARGFAHAEFVSTSSAKAAMAVLENK 1037
Query: 406 L-RDRELRLSHAQ 417
L R LRL +++
Sbjct: 1038 LPYGRRLRLDYSK 1050
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L + F +GEI+S+ +++ P N
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDP-----------------NTGRSRG 84
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVFK+ S + +A G+H ++ P KK K +FVG L
Sbjct: 85 FAFIVFKAPDSIDKVMA------AGDHTINNKKVDP-KKAKARHG-------KIFVGGLS 130
Query: 346 FDVKDEEIYQLFCGLNDL---ESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
++ D+EI F ++ E + + R KG ++ F++ + N ++K
Sbjct: 131 SEISDDEIKNFFSNFGNIIEVEMPFDKTKNQR-------KGFCFITFESEQVVNELLKTP 183
Query: 403 NLKLRDRELRLSHA 416
+ +E+ + A
Sbjct: 184 KQTIAGKEVDVKRA 197
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ +D + R
Sbjct: 67 GEEDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVTDCTIK----MDQQTGRSRGF--- 115
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK 336
+I+FK S + L + G I RA +K +I
Sbjct: 116 ----------GFILFKDAASVDKVLEQKEHRLDGRQIDPKRAMAMKK----------EIV 155
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
K +FVG L D+ EEI + F ++E+ + + + P +G ++ +K +
Sbjct: 156 KKIFVGGLKPDLSKEEIEEYFGAFGEIET----IELPQDPKTEKRRGFVFITYKEEPSVK 211
Query: 397 LVIKRR 402
V++++
Sbjct: 212 KVLEKK 217
>gi|444726902|gb|ELW67417.1| RNA-binding protein 28 [Tupaia chinensis]
Length = 733
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L +L+ VR++ HP KG A+ F T+EAA
Sbjct: 334 KTVFIRNLSFDSEEEDLGELLQQFGNLKY----VRIVLHPDTEHSKGCAFAQFTTQEAAQ 389
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 390 KCLTAASPESEGGGLKLDGRQLKVDLA 416
>gi|83774819|dbj|BAE64942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1037
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 31/202 (15%)
Query: 216 EGFDDEGKL--LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
+GF E ++ T+FV N P + + + F ++GE IID + P
Sbjct: 641 DGFTIEVQIGTCSTLFVTNFPPEADENYIRGLFREYGE----------IIDVRFP----- 685
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
+ N Y+ FK+ ++ +A + +G + P +K + P+Y
Sbjct: 686 ---SLKYNTHRRFCYVQFKTAEAAHSATKLDGTTVGKGLTLTAKISDPSRK-QDRHGPIY 741
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ + + V N+ F + ++ +LF S V ++R P G KG YV+F
Sbjct: 742 E-GREIHVSNVDFKASERDVQELF-------SKYGTVELVRLPRKVDGGSKGFGYVVFSN 793
Query: 392 REAANLVIKRRNLKLRDRELRL 413
+E A + + R R L +
Sbjct: 794 KEEATAALAMDGQEYRSRTLHV 815
>gi|17538232|ref|NP_502136.1| Protein B0035.12 [Caenorhabditis elegans]
gi|3873696|emb|CAA97405.1| Protein B0035.12 [Caenorhabditis elegans]
Length = 836
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 33/193 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RTIFV NL + D +R + + RK N+D V
Sbjct: 593 RTIFVSNLDFTTTE-------------DEIRQAIEGVASIRFARKA---------NSDLV 630
Query: 286 H---AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
H AY+V +++Q + AL + + G + + A P K++ + + + K VFV
Sbjct: 631 HRGFAYVVMENDQKAQQALLKDRVPVKGRPMFIS-ANDPEKRVGFKFSTTLE-KSKVFVR 688
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN-LVIKR 401
N+ F D+E+ LF +V +VR + H + KGIA+V F T +A V
Sbjct: 689 NVHFQATDDELKALFSKF----GTVTSVRRVTHKDGK-PKGIAFVDFDTEASAQKCVASG 743
Query: 402 RNLKLRDRELRLS 414
L LR+REL ++
Sbjct: 744 DKLMLRERELEVA 756
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 71 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 109
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 110 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 158
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 159 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 214
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 215 VLEKKFHTVSGSKCEIKVAQ 234
>gi|26252146|gb|AAH40811.1| Rbm28 protein [Mus musculus]
Length = 750
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E + ++ DL+ VRV+ HP KG A+ F T+EAA
Sbjct: 325 KTVFIRNLSFDSEEEALGEVLQQFGDLKY----VRVVLHPDTEHSKGCAFAQFMTQEAAQ 380
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 381 KCLAAASPEAEGGGLKLDGRQLKVDLA 407
>gi|261197860|ref|XP_002625332.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595295|gb|EEQ77876.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|327355588|gb|EGE84445.1| hypothetical protein BDDG_07390 [Ajellomyces dermatitidis ATCC
18188]
Length = 301
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 30/136 (22%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VGNL +V + L ++ KFG I SVRI + D++ +G
Sbjct: 88 TIYVGNLFFEVTAEDLKRDLAKFGTIHSVRI----VYDSRGLSRG--------------F 129
Query: 287 AYIVFKS-EQSTEAALAFNMAVIGGNHIRLDR----ACPPRKKLKGEDAPLYDIKKTVFV 341
AY+ F S E + A NM++ G I ++ + P+ + G KT+F+
Sbjct: 130 AYVQFDSIEAAEAAIAELNMSLYEGRRIVVNYSTRGSTEPKTRATGP-------TKTLFI 182
Query: 342 GNLPFDVKDEEIYQLF 357
GNL F++ D E+ ++F
Sbjct: 183 GNLSFEMTDRELNEMF 198
>gi|58261610|ref|XP_568215.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115791|ref|XP_773609.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256235|gb|EAL18962.1| hypothetical protein CNBI2230 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230297|gb|AAW46698.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 304
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL + LI E + +++ P+ + +P+ +I++ A
Sbjct: 14 TVYLGNLDERCTD-ALIWELM---------LQAGPVSNVFLPKD------RISQ-AHQGF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F SE E A+ N + G IR+++A +K++ D+ +FVGNL
Sbjct: 57 GFCEFMSEADAEYAVKIMNQIKLYGKPIRVNKASYDKKQV--------DVGANLFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+V ++ +Y F L E ++ R P + KG A++ + EAA+L I+ N
Sbjct: 109 PNVDEQTLYDTFSTFGTL---AEQPKIARDPTTGLSKGHAFIAYNDFEAADLAIENMN 163
>gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio]
gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio]
Length = 637
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ + AL N + G ++LD+A + K +D+ +T+FV NLP
Sbjct: 262 FGYVDFASEEELQKALGLNGKKLMGQPVKLDKA---KSKENSQDSKKERDSRTLFVKNLP 318
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+ V EE+ ++F D+ + H +GIAY+ FK+ A
Sbjct: 319 YSVTQEELKEIFDQAVDIPDT--------DGHSGSSRGIAYLEFKSEAIA 360
>gi|169617435|ref|XP_001802132.1| hypothetical protein SNOG_11896 [Phaeosphaeria nodorum SN15]
gi|111059820|gb|EAT80940.1| hypothetical protein SNOG_11896 [Phaeosphaeria nodorum SN15]
Length = 450
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 27/190 (14%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K++L ++ E+ + +I V + P K +N+ A
Sbjct: 127 VWIGNLPWSATKESLRNFLMENTEMTAEQITRVHMPPPTKPVNPNWSTKPLNKG----FA 182
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKK----------LKGEDAPL 332
Y+ F +E + +A+A + G + + A P + K KG
Sbjct: 183 YVDFSTELAMYSAIALTETKMDGRALLIKNAKSFEGRPDKPKEEQEQDTGRGAKGAVKSA 242
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
+ K VFVGNL FDV EE+ + CG +E + + KG A+V F
Sbjct: 243 HPPNKRVFVGNLSFDVTKEELQVHYSQCG------PIENLHMATFEDSGKCKGYAWVTFG 296
Query: 391 TREAANLVIK 400
EAA +K
Sbjct: 297 DVEAATSAVK 306
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 73 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 111
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 112 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 160
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 161 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKK 216
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 217 VLEKKFHTVSGSKCEIKVAQ 236
>gi|115532084|ref|NP_001021932.1| Protein SAP-49 [Caenorhabditis elegans]
gi|55977846|sp|Q09442.2|SF3B4_CAEEL RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Spliceosome-associated protein 49
gi|50511896|emb|CAB60993.2| Protein SAP-49 [Caenorhabditis elegans]
Length = 388
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + ++ G P++ +P+ ++ N
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAG----------PVVSVNMPKD------RVTANHQGF- 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G I++++A K + D+ +FVGNL
Sbjct: 57 GFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM--------DVGANIFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R KG A++ F + EA++ ++ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +S+A + + +R A
Sbjct: 166 FLCNRAITVSYAFKRDSKGERHGTA 190
>gi|358369062|dbj|GAA85677.1| RNA binding protein Rnp24 [Aspergillus kawachii IFO 4308]
Length = 371
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 33/188 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEF---IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNLP K + K F F + RI +P+ G K N+
Sbjct: 75 VWIGNLPFFATKDDVRKFFTTNCSFADTTITRIH--------MPKSGDKHGKAQNKG--- 123
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDAPLYDIK--- 336
AY+ F ++++++ A+ + ++ G + + A P + K +G++A
Sbjct: 124 -FAYVDFSTQKASQEAMGLSEQLLSGRRVLIKDAKNFSGRPEKPKGEGQNASSGAASGNP 182
Query: 337 --KTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
K +FVGNL FD E I + F CG ++ V V KG A+V+F+
Sbjct: 183 PSKRIFVGNLGFDATKELIEEHFSQCG------TIANVHVATFQDSGKCKGYAWVVFEDL 236
Query: 393 EAANLVIK 400
AA +K
Sbjct: 237 AAAEAAVK 244
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 53/226 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + DE I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDELIKKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTREAANLVIK-RRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
F T+EAA I+ N ++ ++ ++N P+ V P N
Sbjct: 248 FTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPN---SVGPNAN 290
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V + L F + G + +I I E +
Sbjct: 8 RTLYVGNLDTSVSEDLLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + Q AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQCAATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+++ + + + F ++ + R++R P KG A+V F + A I N
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNG 159
Query: 405 K-LRDRELR 412
+ L R +R
Sbjct: 160 QWLGSRSIR 168
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV L + F++ G P++ +P+ N+
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSG----------PVVSVNMPKDRV-------TNSHQGF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G I++++A K + D+ +FVGNL
Sbjct: 57 GFVEFMGEEDADYAIKIMNMIKLYGKPIKVNKASAHEKNM--------DVGANIFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ ++ F + ++ +++R KG A+V F + EA++ I+ + +
Sbjct: 109 PEVDEKLLFDTFSAFGVI---LQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 FLCNRAITVSYA 177
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L KEF G + R+ I ++ + + +
Sbjct: 172 TIFVGRLSWSIDDEWLKKEFEHIGGVVGARV---------------IYERGTDRSRG--Y 214
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAP--LYDI----KKTV 339
Y+ F+ + E A+ I G I +D + K G D D+ T+
Sbjct: 215 GYVDFEDKSYAEKAIQEMQGKEIDGRPINVDMST--SKPAGGNDRAKKFGDVPSEPSDTL 272
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
F+GNL F+ + IY+ F ++ S VR+ HP KG YV F E A +
Sbjct: 273 FLGNLSFNADKDNIYETFSKYGEIIS----VRIPTHPETEQPKGFGYVQFSNIEDAKKAL 328
Query: 400 KRRNLKLRD-RELRLSHA 416
+ + D R +RL ++
Sbjct: 329 EGLQGEYIDNRAVRLDYS 346
>gi|260814928|ref|XP_002602165.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
gi|229287472|gb|EEN58177.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
Length = 224
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K TV+V NLPF + + +++++F + V V V+R R KG+A+VLF RE A
Sbjct: 9 KTTVYVSNLPFALTNNDLHKIF----EKYGKVVKVTVMRDKITRQSKGVAFVLFLKREEA 64
Query: 396 NLVIKRRNLK-LRDRELRLSHAQQN 419
+ ++ N K L R ++ S A+ N
Sbjct: 65 HACVRALNGKVLFGRTVKCSMAKDN 89
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 29/198 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L EF G + S R+ I +G + +
Sbjct: 212 TIFVGRLSWSIDDEWLKTEFEHIGGVISARV---------IYERGTERSRG--------Y 254
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP-PRKKLKGEDAPLY-DI----KKTV 339
Y+ F+ + E A+ I G I +D + P K + A + D+ T+
Sbjct: 255 GYVDFEDKSYAEKAIKEMQGKEIDGRPINVDMSTSKPASNPKEDRAKKFGDVPSQPSDTL 314
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKT-REAANLV 398
F+GNL F+ + I++LF S+ +VR+ HP KG YV + + EA +
Sbjct: 315 FLGNLSFNADRDNIFELFKDYG----SIISVRIPTHPETNQPKGFGYVQYASIEEAQKAL 370
Query: 399 IKRRNLKLRDRELRLSHA 416
K + + +R +RL +
Sbjct: 371 DKLQGEYIDNRPVRLDFS 388
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|395536629|ref|XP_003770315.1| PREDICTED: nucleolin [Sarcophilus harrisii]
Length = 668
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 51/243 (20%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F GNL L K G D + + ++D +I A
Sbjct: 366 LFAGNLNFNKSASEL-----KTGISDFFAKKDLTVVDVRI-------------GATRKFG 407
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
Y+ F+S + E A+ + + + G+ I+L++A ++ K DA +T+FV NLP+
Sbjct: 408 YVEFESAEDMEKAMELSGSKVLGSEIKLEKA---KENKKDRDA------RTLFVKNLPYK 458
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVI-KRRNL 404
V EE+ ++F E ++E IR + G KGIAYV FKT + + +++
Sbjct: 459 VTQEELKEVF------EDAIE----IRLVCTKDGTPKGIAYVEFKTEADVDKALEEKQGT 508
Query: 405 KLRDRELRL------SHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAM 458
++ R L L S Q+N K + NS P DS+TL N + S
Sbjct: 509 EIDGRALILDYTGEKSQGQENARGGKN-NAWGGSNSKP----ADSKTLVLNNLAYSATEE 563
Query: 459 SYQ 461
S Q
Sbjct: 564 SLQ 566
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 65 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 104 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 152
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 153 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 208
Query: 398 VIKRR 402
V++++
Sbjct: 209 VLEKK 213
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V + L F + G + +I I E +
Sbjct: 8 RTLYVGNLDASVSEDLLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + QS AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQSAATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+++ + + + F ++ + R++R P KG A+V F + A I N
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNG 159
Query: 405 K-LRDRELR 412
+ L R +R
Sbjct: 160 QWLGSRSIR 168
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 53/226 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + DE I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDELIKKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTREAANLVIK-RRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
F T+EAA I+ N ++ ++ ++N P+ V P N
Sbjct: 248 FTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPN---SVGPNAN 290
>gi|342320413|gb|EGU12353.1| Splicing factor 3b subunit 4 [Rhodotorula glutinis ATCC 204091]
Length = 317
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T ++GNL +V L+ E + +++ P+ + +P+ + Q +
Sbjct: 14 TCYLGNLDERVTD-ALVWELM---------LQAGPVANVHLPKDRISMTHQ-------GY 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F +E+ E A N + G IR+++A RK+L DI +F+GNL
Sbjct: 57 GFCEFLTEEDAEYACKIMNQIKLFGKPIRVNKASSDRKQL--------DIGANLFIGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ + +Y F L V+ ++ R KG +V + + EAA+ I+ N +
Sbjct: 109 PNIDERMLYDTFTAFGTL---VQPAKISRDVGTGASKGFGFVSYDSFEAADAAIESMNGQ 165
Query: 406 -LRDRELRLSHA-------QQNCTPSKRKDVAPA 431
L ++ + +S+A +++ TP++R A A
Sbjct: 166 FLMNKPVTVSYAFKKDGKGERHGTPAERLLAAQA 199
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 83 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 121
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 122 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 170
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ FK E
Sbjct: 171 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFKEEEPVKK 226
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 227 VLEKKFHTISGSKCEIKVAQ 246
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 39/204 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FVG L + + L +EF G + S R+ I ++ ++ +
Sbjct: 236 TLFVGRLSWSIDDEWLKREFEPLGGVISARV---------------IFERATGKSRG--Y 278
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGED----------APLY 333
Y+ F S+ + E AL + I G I LD + P + D AP
Sbjct: 279 GYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGDTPSAP-- 336
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
T+F+GNL F+ + + ++F S+ +VR+ HP KG YV + + +
Sbjct: 337 --SDTLFLGNLSFNANRDNLSEVFSEYG----SIVSVRIPTHPDTEQPKGFGYVQYGSVD 390
Query: 394 AANLVIKRRNLK-LRDRELRLSHA 416
A ++ N + + R +RL +
Sbjct: 391 EAKAALEALNGEYIEGRPVRLDFS 414
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 18/95 (18%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+F+GNL + L + F ++G I SVRI + P DT+ P+
Sbjct: 339 TLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHP--DTEQPKG---------------F 381
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACP 320
Y+ + S +AAL A N I G +RLD + P
Sbjct: 382 GYVQYGSVDEAKAALEALNGEYIEGRPVRLDFSAP 416
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ FK E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTISGSKCEIKVAQ 230
>gi|341882220|gb|EGT38155.1| hypothetical protein CAEBREN_32522 [Caenorhabditis brenneri]
gi|341882722|gb|EGT38657.1| hypothetical protein CAEBREN_06124 [Caenorhabditis brenneri]
Length = 388
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + ++ G P++ +P+ ++ N
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAG----------PVVSVNMPKD------RVTANHQGF- 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G I++++A K + D+ +FVGNL
Sbjct: 57 GFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM--------DVGANIFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R KG A++ F + EA++ ++ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +S+A + + +R A
Sbjct: 166 FLCNRAITVSYAFKRDSKGERHGTA 190
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 32/213 (15%)
Query: 215 EEGFDD--EGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGA 272
E+G DD +G + +IFV NL K L ++F F ++++ P
Sbjct: 639 EDGTDDVLDGPTV-SIFVKNLNFSTTTKELTEKFKPFSGFVVAQVKTKPD---------- 687
Query: 273 ILQKQINENADSVHAYIVFKS-EQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP 331
K N+ + FK+ EQ+ A + AV+ G+ I+L + +G AP
Sbjct: 688 --PKNANKTLSMGFGFAEFKTKEQAVAVIDALDGAVLDGHRIQLKLS-----HRQGSAAP 740
Query: 332 LYDIKKT-----VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAY 386
K + V NLPF+ + +++++LF L+S VRV + + +G A+
Sbjct: 741 TSGQSKKKSSGKIVVKNLPFEAERKQVFELFSSFGQLKS----VRVPKK-FDKSTRGFAF 795
Query: 387 VLFKT-REAANLVIKRRNLKLRDRELRLSHAQQ 418
V F +EA N + + + + L R L + HA+Q
Sbjct: 796 VEFLLPKEAENAMEQLQGVHLLGRRLVMQHAEQ 828
>gi|7417424|gb|AAF62554.1| nucleolin [Oncorhynchus mykiss]
Length = 255
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F S + + A+ N G +++D+A R K ++ +T+FV NLP
Sbjct: 67 FGYVEFASAEDMQTAMELNGKKCMGQELKMDKA---RSKGNSQEEKKDRDARTLFVKNLP 123
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAAN-LVIKRR 402
F ++++ ++F ++VE IR P + G +GIAY+ FKT A+ ++ + +
Sbjct: 124 FSATEDDLKEVFA------NAVE----IRIPTGQDGSNRGIAYIAFKTEAMADKMLTEAQ 173
Query: 403 NLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGNRSNSKVAMSYQ 461
++ R + + + R PP + +S+TL N S S S Q
Sbjct: 174 GADVQGRSIMVDYTGIKSQKGGR---------PPAQAAAESKTLIVNNLSYSATEDSLQ 223
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 53/226 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTMKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + DE I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDELINKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTREAANLVIK-RRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
F T+EAA I+ N ++ ++ ++N P+ V P N
Sbjct: 248 FTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPN---SVGPNAN 290
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L F + G + +I I E +
Sbjct: 8 RTLYVGNLDSSVSEELLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + Q AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQCAATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+++ + + + F ++ + R++R P KG A+V F + A I N
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNG 159
Query: 405 K-LRDRELR 412
+ L R +R
Sbjct: 160 QWLGSRSIR 168
>gi|452982819|gb|EME82577.1| hypothetical protein MYCFIDRAFT_215010 [Pseudocercospora fijiensis
CIRAD86]
Length = 440
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 73/184 (39%), Gaps = 32/184 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV--PIIDTKIPRKGAILQKQINENADSV 285
I++GNL K K L K + G ID I V P+ D KQ N+
Sbjct: 100 IWIGNLSFKTTKDALRKFLLDRGGIDESSITRVHLPMND-----------KQQNKG---- 144
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRA----CPPRKKLKGEDAPLYDI------ 335
AYI F SE AL + ++ G + + A P K +DA +
Sbjct: 145 FAYIDFNSEVVLNIALTLSENLVDGRKVLIKNAKSFEGRPEKTKADKDAAENGVVSKKPA 204
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA- 394
K VFVGNL FD+ +E+ + F VE V + KG +V F EA
Sbjct: 205 SKRVFVGNLGFDMTRDELAEHFAQA----GQVEDVFLATFEDTGKCKGFGWVTFADLEAS 260
Query: 395 ANLV 398
AN V
Sbjct: 261 ANAV 264
>gi|367015182|ref|XP_003682090.1| hypothetical protein TDEL_0F00680 [Torulaspora delbrueckii]
gi|359749752|emb|CCE92879.1| hypothetical protein TDEL_0F00680 [Torulaspora delbrueckii]
Length = 388
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEF---IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K+ L++ F K E D +I I+ +P + Q + +
Sbjct: 111 VWIGNLSFDTTKEDLVRFFSAKTKESE-DGAQITEETIVRVNMP----LAQNDGKKIRNK 165
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKG--EDAPLYDIKKT---- 338
Y+ F++ + EAA++ + + + G ++ + + K G + L + K
Sbjct: 166 GFCYMDFETTEQMEAAISLSESHLNGRNLLIKNS----KSFDGRPDKNDLVSLSKNPPSR 221
Query: 339 -VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FD DE + + F CG + +R+ KG A+V FK E A
Sbjct: 222 ILFVGNLSFDTTDELLKKHFQHCG------EIVKIRMATFQDSGKCKGFAFVDFKDEEGA 275
Query: 396 NLVIKRRNL-KLRDRELRLSHAQ 417
+K + K+ R +R+ + +
Sbjct: 276 TNALKDKGCRKIAQRPIRMEYGE 298
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 80/216 (37%), Gaps = 59/216 (27%)
Query: 227 TIFVGNLPLKVKKKTLIKEF---------IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
T++VGNL V L +EF + DS R R +D + P +K
Sbjct: 297 TLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPD---AAEKA 353
Query: 278 INENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP------ 331
NE N A + G +RLD A P DAP
Sbjct: 354 YNEK----------------------NGAFLQGREMRLDFASKPN-----ADAPPSARAA 386
Query: 332 ---------LYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGK 382
+ T+FVGNLPF ++ + + F + + V+++R+ K
Sbjct: 387 ERARKHGDVISPESDTLFVGNLPFSADEDSVSKFF----NKAAKVQSLRIPTDQESGRPK 442
Query: 383 GIAYVLFKTREAANLVIKRRN-LKLRDRELRLSHAQ 417
G AYV F + E A + N L R +RL +A+
Sbjct: 443 GFAYVTFSSVEDAKKAFETLNGSDLDGRPVRLDYAK 478
>gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + ++ G P++ +P+ ++ N
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAG----------PVVSVNMPKD------RVTANHQGF- 66
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G I++++A K + D+ +FVGNL
Sbjct: 67 GFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM--------DVGANIFVGNLD 118
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R KG A++ F + EA++ ++ N +
Sbjct: 119 PEVDEKLLYDTFSAFGVI---LQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 175
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +S+A + + +R A
Sbjct: 176 FLCNRAITVSYAFKRDSKGERHGTA 200
>gi|301615885|ref|XP_002937390.1| PREDICTED: nucleolin [Xenopus (Silurana) tropicalis]
Length = 705
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ E AL + I G+ +++++A K E+ D +T+FV N+P
Sbjct: 334 FGYVDFSSEEEVEQALKLSGKKILGSEVKIEKAMAFDKNKNAENKKERD-SRTLFVKNIP 392
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR-EAANLVIKRR 402
+ EE+ ++F E + IR P + G KGIAYV F EA + +++
Sbjct: 393 YSTTAEELQEIF----------ENAKDIRIPTGKDGANKGIAYVEFSNETEATKALEEKQ 442
Query: 403 NLKLRDREL 411
++ R +
Sbjct: 443 GAEIEGRSI 451
>gi|18399701|ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana]
gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana]
gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
D ++T+F+ NLPFDV EE+ Q F ++ES + ++ H + +G A+V FKT +
Sbjct: 558 DFERTLFIRNLPFDVTKEEVKQRFTVFGEVES----LSLVLHKVTKRPEGTAFVKFKTAD 613
Query: 394 AANLVI 399
A+ I
Sbjct: 614 ASVAAI 619
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|207341820|gb|EDZ69768.1| YNL175Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 315
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFI---KFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
+++GNL K L++ FI K E + R+ I +PR A K N +
Sbjct: 127 VWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAA---KNSNAMKNK 183
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKL--KGEDAPLYDIKK 337
Y+ FK+ + +A L + + + G ++ + + P + L ++ P +
Sbjct: 184 GFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPP----SR 239
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+FVGNL FDV D+ + + F CG + +R+ KG A++ FK E +
Sbjct: 240 ILFVGNLSFDVTDDLLRKHFQHCG------DIVKIRMATFEDSGKCKGFAFIDFKNEEGS 293
Query: 396 NLVIKRRNLK 405
+K ++ +
Sbjct: 294 TNALKDKSCR 303
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G L ++++G+L V + L ++F G I S+R+ + I
Sbjct: 7 GYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRV-----------------CRDIATR 49
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL---DRACPPRKKLKGEDAPLYDIKK 337
+AYI F+ E AL N VI G IR+ R RK G
Sbjct: 50 RSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------- 99
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
VF+ NL + ++ +Y F ++ S +V+ H +G +V F+T EAAN
Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILS----CKVVCDEHG--SRGYGFVHFETHEAANR 153
Query: 398 VIKRRN-LKLRDRELRLSH 415
I+ N + L DR++ + H
Sbjct: 154 AIQTMNGMLLNDRKVFVGH 172
>gi|115387941|ref|XP_001211476.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195560|gb|EAU37260.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T VGNL FD +I LF E V VR++ R KG YV F+T +
Sbjct: 80 TAHVGNLSFDATSADISDLFA-----ECGVTNVRIVEDKLTRSPKGFGYVEFETVDGLKK 134
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKRKDV--------APAVNSP-PKKFVLDSRTLG 447
+ L+ R +R+S A+ P K +DV P ++P P++ + D T G
Sbjct: 135 ALDLSGATLQGRAIRVSIAE----PPKERDVRELDWTRRGPLPDAPAPQRRIPDRSTFG 189
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|67525939|ref|XP_661031.1| hypothetical protein AN3427.2 [Aspergillus nidulans FGSC A4]
gi|40743716|gb|EAA62904.1| hypothetical protein AN3427.2 [Aspergillus nidulans FGSC A4]
gi|259485585|tpe|CBF82731.1| TPA: RNA binding protein Rnp24, putative (AFU_orthologue;
AFUA_3G05840) [Aspergillus nidulans FGSC A4]
Length = 357
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 85/209 (40%), Gaps = 28/209 (13%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I++GNL V K+ I+ F+ + I +P+ + N+ A
Sbjct: 72 IWIGNLAFSVTKED-IRRFL----TTNCSFTDATITRVHLPKPSDKSSRAQNKG----FA 122
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLKGEDAPLYDIK---KTV 339
Y+ F + ++ E AL + ++ G + + A P + + G +AP + K +
Sbjct: 123 YVDFSTPKALEEALGLSEQLVSGRRVLIKDAKNYKGRPEKSQDDGNNAPTSSGRPPSKRL 182
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
FVGNL FD E + + F CG +V V V KG A+V F+ EAA
Sbjct: 183 FVGNLSFDTTKEFLEEHFSQCG------TVTNVHVATFQDSGKCKGYAWVEFEDLEAAKT 236
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKRK 426
+ D E AQ+ P +RK
Sbjct: 237 AERGYKYITEDNEDEDDSAQK---PQRRK 262
>gi|303315541|ref|XP_003067778.1| RNA recognition motif containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240107448|gb|EER25633.1| RNA recognition motif containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|320035369|gb|EFW17310.1| hypothetical protein CPSG_05753 [Coccidioides posadasii str.
Silveira]
Length = 1296
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 36/202 (17%)
Query: 221 EGKLLR-------TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
EG++L T+FV N P + + + + F GEI VR S+
Sbjct: 884 EGRVLSVQLETKATLFVTNFPPEADESYIRRIFSPHGEIVEVRFPSLKF----------- 932
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
N Y+ F S AL + +G N + + P K+ A +
Sbjct: 933 -------NTHRRFCYVQFASAADAHDALELDHKSVGENLNLVVKISDPSKRQARSGA--F 983
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ + + + NL + ++++ +LF +E V R P G KG +V F T
Sbjct: 984 EEGREIHISNLDWKATEDDLIELFTAFGKVE-------VARIPTKADGGSKGFGFVAFST 1036
Query: 392 REAANLVIKRRNLKLRDRELRL 413
EAAN + + R R LR+
Sbjct: 1037 PEAANAALAMDQKEFRSRPLRV 1058
>gi|403346976|gb|EJY72898.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 310
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
++G + + +F+ +P + + I EF F EI + I++ K+PR +
Sbjct: 77 NKGSISKQVFISGIPYECNEDE-ITEF--FNEIKA------NIVEIKLPRYQ-------D 120
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK-------GEDAPL 332
+A++ S+++ + ALA I G ++ + A R L E P
Sbjct: 121 SGRCRGYAHVTLNSQKAVDKALAMTGQSIKGRYLDIKEAEGQRSSLSKDQVRQIAESMP- 179
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
D KT+FV LP++ ++++I F +++S +R+ + + KG AY+ F
Sbjct: 180 -DDCKTLFVKGLPYEFREDDIGDRFRKFGEIKS----IRLSYNWQTKQFKGFAYLTFGNH 234
Query: 393 EAANLVIKRRNLK-LRDRELRLSH 415
++A + N K ++ R++++ +
Sbjct: 235 QSAKKALLEMNGKEVKGRQIKVDY 258
>gi|242094724|ref|XP_002437852.1| hypothetical protein SORBIDRAFT_10g003760 [Sorghum bicolor]
gi|241916075|gb|EER89219.1| hypothetical protein SORBIDRAFT_10g003760 [Sorghum bicolor]
Length = 548
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 35/145 (24%)
Query: 392 REAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVA--------PAVNSPPKKFVLDS 443
+EAAN + ++R+LK+RDR L L+HA+ T K +V V++P KF
Sbjct: 406 KEAANSIARKRDLKIRDRLLSLTHAKPVGTGPKEMEVQKRSSVPKHKEVSTPGSKF---- 461
Query: 444 RTLGSGNRSNSKVAMSYQGLQASKSCTQKKVHSGSSGVVKMKKSRTQ---KGERPK---- 496
GS A+SYQG +SC +SGVVK K Q KG++ K
Sbjct: 462 -NEGSDKAKRKASALSYQG----QSC--------ASGVVKKVKVNQQPSNKGKQSKTSEI 508
Query: 497 ---VQPEKRPAVALRKARAKAPKDV 518
+ KRPAVA RKA+ A K +
Sbjct: 509 GASARKAKRPAVAARKAKLLAKKQL 533
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 72 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 110
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 111 NTGRSRGFGFILFKDSSSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 159
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P + +G ++ FK +
Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGE----IEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQ 235
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 28/199 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
++IFVG L V + L +EF GE+ S R+ Q N
Sbjct: 314 KSIFVGRLSWNVDNEWLAQEFADCGEVVSARV-----------------QMDRNTGKSRG 356
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC--PPRKKLKGEDAPLYD----IKKTV 339
AY+ F + ++ +AAL I G + +D P + A D +
Sbjct: 357 FAYVTFATAEAAQAALQLTGKEIDGRPVNIDMTTERDPNAARQNRAAAYGDKPSEPSAVL 416
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVGNL F ++ +++ F D++S VRV KG AYV F E A
Sbjct: 417 FVGNLSFSATEDLLWETFSEYGDVKS----VRVPTDRETGSPKGFAYVEFSDVETAKSAY 472
Query: 400 KRRNLK-LRDRELRLSHAQ 417
+ + K + R +RL ++Q
Sbjct: 473 EGVSGKEIAGRAVRLDYSQ 491
>gi|440632502|gb|ELR02421.1| hypothetical protein GMDG_05479 [Geomyces destructans 20631-21]
Length = 294
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+++VGNL +V + L +EF +GEI + RI P +G L K
Sbjct: 104 SVYVGNLLFEVTPQDLEREFAPYGEIVTSRIAQDP--------RG--LSKGF-------- 145
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
YI F+ +S A+ N + G + ++ R K ++ P KT+F+GNL
Sbjct: 146 GYIEFRDIESARNAIEQRNQTIFEGRRLIVNYMAKTRSNAKSKNPP----SKTLFIGNLA 201
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
F++ D ++ +LF D+ + ++ VRV +G A+ F E+A
Sbjct: 202 FEMTDADLNKLF---RDIVNVID-VRVAIDRRTGQPRGFAHADFTDVESA 247
>gi|119191127|ref|XP_001246170.1| hypothetical protein CIMG_05611 [Coccidioides immitis RS]
gi|392869018|gb|EAS30379.2| pre-mRNA splicing factor [Coccidioides immitis RS]
Length = 1296
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 36/202 (17%)
Query: 221 EGKLLR-------TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAI 273
EG++L T+FV N P + + + + F GEI VR S+
Sbjct: 884 EGRVLSVQLETKATLFVTNFPPEADESYIRRIFSPHGEIVEVRFPSLKF----------- 932
Query: 274 LQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLY 333
N Y+ F S AL + +G N + + P K+ A +
Sbjct: 933 -------NTHRRFCYVQFASAADAHDALELDHKSVGKNLNLVVKISDPSKRQARSGA--F 983
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKT 391
+ + + + NL + ++++ +LF +E V R P G KG +V F T
Sbjct: 984 EEGREIHISNLDWKATEDDLIELFTAFGKVE-------VARIPTKADGGSKGFGFVAFST 1036
Query: 392 REAANLVIKRRNLKLRDRELRL 413
EAAN + + R R LR+
Sbjct: 1037 PEAANAALAMDQKEFRSRPLRV 1058
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G L ++++G+L V + L ++F G I S+R+ + I
Sbjct: 7 GYPLASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRV-----------------CRDIATR 49
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL---DRACPPRKKLKGEDAPLYDIKK 337
+AYI F+ E AL N VI G IR+ R RK G
Sbjct: 50 RSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVG---------- 99
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
VF+ NL + ++ +Y F ++ S +V+ H +G +V F+T EAAN
Sbjct: 100 NVFIKNLDESIDNKALYDTFSAFGNILS----CKVVCDEHG--SRGYGFVHFETHEAANR 153
Query: 398 VIKRRN-LKLRDRELRLSH 415
I+ N + L DR++ + H
Sbjct: 154 AIQTMNGMLLNDRKVFVGH 172
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 37/187 (19%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 64 GEEDAGKM----FVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDP--------------- 104
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
N +I+FK + LA RLD R P+K + + P+
Sbjct: 105 --NTGRSRGFGFILFKEPSGVDKVLA-------QKEHRLDGRQIDPKKAMAMKKEPV--- 152
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K +FVG L + +E I + F ++E+ + + P +G ++ FK EA
Sbjct: 153 -KKIFVGGLNPETTEERIREYFGAFGEIET----IELPMDPKSNKRRGFVFITFKEEEAV 207
Query: 396 NLVIKRR 402
+++++
Sbjct: 208 KKILEKK 214
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 91/237 (38%), Gaps = 39/237 (16%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+KRK D+E ++ +K + EG L FVGNL V ++ L EF +FGE+ VR
Sbjct: 237 QKRKAEDDE--ELAAPKKTKVESSEGGNL---FVGNLSWNVDEEWLRSEFEEFGELSGVR 291
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRL 315
I + D R Y+ F + A A V + G + +
Sbjct: 292 I----VTDRDSGRSRGF-------------GYVEFVNAADAAKAHAAKKDVELDGRKLNI 334
Query: 316 DRA-----CPPRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D A PR++ + D T+F+GN+ F + I + F S
Sbjct: 335 DFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFS----EHGS 390
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN---LKLRDRELRLSHAQQNC 420
+ VR+ P KG YV F + + A + N L R L S +QN
Sbjct: 391 ILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQNS 447
>gi|339243511|ref|XP_003377681.1| splicing factor U2AFsubunit [Trichinella spiralis]
gi|316973494|gb|EFV57074.1| splicing factor U2AFsubunit [Trichinella spiralis]
Length = 402
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 32/203 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSV-RIRSVPIIDTKIPRKGAILQKQINENADS 284
R ++VGN+P ++ ++ F + + + + PI+ +I N D
Sbjct: 88 RRLYVGNIPFGCTEEAMMDFFNQQMHLCGLAQALGNPILACQI-------------NLDK 134
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPR--KKLKGEDAPLYDIKKTV--- 339
A+I F+S T AA+AF+ G +++ R PR + L G++ L + +V
Sbjct: 135 NFAFIEFRSIAETTAAMAFDGINYQGQSLKIRR---PRDYQPLPGQNDTLAGLVSSVVAD 191
Query: 340 -----FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
F+G LP + +E++ +L L +A +I+ P ++ KG A+ +
Sbjct: 192 SPYKLFIGGLPNYLSEEQVKELLISFGQL----KAFNLIKDPATQISKGYAFAEYSDSTL 247
Query: 395 ANLVIKRRN-LKLRDRELRLSHA 416
+ I N ++L D++L + A
Sbjct: 248 TDQAIAGLNGMQLGDKKLVVQLA 270
>gi|255711606|ref|XP_002552086.1| KLTH0B06886p [Lachancea thermotolerans]
gi|238933464|emb|CAR21648.1| KLTH0B06886p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFI-KFGEID-SVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+++GNL K+ L + FI K E+D R+ I+ +P + Q + +
Sbjct: 125 VWIGNLTFDTSKEDLCRFFIAKTKELDPDSRVEESDILRVNLP----LAQNDGKQVKNKG 180
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKL--KGEDAPLYDIKKT 338
A++ F++++ +A +A + + + G ++ + + P + L ++ P +
Sbjct: 181 FAHMNFRTQKQMDAVIALSESHLNGRNMLIKNSASFDGRPDKNDLISMSKNPP----SRI 236
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+FVGNL FD DE + + F CG + +R+ KG A+V FK E
Sbjct: 237 LFVGNLSFDTTDELLKKHFQHCG------EIVKIRMATFQDTGKCKGFAFVDFKNEEGPT 290
Query: 397 LVIKRRNL-KLRDRELRLSHAQ 417
+K + ++ R LR+ +
Sbjct: 291 NALKDKTCRRIAGRPLRMEFGE 312
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 49/213 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ L + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETHILREAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDAP------------L 332
++ F + EAA+ A N +G IR + + PP K E AP +
Sbjct: 141 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKG-PNEGAPSSKRVKQPTFDEV 199
Query: 333 YD----IKKTVFVGNLPFDVKDEEIYQ-LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYV 387
Y+ TV+ G +V EE+ Q F ++ VRV R KG A++
Sbjct: 200 YNQSSPTNTTVYCGGFTSNVITEELMQSTFSQFGQIQD----VRVFRD------KGYAFI 249
Query: 388 LFKTREAANLVIK-RRNLKLRDRELRLSHAQQN 419
F T+EAA I+ N ++ ++ ++N
Sbjct: 250 RFTTKEAAAHAIEATHNTEISGHTVKCFWGKEN 282
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V ++ L F + GE+ +I I E +
Sbjct: 8 KTLYVGNLDASVTEEFLCALFGQIGEVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSE-QSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + + A A N V ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFLEFTNHASAATALAAMNRRVFLEKEMKVNWATSPGNQPKTDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+++ + + F ++ + R++R P KG A+V F + A I+ N
Sbjct: 104 SPEIETHILREAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 159
Query: 405 K-LRDRELR 412
+ L R +R
Sbjct: 160 QWLGSRSIR 168
>gi|68472133|ref|XP_719862.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
gi|68472368|ref|XP_719745.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441577|gb|EAL00873.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441703|gb|EAL00998.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
Length = 396
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL ++ LI+ + +I I IP+KG ++ A
Sbjct: 106 VWIGNLSFDTTREDLIRFIVGKTTTSDPKITEEDITRVNIPKKGNQIKG---------FA 156
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKK--------LKGEDAPLYD 334
Y+ S E + + +++ G + + A P + K + + P
Sbjct: 157 YVDVPSSSHVETIVGLSESILNGRKLLIKDANSFEGRPEQSKSDATQSGGINSSNPP--- 213
Query: 335 IKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
+ +FVGNL FD ++ + + F CG + +R+ KG A++ FK
Sbjct: 214 -SRILFVGNLSFDTTEDLLEEHFRHCG------EIVKIRMATFQDTGKCKGFAFIDFKDE 266
Query: 393 EAANLVIKRRNLK-LRDRELRLSHAQQNCT--PSKRKDVAPAVNSPPKKFVLDSRTL 446
E A +K + K L +R+LR+ + + P + D N+ + ++RT+
Sbjct: 267 EGATTALKSKLTKMLINRKLRMEYGEDRSKRRPKRANDFGDHSNNNNDSYKENNRTV 323
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 185 AKEEEGKKVGVGEKRKKADN--ETEDMLVHRKEEGFDD---EGKLLRTIFVGNLPLKVKK 239
A+EEEG+ +G D E+ED + GF + E KL FVGNLP V
Sbjct: 77 AEEEEGEDGSIGGTSVTVDESFESEDGV------GFPEPPEEAKL----FVGNLPYDVDS 126
Query: 240 KTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAY---IVFKSEQS 296
+ L F + G ++ I + N + D + + E++
Sbjct: 127 QALAMLFEQAGTVE-------------------ISEVIYNRDTDQSRGFGFVTMSTVEEA 167
Query: 297 TEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVFVGNLPFDVKDEEIYQ 355
+A FN + G + ++RA P + + E P +YD ++VGNLP+DV + +
Sbjct: 168 EKAVEKFNSFEVNGRRLTVNRAAP--RGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLER 225
Query: 356 LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK-LRDRELRLS 414
LF V RV+ +G +V N+ I + + L R ++++
Sbjct: 226 LFSE----HGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVN 281
Query: 415 HAQQ 418
A++
Sbjct: 282 VAEE 285
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 310 GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA 369
GN P ++ E + + ++V NL V DEE+ QLF LE
Sbjct: 47 GNEGERRSTSPSSNQMASEHGDIANPGNNLYVANLAHRVTDEELRQLFEKFGRLEK---- 102
Query: 370 VRVIRHPHMRVGKGIAYVLFK-TREAANLVIKRRNLKLRDRELRLSHAQQNC 420
+I P R +G A+V F+ R+A++ V + ++ R +R+ HA++ C
Sbjct: 103 CEIIIDPISRESRGFAFVTFEDVRDASDAVQELNGKDIQGRRMRVEHAKRKC 154
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 47/220 (21%)
Query: 215 EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAIL 274
E G DD+ R +FVG L + +K L F ++GEIDS+ +++ P T +G
Sbjct: 33 EIGRDDD----RKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDP---TTGRSRG--- 82
Query: 275 QKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYD 334
A+IV+KS S + +A G+HI ++ P KK K
Sbjct: 83 -----------FAFIVYKSADSIDKVVA------AGDHIINNKKVDP-KKAKARTG---- 120
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEA-VRVIRHPHMRVGKGIAYVLFKTRE 393
+FVG L ++ D+EI F ++ VE + + + R K ++ F +
Sbjct: 121 ---KIFVGGLIPEISDDEIRAYFAQFGNI---VEMEMPFDKQKNQR--KAFCFITFDSET 172
Query: 394 AANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
N ++K + +E+ + A TP + D AP +N
Sbjct: 173 VVNELLKTPKQTISGKEVDVKKA----TP--KPDNAPMMN 206
>gi|321257040|ref|XP_003193447.1| hypothetical protein CGB_D2450C [Cryptococcus gattii WM276]
gi|317459917|gb|ADV21660.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 308
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL K + + ++ G + +V L K A
Sbjct: 14 TVYLGNLDEKCTDALIWELMLQAGPVSNV-----------------FLPKDRISQAHQGF 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F SE E A+ N + G IR+++A +K++ D+ +FVGNL
Sbjct: 57 GFCEFMSEADAEYAVKIMNQIKLYGKPIRVNKASYDKKQV--------DVGANLFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
+V ++ +Y F L + ++ R P + KG A++ + EAA+L I+ N
Sbjct: 109 PNVDEQTLYDTFSTFGTL---ADQPKIARDPTTGLSKGHAFIAYNDFEAADLAIENMN 163
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 42/188 (22%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC----PPR--KKLKGEDAPLYD------ 334
++ F + E A+ + N +G IR + + PPR K G A +D
Sbjct: 141 FVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQS 200
Query: 335 --IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTR 392
TV+ G + + +E + Q+F ++ +R R KG A++ F T+
Sbjct: 201 SPTNCTVYCGGIVEGLTEELVEQVFSRF----GTIVEIRAFRD------KGYAFIKFSTK 250
Query: 393 EAANLVIK 400
EAA I+
Sbjct: 251 EAATTAIE 258
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L F G +++ ++ I E
Sbjct: 8 RTLYVGNLDPSVTEELLCALFTNIGPVNACKV--------------------IREPGSDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + AL A N + ++++ A P + K + + Y I FVG+L
Sbjct: 48 YAFLEFDTHSGAATALAAMNGRLFLDKEMKVNWATTPGNQPKLDTSNHYHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF-KTREAANLVIKRRN 403
+++ + + F ++ + R++R P KG A+V F K +A N +
Sbjct: 104 SPEIETHTLKEAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNG 159
Query: 404 LKLRDRELR 412
L R +R
Sbjct: 160 QWLGSRSIR 168
>gi|328852926|gb|EGG02068.1| hypothetical protein MELLADRAFT_110457 [Melampsora larici-populina
98AG31]
Length = 332
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 37/129 (28%)
Query: 307 VIGGNHIRLDRACPPRKKLKGEDAPLYD---IKKT----VFVGNLPFDVKDEEIYQLFCG 359
VIG IR RK+ K A Y+ IKK+ +FVGNLPFD+ E++ F
Sbjct: 93 VIGAAAIR-------RKRKKAAQARKYEEEKIKKSSKLILFVGNLPFDMTSEKLTSFF-- 143
Query: 360 LNDLESSVEAVRVIRHPHMR--------VGKGIAYVLFKTREAANLVIKRRNLKLRDREL 411
L E E VR++ H + KG +V FKT A + L
Sbjct: 144 LEHCEEEPE-VRLMTHKSTKNETGQPTNATKGCGFVEFKTSAAL------------QKAL 190
Query: 412 RLSHAQQNC 420
RL H NC
Sbjct: 191 RLHHTPMNC 199
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 45/191 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ L F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETHILRDAFAPFGEISNCRIVRDP---QTLKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC--PPRKKLKGEDA------PLYD---- 334
++ F + EAA+ A N +G IR + + PP K +G + P +D
Sbjct: 141 FVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYN 200
Query: 335 ----IKKTVFVGNLPFDVKDEEIYQ-LFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
TV+ G +V E++ Q F ++ VRV R KG A++ F
Sbjct: 201 QSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQD----VRVFRD------KGYAFIRF 250
Query: 390 KTREAANLVIK 400
T+EAA I+
Sbjct: 251 TTKEAAAHAIE 261
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 31/208 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+T++VGNL V + + F + GE+ +I I E +
Sbjct: 8 KTLYVGNLDASVTEVFICTLFGQIGEVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F S + ALA N V+ ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFLEFTSHTAAATALAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+++ + F ++ + R++R P KG A+V F + A I+ N
Sbjct: 104 SPEIETHILRDAFAPFGEISN----CRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNG 159
Query: 405 K-LRDRELRLSHAQQNCTPSKRKDVAPA 431
+ L R +R + + + PSK + AP+
Sbjct: 160 QWLGSRSIRTNWSTRK-PPSKPNEGAPS 186
>gi|47222076|emb|CAG12102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K TV+V NLPF + + ++++LF V V +++ R KG+A+VLF RE+A
Sbjct: 9 KSTVYVSNLPFSLTNNDLHKLFTKYG----KVVKVTIVKDKDTRRSKGVAFVLFLDRESA 64
Query: 396 -NLVIKRRNLKLRDRELRLSHAQQN 419
N V N +L R ++ S A N
Sbjct: 65 RNCVRAVNNKQLFGRTVKASIAIDN 89
>gi|403355024|gb|EJY77076.1| FHA domain containing protein [Oxytricha trifallax]
Length = 628
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
T++V NLPF V D+++ LF CG + ++R+ + + G+G A++ +AA
Sbjct: 382 TIYVSNLPFSVTDKDLQDLFGDCG------KILSIRMPLNNQTKQGRGFAFITMADEKAA 435
Query: 396 NLVIKRRNLKLRDRELRLSHAQ 417
+ K DR LR+S A+
Sbjct: 436 RRALNYDGHKFYDRRLRVSQAE 457
>gi|308510552|ref|XP_003117459.1| CRE-SAP-49 protein [Caenorhabditis remanei]
gi|308242373|gb|EFO86325.1| CRE-SAP-49 protein [Caenorhabditis remanei]
Length = 389
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TI+VG L KV + L + ++ G P++ +P+ ++ N
Sbjct: 14 TIYVGGLDEKVSEAILWELMVQAG----------PVVSVNMPKD------RVTANHQGF- 56
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ + A+ NM + G I++++A K + D+ +FVGNL
Sbjct: 57 GFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM--------DVGANIFVGNLD 108
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V ++ +Y F + ++ +++R KG A++ F + EA++ ++ N +
Sbjct: 109 PEVDEKLLYDTFSAFGVI---LQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165
Query: 406 -LRDRELRLSHA 416
L +R + +S+A
Sbjct: 166 FLCNRAITVSYA 177
>gi|291396317|ref|XP_002714523.1| PREDICTED: zinc finger CCHC-type and RNA binding motif 1-like
[Oryctolagus cuniculus]
Length = 246
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 317 RACPPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHP 376
RA P +++ G AP K TV+V NLPF + + ++Y++F V V +++
Sbjct: 22 RAATPSEEMSGGLAP---SKSTVYVSNLPFSLTNNDLYRIFSKYG----KVVKVTIMKDK 74
Query: 377 HMRVGKGIAYVLFKTREAA-NLVIKRRNLKLRDRELRLSHAQQN 419
R KGIA++LF +++A N N +L R ++ S A N
Sbjct: 75 DTRKSKGIAFILFLDKDSAQNCTRAINNKQLFGRVIKASIAIDN 118
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 33/193 (17%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L KK L F KFGE+ I+ P N
Sbjct: 54 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRG 96
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 97 FGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGL 145
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+ +E+I + F + +EA+ + P +G ++ FK E V++++
Sbjct: 146 NPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFH 201
Query: 405 KLRDRELRLSHAQ 417
+ + + AQ
Sbjct: 202 TISGSKCEIKVAQ 214
>gi|295665859|ref|XP_002793480.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277774|gb|EEH33340.1| nucleolar protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 691
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 16/114 (14%)
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T+F+ NLPF DE +Y+ F L + RV+ P +G A+V F +E AN
Sbjct: 274 TIFIRNLPFTATDESLYEHFVQFGPLRYA----RVVFDPETDRPRGTAFVCFWDKENANS 329
Query: 398 VI----KRRNL-KLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTL 446
+ KR +L + D + + S + + ++KD P K+ +D R L
Sbjct: 330 CLRDAPKRTDLPRAEDAKAKTSAIKYSVLEDEKKD-------PSGKYTMDGRVL 376
>gi|242786497|ref|XP_002480817.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720964|gb|EED20383.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1268
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 41/237 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++V N P + + F GEI VR S + N
Sbjct: 906 TVYVTNFPPTADEAFIRSLFSVAGEIIEVRFPS------------------LKYNTHRRF 947
Query: 287 AYIVFKSEQSTEAALAFNMAVIG-GNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ FKS AA + V+G G ++++ + P ++ + P+Y+ ++ + V N+
Sbjct: 948 CYVQFKSADEAIAATKLDNKVVGDGLNLQVKISDPSARQDR--HGPIYE-EREIHVSNIH 1004
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTREAANLVIKRRN 403
FD ++ ++ +LF +E+ +R P G +G +++F +E A +
Sbjct: 1005 FDARENDLKELFSRYGTIET-------VRIPSKVNGEHRGFGFIVFSKKEEATAALAMHK 1057
Query: 404 LKLRDRELR--------LSHAQQNCTPSKRKDVAPAVNSPPKKFVLD--SRTLGSGN 450
+ R R L+ + A TP R + A NS ++ D +RTLG N
Sbjct: 1058 QEFRGRPLQVKVSTPAPVKRAATVITPKARSESAEPTNSEGQRAADDRAARTLGLMN 1114
>gi|403355446|gb|EJY77299.1| FHA domain containing protein [Oxytricha trifallax]
Length = 628
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 338 TVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
T++V NLPF V D+++ LF CG + ++R+ + + G+G A++ +AA
Sbjct: 382 TIYVSNLPFSVTDKDLQDLFGDCG------KILSIRMPLNNQTKQGRGFAFITMADEKAA 435
Query: 396 NLVIKRRNLKLRDRELRLSHAQ 417
+ K DR LR+S A+
Sbjct: 436 RRALNYDGHKFYDRRLRVSQAE 457
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 16/202 (7%)
Query: 221 EGKLLRT---IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQ 277
+G L R +FV LP+ V L ++F FGE+ ++ + D K R
Sbjct: 3 DGNLWRDRNKVFVAGLPVHVDDNALYEKFKPFGEMHQSKV----VYDQKTGRSRGFGFVT 58
Query: 278 INENADSVHAYIVFKSEQSTEAALAFNMAVI---GGNHIRLDRACPPRKKLKGEDAPLYD 334
E +++ A V + QS N+ + G+ + A K+ P +
Sbjct: 59 FCEYTNALDA--VDQLNQSKWEKRTLNVRFLQPKNGSDAGGNGAAAIAKRPTKVIGPRPE 116
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
T++VGNL +D+ +E + ++F D S+ AVR H + +G YV F
Sbjct: 117 GCTTIYVGNLAYDITEEVLRKVF----DKCGSIRAVRFAEHIQTKEFRGFGYVQFHEEGP 172
Query: 395 ANLVIKRRNLKLRDRELRLSHA 416
+K + + R + + +
Sbjct: 173 CEAAVKLDGMVVMGRPMSIDYG 194
>gi|195998405|ref|XP_002109071.1| hypothetical protein TRIADDRAFT_35408 [Trichoplax adhaerens]
gi|190589847|gb|EDV29869.1| hypothetical protein TRIADDRAFT_35408, partial [Trichoplax
adhaerens]
Length = 216
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
+ TV+V NLPF + + +I++LFC + V ++++ R KG+A++LF R +A
Sbjct: 9 RSTVYVSNLPFSMTNNDIHKLFCK----HGKIVKVTIMKNKETRESKGVAFILFLERPSA 64
Query: 396 NLVIKR-RNLKLRDRELRLSHAQQN 419
++ N ++ R ++ S A N
Sbjct: 65 LAAVEALNNTEVIGRTIKCSIAHDN 89
>gi|396082305|gb|AFN83915.1| polyadenylate-binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 415
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFV NLP K L F FGEI S ++ + P + +
Sbjct: 13 IFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTP------------------QGKSKGYG 54
Query: 288 YIVFKSEQSTEAALA----FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGN 343
++ FK +++ + + N ++GGN I ++ P K KGE + + F+ N
Sbjct: 55 FVQFKEKKAAKKVIKNFNNLNGLMLGGNKIAVELYNPDMK--KGESKKVSTMFTNCFIKN 112
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
P D ++E+ +L + S ++ P KG A+ F++ E+A
Sbjct: 113 FPVDTTEKELLELLVRYGKVTSLYFPIKDDGKP-----KGFAFANFESHESA 159
>gi|157822711|ref|NP_001101320.1| RNA-binding protein 28 [Rattus norvegicus]
gi|149065129|gb|EDM15205.1| RNA binding motif protein 28 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 700
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E + ++ DL+ VR++ HP KG A+ F T+EAA
Sbjct: 329 KTVFIRNLSFDSEEEALGEVLQQFGDLK----YVRIVLHPDTEHSKGCAFAQFVTQEAAQ 384
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 385 KCLAAASPETEGGGLKLDGRQLKVDLA 411
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 30/189 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
RT++VGNL V ++ L F + G + +I I E +
Sbjct: 8 RTLYVGNLDTSVSEELLCALFSQIGAVKGCKI--------------------IREPGNDP 47
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+A++ F + Q AL A N ++++ A P + K + + + I FVG+L
Sbjct: 48 YAFVEFTNHQCAATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHI----FVGDL 103
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
+++ + + + F ++ + R++R P KG A+V F + A I N
Sbjct: 104 SPEIETQTLKEAFAPFGEISN----CRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNG 159
Query: 405 K-LRDRELR 412
+ L R +R
Sbjct: 160 QWLGSRSIR 168
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 53/226 (23%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVG+L +++ +TL + F FGEI + RI P + KG +A
Sbjct: 98 IFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDP---QTMKSKG--------------YA 140
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRAC------------------PPRKKLKGE 328
++ F + EAA+ A N +G IR + + P +++ +
Sbjct: 141 FVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQ 200
Query: 329 DAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVL 388
+P TV+ G + D+ I + F +++ +RV + KG A++
Sbjct: 201 SSP---TNCTVYCGGFTNGITDDLITKTFSPF----GTIQDIRVFKD------KGYAFIK 247
Query: 389 FKTREAANLVIK-RRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVN 433
F T+EAA I+ N ++ ++ ++N P+ V P N
Sbjct: 248 FTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPN---SVGPNAN 290
>gi|426344797|ref|XP_004038940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Gorilla gorilla gorilla]
Length = 363
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 78/196 (39%), Gaps = 14/196 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+F+GNL V ++ L EF +FGE+ VRI + D R + AD+ A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRI----VTDRDSGRSRGFGYVEFTNAADAAKA 288
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
+ K + L + A N +RA + + +P D T+F+GN+ F
Sbjct: 289 HAAKKDAELDGRKLNVDFANGRSNAAPKERAQSRAQNFGDQTSPESD---TLFIGNIAFS 345
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN---L 404
+ I + F S+ VR+ P KG YV F + + A + N L
Sbjct: 346 ANENMISEAFA----EHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADL 401
Query: 405 KLRDRELRLSHAQQNC 420
R L S +QN
Sbjct: 402 GGRSMRLDFSSPRQNS 417
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 90/237 (37%), Gaps = 39/237 (16%)
Query: 197 EKRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
+KRK D+E ++ +K + EG +FVGNL V ++ L EF +FGE+ VR
Sbjct: 235 QKRKAEDDE--ELAAPKKTKVESSEGG---NLFVGNLSWNVDEEWLRSEFEEFGELSGVR 289
Query: 257 IRSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAV-IGGNHIRL 315
I + D R Y+ F A A V + G + +
Sbjct: 290 I----VTDRDSGRSRGF-------------GYVEFVDAADAAKAHAAKKDVELDGRKLNI 332
Query: 316 DRA-----CPPRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEIYQLFCGLNDLESS 366
D A PR++ + D T+F+GN+ F + I + F S
Sbjct: 333 DFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFS----EHGS 388
Query: 367 VEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN---LKLRDRELRLSHAQQNC 420
+ VR+ P KG YV F + + A + N L R L S +QN
Sbjct: 389 ILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQNS 445
>gi|326430602|gb|EGD76172.1| splicing factor 3b [Salpingoeca sp. ATCC 50818]
Length = 256
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T++VG L + + L + F + G P++ +P+ Q +
Sbjct: 13 TVYVGGLDDRATESLLWELFQQAG----------PVVSVHMPKDRVTGLHQ-------GY 55
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
++ F E+ E AL NM + G IR+++A + D+ +++GNL
Sbjct: 56 GFVEFLGEEDAEYALKIMNMINLYGKPIRVNKAASHTRTQ--------DVGANLYIGNLD 107
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
V ++ +Y F + ++ +++R P KG A+V + EA++ IK N +
Sbjct: 108 PSVDEKLLYDTFSAFGVI---LQHPKIMRDPDTGASKGYAFVNYANFEASDAAIKAMNGQ 164
Query: 406 -LRDRELRLSHAQQNCTPSKRKDVA 429
L +R + +++A + T +R A
Sbjct: 165 YLCNRNINVTYAFKKDTKGERHGSA 189
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 27/199 (13%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
D++GK IFVG L T++K F ++GE+ ID ++ K
Sbjct: 5 DEKGK----IFVGGLSWDTTHATMLKYFSRYGEV----------ID-------CVVMKNP 43
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
++ FK + LA V+ I + C PR KG + + K+
Sbjct: 44 QTGKSRGFGFVTFKDPSCVKTVLANQPHVLDSRQID-PKQCNPRSMNKGGKS-AENSKRK 101
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VF+G LP ++ ++EI + F +++ + V ++ R +G ++ F E+ V
Sbjct: 102 VFMGGLPSNITEDEIKEHFAEFGEVQ---DVVIMVDQDKERS-RGFGFLTFDCEESVEKV 157
Query: 399 IKRRNLKLRDRELRLSHAQ 417
I + + ++ +++ AQ
Sbjct: 158 ISQHYVPVKGKQVECKRAQ 176
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+ +E+I + F + +EA+ + P + +G ++ FK E V++++ +
Sbjct: 93 EATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTI 148
Query: 407 RDRELRLSHAQ 417
+ + AQ
Sbjct: 149 SGSKCEIKVAQ 159
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++E++ +L DL + VR++ HP KG A+ F T+ AA
Sbjct: 339 KTVFIRNLSFDSEEEDLGELLQQFGDL----KYVRIVLHPDTEHSKGCAFAQFMTQGAAQ 394
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 395 KCLAAASPETEGGGLKLDGRQLKVDLA 421
>gi|312372057|gb|EFR20104.1| hypothetical protein AND_20653 [Anopheles darlingi]
Length = 553
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+TVFV NLPFDV+ EE+ +L VE V + R P KG A+V+F+ +++A
Sbjct: 123 RTVFVKNLPFDVEVEELKELMSQF----GIVEQVLINREPISGHSKGSAFVIFRLKDSAQ 178
Query: 397 LVIKRRNLKLR 407
+ R++LKL+
Sbjct: 179 MSC-RQSLKLQ 188
>gi|350535755|ref|NP_001233020.1| uncharacterized protein LOC100167805 [Acyrthosiphon pisum]
gi|239788448|dbj|BAH70906.1| ACYPI008564 [Acyrthosiphon pisum]
Length = 290
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 41/178 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R IFVG L + +K L + F +FGEI+++ ++ +D R
Sbjct: 49 RKIFVGGLKGETTEKDLSEHFGQFGEIENINVK----VDAATGRARGF------------ 92
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IV+K+ + + ALA NH+ D+ P+K A +K +FVG L
Sbjct: 93 -AFIVYKTMEGLDNALACT------NHVINDKKIDPKK------AKARHVK--LFVGGLS 137
Query: 346 FDVKDEEI---YQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
D+ D++I ++ + L + E + V+ R KG +V F +A ++K
Sbjct: 138 PDLTDDDIKDYFKRYAPLVNAEMPYDKVKNQR-------KGFCFVTFDCMQAVTEILK 188
>gi|395834189|ref|XP_003790094.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Otolemur garnettii]
Length = 363
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|198423973|ref|XP_002124618.1| PREDICTED: similar to bol, boule-like (Drosophila) [Ciona
intestinalis]
Length = 387
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
I +FVG + F K+E++ + FC V+ ++IR V KG +V F+T E
Sbjct: 58 IPNRIFVGGIDFKTKEEDLQKFFCNYG----MVKDTKIIRD-RADVSKGYGFVTFETSEE 112
Query: 395 ANLVIKRRN-LKLRDRELRLSHA---QQNCTPSKRKDVAPAVNSPPKKFVLDSRTLGSGN 450
A+ V + + L L ++L + A QQ C P KD+ V PP +V+ S
Sbjct: 113 ADRVRDQEDCLYLNGKKLNIGQAIRKQQICFP---KDI--HVPGPPGSWVMHPAGYASFT 167
Query: 451 RSN 453
SN
Sbjct: 168 NSN 170
>gi|345566791|gb|EGX49733.1| hypothetical protein AOL_s00078g222 [Arthrobotrys oligospora ATCC
24927]
Length = 303
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 26/137 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
I+VGN+ ++ + L +EF +FG++ S ++ + D + KG
Sbjct: 114 IYVGNISYGIRGEDLEREFGEFGKVVSAKV----VYDPRGLSKG--------------FG 155
Query: 288 YIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKK--LKGE-DAPLYDIKKTVFVGN 343
Y+ ++ + + AA+ + ++ G I + P ++ GE +AP +T+F+GN
Sbjct: 156 YVEYEEQDAATAAVQKMHGLIVDGRRINVQYVLRPDREGPTNGESNAP----SRTLFIGN 211
Query: 344 LPFDVKDEEIYQLFCGL 360
L FD+ D+++ +LF G+
Sbjct: 212 LSFDITDKDLNELFAGV 228
>gi|302696625|ref|XP_003037991.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
gi|300111688|gb|EFJ03089.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
Length = 449
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 57/240 (23%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
D K +++VGN+ K + L F + GE+ + + + P R G ++
Sbjct: 93 DQPTKRQNSVWVGNMSFKTTQDDLRSFFKEAGEVTRINMPTKPSG-----RPGGSIE--- 144
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL-------DRACPP---------- 321
+ +AY+ F + ++ AA+A + + G + + R PP
Sbjct: 145 ----NKGYAYVDFATPEAKAAAIALSEHPLIGRKLLIKDGDDFAGRPAPPGQDPTQLTAK 200
Query: 322 ------RKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLF------------------ 357
R+ L + P T+FVGNL F+ E++ Q+F
Sbjct: 201 THSKTARRILNSQKQPPA---PTLFVGNLSFETTVEDLQQMFESHRPAKDKAKKSEVKTE 257
Query: 358 CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE-AANLVIKRRNLKLRDRELRLSHA 416
G + + VR+ KG A++ F T+E A +I RN L R+L++ A
Sbjct: 258 SGAEPPQPWLRKVRMATFEDTGKCKGFAFIDFGTKEYAEEALINPRNHHLNGRDLQVEFA 317
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 37/231 (16%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KA E E +K + +D + +T+FVG L V + L +EF +++ R+
Sbjct: 227 KKRKA--EEEAPAFSKKAKANEDGSEESKTLFVGQLSWNVDEDWLRREFEDVATVENARV 284
Query: 258 RSVPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNM-AVIGGNHIRLD 316
+ D + R I Y+ F + E ALA A I G I LD
Sbjct: 285 ----VWDNQRNRSKGI-------------GYVDFATRADAEKALAEKQGAEIDGRPINLD 327
Query: 317 RACPPR---------KKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSV 367
+ +K ++P D T+FVGNL F+ DEE L +++ V
Sbjct: 328 FTTARQNNNNSQDRARKFGDSESPPSD---TLFVGNLSFNA-DEEA--LGAAMSE-HGEV 380
Query: 368 EAVRVIRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLKLRDRELRLSHAQ 417
+VR+ KG AYV F T EA ++ R +R ++Q
Sbjct: 381 TSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAHAAMNGQQVCGRSIRTDYSQ 431
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 38/201 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 66 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 104
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 105 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 153
Query: 338 TVFVGNL-PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+FVG L P +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 154 KIFVGGLNPESPTEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVK 209
Query: 397 LVIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 210 KVLEKKFHTVSGSKCEIKVAQ 230
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|350540024|ref|NP_001232117.1| heterogeneous nuclear ribonucleoprotein D-like [Taeniopygia
guttata]
gi|197129483|gb|ACH45981.1| putative heterogeneous nuclear ribonucleoprotein D-like variant 1
[Taeniopygia guttata]
Length = 301
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 34/198 (17%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 28 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 67
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S E L + G I RA K LKG++ P K V
Sbjct: 68 -GRSRGFGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 117
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVG L D +E+I + F ++E+ + + +G ++ + E ++
Sbjct: 118 FVGGLSPDTSEEQIKEYFGAFGEIEN----IELPMDTKTNXRRGFCFITYTDEEPVKKLL 173
Query: 400 KRRNLKLRDRELRLSHAQ 417
+ R ++ + + AQ
Sbjct: 174 ESRYHQIGSGKCEIKVAQ 191
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 38/199 (19%)
Query: 222 GKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINEN 281
G L +++VG+L V + L ++F G I S+R+ + I ++ +
Sbjct: 7 GYPLASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVC-----------RDIITRRSLG-- 53
Query: 282 ADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRL---DRACPPRKKLKGEDAPLYDIKK 337
+AYI F+ E AL N VI G IR+ R RK G
Sbjct: 54 ----YAYINFQQPADAECALDTMNYDVIKGRPIRIMWSQRDPALRKSGVGN--------- 100
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+F+ N+ + ++ +Y F ++ S +V+ R KG +V F+T+EAAN
Sbjct: 101 -IFIKNIDDSIDNKALYDTFSAFGNILSC----KVVCDE--RGSKGYGFVHFETQEAANR 153
Query: 398 VIKRRN-LKLRDRELRLSH 415
I+ N + L DR++ + H
Sbjct: 154 AIETMNGMLLNDRKVFVGH 172
>gi|367002824|ref|XP_003686146.1| hypothetical protein TPHA_0F02310 [Tetrapisispora phaffii CBS 4417]
gi|357524446|emb|CCE63712.1| hypothetical protein TPHA_0F02310 [Tetrapisispora phaffii CBS 4417]
Length = 400
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 52/215 (24%)
Query: 228 IFVGNLPLKVKKKTLIKEFI----------KFGEIDSVRIRSVPIIDT---KIPRKGAIL 274
+++GN+ K+ +IK + + E D VR ++P+ + KI KG
Sbjct: 123 VWMGNMAFDTTKEDIIKYLVLKTKTLEGPSQITETDMVRF-NMPLAKSDGKKIKNKG--- 178
Query: 275 QKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRL----DRACPPRKKLKGEDA 330
YI FK+ + E+A+A + + G + + D A P K +
Sbjct: 179 -----------FCYIDFKTLEQMESAIALSETELNGRKLLIKSSTDYAGRPDK------S 221
Query: 331 PLYDIKKT-----VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKG 383
L + K +FVGNL FD DE + + F CG + +R+ KG
Sbjct: 222 DLVSMSKNPPSRILFVGNLSFDTTDELLRKHFQHCG------DIVKIRMATFQDSGKCKG 275
Query: 384 IAYVLFKTREAANLVIKRRNL-KLRDRELRLSHAQ 417
A+V FK E A + ++ K+ R LR+ +
Sbjct: 276 FAFVDFKNEEGATKALSDKSCRKIAGRPLRMEFGE 310
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 33/179 (18%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
LR +FVG L KK L F KFGE+ I+ P N
Sbjct: 119 LRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSR 161
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGN 343
+I+FK S E V+ RLD R P+K + + P+ K +FVG
Sbjct: 162 GFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGG 210
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
L + +E+I + F + +EA+ + P +G ++ FK E V++++
Sbjct: 211 LNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKK 265
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 201 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 240
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 241 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 290
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 291 FVGGLSPDTSEEQIKEYFGAFGEIE 315
>gi|209882003|ref|XP_002142439.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558045|gb|EEA08090.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 1078
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 14/80 (17%)
Query: 339 VFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
V+ GNLP+ +EE+ +LF CG S+E V V+ + KG A++ FKT E A
Sbjct: 882 VYCGNLPYSCTEEEVRELFAECG------SMERVSVLEN------KGCAFITFKTEEGAK 929
Query: 397 LVIKRRNLKLRDRELRLSHA 416
++ + + R LR++ +
Sbjct: 930 SAMEWNRTEYKGRMLRINMS 949
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
T+FVGNL + V D +Y+ F V RV+ +G YV F+T EAA
Sbjct: 289 TLFVGNLGWGVDDNALYEEFQN----NEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEK 344
Query: 398 VIKRRNLK-LRDRELRLSHAQQ---NCTPSKR 425
+N L+ RE+RL A + + TP+ R
Sbjct: 345 AYNDKNGAFLQGREMRLDFAAKPSADSTPNAR 376
>gi|393238609|gb|EJD46145.1| hypothetical protein AURDEDRAFT_113809 [Auricularia delicata
TFB-10046 SS5]
Length = 312
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++GNL +V + + ++ G P+++ +P+ + Q +
Sbjct: 13 TVYLGNLDERVTDAIVWELMLQAG----------PVVNVHLPKDRISMSHQ-------GY 55
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ F +E+ E A N + G IR+++A +K+L D+ +F+GNL
Sbjct: 56 GFCEFLTEEDAEYACKIMNQIKLWGKPIRVNKASSDKKQL--------DVGANLFIGNLD 107
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
+V + +Y F L + ++ R P KG ++ + E+++ I+ N +
Sbjct: 108 ENVDERLLYDTFTAFGLLSAPA---KIARDPQTMASKGYGFISYADFESSDAAIENMNGQ 164
Query: 406 -LRDRELRLSHA-------QQNCTPSKRKDVAPA 431
L ++ + + +A +++ TP++R A A
Sbjct: 165 YLMNKPITVQYAFKKDGKGERHGTPAERLLAAQA 198
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
TIFVG L + + L EF G + S R+ I ++ + + +
Sbjct: 188 TIFVGRLSWSIDDEWLKNEFDHIGGVVSARV---------------IYERGTDRSRG--Y 230
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDR-----ACPPR--KKLKGEDAPLYDIKKT 338
Y+ F+ + E A+ + I G I D A PR + K D P + +T
Sbjct: 231 GYVDFEDKSYAEKAVKEMHGKEIDGRPINCDLSTSKPAGNPRDDRAKKFGDLPS-EPSET 289
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+F+GNL F+ + IY++F ++ S VR+ HP KG YV + + A
Sbjct: 290 LFLGNLSFNADRDNIYEMFSKFGEIVS----VRIPTHPETEQPKGFGYVQYGNVDDAKKA 345
Query: 399 IKRRNLKLRD-RELRLSHA 416
+ + D R +RL ++
Sbjct: 346 LDALQGEYIDNRPVRLDYS 364
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 29/197 (14%)
Query: 225 LRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
L +F+ NL + K L+ F FG I S ++ + +EN
Sbjct: 132 LGNVFIKNLDKTIDNKALLDTFSAFGNILSCKVVT-------------------DENGSK 172
Query: 285 VHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLK-GEDAPLYDIKKTVFVG 342
+ ++ ++++++ E A+A N VI G + + P +++++ GE + VFV
Sbjct: 173 GYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKERVELGEGVTKF---TNVFVK 229
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NLP D D + +F + S V +++ KG +V ++ E A +
Sbjct: 230 NLPEDTTDAALNDMFSKFGKITSVV----IMKSSDDDKSKGFGFVCYEKVEDAQAAVNAL 285
Query: 403 N-LKLRDRELRLSHAQQ 418
N +L + L ++ AQ+
Sbjct: 286 NGTELAGKTLFVARAQK 302
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
Length = 125
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K TV+V NL F + + ++Y +F + V V V++ R KG+A++LF RE A
Sbjct: 9 KSTVYVSNLDFSLTNSDLYTIFSKMG----KVGKVTVMKDRVTRQSKGVAFILFTAREDA 64
Query: 396 NLVIKRRN-LKLRDRELRLSHAQQN 419
+K + + L R L++S AQ N
Sbjct: 65 EKAVKAMDGVVLNKRTLKVSIAQDN 89
>gi|398409430|ref|XP_003856180.1| hypothetical protein MYCGRDRAFT_31509 [Zymoseptoria tritici IPO323]
gi|339476065|gb|EGP91156.1| hypothetical protein MYCGRDRAFT_31509 [Zymoseptoria tritici IPO323]
Length = 427
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 41/190 (21%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPI-IDTKIPRKGAILQKQINENADSVH 286
I++GNLP V +++L + F+ G I S I + + ++ + KG
Sbjct: 93 IWIGNLPYSVNRESLQEFFLNAGGIGSTDIMRINMPLNERKQNKG--------------F 138
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIK---------- 336
AY+ F S E ALA + ++ G RAC + E P +
Sbjct: 139 AYVDFTSPAVLEIALALSEKLVNG------RACLIKNANSFEGRPKVSTEAKAADAAAKA 192
Query: 337 ------KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
K VFVGNL F+ +EI + F VE V + KG +V F
Sbjct: 193 AGKEPTKRVFVGNLGFEATRDEINEHFSQA----GQVEDVFLATFEDSGKCKGFGWVTFA 248
Query: 391 TREAANLVIK 400
E+A+ ++
Sbjct: 249 DIESASQAVR 258
>gi|156032453|ref|XP_001585064.1| hypothetical protein SS1G_13924 [Sclerotinia sclerotiorum 1980]
gi|154699326|gb|EDN99064.1| hypothetical protein SS1G_13924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 494
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Query: 198 KRKKADNETEDMLVHRK-EEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVR 256
K++KA+NE E K EE D+G + +FVGNL + + L +EF +FGEI R
Sbjct: 242 KKRKAENEPEPSAKKTKTEETAADDGSP-KNLFVGNLSWNIDDEWLYREFEEFGEITGAR 300
Query: 257 IRSVPIIDTKIPR-KGAILQKQINENADSVHAYIVF-KSEQSTEAALAFNMAVIGGNHIR 314
+ I D R KG Y+ F KS + A A A+I G
Sbjct: 301 V----ISDKNTGRSKG--------------FGYVEFAKSADAAAALAAKKGALIDGREAN 342
Query: 315 LDRACP-----PRKKLKGEDAPLYDIKK----TVFVGNLPFDVKDEEI-YQLFCGLNDLE 364
+D + P P+ + A D K T+F+GNL FD + Y F + D
Sbjct: 343 VDFSTPRENVAPKDRANNRAAQFGDAKNPPSDTLFLGNLSFDADENGFGYVTFGSVEDAT 402
Query: 365 SSVEAV 370
++ +A+
Sbjct: 403 AAYDAM 408
>gi|410918793|ref|XP_003972869.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Takifugu rubripes]
Length = 216
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K TV+V NLPF + + ++++LF V V +++ R KG+A+VLF RE+A
Sbjct: 9 KSTVYVSNLPFSLTNNDLHKLFTKYG----KVVKVTIVKDKDTRRSKGVAFVLFLDRESA 64
Query: 396 -NLVIKRRNLKLRDRELRLSHAQQN 419
N V N +L R ++ S A N
Sbjct: 65 RNCVRAINNKQLFSRTVKASIAIDN 89
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 38/186 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 65 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 104 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 152
Query: 338 TVFVGNL-PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+FVG L P +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVK 208
Query: 397 LVIKRR 402
V++++
Sbjct: 209 KVLEKK 214
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|451849890|gb|EMD63193.1| hypothetical protein COCSADRAFT_38066 [Cochliobolus sativus ND90Pr]
Length = 326
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
+++GNL +V L + F +FG+I+S++I + D + +G
Sbjct: 137 VLYIGNLYYEVTPDQLKRVFSRFGDIESIKI----VYDNRGLSRG--------------F 178
Query: 287 AYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKG------EDAPLYDIKKTV 339
AY+ +K+ +AA+ +M V G ++ + P + KG E P KT+
Sbjct: 179 AYVEYKNVSDAQAAIDNLDMQVFEGRNLVVQFHAPKYQPAKGRGPNGNEPNP---PSKTL 235
Query: 340 FVGNLPFDVKDEEIYQLFCGL-NDLESSVEAVRVIRHPHMRVGKGIAYVLF 389
F+GN+ F++ D+++ LF + N L+ V R P +G A+ F
Sbjct: 236 FIGNMSFEMSDKDLNDLFRDIRNVLDVRVAIDRRTGQP-----RGFAHADF 281
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 34/198 (17%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ T R
Sbjct: 28 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPV--TGRSRG--------- 72
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S E L + G I RA K LKG++ P K V
Sbjct: 73 ------FGFVLFKDAASVEKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 117
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
FVG L D +E+I + F ++E+ + + +G ++ + E ++
Sbjct: 118 FVGGLSPDTSEEQIKEYFGAFGEIEN----IELPMDTKTNERRGFCFITYTDEEPVKKLL 173
Query: 400 KRRNLKLRDRELRLSHAQ 417
+ R ++ + + AQ
Sbjct: 174 ESRYHQIGSGKCEIKVAQ 191
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 38/186 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 65 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 103
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 104 NTGRSRGFGFILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 152
Query: 338 TVFVGNL-PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
+FVG L P +E+I + F + +EA+ + P + +G ++ FK E
Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVK 208
Query: 397 LVIKRR 402
V++++
Sbjct: 209 KVLEKK 214
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 35/210 (16%)
Query: 221 EGKLLR--TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
EG++ R +I+VG++P + L + F K G+I +V IPRK + K
Sbjct: 12 EGQIGRQNSIYVGDIPTSTTESDLFQIFSKVGQIYTVI----------IPRKELSIVK-- 59
Query: 279 NENADSVHAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKK 337
D +AY+ F E S A+ FN + G+ IR+ P K ++ + + +
Sbjct: 60 ----DKCYAYVTFFDEASVPTAIETFNFYELNGSQIRV----MPLDK----ESVVNNREG 107
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+ + NLP + ++ +Y F + + + +V+++ + GI Y+ +K + A +
Sbjct: 108 NIVIKNLPKETDNQTLYDTFI----IFGPIVSCKVVKN-SLSECSGIGYIQYKDPKIAEV 162
Query: 398 VIKRRNLKLRDRELRLSHAQQNCTPSKRKD 427
I+ N K+ +L Q C P+ +++
Sbjct: 163 AIQMIN-KIMLNGKKLCAVQ--CVPNDKRE 189
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 37/200 (18%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 67 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP----------------- 105
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E V+ RLD R P+K + + P+ K
Sbjct: 106 NTGRSRGFGFILFKDATSVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----K 154
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ +K E
Sbjct: 155 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKSNKRRGFVFITYKEEEPVKK 210
Query: 398 VIKRRNLKLRDRELRLSHAQ 417
V++++ + + + AQ
Sbjct: 211 VLEKKFHTVSGSKCEIKVAQ 230
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
Y+ F SE+ A+ N + G ++LD P K+ ED D + T+FV NLP
Sbjct: 246 FGYVDFASEEDMHKAMELNGKKVMGQELKLDM--PRSKETAQEDKKERDTR-TLFVKNLP 302
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVLFKTR-EAANLVIKRR 402
+ +E+ ++F E +V+ IR P + G +GIAY+ FKT EA ++ + +
Sbjct: 303 YSATADELKEVF------EDAVD----IRVPQGQNGNNRGIAYIEFKTEAEAEKMLEEAQ 352
Query: 403 NLKLRDRELRL 413
++ R + +
Sbjct: 353 GADVQGRSIMV 363
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+ +E+I + F + +EA+ + P + +G ++ FK E V++++ +
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTI 148
Query: 407 RDRELRLSHAQQ 418
+++++ ++
Sbjct: 149 SGSKIKVAQPKE 160
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAP-LYDIKKTVFVGNLP 345
A I FK+E + + ALA + A +GG +++ R + AP + + ++VGNLP
Sbjct: 226 AIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAPEMVEGYNRIYVGNLP 285
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+D+ ++E+ + F N V ++R + +G A+V F + + +K
Sbjct: 286 WDITEDEVRKFFSRCN-----VSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALK 335
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 35/191 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + +K L F KFGEI+S+ +++ P + R
Sbjct: 55 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDP----QTGRSRGF------------ 98
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +TEA + A G HI + P KK K +FVG L
Sbjct: 99 -AFIVFT---NTEAIDKVSSA---GEHIINSKKVDP-KKAKARHGK-------IFVGGLT 143
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ DEEI F ++ VE V + KG ++ F + + ++K K
Sbjct: 144 TEISDEEIKTYFSQFGNI---VE-VEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQK 199
Query: 406 LRDRELRLSHA 416
+ +E+ + A
Sbjct: 200 ISGKEVDVKRA 210
>gi|156102134|ref|XP_001616760.1| spliceosome-associated protein 49 [Plasmodium vivax Sal-1]
gi|148805634|gb|EDL47033.1| spliceosome-associated protein 49, putative [Plasmodium vivax]
Length = 479
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 107/237 (45%), Gaps = 46/237 (19%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+++ NL +V ++ L + F++ G + +V I PR + + H
Sbjct: 21 TLYIANLDAQVDEEILCELFMQCGNVKNVHI----------PR----------DKINGFH 60
Query: 287 AYIVF----KSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVG 342
A F + A NM + G +R ++A +D +D+ +F+G
Sbjct: 61 AGYGFVEYEYEYECEYAGKVLNMTKLFGKPLRCNKAS--------QDKRSFDVGANLFIG 112
Query: 343 NLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
NL +V ++ ++ +F L + VR+IR + KG ++ + E++++ I+
Sbjct: 113 NLDAEVDEKMLFDIFSSFGQLVT----VRIIRDEN-DTSKGHGFISYDNFESSDMAIENM 167
Query: 403 NLK-LRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLG--SGNRSNSKV 456
N + + ++++ +S+A + + +R A ++F+ ++ L SGN S++ V
Sbjct: 168 NNQFICNKKVHISYAFKKDSKGERHGTA------AERFIAANKALSSYSGNESSNHV 218
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|154308771|ref|XP_001553721.1| hypothetical protein BC1G_07808 [Botryotinia fuckeliana B05.10]
gi|347831781|emb|CCD47478.1| hypothetical protein [Botryotinia fuckeliana]
Length = 381
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 24/131 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNL + ++ L KEF FG I VR+ D + KG A
Sbjct: 167 VYIGNLLFDINEEDLKKEFEHFGTITDVRVTR----DARGLSKG--------------FA 208
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
YI F QS AA+ A N + G + ++ K++ ++ P K +F+GNL F
Sbjct: 209 YIDFADVQSATAAIEAKNQTIFEGRRLVVN-YINQTPKIRDQNPP----SKCLFIGNLAF 263
Query: 347 DVKDEEIYQLF 357
++ D ++ LF
Sbjct: 264 EMSDADLNSLF 274
>gi|238859599|ref|NP_001155005.1| RNA-binding protein 34 isoform 2 [Homo sapiens]
gi|119590413|gb|EAW70007.1| RNA binding motif protein 34, isoform CRA_c [Homo sapiens]
Length = 225
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 149 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 208
Query: 250 GEIDSVRIRSV 260
G+I+SVR RS+
Sbjct: 209 GQIESVRFRSL 219
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 141 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 230
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 231 FVGGLSPDTSEEQIKEYFGAFGEIE 255
>gi|473943|dbj|BAA07503.1| KIAA0117 [Homo sapiens]
Length = 227
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 194 GVGEKRKKADNETEDMLV-HRKEEGFDDEGKLL---RTIFVGNLPLKVKKKTLIKEFIKF 249
GV +K ++TED +V RK+ + E + L RT+FVGNLP+ KK L F ++
Sbjct: 151 GVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEY 210
Query: 250 GEIDSVRIRSV 260
G+I+SVR RS+
Sbjct: 211 GQIESVRFRSL 221
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 37/187 (19%)
Query: 217 GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQK 276
G +D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 64 GEEDAGKM----FVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDP--------------- 104
Query: 277 QINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDI 335
N +I+FK + LA RLD R P+K + + P+
Sbjct: 105 --NTGRSRGFGFILFKEPSGVDKVLA-------QKEHRLDGRQIDPKKAMAMKKEPV--- 152
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K +FVG L + +E I + F ++E+ + + P +G ++ FK EA
Sbjct: 153 -KKIFVGGLNPETTEERIREYFGAFGEIET----IELPMDPKSNKRRGFVFITFKEEEAV 207
Query: 396 NLVIKRR 402
+++++
Sbjct: 208 KKILEKK 214
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 2 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 45 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 93
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+ +E+I + F + +EA+ + P + +G ++ FK E V++++ +
Sbjct: 94 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTI 149
Query: 407 RDRELRLSHAQ 417
+ + AQ
Sbjct: 150 SGSKCEIKVAQ 160
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
D KT+FVG LP+D + E+ + F D +E +RV+R KG A+VLF +
Sbjct: 104 DPFKTIFVGRLPYDTTEMELQREFSKFGD----IERIRVVRDKVTNKSKGYAFVLFTNPQ 159
Query: 394 AANLVIK----RRNLKLRDR 409
++ + K R L+++ R
Sbjct: 160 SSRMACKEIGIHRGLEIKGR 179
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVT---------------- 185
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 186 -GRSRGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|55960587|emb|CAI12647.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960979|emb|CAI12553.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
Length = 190
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 286 HAYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNL 344
+ ++ F SE+ + A+ NM + G IR+++A K L D+ +F+GNL
Sbjct: 13 YGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNL--------DVGANIFIGNL 64
Query: 345 PFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNL 404
++ ++ +Y F + ++ +++R P KG A++ F + +A++ I+ N
Sbjct: 65 DPEIDEKLLYDTFSAFGVI---LQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNG 121
Query: 405 K-LRDRELRLSHA 416
+ L +R + +S+A
Sbjct: 122 QYLCNRPITVSYA 134
>gi|444727649|gb|ELW68129.1| RNA-binding protein 34 [Tupaia chinensis]
Length = 234
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSV 260
RT+FVGNLP+ KKTL F ++G+++SVR RSV
Sbjct: 167 RTVFVGNLPVTCNKKTLKSFFKEYGQVESVRFRSV 201
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 33/208 (15%)
Query: 226 RTIFVGNLPLKVKKKTLIKEF-IKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADS 284
R++FV L ++ + L F K GE + R I+ +I R+ +
Sbjct: 268 RSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSR---IVTDRISRRSKGI---------- 314
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLK----------GEDAPLYD 334
Y+ F+S + + AL + V+ G I++ R +L G AP
Sbjct: 315 --GYVEFRSVELVDKALGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGG 372
Query: 335 IKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
++ ++VG+L F++ + +I Q+F +L E V + R P KG A+V +K E
Sbjct: 373 MQ--LYVGSLHFNLTESDIKQVFEPFGEL----EFVDLHRDPMTGRSKGYAFVQYKRAED 426
Query: 395 ANLVIKR-RNLKLRDRELRLSHAQQNCT 421
A + +++ +L R LR++ + T
Sbjct: 427 ARMALEQMEGFELAGRTLRVNTVHEKGT 454
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 43
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 44 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 92
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+ +E+I + F + +EA+ + P + +G ++ FK E V++++ +
Sbjct: 93 EATEEKIREYFGEFGE----IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTI 148
Query: 407 RDRELRLSHAQ 417
+ + AQ
Sbjct: 149 SGSKCEIKVAQ 159
>gi|146101305|ref|XP_001469083.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|398023353|ref|XP_003864838.1| RNA binding protein, putative [Leishmania donovani]
gi|134073452|emb|CAM72182.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|322503074|emb|CBZ38158.1| RNA binding protein, putative [Leishmania donovani]
Length = 197
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 333 YDIKKTVFVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFK 390
Y + ++F+GN+ ++ +E+++ F G+ D V+ VR++R KG YV F
Sbjct: 8 YPPETSIFLGNVAYNTTEEDVWSFFQEHGIAD----VKRVRLVRDRETGDCKGFGYVEFM 63
Query: 391 TREAANLVIKRRNLKLRDRELRLSHAQQN 419
+ I+ R KL RELR+ H ++
Sbjct: 64 HASSVQPAIETRGDKLNGRELRIVHVNKS 92
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 41/178 (23%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F +G+I+S+ +++ P N
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDP-----------------NTGRSRG 96
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +S + ++ N +I G + +A K +FVG L
Sbjct: 97 FAFIVFAKAESLDKIMSANDHIINGKKVDPKKAKARHGK--------------IFVGGLS 142
Query: 346 FDVKDEEIYQLFCGLN---DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
++ DE+I F D+E + + R KG ++ F++ + N ++K
Sbjct: 143 TELSDEDIKNFFSQFGTIVDVEMPFDKTKNQR-------KGFCFITFESEQVVNELLK 193
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|443900412|dbj|GAC77738.1| splicing factor 3b, subunit 4 [Pseudozyma antarctica T-34]
Length = 319
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T ++GNL + + + I+ G P+++ +P+ +I++ +
Sbjct: 64 TCYIGNLDERATDAIVWELMIQAG----------PLVNLHLPKD------RISQTHQG-Y 106
Query: 287 AYIVFKSEQSTEAAL-AFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+ F++EQ + A N + G IR+++A RK++ DI +FVG+L
Sbjct: 107 AFAEFQTEQDADYACKVMNGLKLYGKPIRVNKASNDRKQI--------DIGANLFVGSLD 158
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
V + +Y+ F ++ V +V R P KG A+V F + EAA+ ++ N
Sbjct: 159 PAVDEHLLYETFSAFGNI---VGLPKVARDPATGEPKGYAFVSFDSFEAADAAVEALN 213
>gi|399218847|emb|CCF75734.1| unnamed protein product [Babesia microti strain RI]
Length = 237
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 39/213 (18%)
Query: 231 GNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHAYIV 290
GNL +V ++ L + F + G + +V I PR Q Q + ++
Sbjct: 30 GNLDPQVDEEILWELFTQVGIVRNVHI----------PRDKVTNQHQ-------GYGFVE 72
Query: 291 FKSEQSTEAALA---FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPFD 347
F +E TEA A N + IR ++A +D Y+I +F+GNL D
Sbjct: 73 FDNE--TEADYAQKVMNALKVYHKPIRCNKAS--------QDKRTYEIGANLFIGNLDPD 122
Query: 348 VKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK-L 406
V ++ +Y F V + +++R +GKG +V F + ++++ + N + L
Sbjct: 123 VDEKLLYDTFSAF----GLVLSTKIVREEETGLGKGFGFVSFDSFDSSDAALASMNGQYL 178
Query: 407 RDRELRLSHAQQNCTPSKRKDVAP----AVNSP 435
+R +++S+A + T +R A A N P
Sbjct: 179 CNRPIQVSYAYKKDTTGERHGSAAERLLAANRP 211
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 36/196 (18%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
IFVGN+P +TL +F G I++ IP G ++ +A
Sbjct: 188 IFVGNIPFTTDAETLKAKFEAIG----------TIVNVSIPMSGKRMKG---------YA 228
Query: 288 YIVFKSEQSTEAAL-AFNMAVIGGNHIRLD-----RACPPRKKLKGEDAPLYDIKK--TV 339
+I F + E A+ N G ++++ A KK E+ + K TV
Sbjct: 229 FIKFSTRAEAEKAVKKLNDFDFDGRQLKVNFSSGKEAEKREKKTGDENGEKKEQTKSSTV 288
Query: 340 FVGNLPFDVKDEEIYQLF--CGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
F+GNL + ++ I +L CG ++ VR+ ++ KG A+V F+ E+A
Sbjct: 289 FIGNLSYSTNEQNIRKLLKDCG------EIKGVRIALGEDGKM-KGFAHVEFEDAESAEK 341
Query: 398 VIKRRNLKLRDRELRL 413
+K L R +++
Sbjct: 342 AMKFNGADLDGRNIKV 357
>gi|449279242|gb|EMC86877.1| Squamous cell carcinoma antigen recognized by T-cells 3, partial
[Columba livia]
Length = 875
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 42/257 (16%)
Query: 218 FDDEGKLLRTIFVGNLPLKVK--KKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQ 275
F D K T+FV NL + + L + F GE+ +R P+ K +G
Sbjct: 608 FHDSSKDSVTVFVSNLSYTMADPEAKLKELFESCGEVAQIR----PVFSNKGTFRG---- 659
Query: 276 KQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI 335
+ YI FK E+S AL + V+ G + + P K K D ++
Sbjct: 660 ----------YCYIEFKEEKSALQALGLDRRVVEGRPMFVS---PCVDKNKNPDFKVFRY 706
Query: 336 KKT-----VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVG--KGIAYVL 388
T +F+ LPF EE+ ++ C + +V+ +R++ + R G KG+AYV
Sbjct: 707 STTLEKHKLFISGLPFSCTKEELEEV-CKAH---GNVKDIRLVTN---RAGKPKGLAYVE 759
Query: 389 FKTR-EAANLVIKRRNLKLRDRELRLSHAQQNCTPSKRKDVAPAVNSPPKKFVLDSRTLG 447
F+ +A+ V+K L +++ ++++ + P ++ P P +F + + G
Sbjct: 760 FENEAQASQAVLKMDGLTVKEHVIKVAISN---PPLRKLPDKPEAGRAP-QFAVPRQVYG 815
Query: 448 SGNRSNSKVAMSYQGLQ 464
+ + ++++M + LQ
Sbjct: 816 ARGKGRTQLSMMPRALQ 832
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 34/199 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D+GK+ F+G L KK L +FGE+ I++ P+
Sbjct: 27 EDDGKM----FIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLT--------------- 67
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S + L + G I RA K +KG++ P K
Sbjct: 68 --GRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRA----KAIKGKEPP-----KK 116
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
VFVG L D+ +E++ + F + +E++ + +G +V F E +
Sbjct: 117 VFVGGLSPDITEEQLREYF----GVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKL 172
Query: 399 IKRRNLKLRDRELRLSHAQ 417
++ R ++ + + AQ
Sbjct: 173 LENRYHQIGSGKCEIKVAQ 191
>gi|351705745|gb|EHB08664.1| RNA-binding protein 28 [Heterocephalus glaber]
Length = 758
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 337 KTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAAN 396
KTVF+ NL FD ++EE+ +L L+ VR++ HP KG A+ F T+EA
Sbjct: 334 KTVFIRNLSFDSEEEEVGELLQQFGALKY----VRIVLHPDTEHSKGCAFAQFMTQEATQ 389
Query: 397 LVIKRRN-------LKLRDRELRLSHA 416
+ + LKL R+L++ A
Sbjct: 390 KCLAAASPETEGGGLKLNGRQLKVDLA 416
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 143 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 187
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 188 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 232
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 233 FVGGLSPDTSEEQIKEYFGAFGEIEN 258
>gi|67471742|ref|XP_651783.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|56468563|gb|EAL46397.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|449709038|gb|EMD48384.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 306
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 210 LVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPR 269
LV R E D+ +F+ NLP + ++ L + F KFG ++ + +I T
Sbjct: 103 LVKRTNEVTDN------MLFIKNLPFAITEEKLKEMFSKFGVVE------ITLIKTH--- 147
Query: 270 KGAILQKQINENADSVHAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRA---CPPRKKL 325
+K+ N ++ A+I K+ + + A+A N + G I + A ++
Sbjct: 148 -----RKKGNVTKNNGIAFITVKTAEEQKKAIAEMNNFEVEGRKITVAAAYKKVENKQTT 202
Query: 326 KGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRH---PHMRVGK 382
K + P + VFV NLPF + DE +LF + +E+++ V RH ++ K
Sbjct: 203 KKTNEPKSLSETNVFVKNLPFTLTDEGFKKLFEKYDVVEATI----VKRHNKKLNVDRSK 258
Query: 383 GIAYVLFKTREAANLVIKRR-NLKLRDRELRLSHAQQNC 420
G +V FKT E I N ++ R++ ++ A Q
Sbjct: 259 GYGFVTFKTAEQQKKAIAEMDNFEVEGRKITVTSAYQRA 297
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 14/189 (7%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVGNL V ++ L EF +FGE+ RI + D + R + D+V A
Sbjct: 240 LFVGNLSWNVDEEWLRSEFEEFGELSGTRI----VTDRESGRSRGFGYVEFVNVEDAVKA 295
Query: 288 YIVFKSEQ--STEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
+ K + + L + A GN +RA K + +P D T+F+GN+
Sbjct: 296 HGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKSFGDQTSPESD---TLFIGNIS 352
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK-RRNL 404
F + + +LF +++ +R+ P KG YV F + + A ++
Sbjct: 353 FSADENMVQELFSKYG----TIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEHGA 408
Query: 405 KLRDRELRL 413
L R +RL
Sbjct: 409 DLGGRSIRL 417
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|189204223|ref|XP_001938447.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985546|gb|EDU51034.1| RNA binding domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 319
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
+ +++GNL +V L + F +FGE++SV+I + D + +G
Sbjct: 129 KMLYIGNLYYEVTADQLKRVFSRFGEVESVKI----VYDNRGLSRG-------------- 170
Query: 286 HAYIVFKSEQSTEAALA-FNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDI---KKTVFV 341
Y+ F + +AA+ +M V G ++ + P + + +D KT+F+
Sbjct: 171 FGYVEFANMADAQAAIDNLDMQVFEGRNMVVQYHQPKPNSMSRNASGSFDANAPSKTLFI 230
Query: 342 GNLPFDVKDEEIYQLF 357
GN+ F++ D+++ LF
Sbjct: 231 GNMSFEMSDKDLNDLF 246
>gi|451847139|gb|EMD60447.1| hypothetical protein COCSADRAFT_40088 [Cochliobolus sativus ND90Pr]
Length = 445
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+++GNLP K +L + EI S +I V +P + + + A
Sbjct: 133 VWIGNLPWSATKDSLRTFLSENSEIASDQITRV-----HMPPPTKVNPSWTTKPLNKGFA 187
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC-----PPRKKLK-GEDA--------PLY 333
Y+ F +E + +A+A + G + + A P + K + G+D+ +
Sbjct: 188 YVDFSTELAMYSAIALTETKMDGRALLIKNAKSFEGRPDKPKTEEGQDSRRAGNTDKSGH 247
Query: 334 DIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTRE 393
K VF+GNL FDV E++ + + D+E + + KG A++ F E
Sbjct: 248 PPNKRVFIGNLSFDVTKEDLQEHYAQCGDIED----IHMATFEDSGKCKGYAWITFADVE 303
Query: 394 AANLVIK 400
+A +K
Sbjct: 304 SATWAVK 310
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 146 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 190
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 191 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 235
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLE 364
FVG L D +E+I + F ++E
Sbjct: 236 FVGGLSPDTSEEQIKEYFGAFGEIE 260
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 73/185 (39%), Gaps = 37/185 (20%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+D GK+ FVG L KK L F KFGE+ I+ P
Sbjct: 87 EDAGKM----FVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDP----------------- 125
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKK 337
N +I+FK S E L RLD R P+K + + P+ K
Sbjct: 126 NTGRSRGFGFILFKEPGSVEKVLE-------QKEHRLDGRLIDPKKAMAMKKDPV----K 174
Query: 338 TVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANL 397
+FVG L + +E+I + F + +EA+ + P +G ++ FK +
Sbjct: 175 KIFVGGLNPEATEEKIREYFGEFGE----IEAIELPMDPKTNKRRGFVFITFKEEDPVKK 230
Query: 398 VIKRR 402
V++++
Sbjct: 231 VLEKK 235
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 30/146 (20%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
D+GK+ F+G L KK L + +FGE+ I++ P+ +G
Sbjct: 130 DDGKM----FIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRS---RG-------- 174
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
+++FK S + L + G I RA K LKG++ P K V
Sbjct: 175 ------FGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA----KALKGKEPP-----KKV 219
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLES 365
FVG L D +E+I + F ++E+
Sbjct: 220 FVGGLSPDTSEEQIKEYFGAFGEIEN 245
>gi|171677404|ref|XP_001903653.1| hypothetical protein [Podospora anserina S mat+]
gi|170936770|emb|CAP61428.1| unnamed protein product [Podospora anserina S mat+]
Length = 1066
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 31/174 (17%)
Query: 227 TIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVH 286
T+FV N P ++ L F GEI S+R S + EN
Sbjct: 677 TLFVTNYPPDADEEYLRNLFKAHGEIHSIRFPS------------------LKENVKRRF 718
Query: 287 AYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
Y+ F+ S EAAL + +GG + + P K + A + ++ + V N+P
Sbjct: 719 CYLTFRERASAEAALKLDGKALGGRCRLVVKISDPAHKQHRQGA--QEEERELHVINIPR 776
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIK 400
+K++E+ F + S +R PH+ G A+V+ +T+E A IK
Sbjct: 777 TMKEDEVEGHFTKAGKVVS-------VRIPHL----GTAFVVMQTKEEAQEAIK 819
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 94/234 (40%), Gaps = 42/234 (17%)
Query: 198 KRKKADNETEDMLVHRKEEGFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRI 257
K++KAD+E K + +D G + +FVGNL + + L +EF +FGEI
Sbjct: 241 KKRKADDEPAAAAKKSKTDDVEDTGS--KNLFVGNLSWNIDDEWLYREFEEFGEI----T 294
Query: 258 RSVPIIDTKIPR-KGAILQKQINENADSVHAYIVFKSE-QSTEAALAFNMAVIGGNHIRL 315
R+ + D + R KG Y+ F S + A A A+I G +
Sbjct: 295 RANVLTDRESGRSKG--------------FGYVEFSSSAAAAAALAAKKGALIDGREANV 340
Query: 316 DRACPPRKKLKGEDA------------PLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDL 363
D + P G A P D T+FVGNL F+V + + + F
Sbjct: 341 DFSTPRTNDAPGARADNRAKQFGDSQNPPSD---TLFVGNLSFEVDQDAVGEAFG----E 393
Query: 364 ESSVEAVRVIRHPHMRVGKGIAYVLFKT-REAANLVIKRRNLKLRDRELRLSHA 416
+V VR+ KG YV F++ EA + ++ R RL +A
Sbjct: 394 HGTVVNVRLPTDMDSGNPKGFGYVTFESIDEAKTAYEAMKGQEIAGRPCRLDYA 447
>gi|410903107|ref|XP_003965035.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 461
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R ++VGN+P V ++++ + F + ++R + ++ P +L QIN+ D
Sbjct: 142 RRLYVGNIPFGVTEESMAEFF-------NAQMRLAGL--SQAP-SNPVLAVQINQ--DKN 189
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV------ 339
A++ F+S T A+AF+ + G +++ R R + P++ + V
Sbjct: 190 FAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQPVFHVPGVVSTVVPD 249
Query: 340 -----FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREA 394
F+G LP + D+++ +L L +A +++ + KG A+ + A
Sbjct: 250 SPHKLFIGGLPNYLNDDQVKELLTSFGPL----KAFNLVKDSATSLSKGYAFCEYVDVSA 305
Query: 395 ANLVIKRRN-LKLRDREL---RLSHAQQNCTPS 423
+ + N ++L D++L R S +N PS
Sbjct: 306 TDQAVAGLNGMQLGDKKLIVQRASVGAKNANPS 338
>gi|193678935|ref|XP_001949378.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Acyrthosiphon pisum]
Length = 226
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 336 KKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAA 395
K TV+V NLPF++ + +++++F + + V +++ R KG+A+VLF + A
Sbjct: 8 KCTVYVSNLPFNLTNNDLHKVF----EKYGKLVKVTIVKDKTTRQSKGVAFVLFLNQNEA 63
Query: 396 NLVIKRRN-LKLRDRELRLSHAQQN 419
N+ +K N +++ R L+ S A N
Sbjct: 64 NICVKSTNGIQMFGRTLKSSIAVDN 88
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 25/200 (12%)
Query: 220 DEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQIN 279
DE RT+FV L + +K L F + G + +VR+ I D R +
Sbjct: 260 DEESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRL----ITDKVTKRMKGV------ 309
Query: 280 ENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTV 339
Y+ F ++ + A+A + +V+ G I + P +K +K + +
Sbjct: 310 -------GYVEFSQKEMVDKAIALSGSVLDGQQILVHSIQPEKKVIKSNSTGSSGGESRI 362
Query: 340 FVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVI 399
+VG + V +E+I +F D ++ + + P + A++ FKT+E+A I
Sbjct: 363 YVGYIHLSVAEEQIRVIFQPYGD----IDFINIHTKPGI---SKYAFIQFKTQESAKRAI 415
Query: 400 KRRN-LKLRDRELRLSHAQQ 418
N +L + L+L+ Q
Sbjct: 416 TELNGYELMGKNLKLNMVSQ 435
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 35/191 (18%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + +K L F KFGEI+S+ +++ P + R
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDP----QTGRSRGF------------ 100
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF + ++ E A +I N ++D P + K + +FVG L
Sbjct: 101 -AFIVFTNTEAIEQVSAAEEHII--NSKKVD---PKKAKAR---------HGKIFVGGLT 145
Query: 346 FDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLK 405
++ DEEI F ++ VE + H KG ++ F + + ++K K
Sbjct: 146 TEISDEEIKTYFSQFGNI-VEVEMPFDKQKSHR---KGFCFITFDSEQVVTDLLKTPKQK 201
Query: 406 LRDRELRLSHA 416
+ +E+ + A
Sbjct: 202 ISGKEVDVKRA 212
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 30/196 (15%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRK---GAILQKQINENADS 284
+FVGNLP V + L + F G ++ + I + + R G + + E +
Sbjct: 113 LFVGNLPFDVDSEKLAQIFEGAGVVEIAEV----IYNRETDRSRGFGFVTMSTVEEAEKA 168
Query: 285 VHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPL-YDIKKTVFVGN 343
V Y F+ + G + +++A P + + E AP Y+ V+VGN
Sbjct: 169 VELYHKFE---------------VNGRFLTVNKAAP--RGSRPERAPREYEPSFRVYVGN 211
Query: 344 LPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRN 403
LP+DV D + Q+F V + RV+ +G A+V + N I +
Sbjct: 212 LPWDVDDARLEQVFSE----HGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIGALD 267
Query: 404 LK-LRDRELRLSHAQQ 418
+ L R +R++ A++
Sbjct: 268 GQTLEGRAIRVNVAEE 283
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 76/194 (39%), Gaps = 41/194 (21%)
Query: 226 RTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSV 285
R +FVG L + K L F +G+I+S+ +++ P N
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDP-----------------NTGRSRG 96
Query: 286 HAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKTVFVGNLP 345
A+IVF +S + ++ N +I G + +A K +FVG L
Sbjct: 97 FAFIVFAKAESLDKIMSANDHIINGKKVDPKKAKARHGK--------------IFVGGLS 142
Query: 346 FDVKDEEIYQLFCGLN---DLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRR 402
++ DE+I F D+E + + R KG ++ F++ + N ++K
Sbjct: 143 TELSDEDIKNFFSQFGTIVDVEMPFDKTKNQR-------KGFCFITFESEQVVNELLKTP 195
Query: 403 NLKLRDRELRLSHA 416
+ +E+ + A
Sbjct: 196 KQTINGKEVDVKKA 209
>gi|351704017|gb|EHB06936.1| Heterogeneous nuclear ribonucleoprotein A/B, partial
[Heterocephalus glaber]
Length = 261
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 228 IFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQINENADSVHA 287
+FVG L KK L F KFGE+ I+ P N
Sbjct: 2 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDP-----------------NTGRSRGFG 44
Query: 288 YIVFKSEQSTEAALAFNMAVIGGNHIRLD-RACPPRKKLKGEDAPLYDIKKTVFVGNLPF 346
+I+FK S E V+ RLD R P+K + + P+ K +FVG L
Sbjct: 45 FILFKDAASVE-------KVLDQKEHRLDGRVIDPKKAMAMKKDPV----KKIFVGGLNP 93
Query: 347 DVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLVIKRRNLKL 406
+ +E+I + F + +EA+ + P + +G ++ FK + V++++ +
Sbjct: 94 EATEEKIREYFGDFGE----IEAIELPMDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTI 149
Query: 407 RDRELRLSHAQ 417
+ + AQ
Sbjct: 150 SGSKCEIKVAQ 160
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 47/220 (21%)
Query: 202 ADNETEDMLVHRKEE--GFDDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRS 259
A+N D H E G DD+ R +FVG L + K L F + EI+S+ +++
Sbjct: 21 AENGGGDSQDHNSAEAPGRDDD----RKLFVGGLSWETTDKELRDHFGAYREIESINVKT 76
Query: 260 VPIIDTKIPRKGAILQKQINENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRAC 319
VP N A+IVFK+ +S + +A G H ++
Sbjct: 77 VP-----------------NTGRSRGFAFIVFKAPESIDKVMA------AGEHTINNKKV 113
Query: 320 PPRKKLKGEDAPLYDIKKTVFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMR 379
P KK K +FVG L ++ D+EI F S + + P +
Sbjct: 114 DP-KKAKARHG-------KIFVGGLSSEISDDEIRNFF-------SEFGTILEVEMPFDK 158
Query: 380 VG---KGIAYVLFKTREAANLVIKRRNLKLRDRELRLSHA 416
KG ++ F++ + N ++K + +E+ + A
Sbjct: 159 TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 198
>gi|410903804|ref|XP_003965383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
1 [Takifugu rubripes]
Length = 314
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 219 DDEGKLLRTIFVGNLPLKVKKKTLIKEFIKFGEIDSVRIRSVPIIDTKIPRKGAILQKQI 278
+DEGK+ FVG L KK L F K+GE+ ++ PI
Sbjct: 53 EDEGKM----FVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPIT--------------- 93
Query: 279 NENADSVHAYIVFKSEQSTEAALAFNMAVIGGNHIRLDRACPPRKKLKGEDAPLYDIKKT 338
+++FK +S E + + G I +A K +KG++ P+ K
Sbjct: 94 --GRSRGFGFVLFKEPESVEKVASQKEHKLNGKVIDPKKA----KAMKGKE-PV----KK 142
Query: 339 VFVGNLPFDVKDEEIYQLFCGLNDLESSVEAVRVIRHPHMRVGKGIAYVLFKTREAANLV 398
+FVG L D +E++ + F + VE++ + +G ++ FK E +
Sbjct: 143 IFVGGLSPDTPEEKVREYFGAFGE----VESIELPMETKTNKRRGFCFITFKEEEPVKCI 198
Query: 399 IKRR--NLKLRDRELRLSHAQQ 418
++++ N+ L E++++ +++
Sbjct: 199 MEKKFHNIGLSKCEIKVAVSKE 220
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,080,479,430
Number of Sequences: 23463169
Number of extensions: 340272679
Number of successful extensions: 1354922
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 7111
Number of HSP's that attempted gapping in prelim test: 1300415
Number of HSP's gapped (non-prelim): 39366
length of query: 548
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 400
effective length of database: 8,886,646,355
effective search space: 3554658542000
effective search space used: 3554658542000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 80 (35.4 bits)