Query 008950
Match_columns 548
No_of_seqs 437 out of 2521
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 15:24:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 7.5E-34 2.6E-38 282.4 29.4 237 259-534 14-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 7.3E-33 2.5E-37 276.7 15.7 237 258-534 14-276 (296)
3 2dmh_A Myoferlin; beta-sandwic 99.9 1E-20 3.4E-25 167.0 16.4 129 261-396 4-135 (140)
4 1wfj_A Putative elicitor-respo 99.8 6.8E-21 2.3E-25 167.2 13.0 128 258-397 4-133 (136)
5 3b7y_A E3 ubiquitin-protein li 99.8 2.8E-20 9.7E-25 166.7 15.2 129 260-394 16-153 (153)
6 1rlw_A Phospholipase A2, CALB 99.8 2.4E-20 8.1E-25 161.4 14.1 120 263-393 2-124 (126)
7 2fk9_A Protein kinase C, ETA t 99.8 9.3E-21 3.2E-25 169.2 11.5 119 259-393 24-156 (157)
8 2ep6_A MCTP2 protein; beta san 99.8 2.3E-20 8E-25 163.1 12.8 126 258-394 7-132 (133)
9 1gmi_A Protein kinase C, epsil 99.8 3.4E-20 1.2E-24 162.7 13.0 118 262-395 4-134 (136)
10 3kwu_A MUNC13-1; calcium bindi 99.8 3.2E-19 1.1E-23 158.9 17.8 122 261-393 14-146 (148)
11 3m7f_B E3 ubiquitin-protein li 99.8 1.6E-19 5.5E-24 165.7 16.1 130 260-395 4-142 (176)
12 2fk9_A Protein kinase C, ETA t 99.8 4.3E-19 1.5E-23 158.3 14.1 113 426-546 26-156 (157)
13 3pyc_A E3 ubiquitin-protein li 99.8 8.5E-19 2.9E-23 152.9 15.3 125 262-392 3-131 (132)
14 2dmh_A Myoferlin; beta-sandwic 99.8 1.7E-18 5.8E-23 152.6 15.6 118 427-547 5-133 (140)
15 1rlw_A Phospholipase A2, CALB 99.8 1E-18 3.5E-23 151.1 13.6 115 428-547 2-125 (126)
16 2z0u_A WW domain-containing pr 99.8 2.8E-19 9.4E-24 160.2 9.9 110 259-368 38-153 (155)
17 2d8k_A Synaptotagmin VII; exoc 99.8 1.2E-18 4.1E-23 153.8 12.0 112 259-370 21-135 (141)
18 3f04_A Synaptotagmin-1; C2A, c 99.8 1.4E-18 4.9E-23 153.7 12.4 111 259-369 29-141 (143)
19 1rsy_A Synaptotagmin I; calciu 99.8 1.9E-18 6.4E-23 154.6 13.0 111 259-369 37-149 (152)
20 2nq3_A Itchy homolog E3 ubiqui 99.8 1.7E-18 5.9E-23 157.8 12.4 126 261-396 33-163 (173)
21 2b3r_A Phosphatidylinositol-4- 99.8 2.8E-18 9.4E-23 150.0 13.2 109 260-369 16-129 (134)
22 1wfj_A Putative elicitor-respo 99.8 4E-18 1.4E-22 149.4 13.2 117 427-548 8-131 (136)
23 1ugk_A Synaptotagmin IV, KIAA1 99.8 7.2E-18 2.5E-22 148.2 13.5 112 259-370 17-133 (138)
24 1wfm_A Synaptotagmin XIII; C2 99.7 2.3E-17 7.8E-22 145.0 16.0 121 380-535 9-134 (138)
25 3fbk_A RGS3, RGP3, regulator o 99.7 7.3E-18 2.5E-22 150.9 13.0 124 379-537 9-141 (153)
26 3b7y_A E3 ubiquitin-protein li 99.7 1.7E-17 6E-22 148.4 14.8 117 426-547 17-153 (153)
27 2ep6_A MCTP2 protein; beta san 99.7 1.1E-17 3.7E-22 146.1 13.0 114 426-546 10-131 (133)
28 2chd_A Rabphilin-3A, exophilin 99.7 5.9E-18 2E-22 149.5 11.4 111 259-369 24-139 (142)
29 3kwu_A MUNC13-1; calcium bindi 99.7 3.6E-17 1.2E-21 145.5 16.6 117 426-546 14-146 (148)
30 1gmi_A Protein kinase C, epsil 99.7 1.3E-17 4.5E-22 146.1 13.6 112 428-547 5-133 (136)
31 1v27_A Regulating synaptic mem 99.7 9.2E-18 3.1E-22 148.0 12.5 122 380-537 4-137 (141)
32 3rdl_A Protein kinase C alpha 99.7 7.4E-18 2.5E-22 147.9 11.3 106 428-537 15-128 (137)
33 3fdw_A Synaptotagmin-like prot 99.7 1.2E-17 4.1E-22 148.6 12.4 121 380-535 6-136 (148)
34 2d8k_A Synaptotagmin VII; exoc 99.7 2.4E-17 8.1E-22 145.4 14.0 121 380-535 9-137 (141)
35 1rsy_A Synaptotagmin I; calciu 99.7 1.3E-17 4.3E-22 149.2 12.3 120 380-534 25-151 (152)
36 2bwq_A Regulating synaptic mem 99.7 9.3E-18 3.2E-22 145.6 11.1 109 259-368 13-128 (129)
37 1wfm_A Synaptotagmin XIII; C2 99.7 1.6E-17 5.3E-22 146.0 12.5 109 259-370 21-132 (138)
38 2bwq_A Regulating synaptic mem 99.7 1.9E-17 6.4E-22 143.7 12.7 115 382-532 3-129 (129)
39 3fdw_A Synaptotagmin-like prot 99.7 4.8E-18 1.7E-22 151.2 9.1 112 259-370 18-134 (148)
40 1a25_A CALB, protein kinase C 99.7 7.7E-18 2.6E-22 150.1 10.0 107 429-539 31-145 (149)
41 2enp_A B/K protein; C2 type 1, 99.7 7.3E-18 2.5E-22 149.9 9.8 111 259-369 21-140 (147)
42 3nsj_A Perforin-1; pore formin 99.7 2.2E-16 7.4E-21 167.7 21.9 177 195-393 304-503 (540)
43 2enp_A B/K protein; C2 type 1, 99.7 2.1E-17 7.2E-22 146.9 11.9 121 379-534 8-142 (147)
44 1a25_A CALB, protein kinase C 99.7 2.7E-17 9.1E-22 146.6 12.5 107 263-370 30-139 (149)
45 1w15_A Synaptotagmin IV; metal 99.7 9.5E-18 3.2E-22 150.2 9.4 129 380-548 13-150 (153)
46 2cm5_A Rabphilin-3A; protein t 99.7 1.2E-17 4.1E-22 151.7 10.1 128 380-547 20-156 (166)
47 2dmg_A KIAA1228 protein; beta- 99.7 1.1E-17 3.7E-22 147.8 9.6 111 259-370 19-135 (142)
48 1rh8_A Piccolo protein; beta-s 99.7 5.9E-18 2E-22 149.5 7.6 107 263-369 17-137 (142)
49 3rdl_A Protein kinase C alpha 99.7 1.9E-17 6.5E-22 145.2 10.7 108 262-370 14-124 (137)
50 3f04_A Synaptotagmin-1; C2A, c 99.7 3.7E-17 1.3E-21 144.6 12.6 118 381-533 18-142 (143)
51 2q3x_A Regulating synaptic mem 99.7 2.1E-17 7.1E-22 150.8 11.1 108 262-370 28-139 (171)
52 3m7f_B E3 ubiquitin-protein li 99.7 6.5E-17 2.2E-21 148.3 14.3 116 427-547 6-141 (176)
53 1v27_A Regulating synaptic mem 99.7 2E-17 6.9E-22 145.8 10.3 111 259-370 16-133 (141)
54 2z0u_A WW domain-containing pr 99.7 1.4E-17 4.9E-22 149.0 9.0 118 380-532 26-154 (155)
55 2b3r_A Phosphatidylinositol-4- 99.7 7.8E-17 2.7E-21 140.8 13.3 107 428-537 19-134 (134)
56 3fbk_A RGS3, RGP3, regulator o 99.7 4.6E-17 1.6E-21 145.7 12.0 111 259-370 22-137 (153)
57 3n5a_A Synaptotagmin-7; calciu 99.7 1.4E-17 4.8E-22 146.2 7.8 126 383-548 2-136 (138)
58 1tjx_A Similar to synaptotagmi 99.7 1.1E-16 3.8E-21 144.2 13.3 98 259-356 20-121 (159)
59 3n5a_A Synaptotagmin-7; calciu 99.7 7.8E-17 2.7E-21 141.5 11.4 99 259-357 11-113 (138)
60 2dmg_A KIAA1228 protein; beta- 99.7 4.3E-17 1.5E-21 143.9 9.8 121 379-535 6-137 (142)
61 1rh8_A Piccolo protein; beta-s 99.7 2.1E-17 7.2E-22 145.9 7.6 120 380-536 3-141 (142)
62 1ugk_A Synaptotagmin IV, KIAA1 99.7 3.1E-16 1E-20 137.7 14.9 121 380-535 5-135 (138)
63 1tjx_A Similar to synaptotagmi 99.7 2.4E-16 8.1E-21 142.0 14.0 121 379-534 7-148 (159)
64 3pyc_A E3 ubiquitin-protein li 99.7 2.9E-16 1E-20 136.7 14.2 113 428-546 4-132 (132)
65 2cjt_A UNC-13 homolog A, MUNC1 99.7 1.4E-16 4.8E-21 138.3 11.9 89 261-359 2-91 (131)
66 2cm5_A Rabphilin-3A; protein t 99.7 2.4E-16 8E-21 143.1 13.7 99 259-357 32-134 (166)
67 2chd_A Rabphilin-3A, exophilin 99.7 1.3E-16 4.5E-21 140.8 11.6 119 380-533 12-140 (142)
68 1w15_A Synaptotagmin IV; metal 99.7 1E-16 3.5E-21 143.4 10.4 97 259-355 25-125 (153)
69 2nq3_A Itchy homolog E3 ubiqui 99.7 3.7E-16 1.3E-20 142.4 13.7 116 427-548 34-162 (173)
70 2r83_A Synaptotagmin-1; C2A-C2 99.7 6.2E-16 2.1E-20 153.0 16.3 132 381-547 3-147 (284)
71 2q3x_A Regulating synaptic mem 99.7 2.8E-16 9.7E-21 143.2 12.6 116 380-534 15-140 (171)
72 3l9b_A Otoferlin; C2-domain, b 99.7 5.2E-16 1.8E-20 132.8 11.8 118 264-395 21-141 (144)
73 3jzy_A Intersectin 2; C2 domai 99.6 6.1E-16 2.1E-20 166.0 12.8 122 260-394 383-508 (510)
74 3l9b_A Otoferlin; C2-domain, b 99.6 9E-15 3.1E-19 125.1 13.1 113 430-547 22-140 (144)
75 2cjs_A UNC-13 homolog A, MUNC1 99.6 4.7E-15 1.6E-19 134.0 11.6 88 262-359 12-100 (167)
76 1dqv_A Synaptotagmin III; beta 99.6 9.2E-15 3.2E-19 145.4 13.2 133 380-547 3-149 (296)
77 1cjy_A CPLA2, protein (cytosol 99.6 4.1E-15 1.4E-19 162.7 10.2 108 261-369 15-125 (749)
78 2cjt_A UNC-13 homolog A, MUNC1 99.6 3.4E-14 1.2E-18 123.2 13.3 111 427-545 3-130 (131)
79 3jzy_A Intersectin 2; C2 domai 99.5 3.4E-14 1.1E-18 152.4 14.9 116 427-546 385-507 (510)
80 2cjs_A UNC-13 homolog A, MUNC1 99.5 5.4E-14 1.9E-18 127.0 12.0 88 428-523 13-101 (167)
81 1djx_A PLC-D1, phosphoinositid 99.5 1.1E-13 3.8E-18 150.3 15.1 123 262-393 495-623 (624)
82 3nsj_A Perforin-1; pore formin 99.5 3.2E-13 1.1E-17 143.4 16.1 109 427-545 392-502 (540)
83 3bxj_A RAS GTPase-activating p 99.4 2.1E-14 7.3E-19 152.0 0.3 127 262-396 9-159 (483)
84 1cjy_A CPLA2, protein (cytosol 99.4 1.7E-12 5.7E-17 142.1 11.4 108 427-541 16-132 (749)
85 3bxj_A RAS GTPase-activating p 99.4 6.4E-14 2.2E-18 148.3 -0.2 117 427-547 9-157 (483)
86 1djx_A PLC-D1, phosphoinositid 99.3 8.1E-12 2.8E-16 135.6 14.7 113 427-546 495-623 (624)
87 3pfq_A PKC-B, PKC-beta, protei 99.2 1.1E-11 3.8E-16 137.1 9.5 106 263-369 171-279 (674)
88 3pfq_A PKC-B, PKC-beta, protei 99.2 9E-11 3.1E-15 129.7 12.7 104 428-535 171-282 (674)
89 3ohm_B 1-phosphatidylinositol- 99.1 1.7E-10 5.8E-15 128.3 13.0 119 263-397 724-848 (885)
90 2zkm_X 1-phosphatidylinositol- 99.1 2.7E-10 9.4E-15 126.6 13.3 115 262-393 676-798 (799)
91 3qr0_A Phospholipase C-beta (P 99.1 4.1E-10 1.4E-14 124.6 14.2 118 263-396 649-773 (816)
92 1yrk_A NPKC-delta, protein kin 99.0 4.9E-09 1.7E-13 86.9 12.8 113 263-393 5-124 (126)
93 3qr0_A Phospholipase C-beta (P 99.0 3.5E-09 1.2E-13 117.2 14.4 108 427-546 648-770 (816)
94 3ohm_B 1-phosphatidylinositol- 98.9 4.2E-09 1.5E-13 117.1 13.2 107 428-546 724-844 (885)
95 2zkm_X 1-phosphatidylinositol- 98.9 5.2E-09 1.8E-13 116.4 13.7 108 427-546 676-798 (799)
96 1yrk_A NPKC-delta, protein kin 98.9 4.9E-08 1.7E-12 81.0 15.7 107 428-546 5-124 (126)
97 2enj_A NPKC-theta, protein kin 98.9 6.5E-09 2.2E-13 87.3 10.4 114 263-394 9-130 (138)
98 2enj_A NPKC-theta, protein kin 98.9 5.1E-08 1.8E-12 81.9 13.8 108 427-546 8-129 (138)
99 3l4c_A Dedicator of cytokinesi 92.1 2.2 7.4E-05 39.1 12.6 56 299-354 77-138 (220)
100 2yrb_A Protein fantom; beta sa 91.9 0.84 2.9E-05 39.4 9.1 115 426-546 15-149 (156)
101 2yrb_A Protein fantom; beta sa 91.2 2.9 9.8E-05 36.1 11.7 128 260-395 14-151 (156)
102 3hhm_A Phosphatidylinositol-4, 88.9 3.7 0.00013 46.7 13.4 93 263-357 354-456 (1091)
103 2wxf_A Phosphatidylinositol-4, 88.5 2.2 7.4E-05 48.0 11.2 92 263-357 216-325 (940)
104 2wxf_A Phosphatidylinositol-4, 88.4 1.5 5.2E-05 49.3 9.9 93 428-520 216-325 (940)
105 1e7u_A Phosphatidylinositol 3- 83.3 7.4 0.00025 43.8 12.1 94 264-358 218-332 (961)
106 3hhm_A Phosphatidylinositol-4, 77.9 4.9 0.00017 45.6 8.3 93 427-520 353-456 (1091)
107 1e7u_A Phosphatidylinositol 3- 75.9 7.3 0.00025 43.9 9.0 93 428-520 217-331 (961)
108 2y3a_A Phosphatidylinositol-4, 74.8 2.1 7.1E-05 48.8 4.3 92 428-519 352-470 (1092)
109 2y3a_A Phosphatidylinositol-4, 71.4 4.7 0.00016 45.9 6.1 73 263-338 352-430 (1092)
110 3l4c_A Dedicator of cytokinesi 68.7 15 0.00053 33.4 7.8 61 458-518 77-139 (220)
111 2ks1_B Epidermal growth factor 47.4 2.5 8.4E-05 28.0 -1.0 14 23-36 26-39 (44)
112 2l2t_A Receptor tyrosine-prote 41.1 3.3 0.00011 27.3 -1.1 15 23-37 25-39 (44)
113 2jwa_A Receptor tyrosine-prote 40.0 2.1 7.1E-05 28.3 -2.2 24 13-36 16-39 (44)
114 1iij_A ERBB-2 receptor protein 24.4 7.2 0.00025 24.3 -1.5 24 12-35 11-34 (35)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=7.5e-34 Score=282.45 Aligned_cols=237 Identities=27% Similarity=0.406 Sum_probs=196.9
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d 336 (548)
+....|.|.|+|++|++|+.+|..|.+||||++++++.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 4456799999999999999999999999999999986544457899999999999999999998643 35799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEEecccCcccccccccccccCCCCC
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGN 416 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~ 416 (548)
+|.+++|++||++.+++.++..+.....|++|.... .......|+|++++.|.|.
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~----~~~~~~~G~i~l~l~~~p~--------------------- 148 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAE----KEEQEKLGDICFSLRYVPT--------------------- 148 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCS----SCCCCCCCEEEEEEEEETT---------------------
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeeccc----cccccccccEEEEEEecCc---------------------
Confidence 999999999999999999999888788888885421 1123467999999998763
Q ss_pred CCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC-----eEEEeeeccCCCCCccCceEEEEccCCCC-C
Q 008950 417 DQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-H 487 (548)
Q Consensus 417 ~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~ 487 (548)
.+.|.|+|++|++|+.. +.+||||++++.+ .+++|++++++.||+|||+|.|.+..... .
T Consensus 149 -----------~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 217 (284)
T 2r83_A 149 -----------AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQK 217 (284)
T ss_dssp -----------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGG
T ss_pred -----------CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCc
Confidence 57899999999999863 5789999999842 35699999999999999999999876433 2
Q ss_pred CeEEEEEEEccCCccCCCCcceEEEEEechhh----------hc--cceeceEEEeCCC
Q 008950 488 EKIHIEVMSKRTGIRFWSKESLGHVEINLTDV----------VH--NGRINEKYHLINS 534 (548)
Q Consensus 488 ~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l----------~~--~~~~~~w~~L~~~ 534 (548)
..|.|+|||++. ++.+++||++.++++.+ +. +....+||+|.+.
T Consensus 218 ~~l~i~V~d~d~---~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 218 VQVVVTVLDYDK---IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp EEEEEEEEECCS---SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred eEEEEEEEeCCC---CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 379999999985 67899999999999763 22 2355789988764
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=7.3e-33 Score=276.74 Aligned_cols=237 Identities=25% Similarity=0.400 Sum_probs=188.2
Q ss_pred cccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEEE
Q 008950 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVF 335 (548)
Q Consensus 258 ~~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~ 335 (548)
.+....+.|.|+|++|++|+.+|..|.+||||++++.+.....++|+++++++||+|||+|.|.+... ....|.|+||
T Consensus 14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~ 93 (296)
T 1dqv_A 14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93 (296)
T ss_dssp ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEE
Confidence 34556799999999999999999999999999999954433457999999999999999999998643 2458999999
Q ss_pred EcCCCCCCCeeEEEEEE-CcccCC-CCceEEEEeccccccCCCCCCCccccEEEEEEEEEecccCcccccccccccccCC
Q 008950 336 DWDKVGGHDRLGMQLVP-LKLLTP-HETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKG 413 (548)
Q Consensus 336 d~d~~~~dd~lG~~~i~-l~~l~~-~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~ 413 (548)
|+|.+++|++||++.++ +.++.. ......|.+|... .......|+|++++.|.|.
T Consensus 94 d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~-----~~~~~~~G~i~vsl~y~~~------------------ 150 (296)
T 1dqv_A 94 DFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG-----GSEKADLGELNFSLCYLPT------------------ 150 (296)
T ss_dssp ECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCC-----SSCCSCCCEEEEEEEEETT------------------
T ss_pred EcCCCCCCceEEEEEeccccccccCCccceeeeccccc-----cccccccceEEEEEEeccc------------------
Confidence 99999999999999996 444443 2233445555321 1123567999999998763
Q ss_pred CCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc--C---eEEEeeeccCCCCCccCceEEEEccCCC
Q 008950 414 SGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK--G---DKKRTKMIRKTRDPAWNEEFQFMLDEPP 485 (548)
Q Consensus 414 ~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~--~---~~~kT~v~~~t~nP~wne~f~f~v~~~~ 485 (548)
.|.|.|+|++|++|+.. +.+||||++++. + .+++|++++++.||+|||.|.|.+....
T Consensus 151 --------------~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 216 (296)
T 1dqv_A 151 --------------AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPES 216 (296)
T ss_dssp --------------TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGG
T ss_pred --------------cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHH
Confidence 58999999999999863 578999999996 2 4579999999999999999999987642
Q ss_pred C-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhc-------------cceeceEEEeCCC
Q 008950 486 L-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVH-------------NGRINEKYHLINS 534 (548)
Q Consensus 486 ~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~-------------~~~~~~w~~L~~~ 534 (548)
. ...|.|+|||++. ++.+++||++.++++++.. +....+|++|...
T Consensus 217 l~~~~L~i~V~d~d~---~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 217 VENVGLSIAVVDYDC---IGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp GGSCCCCCEEEECCS---SSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred ccCcEEEEEEEeCCC---CCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 2 2379999999985 6789999999999987643 2244567777654
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=167.00 Aligned_cols=129 Identities=31% Similarity=0.448 Sum_probs=109.5
Q ss_pred CCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC---CCCEEEEEEEEc
Q 008950 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP---ESQILQLQVFDW 337 (548)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~---~~~~L~v~v~d~ 337 (548)
...|.|.|+|++|++|+..|. |.+||||++++++++ ++|++++++.||+|||+|.|.+..+ ....|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 456999999999999999998 999999999999764 6999999999999999999999753 368999999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEEecc
Q 008950 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (548)
Q Consensus 338 d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 396 (548)
|..++|++||++.+++.++..+.....|+++....+. .+....|+|+++++|.|..
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~---~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNE---KGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECT---TCCEEEEEEEEEEEECCCB
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCC---CCCCCCCEEEEEEEEECCC
Confidence 9999999999999999999888777777763222221 1235679999999999854
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.85 E-value=6.8e-21 Score=167.18 Aligned_cols=128 Identities=31% Similarity=0.505 Sum_probs=110.9
Q ss_pred cccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeec-CCCCCeeeceEEEEEecCCCCEEEEEEEE
Q 008950 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFD 336 (548)
Q Consensus 258 ~~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~v~d 336 (548)
....+.|.|+|+|++|++|+..|..|.+||||+++++++. ++|++++ ++.||+|||+|.|.+.+ ....|.|+|||
T Consensus 4 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d 79 (136)
T 1wfj_A 4 GSSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFD 79 (136)
T ss_dssp CCCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECC
T ss_pred CCCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEE
Confidence 3456889999999999999999989999999999999865 5899998 89999999999999987 56799999999
Q ss_pred cCCCCCCCeeEEEEEECcccC-CCCceEEEEeccccccCCCCCCCccccEEEEEEEEEeccc
Q 008950 337 WDKVGGHDRLGMQLVPLKLLT-PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKE 397 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~-~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~ 397 (548)
++.+++|++||++.+++.++. .+.....|++|.. +....|+|+++++|.|...
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--------~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVK--------DEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEEE--------TTEEEEEEEEEEEEEECCS
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCCCcEEEEeec--------CCccCEEEEEEEEEEeCCC
Confidence 999999999999999999994 4444566777642 2568899999999999753
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=2.8e-20 Score=166.73 Aligned_cols=129 Identities=33% Similarity=0.519 Sum_probs=101.8
Q ss_pred cCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcc---cceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEE
Q 008950 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK---LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (548)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~---~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d 336 (548)
....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.. ....|.|+|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEE
Confidence 45679999999999999999988999999999998532 245799999999999999999999976 45789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce------EEEEeccccccCCCCCCCccccEEEEEEEEEe
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETK------EFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~------~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 394 (548)
++..++|++||++.+++.++..+... ..|++|.... ......|+|+++++|.|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-----TTCCCCSEEEEEEEECC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-----CCCCcceEEEEEEEEeC
Confidence 99999999999999999999876532 3677764321 12467899999999986
No 6
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=2.4e-20 Score=161.41 Aligned_cols=120 Identities=26% Similarity=0.407 Sum_probs=103.3
Q ss_pred ceEEEEEEEEecCccc---cCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCC
Q 008950 263 VGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (548)
.|.|.|+|++|++|+. .|..|.+||||++++++.....++|++++++.||+|||+|.|.+.......|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 4667899999999999754445799999999999999999999976677899999999998
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEE
Q 008950 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (548)
Q Consensus 340 ~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 393 (548)
. +|++||++.++++++..+.....|++|. ....|+|+++++-.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~----------~~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFN----------QVTEMVLEMSLEVA 124 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEET----------TTEEEEEEEEEECC
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcC----------CCceEEEEEEEEeC
Confidence 7 4899999999999999888888999883 24567777777543
No 7
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=9.3e-21 Score=169.15 Aligned_cols=119 Identities=27% Similarity=0.330 Sum_probs=102.6
Q ss_pred ccCCceEEEEEEEEecCccccCCC----------CCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCC
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFL----------GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQ 328 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~----------g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~ 328 (548)
.....|.|+|+|++|++|+++|.. |.+||||++++++++. .+|+++++|+||+|||+|.|.+.+ .+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~--~kT~v~~ktlnP~WNE~F~f~v~~--~~ 99 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRV--GQTSTKQKTNKPTYNEEFCANVTD--GG 99 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEE--EECCCCSSCSSCEEEEEEEEEEEE--EC
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEee--EEeeecCCCCCCccCcEEEEEcCC--CC
Confidence 345679999999999999998832 6799999999987653 589999999999999999999975 46
Q ss_pred EEEEEEEEcCCCCCCCeeEEEEEECcccCCC----CceEEEEeccccccCCCCCCCccccEEEEEEEEE
Q 008950 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPH----ETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (548)
Q Consensus 329 ~L~v~v~d~d~~~~dd~lG~~~i~l~~l~~~----~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 393 (548)
.|.|+|||+|.+++|++||++.++++++..+ .....|++|. ..|+|+++++|.
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------------SSCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------------CCcEEEEEEEEE
Confidence 8999999999999999999999999998854 5677888872 379999999874
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2.3e-20 Score=163.11 Aligned_cols=126 Identities=35% Similarity=0.516 Sum_probs=107.4
Q ss_pred cccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEc
Q 008950 258 AIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (548)
Q Consensus 258 ~~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~ 337 (548)
....+.|.|+|+|++|++|+..|..|.+||||+++++++. ++|++++++.||.|||+|.|.+.+. .+.|.|+|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4567889999999999999999999999999999999864 5999999999999999999999764 57899999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEEe
Q 008950 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (548)
Q Consensus 338 d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 394 (548)
|..++|++||++.+++.++..+.. .|++|... ..+....|+|+++++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~~--~w~~L~~~-----~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQP--NCYVLKNK-----DLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSCC--EECCCBCS-----CTTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCCc--eEEEeecC-----CCCCccceEEEEEEEEEe
Confidence 998899999999999999987654 45565421 112467899999998863
No 9
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.83 E-value=3.4e-20 Score=162.70 Aligned_cols=118 Identities=24% Similarity=0.342 Sum_probs=101.3
Q ss_pred CceEEEEEEEEecCccccCCCCC-----------CCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEE
Q 008950 262 PVGILHVKVVRASKLLKKDFLGT-----------SDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQIL 330 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~-----------~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L 330 (548)
..|.|+|+|++|++|++.|..++ +||||++++++.. ..+|+++++|+||+|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 45999999999999999886554 9999999998654 35899999999999999999999764 789
Q ss_pred EEEEEEcCCCCCCCeeEEEEEECcccCCCC--ceEEEEeccccccCCCCCCCccccEEEEEEEEEec
Q 008950 331 QLQVFDWDKVGGHDRLGMQLVPLKLLTPHE--TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (548)
Q Consensus 331 ~v~v~d~d~~~~dd~lG~~~i~l~~l~~~~--~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 395 (548)
.|+|||+|..++|++||++.++++++..+. ....|+++ ...|+|+++++|.+.
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L------------~~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDL------------EPEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEEC------------BSSCEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEc------------CCCeEEEEEEEEEec
Confidence 999999999999999999999999998753 23677765 237999999999864
No 10
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=3.2e-19 Score=158.86 Aligned_cols=122 Identities=30% Similarity=0.439 Sum_probs=103.0
Q ss_pred CCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCCC
Q 008950 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (548)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 340 (548)
...|.|+|+|++|++|+.+|..|.+||||+++++++. ++|+++++++||.|||+|.|.+..+ .+.|.|+|||+|..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~ 89 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDD 89 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCS
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCC
Confidence 4569999999999999999999999999999998654 6999999999999999999999765 47899999999985
Q ss_pred -----------CCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEE
Q 008950 341 -----------GGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (548)
Q Consensus 341 -----------~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 393 (548)
++|++||++.+++.++. .....|++|.... ......|+|+++++|.
T Consensus 90 ~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~-----~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 90 IKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRT-----DKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSS-----TTCCCCCEEEEEEEEE
T ss_pred ccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCC-----CCCCCceEEEEEEEEE
Confidence 78999999999999994 3455677764321 1245789999999885
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.6e-19 Score=165.73 Aligned_cols=130 Identities=32% Similarity=0.498 Sum_probs=100.3
Q ss_pred cCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCccc---ceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEE
Q 008950 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL---PWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFD 336 (548)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~---~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d 336 (548)
....|.|+|+|++|++|+.+|..|.+||||++++++... ..++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d 82 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFD 82 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEE
Confidence 346799999999999999999999999999999985322 34799999999999999999999975 45789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCce-E-----EEEeccccccCCCCCCCccccEEEEEEEEEec
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETK-E-----FTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~-~-----~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 395 (548)
++.+++|++||++.++|.++..+... . .|++|.... ...+..|+|++++.|.|.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-----~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS-----HKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS-----TTCCCCSEEEEEEEECC-
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC-----CCCccCEEEEEEEEEEeC
Confidence 99999999999999999999876433 1 566664321 124578999999999997
No 12
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=4.3e-19 Score=158.34 Aligned_cols=113 Identities=17% Similarity=0.257 Sum_probs=99.6
Q ss_pred CCceEEEEEEeeeecCCCC-------------CCCCcEEEEEEcCeE-EEeeeccCCCCCccCceEEEEccCCCCCCeEE
Q 008950 426 SGAGLLSVLVQGAEDVEGE-------------NHNNPYAIILYKGDK-KRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIH 491 (548)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~-------------~~~dpyv~v~l~~~~-~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~ 491 (548)
...|.|+|+|.+|+||+.. +.+||||++.+++++ .+|+++++|.||+|||+|+|.+.+. ..|.
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~---~~L~ 102 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG---GHLE 102 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC---CEEE
Confidence 3579999999999999853 458999999998876 5999999999999999999998753 5899
Q ss_pred EEEEEccCCccCCCCcceEEEEEechhhhcc----ceeceEEEeCCCCCeEEEEEEEEE
Q 008950 492 IEVMSKRTGIRFWSKESLGHVEINLTDVVHN----GRINEKYHLINSKRGVIHVDIRWK 546 (548)
Q Consensus 492 v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~----~~~~~w~~L~~~~~G~i~l~~~~~ 546 (548)
|+|||++. ++.|++||++.|+|+++..+ ...+.||+|.. +|+|+|+++|.
T Consensus 103 ~~V~D~d~---~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETP---LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCS---SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred EEEEECCC---CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 99999874 67899999999999999865 66789999974 89999999985
No 13
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.80 E-value=8.5e-19 Score=152.93 Aligned_cols=125 Identities=29% Similarity=0.438 Sum_probs=99.9
Q ss_pred CceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCCCC
Q 008950 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKVG 341 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~~ 341 (548)
....|+|+|++|++|+++|..|.+||||++++++.. ..++|+++++|+||+|||+|.|.+.+. +.|.|+|||+|..+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 357899999999999999999999999999998643 357999999999999999999999764 35999999999887
Q ss_pred C---CCeeEEEEEECcccC-CCCceEEEEeccccccCCCCCCCccccEEEEEEEE
Q 008950 342 G---HDRLGMQLVPLKLLT-PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTY 392 (548)
Q Consensus 342 ~---dd~lG~~~i~l~~l~-~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~ 392 (548)
+ |++||++.+++.++. .......+++|... .+. ......|+|++++++
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~-~~~--~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKL-NPS--DTDAVRGQIVVSLQT 131 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCS-STT--CCCCCCSEEEEEEEE
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeeec-CCC--CCCceeEEEEEEEEc
Confidence 6 899999999998883 22333455666432 111 123578999999865
No 14
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.7e-18 Score=152.60 Aligned_cols=118 Identities=25% Similarity=0.475 Sum_probs=103.5
Q ss_pred CceEEEEEEeeeecCCCC--CCCCcEEEEEEcCeEEEeeeccCCCCCccCceEEEEccCCC--CCCeEEEEEEEccCCcc
Q 008950 427 GAGLLSVLVQGAEDVEGE--NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSKRTGIR 502 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~--~~~dpyv~v~l~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~~l~v~V~d~~~~~~ 502 (548)
..|.|.|+|++|++|+.. +.+||||++++++++++|++++++.||+|||+|.|.+..+. ....|.|+|||++.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~--- 81 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET--- 81 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC---
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC---
Confidence 468999999999999864 47999999999999999999999999999999999997642 24689999999985
Q ss_pred CCCCcceEEEEEechhhhccceeceEEE---eCCCC----CeEEEEEEEEEe
Q 008950 503 FWSKESLGHVEINLTDVVHNGRINEKYH---LINSK----RGVIHVDIRWKM 547 (548)
Q Consensus 503 ~~~d~~lG~~~i~L~~l~~~~~~~~w~~---L~~~~----~G~i~l~~~~~~ 547 (548)
++.|++||++.++|.++..+.....||+ |.+.. .|+|+|+++|.|
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 6788999999999999988777788988 65543 499999999987
No 15
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=1e-18 Score=151.05 Aligned_cols=115 Identities=20% Similarity=0.391 Sum_probs=101.1
Q ss_pred ceEEEEEEeeeecCCCC------CCCCcEEEEEEcC---eEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEcc
Q 008950 428 AGLLSVLVQGAEDVEGE------NHNNPYAIILYKG---DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKR 498 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~------~~~dpyv~v~l~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~ 498 (548)
.|.|.|+|++|++|+.. +.+||||++++++ ..++|++++++.||+|||+|.|.+..+ ....|.|+|||++
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d 80 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDAN 80 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECC
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECC
Confidence 68999999999999972 6899999999986 678999999999999999999999664 4568999999998
Q ss_pred CCccCCCCcceEEEEEechhhhccceeceEEEeCCCCCeEEEEEEEEEe
Q 008950 499 TGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSKRGVIHVDIRWKM 547 (548)
Q Consensus 499 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~~~~~~ 547 (548)
. . +|++||++.++|.++..+.....||+|.+.+.|.|+++++..|
T Consensus 81 ~---~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 81 Y---V-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVAS 125 (126)
T ss_dssp S---S-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECCC
T ss_pred C---C-CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeCC
Confidence 4 3 5899999999999998888888999999888888888887543
No 16
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=2.8e-19 Score=160.18 Aligned_cols=110 Identities=14% Similarity=0.093 Sum_probs=94.9
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcC---cccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTG---EKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~---~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~ 333 (548)
+....+.|+|+|++|+||+++|..|.+||||++++.+ .....+||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 4556799999999999999999999999999999976 333357999999999999999999998642 25689999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCC-CCceEEEEec
Q 008950 334 VFDWDKVGGHDRLGMQLVPLKLLTP-HETKEFTLDL 368 (548)
Q Consensus 334 v~d~d~~~~dd~lG~~~i~l~~l~~-~~~~~~~l~l 368 (548)
|||+|..++|++||++.++++++.. +.....|++|
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L 153 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNL 153 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEE
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEc
Confidence 9999999999999999999999964 5566677766
No 17
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=153.81 Aligned_cols=112 Identities=38% Similarity=0.548 Sum_probs=97.7
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEec---CCCCEEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQVF 335 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~v~ 335 (548)
+....+.|+|+|++|++|+.+|..|.+||||++++.+.....++|++++++.||+|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 445679999999999999999999999999999997544445799999999999999999998532 23578999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 336 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
|++.+++|++||++.+++.++..+.....|++|..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 99999999999999999999998888888998854
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=1.4e-18 Score=153.70 Aligned_cols=111 Identities=33% Similarity=0.434 Sum_probs=98.2
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d 336 (548)
+....+.|.|+|++|++|+..|..|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 4456799999999999999999899999999999965444467999999999999999999998632 35799999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
++.+++|++||++.++|.++..+.....|++|.
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999999999999999999999888888898874
No 19
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1.9e-18 Score=154.62 Aligned_cols=111 Identities=33% Similarity=0.434 Sum_probs=97.8
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFD 336 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d 336 (548)
+....+.|.|+|++|++|+..|..|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 4456799999999999999999999999999999975443457999999999999999999988642 35789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
+|.+++|++||++.+++.++..+.....|++|.
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 999999999999999999998888788888874
No 20
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.7e-18 Score=157.85 Aligned_cols=126 Identities=18% Similarity=0.262 Sum_probs=102.2
Q ss_pred CCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCCC
Q 008950 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (548)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 340 (548)
...+.|+|+|++|++|+..+..+.+||||+++++++ .++|+++++|+||+|||+|.|.+.. .+.|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~---~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQ---SKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTE---EEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCE---EeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 456899999999999994444455999999999873 4699999999999999999999853 78999999999999
Q ss_pred CCCCeeEEEEEECcccCCCC-----ceEEEEeccccccCCCCCCCccccEEEEEEEEEecc
Q 008950 341 GGHDRLGMQLVPLKLLTPHE-----TKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (548)
Q Consensus 341 ~~dd~lG~~~i~l~~l~~~~-----~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 396 (548)
++|++||++.+++.++..+. ....|++|... .......|+|++++.|.+..
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~-----~~~~~~~G~L~v~l~~l~~~ 163 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD-----KEPTETIGDLSICLDGLQLE 163 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES-----SCTTSEEEEEEEEEESEECC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC-----CCCCcccEEEEEEEeeeecc
Confidence 99999999999999986432 12457776542 11346789999999999873
No 21
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=2.8e-18 Score=150.04 Aligned_cols=109 Identities=25% Similarity=0.279 Sum_probs=94.4
Q ss_pred cCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEE-Eec--CCCCEEEEEE
Q 008950 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKE--PESQILQLQV 334 (548)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~-v~~--~~~~~L~v~v 334 (548)
....|.|.|+|++|+||+. +..|.+||||++++.+. ....++|+++++|+||+|||+|.|. +.. .....|.|+|
T Consensus 16 ~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 16 SYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp EEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred eecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 3456899999999999997 77899999999999543 3345799999999999999999999 753 2457999999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 335 FDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
||+|.+++|++||++.++++++..+.....|++|.
T Consensus 95 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 95 LSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp EECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred EECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 99999999999999999999999888888888874
No 22
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.76 E-value=4e-18 Score=149.44 Aligned_cols=117 Identities=21% Similarity=0.411 Sum_probs=102.3
Q ss_pred CceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeecc-CCCCCccCceEEEEccCCCCCCeEEEEEEEccCCcc
Q 008950 427 GAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIR 502 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~ 502 (548)
..|.|.|+|++|++|+.. +.+||||++++++++++|++++ ++.||+|||+|.|.+.+ ....|.|+|||++.
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~--~~~~l~~~V~d~~~--- 82 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE--GTTELKAKIFDKDV--- 82 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES--SCCEEEEEECCSSS---
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC--CCCEEEEEEEECCC---
Confidence 579999999999999873 5799999999999999999998 89999999999999987 35689999999984
Q ss_pred CCCCcceEEEEEechhhhcc-ceeceEEEeCCC--CCeEEEEEEEEEeC
Q 008950 503 FWSKESLGHVEINLTDVVHN-GRINEKYHLINS--KRGVIHVDIRWKMI 548 (548)
Q Consensus 503 ~~~d~~lG~~~i~L~~l~~~-~~~~~w~~L~~~--~~G~i~l~~~~~~~ 548 (548)
++.|++||++.++|.++... .....||+|... ..|+|+|+++|.|.
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred CCCCceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeC
Confidence 67899999999999999554 445789999632 47999999999983
No 23
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=7.2e-18 Score=148.21 Aligned_cols=112 Identities=25% Similarity=0.377 Sum_probs=94.3
Q ss_pred ccCCceEEEEEEEEecCccccCCC-CCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEE-EecC--CCCEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFL-GTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQV 334 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~-g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~v 334 (548)
+....+.|.|+|++|++|+.+|.. |.+||||++++.+.....++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 345679999999999999999985 899999999998644456899999999999999999996 5432 346899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCc-eEEEEeccc
Q 008950 335 FDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLK 370 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~l~~~~~-~~~~l~l~~ 370 (548)
||+|.+++|++||++.+++.++..+.. ...|.++.+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 999999999999999999999987643 456677743
No 24
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=2.3e-17 Score=144.97 Aligned_cols=121 Identities=16% Similarity=0.113 Sum_probs=102.0
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCCCCCCcEEEEEEcC--
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGENHNNPYAIILYKG-- 457 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~-- 457 (548)
....|+|++++.|.+. .+.|.|+|++|++....+.+||||++++..
T Consensus 9 ~~~~G~l~~sl~y~~~--------------------------------~~~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~ 56 (138)
T 1wfm_A 9 WNQAPKLHYCLDYDCQ--------------------------------KAELFVTRLEAVTSNHDGGCDCYVQGSVANRT 56 (138)
T ss_dssp CSSCCEEEEEEEEETT--------------------------------TTEEEEEEEEEECCCCSSCCCEEEEEEEEETT
T ss_pred CCcceEEEEEEEEeCC--------------------------------CCEEEEEEEEEEcCCCCCCcceEEEEEEEcCC
Confidence 4567999999999853 578999999999776677899999999942
Q ss_pred --eEEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEEeCCC
Q 008950 458 --DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINS 534 (548)
Q Consensus 458 --~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~ 534 (548)
..++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.|++||++.++|.++.......+||+|...
T Consensus 57 ~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~---~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 57 GSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR---FSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp EEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS---SCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC---CCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 24699999999999999999999875432 3589999999985 67899999999999998655666899999875
Q ss_pred C
Q 008950 535 K 535 (548)
Q Consensus 535 ~ 535 (548)
.
T Consensus 134 ~ 134 (138)
T 1wfm_A 134 G 134 (138)
T ss_dssp S
T ss_pred C
Confidence 4
No 25
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.75 E-value=7.3e-18 Score=150.92 Aligned_cols=124 Identities=18% Similarity=0.301 Sum_probs=101.6
Q ss_pred CCccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC--CCCCcEEEEEEc
Q 008950 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE--NHNNPYAIILYK 456 (548)
Q Consensus 379 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~--~~~dpyv~v~l~ 456 (548)
.....|++.+++.|.+. .+.|.|+|++|++|+.. +.+||||++++.
T Consensus 9 ~~~~~G~~~lsL~y~~~--------------------------------~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~ 56 (153)
T 3fbk_A 9 SHKVQGAGQLRLSIDAQ--------------------------------DRVLLLHIIEGKGLISKQPGTCDPYVKISLI 56 (153)
T ss_dssp ----CCCCEEEEEEEES--------------------------------SSEEEEEEEEEESCCCCSSSCCCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEECC--------------------------------CCEEEEEEEEeeCCCCCCCCCCCEEEEEEEE
Confidence 35678999999999974 68999999999999864 579999999993
Q ss_pred -----CeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCCccCCC-CcceEEEEEechhhhc-cceeceEE
Q 008950 457 -----GDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRFWS-KESLGHVEINLTDVVH-NGRINEKY 529 (548)
Q Consensus 457 -----~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~-d~~lG~~~i~L~~l~~-~~~~~~w~ 529 (548)
..+++|++++++.||+|||+|.|.+........|.|+|||++. ++. |++||++.++|.++.. +....+||
T Consensus 57 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~---~~~~d~~lG~~~i~l~~l~~~~~~~~~W~ 133 (153)
T 3fbk_A 57 PEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS---QSRQSGLIGCMSFGVKSLLTPDKEISGWY 133 (153)
T ss_dssp SCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS---SGGGCEEEEEEEEEHHHHTC--CCEEEEE
T ss_pred cCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC---CCCCCcEEEEEEEEHHHhcCCCCccccEE
Confidence 3457999999999999999999998543344579999999985 455 8999999999999985 56778999
Q ss_pred EeCCCCCe
Q 008950 530 HLINSKRG 537 (548)
Q Consensus 530 ~L~~~~~G 537 (548)
+|.+...|
T Consensus 134 ~L~~~~~g 141 (153)
T 3fbk_A 134 YLLGEHLG 141 (153)
T ss_dssp ECBCTTGG
T ss_pred ECCChhhc
Confidence 99886543
No 26
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.75 E-value=1.7e-17 Score=148.45 Aligned_cols=117 Identities=19% Similarity=0.371 Sum_probs=97.9
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC------eEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEE
Q 008950 426 SGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG------DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMS 496 (548)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d 496 (548)
...+.|+|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|.+... ...|.|+|||
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~l~~~V~d 94 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ--QHRLLFEVFD 94 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT--TCEEEEEEEE
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC--CCEEEEEEEE
Confidence 4579999999999999863 5789999999974 467999999999999999999999863 4689999999
Q ss_pred ccCCccCCCCcceEEEEEechhhhcccee------ceEEEeCCC-----CCeEEEEEEEEEe
Q 008950 497 KRTGIRFWSKESLGHVEINLTDVVHNGRI------NEKYHLINS-----KRGVIHVDIRWKM 547 (548)
Q Consensus 497 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~------~~w~~L~~~-----~~G~i~l~~~~~~ 547 (548)
++. ++.|++||++.++|.++...... .+||+|... ..|+|+|+++|.|
T Consensus 95 ~d~---~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENR---LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCS---SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCC---CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 985 67899999999999999775432 589999653 3799999999976
No 27
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.1e-17 Score=146.08 Aligned_cols=114 Identities=25% Similarity=0.445 Sum_probs=100.4
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCCcc
Q 008950 426 SGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIR 502 (548)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~ 502 (548)
...|.|.|+|++|++|+.. +.+||||++++++++++|++++++.||+|||+|.|.+.+. .+.|.++|||++.
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~--~~~l~i~V~d~d~--- 84 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI--HDVLEVTVFDEDG--- 84 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT--TCEEEEEEEEEET---
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC--CCEEEEEEEECCC---
Confidence 3579999999999999863 5799999999999999999999999999999999999864 4689999999985
Q ss_pred CCCCcceEEEEEechhhhccceeceEEEeCCC-----CCeEEEEEEEEE
Q 008950 503 FWSKESLGHVEINLTDVVHNGRINEKYHLINS-----KRGVIHVDIRWK 546 (548)
Q Consensus 503 ~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~ 546 (548)
.+.|++||++.++|.++..+. .+||+|.+. ..|+|+|+++|.
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEE
Confidence 567899999999999987644 589999753 479999999985
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=5.9e-18 Score=149.53 Aligned_cols=111 Identities=31% Similarity=0.442 Sum_probs=96.5
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEE-EecC--CCCEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLV-VKEP--ESQILQLQ 333 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~-v~~~--~~~~L~v~ 333 (548)
+....+.|.|+|++|++|+..+..|.+||||++++.+. ....++|++++++.||+|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 34567999999999999999999999999999999753 2345799999999999999999998 5421 13689999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 334 v~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
|||++..++|++||++.++++++..++.+.+|++|.
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~ 139 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLE 139 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECB
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEecc
Confidence 999999999999999999999999998889998874
No 29
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.74 E-value=3.6e-17 Score=145.54 Aligned_cols=117 Identities=24% Similarity=0.442 Sum_probs=99.5
Q ss_pred CCceEEEEEEeeeecCCCC---CCCCcEEEEEEcCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCC--
Q 008950 426 SGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTG-- 500 (548)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~-- 500 (548)
...|.|.|+|++|++|+.. +.+||||++++++..++|++++++.||.|||+|.|.+..+ .+.|.++|||++..
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~~~ 91 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS--SDRIKVRVLDEDDDIK 91 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST--TCEEEEEEEECCCSHH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC--CCEEEEEEEECCCCcc
Confidence 3579999999999999873 5799999999999999999999999999999999999875 36899999999841
Q ss_pred ------ccCCCCcceEEEEEechhhhccceeceEEEeCCC-----CCeEEEEEEEEE
Q 008950 501 ------IRFWSKESLGHVEINLTDVVHNGRINEKYHLINS-----KRGVIHVDIRWK 546 (548)
Q Consensus 501 ------~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~i~l~~~~~ 546 (548)
.+.+.|++||++.++|.++ .....+||+|... ..|+|+|++++.
T Consensus 92 ~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 0016799999999999998 3455799999843 369999999885
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.74 E-value=1.3e-17 Score=146.12 Aligned_cols=112 Identities=21% Similarity=0.344 Sum_probs=97.8
Q ss_pred ceEEEEEEeeeecCCCCC--------------CCCcEEEEEEcCeE-EEeeeccCCCCCccCceEEEEccCCCCCCeEEE
Q 008950 428 AGLLSVLVQGAEDVEGEN--------------HNNPYAIILYKGDK-KRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHI 492 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~--------------~~dpyv~v~l~~~~-~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v 492 (548)
.|.|+|+|++|++|+..+ .+||||++++++.. .+|+++++|.||+|||+|+|.+.+. +.|.+
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~---~~L~~ 81 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG---RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEEE
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC---CEEEE
Confidence 689999999999998531 28999999998876 5999999999999999999998764 68999
Q ss_pred EEEEccCCccCCCCcceEEEEEechhhhccc--eeceEEEeCCCCCeEEEEEEEEEe
Q 008950 493 EVMSKRTGIRFWSKESLGHVEINLTDVVHNG--RINEKYHLINSKRGVIHVDIRWKM 547 (548)
Q Consensus 493 ~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~--~~~~w~~L~~~~~G~i~l~~~~~~ 547 (548)
+|||++. ++.|++||++.++|.++..+. ..+.|++|. +.|+|+|+++|.+
T Consensus 82 ~V~d~d~---~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--~~G~i~l~l~~~~ 133 (136)
T 1gmi_A 82 AVFHDAP---IGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--PEGKVYVIIDLSG 133 (136)
T ss_dssp EEEECCS---SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--SSCEEEEEEEEEE
T ss_pred EEEeCCC---CCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--CCeEEEEEEEEEe
Confidence 9999984 678999999999999998753 458899987 4899999999975
No 31
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=9.2e-18 Score=148.03 Aligned_cols=122 Identities=25% Similarity=0.427 Sum_probs=101.8
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEE-
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY- 455 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l- 455 (548)
+...|+|++++.|.+. .+.|.|+|++|++|+.. +.+||||++++
T Consensus 4 ~~~~G~i~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 51 (141)
T 1v27_A 4 GSSGGQLSIKLWFDKV--------------------------------GHQLIVTILGAKDLPSREDGRPRNPYVKIYFL 51 (141)
T ss_dssp CCCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCCSSSCCCCEEEECCCS
T ss_pred CCcccEEEEEEEEeCC--------------------------------CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEe
Confidence 4568999999999863 57899999999999863 56899999999
Q ss_pred ----cCeEEEeeeccCCCCCccCceEEEEccCCC--CCCeEEEEEEEccCCccCCC--CcceEEEEEechhhhccceece
Q 008950 456 ----KGDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSKRTGIRFWS--KESLGHVEINLTDVVHNGRINE 527 (548)
Q Consensus 456 ----~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~~l~v~V~d~~~~~~~~~--d~~lG~~~i~L~~l~~~~~~~~ 527 (548)
....++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++. +++||++.++|.++.... ..+
T Consensus 52 ~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~---~~~~~~~~lG~~~i~l~~l~~~~-~~~ 127 (141)
T 1v27_A 52 PDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR---VREEESEFLGEILIELETALLDD-EPH 127 (141)
T ss_dssp SCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCS---SSSCCBCCCEEEEEEGGGCCCSS-EEE
T ss_pred cCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCC---CcCCCCceEEEEEEEccccCCCC-CCc
Confidence 345679999999999999999999953321 23589999999985 454 899999999999987655 689
Q ss_pred EEEeCCCCCe
Q 008950 528 KYHLINSKRG 537 (548)
Q Consensus 528 w~~L~~~~~G 537 (548)
||+|.+...|
T Consensus 128 W~~L~~~~~g 137 (141)
T 1v27_A 128 WYKLQTHDSG 137 (141)
T ss_dssp EEECBCCSSC
T ss_pred eEECcccccC
Confidence 9999877655
No 32
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=7.4e-18 Score=147.86 Aligned_cols=106 Identities=24% Similarity=0.443 Sum_probs=91.1
Q ss_pred ceEEEEEEeeeecCCCC---CCCCcEEEEEE-----cCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccC
Q 008950 428 AGLLSVLVQGAEDVEGE---NHNNPYAIILY-----KGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRT 499 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~---~~~dpyv~v~l-----~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~ 499 (548)
.+.|.|+|++|++|+.. +.+||||++++ +...++|++++++.||.|||+|.|.+........|.|+|||++.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 47899999999999863 57999999999 45678999999999999999999998764344589999999875
Q ss_pred CccCCCCcceEEEEEechhhhccceeceEEEeCCCCCe
Q 008950 500 GIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSKRG 537 (548)
Q Consensus 500 ~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G 537 (548)
.+.|++||++.++|+++..+. ..+||+|.+...|
T Consensus 95 ---~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g 128 (137)
T 3rdl_A 95 ---TTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEG 128 (137)
T ss_dssp ---SSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHH
T ss_pred ---CCCCceEEEEEEeHHHhccCc-cCceEECcCcccc
Confidence 678999999999999998766 6899999876544
No 33
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=148.63 Aligned_cols=121 Identities=21% Similarity=0.339 Sum_probs=103.0
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~----~~~~dpyv~v~l 455 (548)
...+|+|.+++.|.+. .+.|.|+|++|+||+. .+.+||||++++
T Consensus 6 ~~~~G~l~~sl~y~~~--------------------------------~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l 53 (148)
T 3fdw_A 6 IFVTGRIAFSLKYEQQ--------------------------------TQSLVVHVKECHQLAYADEAKKRSNPYVKTYL 53 (148)
T ss_dssp CCCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEE
T ss_pred CccceEEEEEEEEeCC--------------------------------CCEEEEEEEEecCCCCcccCCCCCCeEEEEEE
Confidence 4578999999999863 5899999999999985 357999999999
Q ss_pred c-----CeEEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEE
Q 008950 456 K-----GDKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKY 529 (548)
Q Consensus 456 ~-----~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~ 529 (548)
. ..+++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.|++||++.++|.++..+....+||
T Consensus 54 ~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~---~~~~~~iG~~~i~l~~l~~~~~~~~W~ 130 (148)
T 3fdw_A 54 LPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR---FGRNTFLGEAEIQMDSWKLDKKLDHCL 130 (148)
T ss_dssp ETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG---GGCEEEEEEEEEEHHHHHHHCCSEEEE
T ss_pred EcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC---CcCCcEEEEEEEEcccccccCCccceE
Confidence 6 346799999999999999999999876432 3479999999884 678999999999999998777778999
Q ss_pred EeCCCC
Q 008950 530 HLINSK 535 (548)
Q Consensus 530 ~L~~~~ 535 (548)
+|.+.+
T Consensus 131 ~L~~~~ 136 (148)
T 3fdw_A 131 PLHGKI 136 (148)
T ss_dssp ECBCC-
T ss_pred ECcCcc
Confidence 998753
No 34
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=145.43 Aligned_cols=121 Identities=23% Similarity=0.305 Sum_probs=102.1
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~ 456 (548)
....|+|++++.|.+. .+.|.|+|++|++|+.. +.+||||++++.
T Consensus 9 ~~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 56 (141)
T 2d8k_A 9 RENLGRIQFSVGYNFQ--------------------------------ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLL 56 (141)
T ss_dssp CCCCCEEEEEEEECSS--------------------------------SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEE
T ss_pred CceeeEEEEEEEEeCC--------------------------------CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEE
Confidence 4568999999999863 57899999999999873 579999999995
Q ss_pred ---CeEEEeeeccCCCCCccCceEEEEccCCC--CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEEe
Q 008950 457 ---GDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHL 531 (548)
Q Consensus 457 ---~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L 531 (548)
...++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++.|++||++.++|.++..+.....||+|
T Consensus 57 ~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~---~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 133 (141)
T 2d8k_A 57 PDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR---FSRNDPIGEVSIPLNKVDLTQMQTFWKDL 133 (141)
T ss_dssp SCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS---SSSCEEEEEEEEETTTSCTTSCEEEEECC
T ss_pred CCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC---CCCCcEEEEEEEEhhhhcCCCCccEEEEC
Confidence 35679999999999999999999853311 24589999999985 67899999999999999887777899999
Q ss_pred CCCC
Q 008950 532 INSK 535 (548)
Q Consensus 532 ~~~~ 535 (548)
...+
T Consensus 134 ~~~~ 137 (141)
T 2d8k_A 134 KPSG 137 (141)
T ss_dssp EECC
T ss_pred cCCC
Confidence 8654
No 35
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.3e-17 Score=149.23 Aligned_cols=120 Identities=22% Similarity=0.285 Sum_probs=102.0
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~ 456 (548)
....|+|++++.|.+. .+.|.|+|++|+||+.. +.+||||++++.
T Consensus 25 ~~~~G~l~~~l~y~~~--------------------------------~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 72 (152)
T 1rsy_A 25 EEKLGKLQYSLDYDFQ--------------------------------NNQLLVGIIQAAELPALDMGGTSDPYVKVFLL 72 (152)
T ss_dssp -CCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred CCCceEEEEEEEEeCC--------------------------------CCEEEEEEEEeECCCCccCCCCcCeEEEEEEE
Confidence 4567999999999863 57899999999999863 578999999994
Q ss_pred ---CeEEEeeeccCCCCCccCceEEEEccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEEeC
Q 008950 457 ---GDKKRTKMIRKTRDPAWNEEFQFMLDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLI 532 (548)
Q Consensus 457 ---~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~ 532 (548)
.+.++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++.|++||++.++|.++..+....+||+|.
T Consensus 73 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 73 PDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR---FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp TTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---SSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred cCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC---CCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 45679999999999999999999886421 23689999999985 678999999999999997777778999998
Q ss_pred CC
Q 008950 533 NS 534 (548)
Q Consensus 533 ~~ 534 (548)
+.
T Consensus 150 ~~ 151 (152)
T 1rsy_A 150 SA 151 (152)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 36
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=9.3e-18 Score=145.62 Aligned_cols=109 Identities=23% Similarity=0.343 Sum_probs=87.4
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEec---CCCCEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQ 333 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~ 333 (548)
+....|.|.|+|++|++|+.+|..|.+||||++++.+. ....++|++++++.||+|||+|.|.+.. .....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 44566999999999999999999999999999999542 2345799999999999999999999532 235799999
Q ss_pred EEEcCCCCC--CCeeEEEEEECcccCCCCceEEEEec
Q 008950 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDL 368 (548)
Q Consensus 334 v~d~d~~~~--dd~lG~~~i~l~~l~~~~~~~~~l~l 368 (548)
|||++..++ |++||++.+++.++.... ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999987654 5667665
No 37
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.6e-17 Score=146.04 Aligned_cols=109 Identities=21% Similarity=0.195 Sum_probs=92.2
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc-ccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE-KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVF 335 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~-~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~ 335 (548)
+....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 45567999999999993 677899999999999642 23347899999999999999999998643 2568999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 336 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
|+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999986667778888753
No 38
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=1.9e-17 Score=143.71 Aligned_cols=115 Identities=25% Similarity=0.439 Sum_probs=94.3
Q ss_pred cccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEE---
Q 008950 382 QRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY--- 455 (548)
Q Consensus 382 ~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l--- 455 (548)
..|+|.+++.|.+. .+.|.|+|++|+||+.. +.+||||++++
T Consensus 3 ~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~ 50 (129)
T 2bwq_A 3 LSGQLSIKLWFDKV--------------------------------GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD 50 (129)
T ss_dssp CCCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS
T ss_pred eeEEEEEEEEEccC--------------------------------CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC
Confidence 57999999999863 58999999999999873 46899999999
Q ss_pred --cCeEEEeeeccCCCCCccCceEEEEccCCC--CCCeEEEEEEEccCCccCCC--CcceEEEEEechhhhccceeceEE
Q 008950 456 --KGDKKRTKMIRKTRDPAWNEEFQFMLDEPP--LHEKIHIEVMSKRTGIRFWS--KESLGHVEINLTDVVHNGRINEKY 529 (548)
Q Consensus 456 --~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~~l~v~V~d~~~~~~~~~--d~~lG~~~i~L~~l~~~~~~~~w~ 529 (548)
+...++|++++++.||+|||+|.|.+.... ....|.|+|||++. .+. +++||++.++|.++...+ ..+||
T Consensus 51 ~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~---~~~~~~~~lG~~~i~l~~l~~~~-~~~W~ 126 (129)
T 2bwq_A 51 RSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR---VREEESEFLGEILIELETALLDD-EPHWY 126 (129)
T ss_dssp CSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC----------CEEEEEEEEEGGGCCCSS-CEEEE
T ss_pred CCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc---CcCcCCceeEEEEEEccccCCCc-CCccE
Confidence 456789999999999999999999963321 23589999999985 454 899999999999987755 68999
Q ss_pred EeC
Q 008950 530 HLI 532 (548)
Q Consensus 530 ~L~ 532 (548)
+|+
T Consensus 127 ~Lq 129 (129)
T 2bwq_A 127 KLQ 129 (129)
T ss_dssp ECC
T ss_pred ECc
Confidence 984
No 39
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=4.8e-18 Score=151.22 Aligned_cols=112 Identities=24% Similarity=0.351 Sum_probs=96.7
Q ss_pred ccCCceEEEEEEEEecCccccC-CCCCCCcEEEEEEcCcc--cceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQ 333 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d-~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~ 333 (548)
+....|.|.|+|++|++|+..| ..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4556799999999999999988 67999999999997543 3367999999999999999999998653 24579999
Q ss_pred EEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 334 VFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 334 v~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
|||+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 9999999999999999999999987767778888854
No 40
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=7.7e-18 Score=150.08 Aligned_cols=107 Identities=21% Similarity=0.463 Sum_probs=91.2
Q ss_pred eEEEEEEeeeecCCCC---CCCCcEEEEEEc-----CeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCC
Q 008950 429 GLLSVLVQGAEDVEGE---NHNNPYAIILYK-----GDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTG 500 (548)
Q Consensus 429 g~L~V~v~~a~~L~~~---~~~dpyv~v~l~-----~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~ 500 (548)
+.|.|+|++|++|+.. +.+||||++++. ...++|++++++.||+|||+|.|.+........|.|+|||++.
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~- 109 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL- 109 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS-
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC-
Confidence 6799999999999863 578999999997 3568999999999999999999999764334689999999985
Q ss_pred ccCCCCcceEEEEEechhhhccceeceEEEeCCCCCeEE
Q 008950 501 IRFWSKESLGHVEINLTDVVHNGRINEKYHLINSKRGVI 539 (548)
Q Consensus 501 ~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i 539 (548)
++.|++||++.++|.++..+. ..+||+|.+...|++
T Consensus 110 --~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 110 --TSRNDFMGSLSFGISELQKAG-VDGWFKLLSQEEGEY 145 (149)
T ss_dssp --SSCCEEEEEEEEEHHHHTTCC-EEEEEECBCHHHHTT
T ss_pred --CCCCCEEEEEEEEHHHhCcCc-cCCeEEccCCCCCcc
Confidence 678999999999999998764 679999987655543
No 41
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=7.3e-18 Score=149.88 Aligned_cols=111 Identities=27% Similarity=0.365 Sum_probs=93.4
Q ss_pred ccCCceEEEEEEEEecCcccc-CC------CCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC--CCCE
Q 008950 259 IKKPVGILHVKVVRASKLLKK-DF------LGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQI 329 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~-d~------~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~ 329 (548)
+....|.|.|+|++|++|+.. |. .|.+||||++++.+.....++|++++++.||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 455679999999999999984 43 35899999999986443457999999999999999999998632 2458
Q ss_pred EEEEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 330 LQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 330 L~v~v~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
|.|+|||++.+++|++||++.++|.++........|+.|.
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 9999999999999999999999999998776666777774
No 42
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.72 E-value=2.2e-16 Score=167.74 Aligned_cols=177 Identities=23% Similarity=0.312 Sum_probs=134.8
Q ss_pred eeEEEEEcCCCc-eEEEEEEEccccccc-cchhHHHHHHHHHHHhhhcccC-----Cceee-eeccc-------------
Q 008950 195 FATMVVSLMERP-HVDFGIKILGGDIMS-IPGLYQFIQKCITKYVAGIYIW-----PQTYE-IPILD------------- 253 (548)
Q Consensus 195 ~~~~~~~f~~~P-~id~~~~~~g~~~~~-~P~l~~~i~~~i~~~~~~~~v~-----P~~~~-~~l~~------------- 253 (548)
+..|.=|+...| -|+|.+.|+ .++.. -+-....++.++.+++.+.-.+ |-.-- .++..
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI-~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~~~l~g~~C~C~C~~~~~t 382 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPL-HTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQHKSSHDSCQCECQDSKVT 382 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEG-GGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTEEECSSCTTCEEESCTTTB
T ss_pred HHHHHHHHhhCCceEEEEEEEH-HHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCCccCCCCceEeeCCCCCCc
Confidence 455555666677 459999998 55543 4666789999999999987776 42111 11211
Q ss_pred -cccccccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEec-CCCCEEE
Q 008950 254 -ASSVAIKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKE-PESQILQ 331 (548)
Q Consensus 254 -~~~~~~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~-~~~~~L~ 331 (548)
....+.....|.|+|+|++|++|+. |..|++||||+++++++. ++|+++++++||+|||+|.|.+.+ ...+.|+
T Consensus 383 ~~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~ 458 (540)
T 3nsj_A 383 NQDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPLR 458 (540)
T ss_dssp CGGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCEE
T ss_pred ccccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEEE
Confidence 1112345568999999999999999 999999999999999754 799999999999999999998653 3578899
Q ss_pred EEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEE
Q 008950 332 LQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (548)
Q Consensus 332 v~v~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 393 (548)
|+|||+|..++||+||++.++|.. + .++.|..+ ..|.|+++++..
T Consensus 459 ~~V~D~D~~~~dD~LG~~~~~L~~---g-~~~~~~~l-------------~~G~l~~~~~~~ 503 (540)
T 3nsj_A 459 VQVWDADYGWDDDLLGSCDRSPHS---G-FHEVTCEL-------------NHGRVKFSYHAK 503 (540)
T ss_dssp EEEEECCSSSCCEEEEEEEECCCS---E-EEEEEEEC-------------SSSEEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEEEeeC---C-cEEEEEEc-------------CCeEEEEEEEEE
Confidence 999999999999999999999882 2 34556554 358888887644
No 43
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2.1e-17 Score=146.86 Aligned_cols=121 Identities=25% Similarity=0.278 Sum_probs=101.5
Q ss_pred CCccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC----------CCCC
Q 008950 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----------NHNN 448 (548)
Q Consensus 379 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~----------~~~d 448 (548)
.....|+|++++.|.+. .+.|.|+|++|+||+.. +.+|
T Consensus 8 ~~~~~G~l~~~l~y~~~--------------------------------~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~d 55 (147)
T 2enp_A 8 SKYQLGMLHFSTQYDLL--------------------------------HNHLTVRVIEARDLPPPISHDGSRQDMAHSN 55 (147)
T ss_dssp SCCCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEECCCCSCSSCCSSCTTCCCC
T ss_pred CCCcceEEEEEEEEcCC--------------------------------CCEEEEEEEEEeCCCCccccccccccCCCCC
Confidence 35678999999999864 58999999999999863 3699
Q ss_pred cEEEEEEcC---eEEEeeeccCCCCCccCceEEEEccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhccce
Q 008950 449 PYAIILYKG---DKKRTKMIRKTRDPAWNEEFQFMLDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGR 524 (548)
Q Consensus 449 pyv~v~l~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~ 524 (548)
|||++++.. ..++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++.+++||++.++|.++.....
T Consensus 56 pyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~---~~~~~~iG~~~i~l~~l~~~~~ 132 (147)
T 2enp_A 56 PYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDK---FSRHCVIGKVSVPLCEVDLVKG 132 (147)
T ss_dssp CEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCST---TCCSCCCEEEEEETTTSCTTTC
T ss_pred cEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCC---CcCCcEEEEEEEechhcCCCCC
Confidence 999999963 5679999999999999999999876421 12489999999985 6788999999999999977666
Q ss_pred eceEEEeCCC
Q 008950 525 INEKYHLINS 534 (548)
Q Consensus 525 ~~~w~~L~~~ 534 (548)
...||+|...
T Consensus 133 ~~~w~~L~~~ 142 (147)
T 2enp_A 133 GHWWKALIPS 142 (147)
T ss_dssp CCEEECCBCC
T ss_pred ccEEEEeecC
Confidence 6788888754
No 44
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.7e-17 Score=146.56 Aligned_cols=107 Identities=35% Similarity=0.501 Sum_probs=92.8
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcc--cceeeeeeecCCCCCeeeceEEEEEecCC-CCEEEEEEEEcCC
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWDK 339 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~v~d~d~ 339 (548)
.+.|.|+|++|++|+..|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.... ...|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 48899999999999999999999999999998532 33579999999999999999999987532 4689999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 340 ~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
.++|++||++.+++.++..+ ....|++|..
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 99999999999999999876 4667888743
No 45
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.72 E-value=9.5e-18 Score=150.19 Aligned_cols=129 Identities=22% Similarity=0.327 Sum_probs=101.7
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~ 456 (548)
....|+|.+++.|.|. .+.|.|+|++|+||+.. +.+||||++++.
T Consensus 13 ~~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~ 60 (153)
T 1w15_A 13 PSGRGELLVSLCYQST--------------------------------TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLY 60 (153)
T ss_dssp ---CCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCC------CCCEEEEEEEE
T ss_pred CccccEEEEEEEEcCC--------------------------------CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEE
Confidence 4578999999999974 58999999999999863 578999999994
Q ss_pred --Ce---EEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEE
Q 008950 457 --GD---KKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYH 530 (548)
Q Consensus 457 --~~---~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~ 530 (548)
+. +++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.|++||++.+++++ ......+||+
T Consensus 61 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~---~~~~~~lG~~~i~l~~--~~~~~~~W~~ 135 (153)
T 1w15_A 61 HAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER---GSRNEVIGRLVLGATA--EGSGGGHWKE 135 (153)
T ss_dssp ETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT---TSCCEEEEEEEESTTC--CSHHHHHHHH
T ss_pred eCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC---CCCCcEEEEEEECCCC--CchHHHHHHH
Confidence 33 5699999999999999999999876533 2589999999984 6789999999999988 3334567888
Q ss_pred eCCCCCeEEEEEEEEEeC
Q 008950 531 LINSKRGVIHVDIRWKMI 548 (548)
Q Consensus 531 L~~~~~G~i~l~~~~~~~ 548 (548)
|.+.+...+. +|+++
T Consensus 136 l~~~p~~~~~---~Wh~L 150 (153)
T 1w15_A 136 ICDFPRRQIA---KWHML 150 (153)
T ss_dssp HHHSTTCCEE---EEEEC
T ss_pred HHhCCCCeee---ecccc
Confidence 8776666555 77764
No 46
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.72 E-value=1.2e-17 Score=151.70 Aligned_cols=128 Identities=25% Similarity=0.435 Sum_probs=102.6
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~ 456 (548)
....|+|.+++.|.+. .+.|.|+|++|++|+.. +.+||||++++.
T Consensus 20 ~~~~G~l~~~l~y~~~--------------------------------~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~ 67 (166)
T 2cm5_A 20 IEERGKILVSLMYSTQ--------------------------------QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLK 67 (166)
T ss_dssp CCCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEE
T ss_pred cCccceEEEEEEEECC--------------------------------CCEEEEEEEEeECCCCccCCCCCCcEEEEEEE
Confidence 4578999999999863 57999999999999863 579999999997
Q ss_pred C-----eEEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEE
Q 008950 457 G-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYH 530 (548)
Q Consensus 457 ~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~ 530 (548)
+ ..++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.+++||++.+++.++.. ...+||+
T Consensus 68 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~~~~~~iG~~~i~l~~~~~--~~~~W~~ 142 (166)
T 2cm5_A 68 PDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI---GKSNDYIGGCQLGISAKGE--RLKHWYE 142 (166)
T ss_dssp TC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS---SSCCEEEEEEEEETTCCHH--HHHHHHH
T ss_pred CCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC---CCCCcEEEeEEEecccCCc--hhHHHHH
Confidence 6 56799999999999999999999865322 3589999999985 6789999999999998643 2345666
Q ss_pred eCCCCCeEEEEEEEEEe
Q 008950 531 LINSKRGVIHVDIRWKM 547 (548)
Q Consensus 531 L~~~~~G~i~l~~~~~~ 547 (548)
|.+.+++.+. +|++
T Consensus 143 l~~~~~~~~~---~Wh~ 156 (166)
T 2cm5_A 143 CLKNKDKKIE---RWHQ 156 (166)
T ss_dssp HHHCTTCCEE---EEEE
T ss_pred HHhCCCCcce---EeeE
Confidence 6655554444 5554
No 47
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=1.1e-17 Score=147.81 Aligned_cols=111 Identities=29% Similarity=0.306 Sum_probs=92.7
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcc--cceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v 334 (548)
+....+.|.|+|++|++|+.+|..| +||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 4456799999999999999999889 9999999996432 2457999999999999999999998532 245899999
Q ss_pred EEcCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 335 FDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 335 ~d~d~~~~--dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
||++.+++ |++||++.+++.++..+.....|++|..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 99998763 5799999999999987766667777753
No 48
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=5.9e-18 Score=149.52 Aligned_cols=107 Identities=28% Similarity=0.443 Sum_probs=92.7
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEEcCccc-----------ceeeeeeecCCCCCeeeceEEEE-Ee--cCCCC
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL-----------PWKKTTVKKKNLNPEWNENFKLV-VK--EPESQ 328 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~-----------~~~~T~v~~~t~nP~Wne~f~f~-v~--~~~~~ 328 (548)
.|.|.|+|++|++|+.+|..|.+||||++++.+... ..++|+++++|+||+|||+|.|. +. +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999999999999999987531 24689999999999999999997 53 22467
Q ss_pred EEEEEEEEcCCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 329 ILQLQVFDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 329 ~L~v~v~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
.|.|+|||+|.+++|++||++.++++++..+.....|++|.
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 137 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLK 137 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECB
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECC
Confidence 99999999999999999999999999998766667788874
No 49
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=1.9e-17 Score=145.22 Aligned_cols=108 Identities=32% Similarity=0.494 Sum_probs=93.0
Q ss_pred CceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEecCC-CCEEEEEEEEcC
Q 008950 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWD 338 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~v~d~d 338 (548)
..|.|.|+|++|++|+..|..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 35999999999999999999999999999999543 234579999999999999999999986532 358999999999
Q ss_pred CCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 339 KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 339 ~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
..++|++||++.++++++..+. ...|++|..
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9999999999999999997665 677888753
No 50
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.72 E-value=3.7e-17 Score=144.58 Aligned_cols=118 Identities=23% Similarity=0.307 Sum_probs=101.5
Q ss_pred ccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEE--
Q 008950 381 KQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY-- 455 (548)
Q Consensus 381 ~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l-- 455 (548)
...|+|++++.|.+. .+.|.|+|++|++|+.. +.+||||++++
T Consensus 18 ~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~ 65 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQ--------------------------------NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP 65 (143)
T ss_dssp CCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEES
T ss_pred cCeEEEEEEEEEeCC--------------------------------CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEEC
Confidence 467999999999863 58999999999999873 57999999999
Q ss_pred -cCeEEEeeeccCCCCCccCceEEEEccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEEeCC
Q 008950 456 -KGDKKRTKMIRKTRDPAWNEEFQFMLDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLIN 533 (548)
Q Consensus 456 -~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~ 533 (548)
+.+.++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++.|++||++.++|.++..+....+||+|..
T Consensus 66 ~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 66 DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR---FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC---CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 445789999999999999999999986431 23589999999985 6789999999999999988777789999974
No 51
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=2.1e-17 Score=150.79 Aligned_cols=108 Identities=26% Similarity=0.361 Sum_probs=94.2
Q ss_pred CceEEEEEEEEecCccccCC-CCCCCcEEEEEEcCcc--cceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEE-Ec
Q 008950 262 PVGILHVKVVRASKLLKKDF-LGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVF-DW 337 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~-~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~-d~ 337 (548)
..|.|.|+|++|++|+.+|. .|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 46899999999999999985 6999999999997542 235799999999999999999999854 5689999999 99
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 338 d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
|.+++|++||++.+++.++..+.....|++|..
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~ 139 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFP 139 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBC
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCC
Confidence 999999999999999999998878888998854
No 52
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.71 E-value=6.5e-17 Score=148.28 Aligned_cols=116 Identities=20% Similarity=0.358 Sum_probs=95.2
Q ss_pred CceEEEEEEeeeecCCC---CCCCCcEEEEEEcC------eEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEc
Q 008950 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKG------DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK 497 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~---~~~~dpyv~v~l~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~ 497 (548)
..|.|+|+|++|++|+. .+.+||||++++++ ..++|++++++.||.|||.|.|.+... ...|.|+|||+
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~--~~~L~~~V~d~ 83 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ--RHRILFEVFDE 83 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT--TCEEEEEEEEC
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC--CCEEEEEEEEC
Confidence 47999999999999986 35799999999976 567999999999999999999999853 46899999999
Q ss_pred cCCccCCCCcceEEEEEechhhhcccee-c-----eEEEeCCC-----CCeEEEEEEEEEe
Q 008950 498 RTGIRFWSKESLGHVEINLTDVVHNGRI-N-----EKYHLINS-----KRGVIHVDIRWKM 547 (548)
Q Consensus 498 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~-~-----~w~~L~~~-----~~G~i~l~~~~~~ 547 (548)
+. ++.|++||++.++|.++...... . +||+|... ..|.|+|++.|.|
T Consensus 84 d~---~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 84 NR---LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp C-------CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CC---CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEe
Confidence 85 67899999999999999876432 2 79999753 2799999999987
No 53
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=2e-17 Score=145.80 Aligned_cols=111 Identities=23% Similarity=0.339 Sum_probs=93.2
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcc--cceeeeeeecCCCCCeeeceEEEEEec---CCCCEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKE---PESQILQLQ 333 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~---~~~~~L~v~ 333 (548)
+....+.|.|+|++|++|+.+|..|.+||||++++.+.. ...++|++++++.||+|||+|.|.+.. .....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 344569999999999999999999999999999995422 335799999999999999999999532 235799999
Q ss_pred EEEcCCCCC--CCeeEEEEEECcccCCCCceEEEEeccc
Q 008950 334 VFDWDKVGG--HDRLGMQLVPLKLLTPHETKEFTLDLLK 370 (548)
Q Consensus 334 v~d~d~~~~--dd~lG~~~i~l~~l~~~~~~~~~l~l~~ 370 (548)
|||++..++ |++||++.+++.++.... ...|++|..
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 999999887 999999999999987654 677888754
No 54
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=148.98 Aligned_cols=118 Identities=17% Similarity=0.268 Sum_probs=98.7
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCC---CCCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~---~~~~dpyv~v~l~ 456 (548)
....|+|++++.|.+. .+.|.|+|++|+||+. .+.+||||++++.
T Consensus 26 ~~~~G~l~~sl~y~~~--------------------------------~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~ 73 (155)
T 2z0u_A 26 AVGATRIQIALKYDEK--------------------------------NKQFAILIIQLSNLSALLQQQDQKVNIRVAVL 73 (155)
T ss_dssp --CCEEEEEEEEEETT--------------------------------TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEE
T ss_pred cCCcEEEEEEEEEcCC--------------------------------CCEEEEEEEEccCcCCcccCCCCCEEEEEEEe
Confidence 3567999999999863 5799999999999986 3679999999996
Q ss_pred C---e---EEEeeeccCCCCCccCceEEEEccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhc-cceeceE
Q 008950 457 G---D---KKRTKMIRKTRDPAWNEEFQFMLDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVH-NGRINEK 528 (548)
Q Consensus 457 ~---~---~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~-~~~~~~w 528 (548)
+ . ++||+++++|.||+|||+|.|.+.... ....|.|+|||++. ++.+++||++.++|.++.. .....+|
T Consensus 74 ~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~---~~~~d~iG~~~i~l~~l~~~~~~~~~W 150 (155)
T 2z0u_A 74 PCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR---SHLEECLGGAQISLAEVCRSGERSTRW 150 (155)
T ss_dssp SCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT---TSCEEEEEEEEEECTTSCTTCCCEEEE
T ss_pred cCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC---CCCCcEEEEEEEEHHHccCCCCccccc
Confidence 5 2 689999999999999999999986421 13579999999985 6789999999999999953 4566899
Q ss_pred EEeC
Q 008950 529 YHLI 532 (548)
Q Consensus 529 ~~L~ 532 (548)
|+|.
T Consensus 151 ~~L~ 154 (155)
T 2z0u_A 151 YNLL 154 (155)
T ss_dssp EEEB
T ss_pred eEcc
Confidence 9986
No 55
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.71 E-value=7.8e-17 Score=140.76 Aligned_cols=107 Identities=24% Similarity=0.384 Sum_probs=88.8
Q ss_pred ceEEEEEEeeeecCCC--CCCCCcEEEEEE-----cCeEEEeeeccCCCCCccCceEEEE-ccCCC-CCCeEEEEEEEcc
Q 008950 428 AGLLSVLVQGAEDVEG--ENHNNPYAIILY-----KGDKKRTKMIRKTRDPAWNEEFQFM-LDEPP-LHEKIHIEVMSKR 498 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~--~~~~dpyv~v~l-----~~~~~kT~v~~~t~nP~wne~f~f~-v~~~~-~~~~l~v~V~d~~ 498 (548)
.+.|.|+|++|+||+. .+.+||||++++ ...+++|++++++.||+|||+|.|. +.... ....|.|+|||++
T Consensus 19 ~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 5789999999999986 357999999999 3456799999999999999999999 65321 2358999999998
Q ss_pred CCccCCCCcceEEEEEechhhhccceeceEEEeCCCCCe
Q 008950 499 TGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSKRG 537 (548)
Q Consensus 499 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G 537 (548)
. ++.+++||++.++|+++..+....+||+|.+.+.|
T Consensus 99 ~---~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 99 S---LRENFFLGGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp S---SSCCEEEEEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred C---CCCCcEEEEEEEEhhhccCCCCcceeEECCCccCC
Confidence 5 67889999999999999887777899999876543
No 56
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=4.6e-17 Score=145.69 Aligned_cols=111 Identities=26% Similarity=0.362 Sum_probs=93.4
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEecC-CCCEEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP-ESQILQLQVF 335 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~-~~~~L~v~v~ 335 (548)
+....|.|.|+|++|++|+..| .|.+||||++++.+. ....++|+++++|.||+|||+|.|.+... ....|.|+||
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 4556799999999999999998 699999999999543 23457999999999999999999998422 2356999999
Q ss_pred EcCCCCC-CCeeEEEEEECcccCC-CCceEEEEeccc
Q 008950 336 DWDKVGG-HDRLGMQLVPLKLLTP-HETKEFTLDLLK 370 (548)
Q Consensus 336 d~d~~~~-dd~lG~~~i~l~~l~~-~~~~~~~l~l~~ 370 (548)
|++.+++ |++||++.+++.++.. +.....|++|..
T Consensus 101 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 101 NRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp ECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred eCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 9998876 8999999999999984 667778888854
No 57
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.70 E-value=1.4e-17 Score=146.25 Aligned_cols=126 Identities=22% Similarity=0.419 Sum_probs=102.4
Q ss_pred ccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC--
Q 008950 383 RGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG-- 457 (548)
Q Consensus 383 ~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~-- 457 (548)
+|+|.+++.|.+. .+.|.|+|++|++|+.. +.+||||++++.+
T Consensus 2 ~G~l~~sl~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~ 49 (138)
T 3n5a_A 2 RGELLLSLCYNPS--------------------------------ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKD 49 (138)
T ss_dssp CCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETT
T ss_pred CcEEEEEEEEcCC--------------------------------CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCC
Confidence 6999999999863 58999999999999873 5789999999964
Q ss_pred ---eEEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEEeCC
Q 008950 458 ---DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLIN 533 (548)
Q Consensus 458 ---~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~ 533 (548)
.+++|++++++.||+|||+|.|.+..... ...|.++|||++. ++.|++||++.++|.++.. ...+|++|.+
T Consensus 50 ~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~---~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~ 124 (138)
T 3n5a_A 50 KRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK---LSRNDVIGKIYLSWKSGPG--EVKHWKDMIA 124 (138)
T ss_dssp EEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS---SSCCEEEEEEEESSSSCHH--HHHHHHHHHH
T ss_pred CccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC---CCCCcEEEEEEEccccCCh--HHHHHHHHHh
Confidence 35699999999999999999999876422 2479999999985 6789999999999987533 3357888877
Q ss_pred CCCeEEEEEEEEEeC
Q 008950 534 SKRGVIHVDIRWKMI 548 (548)
Q Consensus 534 ~~~G~i~l~~~~~~~ 548 (548)
.++..+. +|+++
T Consensus 125 ~~~~~~~---~Wh~L 136 (138)
T 3n5a_A 125 RPRQPVA---QWHQL 136 (138)
T ss_dssp STTCCEE---EEEEC
T ss_pred CCCCeEE---EEeec
Confidence 6665555 67664
No 58
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=1.1e-16 Score=144.18 Aligned_cols=98 Identities=38% Similarity=0.544 Sum_probs=85.4
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v 334 (548)
+....|.|.|+|++|+||+..|..|.+||||++++.+. ....++|+++++++||+|||+|.|.+... ....|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 44567999999999999999999999999999999743 23457999999999999999999998643 246899999
Q ss_pred EEcCCCCCCCeeEEEEEECccc
Q 008950 335 FDWDKVGGHDRLGMQLVPLKLL 356 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~l 356 (548)
||+|.+++|++||++.+++..+
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCC
T ss_pred EECCCCCCCceEEEEEECCCCC
Confidence 9999999999999999999864
No 59
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=7.8e-17 Score=141.45 Aligned_cols=99 Identities=32% Similarity=0.460 Sum_probs=86.0
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEecCC--CCEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v 334 (548)
+....|.|.|+|++|++|+..|..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 34567999999999999999999999999999999753 233578999999999999999999986432 36899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccC
Q 008950 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~l~ 357 (548)
||+|..++|++||++.+++.++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999999754
No 60
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=4.3e-17 Score=143.93 Aligned_cols=121 Identities=19% Similarity=0.347 Sum_probs=100.1
Q ss_pred CCccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCC---CCCCCcEEEEEE
Q 008950 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG---ENHNNPYAIILY 455 (548)
Q Consensus 379 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~---~~~~dpyv~v~l 455 (548)
.....|+|++++.|.+. .+.|.|+|++|+||+. .+ +||||++++
T Consensus 6 ~~~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l 52 (142)
T 2dmg_A 6 SGSPLGQIQLTIRHSSQ--------------------------------RNKLIVVVHACRNLIAFSEDG-SDPYVRMYL 52 (142)
T ss_dssp CSCSSCEEEEEEEEETT--------------------------------TTEEEEEEEEEECCCCSSTTC-CCEEEEEEE
T ss_pred CCCCcceEEEEEEEeCC--------------------------------CCEEEEEEEEeECCCCCCCCC-CCeeEEEEE
Confidence 34678999999999863 5789999999999986 35 999999999
Q ss_pred cC-----eEEEeeeccCCCCCccCceEEEEccCCC-CCCeEEEEEEEccCCccCC--CCcceEEEEEechhhhccceece
Q 008950 456 KG-----DKKRTKMIRKTRDPAWNEEFQFMLDEPP-LHEKIHIEVMSKRTGIRFW--SKESLGHVEINLTDVVHNGRINE 527 (548)
Q Consensus 456 ~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~--~d~~lG~~~i~L~~l~~~~~~~~ 527 (548)
.. .+++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++ .|++||++.++|.++.......+
T Consensus 53 ~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~~~~~~~~iG~~~i~l~~~~~~~~~~~ 129 (142)
T 2dmg_A 53 LPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG---FLSKDKGLLGKVLVALASEELAKGWTQ 129 (142)
T ss_dssp ESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC---SSCCSCCCCEEEEEECCCSTTTTCBCC
T ss_pred EcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC---ccccCCcEEEEEEEecccccccccccc
Confidence 43 5679999999999999999999985421 12489999999985 43 35799999999999877667789
Q ss_pred EEEeCCCC
Q 008950 528 KYHLINSK 535 (548)
Q Consensus 528 w~~L~~~~ 535 (548)
||+|.+.+
T Consensus 130 W~~L~~~~ 137 (142)
T 2dmg_A 130 WYDLTEDS 137 (142)
T ss_dssp BCCCBCSC
T ss_pred eeeccCCC
Confidence 99998753
No 61
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=2.1e-17 Score=145.95 Aligned_cols=120 Identities=22% Similarity=0.402 Sum_probs=99.8
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~ 456 (548)
....|+|++++.|. .|.|.|+|++|++|+.. +.+||||++++.
T Consensus 3 ~~~~G~i~~~l~y~----------------------------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~ 48 (142)
T 1rh8_A 3 HPITGEIQLQINYD----------------------------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLL 48 (142)
T ss_dssp CCCCCEEEEEEEEE----------------------------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEET
T ss_pred CCcceEEEEEEEEc----------------------------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEe
Confidence 34689999999887 26899999999999873 578999999997
Q ss_pred Ce--------------EEEeeeccCCCCCccCceEEEE-ccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhh
Q 008950 457 GD--------------KKRTKMIRKTRDPAWNEEFQFM-LDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVV 520 (548)
Q Consensus 457 ~~--------------~~kT~v~~~t~nP~wne~f~f~-v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~ 520 (548)
+. .++|++++++.||+|||+|.|. +.... ....|.|+|||++. ++.|++||++.++|.++.
T Consensus 49 ~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~---~~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 49 PGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR---FSSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp TSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECS---SSCEEEEEEEEEETTSCG
T ss_pred cCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCC---CCCCceEEEEEEeccccc
Confidence 63 3689999999999999999997 43211 24589999999985 678899999999999998
Q ss_pred ccceeceEEEeCCCCC
Q 008950 521 HNGRINEKYHLINSKR 536 (548)
Q Consensus 521 ~~~~~~~w~~L~~~~~ 536 (548)
......+||+|.+...
T Consensus 126 ~~~~~~~W~~L~~~~~ 141 (142)
T 1rh8_A 126 HLDNTPRWYPLKEQTE 141 (142)
T ss_dssp GGTTCCEEEECBCCCC
T ss_pred cCCCCCeEEECCccCC
Confidence 7666789999987643
No 62
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=3.1e-16 Score=137.73 Aligned_cols=121 Identities=21% Similarity=0.337 Sum_probs=99.9
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC----CCCCcEEEEEE
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE----NHNNPYAIILY 455 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~----~~~dpyv~v~l 455 (548)
....|+|.+++.|.+. .+.|.|+|++|+||+.. +.+||||++++
T Consensus 5 ~~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~ 52 (138)
T 1ugk_A 5 SSGLGTLFFSLEYNFE--------------------------------RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTI 52 (138)
T ss_dssp CCCCCEEEEEEEEEGG--------------------------------GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEE
T ss_pred CCccEEEEEEEEEECC--------------------------------CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEE
Confidence 4568999999999864 57899999999999863 56899999999
Q ss_pred cC---eEEEeeeccCCCCCccCceEEEE-ccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhccc-eeceEE
Q 008950 456 KG---DKKRTKMIRKTRDPAWNEEFQFM-LDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNG-RINEKY 529 (548)
Q Consensus 456 ~~---~~~kT~v~~~t~nP~wne~f~f~-v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~-~~~~w~ 529 (548)
.+ ..++|++++++.||+|||+|.|. +.... ....|.|+|||++. ++.|++||++.++|.++..+. ....|+
T Consensus 53 ~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~---~~~~~~lG~~~i~l~~l~~~~~~~~~~~ 129 (138)
T 1ugk_A 53 LPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR---FSRDDIIGEVLIPLSGIELSEGKMLMNR 129 (138)
T ss_dssp ETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS---SCCCCCCEEEEEECTTCCCTTCCEEEEE
T ss_pred ecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC---CCCCcEEEEEEEehhHccCCCCcchhhh
Confidence 63 67899999999999999999995 55422 23589999999985 678999999999999997754 345678
Q ss_pred EeCCCC
Q 008950 530 HLINSK 535 (548)
Q Consensus 530 ~L~~~~ 535 (548)
+|...+
T Consensus 130 ~l~~~~ 135 (138)
T 1ugk_A 130 EIISGP 135 (138)
T ss_dssp ECBSSS
T ss_pred hhhcCC
Confidence 887653
No 63
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.69 E-value=2.4e-16 Score=142.01 Aligned_cols=121 Identities=24% Similarity=0.402 Sum_probs=99.1
Q ss_pred CCccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEE
Q 008950 379 DMKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY 455 (548)
Q Consensus 379 ~~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l 455 (548)
.....|+|++++.|.+. .+.|.|+|++|+||+.. +.+||||++++
T Consensus 7 ~~~~~G~l~~~l~y~~~--------------------------------~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l 54 (159)
T 1tjx_A 7 ILEKLGDICFSLRYVPT--------------------------------AGKLTVVILEAKNLKKMDVGGLSDPYVKIHL 54 (159)
T ss_dssp GGGCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEE
T ss_pred CcCcCCeEEEEEEEcCC--------------------------------CCEEEEEEEEeeCCCCccCCCCCCeEEEEEE
Confidence 34578999999999974 57999999999999863 57899999999
Q ss_pred cC-----eEEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechh----------h
Q 008950 456 KG-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTD----------V 519 (548)
Q Consensus 456 ~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~----------l 519 (548)
.+ ..++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.|++||++.+++.. +
T Consensus 55 ~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~---~~~~~~iG~~~i~l~~~~~~~~~w~~l 131 (159)
T 1tjx_A 55 MQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK---IGKNDAIGKVFVGYNSTGAELRHWSDM 131 (159)
T ss_dssp EETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS---SSCCEEEEEEEEETTCCHHHHHHHHHH
T ss_pred EeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC---CCCCceEEEEEECCCCCCcHHHHHHHH
Confidence 63 35699999999999999999999865322 3479999999985 6789999999999984 3
Q ss_pred hcc--ceeceEEEeCCC
Q 008950 520 VHN--GRINEKYHLINS 534 (548)
Q Consensus 520 ~~~--~~~~~w~~L~~~ 534 (548)
+.. ....+||+|...
T Consensus 132 ~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 132 LANPRRPIAQWHTLQVE 148 (159)
T ss_dssp HHSTTCCEEEEEECBCH
T ss_pred HHCCCCeeeeEEECcCc
Confidence 332 356789998764
No 64
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.69 E-value=2.9e-16 Score=136.72 Aligned_cols=113 Identities=20% Similarity=0.364 Sum_probs=94.6
Q ss_pred ceEEEEEEeeeecCCCC---CCCCcEEEEEEcC--eEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCCcc
Q 008950 428 AGLLSVLVQGAEDVEGE---NHNNPYAIILYKG--DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIR 502 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~ 502 (548)
...|+|+|++|++|+.. +.+||||++++++ +.++|++++++.||+|||+|.|.+... +.|.++|||++.
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~--- 77 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKK--- 77 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGG---
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCC---
Confidence 46799999999999763 5799999999975 678999999999999999999999774 359999999985
Q ss_pred CCC---CcceEEEEEechhhhc-cceeceEEEeCCC-------CCeEEEEEEEEE
Q 008950 503 FWS---KESLGHVEINLTDVVH-NGRINEKYHLINS-------KRGVIHVDIRWK 546 (548)
Q Consensus 503 ~~~---d~~lG~~~i~L~~l~~-~~~~~~w~~L~~~-------~~G~i~l~~~~~ 546 (548)
++. |++||++.++++++.. .....+|++|... ..|+|++++++|
T Consensus 78 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 78 IHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp TTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred CCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 443 8999999999999843 3344689999754 279999999875
No 65
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.69 E-value=1.4e-16 Score=138.34 Aligned_cols=89 Identities=19% Similarity=0.295 Sum_probs=74.3
Q ss_pred CCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeee-cCCCCCeeeceEEEEEecCCCCEEEEEEEEcCC
Q 008950 261 KPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVK-KKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (548)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~-~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (548)
+++|.|.|+|++|+++.. .|.+||||+++ . +. .+|+++ .++.||+|||+|.|.+.+. ...|.|+|||+|
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d- 71 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG- 71 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-
Confidence 457999999999998853 57899999999 2 22 245544 4799999999999999764 467999999999
Q ss_pred CCCCCeeEEEEEECcccCCC
Q 008950 340 VGGHDRLGMQLVPLKLLTPH 359 (548)
Q Consensus 340 ~~~dd~lG~~~i~l~~l~~~ 359 (548)
.++|++||++.++|+++...
T Consensus 72 ~~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCBC
T ss_pred CCCCCeEEEEEEEHHHhhhc
Confidence 88999999999999998644
No 66
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=2.4e-16 Score=143.09 Aligned_cols=99 Identities=33% Similarity=0.441 Sum_probs=86.7
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcc--cceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK--LPWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQV 334 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v 334 (548)
+....+.|.|+|++|++|+..|..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 455679999999999999999999999999999998632 3457999999999999999999998643 256899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccC
Q 008950 335 FDWDKVGGHDRLGMQLVPLKLLT 357 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~l~ 357 (548)
||++.+++|++||++.+++.++.
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCH
T ss_pred EECCCCCCCcEEEeEEEecccCC
Confidence 99999999999999999999863
No 67
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.68 E-value=1.3e-16 Score=140.79 Aligned_cols=119 Identities=25% Similarity=0.387 Sum_probs=98.5
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEc
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYK 456 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~ 456 (548)
....|+|.+++.|.+. .+.|.|+|++|++|+.. +.+||||++++.
T Consensus 12 ~~~~G~l~~~l~y~~~--------------------------------~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~ 59 (142)
T 2chd_A 12 ATTLGALEFSLLYDQD--------------------------------NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLL 59 (142)
T ss_dssp --CCCEEEEEEEEEGG--------------------------------GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEE
T ss_pred CCccceEEEEEEEeCC--------------------------------CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEE
Confidence 4578999999999863 58999999999999873 578999999997
Q ss_pred C-----eEEEeeeccCCCCCccCceEEEE-ccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEE
Q 008950 457 G-----DKKRTKMIRKTRDPAWNEEFQFM-LDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKY 529 (548)
Q Consensus 457 ~-----~~~kT~v~~~t~nP~wne~f~f~-v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~ 529 (548)
+ ..++|++++++.||+|||+|.|. +..... ...|.|+|||++. ++.|++||++.++|.++..+....-|+
T Consensus 60 ~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~---~~~d~~iG~~~i~l~~l~~~~~~~~~~ 136 (142)
T 2chd_A 60 PGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK---FGHNEFIGETRFSLKKLKANQRKNFNI 136 (142)
T ss_dssp SCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT---TSCEEEEEEEEEEGGGCCTTCCEEEEE
T ss_pred cCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC---CCCCcEEEEEEEEHHHcCCCCccEEEE
Confidence 5 67899999999999999999998 432111 2589999999985 677899999999999998777666677
Q ss_pred EeCC
Q 008950 530 HLIN 533 (548)
Q Consensus 530 ~L~~ 533 (548)
+|..
T Consensus 137 ~L~~ 140 (142)
T 2chd_A 137 CLER 140 (142)
T ss_dssp ECBC
T ss_pred eccc
Confidence 7764
No 68
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=1e-16 Score=143.41 Aligned_cols=97 Identities=29% Similarity=0.374 Sum_probs=79.4
Q ss_pred ccCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEecCC--CCEEEEEE
Q 008950 259 IKKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE--SQILQLQV 334 (548)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~--~~~L~v~v 334 (548)
+....+.|.|+|++|++|+..|..|.+||||++++.+. ....++|+++++++||+|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 44567999999999999999998999999999999543 333579999999999999999999987542 46899999
Q ss_pred EEcCCCCCCCeeEEEEEECcc
Q 008950 335 FDWDKVGGHDRLGMQLVPLKL 355 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~ 355 (548)
||+|.+++|++||++.+++++
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 69
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.67 E-value=3.7e-16 Score=142.36 Aligned_cols=116 Identities=19% Similarity=0.302 Sum_probs=98.8
Q ss_pred CceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCCccC
Q 008950 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRF 503 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~---~~~~dpyv~v~l~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~~ 503 (548)
..+.|.|+|++|++|+. .+.+||||+++++++.++|++++++.||+|||+|.|.+.. .+.|.|+|||++. +
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~---~ 107 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQT---L 107 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCS---S
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCC---C
Confidence 56889999999999983 2359999999999988999999999999999999999853 5689999999985 6
Q ss_pred CCCcceEEEEEechhhhccc--e---eceEEEeCCC-----CCeEEEEEEEEEeC
Q 008950 504 WSKESLGHVEINLTDVVHNG--R---INEKYHLINS-----KRGVIHVDIRWKMI 548 (548)
Q Consensus 504 ~~d~~lG~~~i~L~~l~~~~--~---~~~w~~L~~~-----~~G~i~l~~~~~~~ 548 (548)
+.|++||++.++|.++.... . ...|++|... ..|+|.+.+.+.++
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 78999999999999997632 1 2569999764 37999999988764
No 70
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=6.2e-16 Score=153.01 Aligned_cols=132 Identities=23% Similarity=0.310 Sum_probs=112.8
Q ss_pred ccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEEcC
Q 008950 381 KQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILYKG 457 (548)
Q Consensus 381 ~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l~~ 457 (548)
...|+|++++.|.+. .+.|.|+|++|++|+.. +.+||||++++++
T Consensus 3 ~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~ 50 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQ--------------------------------NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLP 50 (284)
T ss_dssp CCCCEEEEEEEEETT--------------------------------TTEEEEEEEEEECCCCCSSSSSCCEEEEEEEET
T ss_pred cceeEEEEEEEEECC--------------------------------CCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEc
Confidence 457999999999863 58999999999999863 5799999999964
Q ss_pred ---eEEEeeeccCCCCCccCceEEEEccCCC-CCCeEEEEEEEccCCccCCCCcceEEEEEechhhhccceeceEEEeCC
Q 008950 458 ---DKKRTKMIRKTRDPAWNEEFQFMLDEPP-LHEKIHIEVMSKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLIN 533 (548)
Q Consensus 458 ---~~~kT~v~~~t~nP~wne~f~f~v~~~~-~~~~l~v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~ 533 (548)
+.++|++++++.||+|||+|.|.+.... ....|.|+|||++. ++.|++||++.++|.++..+....+||+|.+
T Consensus 51 ~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~---~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~ 127 (284)
T 2r83_A 51 DKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR---FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 127 (284)
T ss_dssp CTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS---SSCCCEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC---CCCCceeEEEEEcchhcccCCcceeEEEeec
Confidence 4679999999999999999999986532 23689999999984 6789999999999999988777889999975
Q ss_pred C------CCeEEEEEEEEEe
Q 008950 534 S------KRGVIHVDIRWKM 547 (548)
Q Consensus 534 ~------~~G~i~l~~~~~~ 547 (548)
. ..|+|.+++++.|
T Consensus 128 ~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 128 AEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp CSSCCCCCCCEEEEEEEEET
T ss_pred cccccccccccEEEEEEecC
Confidence 3 3699999998864
No 71
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.67 E-value=2.8e-16 Score=143.22 Aligned_cols=116 Identities=22% Similarity=0.274 Sum_probs=98.2
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCC----CCCCCcEEEEEE
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEG----ENHNNPYAIILY 455 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~----~~~~dpyv~v~l 455 (548)
....|+|++.+.|. .+.|.|+|++|+||+. .+.+||||++++
T Consensus 15 ~~~~G~l~~~l~y~----------------------------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l 60 (171)
T 2q3x_A 15 TPAMGDIQIGMEDK----------------------------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYL 60 (171)
T ss_dssp --CCCEEEEEEEEE----------------------------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEE
T ss_pred CCCccEEEEEEEEC----------------------------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEE
Confidence 34679999999982 4789999999999985 357899999998
Q ss_pred cC-----eEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEE-EccCCccCCCCcceEEEEEechhhhccceeceEE
Q 008950 456 KG-----DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVM-SKRTGIRFWSKESLGHVEINLTDVVHNGRINEKY 529 (548)
Q Consensus 456 ~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~-d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~ 529 (548)
.+ ..++|++++++.||+|||+|.|.+.. ....|.|+|| |++. ++.|++||++.++|.++..+....+||
T Consensus 61 ~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~L~~~V~~d~d~---~~~d~~iG~~~i~l~~l~~~~~~~~W~ 135 (171)
T 2q3x_A 61 LENGACIAKKKTRIARKTLDPLYQQSLVFDESP--QGKVLQVIVWGDYGR---MDHKCFMGVAQILLEELDLSSMVIGWY 135 (171)
T ss_dssp EETTEEEEEEECCCCCSCSSCEEEEEEECSSCC--TTEEEEEEEEEECST---TCSSEEEEEEEECGGGSCTTSCEEEEE
T ss_pred ECCCccccceeCccCCCCCCCCCCcEEEEEecC--CCCEEEEEEEEcCCC---CCCCCEEEEEEEEHHHcccCCCcceeE
Confidence 64 26799999999999999999999864 3578999999 8874 678899999999999998777778999
Q ss_pred EeCCC
Q 008950 530 HLINS 534 (548)
Q Consensus 530 ~L~~~ 534 (548)
+|.+.
T Consensus 136 ~L~~~ 140 (171)
T 2q3x_A 136 KLFPP 140 (171)
T ss_dssp ECBCG
T ss_pred ECCCc
Confidence 99765
No 72
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.66 E-value=5.2e-16 Score=132.79 Aligned_cols=118 Identities=19% Similarity=0.322 Sum_probs=100.5
Q ss_pred eEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeec-CCCCCeeeceEEEEEecC--CCCEEEEEEEEcCCC
Q 008950 264 GILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEP--ESQILQLQVFDWDKV 340 (548)
Q Consensus 264 g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d~d~~ 340 (548)
-.|+|+|.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||+|||.|.+++..+ .+..|.|.|||++++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 46999999999998 578999999997654 6999998 699999999999999754 367999999999999
Q ss_pred CCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEEec
Q 008950 341 GGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPF 395 (548)
Q Consensus 341 ~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~ 395 (548)
++|++||++.++|+++...+....+..|... ++....++|.++++|.|.
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~------n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDD------NNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECT------TSCEEEEEEEEEEEEEET
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCC------CCCccccEEEEEEEecCC
Confidence 9999999999999999988766666666432 234456899999999995
No 73
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=6.1e-16 Score=166.03 Aligned_cols=122 Identities=26% Similarity=0.407 Sum_probs=103.4
Q ss_pred cCCceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCC
Q 008950 260 KKPVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (548)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (548)
....|.|.|+|++|++|+++|..|.+||||++++++.. ++|+++++|+||.|||+|.|.+..+....|.|+|||+|.
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ 459 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC
Confidence 34678999999999999999999999999999998654 699999999999999999999987777889999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCc----eEEEEeccccccCCCCCCCccccEEEEEEEEEe
Q 008950 340 VGGHDRLGMQLVPLKLLTPHET----KEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (548)
Q Consensus 340 ~~~dd~lG~~~i~l~~l~~~~~----~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 394 (548)
.++|++||++.+++.++..+.. ...|+++. +...|+|++++.+.-
T Consensus 460 ~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~----------~~~~G~i~l~~~l~l 508 (510)
T 3jzy_A 460 FSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH----------EVPTGEVWVRFDLQL 508 (510)
T ss_dssp SSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB----------SSSSCEEEEEEEEEE
T ss_pred CCCCCceEEEEEEHHHhccccCCCCceeeeecCC----------CCCCceEEEEEEEEE
Confidence 9999999999999999986533 45666652 346799998887653
No 74
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.60 E-value=9e-15 Score=125.13 Aligned_cols=113 Identities=16% Similarity=0.375 Sum_probs=100.2
Q ss_pred EEEEEEeeeecCCCCCCCCcEEEEEEcCeEEEeeecc-CCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCc
Q 008950 430 LLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKE 507 (548)
Q Consensus 430 ~L~V~v~~a~~L~~~~~~dpyv~v~l~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~ 507 (548)
.|+|+|.+|.+|++ .+|||+++.+.+.++||++++ .+.||+|||.|+|++..+.. .+.|.|.|+|.+. +.++.
T Consensus 22 sL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~---v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK---VFSNK 96 (144)
T ss_dssp EEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT---TSCCE
T ss_pred EEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc---ccCCC
Confidence 48999999999996 689999999999999999998 69999999999999987533 3589999999985 78999
Q ss_pred ceEEEEEechhhhccceeceEEEeCCCC----CeEEEEEEEEEe
Q 008950 508 SLGHVEINLTDVVHNGRINEKYHLINSK----RGVIHVDIRWKM 547 (548)
Q Consensus 508 ~lG~~~i~L~~l~~~~~~~~w~~L~~~~----~G~i~l~~~~~~ 547 (548)
+||++.++|+++...+...-+-+|.+.. .+.|.+++.+.|
T Consensus 97 lIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp EEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 9999999999999988777777887764 589999999987
No 75
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=4.7e-15 Score=134.04 Aligned_cols=88 Identities=18% Similarity=0.290 Sum_probs=74.1
Q ss_pred CceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeec-CCCCCeeeceEEEEEecCCCCEEEEEEEEcCCC
Q 008950 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKK-KNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~-~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 340 (548)
+.+.|+|+|++|+++. ..|.+||||+++ . +. .+|++++ ++.||+|||+|.|.+.+. ...|.|+|||+| .
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 81 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 81 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-S
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-C
Confidence 4789999999999884 258899999999 2 22 3565554 699999999999999864 468999999999 8
Q ss_pred CCCCeeEEEEEECcccCCC
Q 008950 341 GGHDRLGMQLVPLKLLTPH 359 (548)
Q Consensus 341 ~~dd~lG~~~i~l~~l~~~ 359 (548)
++|++||++.++|+++...
T Consensus 82 ~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 82 IWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp SCCEEEEEEEEEGGGSCBC
T ss_pred CCCceEEEEEEEHHHhccc
Confidence 8999999999999998643
No 76
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.58 E-value=9.2e-15 Score=145.43 Aligned_cols=133 Identities=24% Similarity=0.359 Sum_probs=107.9
Q ss_pred CccccEEEEEEEEEecccCcccccccccccccCCCCCCCCCcccccCCceEEEEEEeeeecCCCC---CCCCcEEEEEE-
Q 008950 380 MKQRGKIVVELTYVPFKEDSIKFSSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGE---NHNNPYAIILY- 455 (548)
Q Consensus 380 ~~~~G~l~l~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~---~~~dpyv~v~l- 455 (548)
.+..|+|++++.|.+. .+.|.|+|++|++|+.. +.+||||++++
T Consensus 3 ~~~~G~l~~~l~y~~~--------------------------------~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~ 50 (296)
T 1dqv_A 3 GAPCGRISFALRYLYG--------------------------------SDQLVVRILQALDLPAKDSNGFSDPYVKIYLL 50 (296)
T ss_dssp CCSSCEEEEEEECCSS--------------------------------SCEEEEEEEEEECCCCCSTTSCCCEEEEEECT
T ss_pred CCeeeEEEEEEEEeCC--------------------------------CCEEEEEEEEeECCCCcCCCCCcCeEEEEEEE
Confidence 4578999999998753 57899999999999863 57999999999
Q ss_pred --cCeEEEeeeccCCCCCccCceEEEEccCCCC-CCeEEEEEEEccCCccCCCCcceEEEEEe-chhhhc-cceeceEEE
Q 008950 456 --KGDKKRTKMIRKTRDPAWNEEFQFMLDEPPL-HEKIHIEVMSKRTGIRFWSKESLGHVEIN-LTDVVH-NGRINEKYH 530 (548)
Q Consensus 456 --~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~v~V~d~~~~~~~~~d~~lG~~~i~-L~~l~~-~~~~~~w~~ 530 (548)
+.+.++|++++++.||+|||+|.|.+..... ...|.|+|||++. ++.|++||++.++ +.++.. ......|++
T Consensus 51 ~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~---~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~ 127 (296)
T 1dqv_A 51 PDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR---FSRHDLIGQVVLDNLLELAEQPPDRPLWRD 127 (296)
T ss_dssp TSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS---SSCCCEEEEEECCCTTGGGSSCSSCCCCEE
T ss_pred cCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC---CCCCceEEEEEeccccccccCCccceeeec
Confidence 4567899999999999999999999864321 3489999999985 6789999999996 555544 234467999
Q ss_pred eCCC-----CCeEEEEEEEEEe
Q 008950 531 LINS-----KRGVIHVDIRWKM 547 (548)
Q Consensus 531 L~~~-----~~G~i~l~~~~~~ 547 (548)
|... ..|+|.+++.+.|
T Consensus 128 L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 128 ILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp CBCCSSCCSCCCEEEEEEEEET
T ss_pred cccccccccccceEEEEEEecc
Confidence 9653 3699999988764
No 77
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.57 E-value=4.1e-15 Score=162.67 Aligned_cols=108 Identities=28% Similarity=0.453 Sum_probs=97.9
Q ss_pred CCceEEEEEEEEecCccc---cCCCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecCCCCEEEEEEEEc
Q 008950 261 KPVGILHVKVVRASKLLK---KDFLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEPESQILQLQVFDW 337 (548)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~ 337 (548)
.+.|.|+|+|++|++|+. +|..|.+||||++++++....+++|+++++++||+|||+|.|.+..+..+.|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 567999999999999999 88889999999999997544567999999999999999999999876778999999999
Q ss_pred CCCCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 338 DKVGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 338 d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
|.++ |++||++.+++.++..+..+..|++|.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 9998 999999999999998887777888874
No 78
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.56 E-value=3.4e-14 Score=123.22 Aligned_cols=111 Identities=21% Similarity=0.277 Sum_probs=84.9
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcCeEEEeeecc-CCCCCccCceEEEEccCCCCCCeEEEEEEEccCCccCCC
Q 008950 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRFWS 505 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~ 505 (548)
..+.|.|+|++|++++..+.+||||++. ++..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ +..
T Consensus 3 ~~~~L~V~V~~A~~l~~~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d----~~~ 74 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG----LIW 74 (131)
T ss_dssp CCEEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCC--SSEEEEEEEECC----SSC
T ss_pred cceEEEEEEEEeECCCCCCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCC--CCeEEEEEEECC----CCC
Confidence 3589999999999997667899999999 3344565554 799999999999999864 457999999997 457
Q ss_pred CcceEEEEEechhhhccc--eeceEEEeCCC--------------CCeEEEEEEEE
Q 008950 506 KESLGHVEINLTDVVHNG--RINEKYHLINS--------------KRGVIHVDIRW 545 (548)
Q Consensus 506 d~~lG~~~i~L~~l~~~~--~~~~w~~L~~~--------------~~G~i~l~~~~ 545 (548)
|++||++.++|+++.... ...+|.++.-. ..+.+.+.++|
T Consensus 75 dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 75 DTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred CCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 999999999999987643 11245544311 14557777776
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.55 E-value=3.4e-14 Score=152.43 Aligned_cols=116 Identities=22% Similarity=0.427 Sum_probs=102.6
Q ss_pred CceEEEEEEeeeecCCC---CCCCCcEEEEEEcCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCCccC
Q 008950 427 GAGLLSVLVQGAEDVEG---ENHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRF 503 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~---~~~~dpyv~v~l~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~~ 503 (548)
..|.|.|+|.+|++|+. .+.+||||++++++..++|++++++.||+|||+|.|.+... ..+.|.|+|||++. +
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d~---~ 460 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL-YQDVLCLTLFDRDQ---F 460 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCT-TTCEEEEEEEECCS---S
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCC-CCCEEEEEEEeCCC---C
Confidence 56899999999999976 35799999999999999999999999999999999999775 44689999999985 6
Q ss_pred CCCcceEEEEEechhhhccce----eceEEEeCCCCCeEEEEEEEEE
Q 008950 504 WSKESLGHVEINLTDVVHNGR----INEKYHLINSKRGVIHVDIRWK 546 (548)
Q Consensus 504 ~~d~~lG~~~i~L~~l~~~~~----~~~w~~L~~~~~G~i~l~~~~~ 546 (548)
+.|++||++.++|.++..+.. ...|++|.+...|+|+++++.+
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 789999999999999987543 6789999998999999998765
No 80
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.52 E-value=5.4e-14 Score=127.03 Aligned_cols=88 Identities=22% Similarity=0.338 Sum_probs=74.6
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEEcCeEEEeeecc-CCCCCccCceEEEEccCCCCCCeEEEEEEEccCCccCCCC
Q 008950 428 AGLLSVLVQGAEDVEGENHNNPYAIILYKGDKKRTKMIR-KTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRFWSK 506 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~~~~d 506 (548)
.+.|.|+|++|++++..+.+||||++. .+..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ +..|
T Consensus 13 ~~~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d----~~~d 84 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG----LIWD 84 (167)
T ss_dssp CCEEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT--TSEEEEEEEECC----SSCC
T ss_pred eEEEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC--CCEEEEEEEECC----CCCC
Confidence 579999999999987667899999999 3445677665 699999999999999864 457999999997 4579
Q ss_pred cceEEEEEechhhhccc
Q 008950 507 ESLGHVEINLTDVVHNG 523 (548)
Q Consensus 507 ~~lG~~~i~L~~l~~~~ 523 (548)
++||++.++|+++....
T Consensus 85 d~iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 85 TMVGTVWIPLRTIRQSN 101 (167)
T ss_dssp EEEEEEEEEGGGSCBCS
T ss_pred ceEEEEEEEHHHhcccC
Confidence 99999999999987643
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.51 E-value=1.1e-13 Score=150.26 Aligned_cols=123 Identities=22% Similarity=0.378 Sum_probs=100.0
Q ss_pred CceEEEEEEEEecCccccCC--CCCCCcEEEEEEcCc--ccceeeeeeecCC-CCCeeeceEEEEEecCCCCEEEEEEEE
Q 008950 262 PVGILHVKVVRASKLLKKDF--LGTSDPYVKLSLTGE--KLPWKKTTVKKKN-LNPEWNENFKLVVKEPESQILQLQVFD 336 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~--~g~~dpyv~v~l~~~--~~~~~~T~v~~~t-~nP~Wne~f~f~v~~~~~~~L~v~v~d 336 (548)
..+.|+|+|++|++|+..+. .|.+||||++.+.+. ...++||++++++ .||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999999874 689999999999653 2235799999987 999999999999987666789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCC-ccccEEEEEEEEE
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDM-KQRGKIVVELTYV 393 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~-~~~G~l~l~l~~~ 393 (548)
+|..++|++||++.+++..+..+. .+++|... .+. -..|.|.+.+.|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~------~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSK------NGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECT------TSCEEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCC------CcCCCCceEEEEEEEEE
Confidence 999999999999999999998753 35665321 111 2457888888774
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.48 E-value=3.2e-13 Score=143.42 Aligned_cols=109 Identities=18% Similarity=0.314 Sum_probs=92.7
Q ss_pred CceEEEEEEeeeecCCC--CCCCCcEEEEEEcCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccCCccCC
Q 008950 427 GAGLLSVLVQGAEDVEG--ENHNNPYAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRFW 504 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~--~~~~dpyv~v~l~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~~~~~~ 504 (548)
..|.|.|+|++|++|+. .+.+||||++++++++++|+++++++||+|||.|.|.+...+..+.|.|+|||+|. ..
T Consensus 392 ~~~~L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~---~~ 468 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY---GW 468 (540)
T ss_dssp TEEEEEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS---SS
T ss_pred cccEEEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC---CC
Confidence 46899999999999986 35799999999999999999999999999999999986543345789999999985 56
Q ss_pred CCcceEEEEEechhhhccceeceEEEeCCCCCeEEEEEEEE
Q 008950 505 SKESLGHVEINLTDVVHNGRINEKYHLINSKRGVIHVDIRW 545 (548)
Q Consensus 505 ~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l~~~~ 545 (548)
.|++||++.++|. .+....|++|. .|.|+++++.
T Consensus 469 ~dD~LG~~~~~L~----~g~~~~~~~l~---~G~l~~~~~~ 502 (540)
T 3nsj_A 469 DDDLLGSCDRSPH----SGFHEVTCELN---HGRVKFSYHA 502 (540)
T ss_dssp CCEEEEEEEECCC----SEEEEEEEECS---SSEEEEEEEE
T ss_pred CCCEEEEEEEEee----CCcEEEEEEcC---CeEEEEEEEE
Confidence 7899999999997 24457899875 6888888764
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.41 E-value=2.1e-14 Score=151.96 Aligned_cols=127 Identities=20% Similarity=0.235 Sum_probs=21.7
Q ss_pred CceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccceeeeeeecCC---CCCeeeceEEEEEecCCCCEEEEEEEEc-
Q 008950 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLPWKKTTVKKKN---LNPEWNENFKLVVKEPESQILQLQVFDW- 337 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~v~~~t---~nP~Wne~f~f~v~~~~~~~L~v~v~d~- 337 (548)
..|.|+|+|++|++|+++| ||||++++++... +||+++++| +||+|||+|.|.+... ...|.++|||.
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~ 80 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDS 80 (483)
T ss_dssp EEECC----------------------------------------------------CCEECC-----------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecC
Confidence 4588999999999999886 9999999987543 589999999 9999999999987543 57899999994
Q ss_pred C---CCCCCCeeEEEEEECcccCCCCceEEEEeccccccCC-----------------CCCCCccccEEEEEEEEEecc
Q 008950 338 D---KVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNIS-----------------DPKDMKQRGKIVVELTYVPFK 396 (548)
Q Consensus 338 d---~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~-----------------~~~~~~~~G~l~l~l~~~p~~ 396 (548)
| ..++|++||++.++++++..+.....|++|....... ..++....|.|++++.|.+..
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQTMS 159 (483)
T ss_dssp --------------------------CCEECC--------------------------------------CEEEEEECC
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeeeee
Confidence 4 3678999999999999999887777888874321100 001123569999999998754
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.36 E-value=1.7e-12 Score=142.10 Aligned_cols=108 Identities=20% Similarity=0.383 Sum_probs=93.5
Q ss_pred CceEEEEEEeeeecCCC------CCCCCcEEEEEEcC---eEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEc
Q 008950 427 GAGLLSVLVQGAEDVEG------ENHNNPYAIILYKG---DKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK 497 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~------~~~~dpyv~v~l~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~ 497 (548)
..+.|+|+|++|++|+. .+.+||||++++++ .+++|++++++.||+|||+|.|.+... ..+.|.|+|||+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D~ 94 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDA 94 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEEC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEEC
Confidence 47999999999999987 36899999999984 578999999999999999999999875 456899999999
Q ss_pred cCCccCCCCcceEEEEEechhhhccceeceEEEeCCCCCeEEEE
Q 008950 498 RTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSKRGVIHV 541 (548)
Q Consensus 498 ~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~~G~i~l 541 (548)
+. ++ |++||++.++|.++..+....+||+|... +++.+
T Consensus 95 D~---~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 95 NY---VM-DETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CS---SS-CEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CC---CC-CceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 85 56 99999999999999877777899999754 44443
No 85
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.35 E-value=6.4e-14 Score=148.30 Aligned_cols=117 Identities=11% Similarity=0.164 Sum_probs=21.0
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcCe-EEEeeeccCC---CCCccCceEEEEccCCCCCCeEEEEEEEc-cCCc
Q 008950 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKGD-KKRTKMIRKT---RDPAWNEEFQFMLDEPPLHEKIHIEVMSK-RTGI 501 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~~-~~kT~v~~~t---~nP~wne~f~f~v~~~~~~~~l~v~V~d~-~~~~ 501 (548)
..+.|+|+|++|++|+.++ ||||+++++++ ..||+++++| .||+|||+|+|.+... ...|.++|||+ +...
T Consensus 9 ~~~~L~V~VieAk~L~~~d--dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK--RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDKKR 84 (483)
T ss_dssp EEECC-----------------------------------------------CCEECC----------------------
T ss_pred eccEEEEEEEEcCCcCCCC--CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCccc
Confidence 4688999999999999864 99999999886 4599999999 9999999999987543 36899999995 3100
Q ss_pred cCCCCcceEEEEEechhhhccceeceEEEeCCC---------------------------CCeEEEEEEEEEe
Q 008950 502 RFWSKESLGHVEINLTDVVHNGRINEKYHLINS---------------------------KRGVIHVDIRWKM 547 (548)
Q Consensus 502 ~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~---------------------------~~G~i~l~~~~~~ 547 (548)
..++|++||++.|+++++..+...++||+|.+. ..|.|+|+++|++
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp ----------------------CCEECC--------------------------------------CEEEEEE
T ss_pred cCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 156789999999999999877777899999532 1589999999986
No 86
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.33 E-value=8.1e-12 Score=135.62 Aligned_cols=113 Identities=18% Similarity=0.307 Sum_probs=94.8
Q ss_pred CceEEEEEEeeeecCCCC-----CCCCcEEEEEEcC-----eEEEeeeccCC-CCCccCceEEEEccCCCCCCeEEEEEE
Q 008950 427 GAGLLSVLVQGAEDVEGE-----NHNNPYAIILYKG-----DKKRTKMIRKT-RDPAWNEEFQFMLDEPPLHEKIHIEVM 495 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~-----~~~dpyv~v~l~~-----~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~l~v~V~ 495 (548)
..+.|.|+|++|++|+.. +.+||||++.+.+ .++||++++++ .||+|||+|+|.+..+ ....|.|+||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~-el~~L~~~V~ 573 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVP-DLALVRFMVE 573 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCG-GGCEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecC-CCCEEEEEEE
Confidence 578999999999999863 4799999999955 56799999997 9999999999999875 3358999999
Q ss_pred EccCCccCCCCcceEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 008950 496 SKRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSK-----RGVIHVDIRWK 546 (548)
Q Consensus 496 d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 546 (548)
|++. ++.|++||++.++|.++..+. +|++|.+.. .+.|.+.++++
T Consensus 574 D~D~---~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDS---SSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCS---SSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EcCC---CCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 9985 678999999999999986543 689997653 46788887764
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=1.1e-11 Score=137.06 Aligned_cols=106 Identities=35% Similarity=0.518 Sum_probs=90.8
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc--ccceeeeeeecCCCCCeeeceEEEEEecCC-CCEEEEEEEEcCC
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE--KLPWKKTTVKKKNLNPEWNENFKLVVKEPE-SQILQLQVFDWDK 339 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~v~~~t~nP~Wne~f~f~v~~~~-~~~L~v~v~d~d~ 339 (548)
.+.|.|+|.+|++|.++|..|.+||||++++.+. ...+++|+++++++||.|||+|.|.+.... ...|.++|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 5889999999999999999999999999999543 234578999999999999999999987433 4579999999999
Q ss_pred CCCCCeeEEEEEECcccCCCCceEEEEecc
Q 008950 340 VGGHDRLGMQLVPLKLLTPHETKEFTLDLL 369 (548)
Q Consensus 340 ~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~ 369 (548)
.++|++||++.++++++.... ...|+.+.
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-~~~w~~Ll 279 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-VDGWFKLL 279 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-EEEEEECB
T ss_pred ccccccccccccchhhhccCC-cccceeec
Confidence 999999999999999998654 35666664
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.17 E-value=9e-11 Score=129.75 Aligned_cols=104 Identities=21% Similarity=0.470 Sum_probs=89.6
Q ss_pred ceEEEEEEeeeecCCC---CCCCCcEEEEEE-----cCeEEEeeeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccC
Q 008950 428 AGLLSVLVQGAEDVEG---ENHNNPYAIILY-----KGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRT 499 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~---~~~~dpyv~v~l-----~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~ 499 (548)
.+.|.|++.+|++|.. .+.+||||++++ ...+++|++++++.||.|||.|.|.+........|.++|||++.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4689999999999976 368999999999 34567999999999999999999999876455679999999985
Q ss_pred CccCCCCcceEEEEEechhhhccceeceEEEeCCCC
Q 008950 500 GIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSK 535 (548)
Q Consensus 500 ~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~ 535 (548)
.+.|++||.+.++++++...+. .+||.|.+..
T Consensus 251 ---~~~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~~ 282 (674)
T 3pfq_A 251 ---TSRNDFMGSLSFGISELQKAGV-DGWFKLLSQE 282 (674)
T ss_dssp ---SSCCEECCBCCCBTTHHHHCCE-EEEEECBCTT
T ss_pred ---ccccccccccccchhhhccCCc-ccceeecccc
Confidence 6889999999999999987654 8999997654
No 89
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.14 E-value=1.7e-10 Score=128.29 Aligned_cols=119 Identities=18% Similarity=0.270 Sum_probs=90.7
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcc---cceeeeeeecC-CCCCeeec-eEEEE-EecCCCCEEEEEEEE
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEK---LPWKKTTVKKK-NLNPEWNE-NFKLV-VKEPESQILQLQVFD 336 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~---~~~~~T~v~~~-t~nP~Wne-~f~f~-v~~~~~~~L~v~v~d 336 (548)
...|.|+|++|++|+.. .+||||+|.+.+.. ..+++|+++++ +.||+||| +|.|. +..+....|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34799999999999853 68999999997521 12368998875 69999999 69998 766666789999999
Q ss_pred cCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEEeccc
Q 008950 337 WDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFKE 397 (548)
Q Consensus 337 ~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~~ 397 (548)
+| |++||++.+||..|..|- ..++|... ....-..|.|.+.+.+.....
T Consensus 800 ~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~-----~g~~l~~atLfv~i~~~~~~~ 848 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGY---HYVCLRNE-----ANQPLCLPALLIYTEASDYIP 848 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEE---EEEEEECT-----TSCEEEEEEEEEEEEEEECCC
T ss_pred CC----ccEEeeEEEEHHHcCCCc---eEEEecCC-----CCCccCceEEEEEEEEEecCC
Confidence 87 789999999999998763 23455321 011225689999998886543
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.12 E-value=2.7e-10 Score=126.62 Aligned_cols=115 Identities=22% Similarity=0.332 Sum_probs=87.0
Q ss_pred CceEEEEEEEEecCccccCCCCCCCcEEEEEEcCc---ccceeeee-eec-CCCCCeeec-eEEE-EEecCCCCEEEEEE
Q 008950 262 PVGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGE---KLPWKKTT-VKK-KNLNPEWNE-NFKL-VVKEPESQILQLQV 334 (548)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~---~~~~~~T~-v~~-~t~nP~Wne-~f~f-~v~~~~~~~L~v~v 334 (548)
..|.|.|+|++|++|+. +.+||||++.+.+. ...+++|+ +++ ++.||+||| +|.| .+..+....|+|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46799999999999985 46899999999542 22346898 775 579999999 7999 78766667899999
Q ss_pred EEcCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCC-ccccEEEEEEEEE
Q 008950 335 FDWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDM-KQRGKIVVELTYV 393 (548)
Q Consensus 335 ~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~-~~~G~l~l~l~~~ 393 (548)
||+| +++||++.++++.|..|. .+++|... .+. -..+.|.+.+.+.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~~------~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSGY---HHLCLHSE------SNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCEE---EEEEEECT------TCCEEEEEEEEEEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCCc---EEEeccCC------CCCCCCceEEEEEEEEE
Confidence 9986 789999999999998752 34555321 111 2347777777653
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.11 E-value=4.1e-10 Score=124.57 Aligned_cols=118 Identities=18% Similarity=0.309 Sum_probs=89.6
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEEcCccc----ceeeeeeecC-CCCCeeece-EEEE-EecCCCCEEEEEEE
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKL----PWKKTTVKKK-NLNPEWNEN-FKLV-VKEPESQILQLQVF 335 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~----~~~~T~v~~~-t~nP~Wne~-f~f~-v~~~~~~~L~v~v~ 335 (548)
.+.|.|+|++|++|+.+ .+||||++.+.+... .+++|+++++ +.||+|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 689999999976321 3468998875 699999998 9998 76666678999999
Q ss_pred EcCCCCCCCeeEEEEEECcccCCCCceEEEEeccccccCCCCCCCccccEEEEEEEEEecc
Q 008950 336 DWDKVGGHDRLGMQLVPLKLLTPHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVPFK 396 (548)
Q Consensus 336 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p~~ 396 (548)
|++ |++||++.++|+.|..|- ..++|... ....-..+.|.+.+.+....
T Consensus 725 D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~-----~g~~~~~atLfv~i~~~~~~ 773 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPGY---RHVPLRNE-----SNRPLGLASVFAHIVAKDYV 773 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCEE---EEEEEECT-----TSCEEEEEEEEEEEEEEECC
T ss_pred ecC----CCeeeEEEEEHHHcCCcc---eEEEEeCC-----CCCCCCceEEEEEEEEEecC
Confidence 985 789999999999998763 23555321 01122347888888777543
No 92
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.00 E-value=4.9e-09 Score=86.93 Aligned_cols=113 Identities=19% Similarity=0.318 Sum_probs=85.6
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEEcCcccc-eeee-eeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCCC
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSLTGEKLP-WKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDKV 340 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l~~~~~~-~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~~ 340 (548)
.+.|+|...++.--+-.......||||.+.+...... ..+| ..+++|..|+|||+|.-.+++ ...|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 3678888866653222222246899999999754321 2355 677889999999999999875 6789999997653
Q ss_pred CCCCeeEEEEEECcccC-----CCCceEEEEeccccccCCCCCCCccccEEEEEEEEE
Q 008950 341 GGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYV 393 (548)
Q Consensus 341 ~~dd~lG~~~i~l~~l~-----~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~ 393 (548)
+|++.|++++++|. .+...+.|++| ++.|+|++.+.|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdL------------eP~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDL------------QPQAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEEC------------BSSCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEe
Confidence 89999999999998 44566788887 4689999999887
No 93
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.97 E-value=3.5e-09 Score=117.16 Aligned_cols=108 Identities=22% Similarity=0.283 Sum_probs=86.7
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcC-------eEEEeeeccC-CCCCccCce-EEEE-ccCCCCCCeEEEEEEE
Q 008950 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG-------DKKRTKMIRK-TRDPAWNEE-FQFM-LDEPPLHEKIHIEVMS 496 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~-------~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~~~~~l~v~V~d 496 (548)
..+.|.|+|++|++|+.. .+||||+|.+.+ ++++|+++++ +.||+|||+ |+|. +..+ .-..|.++|+|
T Consensus 648 ~~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~p-ela~Lrf~V~D 725 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK-QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLP-DLAVVRIIVSE 725 (816)
T ss_dssp CCEEEEEEEEEEECCCSS-CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCG-GGCEEEEEEEE
T ss_pred cceEEEEEEEEcccCCCC-CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCC-CccEEEEEEEe
Confidence 357899999999999864 789999999975 4679999986 699999997 9998 7665 33589999999
Q ss_pred ccCCccCCCCcceEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 008950 497 KRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSK-----RGVIHVDIRWK 546 (548)
Q Consensus 497 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 546 (548)
++ +++||++.++|+.|..+. ++.+|.+.. .+.|.+.+..+
T Consensus 726 ~d-------ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 726 EN-------GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp TT-------SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cC-------CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEE
Confidence 74 489999999999987543 468887653 35666666554
No 94
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.93 E-value=4.2e-09 Score=117.14 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=86.1
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eEEEeeeccC-CCCCccCc-eEEEE-ccCCCCCCeEEEEEEEcc
Q 008950 428 AGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTKMIRK-TRDPAWNE-EFQFM-LDEPPLHEKIHIEVMSKR 498 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~------~~~kT~v~~~-t~nP~wne-~f~f~-v~~~~~~~~l~v~V~d~~ 498 (548)
...|.|+|++|++|+.. .+||||+|.+.+ .+++|+++++ +.||+||| +|+|. +..+ ....|.++|||++
T Consensus 724 ~~~L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~p-ela~Lrf~V~D~d 801 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLP-TLASLRIAAFEEG 801 (885)
T ss_dssp CEEEEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCG-GGCEEEEEEEETT
T ss_pred ceEEEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcC-CcCEEEEEEEcCC
Confidence 45799999999999874 689999999975 2469999986 59999999 69998 6654 3358999999975
Q ss_pred CCccCCCCcceEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 008950 499 TGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSK-----RGVIHVDIRWK 546 (548)
Q Consensus 499 ~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 546 (548)
+++||++.++|+.|..+. ++.+|.+.. .|.|.+.+..+
T Consensus 802 -------ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 802 -------GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEAS 844 (885)
T ss_dssp -------TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred -------ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEEE
Confidence 589999999999986543 467887653 46788877765
No 95
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.93 E-value=5.2e-09 Score=116.41 Aligned_cols=108 Identities=21% Similarity=0.298 Sum_probs=85.7
Q ss_pred CceEEEEEEeeeecCCCCCCCCcEEEEEEcC------eEEEee-eccC-CCCCccCc-eEEE-EccCCCCCCeEEEEEEE
Q 008950 427 GAGLLSVLVQGAEDVEGENHNNPYAIILYKG------DKKRTK-MIRK-TRDPAWNE-EFQF-MLDEPPLHEKIHIEVMS 496 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~~~~dpyv~v~l~~------~~~kT~-v~~~-t~nP~wne-~f~f-~v~~~~~~~~l~v~V~d 496 (548)
..+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ +.||+||| +|+| .+..+. -..|.++|+|
T Consensus 676 ~~~~L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e-l~~Lr~~V~D 753 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE-LASLRVAVME 753 (799)
T ss_dssp TCEEEEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG-GCEEEEEEEE
T ss_pred eeeeEEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC-ccEEEEEEEE
Confidence 46899999999999986 4789999999954 257999 8875 69999999 6999 786653 3489999999
Q ss_pred ccCCccCCCCcceEEEEEechhhhccceeceEEEeCCCC-----CeEEEEEEEEE
Q 008950 497 KRTGIRFWSKESLGHVEINLTDVVHNGRINEKYHLINSK-----RGVIHVDIRWK 546 (548)
Q Consensus 497 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~i~l~~~~~ 546 (548)
++ +++||++.++|+.+..+ .++++|.+.. .+.|.+.++.+
T Consensus 754 ~d-------~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 754 EG-------NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp TT-------TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred eC-------CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 85 58999999999998653 3578887653 35666766654
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.92 E-value=4.9e-08 Score=80.97 Aligned_cols=107 Identities=18% Similarity=0.313 Sum_probs=84.6
Q ss_pred ceEEEEEEeeeec--CCC-CCCCCcEEEEEEcCeE----EEe-eeccCCCCCccCceEEEEccCCCCCCeEEEEEEEccC
Q 008950 428 AGLLSVLVQGAED--VEG-ENHNNPYAIILYKGDK----KRT-KMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRT 499 (548)
Q Consensus 428 ~g~L~V~v~~a~~--L~~-~~~~dpyv~v~l~~~~----~kT-~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~~~ 499 (548)
...|++.+.++.. |+. ....||||.+.+.... .+| ...++|..|+||+.|.-.+.+. ..|.+.|+++..
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~a~ 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG---RVIQIVLMRAAE 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT---CEEEEEEEEETT
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC---EEEEEEEEcCCC
Confidence 5678888877653 332 2368999999986544 254 7777899999999999999874 689999997641
Q ss_pred CccCCCCcceEEEEEechhhhcc-----ceeceEEEeCCCCCeEEEEEEEEE
Q 008950 500 GIRFWSKESLGHVEINLTDVVHN-----GRINEKYHLINSKRGVIHVDIRWK 546 (548)
Q Consensus 500 ~~~~~~d~~lG~~~i~L~~l~~~-----~~~~~w~~L~~~~~G~i~l~~~~~ 546 (548)
++++.+++++++|+.+ +..+-|..|+ ++|+|++.++|-
T Consensus 82 -------~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 -------EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--PQAKVLMSVQYF 124 (126)
T ss_dssp -------EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--SSCEEEEEEEEE
T ss_pred -------CeeeEEEEEHHHHHhhhccCCCceEEEEecc--cCcEEEEEEEEe
Confidence 8999999999999853 4567899997 599999999984
No 97
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.91 E-value=6.5e-09 Score=87.33 Aligned_cols=114 Identities=18% Similarity=0.254 Sum_probs=87.3
Q ss_pred ceEEEEEEEEecCccccC-CCCCCCcEEEEEEcCccc-ceeee-eeecCCCCCeeeceEEEEEecCCCCEEEEEEEEcCC
Q 008950 263 VGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKL-PWKKT-TVKKKNLNPEWNENFKLVVKEPESQILQLQVFDWDK 339 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d-~~g~~dpyv~v~l~~~~~-~~~~T-~v~~~t~nP~Wne~f~f~v~~~~~~~L~v~v~d~d~ 339 (548)
.+.|+|.+.++.--+... .....||||.+.+..... ...+| ..+++|..|+|||+|.-.+++ .+.|.|.|++...
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKNV 86 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSSC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCCC
Confidence 467888887766433221 123589999999975432 23567 777789999999999988875 6789999996543
Q ss_pred CCCCCeeEEEEEECcccC-----CCCceEEEEeccccccCCCCCCCccccEEEEEEEEEe
Q 008950 340 VGGHDRLGMQLVPLKLLT-----PHETKEFTLDLLKHTNISDPKDMKQRGKIVVELTYVP 394 (548)
Q Consensus 340 ~~~dd~lG~~~i~l~~l~-----~~~~~~~~l~l~~~~~~~~~~~~~~~G~l~l~l~~~p 394 (548)
+|+..|++++.+|. .+...+.|++| ++.|+|++.+.|.-
T Consensus 87 ----~fVAn~tV~~edL~~~ck~~~g~~e~WvdL------------eP~Gkl~v~i~~~~ 130 (138)
T 2enj_A 87 ----DLISETTVELYSLAERCRKNNGKTEIWLEL------------KPQGRMLMNARYFL 130 (138)
T ss_dssp ----SCCEEEEEESHHHHHHHHHTTTCEEEEEEC------------BSSCEEEEEEEECC
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEec------------ccCcEEEEEEEEEE
Confidence 89999999999998 44566889887 46899999999973
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.85 E-value=5.1e-08 Score=81.89 Aligned_cols=108 Identities=17% Similarity=0.262 Sum_probs=85.5
Q ss_pred CceEEEEEEeeeecCCC----CCCCCcEEEEEEcCeE----EEe-eeccCCCCCccCceEEEEccCCCCCCeEEEEEEEc
Q 008950 427 GAGLLSVLVQGAEDVEG----ENHNNPYAIILYKGDK----KRT-KMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSK 497 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~----~~~~dpyv~v~l~~~~----~kT-~v~~~t~nP~wne~f~f~v~~~~~~~~l~v~V~d~ 497 (548)
..+.|+|.+.++.--+. ....||||.|.+.... .+| ...++|..|+||+.|.-.+.+. ..|.|.|+++
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~ 84 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG---RVMQIIVKGK 84 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS---CEEEEEEECS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC---eEEEEEEEcC
Confidence 35778888877764332 3469999999986542 366 6677899999999999998774 6899999965
Q ss_pred cCCccCCCCcceEEEEEechhhhcc-----ceeceEEEeCCCCCeEEEEEEEEE
Q 008950 498 RTGIRFWSKESLGHVEINLTDVVHN-----GRINEKYHLINSKRGVIHVDIRWK 546 (548)
Q Consensus 498 ~~~~~~~~d~~lG~~~i~L~~l~~~-----~~~~~w~~L~~~~~G~i~l~~~~~ 546 (548)
. .++++.+++++.+|+.+ +..+-|..|+ ++|+|++.++|.
T Consensus 85 a-------~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--P~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 N-------VDLISETTVELYSLAERCRKNNGKTEIWLELK--PQGRMLMNARYF 129 (138)
T ss_dssp S-------CSCCEEEEEESHHHHHHHHHTTTCEEEEEECB--SSCEEEEEEEEC
T ss_pred C-------CCeeeEEEEEHHHHHhhhccCCCceEEEEecc--cCcEEEEEEEEE
Confidence 3 18999999999999853 4557899998 599999999984
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.13 E-value=2.2 Score=39.07 Aligned_cols=56 Identities=14% Similarity=0.214 Sum_probs=40.8
Q ss_pred ceeeeeeecCCCCCeeeceEEEEEecC--CCCEEEEEEEEcCCCC----CCCeeEEEEEECc
Q 008950 299 PWKKTTVKKKNLNPEWNENFKLVVKEP--ESQILQLQVFDWDKVG----GHDRLGMQLVPLK 354 (548)
Q Consensus 299 ~~~~T~v~~~t~nP~Wne~f~f~v~~~--~~~~L~v~v~d~d~~~----~dd~lG~~~i~l~ 354 (548)
...+|.|...+.+|.|+|++.+.+... ....|.|+++...... .+..+|.+.+||-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 346888888999999999999988643 3567999998765321 2236777777764
No 100
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.86 E-value=0.84 Score=39.39 Aligned_cols=115 Identities=17% Similarity=0.319 Sum_probs=79.3
Q ss_pred CCceEEEEEEeeeecCCC-----CCCCCcEEEEEE--cC-eEEEeeeccCCCCCccCceEEEEccCCC------CCCeEE
Q 008950 426 SGAGLLSVLVQGAEDVEG-----ENHNNPYAIILY--KG-DKKRTKMIRKTRDPAWNEEFQFMLDEPP------LHEKIH 491 (548)
Q Consensus 426 ~~~g~L~V~v~~a~~L~~-----~~~~dpyv~v~l--~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~------~~~~l~ 491 (548)
...+++.++|.++. +.. .+..+|+.-+.+ .. +.+.|.++. ..+|.||-+-.|.+.... ....+.
T Consensus 15 ~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 15 RGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp SSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred CCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 35689999999886 221 134466544444 34 455666665 899999999999885421 022688
Q ss_pred EEEEEccCCccCCCCcceEEEEEechhhhccc-eeceEEEeCCC-----CCeEEEEEEEEE
Q 008950 492 IEVMSKRTGIRFWSKESLGHVEINLTDVVHNG-RINEKYHLINS-----KRGVIHVDIRWK 546 (548)
Q Consensus 492 v~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~-~~~~w~~L~~~-----~~G~i~l~~~~~ 546 (548)
+++..... ..-..||.++|+|.+++... ++....+|.+. .-|.++..++++
T Consensus 93 lELhqa~g----~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~ 149 (156)
T 2yrb_A 93 LEVHQAYS----TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLR 149 (156)
T ss_dssp EEEEEECS----SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEE
T ss_pred EEEEEeeC----CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEe
Confidence 99888653 24579999999999999754 45566677654 258999999887
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.18 E-value=2.9 Score=36.07 Aligned_cols=128 Identities=12% Similarity=0.103 Sum_probs=84.2
Q ss_pred cCCceEEEEEEEEecCccccC-CCCCCCcEEEEEEcCcccceeeeeeecCCCCCeeeceEEEEEecC-------CCCEEE
Q 008950 260 KKPVGILHVKVVRASKLLKKD-FLGTSDPYVKLSLTGEKLPWKKTTVKKKNLNPEWNENFKLVVKEP-------ESQILQ 331 (548)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~~d-~~g~~dpyv~v~l~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~~~-------~~~~L~ 331 (548)
....+.+.|+|.++.-=+..- ..+..+|+.-+.+.=-..+...|.+.. +.+|.+|-+-.|.|.-. .+..+.
T Consensus 14 ~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~ 92 (156)
T 2yrb_A 14 ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTIT 92 (156)
T ss_dssp CSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEE
T ss_pred cCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEE
Confidence 445689999999987322211 124457766666654334445676655 88999999888888421 245799
Q ss_pred EEEEEcCCCCCCCeeEEEEEECcccCCCCc-eEEEEeccccccCCCCCCC-ccccEEEEEEEEEec
Q 008950 332 LQVFDWDKVGGHDRLGMQLVPLKLLTPHET-KEFTLDLLKHTNISDPKDM-KQRGKIVVELTYVPF 395 (548)
Q Consensus 332 v~v~d~d~~~~dd~lG~~~i~l~~l~~~~~-~~~~l~l~~~~~~~~~~~~-~~~G~l~l~l~~~p~ 395 (548)
++++.... +.-+.+|.+.|++.++...+. .....++.. + .+. ..-|.|.+.++....
T Consensus 93 lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g---~---~g~~~~~G~LeywiRL~~P 151 (156)
T 2yrb_A 93 LEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIG---T---KGDIPNFGTVEYWFRLRVS 151 (156)
T ss_dssp EEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECB---S---SSCCTTSEEEEEEEEEEEC
T ss_pred EEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEc---C---CCCcceEEEEEEEEEEecc
Confidence 99998753 345689999999999986544 333444432 1 112 468999999987653
No 102
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=88.93 E-value=3.7 Score=46.65 Aligned_cols=93 Identities=23% Similarity=0.199 Sum_probs=61.6
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEE--cCcccce-eeeeeecCCCCCeeeceEEEEEe---cCCCCEEEEEEEE
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPW-KKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~~-~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~v~d 336 (548)
...++|+|.++.++.... ....+-||.+.+ |++.... .+|+. ....+|.|||...|.+. -|....|.|.||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999999886432 234677888776 4443322 23433 34567889999999875 2447789999998
Q ss_pred cCCC----CCCCeeEEEEEECcccC
Q 008950 337 WDKV----GGHDRLGMQLVPLKLLT 357 (548)
Q Consensus 337 ~d~~----~~dd~lG~~~i~l~~l~ 357 (548)
.... ..+..||.+.++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 7542 12347888888887654
No 103
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=88.49 E-value=2.2 Score=48.03 Aligned_cols=92 Identities=11% Similarity=0.105 Sum_probs=60.7
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEEEE--cCcccc-eeeeeeecCCCCCeeeceEEEEEe---cCCCCEEEEEEEE
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLP-WKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFD 336 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~v~d 336 (548)
...+.|+|.++.++... ..++-||.+.+ |+.... ...|+.+.-..+|.|||...|.+. -|....|.|.+|+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 45799999999998754 34677887665 544331 234555555778999999999875 2347789999999
Q ss_pred cCCC--C----------CCCeeEEEEEECcccC
Q 008950 337 WDKV--G----------GHDRLGMQLVPLKLLT 357 (548)
Q Consensus 337 ~d~~--~----------~dd~lG~~~i~l~~l~ 357 (548)
.... + .+..+|.+.+++-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 6431 1 1347788887776543
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=88.45 E-value=1.5 Score=49.28 Aligned_cols=93 Identities=9% Similarity=0.141 Sum_probs=63.7
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEE--cCeE----EEeeeccCCCCCccCceEEEE--ccCCCCCCeEEEEEEEccC
Q 008950 428 AGLLSVLVQGAEDVEGENHNNPYAIILY--KGDK----KRTKMIRKTRDPAWNEEFQFM--LDEPPLHEKIHIEVMSKRT 499 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dpyv~v~l--~~~~----~kT~v~~~t~nP~wne~f~f~--v~~~~~~~~l~v~V~d~~~ 499 (548)
...+.|+|.++.++......+-||++.+ |++. ..|+.+....+|.|||-++|. +.+.|.+..|.+.||+...
T Consensus 216 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 295 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVE 295 (940)
T ss_dssp CSEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC-
T ss_pred CCceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecC
Confidence 4679999999999987666778888765 4432 466666668889999966665 4566677899999998531
Q ss_pred C------c---cCCCCcceEEEEEechhhh
Q 008950 500 G------I---RFWSKESLGHVEINLTDVV 520 (548)
Q Consensus 500 ~------~---~~~~d~~lG~~~i~L~~l~ 520 (548)
. . .-..+..+|.++++|-+-.
T Consensus 296 ~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 296 KAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp ---------------CEEEEEEEEESBCTT
T ss_pred CccCccccccccccccceEEEEeeeEECCc
Confidence 0 0 0012459999999997753
No 105
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=83.26 E-value=7.4 Score=43.80 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=59.5
Q ss_pred eEEEEEEEEecCccccCCCCCCCcEEEEEE--cCcccceeeeeeecCCCCCeeeceEEEEEe---cCCCCEEEEEEEEcC
Q 008950 264 GILHVKVVRASKLLKKDFLGTSDPYVKLSL--TGEKLPWKKTTVKKKNLNPEWNENFKLVVK---EPESQILQLQVFDWD 338 (548)
Q Consensus 264 g~L~V~V~~A~~L~~~d~~g~~dpyv~v~l--~~~~~~~~~T~v~~~t~nP~Wne~f~f~v~---~~~~~~L~v~v~d~d 338 (548)
..++|+|.++......+ +..++-||.+.+ |+......+|+.+.-+.+|.|||...|.+. -|....|.+++|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 46788888886522111 234577877654 544433334555555678999999998875 234778999999854
Q ss_pred CCC----------------CCCeeEEEEEECcccCC
Q 008950 339 KVG----------------GHDRLGMQLVPLKLLTP 358 (548)
Q Consensus 339 ~~~----------------~dd~lG~~~i~l~~l~~ 358 (548)
..+ +...+|.+.++|-+...
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTS
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCC
Confidence 221 23478999888866543
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=77.93 E-value=4.9 Score=45.64 Aligned_cols=93 Identities=18% Similarity=0.230 Sum_probs=61.7
Q ss_pred CceEEEEEEeeeecCCCC--CCCCcEEEEEE--cCe----EEEeeeccCCCCCccCceEEEE--ccCCCCCCeEEEEEEE
Q 008950 427 GAGLLSVLVQGAEDVEGE--NHNNPYAIILY--KGD----KKRTKMIRKTRDPAWNEEFQFM--LDEPPLHEKIHIEVMS 496 (548)
Q Consensus 427 ~~g~L~V~v~~a~~L~~~--~~~dpyv~v~l--~~~----~~kT~v~~~t~nP~wne~f~f~--v~~~~~~~~l~v~V~d 496 (548)
....+.|+|.++.++... ...+-||++.+ |++ ..+|+.+. ..+|.|||-.+|. +.+.|.+..|.+.||+
T Consensus 353 ~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 346789999999888643 35678998877 332 23454443 5678899966555 5666777899999998
Q ss_pred ccCCccC-CCCcceEEEEEechhhh
Q 008950 497 KRTGIRF-WSKESLGHVEINLTDVV 520 (548)
Q Consensus 497 ~~~~~~~-~~d~~lG~~~i~L~~l~ 520 (548)
.....+. .....||.++++|-+-.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6531000 13468999999997753
No 107
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=75.94 E-value=7.3 Score=43.87 Aligned_cols=93 Identities=14% Similarity=0.131 Sum_probs=59.5
Q ss_pred ceEEEEEEeeeec--CCCCCCCCcEEEEEE--cCeE---EEeeeccCCCCCccCceEEE--EccCCCCCCeEEEEEEEcc
Q 008950 428 AGLLSVLVQGAED--VEGENHNNPYAIILY--KGDK---KRTKMIRKTRDPAWNEEFQF--MLDEPPLHEKIHIEVMSKR 498 (548)
Q Consensus 428 ~g~L~V~v~~a~~--L~~~~~~dpyv~v~l--~~~~---~kT~v~~~t~nP~wne~f~f--~v~~~~~~~~l~v~V~d~~ 498 (548)
...+++.|.++.. ++.+...+-||++.+ |++. .+|+.+.-+.+|.|||-++| .+.+.|.+..|.++||+..
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4568888888864 233334567887654 5543 24555555778999996666 4556677789999999753
Q ss_pred CCc-------------cCCCCcceEEEEEechhhh
Q 008950 499 TGI-------------RFWSKESLGHVEINLTDVV 520 (548)
Q Consensus 499 ~~~-------------~~~~d~~lG~~~i~L~~l~ 520 (548)
... .-.....+|.++++|-+-.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 210 0013458999999997753
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=74.82 E-value=2.1 Score=48.83 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=61.8
Q ss_pred ceEEEEEEeeeecCCCCCCCCcEEEEEE--cCeE----EEeeeccCCCCCccCceEEEE--ccCCCCCCeEEEEEEEccC
Q 008950 428 AGLLSVLVQGAEDVEGENHNNPYAIILY--KGDK----KRTKMIRKTRDPAWNEEFQFM--LDEPPLHEKIHIEVMSKRT 499 (548)
Q Consensus 428 ~g~L~V~v~~a~~L~~~~~~dpyv~v~l--~~~~----~kT~v~~~t~nP~wne~f~f~--v~~~~~~~~l~v~V~d~~~ 499 (548)
...+.|+|.++.++......+-||++.+ |++. ..|+.+....+|.|||-++|. +.+.|.+..|.++||+...
T Consensus 352 ~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~ 431 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLD 431 (1092)
T ss_dssp CSEEEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC--
T ss_pred CCCEEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEecC
Confidence 4689999999999987666778887544 5543 356666567889999976665 4566677799999998521
Q ss_pred C-ccC------------------CCCcceEEEEEechhh
Q 008950 500 G-IRF------------------WSKESLGHVEINLTDV 519 (548)
Q Consensus 500 ~-~~~------------------~~d~~lG~~~i~L~~l 519 (548)
. .+. .....+|.++++|-+-
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 432 KVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp ----------------------------CCEEEEESBCT
T ss_pred ccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 0 000 1234899999999764
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=71.40 E-value=4.7 Score=45.94 Aligned_cols=73 Identities=18% Similarity=0.193 Sum_probs=50.9
Q ss_pred ceEEEEEEEEecCccccCCCCCCCcEEEE--EEcCcccc-eeeeeeecCCCCCeeeceEEEEEe--c-CCCCEEEEEEEE
Q 008950 263 VGILHVKVVRASKLLKKDFLGTSDPYVKL--SLTGEKLP-WKKTTVKKKNLNPEWNENFKLVVK--E-PESQILQLQVFD 336 (548)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~~dpyv~v--~l~~~~~~-~~~T~v~~~t~nP~Wne~f~f~v~--~-~~~~~L~v~v~d 336 (548)
...++|+|.++.++... ..++-||.+ +-|+.... ..+|+.+.-+.+|.|||...|.+. + |....|.+.+|+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46799999999998754 346777764 44554431 234555555778999999998875 2 347789999998
Q ss_pred cC
Q 008950 337 WD 338 (548)
Q Consensus 337 ~d 338 (548)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 110
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=68.66 E-value=15 Score=33.41 Aligned_cols=61 Identities=8% Similarity=0.192 Sum_probs=43.4
Q ss_pred eEEEeeeccCCCCCccCceEEEEccCCCCC-CeEEEEEEEccCCc-cCCCCcceEEEEEechh
Q 008950 458 DKKRTKMIRKTRDPAWNEEFQFMLDEPPLH-EKIHIEVMSKRTGI-RFWSKESLGHVEINLTD 518 (548)
Q Consensus 458 ~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~l~v~V~d~~~~~-~~~~d~~lG~~~i~L~~ 518 (548)
...+|.|.+.+.+|.|+|++...++..... ..|.++++...... +...+..+|..-++|-+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346899999999999999999998765322 36888887654320 01234578999999853
No 111
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=47.40 E-value=2.5 Score=27.97 Aligned_cols=14 Identities=7% Similarity=0.218 Sum_probs=6.9
Q ss_pred HHHheeeeeeecCC
Q 008950 23 LVGFFLFIYSKPND 36 (548)
Q Consensus 23 ~~~~~~~~~~~~~~ 36 (548)
++++..|.|+++++
T Consensus 26 ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 26 VVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhH
Confidence 33444555666544
No 112
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=41.06 E-value=3.3 Score=27.33 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=7.6
Q ss_pred HHHheeeeeeecCCc
Q 008950 23 LVGFFLFIYSKPNDD 37 (548)
Q Consensus 23 ~~~~~~~~~~~~~~r 37 (548)
+++...|.|+|++++
T Consensus 25 ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 25 IVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhhhhhh
Confidence 334445556665443
No 113
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=40.03 E-value=2.1 Score=28.25 Aligned_cols=24 Identities=21% Similarity=0.326 Sum_probs=12.6
Q ss_pred ccccchhhHHHHHheeeeeeecCC
Q 008950 13 FGFIGLPLGLLVGFFLFIYSKPND 36 (548)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~~~~~~~ 36 (548)
.+.+|+++.+++++....|+||++
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhheehhh
Confidence 344564444445555555666543
No 114
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=24.37 E-value=7.2 Score=24.26 Aligned_cols=24 Identities=21% Similarity=0.101 Sum_probs=13.8
Q ss_pred cccccchhhHHHHHheeeeeeecC
Q 008950 12 GFGFIGLPLGLLVGFFLFIYSKPN 35 (548)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~~~~~~ 35 (548)
.-|.+|+++-+++++....|+|++
T Consensus 11 aagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 11 IATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhheEEeec
Confidence 344556454455666666677653
Done!