BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008954
(547 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QPT|A Chain A, Crystal Structure Of An Ehd Atpase Involved In Membrane
Remodelling
Length = 550
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/400 (52%), Positives = 280/400 (70%), Gaps = 4/400 (1%)
Query: 145 WFTSKSVKKTPPSAVTSIIDGLKRLYSEKLKPLEATYRFNDFVSPFLTNSDFDAKPMVML 204
W + P A+ ++ LK LY KL PLE YRF F SP L ++DFD KPMV++
Sbjct: 11 WLKKGGARGQRPEAIRTVTSSLKELYRTKLLPLEEHYRFGSFHSPALEDADFDGKPMVLV 70
Query: 205 LGQYSTGKTTFIKHLLRCNYPGAHIGPEPTTDRFVVVMSGPDERTIPGNTIAVHADLPFS 264
GQYSTGKT+FI++LL PG+ +GPEPTTD FV VM G E T+PGN + V + PF
Sbjct: 71 AGQYSTGKTSFIQYLLEQEVPGSRVGPEPTTDCFVAVMHGETEGTVPGNALVVDPEKPFR 130
Query: 265 GLTTFGGAFLSKFECSQMSHPLLDQVTFVDTPGVLSGEKQRTQRTYDFTGVISWFAAKCD 324
L FG FL++F C+Q+ + +L+ ++ +DTPG+LSG KQR R YDF V+ WFA + D
Sbjct: 131 KLNPFGNTFLNRFMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVD 190
Query: 325 LILLLFDPHKLDISDEFKRVIASLRGNDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKV 384
LI+LLFD HKL+ISDEF I +LRG++DKIRVVLNKAD V+TQQLMRVYGALMW+LGKV
Sbjct: 191 LIILLFDAHKLEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKV 250
Query: 385 LNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDLIDIPKKACDRQINEFVK 444
+ TPEV+RVYIGSF +P+ + P + LFE E+ DL D+ +P+ A R++N+ VK
Sbjct: 251 VGTPEVLRVYIGSFWSQPL----LVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVK 306
Query: 445 RARAAKIHAYIISHLKKEMPTMMGKAKAQQRLIDNLEDEFAKVQREFHLPGGDFPNVEHF 504
RAR ++HAYIIS+LKKEMPT+ GK +++LI L FAK+Q E H+ GDFP+ +
Sbjct: 307 RARLVRVHAYIISYLKKEMPTVFGKENKKKQLILKLPVIFAKIQLEHHISPGDFPDCQKM 366
Query: 505 REVLNSYNIDKFEKLKPKMIQVVDDMLAYEIPELLKNFRN 544
+E+L +++ KF LKPK+++ +DDMLA +I +L+ R
Sbjct: 367 QELLMAHDFTKFHSLKPKLLEALDDMLAQDIAKLMPLLRQ 406
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDL 70
+K+ K ++++A +DG +++G+ A ++ +KL L +IW L+D R G LD
Sbjct: 453 VTKDKSKYDEIFYNLAPADG--KLSGSKAKTWMVGTKLPNSVLGRIWKLSDVDRDGMLDD 510
Query: 71 AEFVTAMKLVSLAQAGREITSDI 93
EF A L+ G + +++
Sbjct: 511 EEFALASHLIEAKLEGHGLPTNL 533
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 18 IYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAM 77
+Y +++ ++ GR+ DA FL S L L +IW LAD+ +G L EF A+
Sbjct: 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVAL 71
Query: 78 KLVSLAQAGREI 89
+LV+ AQ G E+
Sbjct: 72 RLVACAQNGLEV 83
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMK 78
YR+ F+ D G +TG A L S L + +L IW L+D + G L EF+ AM
Sbjct: 16 YRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMH 75
Query: 79 LVSLAQAGREI 89
L+ +A +G+ +
Sbjct: 76 LIDVAMSGQPL 86
>pdb|2KHN|A Chain A, Nmr Solution Structure Of The Eh 1 Domain From Human
Intersectin-1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%)
Query: 32 GRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLVSLAQAGREITS 91
G ITG+ A F S L + L QIWALAD G +D EF AMKL+ L G ++ S
Sbjct: 47 GFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLIKLKLQGYQLPS 106
Query: 92 DI 93
+
Sbjct: 107 AL 108
>pdb|2KFF|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 With
Fnyestnpftak
pdb|2KFG|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 In Complex
With Fnyestdpftak
pdb|2KFH|A Chain A, Structure Of The C-Terminal Domain Of Ehd1 With
Fnyestgpftak
pdb|2KSP|A Chain A, Mechanism For The Selective Interaction Of C-Terminal
Eh-Dom Proteins With Specific Npf-Containing Partners
Length = 105
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 31 DGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLVSLAQAGREIT 90
+G+ITG +A K + SKL L +IW LAD + G LD EF A L+ + G E+
Sbjct: 30 NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELP 89
Query: 91 SDI 93
+D+
Sbjct: 90 ADL 92
>pdb|2JQ6|A Chain A, Structure Of Eh-Domain Of Ehd1
Length = 139
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 31 DGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLVSLAQAGREIT 90
+G+ITG +A K + SKL L +IW LAD + G LD EF A L+ + G E+
Sbjct: 64 NGKITGANAKKEMVKSKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELP 123
Query: 91 SDI 93
+D+
Sbjct: 124 ADL 126
>pdb|1FI6|A Chain A, Solution Structure Of The Reps1 Eh Domain
Length = 92
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLA 71
+ E ++ Y F D +G I G+ A +F SKL EL IW L+D + G L L
Sbjct: 4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLD 63
Query: 72 EFVTAMKLVSLAQAGREITSDILKS 96
EF A LV + G ++ + +S
Sbjct: 64 EFCAAFHLVVARKNGYDLPEKLPES 88
>pdb|3FIA|A Chain A, Crystal Structure Of The Eh 1 Domain From Human
Intersectin- 1 Protein. Northeast Structural Genomics
Consortium Target Hr3646e
Length = 121
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 32/62 (51%)
Query: 32 GRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLVSLAQAGREITS 91
G ITG+ A F S L + L QIWALAD G D EF A KL+ L G ++ S
Sbjct: 47 GFITGDQARNFFFQSGLPQPVLAQIWALADXNNDGRXDQVEFSIAXKLIKLKLQGYQLPS 106
Query: 92 DI 93
+
Sbjct: 107 AL 108
>pdb|1IQ3|A Chain A, Solution Structure Of The Eps15 Homology Domain Of A
Human Pob1
Length = 110
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLA 71
++E ++ Y F D I+G+ A F SKLS EL IW L+D+ G L L
Sbjct: 17 TEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLP 76
Query: 72 EFVTAMKLVSLAQAG 86
EF A L+ + G
Sbjct: 77 EFCAAFHLIVARKNG 91
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 20 REWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAM 77
R F++ D+D G+IT + GL+ +S + + AD + +D EFV+ M
Sbjct: 438 RRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMM 495
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 8 ITFCSKEHQKIYRE----WFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSK 63
+T C + + RE F DSDG G+IT + + G++++ + Q+ D
Sbjct: 384 VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKN 443
Query: 64 RQGFLDLAEFVTAMKLVS 81
G +D EFV M+ +
Sbjct: 444 NDGEVDFEEFVEMMQKIC 461
>pdb|1C07|A Chain A, Structure Of The Third Eps15 Homology Domain Of Human
Eps15
Length = 95
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMK 78
Y E F D D DG ++G + + + L L IW+L D+K G L +F A
Sbjct: 12 YDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH 71
Query: 79 LVS 81
L+S
Sbjct: 72 LIS 74
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 8 ITFCSKEHQKIYRE----WFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSK 63
+T C + + RE F DSDG G+IT + + G++++ + Q+ D
Sbjct: 110 VTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKN 169
Query: 64 RQGFLDLAEFVTAMKLV 80
G +D EFV M+ +
Sbjct: 170 NDGEVDFEEFVEMMQKI 186
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGF 67
++E ++ RE FD+ D+DG G I + A + LG ++E+K++ + D G
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGT 80
Query: 68 LDLAEFVTAMKLVSLAQAG-REITSDILKS 96
+D EF+T M A+ G R+ +ILK+
Sbjct: 81 IDFEEFLTMM----TAKMGERDSREEILKA 106
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 23 FDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKL 79
F + D D G IT D K LG L+ +EL+++ A AD +D EF+ MK
Sbjct: 107 FRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165
Query: 80 VSL 82
SL
Sbjct: 166 TSL 168
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGFL 68
++E ++ RE FD+ D+DG G I + A + LG ++E+K++ + D G +
Sbjct: 25 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMISEIDKDGSGTI 83
Query: 69 DLAEFVTAM 77
D EF+T M
Sbjct: 84 DFEEFLTMM 92
>pdb|1FF1|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfl
Length = 95
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 14 EHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEF 73
E + Y FD + S +G ++G+ L SKL L ++W L+D G LD EF
Sbjct: 7 EDKAKYDAIFD-SLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEF 65
Query: 74 VTAMKLVSLA 83
AM LV A
Sbjct: 66 AVAMFLVYCA 75
>pdb|1F8H|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15 In Complex With Ptgssstnpfr
Length = 95
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 14 EHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEF 73
E + Y FD + S +G ++G+ L SKL L ++W L+D G LD EF
Sbjct: 7 EDKAKYDAIFD-SLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEF 65
Query: 74 VTAMKLVSLA 83
AM LV A
Sbjct: 66 AVAMFLVYCA 75
>pdb|2JXC|A Chain A, Structure Of The Eps15-Eh2 Stonin2 Complex
Length = 100
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 14 EHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEF 73
E + Y FD + S +G ++G+ L SKL L ++W L+D G LD EF
Sbjct: 12 EDKAKYDAIFD-SLSPVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEF 70
Query: 74 VTAMKLVSLA 83
AM LV A
Sbjct: 71 AVAMFLVYCA 80
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGF 67
++E ++ RE FD+ D+DG G I + A + LG ++E+K++ A D G
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEP-KKEEIKKMIADIDKDGSGT 60
Query: 68 LDLAEFVTAMKLVSLAQAGREITSDILKSGGLMENTEP 105
+D EF +++++ R+ +I+K+ L ++ E
Sbjct: 61 IDFEEF---LQMMTAKMGERDSREEIMKAFRLFDDDET 95
>pdb|1EH2|A Chain A, Structure Of The Second Eps15 Homology Domain Of Human
Eps15, Nmr, 20 Structures
Length = 106
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 31 DGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLVSLA 83
+G ++G+ L SKL L ++W L+D G LD EF AM LV A
Sbjct: 28 NGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCA 80
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 6 SPITFCSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADS 62
SP ++E ++ RE FD+ D+DG G I + A + LG ++E+K++ + D
Sbjct: 20 SPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-KKEEIKKMISEIDK 78
Query: 63 KRQGFLDLAEFVTAM 77
+ G ++ +F+T M
Sbjct: 79 EGTGKMNFGDFLTVM 93
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGF 67
++E ++E F + D DGDG IT + + LGL+ + EL+ + D+ G
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNP-TEAELQDMINEVDADGNGT 62
Query: 68 LDLAEFVTAM 77
+D EF+T M
Sbjct: 63 IDFPEFLTMM 72
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFL-GLSKLSRQELKQIWALADSKRQGFLDL 70
+ + ++I++ + D++GDG+I+ ++ T L L S E++++ A D+ GF+D
Sbjct: 2 ADDMERIFKRF----DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 57
Query: 71 AEFVT 75
EF++
Sbjct: 58 NEFIS 62
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFL-GLSKLSRQELKQIWALADSKRQGFLDL 70
+ + ++I++ + D++GDG+I+ ++ T L L S E++++ A D+ GF+D
Sbjct: 1 ADDMERIFKRF----DTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDF 56
Query: 71 AEFVT 75
EF++
Sbjct: 57 NEFIS 61
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 23 FDIADSDGDGRITGNDATKFL---GLSKLSRQELKQIWALADSKRQGFLDLAEFV 74
+ + D DGDG++T + T F G+ K++ Q +K AD+ G++ L EF+
Sbjct: 11 YKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK-----ADANGDGYITLEEFL 60
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGFL 68
++E ++ RE FD+ D+DG G I + A + LG ++E+K++ + D + G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEP-KKEEIKKMISEIDKEGTGKM 59
Query: 69 DLAEFVTAMKLVSLAQAGREITSDILKSGGLMENTEPPSM 108
+ +F+T M + + ++ +ILK+ L ++ E +
Sbjct: 60 NFGDFLTVM---TQKMSEKDTKEEILKAFKLFDDDETGKI 96
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 20 REWFDIADSDGDGRITGN---DATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTA 76
+E F + D+D G IT + D K +G S+L E+K + AD + G +D EF+ A
Sbjct: 26 KELFKMIDTDNSGTITFDELKDGLKRVG-SELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 23 FDIADSDGDGRITGNDATKFL---GLSKLSRQELKQIWALADSKRQGFLDLAEFV 74
+ + D DGDG++T + T F G+ K++ Q +K AD+ G++ L EF+
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK-----ADANGDGYITLEEFL 130
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 2 ATEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 57
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 58 NGTIDFPEFLTMM 70
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 23 FDIADSDGDGRITGNDATKFL---GLSKLSRQELKQIWALADSKRQGFLDLAEFV 74
+ + D DGDG++T + T F G+ K++ Q +K AD+ G++ L EF+
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMK-----ADANGDGYITLEEFL 130
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 62 GTIDFPEFLTMM 73
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 44 GLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLV 80
GL++ + + + Q++ D+ + GF+D EF+ A+ L+
Sbjct: 50 GLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLI 86
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 56
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 57 GTIDFPEFLTMM 68
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGN---DATKFLGLSKLSRQELKQIWALADSKRQGFL 68
S+E +E F + D+D G IT + D K +G S+L E+K + AD + G +
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVG-SELMESEIKDLMDAADIDKSGTI 63
Query: 69 DLAEFVTA 76
D EF+ A
Sbjct: 64 DYGEFIAA 71
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 279 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 73 FVTAM 77
F+T M
Sbjct: 335 FLTMM 339
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 279 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 334
Query: 73 FVTAM 77
F+T M
Sbjct: 335 FLTMM 339
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 57
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 58 NGTIDFPEFLTMM 70
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 56
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 57 NGTIDFPEFLTMM 69
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 13 KEHQKIYREWFDIADSDGDGRITGNDATKF---LGLSKLSRQELKQIWALADSKRQGFLD 69
K+ ++ RE F + D DG+G I+ + LG KL+ +E+ ++ AD G ++
Sbjct: 77 KDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADIDGDGQVN 135
Query: 70 LAEFVTAM 77
EFVT M
Sbjct: 136 YEEFVTMM 143
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 58
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 59 NGTIDFPEFLTMM 71
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 64 NGTIDFPEFLTMM 76
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 57
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 58 NGTIDFPEFLTMM 70
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 62 NGTIDFPEFLTMM 74
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 314 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 369
Query: 73 FVTAM 77
F+T M
Sbjct: 370 FLTMM 374
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 313 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 73 FVTAM 77
F+T M
Sbjct: 369 FLTMM 373
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 276 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 331
Query: 73 FVTAM 77
F+T M
Sbjct: 332 FLTMM 336
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 56
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 57 GTIDFPEFLTMM 68
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 313 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 73 FVTAM 77
F+T M
Sbjct: 369 FLTMM 373
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 313 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 73 FVTAM 77
F+T M
Sbjct: 369 FLTMM 373
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 65
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 66 NGTIDFPEFLTMM 78
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 NGTIDFPEFLTMM 72
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 312 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 73 FVTAM 77
F+T M
Sbjct: 368 FLTMM 372
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQ 65
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 66 GFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 GTIDFPEFLTMM 72
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 312 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 73 FVTAM 77
F+T M
Sbjct: 368 FLTMM 372
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 61 NGTIDFPEFLTMM 73
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 313 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 368
Query: 73 FVTAM 77
F+T M
Sbjct: 369 FLTMM 373
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1
With Calcium Bound
Length = 198
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 32 GRITGNDATKFLGLSKLS---RQELKQIWALADSKRQGFLDLAEFVTAMKLV 80
G++T + +F GL LS + ++Q++ D + G++D E+V A+ LV
Sbjct: 30 GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLV 81
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 312 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 367
Query: 73 FVTAM 77
F+T M
Sbjct: 368 FLTMM 372
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF+T M
Sbjct: 60 DGTIDFPEFLTMM 72
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 23 FDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMK 78
F D DG+G+I+ ++ GL L + K++ + DS G +D EF ++
Sbjct: 432 FQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 487
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 10 FCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELK------------QIW 57
S+E K + F D +GDG++ + G SKLS +E+ I
Sbjct: 339 LTSQEETKELTDIFRHIDKNGDGQLDRQELID--GYSKLSGEEVAVFDLPQIESEVDAIL 396
Query: 58 ALADSKRQGFLDLAEFVT-AMKLVSL 82
AD R G++D +EFVT AM SL
Sbjct: 397 GAADFDRNGYIDYSEFVTVAMDRKSL 422
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 313 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 368
Query: 73 FVTAM 77
F+T M
Sbjct: 369 FLTMM 373
>pdb|3R2D|A Chain A, Crystal Structure Of Antitermination Factors Nusb And Nuse
In Complex With Dsrna
pdb|3R2D|B Chain B, Crystal Structure Of Antitermination Factors Nusb And Nuse
In Complex With Dsrna
Length = 149
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 415 LFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTM 466
L KE + +D++D+ KK D + +FV +A AYI S K+E P++
Sbjct: 96 LKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYITSS-KEEKPSL 146
>pdb|2JR0|A Chain A, Solution Structure Of Nusb From Aquifex Aeolicus
pdb|3R2C|A Chain A, Crystal Structure Of Antitermination Factors Nusb And Nuse
In Complex With Boxa Rna
pdb|3R2C|B Chain B, Crystal Structure Of Antitermination Factors Nusb And Nuse
In Complex With Boxa Rna
pdb|4EYA|A Chain A, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|B Chain B, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|C Chain C, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|D Chain D, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|E Chain E, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|F Chain F, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|G Chain G, Crystal Structure Of A Plectonemic Rna Supercoil
pdb|4EYA|H Chain H, Crystal Structure Of A Plectonemic Rna Supercoil
Length = 148
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 415 LFEKEQDDLLMDLIDIPKKACDRQINEFVKRARAAKIHAYIISHLKKEMPTM 466
L KE + +D++D+ KK D + +FV +A AYI S K+E P++
Sbjct: 95 LKSKEPGRVFIDIVDLVKKYADEKAGKFVNGVLSAIYKAYITSS-KEEKPSL 145
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 2 EIAPSPITFCSKEHQKIYREW----FDIADSDGDGRITGNDATKFLGLSKL--SRQELKQ 55
E+A + S+ + + R W FDI D DG G I+ ++ + G+S + S ++ ++
Sbjct: 97 ELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEK 156
Query: 56 IWALADSKRQGFLDLAE 72
+ D G LD+ E
Sbjct: 157 TFKHCDLDNSGKLDVDE 173
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQ 65
F S+E ++ FD+ D+DG G I+ + + LG + +++EL I D
Sbjct: 1 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGS 59
Query: 66 GFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 60 GTIDFEEFLVMM 71
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 10 FCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQEL------------KQIW 57
S+E K + F D +GDG++ + G SKLS +E+ I
Sbjct: 56 LTSQEETKELTDIFRHIDKNGDGQLDRQELID--GYSKLSGEEVAVFDLPQIESEVDAIL 113
Query: 58 ALADSKRQGFLDLAEFVT-AMKLVSL 82
AD R G++D +EFVT AM SL
Sbjct: 114 GAADFDRNGYIDYSEFVTVAMDRKSL 139
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 27 DSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMK 78
D DG+G+I+ ++ GL L + K++ + DS G +D EF ++
Sbjct: 153 DQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQ 204
>pdb|1G7S|A Chain A, X-Ray Structure Of Translation Initiation Factor If2EIF5B
Complexed With Gdp
pdb|1G7T|A Chain A, X-Ray Structure Of Translation Initiation Factor If2EIF5B
Complexed With Gdpnp
Length = 594
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 67/239 (28%)
Query: 200 PMVMLLGQYSTGKTTFIKHLLRCNYPGAHIGPEPTTDRFVVVMSGPDERTIPGNTIAVHA 259
P+V +LG GKTT + H+ R V S R G T + A
Sbjct: 6 PIVSVLGHVDHGKTTLLDHI-----------------RGSAVAS----REAGGITQHIGA 44
Query: 260 -DLPFSGLTTFGGAFLSKFECSQMSHPLLDQVTFVDTPGVLSGEKQRTQRTYDFTGVISW 318
++P + G FL KF + L + F+DTPG + FT +
Sbjct: 45 TEIPMDVIEGICGDFLKKFSIRET----LPGLFFIDTPGHEA-----------FTTLRKR 89
Query: 319 FAAKCDLILLLFDPHKLDISDEFK----RVIASLRGNDDKIRVVLNKADQV------DTQ 368
A DL +L+ +DI++ FK + LR V NK D++ + +
Sbjct: 90 GGALADLAILI-----VDINEGFKPQTQEALNILRMYRTPFVVAANKIDRIHGWRVHEGR 144
Query: 369 QLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPINGEVVGPIGQELFEKEQDDLLMDL 427
M + + + L+T +VY E+VG + +E FE E+ D + D
Sbjct: 145 PFMETFSKQDIQVQQKLDT----KVY-----------ELVGKLHEEGFESERFDRVTDF 188
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGL------SKLSRQELKQIWALADS 62
F S+E ++ FD+ D+DG G I+ TK LG +++EL I D
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDIS----TKALGTVMRMLGQNPTKEELDAIIEEVDE 67
Query: 63 KRQGFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 68 DGSGTIDFEEFLVMM 82
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 14 EHQKIYREWFDIADSDGDGRITGNDATKFLG-LSKLSRQELKQIWALADSKRQGFLDLAE 72
E ++I++ + D++GDG+I+ + + L L ++ E+K + A D+ GF+ E
Sbjct: 10 ERERIFKRF----DANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQE 65
Query: 73 FVTAMKLVSLAQAGREITSDILK 95
F +A R + D+ K
Sbjct: 66 F------TDFGRANRGLLKDVAK 82
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 23 FDIADSDGDGRITGNDATKF---LGLSKLSRQELKQIWALADSKRQGFLDLAEFVT 75
+ + D+DGDG++T + T F G K+ Q +K AD+ G++ L EF+
Sbjct: 81 YKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMK-----ADANGDGYITLEEFLA 131
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQ 65
F S+E ++ FD+ D+DG G I+ + + LG + +++EL I D
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKEELDAIIEEVDEDGS 70
Query: 66 GFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 71 GTIDFEEFLVMM 82
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 50 RQELKQIWALADSKRQGFLDLAEFVTAMKLVSLAQAGREI 89
+QE+ + ++L D GFLD E AMK + REI
Sbjct: 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREI 61
>pdb|3AHJ|A Chain A, H553a Mutant Of Phosphoketolase From Bifidobacterium Breve
Length = 845
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 346 ASLRGNDDKIRVVLNKADQVDTQQLMRVYGAL--MWSLGKVLNTPEVVRVYIGSFNDKPI 403
AS N+D+++VVL A V TQ+LM AL M KV+N +++++ ND+ +
Sbjct: 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEAL 710
Query: 404 NGE 406
E
Sbjct: 711 TDE 713
>pdb|3AHI|A Chain A, H320a Mutant Of Phosphoketolase From Bifidobacterium Breve
Complexed With Acetyl Thiamine Diphosphate
Length = 845
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 346 ASLRGNDDKIRVVLNKADQVDTQQLMRVYGAL--MWSLGKVLNTPEVVRVYIGSFNDKPI 403
AS N+D+++VVL A V TQ+LM AL M KV+N +++++ ND+ +
Sbjct: 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEAL 710
Query: 404 NGE 406
E
Sbjct: 711 TDE 713
>pdb|3AHH|A Chain A, H142a Mutant Of Phosphoketolase From Bifidobacterium Breve
Complexed With Acetyl Thiamine Diphosphate
Length = 845
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 346 ASLRGNDDKIRVVLNKADQVDTQQLMRVYGAL--MWSLGKVLNTPEVVRVYIGSFNDKPI 403
AS N+D+++VVL A V TQ+LM AL M KV+N +++++ ND+ +
Sbjct: 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEAL 710
Query: 404 NGE 406
E
Sbjct: 711 TDE 713
>pdb|3AHG|A Chain A, H64a Mutant Of Phosphoketolase From Bifidobacterium Breve
Complexed With A Tricyclic Ring Form Of Thiamine
Diphosphate
Length = 845
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 346 ASLRGNDDKIRVVLNKADQVDTQQLMRVYGAL--MWSLGKVLNTPEVVRVYIGSFNDKPI 403
AS N+D+++VVL A V TQ+LM AL M KV+N +++++ ND+ +
Sbjct: 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEAL 710
Query: 404 NGE 406
E
Sbjct: 711 TDE 713
>pdb|3AHC|A Chain A, Resting Form Of Phosphoketolase From Bifidobacterium Breve
pdb|3AHD|A Chain A, Phosphoketolase From Bifidobacterium Breve Complexed With
2-Acetyl- Thiamine Diphosphate
pdb|3AHE|A Chain A, Phosphoketolase From Bifidobacterium Breve Complexed With
Dihydroxyethyl Thiamine Diphosphate
pdb|3AHF|A Chain A, Phosphoketolase From Bifidobacterium Breve Complexed With
Inorganic Phosphate
Length = 845
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 346 ASLRGNDDKIRVVLNKADQVDTQQLMRVYGAL--MWSLGKVLNTPEVVRVYIGSFNDKPI 403
AS N+D+++VVL A V TQ+LM AL M KV+N +++++ ND+ +
Sbjct: 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEAL 710
Query: 404 NGE 406
E
Sbjct: 711 TDE 713
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGND-ATKFLGLSKL-SRQELKQIWALADSKRQGFLD 69
S+E ++E F + D DGDG IT + AT L + + +EL+ + + D+ G ++
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 70 LAEFVTAM 77
EF++ M
Sbjct: 65 FDEFLSLM 72
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 23 FDIADSDGDGRITGNDATKFLGL--SKLSRQELKQIWALADSKRQGFLDLAEFVTAMK 78
F + D DG G+I+ + K S + +EL+ I D+ + G +D EFV ++
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 14/79 (17%)
Query: 8 ITFCSKEHQKIYREWFDIADSDGDGRITGNDATKFL-GLSKLSRQEL---------KQIW 57
I C KE K F++ D DG+G I N+ L L + ++QEL K I
Sbjct: 186 IKMCGKEFNKA----FELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIM 241
Query: 58 ALADSKRQGFLDLAEFVTA 76
AL+D + DLA ++A
Sbjct: 242 ALSDGGKLYRTDLALILSA 260
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 1 MEIAPSPITFCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGL------SKLSRQELK 54
M+ F S+E ++ FD+ D+DG G I+ TK LG +++EL
Sbjct: 4 MDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDIS----TKELGTVMRMLGQNPTKEELD 59
Query: 55 QIWALADSKRQGFLDLAEFVTAM 77
I D G +D EF+ M
Sbjct: 60 AIIEEVDEDGSGTIDFEEFLVMM 82
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 23 FDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKL 79
F + D D G IT D K LG L+ +EL+++ A AD +D EF+ MK
Sbjct: 15 FRLFDDDNSGTITIKDLRRVAKELG-ENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73
Query: 80 VSL 82
SL
Sbjct: 74 TSL 76
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGL------SKLSRQELKQIWALADS 62
F S+E ++ FD+ D+DG G I+ TK LG +++EL I D
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDIS----TKELGTVMRMLGQNPTKEELDAIIEEVDE 67
Query: 63 KRQGFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 68 DGSGTIDFEEFLVMM 82
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGL------SKLSRQELKQIWALADS 62
F S+E ++ FD+ D+DG G I+ TK LG +++EL I D
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDIS----TKELGTVMRMLGQNPTKEELDAIIEEVDE 67
Query: 63 KRQGFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 68 DGSGTIDFEEFLVMM 82
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGL------SKLSRQELKQIWALADS 62
F S+E ++ FD+ D+DG G I+ TK LG +++EL I D
Sbjct: 9 AFLSEEMIAEFKAAFDMFDADGGGDIS----TKELGTVMRMLGQNPTKEELDAIIEEVDE 64
Query: 63 KRQGFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 65 DGSGTIDFEEFLVMM 79
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGND-ATKFLGLSKL-SRQELKQIWALADSKRQGFLD 69
S+E ++E F + D DGDG IT + AT L + + +EL+ + + D+ G ++
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 70 LAEFVTAM 77
EF++ M
Sbjct: 65 FDEFLSLM 72
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGNDATKFLGL------SKLSRQELKQIWALADS 62
F S+E ++ FD+ D+DG G I+ TK LG +++EL I D
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDIS----TKELGTVMRMLGQNPTKEELDAIIEEVDE 67
Query: 63 KRQGFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 68 DGSGTIDFEEFLVMM 82
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 9 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 64
Query: 73 FVTAM 77
F+ M
Sbjct: 65 FLNLM 69
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 23 FDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEF 73
F + DSD G+I+ + G+S + + K + + D G +D EF
Sbjct: 424 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 12 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 73 FVTAM 77
F+ M
Sbjct: 68 FLNLM 72
>pdb|1G7R|A Chain A, X-Ray Structure Of Translation Initiation Factor If2EIF5B
Length = 594
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 91/242 (37%), Gaps = 73/242 (30%)
Query: 200 PMVMLLGQYSTGKTTFIKHLLRCNYPGAHIGPEPTTDRFVVVMSGPDERTIPGNTIAVHA 259
P+V +LG GKTT + H+ R V S R G T + A
Sbjct: 6 PIVSVLGHVDHGKTTLLDHI-----------------RGSAVAS----REAGGITQHIGA 44
Query: 260 -DLPFSGLTTFGGAFLSKFECSQMSHPLLDQVTFVDTPGVLSGEKQRTQRTYDFTGVISW 318
++P + G FL KF + L + F+DTPG + FT +
Sbjct: 45 TEIPXDVIEGICGDFLKKFSIRET----LPGLFFIDTPGHEA-----------FTTLRKR 89
Query: 319 FAAKCDLILLLFDPHKLDISDEFK----RVIASLRGNDDKIRVVLNKADQVDTQQLMRVY 374
A DL +L+ +DI++ FK + LR V NK D R++
Sbjct: 90 GGALADLAILI-----VDINEGFKPQTQEALNILRXYRTPFVVAANKID--------RIH 136
Query: 375 GALMWSLGKVLNTPEVVRVYIGSFNDKPING---------EVVGPIGQELFEKEQDDLLM 425
G W + + R + +F+ + I E+VG + +E FE E+ D +
Sbjct: 137 G---WRVHEG-------RPFXETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFDRVT 186
Query: 426 DL 427
D
Sbjct: 187 DF 188
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 12 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 73 FVTAM 77
F+ M
Sbjct: 68 FLNLM 72
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF++ M
Sbjct: 60 NGTIDFPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 11 CSKEHQKIYREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKR 64
++E ++E F + D DGDG IT TK LG S EL+ + D+
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 65 QGFLDLAEFVTAM 77
G +D EF++ M
Sbjct: 60 NGTIDFPEFLSLM 72
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 23 FDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEF 73
F + DSD G+I+ + G+S + + K + + D G +D EF
Sbjct: 447 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 497
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 23 FDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALADSKRQGFLDLAEF 73
F + DSD G+I+ + G+S + + K + + D G +D EF
Sbjct: 448 FRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 498
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 12 SKEHQKIYREWFDIADSDGDGRITGND-ATKFLGLSKL-SRQELKQIWALADSKRQGFLD 69
S+E ++E F + D DGDG IT + AT L + + +EL+ + + D+ G ++
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 70 LAEFVTAM 77
EF++ M
Sbjct: 65 FDEFLSLM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 12 FKEAFSLFDKDGDGCIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 67
Query: 73 FVTAM 77
F+ M
Sbjct: 68 FLNLM 72
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 14 EHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQGFLDL 70
E Q+ Y+E F + D D D ++T + + LG + ++Q++ +I D G D
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANP-TKQKISEIVKDYDKDNSGKFDQ 69
Query: 71 AEFVTAMKLVSLAQAGREITS 91
F+T M + G+E+ S
Sbjct: 70 ETFLTIM-----LEYGQEVDS 85
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQ 65
F S+E ++ FD+ D+DG G I+ + + LG + ++ EL I D
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-TKCELDAIICEVDEDGS 70
Query: 66 GFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 71 GTIDFEEFLVMM 82
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 13 FKEAFSLFDKDGDGCIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 73 FVTAM 77
F+ M
Sbjct: 69 FLNLM 73
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 13 FKEAFSLFDKDGDGCIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPE 68
Query: 73 FVTAM 77
F+ M
Sbjct: 69 FLNLM 73
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ + D+ G +D E
Sbjct: 304 FKEAFSLFDKDGDGTIT----TKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPE 359
Query: 73 FVTAM 77
F+ M
Sbjct: 360 FLIMM 364
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 20 REWFDIADSDGDGRITGNDATKFLGLS--KLSRQELKQIWALADSKRQGFLDLAEFV 74
RE F DS GDGR+ N+ L S ++S Q + + D +R+G L ++V
Sbjct: 96 REGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYV 152
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ D+ G +D E
Sbjct: 12 FKEAFSLFDKDGDGTIT----TKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPE 67
Query: 73 FVT 75
F+T
Sbjct: 68 FLT 70
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 19 YREWFDIADSDGDGRITGNDATKFLGLSKLS------RQELKQIWALADSKRQGFLDLAE 72
++E F + D DGDG IT TK LG S EL+ D+ G +D E
Sbjct: 13 FKEAFSLFDKDGDGTIT----TKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPE 68
Query: 73 FVT 75
F+T
Sbjct: 69 FLT 71
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 3 IAPSPITFCSKEH-QKIYREWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALAD 61
+A T S+E ++ +R + DSD G+I+ + G+S + + K + + D
Sbjct: 407 VAXDRKTLLSRERLERAFRXF----DSDNSGKISSTELATIFGVSDVDSETWKSVLSEVD 462
Query: 62 SKRQGFLDLAEF 73
G +D EF
Sbjct: 463 KNNDGEVDFDEF 474
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 EIAPSPITFCSKEHQKIYREW----FDIADSDGDGRITGNDATKFLGLSKL--SRQELKQ 55
++A S + ++ + REW FDI D DG G IT ++ + +S + S+++ +
Sbjct: 94 QLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEA 153
Query: 56 IWALADSKRQGFLDLAEFV 74
+ D G LD+ E
Sbjct: 154 TFRHCDLDNSGDLDVDEMT 172
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 EIAPSPITFCSKEHQKIYREW----FDIADSDGDGRITGNDATKFLGLSKL--SRQELKQ 55
++A S + ++ + REW FDI D DG G IT ++ + +S + S+++ +
Sbjct: 94 QLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEA 153
Query: 56 IWALADSKRQGFLDLAEFV 74
+ D G LD+ E
Sbjct: 154 TFRHCDLDNSGDLDVDEMT 172
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 20 REWFDIADSDGDGRITGNDATKFLGLSKLSRQELKQIWALAD 61
R +FD+ D + DGR+T + + + LS S +L +I AD
Sbjct: 101 RTFFDMVDKNADGRLTAEEVKEIIALSA-SANKLSKIKERAD 141
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 EIAPSPITFCSKEHQKIYREW----FDIADSDGDGRITGNDATKFLGLSKL--SRQELKQ 55
++A S + ++ + REW FDI D DG G IT ++ + +S + S+++ +
Sbjct: 94 QLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEA 153
Query: 56 IWALADSKRQGFLDLAEFV 74
+ D G LD+ E
Sbjct: 154 TFRHCDLDNSGDLDVDEMT 172
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQ 65
++ S+E ++ FD+ D+DG G I+ + + LG + +++EL I D
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTP-TKEELDAIIEEVDEDGS 67
Query: 66 GFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 68 GTIDFEEFLVMM 79
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin
(Oncomodulin) Refined With A Paramagnetism Based
Strategy
Length = 109
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 44 GLSKLSRQELKQIWALADSKRQGFLDLAEFVTAMKLVSLAQAGREITSDILKS 96
GLSK+S ++K ++ D+ + G+LD E L RE+T KS
Sbjct: 35 GLSKMSANQVKDVFRFIDNDQSGYLDEEEL--KFFLQKFESGARELTESETKS 85
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 2 EIAPSPITFCSKEHQKIYREW----FDIADSDGDGRITGNDATKFLGLSKL--SRQELKQ 55
++A S + ++ + REW FDI D DG G IT ++ + +S + S+++ +
Sbjct: 94 QLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEA 153
Query: 56 IWALADSKRQGFLDLAEFV 74
+ D G LD+ E
Sbjct: 154 TFRHCDLDNAGDLDVDEMT 172
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 9 TFCSKEHQKIYREWFDIADSDGDGRITGND---ATKFLGLSKLSRQELKQIWALADSKRQ 65
++ S+E ++ FD+ D+DG G I+ + + LG + +++EL I D
Sbjct: 9 SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTP-TKEELDAIIEEVDEDGS 67
Query: 66 GFLDLAEFVTAM 77
G +D EF+ M
Sbjct: 68 GTIDFEEFLVMM 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,509,074
Number of Sequences: 62578
Number of extensions: 703412
Number of successful extensions: 2139
Number of sequences better than 100.0: 155
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 2051
Number of HSP's gapped (non-prelim): 208
length of query: 547
length of database: 14,973,337
effective HSP length: 104
effective length of query: 443
effective length of database: 8,465,225
effective search space: 3750094675
effective search space used: 3750094675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)