Query 008957
Match_columns 547
No_of_seqs 468 out of 2430
Neff 11.1
Searched_HMMs 46136
Date Thu Mar 28 18:39:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008957.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008957hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 6.7E-42 1.4E-46 311.2 17.5 399 63-510 27-432 (448)
2 COG2814 AraJ Arabinose efflux 100.0 2.3E-39 5E-44 299.9 23.3 350 104-512 35-386 (394)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8E-40 1.7E-44 321.3 18.0 398 62-501 5-410 (412)
4 KOG1330 Sugar transporter/spin 100.0 1.5E-39 3.2E-44 298.7 17.3 378 59-491 27-417 (493)
5 PRK09556 uhpT sugar phosphate 100.0 5.2E-40 1.1E-44 328.7 15.2 398 63-511 27-448 (467)
6 PRK11663 regulatory protein Uh 100.0 6.3E-38 1.4E-42 310.6 20.4 398 64-508 22-420 (434)
7 TIGR01299 synapt_SV2 synaptic 100.0 5.4E-39 1.2E-43 327.4 12.7 427 61-516 163-735 (742)
8 PRK03545 putative arabinose tr 100.0 2.5E-37 5.5E-42 302.8 21.3 346 104-509 31-377 (390)
9 TIGR00903 2A0129 major facilit 100.0 1.9E-37 4E-42 297.8 16.2 352 101-508 10-361 (368)
10 PLN00028 nitrate transmembrane 100.0 8.4E-37 1.8E-41 305.0 19.8 362 104-512 58-433 (476)
11 PRK11551 putative 3-hydroxyphe 100.0 1E-36 2.2E-41 300.9 18.5 380 62-508 12-392 (406)
12 TIGR00892 2A0113 monocarboxyla 100.0 3.1E-36 6.8E-41 299.4 21.0 401 63-510 17-419 (455)
13 PRK10406 alpha-ketoglutarate t 100.0 1.4E-36 3E-41 301.1 17.8 372 65-509 22-421 (432)
14 PRK10642 proline/glycine betai 100.0 1.8E-36 4E-41 304.5 16.9 384 64-508 15-426 (490)
15 TIGR00894 2A0114euk Na(+)-depe 100.0 4.4E-36 9.4E-41 301.1 19.3 415 62-509 16-447 (465)
16 TIGR00893 2A0114 d-galactonate 100.0 3.3E-36 7.3E-41 297.1 17.2 377 104-509 16-396 (399)
17 PRK11273 glpT sn-glycerol-3-ph 100.0 1.1E-35 2.4E-40 296.2 19.8 400 64-512 28-435 (452)
18 PRK09705 cynX putative cyanate 100.0 1.8E-35 3.8E-40 289.2 19.9 346 103-509 30-378 (393)
19 PRK14995 methyl viologen resis 100.0 1.4E-35 3E-40 298.3 15.3 388 63-485 4-412 (495)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 2.3E-35 4.9E-40 288.9 15.7 347 104-504 25-374 (377)
21 PRK10091 MFS transport protein 100.0 1.6E-34 3.4E-39 281.9 21.0 347 104-510 25-374 (382)
22 PRK10213 nepI ribonucleoside t 100.0 1.9E-34 4.2E-39 281.5 21.1 338 104-502 42-381 (394)
23 PRK15034 nitrate/nitrite trans 100.0 2.5E-34 5.3E-39 276.9 21.4 371 62-510 31-452 (462)
24 PRK03699 putative transporter; 100.0 1E-34 2.2E-39 284.4 17.9 373 63-512 5-380 (394)
25 PRK09952 shikimate transporter 100.0 1.5E-34 3.2E-39 286.4 18.3 380 63-509 20-430 (438)
26 TIGR00891 2A0112 putative sial 100.0 5.4E-35 1.2E-39 289.1 15.2 387 61-496 8-400 (405)
27 KOG2533 Permease of the major 100.0 7.1E-35 1.5E-39 283.1 15.4 373 58-479 38-423 (495)
28 PRK12307 putative sialic acid 100.0 8.2E-35 1.8E-39 289.2 15.7 364 63-488 16-385 (426)
29 TIGR00881 2A0104 phosphoglycer 100.0 9.1E-35 2E-39 284.9 14.2 370 73-492 3-377 (379)
30 PRK15075 citrate-proton sympor 100.0 3.3E-34 7.2E-39 284.2 18.1 357 63-489 13-397 (434)
31 TIGR00887 2A0109 phosphate:H+ 100.0 2.1E-34 4.6E-39 290.7 16.7 417 62-524 13-499 (502)
32 PRK10077 xylE D-xylose transpo 100.0 2.5E-34 5.5E-39 290.2 16.9 419 63-528 10-472 (479)
33 TIGR00879 SP MFS transporter, 100.0 1.2E-34 2.6E-39 293.6 13.4 389 104-509 50-467 (481)
34 TIGR00898 2A0119 cation transp 100.0 3.1E-34 6.8E-39 291.1 16.5 377 103-509 110-492 (505)
35 PRK15402 multidrug efflux syst 100.0 1.1E-33 2.4E-38 278.9 19.7 357 64-490 12-374 (406)
36 COG2223 NarK Nitrate/nitrite t 100.0 5.9E-33 1.3E-37 253.7 21.1 373 64-510 13-399 (417)
37 KOG2532 Permease of the major 100.0 3E-34 6.4E-39 278.5 13.4 368 109-509 65-444 (466)
38 TIGR00712 glpT glycerol-3-phos 100.0 2.8E-33 6.2E-38 277.9 19.6 396 64-509 26-430 (438)
39 PRK05122 major facilitator sup 100.0 4.4E-33 9.6E-38 274.2 19.1 363 65-509 15-386 (399)
40 PRK15403 multidrug efflux syst 100.0 1.4E-32 3E-37 269.9 21.8 349 101-502 35-387 (413)
41 TIGR00710 efflux_Bcr_CflA drug 100.0 7.7E-33 1.7E-37 271.7 19.4 329 103-485 26-360 (385)
42 PRK10489 enterobactin exporter 100.0 6.3E-33 1.4E-37 274.3 18.4 365 106-526 41-412 (417)
43 TIGR00900 2A0121 H+ Antiporter 100.0 1.1E-33 2.3E-38 275.8 12.7 336 105-488 22-365 (365)
44 TIGR00711 efflux_EmrB drug res 100.0 1.5E-33 3.2E-38 285.4 13.4 396 65-486 2-410 (485)
45 PRK10504 putative transporter; 100.0 5.2E-33 1.1E-37 279.7 17.2 385 66-488 11-417 (471)
46 KOG2504 Monocarboxylate transp 100.0 2.2E-32 4.9E-37 268.9 21.0 400 106-512 70-476 (509)
47 PRK03893 putative sialic acid 100.0 4E-33 8.6E-38 282.7 16.0 400 62-501 17-442 (496)
48 PRK11646 multidrug resistance 100.0 2.5E-32 5.3E-37 267.2 20.6 326 106-488 35-361 (400)
49 PRK10133 L-fucose transporter; 100.0 4E-32 8.8E-37 267.8 19.9 363 66-500 27-421 (438)
50 PF07690 MFS_1: Major Facilita 100.0 2.3E-33 5E-38 272.0 10.5 329 104-477 18-352 (352)
51 TIGR00895 2A0115 benzoate tran 100.0 4.8E-33 1E-37 274.6 12.4 381 63-483 15-397 (398)
52 TIGR00805 oat sodium-independe 100.0 6E-31 1.3E-35 268.5 27.4 360 104-487 55-582 (633)
53 PRK09874 drug efflux system pr 100.0 5.6E-32 1.2E-36 267.5 18.8 350 104-509 36-395 (408)
54 TIGR00897 2A0118 polyol permea 100.0 1.3E-31 2.9E-36 263.0 20.9 351 106-509 37-398 (402)
55 PRK12382 putative transporter; 100.0 8E-32 1.7E-36 264.4 18.7 341 104-509 37-386 (392)
56 TIGR00899 2A0120 sugar efflux 100.0 1E-31 2.2E-36 262.7 19.2 345 107-509 23-371 (375)
57 PRK10473 multidrug efflux syst 100.0 2.2E-31 4.7E-36 261.4 19.5 325 104-488 25-351 (392)
58 PRK03633 putative MFS family t 100.0 1.2E-31 2.6E-36 261.7 17.3 356 67-505 8-365 (381)
59 TIGR00885 fucP L-fucose:H+ sym 100.0 1.7E-31 3.8E-36 261.0 18.0 360 67-501 5-401 (410)
60 PRK11102 bicyclomycin/multidru 100.0 1.7E-31 3.6E-36 261.2 17.6 331 100-481 9-344 (377)
61 PRK11195 lysophospholipid tran 100.0 5.1E-31 1.1E-35 257.3 17.5 353 106-513 27-381 (393)
62 PRK11652 emrD multidrug resist 100.0 9.1E-31 2E-35 257.2 18.5 329 103-486 29-360 (394)
63 PRK11043 putative transporter; 100.0 1.2E-30 2.7E-35 256.8 19.4 328 103-486 27-357 (401)
64 PRK10054 putative transporter; 100.0 2E-30 4.4E-35 253.3 19.5 337 106-500 32-372 (395)
65 KOG0569 Permease of the major 100.0 1.9E-30 4.1E-35 248.4 16.4 390 119-531 62-472 (485)
66 cd06174 MFS The Major Facilita 100.0 1.6E-30 3.4E-35 252.1 15.9 326 104-508 21-348 (352)
67 TIGR00896 CynX cyanate transpo 100.0 1.2E-30 2.7E-35 252.4 14.8 330 102-491 20-353 (355)
68 TIGR00886 2A0108 nitrite extru 100.0 3.4E-30 7.5E-35 250.9 17.8 324 104-470 23-364 (366)
69 TIGR00883 2A0106 metabolite-pr 100.0 7.6E-31 1.7E-35 258.5 11.8 343 106-500 17-389 (394)
70 PRK15011 sugar efflux transpor 100.0 1.5E-29 3.2E-34 247.7 20.0 344 106-509 40-388 (393)
71 TIGR00902 2A0127 phenyl propri 100.0 6.8E-30 1.5E-34 249.2 17.0 343 103-505 25-372 (382)
72 KOG0253 Synaptic vesicle trans 100.0 6.1E-30 1.3E-34 226.9 14.8 417 62-509 75-516 (528)
73 KOG0254 Predicted transporter 100.0 2.6E-29 5.6E-34 253.6 17.8 391 117-530 89-500 (513)
74 PRK11010 ampG muropeptide tran 100.0 2.8E-29 6.2E-34 251.1 17.4 352 104-510 34-401 (491)
75 KOG3764 Vesicular amine transp 100.0 5.7E-29 1.2E-33 223.9 16.0 348 109-512 98-454 (464)
76 TIGR00806 rfc RFC reduced fola 100.0 9.3E-29 2E-33 232.8 17.4 353 105-475 49-405 (511)
77 PRK06814 acylglycerophosphoeth 100.0 7.5E-29 1.6E-33 275.3 18.6 345 107-500 41-410 (1140)
78 KOG0252 Inorganic phosphate tr 100.0 3.4E-29 7.4E-34 229.4 12.7 425 64-530 40-514 (538)
79 COG0738 FucP Fucose permease [ 100.0 1.8E-28 3.8E-33 222.7 16.8 329 104-489 35-387 (422)
80 PF00083 Sugar_tr: Sugar (and 100.0 1.6E-32 3.6E-37 274.7 -10.9 384 116-527 45-450 (451)
81 PRK11128 putative 3-phenylprop 100.0 1E-28 2.2E-33 241.0 14.9 340 103-502 25-369 (382)
82 PRK08633 2-acyl-glycerophospho 100.0 3.1E-28 6.8E-33 271.6 20.1 334 106-485 34-383 (1146)
83 PF06609 TRI12: Fungal trichot 100.0 5.9E-27 1.3E-31 230.3 23.6 368 104-483 66-464 (599)
84 PRK09528 lacY galactoside perm 100.0 2.1E-28 4.5E-33 242.2 13.6 355 106-509 35-400 (420)
85 PF05977 MFS_3: Transmembrane 100.0 2.1E-27 4.5E-32 235.1 18.3 352 106-509 34-391 (524)
86 TIGR00889 2A0110 nucleoside tr 99.9 1.6E-27 3.5E-32 234.1 15.7 347 106-509 27-399 (418)
87 TIGR00901 2A0125 AmpG-related 99.9 2.6E-27 5.6E-32 229.4 16.0 314 103-469 9-355 (356)
88 COG2807 CynX Cyanate permease 99.9 1.1E-26 2.5E-31 207.6 17.3 344 103-507 33-380 (395)
89 KOG2615 Permease of the major 99.9 4.3E-27 9.3E-32 210.6 14.3 357 113-499 64-427 (451)
90 PRK11902 ampG muropeptide tran 99.9 9.2E-27 2E-31 228.9 18.2 345 104-507 21-385 (402)
91 TIGR00792 gph sugar (Glycoside 99.9 1.8E-26 3.8E-31 230.3 20.2 332 106-488 24-382 (437)
92 TIGR00882 2A0105 oligosacchari 99.9 7.3E-27 1.6E-31 229.4 15.5 351 106-507 27-390 (396)
93 KOG0255 Synaptic vesicle trans 99.9 9E-27 1.9E-31 236.8 15.9 354 109-485 110-467 (521)
94 PRK10207 dipeptide/tripeptide 99.9 8.6E-26 1.9E-30 224.7 17.7 397 106-510 39-474 (489)
95 PTZ00207 hypothetical protein; 99.9 3.3E-26 7.2E-31 226.8 14.4 399 106-511 51-551 (591)
96 TIGR00924 yjdL_sub1_fam amino 99.9 3.8E-25 8.3E-30 220.2 18.6 396 107-508 36-464 (475)
97 KOG3626 Organic anion transpor 99.9 1.1E-22 2.3E-27 201.2 30.5 360 104-487 119-650 (735)
98 TIGR02718 sider_RhtX_FptX side 99.9 1.3E-24 2.7E-29 213.1 16.8 365 67-505 3-384 (390)
99 PRK09584 tppB putative tripept 99.9 9.5E-23 2.1E-27 204.3 19.8 145 106-250 46-194 (500)
100 PF03137 OATP: Organic Anion T 99.9 1.1E-24 2.4E-29 216.5 -0.3 366 104-487 25-515 (539)
101 TIGR00788 fbt folate/biopterin 99.9 1.6E-22 3.5E-27 200.9 14.6 396 65-516 26-447 (468)
102 KOG4686 Predicted sugar transp 99.9 1.6E-23 3.4E-28 179.6 6.3 362 66-493 45-421 (459)
103 PF11700 ATG22: Vacuole efflux 99.9 1.5E-21 3.3E-26 191.4 19.1 350 117-509 70-465 (477)
104 PRK09669 putative symporter Ya 99.9 5.4E-22 1.2E-26 197.6 15.9 329 106-488 34-390 (444)
105 PRK10429 melibiose:sodium symp 99.9 4.6E-21 1E-25 192.0 18.8 334 106-488 31-395 (473)
106 PF03825 Nuc_H_symport: Nucleo 99.9 4.5E-21 9.9E-26 184.7 16.0 330 106-488 26-366 (400)
107 TIGR01301 GPH_sucrose GPH fami 99.9 1.1E-20 2.5E-25 183.9 17.3 366 106-509 28-468 (477)
108 KOG2563 Permease of the major 99.9 1.2E-20 2.6E-25 174.0 15.8 362 62-488 42-423 (480)
109 PRK15462 dipeptide/tripeptide 99.8 1.1E-19 2.5E-24 177.7 20.3 150 106-256 34-187 (493)
110 TIGR01272 gluP glucose/galacto 99.8 1.2E-20 2.6E-25 177.0 12.8 277 165-498 5-301 (310)
111 PRK09848 glucuronide transport 99.8 9.9E-20 2.1E-24 181.7 19.1 328 106-488 33-390 (448)
112 PF13347 MFS_2: MFS/sugar tran 99.8 3.6E-20 7.7E-25 183.6 15.0 331 106-488 26-386 (428)
113 COG2270 Permeases of the major 99.8 5.2E-20 1.1E-24 169.1 11.7 347 116-509 57-426 (438)
114 PRK11462 putative transporter; 99.8 1.5E-18 3.3E-23 172.5 18.2 327 106-487 34-388 (460)
115 PF01306 LacY_symp: LacY proto 99.8 1.2E-19 2.6E-24 171.0 8.5 353 107-509 33-397 (412)
116 COG2211 MelB Na+/melibiose sym 99.7 2.6E-16 5.7E-21 149.9 21.9 332 107-488 38-398 (467)
117 COG3104 PTR2 Dipeptide/tripept 99.7 2.6E-16 5.7E-21 148.3 17.4 392 108-509 52-484 (498)
118 KOG2325 Predicted transporter/ 99.7 8E-17 1.7E-21 153.7 9.7 185 62-263 31-235 (488)
119 TIGR00880 2_A_01_02 Multidrug 99.7 2.4E-16 5.2E-21 130.5 7.8 138 122-259 3-140 (141)
120 PF03209 PUCC: PUCC protein; 99.6 3E-14 6.5E-19 132.0 19.7 330 107-486 5-363 (403)
121 KOG2816 Predicted transporter 99.6 1.4E-13 3E-18 133.9 17.9 318 125-487 70-393 (463)
122 PF03092 BT1: BT1 family; Int 99.6 7.5E-15 1.6E-19 144.0 9.2 343 106-488 14-382 (433)
123 TIGR00889 2A0110 nucleoside tr 99.5 2.6E-14 5.6E-19 140.8 11.6 146 116-261 250-406 (418)
124 PRK15011 sugar efflux transpor 99.5 1.1E-13 2.5E-18 135.6 12.5 149 107-256 242-390 (393)
125 PRK10642 proline/glycine betai 99.5 1.6E-13 3.5E-18 138.4 12.5 155 108-263 277-435 (490)
126 PF05631 DUF791: Protein of un 99.5 9.9E-13 2.1E-17 120.1 16.1 234 108-389 60-302 (354)
127 PF01770 Folate_carrier: Reduc 99.5 1.5E-12 3.3E-17 122.4 17.7 352 106-470 28-387 (412)
128 PRK09528 lacY galactoside perm 99.5 1.4E-13 3.1E-18 136.4 10.9 147 112-258 257-404 (420)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 6.6E-14 1.4E-18 137.0 7.5 144 106-249 229-374 (377)
130 TIGR01299 synapt_SV2 synaptic 99.5 1.5E-13 3.4E-18 141.5 9.1 140 120-261 598-737 (742)
131 PRK05122 major facilitator sup 99.4 3.8E-13 8.2E-18 132.6 10.8 147 110-258 244-390 (399)
132 PRK10489 enterobactin exporter 99.4 1.1E-12 2.3E-17 130.1 12.9 155 106-260 247-402 (417)
133 cd06174 MFS The Major Facilita 99.4 4.4E-13 9.5E-18 129.8 9.6 150 106-255 199-350 (352)
134 PRK12382 putative transporter; 99.4 8.8E-13 1.9E-17 129.6 11.8 146 110-257 244-389 (392)
135 TIGR00899 2A0120 sugar efflux 99.4 7.9E-13 1.7E-17 129.3 11.3 148 107-255 225-372 (375)
136 PRK09874 drug efflux system pr 99.4 1.1E-12 2.5E-17 129.7 11.7 140 119-258 260-399 (408)
137 PRK03893 putative sialic acid 99.4 1.6E-12 3.5E-17 132.0 13.0 147 106-252 299-448 (496)
138 PRK11551 putative 3-hydroxyphe 99.4 9.1E-13 2E-17 130.2 9.7 152 106-257 244-396 (406)
139 TIGR00902 2A0127 phenyl propri 99.4 9.3E-13 2E-17 128.7 9.3 145 106-252 229-374 (382)
140 TIGR00892 2A0113 monocarboxyla 99.4 3.5E-13 7.7E-18 134.4 6.5 146 106-251 265-415 (455)
141 PRK03699 putative transporter; 99.4 2.6E-12 5.5E-17 126.2 11.6 149 107-256 231-379 (394)
142 TIGR00893 2A0114 d-galactonate 99.4 2.2E-12 4.7E-17 127.2 11.1 148 107-255 241-397 (399)
143 TIGR00879 SP MFS transporter, 99.4 2E-12 4.2E-17 131.0 10.9 155 106-260 308-473 (481)
144 PRK03545 putative arabinose tr 99.4 5.1E-12 1.1E-16 124.0 12.6 150 106-257 230-380 (390)
145 PRK09556 uhpT sugar phosphate 99.3 5.3E-12 1.1E-16 126.8 11.2 150 107-256 284-448 (467)
146 PRK09705 cynX putative cyanate 99.3 1E-11 2.2E-16 121.8 11.7 154 106-261 229-385 (393)
147 PRK03633 putative MFS family t 99.3 9.6E-12 2.1E-16 121.6 11.5 147 106-255 224-370 (381)
148 TIGR00883 2A0106 metabolite-pr 99.3 3.3E-12 7.2E-17 125.7 8.1 141 107-247 245-391 (394)
149 PF05977 MFS_3: Transmembrane 99.3 1.7E-11 3.6E-16 122.3 12.8 151 106-256 242-393 (524)
150 TIGR00891 2A0112 putative sial 99.3 2.9E-12 6.3E-17 126.7 6.3 137 106-242 263-401 (405)
151 TIGR00897 2A0118 polyol permea 99.3 3.4E-11 7.4E-16 118.5 12.3 149 106-256 246-400 (402)
152 KOG3762 Predicted transporter 99.3 1.9E-11 4.1E-16 116.0 9.3 189 318-512 359-547 (618)
153 PRK10077 xylE D-xylose transpo 99.2 1.8E-11 3.9E-16 123.9 9.1 155 106-260 295-460 (479)
154 PRK11128 putative 3-phenylprop 99.2 3.6E-11 7.7E-16 117.6 9.8 141 107-249 230-371 (382)
155 COG2271 UhpC Sugar phosphate p 99.2 1.6E-11 3.4E-16 113.6 6.2 174 328-509 27-203 (448)
156 PRK11663 regulatory protein Uh 99.2 3.5E-11 7.5E-16 119.7 9.3 167 331-505 24-191 (434)
157 PRK11010 ampG muropeptide tran 99.2 1.1E-10 2.4E-15 117.4 12.3 151 106-256 247-402 (491)
158 COG2814 AraJ Arabinose efflux 99.2 1.1E-10 2.4E-15 109.5 11.3 150 106-257 236-386 (394)
159 PF02487 CLN3: CLN3 protein; 99.2 1.5E-09 3.2E-14 102.5 18.7 325 115-477 57-388 (402)
160 PRK09952 shikimate transporter 99.2 1.1E-10 2.4E-15 116.1 11.8 151 106-256 275-432 (438)
161 TIGR00882 2A0105 oligosacchari 99.2 1.3E-10 2.9E-15 114.3 12.1 144 113-256 250-394 (396)
162 PRK10054 putative transporter; 99.2 3.5E-11 7.5E-16 117.9 7.9 170 329-506 6-176 (395)
163 PRK11273 glpT sn-glycerol-3-ph 99.2 8.3E-11 1.8E-15 117.6 10.7 151 107-257 279-435 (452)
164 PF06813 Nodulin-like: Nodulin 99.2 6.8E-10 1.5E-14 98.5 14.0 149 106-256 26-181 (250)
165 PRK15075 citrate-proton sympor 99.2 1.9E-10 4.2E-15 114.4 11.4 132 106-237 262-399 (434)
166 PLN00028 nitrate transmembrane 99.1 3.9E-10 8.4E-15 113.3 12.4 149 107-257 278-433 (476)
167 TIGR00900 2A0121 H+ Antiporter 99.1 3.3E-11 7.1E-16 117.3 4.1 165 336-507 5-174 (365)
168 PF11700 ATG22: Vacuole efflux 99.1 3.4E-10 7.3E-15 111.8 10.9 151 106-256 306-467 (477)
169 TIGR00712 glpT glycerol-3-phos 99.1 4.4E-10 9.6E-15 112.0 11.7 153 107-259 277-435 (438)
170 TIGR00881 2A0104 phosphoglycer 99.1 8.4E-11 1.8E-15 115.1 6.4 134 106-239 241-379 (379)
171 KOG3098 Uncharacterized conser 99.1 3.4E-09 7.4E-14 101.8 17.0 309 119-475 51-403 (461)
172 TIGR00924 yjdL_sub1_fam amino 99.1 8.4E-11 1.8E-15 117.6 6.2 172 330-508 10-188 (475)
173 TIGR02718 sider_RhtX_FptX side 99.1 4E-10 8.6E-15 110.6 10.4 146 106-251 232-385 (390)
174 TIGR00887 2A0109 phosphate:H+ 99.1 5.4E-10 1.2E-14 113.4 11.5 155 106-261 312-492 (502)
175 PRK10504 putative transporter; 99.1 6.6E-10 1.4E-14 112.1 11.5 130 106-235 285-418 (471)
176 PRK15462 dipeptide/tripeptide 99.1 1.4E-10 3.1E-15 114.2 6.3 175 328-509 7-186 (493)
177 KOG4332 Predicted sugar transp 99.1 7.5E-10 1.6E-14 95.4 9.5 312 106-470 61-391 (454)
178 PRK11902 ampG muropeptide tran 99.1 1E-09 2.2E-14 108.2 11.9 147 106-256 234-389 (402)
179 PRK08633 2-acyl-glycerophospho 99.1 5.9E-10 1.3E-14 125.3 11.6 151 106-256 257-409 (1146)
180 PRK12307 putative sialic acid 99.1 4.4E-10 9.6E-15 111.9 9.3 137 106-242 255-393 (426)
181 TIGR00898 2A0119 cation transp 99.1 1.2E-09 2.5E-14 111.4 12.1 138 121-261 359-498 (505)
182 KOG4686 Predicted sugar transp 99.1 2.7E-09 5.9E-14 92.9 12.2 176 61-257 263-442 (459)
183 KOG2504 Monocarboxylate transp 99.1 5.6E-10 1.2E-14 110.9 9.2 152 106-257 322-476 (509)
184 TIGR00792 gph sugar (Glycoside 99.0 1.1E-09 2.4E-14 109.4 11.4 121 115-235 255-383 (437)
185 PF07690 MFS_1: Major Facilita 99.0 9.9E-11 2.1E-15 113.3 3.7 163 338-507 4-167 (352)
186 COG2270 Permeases of the major 99.0 9.5E-10 2.1E-14 102.2 9.8 143 109-251 280-423 (438)
187 PRK15402 multidrug efflux syst 99.0 2.1E-09 4.5E-14 106.2 13.0 148 108-256 242-394 (406)
188 TIGR00895 2A0115 benzoate tran 99.0 2.1E-10 4.5E-15 113.2 5.8 124 106-229 274-397 (398)
189 PRK10406 alpha-ketoglutarate t 99.0 1.4E-09 3.1E-14 108.1 11.7 148 107-255 269-422 (432)
190 PRK10213 nepI ribonucleoside t 99.0 1.6E-09 3.5E-14 106.1 11.4 145 106-252 241-386 (394)
191 TIGR01272 gluP glucose/galacto 99.0 1.1E-09 2.4E-14 102.9 9.8 130 111-243 172-301 (310)
192 PRK09584 tppB putative tripept 99.0 4.9E-10 1.1E-14 112.9 7.5 178 325-509 15-198 (500)
193 PRK06814 acylglycerophosphoeth 99.0 1.6E-09 3.4E-14 121.5 12.2 149 107-255 251-420 (1140)
194 PRK10091 MFS transport protein 99.0 1.9E-09 4.1E-14 105.4 11.3 150 106-257 224-376 (382)
195 KOG0569 Permease of the major 99.0 3.9E-09 8.5E-14 102.4 13.1 156 106-262 294-459 (485)
196 PRK10207 dipeptide/tripeptide 99.0 5E-10 1.1E-14 112.1 7.2 174 329-509 13-191 (489)
197 PRK11646 multidrug resistance 99.0 1.7E-09 3.6E-14 106.3 10.3 147 106-252 232-383 (400)
198 TIGR00710 efflux_Bcr_CflA drug 99.0 5.3E-10 1.2E-14 109.7 6.6 155 346-508 21-176 (385)
199 TIGR00769 AAA ADP/ATP carrier 99.0 6E-08 1.3E-12 94.7 19.7 253 106-395 27-333 (472)
200 PF01306 LacY_symp: LacY proto 99.0 1.9E-09 4.2E-14 102.4 8.7 148 112-259 254-402 (412)
201 TIGR02332 HpaX 4-hydroxyphenyl 99.0 8.5E-10 1.9E-14 108.8 6.6 167 333-506 11-183 (412)
202 KOG0253 Synaptic vesicle trans 99.0 2.8E-09 6.1E-14 96.5 9.1 132 126-259 390-521 (528)
203 PRK10473 multidrug efflux syst 99.0 8.2E-10 1.8E-14 108.6 6.2 166 335-508 8-174 (392)
204 PRK14995 methyl viologen resis 98.9 8.9E-10 1.9E-14 111.4 6.0 168 332-507 8-177 (495)
205 PF03825 Nuc_H_symport: Nucleo 98.9 3.4E-09 7.4E-14 102.7 9.2 154 106-259 231-397 (400)
206 TIGR00711 efflux_EmrB drug res 98.9 9.4E-10 2E-14 111.6 5.6 167 334-508 6-173 (485)
207 TIGR00894 2A0114euk Na(+)-depe 98.9 3.3E-09 7.1E-14 106.8 9.4 150 107-257 287-450 (465)
208 TIGR00896 CynX cyanate transpo 98.9 2.4E-09 5.3E-14 103.7 7.8 128 106-234 221-350 (355)
209 TIGR00886 2A0108 nitrite extru 98.9 2.1E-09 4.6E-14 104.7 7.1 158 332-496 3-171 (366)
210 PRK11195 lysophospholipid tran 98.9 1.2E-08 2.6E-13 100.0 11.9 148 107-256 231-379 (393)
211 PRK11043 putative transporter; 98.9 2.5E-09 5.5E-14 105.5 7.2 157 345-508 18-177 (401)
212 COG2223 NarK Nitrate/nitrite t 98.9 1.1E-08 2.4E-13 95.2 10.7 147 106-257 243-401 (417)
213 KOG1330 Sugar transporter/spin 98.9 4.6E-10 1E-14 105.1 1.3 151 361-517 63-214 (493)
214 PF06963 FPN1: Ferroportin1 (F 98.8 9E-08 1.9E-12 92.4 15.5 332 119-472 40-405 (432)
215 KOG2615 Permease of the major 98.8 2.9E-09 6.3E-14 97.0 4.8 143 367-516 70-215 (451)
216 PRK11102 bicyclomycin/multidru 98.8 3.1E-09 6.7E-14 103.9 5.4 149 351-507 12-161 (377)
217 PRK15034 nitrate/nitrite trans 98.8 5.6E-09 1.2E-13 101.8 7.0 146 330-482 34-185 (462)
218 PRK11652 emrD multidrug resist 98.8 8.4E-09 1.8E-13 101.5 7.9 147 351-505 29-176 (394)
219 KOG3810 Micronutrient transpor 98.8 2.5E-08 5.5E-13 89.6 9.6 371 106-507 29-416 (433)
220 COG0477 ProP Permeases of the 98.8 9.8E-09 2.1E-13 97.6 7.7 144 106-249 26-177 (338)
221 PRK10133 L-fucose transporter; 98.8 3.2E-08 7E-13 98.2 11.4 137 109-248 287-424 (438)
222 PF06779 DUF1228: Protein of u 98.8 2.3E-09 5E-14 76.3 2.1 77 98-174 8-84 (85)
223 KOG0637 Sucrose transporter an 98.8 2.4E-08 5.2E-13 93.5 9.1 125 106-230 56-203 (498)
224 PF13347 MFS_2: MFS/sugar tran 98.8 5.5E-08 1.2E-12 96.7 12.4 121 112-233 256-385 (428)
225 PRK15403 multidrug efflux syst 98.8 8.9E-09 1.9E-13 101.6 6.5 141 360-507 45-186 (413)
226 KOG3762 Predicted transporter 98.8 2.7E-08 5.8E-13 95.0 9.2 148 109-256 398-546 (618)
227 PRK09848 glucuronide transport 98.8 1.9E-08 4E-13 100.7 8.9 128 108-235 255-391 (448)
228 TIGR00901 2A0125 AmpG-related 98.8 1.2E-08 2.7E-13 98.8 7.2 111 106-216 233-355 (356)
229 TIGR00788 fbt folate/biopterin 98.7 7.1E-08 1.5E-12 96.4 11.8 125 110-234 281-415 (468)
230 TIGR00880 2_A_01_02 Multidrug 98.7 9.8E-09 2.1E-13 84.5 4.5 129 373-508 6-134 (141)
231 PRK10429 melibiose:sodium symp 98.7 7.9E-08 1.7E-12 96.7 11.2 121 115-235 264-396 (473)
232 KOG3764 Vesicular amine transp 98.7 2.6E-08 5.6E-13 91.6 6.8 150 108-257 297-454 (464)
233 TIGR00926 2A1704 Peptide:H+ sy 98.7 1.1E-07 2.4E-12 97.3 11.5 152 106-257 12-182 (654)
234 TIGR00903 2A0129 major facilit 98.7 1.2E-07 2.6E-12 91.6 10.9 143 106-254 216-362 (368)
235 PF06609 TRI12: Fungal trichot 98.7 3E-08 6.6E-13 98.9 6.7 181 326-515 36-220 (599)
236 TIGR00885 fucP L-fucose:H+ sym 98.7 2.8E-08 6.1E-13 97.7 6.4 167 333-506 6-201 (410)
237 TIGR00806 rfc RFC reduced fola 98.6 5.4E-08 1.2E-12 93.4 6.8 133 350-492 46-180 (511)
238 COG2807 CynX Cyanate permease 98.6 2.3E-07 4.9E-12 84.7 10.4 152 106-258 232-386 (395)
239 PRK09669 putative symporter Ya 98.6 4.3E-07 9.4E-12 90.7 12.5 118 118-235 265-391 (444)
240 PF00083 Sugar_tr: Sugar (and 98.6 2.9E-09 6.4E-14 106.8 -3.3 155 106-262 277-441 (451)
241 KOG3574 Acetyl-CoA transporter 98.6 7.7E-06 1.7E-10 75.0 18.4 353 64-487 30-432 (510)
242 TIGR01301 GPH_sucrose GPH fami 98.6 2E-07 4.2E-12 91.8 8.8 168 336-509 10-215 (477)
243 TIGR00805 oat sodium-independe 98.5 8.1E-08 1.8E-12 99.2 5.7 151 351-508 54-277 (633)
244 KOG0255 Synaptic vesicle trans 98.5 2.3E-07 4.9E-12 94.9 6.4 130 369-508 122-251 (521)
245 PTZ00207 hypothetical protein; 98.5 2.2E-07 4.7E-12 93.5 6.0 153 346-510 43-203 (591)
246 KOG2532 Permease of the major 98.4 5.8E-07 1.3E-11 88.5 8.4 146 361-512 68-216 (466)
247 PF03209 PUCC: PUCC protein; 98.4 6.2E-06 1.3E-10 77.5 14.7 149 106-254 233-395 (403)
248 COG2211 MelB Na+/melibiose sym 98.4 4.6E-06 9.9E-11 80.6 12.2 125 108-232 263-396 (467)
249 KOG1237 H+/oligopeptide sympor 98.3 1.9E-05 4.2E-10 79.6 16.8 152 106-257 62-245 (571)
250 PRK11462 putative transporter; 98.3 3.1E-06 6.7E-11 84.6 8.7 119 117-235 263-390 (460)
251 COG3104 PTR2 Dipeptide/tripept 98.3 2.1E-07 4.5E-12 89.0 0.2 177 329-512 20-206 (498)
252 KOG0252 Inorganic phosphate tr 98.2 8.4E-07 1.8E-11 83.4 3.4 131 128-262 359-502 (538)
253 KOG0254 Predicted transporter 98.2 1.3E-05 2.8E-10 81.6 11.8 156 106-262 319-488 (513)
254 PF05978 UNC-93: Ion channel r 98.2 6.1E-06 1.3E-10 67.7 7.5 109 120-229 40-148 (156)
255 COG0738 FucP Fucose permease [ 98.1 7.2E-06 1.6E-10 76.3 7.8 142 106-250 260-402 (422)
256 KOG2533 Permease of the major 98.1 1.5E-06 3.2E-11 85.9 3.5 135 369-509 85-224 (495)
257 PF03219 TLC: TLC ATP/ADP tran 98.0 0.00015 3.3E-09 71.6 15.3 245 115-395 56-349 (491)
258 PF13000 Acatn: Acetyl-coenzym 98.0 0.00022 4.7E-09 68.6 15.4 55 431-486 413-467 (544)
259 COG3202 ATP/ADP translocase [E 98.0 0.00046 1E-08 66.3 17.2 253 106-395 47-352 (509)
260 KOG3880 Predicted small molecu 98.0 0.0004 8.7E-09 62.1 14.6 138 119-261 64-203 (409)
261 TIGR00939 2a57 Equilibrative N 97.9 0.00048 1E-08 67.7 16.3 52 169-225 105-156 (437)
262 KOG2816 Predicted transporter 97.9 0.00011 2.3E-09 72.4 10.5 124 106-230 266-390 (463)
263 PF12832 MFS_1_like: MFS_1 lik 97.8 2.4E-05 5.2E-10 55.6 3.3 55 103-157 21-75 (77)
264 PF00854 PTR2: POT family; In 97.7 5.6E-05 1.2E-09 73.5 5.4 108 148-255 2-121 (372)
265 PF02487 CLN3: CLN3 protein; 97.5 0.00013 2.8E-09 69.6 5.2 114 112-229 276-394 (402)
266 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0011 2.3E-08 58.4 10.1 56 202-257 2-62 (267)
267 PF06813 Nodulin-like: Nodulin 97.5 6.4E-05 1.4E-09 67.1 2.4 132 345-485 17-156 (250)
268 KOG2325 Predicted transporter/ 97.2 0.0011 2.3E-08 64.7 7.4 136 369-510 75-227 (488)
269 PRK03612 spermidine synthase; 97.2 0.0027 5.8E-08 64.1 10.5 142 108-251 41-191 (521)
270 KOG1479 Nucleoside transporter 97.1 0.0069 1.5E-07 57.5 11.4 99 374-477 292-396 (406)
271 TIGR00926 2A1704 Peptide:H+ sy 96.9 0.00075 1.6E-08 69.7 3.6 128 378-511 36-181 (654)
272 PF03092 BT1: BT1 family; Int 96.6 0.0053 1.2E-07 60.8 6.8 121 114-234 252-382 (433)
273 KOG2563 Permease of the major 96.4 0.011 2.3E-07 56.6 7.1 154 110-263 294-456 (480)
274 PF05631 DUF791: Protein of un 96.2 0.0039 8.5E-08 58.0 3.3 142 360-507 63-211 (354)
275 PF03137 OATP: Organic Anion T 96.1 0.00091 2E-08 67.7 -1.6 57 356-417 28-85 (539)
276 KOG2601 Iron transporter [Inor 96.0 0.17 3.6E-06 47.3 12.4 122 127-248 73-217 (503)
277 PF01770 Folate_carrier: Reduc 96.0 0.024 5.3E-07 54.4 7.5 123 381-510 57-180 (412)
278 PF06963 FPN1: Ferroportin1 (F 96.0 0.018 3.9E-07 56.2 6.7 119 112-230 288-416 (432)
279 KOG0637 Sucrose transporter an 95.9 0.049 1.1E-06 52.3 9.2 145 336-481 38-200 (498)
280 KOG3098 Uncharacterized conser 95.8 0.077 1.7E-06 52.0 10.2 104 125-229 287-411 (461)
281 PF01733 Nucleoside_tran: Nucl 95.8 0.0019 4.1E-08 60.8 -0.8 102 371-478 188-302 (309)
282 TIGR00939 2a57 Equilibrative N 95.8 0.072 1.6E-06 52.6 10.1 108 120-228 310-430 (437)
283 PF12832 MFS_1_like: MFS_1 lik 95.6 0.006 1.3E-07 43.4 1.3 60 336-396 6-66 (77)
284 TIGR00769 AAA ADP/ATP carrier 95.4 0.098 2.1E-06 51.8 9.4 55 429-484 134-189 (472)
285 PF05978 UNC-93: Ion channel r 94.6 0.017 3.8E-07 47.5 1.6 101 372-479 44-144 (156)
286 COG0477 ProP Permeases of the 93.5 0.18 4E-06 47.1 6.6 112 370-486 44-158 (338)
287 KOG3626 Organic anion transpor 93.5 0.18 3.9E-06 52.1 6.6 150 355-510 121-341 (735)
288 PF00854 PTR2: POT family; In 91.9 0.21 4.7E-06 48.5 4.7 86 424-511 34-122 (372)
289 PF03219 TLC: TLC ATP/ADP tran 91.0 1.9 4.1E-05 43.2 10.1 40 445-485 166-205 (491)
290 PF01733 Nucleoside_tran: Nucl 90.6 0.069 1.5E-06 50.3 -0.2 108 121-228 186-306 (309)
291 PF13000 Acatn: Acetyl-coenzym 90.5 0.58 1.2E-05 45.9 5.8 62 336-397 6-72 (544)
292 KOG1479 Nucleoside transporter 89.8 1.2 2.7E-05 42.7 7.3 107 119-226 284-399 (406)
293 PRK03612 spermidine synthase; 89.3 0.98 2.1E-05 45.9 6.7 58 430-489 117-175 (521)
294 KOG4332 Predicted sugar transp 88.3 4 8.6E-05 36.7 8.8 139 118-256 283-430 (454)
295 PF06779 DUF1228: Protein of u 88.2 0.24 5.3E-06 35.7 1.1 75 346-426 8-83 (85)
296 KOG3880 Predicted small molecu 87.6 0.18 3.8E-06 45.8 0.1 120 110-229 280-401 (409)
297 KOG3097 Predicted membrane pro 87.1 1.3 2.7E-05 41.0 5.2 75 126-201 67-141 (390)
298 KOG4830 Predicted sugar transp 84.4 0.029 6.3E-07 49.2 -6.1 43 323-365 194-236 (412)
299 PF03547 Mem_trans: Membrane t 81.6 31 0.00068 33.6 12.9 24 320-343 235-258 (385)
300 KOG3574 Acetyl-CoA transporter 80.3 3.9 8.3E-05 38.9 5.4 64 330-397 31-100 (510)
301 PF07672 MFS_Mycoplasma: Mycop 76.1 15 0.00033 33.1 7.7 101 120-221 144-254 (267)
302 PF06912 DUF1275: Protein of u 74.0 18 0.00038 31.8 7.8 46 197-243 153-198 (209)
303 KOG3810 Micronutrient transpor 72.7 14 0.00031 34.8 6.8 109 120-231 274-384 (433)
304 COG5336 Uncharacterized protei 72.1 10 0.00022 28.4 4.6 39 120-158 45-84 (116)
305 KOG1277 Endosomal membrane pro 71.8 59 0.0013 31.7 10.6 41 373-414 335-375 (593)
306 COG4262 Predicted spermidine s 69.0 20 0.00043 33.8 6.8 85 113-197 39-132 (508)
307 COG3202 ATP/ADP translocase [E 67.9 1.4E+02 0.003 30.0 13.8 78 431-509 292-370 (509)
308 KOG1237 H+/oligopeptide sympor 62.4 7.5 0.00016 40.0 3.3 163 344-512 51-245 (571)
309 PF06679 DUF1180: Protein of u 60.3 17 0.00037 30.1 4.4 15 492-506 96-110 (163)
310 COG4769 Predicted membrane pro 59.6 15 0.00032 30.0 3.8 52 125-182 81-132 (181)
311 PF02535 Zip: ZIP Zinc transpo 59.0 80 0.0017 29.7 9.6 34 169-202 259-293 (317)
312 PF11151 DUF2929: Protein of u 54.4 52 0.0011 21.7 5.1 44 213-256 9-52 (57)
313 COG5336 Uncharacterized protei 52.9 25 0.00055 26.4 3.8 33 455-488 38-70 (116)
314 PF02694 UPF0060: Uncharacteri 49.1 36 0.00078 25.6 4.1 52 117-168 54-105 (107)
315 PRK10263 DNA translocase FtsK; 48.4 41 0.00089 37.9 6.1 20 217-236 142-161 (1355)
316 KOG2881 Predicted membrane pro 47.3 18 0.00039 32.1 2.7 21 325-345 202-222 (294)
317 KOG2601 Iron transporter [Inor 45.5 67 0.0014 30.9 6.2 30 472-502 187-216 (503)
318 PF07857 DUF1632: CEO family ( 45.3 54 0.0012 29.6 5.5 6 390-395 20-25 (254)
319 PF01102 Glycophorin_A: Glycop 45.0 28 0.00061 27.2 3.2 10 493-502 67-76 (122)
320 COG2119 Predicted membrane pro 43.8 85 0.0018 26.5 5.9 78 66-162 101-179 (190)
321 PRK02237 hypothetical protein; 43.5 58 0.0013 24.6 4.5 52 117-168 56-107 (109)
322 PF11299 DUF3100: Protein of u 39.9 10 0.00022 33.1 0.2 102 103-226 125-226 (241)
323 PF00909 Ammonium_transp: Ammo 38.6 79 0.0017 31.1 6.1 29 203-231 108-136 (399)
324 PF12805 FUSC-like: FUSC-like 37.9 1.2E+02 0.0026 28.1 6.9 40 150-189 2-42 (284)
325 PF02990 EMP70: Endomembrane p 37.8 1E+02 0.0022 31.6 6.9 24 372-395 304-327 (521)
326 COG1268 BioY Uncharacterized c 37.6 89 0.0019 26.6 5.3 26 123-148 88-113 (184)
327 PF11947 DUF3464: Protein of u 36.1 67 0.0015 26.3 4.2 51 168-221 95-145 (153)
328 PF07760 DUF1616: Protein of u 35.7 2.3E+02 0.0051 26.3 8.4 57 173-230 22-78 (287)
329 PF10183 ESSS: ESSS subunit of 35.5 46 0.001 25.3 3.1 31 230-260 54-84 (105)
330 COG1230 CzcD Co/Zn/Cd efflux s 35.3 77 0.0017 29.4 5.0 126 106-243 49-192 (296)
331 PF11947 DUF3464: Protein of u 34.9 39 0.00084 27.6 2.7 32 439-470 110-141 (153)
332 COG3619 Predicted membrane pro 34.9 3.3E+02 0.0071 24.2 10.2 30 117-146 55-84 (226)
333 PRK10263 DNA translocase FtsK; 34.1 2.2E+02 0.0049 32.5 8.9 17 472-488 143-159 (1355)
334 COG1457 CodB Purine-cytosine p 33.4 5E+02 0.011 25.9 12.6 61 195-255 10-71 (442)
335 PF09527 ATPase_gene1: Putativ 33.0 1.3E+02 0.0028 19.5 4.5 36 124-159 7-43 (55)
336 PF02632 BioY: BioY family; I 32.4 82 0.0018 25.8 4.3 40 123-162 59-98 (148)
337 PF03547 Mem_trans: Membrane t 32.1 21 0.00046 34.8 1.0 8 385-392 15-22 (385)
338 TIGR01666 YCCS hypothetical me 30.6 1.3E+02 0.0029 32.1 6.5 53 137-189 43-100 (704)
339 PF06645 SPC12: Microsomal sig 30.4 1.1E+02 0.0024 21.6 4.1 49 209-263 11-59 (76)
340 PF03606 DcuC: C4-dicarboxylat 29.7 6E+02 0.013 25.7 10.8 19 238-256 4-22 (465)
341 PF04226 Transgly_assoc: Trans 28.7 1.6E+02 0.0034 18.6 4.5 37 218-254 7-43 (48)
342 PTZ00370 STEVOR; Provisional 27.8 1.5E+02 0.0033 27.1 5.4 14 317-330 109-122 (296)
343 PF15048 OSTbeta: Organic solu 27.7 1.2E+02 0.0025 23.8 4.0 19 489-507 34-52 (125)
344 TIGR00844 c_cpa1 na(+)/h(+) an 27.6 2.5E+02 0.0055 30.3 7.7 38 210-247 105-142 (810)
345 TIGR03644 marine_trans_1 proba 27.3 1.1E+02 0.0024 29.9 5.0 272 203-540 123-403 (404)
346 TIGR01667 YCCS_YHJK integral m 27.1 2E+02 0.0044 30.8 7.1 55 135-189 41-100 (701)
347 PF07456 Hpre_diP_synt_I: Hept 26.9 1.6E+02 0.0034 24.1 4.9 52 123-180 67-118 (148)
348 TIGR02230 ATPase_gene1 F0F1-AT 26.2 2E+02 0.0044 21.6 5.0 49 207-255 44-96 (100)
349 TIGR00927 2A1904 K+-dependent 25.8 3.9E+02 0.0084 29.6 8.6 55 106-162 957-1011(1096)
350 COG2962 RarD Predicted permeas 25.5 3E+02 0.0066 25.4 6.8 34 321-354 60-93 (293)
351 PF12273 RCR: Chitin synthesis 25.3 52 0.0011 26.2 2.0 22 236-257 1-22 (130)
352 KOG2765 Predicted membrane pro 24.0 1.7E+02 0.0038 28.0 5.2 24 141-166 208-231 (416)
353 COG2233 UraA Xanthine/uracil p 24.0 7.4E+02 0.016 24.8 11.3 102 107-208 39-143 (451)
354 PF02554 CstA: Carbon starvati 23.8 5.1E+02 0.011 25.1 8.3 36 196-236 47-83 (376)
355 PRK14229 camphor resistance pr 23.0 1.8E+02 0.0039 22.3 4.4 48 153-200 32-79 (108)
356 TIGR01666 YCCS hypothetical me 22.6 7.4E+02 0.016 26.7 10.2 53 386-438 44-96 (704)
357 PF10785 NADH-u_ox-rdase: NADH 22.5 1.7E+02 0.0036 21.3 3.9 42 128-169 29-77 (86)
358 PF03408 Foamy_virus_ENV: Foam 22.3 1.8E+02 0.004 30.8 5.4 63 451-519 917-979 (981)
359 PRK13712 conjugal transfer pro 21.8 60 0.0013 23.3 1.4 50 132-181 16-67 (115)
360 PRK10720 uracil transporter; P 21.4 4.2E+02 0.0092 26.4 7.8 28 236-263 384-411 (428)
361 PF07172 GRP: Glycine rich pro 21.3 1.8E+02 0.004 21.6 3.9 8 493-500 5-12 (95)
362 TIGR01667 YCCS_YHJK integral m 20.5 8.4E+02 0.018 26.3 10.1 54 385-438 43-96 (701)
363 PF07857 DUF1632: CEO family ( 20.3 2.6E+02 0.0056 25.4 5.5 18 343-360 191-208 (254)
364 KOG4112 Signal peptidase subun 20.1 91 0.002 22.8 2.0 28 472-502 35-62 (101)
365 PRK10692 hypothetical protein; 20.0 1.9E+02 0.0041 20.9 3.5 18 146-163 3-20 (92)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-42 Score=311.19 Aligned_cols=399 Identities=17% Similarity=0.165 Sum_probs=323.3
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
+++++..+++++...|+.|.+++. +.|.+.+|.++|.+|+|++.+++.+.|+++.+..|.++|
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~-----------------a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD 89 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNL-----------------AMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSD 89 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhh-----------------ccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 356888889999999999999997 449999999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (547)
|.+.|+.+.+++++.++.+++.+++++.+.+.++.+++|.++|..+|.+...++.|++++|||+..++++.+.++|..+.
T Consensus 90 r~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~ 169 (448)
T COG2271 90 RSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALA 169 (448)
T ss_pred cCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhH--HhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchh
Q 008957 223 YVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQAS 300 (547)
Q Consensus 223 ~~l~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (547)
|++. +++..+.+||..|++.+++++++++..++..+++|....-+.-++...+ ..+.. +
T Consensus 170 ~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d------------------~~e~~-~ 230 (448)
T COG2271 170 PLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGD------------------PLEIY-E 230 (448)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcC------------------chhhh-h
Confidence 9999 8999888999999999999999999999998876655443322221100 00000 0
Q ss_pred hhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhccccc
Q 008957 301 ERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGI 379 (547)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 379 (547)
++++++ . ......-.+.+++||.+|.+.++.++....-+++..|.|.|+.+..+.+.... ...+++-.+++
T Consensus 231 ~~~~~~-~-------ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl 302 (448)
T COG2271 231 EEKENE-G-------LTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGL 302 (448)
T ss_pred hhccCC-C-------ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhh
Confidence 000000 0 00000234678999999999999999999999999999999999999997555 44567779999
Q ss_pred ccceeeeeeeeccc--ccchhHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhcCccceeeeecccCCc
Q 008957 380 VGTISGGFILDQMG--ATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 455 (547)
Q Consensus 380 ~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (547)
+|.+++||++||+- ||. ...++..+...++.+.....+ +.+...+++++.|++..+-...+.....|..|++
T Consensus 303 ~G~Ll~GwlSDklfkgrR~----p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~ 378 (448)
T COG2271 303 PGTLLAGWLSDKLFKGRRG----PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKK 378 (448)
T ss_pred HHHHHHHHHHHHhcccccc----hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHh
Confidence 99999999999975 442 233333333333333333333 3466777777788887777666677778888889
Q ss_pred chhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 456 LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 456 ~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
..|++.|+...+.+++|.+.+....|++.|.+| |...|++..+.++++.++++.
T Consensus 379 AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 379 AAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred hccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999899999999999999865 888888888777776666554
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-39 Score=299.88 Aligned_cols=350 Identities=19% Similarity=0.220 Sum_probs=288.0
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|++.+|+|+|..+.|++.|.|.+++.++.++...+.||+.||++++..+.++.++++++++++||+.++++|++.|+.
T Consensus 35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a 114 (394)
T COG2814 35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLA 114 (394)
T ss_pred chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+|||+.|++.+.++++..+..+..+| ++.
T Consensus 115 ~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~ 192 (394)
T COG2814 115 HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE 192 (394)
T ss_pred HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998888 111
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
.+++.+.. ..+...++|+|..+...+..++..
T Consensus 193 --~~~~~~~~----------------------------------------------~~~~~~~l~~p~v~~~l~~t~l~~ 224 (394)
T COG2814 193 --ISGSLPGP----------------------------------------------LRTLLRLLRRPGVLLGLLATFLFM 224 (394)
T ss_pred --CCCCCCcc----------------------------------------------hhHHHHHhcCchHHHHHHHHHHHH
Confidence 11111000 022456789999999999999999
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH-HHHHHHhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLTAFCLS 421 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 421 (547)
...+...+|...++++..+.+.... ....+++++.++|++++|++.|| +.+ +.+.....+.... ..+....+
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----~~l~~~~~l~a~~~l~l~~~~~ 298 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR-----RALIAALLLLALALLALTFTGA 298 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch-----hHHHHHHHHHHHHHHHHHHhcc
Confidence 9888888888889999998886554 55577889999999999999999 655 4554443333333 33444445
Q ss_pred hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHH
Q 008957 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 501 (547)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 501 (547)
+.+...+..++.++..............+ ..|+.+..+.++.....|+ |..+|..++|.+.|+.| +....++.+...
T Consensus 299 ~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA~lGG~v~~~~g-~~~~~~~~a~l~ 375 (394)
T COG2814 299 SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNL-GIALGAALGGLVLDALG-YAATGWVGAALL 375 (394)
T ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhc-hHHHHHHHHHHH
Confidence 55555555555555554444444444444 4578999999999999998 99999999999999955 778888888777
Q ss_pred HHHHHHHHHHH
Q 008957 502 FLAAGIWFVGI 512 (547)
Q Consensus 502 ~~~~~~~~~~~ 512 (547)
+++.++.+...
T Consensus 376 ~~a~~~~~~~~ 386 (394)
T COG2814 376 LLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHH
Confidence 77666665433
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8e-40 Score=321.35 Aligned_cols=398 Identities=16% Similarity=0.211 Sum_probs=283.3
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 141 (547)
.+|+.+.++++.++++++|+.+++.+ .|.+.+|+|++..+.|++.+++.+++.+++++.|+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 67 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFA-----------------GLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIML 67 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHH-----------------HHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 35678888999999999999999873 3889999999999999999999999999999999999
Q ss_pred hhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
||+|||+++..++++++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.++
T Consensus 68 dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 68 AIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHhhcC------CCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccccccc
Q 008957 222 GYVYGGVVGS------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 295 (547)
Q Consensus 222 g~~l~~~l~~------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (547)
++++++++.+ ..|||+.|++.++++++..++.+++.||++...+...+++....++ ..+..... .
T Consensus 148 ~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~---~~~~~~~~------~ 218 (412)
T TIGR02332 148 GLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKE---MIDNDQLT------L 218 (412)
T ss_pred HHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHH---HHHhcccc------c
Confidence 9999988763 4699999999999988877777777777553211000000000000 00000000 0
Q ss_pred ccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEee-ccCchhh-Hhhhhh
Q 008957 296 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNAD-MMFGGV 373 (547)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~-~~~~~~ 373 (547)
++ .+....+. . . .....++.++ ++.++...+..++.....+.+.+|+|.++++. .+.+... ..+...
T Consensus 219 ~~-~~~~~~~~-~-----~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~ 287 (412)
T TIGR02332 219 EQ-PEGAFAHA-A-----M---PQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAI 287 (412)
T ss_pred cc-cccccccc-c-----c---cHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhH
Confidence 00 00000000 0 0 0012234444 47778878878888888888999999999873 3444333 345567
Q ss_pred hcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccC
Q 008957 374 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK 453 (547)
Q Consensus 374 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (547)
..++.+++.++.|+++||+++|+ ........+.....++.....+.......+++..++.....+.......+..|
T Consensus 288 ~~l~~~~g~l~~g~l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 363 (412)
T TIGR02332 288 PQFCTIFGMIWWSRHSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSIS 363 (412)
T ss_pred HHHHHHHHHHHHHHHhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccc
Confidence 78889999999999999999773 22222222222222222222222222222222222222222222233345577
Q ss_pred CcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHH
Q 008957 454 PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 501 (547)
Q Consensus 454 ~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 501 (547)
++.|+++.|+.+...++ |.+++|.+.|.+.|..|+|...+.+.+++.
T Consensus 364 ~~~~~~a~g~~~~~~~~-g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 364 LQARAIAIAVINATGNI-GSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hHHHHHHHHHHHHhhhh-hhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 89999999999988887 889999999999998888888877666543
No 4
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=298.74 Aligned_cols=378 Identities=37% Similarity=0.607 Sum_probs=300.9
Q ss_pred CCCCchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhh
Q 008957 59 SWFTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFA 138 (547)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g 138 (547)
.++..++.+.++++...+++.|+..+.. ..+.+++.||++++..|++.+.+.+.+.++++++|
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iag-----------------v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~g 89 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAG-----------------VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFG 89 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhh-----------------hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHH
Confidence 3445567889999999999999999875 33899999999999999999999999999999999
Q ss_pred hhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhh
Q 008957 139 SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTG 218 (547)
Q Consensus 139 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 218 (547)
+++|||.||+++.+|..+|.++.++++++..||+++++|.+.|+|.+...|+++.+++|.+|..+|++++++++.+.++|
T Consensus 90 yLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvG 169 (493)
T KOG1330|consen 90 YLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVG 169 (493)
T ss_pred HHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccccccccc
Q 008957 219 VALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 297 (547)
Q Consensus 219 ~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (547)
..+|.+.+..+.+..+ |||.|++.++++++++++.+++.+|+++...++.+.+.. .
T Consensus 170 sglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----------------------~ 226 (493)
T KOG1330|consen 170 SGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----------------------M 226 (493)
T ss_pred cceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc-----------------------C
Confidence 9999999999988766 999999999999999999999988755431111110000 0
Q ss_pred chhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccC----chhhHhhhhh
Q 008957 298 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM----SNADMMFGGV 373 (547)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~ 373 (547)
.....+.+++.+.+.+++.+....+.+....+....+..|.|.+....+.. +.....+..+
T Consensus 227 ---------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~v 291 (493)
T KOG1330|consen 227 ---------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGV 291 (493)
T ss_pred ---------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhH
Confidence 011223456777888888888888888888888888888888865543322 2344566778
Q ss_pred hcccccccceeeeeeeecccccchhH-----HHHHH-HHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhcCccce
Q 008957 374 TIVCGIVGTISGGFILDQMGATISNA-----FKLLS-AATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVN 445 (547)
Q Consensus 374 ~~~~~~~~~~~~g~l~d~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (547)
..+++.+|.+++|.++||+.++.++. ..+.. .+..+++....+... ..+.+..++++++.-......+++..
T Consensus 292 t~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~ 371 (493)
T KOG1330|consen 292 TCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNN 371 (493)
T ss_pred HHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccccccc
Confidence 88999999999999999976643331 11111 111222222222211 23445555555555555667777888
Q ss_pred eeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhH
Q 008957 446 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 491 (547)
Q Consensus 446 ~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 491 (547)
.+..+.+||+.|.++.++...+..++|.+-+|.+.|.+.|+.-+|+
T Consensus 372 ~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 372 PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 8899999999999999999999999999988989999999776565
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.2e-40 Score=328.71 Aligned_cols=398 Identities=15% Similarity=0.119 Sum_probs=287.9
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
.+.++..+++.++..+.|+.+++. +.|.+.+|+|++..+.|++.+++.+++.+++++.|+++|
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~-----------------~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D 89 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKA-----------------AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD 89 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhh-----------------hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 456778888999999999999986 449999999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhc-----cccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT 217 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 217 (547)
|+|||+++.+++++++++.++.++ ++|++.+++.|+++|++.+...|...++++||+|+++||++++++..+.++
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l 169 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL 169 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch
Confidence 999999999888888777766554 689999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHhhcCCC---CchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccc
Q 008957 218 GVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 294 (547)
Q Consensus 218 G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (547)
|.+++++++.++.... +||..|.+.++++++.+++.+++.++.+......++ ++. .+. .. .++ +
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~------~~~---~~~-~~-~~~-~- 236 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA------EEI---FGE-PI-SEE-D- 236 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh------hhc---ccC-cc-chh-h-
Confidence 9999999887766542 699999999988888777777766553321110000 000 000 00 000 0
Q ss_pred cccchhhhhcccccchhhhhhhhhhhhh-hHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhh
Q 008957 295 ISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGG 372 (547)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~ 372 (547)
.. .+.++ . +..+. .+..+++|.+|...+..++......++.+|.|.|+++.++.+.... ....
T Consensus 237 ----~~-~~~~~--~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~ 301 (467)
T PRK09556 237 ----KE-TESTD--M--------TKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFT 301 (467)
T ss_pred ----hc-ccccc--C--------cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 00 00000 0 00011 2336789999999888888888888889999999988888876443 4455
Q ss_pred hhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH-HH-HHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeec
Q 008957 373 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CL-TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLH 450 (547)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (547)
...++.+++.+++|+++||+++|+ .+.......... .+ .....++.+...+..++.+++.............+
T Consensus 302 ~~~~~~~ig~~~~G~lsDr~g~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 376 (467)
T PRK09556 302 LFEIGALVGSLLWGWLSDLANGRR-----ALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVG 376 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCc-----hHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 667889999999999999999883 332222111111 11 11122233333334444443332222222234557
Q ss_pred ccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc------------ccchhHHHHHHHHHHHHHHHHHHHHH
Q 008957 451 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFLAAGIWFVG 511 (547)
Q Consensus 451 ~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (547)
..|++.+|++.|+.+...++.|.+++|.+.|++.| ..+ |+..|.+..++.+++.+..+..
T Consensus 377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999999999988887576889999999999 444 8888888877777766655543
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=6.3e-38 Score=310.62 Aligned_cols=398 Identities=14% Similarity=0.168 Sum_probs=281.1
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 143 (547)
+.++..+++.++..++++..++. .+|.+.+++|++..+.|++.+.+.+++.+++++.|+++||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 84 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNA-----------------AMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR 84 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHH-----------------hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh
Confidence 35666677778888888777664 4489999999999999999999999999999999999999
Q ss_pred cCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhh
Q 008957 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (547)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (547)
+|||+++.++.++.+++.++.++++|++.+++.|++.|++.|...+...+++.|++|+++|++++++++.+.++|.++++
T Consensus 85 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 164 (434)
T PRK11663 85 SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP 164 (434)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhh
Q 008957 224 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 303 (547)
Q Consensus 224 ~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (547)
++++++.+.+|||+.|++.++++++..++.++..||.+.....++..++.. +..+...+.+
T Consensus 165 ~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------------~~~~~~~~~~- 225 (434)
T PRK11663 165 LVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH------------------DALELAQQQE- 225 (434)
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc------------------cccccchhcc-
Confidence 999999998999999999998877766666666666433211111100000 0000000000
Q ss_pred cccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccc
Q 008957 304 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGT 382 (547)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 382 (547)
.+. ...++.+. +..++++.++...+..++.......+..|+|.|+.+..+.+.... .......++++++.
T Consensus 226 ~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~ 296 (434)
T PRK11663 226 GAG-------LSRKEILT--KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA 296 (434)
T ss_pred ccC-------CChhhhHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 00000001 125678888888877777777777888899999977777775443 44566678899999
Q ss_pred eeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHH
Q 008957 383 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMA 462 (547)
Q Consensus 383 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g 462 (547)
++.|++.||+.++.+................++......+........+..+++.............+..+++.|+++.|
T Consensus 297 ~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 376 (434)
T PRK11663 297 LVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATG 376 (434)
T ss_pred HHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHH
Confidence 99999999984332111111111111111111111111222222222222222221111122234456677799999999
Q ss_pred HHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 463 ISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 463 ~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
+.+...++ |.+++|.+.|++.|..| |...|++.+++.+++.+..
T Consensus 377 ~~~~~~~~-g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 377 FVGLFAYL-GAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLL 420 (434)
T ss_pred HHHHHHHH-HHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 99988887 88999999999999876 8888888887776665544
No 7
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.4e-39 Score=327.45 Aligned_cols=427 Identities=14% Similarity=0.131 Sum_probs=297.4
Q ss_pred CCchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhh
Q 008957 61 FTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASL 140 (547)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 140 (547)
+..|.++++++++.+...++...++. .+|.+.++++++..+.+++.+++.++.+++++++|++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~-----------------ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~L 225 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGF-----------------VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGL 225 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777888888888887775 4488999999999999999999999999999999999
Q ss_pred hhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhh
Q 008957 141 AKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA 220 (547)
Q Consensus 141 ~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 220 (547)
+||+|||+++++++++.++++++++++++++.++++|++.|++.++..+...+++.|++|+++|++.++++.+++.+|.+
T Consensus 226 sDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i 305 (742)
T TIGR01299 226 ADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI 305 (742)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHhhcCC-------------CCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCc-cccccccccccCCcCCC
Q 008957 221 LGYVYGGVVGSH-------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES-GKAQVVASVSEGSEASN 286 (547)
Q Consensus 221 ~g~~l~~~l~~~-------------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 286 (547)
+++.++..+... .+||+.+++.++++++. ++.++++||++++.....+ ++......+....+...
T Consensus 306 la~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~ 384 (742)
T TIGR01299 306 YAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRA 384 (742)
T ss_pred HHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCC
Confidence 999887665432 36999999888776554 4455666887765322211 11110000000000000
Q ss_pred CCcccc----cccccchhhh-----hccccc-----chhhhhhhhhhhhhhHhhcccc---hhHHHHHHHHHHHHHHHHH
Q 008957 287 LNDHVS----EDISDQASER-----SIKSIG-----ESRFLNQLSQFSQDTKVLLQEK---VYVVNVLGYIAYNFVIGAY 349 (547)
Q Consensus 287 ~~~~~~----~~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 349 (547)
...... +.++.....+ +..... ...........|.+++.+|+.+ +.+.+.+.+++..+.++++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl 464 (742)
T TIGR01299 385 KGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGL 464 (742)
T ss_pred cCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0000000000 000000 0000011223344566666653 3445666678888889999
Q ss_pred hhhccceeEee-----------------------------------c------cC-------------------------
Q 008957 350 SYWGPKAGYNI-----------------------------------Y------HM------------------------- 363 (547)
Q Consensus 350 ~~~~p~~~~~~-----------------------------------~------~~------------------------- 363 (547)
..|+|.++.+. + +.
T Consensus 465 ~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (742)
T TIGR01299 465 SVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNT 544 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccch
Confidence 99999653220 0 00
Q ss_pred ---------------------------------------------c----hhhHhhhhhhcccccccceeeeeeeecccc
Q 008957 364 ---------------------------------------------S----NADMMFGGVTIVCGIVGTISGGFILDQMGA 394 (547)
Q Consensus 364 ---------------------------------------------~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 394 (547)
+ ........+..++.+++.+++|+++||+||
T Consensus 545 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GR 624 (742)
T TIGR01299 545 FFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGR 624 (742)
T ss_pred hhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 0 000122345568889999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCC
Q 008957 395 TISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 474 (547)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~ 474 (547)
| ++++.+.++.++++++.....+....+++.++.+++.+..++....++.+.+|++.|++++|+.+...++ |.+
T Consensus 625 r-----~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rl-Gai 698 (742)
T TIGR01299 625 L-----RMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKA-AAV 698 (742)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHH
Confidence 9 6777777776666666555555555555566666766777777888889999999999999999888887 999
Q ss_pred CccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008957 475 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 516 (547)
Q Consensus 475 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (547)
++|++.|.+.+.. ...++++.+++.++++++.+ ++|+
T Consensus 699 igp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~---~LPE 735 (742)
T TIGR01299 699 LGILIFGSFVGIT--KAAPILFASAALACGGLLAL---KLPD 735 (742)
T ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH---hCCC
Confidence 9999999887742 44677777666665555444 4455
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.5e-37 Score=302.85 Aligned_cols=346 Identities=16% Similarity=0.109 Sum_probs=265.7
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|.+.+|+|.|..+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++++++++++|++.++++|+++|++
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 110 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA 110 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+...+++.|++|+++|+++++++..+.++|.+++|++++.+.++.|||+.|++.++++++..+..++..|+.++
T Consensus 111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~- 189 (390)
T PRK03545 111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS- 189 (390)
T ss_pred HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC-
Confidence 9999999999999999999999999999999999999999999999998999999999999888776666665554211
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
+++.. .++.++.+++|.++......++..
T Consensus 190 -----~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 218 (390)
T PRK03545 190 -----EHSGS----------------------------------------------LKSLPLLFRRPALVSLYLLTVVVV 218 (390)
T ss_pred -----CCcch----------------------------------------------HHHHHHHHhCcHHHHHHHHHHHHH
Confidence 00000 022346778888776655555555
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (547)
........+.|.++++..+.+.... .+.....++++++.++.+++.||+++| .......+.......+....++
T Consensus 219 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~ 293 (390)
T PRK03545 219 TAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANS 293 (390)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhch
Confidence 5555555667777777666665433 444556678899999999999999876 4443333333333333333344
Q ss_pred HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHH
Q 008957 423 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 502 (547)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 502 (547)
.+...+...+.+++.....+.......+. .|+.|+++.|+.+...+. |..+||.+.|++.|+.| ++..+.+.+.+.+
T Consensus 294 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~ 370 (390)
T PRK03545 294 EWHLSVLSIFWGIAIMCIGLAMQVKVLKL-APDATDVAMALFSGIFNI-GIGAGALLGNQVSLHLG-LSSIGYVGAALAL 370 (390)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHh-CCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhHHHHHHHHHHH
Confidence 45555555555555544434444444454 457889999999877777 88889999999999876 7788887777766
Q ss_pred HHHHHHH
Q 008957 503 LAAGIWF 509 (547)
Q Consensus 503 ~~~~~~~ 509 (547)
++.+...
T Consensus 371 ~~~~~~~ 377 (390)
T PRK03545 371 AALVWSI 377 (390)
T ss_pred HHHHHHH
Confidence 6555544
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.9e-37 Score=297.78 Aligned_cols=352 Identities=13% Similarity=0.044 Sum_probs=257.9
Q ss_pred ccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHh
Q 008957 101 ICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 180 (547)
Q Consensus 101 ~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 180 (547)
|.|.+|.+++|+|+|..+.|++.+++.+++.+++++.|+++||+|||++++.+.+....+.+....++|++.++++|+++
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 89 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLA 89 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 44677999999999999999999999999999999999999999999877665555545443333447999999999999
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
|++.+. .+.....++|++|+++|++++++.+.+.++|.++++++++++.+++|||+.|++.++++++..++.++..||.
T Consensus 90 G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 90 ALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999986 4556666799999999999999999999999999999999999999999999999999888888888777874
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
++... + .. + . . +..+++++++++|.+|...+..+
T Consensus 169 p~~~~--~---~~-------------------~-----~--------------~---~~~~~~~~ll~~~~~~~~~~~~~ 202 (368)
T TIGR00903 169 PFQAA--E---GF-------------------G-----F--------------K---DAVKEFGALAGRKDLWIIGAILG 202 (368)
T ss_pred CCCCC--C---Cc-------------------c-----h--------------H---HHHHHHHHHHcChhHHHHHHHHH
Confidence 32210 0 00 0 0 0 00123567889999999999999
Q ss_pred HHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 008957 341 AYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (547)
+.....+++.+|+|.|+++. +.+........+..+.+.++ .+++.||..||..++ ........+..+.+......
T Consensus 203 ~~~~~~~~~~~wlp~~L~~~-g~s~~~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~~~~~~~ 277 (368)
T TIGR00903 203 FGVALFDNLAIWLEAALRPA-GLEDIAGDAVALAILAGLIG---VAVIPDRVARAGLRS-IYIRAAALLIAAFFLALAFE 277 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCChHHHHHHHHHHHHHHHH---HHHhhHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999764 45543333334444444444 478889887653221 22221222222222222222
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
.+....+++.++.+++....++..+.+..|.+|++.|+++.|+.+...+. |++++|.+.+.+.. + ....|.+++..
T Consensus 278 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~~~f~~~~~~ 353 (368)
T TIGR00903 278 LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AEAYFTFLAIL 353 (368)
T ss_pred cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HHHHHHHHHHH
Confidence 33333444555555555556666777788999999999999999988888 77778888887774 3 44667777766
Q ss_pred HHHHHHHH
Q 008957 501 FFLAAGIW 508 (547)
Q Consensus 501 ~~~~~~~~ 508 (547)
.+++.+..
T Consensus 354 ~~i~~~~~ 361 (368)
T TIGR00903 354 ITIAFAIA 361 (368)
T ss_pred HHHHHHHH
Confidence 66655554
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=8.4e-37 Score=304.99 Aligned_cols=362 Identities=12% Similarity=0.008 Sum_probs=250.4
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.++++|++.|++
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc----C-----CCCchhHHHHHHHHHHHHHHHHH
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~----~-----~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
.+... ....+++|++|+++||+++++.....++|..+++.+.+.+. + ..|||+.|++.++++++..++.+
T Consensus 138 ~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 138 LATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 88654 45668899999999999999998877777777766554432 1 25899999999999888777776
Q ss_pred hhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHH
Q 008957 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (547)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (547)
++.++.+.. . ..+.++ + .. .++ ++....+++.++++++|.
T Consensus 217 ~~~~~~p~~------~--~~~~~~--------------~----~~----~~~----------~~~~~~~~~~~~~~~~~~ 256 (476)
T PLN00028 217 TLGQDLPDG------N--YRELKK--------------S----GT----MPK----------DSFSKVLRYGVTNYRTWI 256 (476)
T ss_pred HHcCcCCCC------c--hhhHHh--------------c----Cc----ccc----------ccHHHHHHHHHcCchhHH
Confidence 654432111 0 000000 0 00 000 001123456678888887
Q ss_pred HHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhH--HHHHHHHHHHHH
Q 008957 335 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA--FKLLSAATFLGA 411 (547)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~ 411 (547)
..+..++.......+..+.|.|+.+..+.+.... .+..+..++++++++++|+++||++||...+ +........+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~ 336 (476)
T PLN00028 257 LALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG 336 (476)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 7776666666666677788888877777775443 5556777899999999999999999874321 122222223232
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc--cch
Q 008957 412 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--VNN 489 (547)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--~~~ 489 (547)
+.+++....++.+..++.+++.+++.....+....+.. ++.++.+|++.|+.+... .+|+.+.+++.+. .++
T Consensus 337 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~g-----~lg~~i~~~l~~~~~~~~ 410 (476)
T PLN00028 337 VFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVP-FVSRRSLGVISGLTGAGG-----NVGAVLTQLLFFTGSSYS 410 (476)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCc-ccChhhchhhhhhhhccc-----cHHHHHHHHHHHhcCCcc
Confidence 22233233333333344444444444444444444433 356678999888875433 3355555555542 346
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 008957 490 WRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
|..+|++.+++.+++.++.+..+
T Consensus 411 y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 411 TETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HhhHHHHHHHHHHHHHHHHHhee
Confidence 88899998888887777666544
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1e-36 Score=300.89 Aligned_cols=380 Identities=17% Similarity=0.166 Sum_probs=280.7
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 141 (547)
+.|..+.+++...+.+++|....+. ..|.+.+++|.++.+.+++.+.+.++..+++++.|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 74 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGV-----------------AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLA 74 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777778888888998888875 34899999999999999999999999999999999999
Q ss_pred hhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
||+|||+++..+.++..++.+++++++|++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 75 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 154 (406)
T PRK11551 75 DRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL 154 (406)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhh
Q 008957 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (547)
Q Consensus 222 g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (547)
++.+++.+.+..+||+.|++.++..++..++..++.||+++...++++++ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~---------------------------- 205 (406)
T PRK11551 155 ASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK-Q---------------------------- 205 (406)
T ss_pred HHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch-h----------------------------
Confidence 99999999888999999999888777666666666676432210000000 0
Q ss_pred hhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-Hhhhhhhcccccc
Q 008957 302 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIV 380 (547)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 380 (547)
++ ... .......+.+..+...+..++.....+....|.|.++++. +.+... ........++.++
T Consensus 206 ---~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-g~s~~~~~~~~~~~~~~~~~ 270 (406)
T PRK11551 206 ---RA-------PVL----RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQ-GLSRSQAGLVQIAFNIGGAL 270 (406)
T ss_pred ---hh-------hhH----HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhhhhHHHHHHHHHHHH
Confidence 00 000 0000000112223333334444455566677888888764 554333 3445566788899
Q ss_pred cceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHH
Q 008957 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 460 (547)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 460 (547)
+.++.|++.||+++| +.+..........++.....++.+...+..++.+++.....+.......+.+|++.|+++
T Consensus 271 ~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 345 (406)
T PRK11551 271 GSLLIGALMDRLRPR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTG 345 (406)
T ss_pred HHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhh
Confidence 999999999999988 455444333333333333344444444555555555555666667778888899999999
Q ss_pred HHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 461 MAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 461 ~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
.|+.+...+. |..++|.+.|.+.++.+++...+.....+.+++.++.
T Consensus 346 ~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 346 VGAAVAVGRL-GSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred hhHHHHhhhH-HHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999888777 8889999999999986666555555555544444433
No 12
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.1e-36 Score=299.37 Aligned_cols=401 Identities=14% Similarity=0.069 Sum_probs=282.1
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
.|.++..+++.....+.+...++. .+|.+.+++|++.++.+++.+.+.++..++.+++|+++|
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~d 79 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTV-----------------FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVN 79 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhh-----------------hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 355666666666666666554554 348899999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhccccHHHHHH-HHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
|+|||++++.+.++.++++++++++++++.+++ .|++.|++.+...+....++.++++ ++|++++++.+.+..+|..+
T Consensus 80 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~ 158 (455)
T TIGR00892 80 RFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLST 158 (455)
T ss_pred HcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHH
Confidence 999999999999999999999999999998875 5799999999877777888899996 67999999999999999999
Q ss_pred hhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhh
Q 008957 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (547)
Q Consensus 222 g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (547)
+|++++.+.+.+|||+.|++.+++.++..+..+++.|+.......+++.+ +. .+.... . ++.+
T Consensus 159 ~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~-~---~~~~----- 221 (455)
T TIGR00892 159 LAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-----EG---LPPDGS-T---KKLS----- 221 (455)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-----cc---CCCCCc-c---cccc-----
Confidence 99999999988999999999999887766655555443111000000000 00 000000 0 0000
Q ss_pred hhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccc
Q 008957 302 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIV 380 (547)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 380 (547)
.... . +..++ ..++ .++++|.++...+..++..........++|.|.++ .+.+.... .+..+.+++.++
T Consensus 222 -~~~~--~----~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~ 291 (455)
T TIGR00892 222 -KKST--A----EKINR-FLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIF 291 (455)
T ss_pred -ccch--h----hhhhh-hcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 0000 0 00000 1112 46688888888777777777777777788888876 45554333 445566788888
Q ss_pred cceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHH
Q 008957 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 460 (547)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 460 (547)
+.++++++.||...+..+ ...+..+.++.....++....++.+..++..++.+++.+...+.....+.+.+|++.++++
T Consensus 292 ~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~ 370 (455)
T TIGR00892 292 ARPSCGLIAGLKWIRPHV-QYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSA 370 (455)
T ss_pred HHHHHHHHhcccccCHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhH
Confidence 888999999974322111 0222222222222222333345555556666667776666667777788888899999999
Q ss_pred HHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 461 MAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 461 ~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
.|+.+...+. |.++||.+.|.+.|..++|+..|++.+++.+++.+...+
T Consensus 371 ~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 371 VGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAI 419 (455)
T ss_pred HhHHHHHHHH-HHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHH
Confidence 9999888777 989999999999998877888888888776665554443
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.4e-36 Score=301.06 Aligned_cols=372 Identities=14% Similarity=0.075 Sum_probs=249.8
Q ss_pred hHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccc---cCccchhHHHHHHH---HHHhhhhhhhh
Q 008957 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFK---LNNFQDGVLSSAFM---VGLLVASPIFA 138 (547)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~---~s~~~~g~~~s~~~---~~~~~~~~~~g 138 (547)
+.+...+++++++++|+.+++.. .|.+.++++ .+..+.+.+.+.+. ++..++++++|
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G 84 (432)
T PRK10406 22 WAIVGASSGNLVEWFDFYVYSFC-----------------SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFG 84 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666678899999999998863 388899985 45555445444444 44559999999
Q ss_pred hhhhhcCCceehHHHHHHHHHHHHhhhccccHH--------HHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhH
Q 008957 139 SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 210 (547)
Q Consensus 139 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 210 (547)
+++||+|||+++.+++++++++++++++++++. .++++|+++|++.|..++...++++|++|+++|+++.++
T Consensus 85 ~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~ 164 (432)
T PRK10406 85 RIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASF 164 (432)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHH
Confidence 999999999999999999999999999999874 588999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHHhhc--------CCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCC
Q 008957 211 FYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 282 (547)
Q Consensus 211 ~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 282 (547)
.+.+...|.++++++...+. ..+|||++|++.++++++... .....||+++. + .+ .
T Consensus 165 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~----~-~~-~--------- 228 (432)
T PRK10406 165 QYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ----E-TR-A--------- 228 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH----H-Hh-h---------
Confidence 99988888888887665543 257999999998877655432 22223432110 0 00 0
Q ss_pred cCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHH-HHHHHHHhhhccceeEeec
Q 008957 283 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY-NFVIGAYSYWGPKAGYNIY 361 (547)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~ 361 (547)
..+ ..+++++++++..+...+...+. ...++.+..|+|.|+++..
T Consensus 229 --------------------~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~ 274 (432)
T PRK10406 229 --------------------LKE--------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTA 274 (432)
T ss_pred --------------------hcc--------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000 01245566777777655554443 5667778889999988776
Q ss_pred cCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH-HHH-H--hhhHHHHHHHHHHHHHH
Q 008957 362 HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-C--LSSLYGFLALFTVGELL 436 (547)
Q Consensus 362 ~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~ 436 (547)
+.+.... ....+..++..++.++.|+++||++|| +.+.....+..+... ... . .++....+.+..+..++
T Consensus 275 g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 275 GMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLI 349 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 7765333 334445556677778889999999998 444333332222211 111 1 11222222222222222
Q ss_pred HhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 437 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
.+...+....+..|.+|++.|+++.|+.+...+.+.+...|.+.+.+ +..|.+...+++.+++.+++.+..+
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 22233334555678888999999999998777654334477777755 5556565555555555555444433
No 14
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.8e-36 Score=304.54 Aligned_cols=384 Identities=11% Similarity=0.034 Sum_probs=254.5
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccc-hhHH-----HHHHHHHHhhhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQ-DGVL-----SSAFMVGLLVASPIF 137 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~-~g~~-----~s~~~~~~~~~~~~~ 137 (547)
++.+...+++++++++|...+++ ..|.+.++|+.+.++ .+++ .++..+++.++++++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~ 77 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGF-----------------VAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFF 77 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677778899999999999876 338888888754433 2332 577889999999999
Q ss_pred hhhhhhcCCceehHHHHHHHHHHHHhhhccccHHH--------HHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhh
Q 008957 138 ASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 209 (547)
Q Consensus 138 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 209 (547)
|+++||+|||+++.+++++++++++++++++|+++ ++++|+++|++.|..++...++++|++|+++||++.+
T Consensus 78 G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~ 157 (490)
T PRK10642 78 GMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGS 157 (490)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999999999875 8899999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhhHHhhc--------CCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccC
Q 008957 210 MFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 281 (547)
Q Consensus 210 ~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 281 (547)
+...+..+|..+|+.++..+. ..+|||+.|++.++++++ .++.....||+++.....++.+. .
T Consensus 158 ~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~----~---- 228 (490)
T PRK10642 158 WLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQ----G---- 228 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhh----h----
Confidence 999988888888886654432 357999999997765554 33333445664332100000000 0
Q ss_pred CcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhccc-ch-hHHHHHHHHHHHHHHHHHhhhccceeEe
Q 008957 282 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE-KV-YVVNVLGYIAYNFVIGAYSYWGPKAGYN 359 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 359 (547)
. .+... +.+. .++++++++ +. +.......++....++.+..|+|.|+++
T Consensus 229 ----~-----~~~~~------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 279 (490)
T PRK10642 229 ----D-----REGLQ------DGPK--------------VSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH 279 (490)
T ss_pred ----c-----ccccc------cccc--------------CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000 0000 112233321 22 2222223344556677788899999977
Q ss_pred eccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH-HH--HHHHhhhHHHHHHHHHHHHH
Q 008957 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CL--TAFCLSSLYGFLALFTVGEL 435 (547)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 435 (547)
..+.+.... .......++.+++.++.|+++||+||| +.+..+.+...+. .. .....++.....+..++.++
T Consensus 280 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 354 (490)
T PRK10642 280 NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAV 354 (490)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 666664333 334455677888889999999999998 5544443322221 11 11112223333333344444
Q ss_pred HHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 436 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
+.+...+.......+.+|++.|+++.|+.+..... ++.++|.+.+++.+..+++..++++..+..+++.+..
T Consensus 355 ~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 355 ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 44444444455566778899999999986666666 4467899999998866555555554444444444433
No 15
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=4.4e-36 Score=301.09 Aligned_cols=415 Identities=13% Similarity=0.126 Sum_probs=289.4
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCC-----CccccccccccccccCccchhHHHHHHHHHHhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDK-----GICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPI 136 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 136 (547)
.++.+..++++++.+++.|+.+++.+........+++. ...|.......|++++..+.|++.+++.+++.+++++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 95 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIP 95 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcc
Confidence 34567777888888999999999986542221110000 0001111222389999999999999999999999999
Q ss_pred hhhhhhhcCCceehHHHHHHHHHHHHhhhcc--ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHh
Q 008957 137 FASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 214 (547)
Q Consensus 137 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 214 (547)
.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.||+|+++|++++++...+
T Consensus 96 ~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 96 VGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred hHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887544 56888999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhHHhhcCC-CCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccccc
Q 008957 215 IPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSE 293 (547)
Q Consensus 215 ~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (547)
..+|.++++++++.+.+. .|||+.|++.++++++..++++++.++.++..+..++. ++ +
T Consensus 176 ~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~------~~--------------~ 235 (465)
T TIGR00894 176 FQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKF------EK--------------K 235 (465)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHH------HH--------------H
Confidence 999999999999999988 49999999999998888777777766543221100000 00 0
Q ss_pred ccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhh
Q 008957 294 DISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGG 372 (547)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~ 372 (547)
..++..+.+..+. +....++++++++.++...+..++.....+.+.+|+|.|+++..+.+.... ....
T Consensus 236 ~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~ 304 (465)
T TIGR00894 236 YINSSLQGQKGST-----------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSS 304 (465)
T ss_pred HHHhhcccccCCC-----------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHH
Confidence 0000000000000 001236678899999999999999999999999999999988877775443 4556
Q ss_pred hhcccccccceeeeeeeecccccchhHHH----HHHHHHHHHHHH-HHHHHH-hhhHHHHHHHHHHHHHHHhhcCcccee
Q 008957 373 VTIVCGIVGTISGGFILDQMGATISNAFK----LLSAATFLGAIS-CLTAFC-LSSLYGFLALFTVGELLVFATQAPVNY 446 (547)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (547)
++.++.+++.+++|+++||+++|+...+. ............ .+.... ..+....++++++.+++.+...+....
T Consensus 305 ~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 384 (465)
T TIGR00894 305 LPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLI 384 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhh
Confidence 77888999999999999998765322211 111111111111 111111 123333334444444444333333333
Q ss_pred eeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc--chhHHHHHHHHHHHHHHHHHHH
Q 008957 447 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 447 ~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
. ..+..++.+|.+.|+.+....+ |.+++|.+.|++.+.. +.|...|.+.+++.+++.++..
T Consensus 385 ~-~~~~~~~~~g~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 385 N-SLDLAPRFLGFIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred c-hhhcChhHHHHHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 3 3345567999999999888887 8788999999988753 4577788877777666555443
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.3e-36 Score=297.10 Aligned_cols=377 Identities=18% Similarity=0.205 Sum_probs=277.4
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
..|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++.++++|++.++++|++.|++
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 95 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAA 95 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 44889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+..+||+.|++.+++.++..++.++..|++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (399)
T TIGR00893 96 EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQK 175 (399)
T ss_pred HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCc
Confidence 99999999999999999999999999999999999999999999999889999999999988887777776666654322
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
....+++ ++....+... + +.+.++ ..+......++.+++|.++...+..++..
T Consensus 176 ~~~~~~~------~~~~~~~~~~------~----~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
T TIGR00893 176 AKWLTEE------EKYIVVGGLL------A----EQQGKG-----------PSTPKKYQIKELLKDRRVWGLALGQFLVN 228 (399)
T ss_pred cccCCHH------HHhhcchhhc------c----cccccc-----------ccCCCccchHHHhcCHHHHHHHHHHHHHH
Confidence 1110000 0000000000 0 000000 00011134566778899998888888888
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH---
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--- 419 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 419 (547)
.....+..+.|.|+++..+.+.... .......++++++.++.+++.||+++|+..................+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T TIGR00893 229 IGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY 308 (399)
T ss_pred hHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 8888889999999988777765443 445566788899999999999999998421101111111111111111111
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHH
Q 008957 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 499 (547)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 499 (547)
.++.+.......+. .+.....+....+..+..|++.|+++.|+.+...+. |..++|.+.|++.|..|+|...+.+.++
T Consensus 309 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~g~~~~~~~~~~~ 386 (399)
T TIGR00893 309 VNIPYAALALVALG-FFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATTGSFAGALMVVAA 386 (399)
T ss_pred chhHHHHHHHHHHH-HhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCCCchhHHHHHHHH
Confidence 12233333233333 233335667777888889999999999999888877 8899999999999987768788887777
Q ss_pred HHHHHHHHHH
Q 008957 500 IFFLAAGIWF 509 (547)
Q Consensus 500 ~~~~~~~~~~ 509 (547)
+.+++.+..+
T Consensus 387 ~~~~~~~~~~ 396 (399)
T TIGR00893 387 LALIGALSYL 396 (399)
T ss_pred HHHHHHHHHH
Confidence 7666555443
No 17
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.1e-35 Score=296.17 Aligned_cols=400 Identities=13% Similarity=0.072 Sum_probs=271.7
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 143 (547)
|.++..+++.+...+.++..++. .+|.+.++ |++..+.+++.+.+.+++.++++++|+++||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr 89 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFAL-----------------AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR 89 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 45566666777777777776664 33888888 9999999999999999999999999999999
Q ss_pred cCCceehHHHHHHHHHHHHhhhcc----ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhh
Q 008957 144 HNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV 219 (547)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 219 (547)
+|||++++++.++.+++.++++++ ++++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|.
T Consensus 90 ~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 90 SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999988875 3788899999999999998888888889999999999999999999999986
Q ss_pred h-hhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccc
Q 008957 220 A-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (547)
Q Consensus 220 ~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (547)
. .+++++..+....|||+.|++.++++++..++.+++.||+++....+++++.. .+ .. +..++
T Consensus 170 ~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~---~~------~~~~~- 233 (452)
T PRK11273 170 GLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK------ND---YP------DDYNE- 233 (452)
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh------hc---cc------ccccc-
Confidence 4 45555434433458999999999888887777777777644321111100000 00 00 00000
Q ss_pred hhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhccc
Q 008957 299 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVC 377 (547)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~ 377 (547)
++.++ ...++. -.+.+++++.+|...+..++.....+.+..|.|.|+++..+.+.... ....+..++
T Consensus 234 ---~~~~~-------~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~ 301 (452)
T PRK11273 234 ---KHEQE-------LTAKQI--FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYA 301 (452)
T ss_pred ---ccCCC-------ccHHHH--HHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 00000 000000 01246788999988888888887788888999999998777664333 344566678
Q ss_pred ccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCc
Q 008957 378 GIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 455 (547)
Q Consensus 378 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (547)
.+++.++.|+++||+++++.. ........+..+..+.... ..+.+...+..++.+.+.............+..|++
T Consensus 302 ~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 379 (452)
T PRK11273 302 GIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK 379 (452)
T ss_pred HHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence 888999999999999542111 1111111111111111111 112222223333333322222222223456778889
Q ss_pred chhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 008957 456 LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 456 ~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
.||++.|+.+...+..+..++|.+.|++.|+.| |+..|.+.+++.+++++......
T Consensus 380 ~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 380 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887777334457999999999887 88888888877777666655444
No 18
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.8e-35 Score=289.17 Aligned_cols=346 Identities=12% Similarity=-0.029 Sum_probs=259.0
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
|.+|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++|++.++++|+++|+
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gi 109 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGV 109 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHh
Confidence 35699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC-CchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
+.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +||+.+.+.++..++..+..++..++.+
T Consensus 110 g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (393)
T PRK09705 110 GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREV 188 (393)
T ss_pred HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999997 67999999999999999999999999988775 8999988777665543332222211110
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (547)
+ ++++.. ...++.++++..+...+..++
T Consensus 189 ~-----~~~~~~-----------------------------------------------~~~~~~l~~~~~~~l~~~~~~ 216 (393)
T PRK09705 189 A-----SSHKTT-----------------------------------------------TTPVRVVFTPRAWTLGVYFGL 216 (393)
T ss_pred c-----cccCCC-----------------------------------------------cCCcccccCHhHHHHHHHHHH
Confidence 0 000000 001223456667766666666
Q ss_pred HHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 008957 342 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (547)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (547)
....+.....|.|.++++ .+.+.... ....+..++.+++.++.+++.||+++| +.+..+..+.....++....
T Consensus 217 ~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 217 INGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHHHHHc
Confidence 777777888899999887 56665433 455677789999999999999999988 45544444443333332222
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccceeeeecccC-CcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHH
Q 008957 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 499 (547)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 499 (547)
+..... ...++.+++.+...+.......+..+ ++.+++..|+.+...+. +..++|.+.|++.|..|+|...+++.++
T Consensus 291 ~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~~~~~~~~ 368 (393)
T PRK09705 291 PLQLPV-LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYLMDWAFHAL 368 (393)
T ss_pred cchHHH-HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 221111 12233455555555555445556665 47899999999888877 7788999999999999888888888777
Q ss_pred HHHHHHHHHH
Q 008957 500 IFFLAAGIWF 509 (547)
Q Consensus 500 ~~~~~~~~~~ 509 (547)
+.++..++..
T Consensus 369 ~~~~~~~~~~ 378 (393)
T PRK09705 369 CVVGLMIITL 378 (393)
T ss_pred HHHHHHHHHH
Confidence 7665544443
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.4e-35 Score=298.31 Aligned_cols=388 Identities=13% Similarity=0.082 Sum_probs=287.0
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
.|..+..+++..++..+|.++++. ++|.+.+|+|.+.++.+|+.+.|.+++.++.+++|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~-----------------a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D 66 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHV-----------------AAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD 66 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788889999999999999987 459999999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccC-CCCCcchhhhHHHHhhhhhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
|+|||++++++.+++.++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+
T Consensus 67 ~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 67 RIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988888887776 6789999999999999999999
Q ss_pred hhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhh
Q 008957 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (547)
Q Consensus 222 g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (547)
||++++++.++.||||.|++...++++..++.+++.|+.+... .++.+........... ......++..
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~------~~l~~~~~~~--- 215 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAI------LLLVYSAKTA--- 215 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHH------HHHHHHHHhc---
Confidence 9999999999999999999998888877777777777633211 0000000000000000 0000000000
Q ss_pred hhcccccch----------------hhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCch
Q 008957 302 RSIKSIGES----------------RFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 365 (547)
Q Consensus 302 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 365 (547)
.......+. ....+.++...+ .++++++.+....+..++......+..++.|.|++...+.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~ 294 (495)
T PRK14995 216 LKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSP 294 (495)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 000000000 000000011111 357888888888887777777788888899999998888886
Q ss_pred hhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhcC
Q 008957 366 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQ 441 (547)
Q Consensus 366 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 441 (547)
... .......++..++.++.|++.||+++| +.+..+..+..+..++.... .+.+......++.+++.+...
T Consensus 295 ~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~ 369 (495)
T PRK14995 295 LEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASAL 369 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHH
Confidence 555 444555678888999999999999987 55554444444333322221 234444556677777777777
Q ss_pred ccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc
Q 008957 442 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 485 (547)
Q Consensus 442 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 485 (547)
++......+.+|++.++.+.++.+...++ |..+|+.+.|.+.+
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-G~~~G~ai~g~i~~ 412 (495)
T PRK14995 370 LASTSAIMAAAPPEKAAAAGAIETMAYEL-GAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHhcCCHHhcchHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 77777788888999999999999888887 88889988888876
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.3e-35 Score=288.90 Aligned_cols=347 Identities=12% Similarity=0.032 Sum_probs=260.2
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|.+.+++|++..+.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++++++|++.++++|++.|++
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 104 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAG 104 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 44999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..|||+.|++.++++++..+..+++.+++++.
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 183 (377)
T TIGR00890 105 VGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQ 183 (377)
T ss_pred HHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchh
Confidence 99888888888999987 46999999999999999988777777777778999999999999888877777766542211
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
..++ ++. .+ .+ ..+.++.++++.++...+..++..
T Consensus 184 ~~~~--~~~----------------------~~-------~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 184 LIKT--NIE----------------------VS-------VK--------------DYTVWEMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred cccc--Ccc----------------------cc-------hh--------------hhhHHHHHcCccHHHHHHHHHHHh
Confidence 0000 000 00 00 012345667788777766666555
Q ss_pred HHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (547)
........+.+.|.++ .+.+... .....+..++.+++.++.|++.||++|| +.+..+..+.....++....++
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAAMLFIPM 292 (377)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHccc
Confidence 5554555555556544 3444332 3455667788899999999999999998 5555555544444444333332
Q ss_pred --HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 423 --LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 423 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
........++.+++.+...+.......+.+|+++|+++.|+.+...++ |..++|.+.|.+.+..| |+..+.+.+++
T Consensus 293 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~f~~~~~~ 370 (377)
T TIGR00890 293 LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYTFIVTGAF 370 (377)
T ss_pred chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhHHHHHHHH
Confidence 222223334445555555555566677888889999999999888777 88999999999998865 77888777766
Q ss_pred HHHH
Q 008957 501 FFLA 504 (547)
Q Consensus 501 ~~~~ 504 (547)
.+++
T Consensus 371 ~~~~ 374 (377)
T TIGR00890 371 ALTS 374 (377)
T ss_pred HHHh
Confidence 5543
No 21
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.6e-34 Score=281.93 Aligned_cols=347 Identities=15% Similarity=0.155 Sum_probs=252.9
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|.+++|+|.+..+.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.|++
T Consensus 25 ~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~ 104 (382)
T PRK10091 25 VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFP 104 (382)
T ss_pred ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+....++.|++++++|++++++...+..+|..+++++++++.+..+||+.|++.+++.++..+..++..||.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~- 183 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD- 183 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc-
Confidence 9998888889999999999999999999999999999999999999998999999999998887777666666666321
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
+.+.. . + +. .+.++++..+......++..
T Consensus 184 -----~~~~~----------------------------------------~--~---~~-~~~~~~~~~~~~~~~~~~~~ 212 (382)
T PRK10091 184 -----EAKGG----------------------------------------L--R---EQ-FHFLRSPAPWLIFAATMFGN 212 (382)
T ss_pred -----ccccC----------------------------------------H--H---HH-HHHhcChHHHHHHHHHHHHH
Confidence 00000 0 0 01 12345666665554444444
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH-Hhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CLS 421 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 421 (547)
........+.+.++.+..+.++... .+..+..++.+++.++.+++.||+++| +.+.....+..+..++.. ..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~~~~~ 287 (382)
T PRK10091 213 AGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLFFFGG 287 (382)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444555666666566665443 445677788999999999999999988 455544444444333332 233
Q ss_pred hHHHHHHHHHHHHHHHhhcCccceeeeeccc-CCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
+.+...+..++.+.+.....++......+.. +++.++.+. .+...+. |.++||.+.|++.|..++|+..+.+.+++
T Consensus 288 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~ 364 (382)
T PRK10091 288 MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGMMLTLGLAYNYVALPAALL 364 (382)
T ss_pred hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence 3333334444444443333333332333333 345555543 3445555 88999999999999777788888887776
Q ss_pred HHHHHHHHHH
Q 008957 501 FFLAAGIWFV 510 (547)
Q Consensus 501 ~~~~~~~~~~ 510 (547)
.++.......
T Consensus 365 ~~~~~~~~~~ 374 (382)
T PRK10091 365 SFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHH
Confidence 6665555443
No 22
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.9e-34 Score=281.47 Aligned_cols=338 Identities=14% Similarity=0.097 Sum_probs=252.5
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|.+.+++|+++++.|+..+++.++..+++++.|+++||+|||++++.+.++.+++.+++++++|++.+++.|+++|++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 121 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLA 121 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHh
Confidence 34889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+...+++.|++|+++|++++++...+.++|.++||++++++.+++|||+.|++.++++++..+......||.++
T Consensus 122 ~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~- 200 (394)
T PRK10213 122 LGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG- 200 (394)
T ss_pred hHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc-
Confidence 9999999999999999999999999999999999999999999999999999999999987776655544444454210
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
++++ . .+..+..+++|.++...+..++..
T Consensus 201 ----~~~~-~----------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~ 229 (394)
T PRK10213 201 ----EPSH-Q----------------------------------------------KQNTFRLLQRPGVMAGMIAIFMSF 229 (394)
T ss_pred ----cccc-c----------------------------------------------hhHHHHHhcCHHHHHHHHHHHHHH
Confidence 0000 0 011345677888887766655555
Q ss_pred HHHHHHhhhc-cceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 008957 344 FVIGAYSYWG-PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 421 (547)
Q Consensus 344 ~~~~~~~~~~-p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (547)
........+. |.|.+ ..+.+.... .......++++++.++.+++.||.+++ ..+..........+++....+
T Consensus 230 ~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~ 303 (394)
T PRK10213 230 AGQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGS 303 (394)
T ss_pred HHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhh
Confidence 5555555555 55554 456665443 444556678888888889988885433 333333332333333333444
Q ss_pred hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHH
Q 008957 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 501 (547)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 501 (547)
+.+......++.+++.+...+.....+.+..| +.++++.+......+. |..+||.+.|++.|..| +...+...+++.
T Consensus 304 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-g~~~G~~l~G~l~~~~g-~~~~~~~~~~~~ 380 (394)
T PRK10213 304 DKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQL-ANTCGAAIGGYALDNIG-LTSPLMLSGTLM 380 (394)
T ss_pred hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhhHHHHHHHHH
Confidence 55555556666777776666666666777665 4566777766555665 88899999999999876 545555555443
Q ss_pred H
Q 008957 502 F 502 (547)
Q Consensus 502 ~ 502 (547)
+
T Consensus 381 ~ 381 (394)
T PRK10213 381 L 381 (394)
T ss_pred H
Confidence 3
No 23
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2.5e-34 Score=276.90 Aligned_cols=371 Identities=13% Similarity=0.029 Sum_probs=278.3
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCcccccccccc-ccccCccchhHHHHHHHHHHhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQG-DFKLNNFQDGVLSSAFMVGLLVASPIFASL 140 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 140 (547)
..|+.+.+..+.+.+.+.....++. ..+.+.+ |+|+|.+|.+++.+++.+++.++.++.|++
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~-----------------l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l 93 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSA-----------------VTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFM 93 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777788888888888888775 3366665 899999999999999999999999999999
Q ss_pred hhhcCCceehHHHHHHHHHHHHhhhcc-----ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhh
Q 008957 141 AKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCI 215 (547)
Q Consensus 141 ~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 215 (547)
.||+|.|+++.++.++.++.+++.+++ +|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....
T Consensus 94 ~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G 172 (462)
T PRK15034 94 VPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLG 172 (462)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHH
Confidence 999999999999999999999999987 8999999999999998 6688999999999999999999999998777
Q ss_pred hhhhhhhhhhHHhhc------------------CCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccc
Q 008957 216 PTGVALGYVYGGVVG------------------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 277 (547)
Q Consensus 216 ~~G~~~g~~l~~~l~------------------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 277 (547)
++|..+++++...+. +..+||..+++..++.++..++.+++.++.+. ++..
T Consensus 173 ~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~------~~~~----- 241 (462)
T PRK15034 173 NLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS------SRAS----- 241 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc------cccC-----
Confidence 777776666554322 13458888888888888777777776544211 0000
Q ss_pred cccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhcccee
Q 008957 278 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG 357 (547)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 357 (547)
.++.+..+|+|..|...+.+++.+..+.++.+++|.|.
T Consensus 242 ------------------------------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~ 279 (462)
T PRK15034 242 ------------------------------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLA 279 (462)
T ss_pred ------------------------------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13456788999999999999999999999999999998
Q ss_pred EeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHH-HHHh-----hhHHHHHHHHH
Q 008957 358 YNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-AFCL-----SSLYGFLALFT 431 (547)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~ 431 (547)
++.+... .......+..+...+.++++|+++||+|++ +++..+.....+.... .... .+.+...+.+.
T Consensus 280 ~~~~~~~-~~l~~~~l~~l~~~l~rplgG~LADRiG~~-----~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~ 353 (462)
T PRK15034 280 KTQFPDV-NILRLAFFGPFIGAIARSVGGAISDKFGGV-----RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFM 353 (462)
T ss_pred HHHcChH-HHHHHHHHHHHHHHHHHHhhHHHHHhcCch-----HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 7755321 111223344577788899999999999998 5555444433333221 1111 13344444444
Q ss_pred HHHHHHhhcCccceeeeecccCC---------------------cchhHHHHHHHHHHHhhcCCCccchhhhhhcccchh
Q 008957 432 VGELLVFATQAPVNYVCLHSVKP---------------------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 490 (547)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~---------------------~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 490 (547)
...++.+......+-.+...+|+ ++.|.+.|+....... |+++-|.+.|...+.+|++
T Consensus 354 ~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~-Ggf~~p~~~g~~~~~~g~~ 432 (462)
T PRK15034 354 GLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAV-GGFFIPQAFGMSLNMTGSP 432 (462)
T ss_pred HHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHcCCc
Confidence 44455556666666566555542 1567888888666666 7788898999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 008957 491 RKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~ 510 (547)
...++.+.+..+++.++...
T Consensus 433 ~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 433 VGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777766554
No 24
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1e-34 Score=284.45 Aligned_cols=373 Identities=12% Similarity=0.055 Sum_probs=275.4
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
++++...+++.++....+...++. .+|.+.+++|+|..+.+++.+.+.+++.+++++.|++.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~-----------------~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d 67 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGM-----------------VMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLME 67 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh-----------------hhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777778777777666664 458999999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (547)
|+|||++++.+.++.+++.+++++++|++.+++.|+++|++.+...+....++.|++|+++|+++++..+....+|..++
T Consensus 68 r~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 147 (394)
T PRK03699 68 IIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIF 147 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhc-CCCCchhHHHHHHHHHHHHHHHHHhhc-cCccCCCCCCCccccccccccccCCcCCCCCcccccccccchh
Q 008957 223 YVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQAS 300 (547)
Q Consensus 223 ~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (547)
|.+.+.+. ...|||+.|++.+++.++..++.++.. |+ +++++.. + . +
T Consensus 148 ~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~---~--------~------~------- 196 (394)
T PRK03699 148 PIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA-------LGKHAPK---A--------D------K------- 196 (394)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc-------ccccCcc---c--------c------C-------
Confidence 99888765 457999999998887776655443321 11 0000000 0 0 0
Q ss_pred hhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhccccc
Q 008957 301 ERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGI 379 (547)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 379 (547)
+ ..+. ..++.++...+..++.....+.+..|.|.|+++.++.+.... .+.....++.+
T Consensus 197 ----~----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ 255 (394)
T PRK03699 197 ----P----------------VAKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYM 255 (394)
T ss_pred ----c----------------cccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHH
Confidence 0 0000 013455666666667767777888999999988778776443 44556677889
Q ss_pred ccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhH
Q 008957 380 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 459 (547)
Q Consensus 380 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 459 (547)
+++++.+++.||+++| +.+.....+....+.+....++.+...+..++.+++.+..++.......+.. ++.+++
T Consensus 256 ig~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~ 329 (394)
T PRK03699 256 VGMWIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPK 329 (394)
T ss_pred HHHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHH
Confidence 9999999999999998 4554444444443333333444444444555566655555555444444444 445677
Q ss_pred HHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 008957 460 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 460 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
..+......+. |..++|.+.|++.+..| +...+++.+++.+++.++.....
T Consensus 330 ~~g~~~~~~~~-g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 330 LVNFILTCGTI-GTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred HHHHHHHhhhH-HHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHHH
Confidence 77887766665 88999999999999876 66777777777666655544433
No 25
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.5e-34 Score=286.45 Aligned_cols=380 Identities=11% Similarity=0.075 Sum_probs=257.7
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCcccccc-cccccc--ccCccchhHHH-----HHHHHHHhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGS-GIQGDF--KLNNFQDGVLS-----SAFMVGLLVAS 134 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~ 134 (547)
+++.+...++.++++++|...++... | .+.+++ +.++. .+++. ++..++..+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ 81 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITA-----------------ALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGG 81 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHH
Confidence 35677788889999999999887521 3 345555 56655 46554 34556778999
Q ss_pred hhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHH--------HHHHHHHHhhhhhhhhhhcccccccccCCCCCcch
Q 008957 135 PIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 206 (547)
Q Consensus 135 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 206 (547)
++.|+++||+|||++++++.++++++++++++++|++ .++++|+++|++.|..++....++.|++|+++|++
T Consensus 82 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~ 161 (438)
T PRK09952 82 VVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAF 161 (438)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcH
Confidence 9999999999999999999999999999999999987 58889999999999999999999999999999999
Q ss_pred hhhHHHHhhhhhhhhhhhhHHhhc--------CCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcccccccccc
Q 008957 207 WLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 278 (547)
Q Consensus 207 ~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 278 (547)
..+..+.+..+|.+++..+...+. ..+|||+.|++.+++.++. +......||+++.....++.+
T Consensus 162 ~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~------- 233 (438)
T PRK09952 162 YSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQA------- 233 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhcc-------
Confidence 999999999999999887766554 3579999999887765432 222222344321100000000
Q ss_pred ccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHH-HHHHHHHHHHHHhhhcccee
Q 008957 279 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKAG 357 (547)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~ 357 (547)
+ .+++ ....+.++++++.+...+ ..++.....+....|.|.|+
T Consensus 234 -------~----------------~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 277 (438)
T PRK09952 234 -------A----------------AKKR-------------IPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYS 277 (438)
T ss_pred -------c----------------cccc-------------CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000122345555554433 34455566677778888888
Q ss_pred EeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH---hh-hHHHHHHHHHH
Q 008957 358 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS-SLYGFLALFTV 432 (547)
Q Consensus 358 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~ 432 (547)
++..+.+.... ....+..+..+++.++.|+++||++|| +.+..+.++..+..+.... .. ..+..+...++
T Consensus 278 ~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 77777665332 223344566677888899999999998 4444443333322221111 11 22222333344
Q ss_pred HHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc-chhHHHHHHHHHHHHHHHHHHH
Q 008957 433 GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
.+++.+...+....+..|.+|++.|+++.|+.+.....+|+.++|.+.+++.+.. ++|...+.+.+++.+++.+..+
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 4455555556666777888888999999999776666457788999999998855 3576677766666666555544
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=5.4e-35 Score=289.11 Aligned_cols=387 Identities=12% Similarity=0.073 Sum_probs=271.5
Q ss_pred CCchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhh
Q 008957 61 FTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASL 140 (547)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 140 (547)
+.+|+.+..+++.++.++++...++. ..|.+.+++|++..+.+++.+++.++..+++++.|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l 70 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVAL-----------------VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLW 70 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567888899999999999988875 4489999999999999999999999999999999999
Q ss_pred hhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhh
Q 008957 141 AKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA 220 (547)
Q Consensus 141 ~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 220 (547)
+||+|||++++++.++.++++++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+
T Consensus 71 ~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (405)
T TIGR00891 71 GDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAV 150 (405)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHhhcCCCC--chhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccc
Q 008957 221 LGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (547)
Q Consensus 221 ~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (547)
+++.+++.+.+..+ ||+.|++.+++.++.. +.....||++...+++++++.. .+..++.
T Consensus 151 ~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ 211 (405)
T TIGR00891 151 VAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------------RTMVDIL 211 (405)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------------hhHHHHH
Confidence 99999998887666 9999998765554433 3333345532211000000000 0000000
Q ss_pred hhhhhcccccchhhhhhhhhhhhhhHhhc-cc-chhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhc
Q 008957 299 ASERSIKSIGESRFLNQLSQFSQDTKVLL-QE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI 375 (547)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 375 (547)
...+... + ...++.....+... ++ +.+....+...+..........+.|.|+.+..+.+.... .+.....
T Consensus 212 ~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 284 (405)
T TIGR00891 212 YGGEHRI---A----NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSN 284 (405)
T ss_pred hccchhh---h----hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHH
Confidence 0000000 0 00000001111111 11 112223333334444455666778888877677765443 4455667
Q ss_pred ccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCC
Q 008957 376 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA-FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 454 (547)
Q Consensus 376 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (547)
++.+++.++.+++.||+++| +.+..+..+.....+.. ....+.+...+..++.+++.....+.....+.+..|+
T Consensus 285 ~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
T TIGR00891 285 IGAIVGGCVFGFLGDWLGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPT 359 (405)
T ss_pred HHHHHHHHHHHHHHHHhCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCc
Confidence 88899999999999999998 45544444332222222 2223333333443445555555556666777888889
Q ss_pred cchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHH
Q 008957 455 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 496 (547)
Q Consensus 455 ~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 496 (547)
+.|+++.|+.+...+. |..++|.+.|++.|+.|.|...+..
T Consensus 360 ~~~~~~~g~~~~~~~~-g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 360 DQRAAGLGFTYQLGNL-GGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred chhHHHhhHHHHHHHH-HHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999888877 8889999999999988867554443
No 27
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-35 Score=283.11 Aligned_cols=373 Identities=18% Similarity=0.204 Sum_probs=270.6
Q ss_pred CCCCCchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhh
Q 008957 58 PSWFTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIF 137 (547)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~ 137 (547)
..++.+.+++..++..++..+.|+.+++.+.+ ..+.+|.+....+.+++.++|.++++++.+++
T Consensus 38 l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l----------------~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~ 101 (495)
T KOG2533|consen 38 LLRKLDLFILPFLCYLYFHAYLDKSSIVNASL----------------SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPS 101 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchhcchhHHH----------------cCCccccchhhhhhhhHHHHHHHHHHHHHhhH
Confidence 34555667788888899999999999987544 55779999999999999999999999999999
Q ss_pred hhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhh
Q 008957 138 ASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT 217 (547)
Q Consensus 138 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 217 (547)
|.+.||++..+.+....+++++..++.+..+|++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++
T Consensus 102 ~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~ 181 (495)
T KOG2533|consen 102 GLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASL 181 (495)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcch
Confidence 99999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHhh------cCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccc
Q 008957 218 GVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHV 291 (547)
Q Consensus 218 G~~~g~~l~~~l------~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (547)
|.++|.+++..+ ....||||.|++.|+++++..++.++++|+.+... +..+++|+
T Consensus 182 g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~------~fl~~~ek------------- 242 (495)
T KOG2533|consen 182 GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA------WFLTDEEK------------- 242 (495)
T ss_pred hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhc------cccchHHH-------------
Confidence 999999999886 34679999999999999999999999998855422 11111110
Q ss_pred ccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-Hhh
Q 008957 292 SEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMF 370 (547)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~ 370 (547)
+...++.++....... + +..+..+++.+++|.+|...+..++.....+++.+|+|.|+.+..+.+... ..+
T Consensus 243 -~~~~~~~~~~~~~~~~-----~--~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~l 314 (495)
T KOG2533|consen 243 -ELVVERLRESPSGGIE-----N--KFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLL 314 (495)
T ss_pred -HHHHHHHHhccCCCcc-----c--ccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccc
Confidence 0000000000000000 0 012356788899999999999999999999999999999999955565434 366
Q ss_pred hhhhcccccccceeeeeeeeccc----ccchhHHHHHHHHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccce
Q 008957 371 GGVTIVCGIVGTISGGFILDQMG----ATISNAFKLLSAAT-FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 445 (547)
Q Consensus 371 ~~~~~~~~~~~~~~~g~l~d~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (547)
.....++++++.+++|+++||++ +| ....... +.....++..........................+...
T Consensus 315 s~~~~~~g~v~~i~ag~lsdr~~~~~~~~-----~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (495)
T KOG2533|consen 315 STPYDVGGIVGLILAGYLSDRLKTIFARR-----LLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIAL 389 (495)
T ss_pred cchHHhhhHHHHHHHHHHHHHHhhhHHHH-----HHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHH
Confidence 77788999999999999999954 33 3333222 23333323333333233333333333333444444455
Q ss_pred eeeecccCCcc-hhHHHHHHHHHHHhhcCCCccch
Q 008957 446 YVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPL 479 (547)
Q Consensus 446 ~~~~~~~~~~~-r~~~~g~~~~~~~~~g~~~~~~~ 479 (547)
....+...++. +-+..+......+. +++++|.+
T Consensus 390 ~w~s~~~~g~~k~~~~~~~~i~~~~s-~~~~~~~~ 423 (495)
T KOG2533|consen 390 SWTSANLAGNTKALTTVSAIIDGTGS-AGAISGQL 423 (495)
T ss_pred hhccccccchHHhHHHHhhhhcchhH-HHHhhhhh
Confidence 55555555543 33444444344444 33334433
No 28
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=8.2e-35 Score=289.20 Aligned_cols=364 Identities=15% Similarity=0.102 Sum_probs=255.7
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
+++.+..+.+.++.+.++....+. ..|.+++++|+++.+.+++.+++.+++.++++++|+++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~d 78 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFY-----------------IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLAD 78 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677778888888888887765 448899999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (547)
|+|||++++++.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.+++
T Consensus 79 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 158 (426)
T PRK12307 79 KFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIA 158 (426)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhh
Q 008957 223 YVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASER 302 (547)
Q Consensus 223 ~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (547)
+.+.+.+.+..+||+.|++..+..++ .+......||+.+.. +++ . +....
T Consensus 159 ~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~----~~~-~---------~~~~~--------------- 208 (426)
T PRK12307 159 AYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEWE----EAK-L---------SGKGK--------------- 208 (426)
T ss_pred HHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHHH----Hhh-h---------hcccc---------------
Confidence 99999999889999999985433222 111111123221100 000 0 00000
Q ss_pred hcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH---HHHHHHHHHhhhccceeEeeccCchhh-Hhhhhhhcccc
Q 008957 303 SIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI---AYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCG 378 (547)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 378 (547)
..+ ...+.....++.+++++.++....... +.......+..++|.|+++. +.+... .....+..++.
T Consensus 209 -~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~ 279 (426)
T PRK12307 209 -HSQ-------SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGT 279 (426)
T ss_pred -ccc-------cchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
Confidence 000 000011124556777777655433222 22223334566788887764 454433 24445667888
Q ss_pred cccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--hhcCccceeeeecccCCcc
Q 008957 379 IVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV--FATQAPVNYVCLHSVKPSL 456 (547)
Q Consensus 379 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 456 (547)
+++.++.+++.||++|| +.+..+.++..+..++...........+..++.+.+. .+..+.....+.+.+|++.
T Consensus 280 ~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 354 (426)
T PRK12307 280 VLGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV 354 (426)
T ss_pred HHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH
Confidence 99999999999999998 5555554444443333322221111112222222211 1222334455678888899
Q ss_pred hhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 457 RALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 457 r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
|+++.|+.+...+. |..++|.+.|++.+..|
T Consensus 355 ~g~~~g~~~~~~~~-~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 355 RGLGTGLIYNLAAT-SGTFNSMAATWLGITMG 385 (426)
T ss_pred HhhhhhHHHHHHhH-HHHHHHHHHHHHHHccc
Confidence 99999999888887 88889999999999876
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=9.1e-35 Score=284.87 Aligned_cols=370 Identities=16% Similarity=0.173 Sum_probs=267.8
Q ss_pred HHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHH
Q 008957 73 INMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV 152 (547)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 152 (547)
.++..++++..++. ..|.+.+++|++..+.|++.+++.++..+++++.|+++||+|||+++++
T Consensus 3 ~~~~~~~~~~~~~~-----------------~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 65 (379)
T TIGR00881 3 GYAAYYLVRKNFAL-----------------AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPI 65 (379)
T ss_pred hhhHHHHhHHhhhh-----------------hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHH
Confidence 45566677777765 4489999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhh-hhHHhhcC
Q 008957 153 GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY-VYGGVVGS 231 (547)
Q Consensus 153 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~l~~~l~~ 231 (547)
+.++.+++.++.+++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 66 GLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 57777777
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchh
Q 008957 232 HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR 311 (547)
Q Consensus 232 ~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (547)
..+||+.|++.+++.++..++.+++.|+.++....++.++... + +.+ ...+.++++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------~~~---~~~~~~~~~------ 201 (379)
T TIGR00881 146 LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN--------E-------EPD---GDAEKKEEE------ 201 (379)
T ss_pred cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc--------c-------ccc---ccccccccc------
Confidence 8899999999998888777777766666433211111000000 0 000 000000000
Q ss_pred hhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeee
Q 008957 312 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD 390 (547)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d 390 (547)
.+......+.++++|.++...+..++.......+..+.|.|+++..+.+.... .......++.+++.++.+++.|
T Consensus 202 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 277 (379)
T TIGR00881 202 ----LTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSD 277 (379)
T ss_pred ----ccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHH
Confidence 00011234567788989888888888888888888899999888777775443 4456667888999999999999
Q ss_pred cccccchhHHHHHHHHH-HHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHH
Q 008957 391 QMGATISNAFKLLSAAT-FLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 467 (547)
Q Consensus 391 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~ 467 (547)
|..+++. ..+.... ............ ..+........++.+.+.....+.......+..|++.|+++.|+.+..
T Consensus 278 r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 354 (379)
T TIGR00881 278 KLFNGRR---GPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFF 354 (379)
T ss_pred HHcCCcc---hHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHh
Confidence 8644321 1221111 111111111111 122333333334444433333344445667888889999999999888
Q ss_pred HHhhcCCCccchhhhhhcccchhHH
Q 008957 468 IHIFGDVPSSPLVGVLQDHVNNWRK 492 (547)
Q Consensus 468 ~~~~g~~~~~~~~g~l~~~~~~~~~ 492 (547)
.+. |..++|.+.|.+.|..| |+.
T Consensus 355 ~~~-g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 355 AYL-GGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred hhh-hhhhhhhhHHHHHHhhc-ccc
Confidence 777 88899999999999865 544
No 30
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.3e-34 Score=284.24 Aligned_cols=357 Identities=13% Similarity=0.083 Sum_probs=241.7
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHH-HHH-----HHHHhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLS-SAF-----MVGLLVASPI 136 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~-s~~-----~~~~~~~~~~ 136 (547)
+|+....++++.+++++|+.+++. ..|.+.+|++.++.+.+.+. +.. .++..+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~ 75 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGF-----------------YATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIV 75 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHH
Confidence 345788889999999999999986 44999999999888765443 322 2333578999
Q ss_pred hhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHH--------HHHHHHHhhhhhhhhhhcccccccccCCCCCcchhh
Q 008957 137 FASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 208 (547)
Q Consensus 137 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 208 (547)
.|+++||+|||+.++.+.+++++++++++++++++. ++++|+++|++.+...+....+++|++|+++|++++
T Consensus 76 ~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 155 (434)
T PRK15075 76 LGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT 155 (434)
T ss_pred HHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence 999999999999999999999999999999999874 688999999999999998999999999999999999
Q ss_pred hHHHHhhhhhhhhhhhhHHhhc--------CCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcccccccccccc
Q 008957 209 SMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 280 (547)
Q Consensus 209 ~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 280 (547)
++...+.++|..+++.+++.+. +.+|||++|++..+...+ ........||. ++....+ .
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~---------~~~~~~~-~-- 222 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEET---------EEFLARK-H-- 222 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCC---------HHHHHhh-h--
Confidence 9999998888888888777652 468999999975433211 11111111211 0000000 0
Q ss_pred CCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHH-HHHHHHHHHHHHHHhhhccceeEe
Q 008957 281 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYN 359 (547)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~ 359 (547)
+ ...+ +.++...+++..+.. .+..++.....+.+..|.|.|+++
T Consensus 223 ------------------------~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 267 (434)
T PRK15075 223 ------------------------R--------PSMR---EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKT 267 (434)
T ss_pred ------------------------c--------cccc---cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 111222233333332 233334455566788899999988
Q ss_pred eccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH-HH-HH-h-hhHHHHHHHHHHHH
Q 008957 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA-FC-L-SSLYGFLALFTVGE 434 (547)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~-~~~~~~~~~~~~~~ 434 (547)
..+.+.... ....+..++++++.++.|+++||++|| +.......+.....+ .. .. . ++.........+.+
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLS 342 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 777765443 444566678889999999999999998 444433322222111 11 11 1 12222222223333
Q ss_pred HHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccch
Q 008957 435 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 489 (547)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 489 (547)
++.+...+.......+..|++.|+++.++.+.....+++.++|.+.|++.|..|.
T Consensus 343 ~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 343 FLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 4444444444556778888999999999976666654556789999999998763
No 31
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=2.1e-34 Score=290.72 Aligned_cols=417 Identities=15% Similarity=0.095 Sum_probs=263.8
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccc-----cccCccchhHHHHHHHHHHhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGD-----FKLNNFQDGVLSSAFMVGLLVASPI 136 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~-----~~~s~~~~g~~~s~~~~~~~~~~~~ 136 (547)
..++++.++.++.+..++|...++.. .|.+.++ .+.+..+.+++.+.+.+++.+++++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~ 75 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLV-----------------TKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLF 75 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777788888899998888752 2444443 3455667899999999999999999
Q ss_pred hhhhhhhcCCceehHHHHHHHHHHHHhhhcccc------HHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhH
Q 008957 137 FASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 210 (547)
Q Consensus 137 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 210 (547)
+|+++||+|||+++.++++++.+++++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++
T Consensus 76 ~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~ 155 (502)
T TIGR00887 76 FGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAA 155 (502)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHH
Confidence 999999999999999999999999999988876 78999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhHHhhcC-----------------------CCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCC
Q 008957 211 FYMCIPTGVALGYVYGGVVGS-----------------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 267 (547)
Q Consensus 211 ~~~~~~~G~~~g~~l~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 267 (547)
.+....+|.++++.++..+.. ..+||+.|.+.++++++..+. .++.||+++....+
T Consensus 156 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~ 234 (502)
T TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADV 234 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHh
Confidence 999999999999988765421 247999998888877655444 45568887753221
Q ss_pred Ccc-c-cccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcc----cc---hhHHHHHH
Q 008957 268 ESG-K-AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ----EK---VYVVNVLG 338 (547)
Q Consensus 268 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~ 338 (547)
++. + ......+....+ .++ +.++.++... + ++... .+++++++ ++ ..+.....
T Consensus 235 ~~~~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~-~--~~~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~ 296 (502)
T TIGR00887 235 AKDVEQAASDMSAVLQVK---IEA-EPDEVEKAST-A--VEVPK-----------ASWSDFFTHFFKWRHGKHLLGTAGS 296 (502)
T ss_pred CcchHHHHHHHHHHhccc---ccc-Ccccccchhc-c--ccchh-----------hhHHHHHHHHhhhHHHHHHHHHHHH
Confidence 111 1 110000000000 000 0001000000 0 00000 11222322 11 11222223
Q ss_pred HHHHHHHHHHHhhhccceeEeeccCchhh-------------HhhhhhhcccccccceeeeeeeecccccchhHHHHHHH
Q 008957 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNAD-------------MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 405 (547)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 405 (547)
.++....+++...|.|.++++. +.+... .....+..++.+++.+++++++||+||| +.++.
T Consensus 297 ~~~~~~~~y~~~~~~p~i~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~ 370 (502)
T TIGR00887 297 WFLLDIAFYGVNLNQKVILSAI-GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-----PIQLM 370 (502)
T ss_pred HHHHHHHHHccccccHHHHHHH-cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-----hHHHH
Confidence 3344445666777788877653 332110 0122333456677888999999999999 55554
Q ss_pred HHHHHHHHHHHHHH-hh--hHHHHHHHHHHHHHHHh-hcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhh
Q 008957 406 ATFLGAISCLTAFC-LS--SLYGFLALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (547)
Q Consensus 406 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g 481 (547)
+..+..+.+++... .. +........++..++.. ...+....+..|.+|++.|+++.|+.+.+.++ |++++|.+.+
T Consensus 371 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~ 449 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA-GAIIGQFGFL 449 (502)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh-HHHHHHHHhh
Confidence 44443333322222 11 11112222222222222 23344455567888889999999999988887 8888999999
Q ss_pred hhhcccc---------hhHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccchh
Q 008957 482 VLQDHVN---------NWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDG 524 (547)
Q Consensus 482 ~l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 524 (547)
.+.+..+ ++...+++++++.+++.+..+ ++|| ++++.||.
T Consensus 450 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~---~lpEt~~~~leei 499 (502)
T TIGR00887 450 YLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL---LIPETKGKSLEEL 499 (502)
T ss_pred hhhccccccccccccccchHHHHHHHHHHHHHHHHhe---EeccCCCCCHHhh
Confidence 9987431 133566777666665544332 4455 55555443
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.5e-34 Score=290.24 Aligned_cols=419 Identities=15% Similarity=0.109 Sum_probs=257.2
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCcccccccccccc--------ccCccchhHHHHHHHHHHhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDF--------KLNNFQDGVLSSAFMVGLLVAS 134 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~ 134 (547)
..+.++++.++.+...+|...++. .+|.++++| ++++.+.+++.+++.++..+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~ 72 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISG-----------------TVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGG 72 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehH-----------------hHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHH
Confidence 345666677778888888888775 225555555 8899999999999999999999
Q ss_pred hhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc------------ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCC
Q 008957 135 PIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 202 (547)
Q Consensus 135 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 202 (547)
+++|+++||+|||++++++.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|++
T Consensus 73 ~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~ 152 (479)
T PRK10077 73 ALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH 152 (479)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh
Confidence 999999999999999999999999998887763 22567889999999999999999999999999999
Q ss_pred CcchhhhHHHHhhhhhhhhhhhhHHhhc--------CCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcccccc
Q 008957 203 QKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 274 (547)
Q Consensus 203 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 274 (547)
+|++++++.+.+..+|.++++.+++.+. +..|||+.|++.+++.++..+. .++.||+++....+++.+..
T Consensus 153 ~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~- 230 (479)
T PRK10077 153 IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQA- 230 (479)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHH-
Confidence 9999999999999999999988776543 4579999999998887776554 45567754321110000000
Q ss_pred ccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHH---HHHHHHHHHHHHHHhh
Q 008957 275 VASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN---VLGYIAYNFVIGAYSY 351 (547)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 351 (547)
.+.. .+..... +..+..+ +.....+......+..+........ ....+......+...+
T Consensus 231 ~~~~-~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (479)
T PRK10077 231 EGIL-RKIMGNT---LATQALQ--------------EIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLY 292 (479)
T ss_pred HHHH-HHHcCCh---hHHHHHH--------------HHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHH
Confidence 0000 0000000 0000000 0000000000000111110000110 1111111222334455
Q ss_pred hccceeEeeccCchh-hHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh--hh-H-HHH
Q 008957 352 WGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SS-L-YGF 426 (547)
Q Consensus 352 ~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~ 426 (547)
+.|.+.++ .+.+.. .........+..+++.+++++++||++|| +.++.+..+..+..+..... .+ . ...
T Consensus 293 ~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 293 YAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 66766554 344322 23334455677888899999999999998 56655555544443333221 11 1 122
Q ss_pred HHHHHHHHHHHhhcC-ccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhh------cccchhHHHHHHHHH
Q 008957 427 LALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ------DHVNNWRKTTLALTS 499 (547)
Q Consensus 427 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~------~~~~~~~~~~~~~~~ 499 (547)
....++.+++....+ +.....+.+.+|++.|+++.|+.+...++ |.++++.+.+.+. +..+ +...|++.++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ 444 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhccchhhhcc-CccHHHHHHH
Confidence 223333333333333 44566778888889999999999877777 7777765555443 4444 4456666665
Q ss_pred HHHHHHHHHHHHHhhcc-cccccchhhhhh
Q 008957 500 IFFLAAGIWFVGIFLKS-IDKFNEDGENQI 528 (547)
Q Consensus 500 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 528 (547)
..+++.++.+. ..+| ++++.+|.++..
T Consensus 445 ~~~~~~~~~~~--~~~e~~~~~~~~~~~~~ 472 (479)
T PRK10077 445 MGVLAALFMWK--FVPETKGKTLEEMEALW 472 (479)
T ss_pred HHHHHHHHHHh--ccccCCCCCHHHHHHHH
Confidence 55544443322 3344 555555554443
No 33
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.2e-34 Score=293.58 Aligned_cols=389 Identities=14% Similarity=0.134 Sum_probs=247.2
Q ss_pred cccccccccccC--------ccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc---ccHHH
Q 008957 104 SGSGIQGDFKLN--------NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWS 172 (547)
Q Consensus 104 ~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~ 172 (547)
..+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++.++++++.+++.++ .+++.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (481)
T TIGR00879 50 ALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEM 129 (481)
T ss_pred hhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 347777777776 8899999999999999999999999999999999999999999999998543 45668
Q ss_pred HHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhH---HhhcCCCCchhHHHHHHHHHHHH
Q 008957 173 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILMLPF 249 (547)
Q Consensus 173 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~---~~l~~~~gwr~~f~~~~~~~~~~ 249 (547)
++++|+++|++.+...+...+++.|++|+++|++++++++.+..+|..++++++ ....+..+||+.|++.++..++.
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~ 209 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLL 209 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 77777889999999966655544
Q ss_pred HHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcc-
Q 008957 250 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ- 328 (547)
Q Consensus 250 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 328 (547)
. +..++.||++.....+++.+... +.. .+..... .+..+..+............. +..+..+......++
T Consensus 210 ~-~~~~~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 280 (481)
T TIGR00879 210 F-LGLFFLPESPRWLVGKGRVEEAR-KSL-ARLRGTS--GEDKELLDELELIDIKRSIEK----RSVQPSWGSLFSSTRR 280 (481)
T ss_pred H-HHHhcCCCChHHHHHcCChHHHH-HHH-HHHhCCC--CCcHHHHHHHHHHHHHHHHHH----hhccccHHHHHhcCch
Confidence 4 44445566443211111110000 000 0000000 000000000000000000000 000000122222222
Q ss_pred --cchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCch-hhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHH
Q 008957 329 --EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 405 (547)
Q Consensus 329 --~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 405 (547)
.+.++...+..+........+.++.|.+.++. +.+. ..........++.+++.++++++.||++|| +.+..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~ 354 (481)
T TIGR00879 281 IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENA-GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLLLI 354 (481)
T ss_pred hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHH
Confidence 23333333434433333445566667666543 4443 233445566778889999999999999998 45544
Q ss_pred HHHHHHHHHHHHHH----hhh------HHHHHHHHHHHHHHHhhcCcc-ceeeeecccCCcchhHHHHHHHHHHHhhcCC
Q 008957 406 ATFLGAISCLTAFC----LSS------LYGFLALFTVGELLVFATQAP-VNYVCLHSVKPSLRALSMAISTVSIHIFGDV 474 (547)
Q Consensus 406 ~~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~ 474 (547)
+..+..+..++... ..+ ....+....+...+.+....+ ......+..|++.|+++.|+.+...++ |.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l-g~~ 433 (481)
T TIGR00879 355 GAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWL-ANF 433 (481)
T ss_pred HHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHH-HHH
Confidence 44433333333221 111 222333333333444434433 344447777889999999999888777 888
Q ss_pred CccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 475 PSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 475 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
++|.+.+.+.+..+ +...|++.+++.+++.++.+
T Consensus 434 i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 434 IVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHh
Confidence 89999999988765 66778777777666555443
No 34
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.1e-34 Score=291.15 Aligned_cols=377 Identities=15% Similarity=0.124 Sum_probs=258.6
Q ss_pred ccccccccccccC---ccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 008957 103 TSGSGIQGDFKLN---NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (547)
Q Consensus 103 p~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (547)
+..|.+.+|+|++ ..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.+++++++|++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4568999999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.|++.+++.++..+.. ++.||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 9999999999999999999999999999999999999999999998877654 9999999999887776665 55677
Q ss_pred ccCCCCCCCccccc-cccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHH
Q 008957 260 QLKGFAPAESGKAQ-VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 338 (547)
Q Consensus 260 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (547)
+++....+.+.+.. ...++..+.+.... ..+..+...+++... +....++++++++|.++...+.
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~ 331 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKL---PAEVLSLSLEKDLSS-----------SKKQYSFLDLFRTPNLRKTTLC 331 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCC---CHHHHhhhhhhhhhh-----------ccCCCcHHHHhCChHHHHHHHH
Confidence 65432211111100 00000000000000 000000000000000 0001345677888887776655
Q ss_pred HHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (547)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (547)
.....+......+..+.+... .+.+ ......+..+..+++.++.+++.||+||| ..+....++..+.+++..
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~ 403 (505)
T TIGR00898 332 LMMLWFTTAFSYYGLVLDLGN-LGGN--IYLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLL 403 (505)
T ss_pred HHHHHHHHHHHHHHHhccccc-cCCC--hHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHH
Confidence 444433332222223333322 2222 12222344567788888999999999998 566665555555554444
Q ss_pred HhhhH--HHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHH
Q 008957 419 CLSSL--YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 496 (547)
Q Consensus 419 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 496 (547)
..++. +...+..++.+++....++..+.+..|.+|++.|+++.|+.+....+ |.+++|.+.+ +.+. + +..++.+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~~-~-~~~~~~~ 479 (505)
T TIGR00898 404 FVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGEK-W-LFLPLVL 479 (505)
T ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHHH-H-HhhHHHH
Confidence 43322 34444555555666666677777888889999999999999887777 8899998888 4442 3 3466666
Q ss_pred HHHHHHHHHHHHH
Q 008957 497 LTSIFFLAAGIWF 509 (547)
Q Consensus 497 ~~~~~~~~~~~~~ 509 (547)
++++.+++.++.+
T Consensus 480 ~~~~~~~~~~~~~ 492 (505)
T TIGR00898 480 FGGLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666555444
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.1e-33 Score=278.89 Aligned_cols=357 Identities=12% Similarity=0.057 Sum_probs=263.9
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 143 (547)
+.....+.+..+...++...+. |.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr 74 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQ-----------------PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR 74 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHh-----------------cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555666555555544 35588999999999999999999999999999999999999
Q ss_pred cCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhh
Q 008957 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (547)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (547)
+|||++++++.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||
T Consensus 75 ~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 154 (406)
T PRK15402 75 IGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGP 154 (406)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988888999999999999999999999988889999999
Q ss_pred hhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhh
Q 008957 224 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 303 (547)
Q Consensus 224 ~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (547)
.+++.+.++.+||+.|++.++..++..+..++..||+++..+ ++ .
T Consensus 155 ~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~------------------------------ 199 (406)
T PRK15402 155 LVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVG----EK-L------------------------------ 199 (406)
T ss_pred HHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccc----cc-c------------------------------
Confidence 999999988999999999998888777666665565321100 00 0
Q ss_pred cccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccc
Q 008957 304 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGT 382 (547)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 382 (547)
..++..++++.++++|.++...+..++..........+.|.++.+..+.++... .......++.+++.
T Consensus 200 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~ 268 (406)
T PRK15402 200 -----------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN 268 (406)
T ss_pred -----------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 000112445677889988887777666666566666677888776667765443 22333446778888
Q ss_pred eeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcch
Q 008957 383 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR 457 (547)
Q Consensus 383 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 457 (547)
++.+++.||+++| +.+..+..+.....++.... .+.+......++.+++.+...+....... ..+++.+
T Consensus 269 ~~~g~l~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~ 342 (406)
T PRK15402 269 LTLARLTSRRPLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSK 342 (406)
T ss_pred HHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccc
Confidence 9999999999988 44444443333322222211 23333444555566665555554433332 3345899
Q ss_pred hHHHHHHHHHHHhhcCCCccchhhhhhcccchh
Q 008957 458 ALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 490 (547)
Q Consensus 458 ~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 490 (547)
|+..+..+..... |..+|+.+.+++.+..+.+
T Consensus 343 g~~~~~~~~~~~~-~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 343 GTVSAAMGMLSML-IFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHhcccCCchH
Confidence 9999999877776 7788999999998887644
No 36
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-33 Score=253.70 Aligned_cols=373 Identities=15% Similarity=0.114 Sum_probs=299.4
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 143 (547)
++.+.+..+...+++.-..+++... +.|.+|+|+|+.|.+++.++..+...+..++.|.+.||
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~-----------------~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr 75 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLG-----------------VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR 75 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc
Confidence 3556666666666666666676533 77889999999999999999999999999999999999
Q ss_pred cCCceehHHHHHHHHHHHHhhhccccHH---HHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhh
Q 008957 144 HNPFRLIGVGLSVWTFATAGCGSSFDFW---SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA 220 (547)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 220 (547)
||.|++..++.++..+-++..+++.+++ ++++.+.+.|++.+ .+.+...++++|+||+++|.++|++. ..++|..
T Consensus 76 fGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~a 153 (417)
T COG2223 76 FGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVA 153 (417)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHH
Confidence 9999999999999999999999886555 99999999999877 67789999999999999999999999 9999999
Q ss_pred hhhhhHHhhcCCCC---chhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccccccccc
Q 008957 221 LGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 297 (547)
Q Consensus 221 ~g~~l~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (547)
+..+++..+....| ||....+..+..++..++.++...+.+..+...++.+
T Consensus 154 v~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~-------------------------- 207 (417)
T COG2223 154 VAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL-------------------------- 207 (417)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc--------------------------
Confidence 99999999988888 9999999999888888888888755332211110000
Q ss_pred chhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcc
Q 008957 298 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV 376 (547)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~ 376 (547)
. ..++.+++++..|.+++.++.....+.++..++|.|+++.++.++... ........
T Consensus 208 --------------------~--~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~ 265 (417)
T COG2223 208 --------------------P--AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPL 265 (417)
T ss_pred --------------------h--hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHH
Confidence 0 235678899999999999999999999999999999999999997654 55667778
Q ss_pred cccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHhhcCccceeeee
Q 008957 377 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCL 449 (547)
Q Consensus 377 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (547)
.+.+.++++|+++||+|.+ +.+......++++..+.... .+.......+.....+.+......+-.+.
T Consensus 266 ~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip 340 (417)
T COG2223 266 IGALARPLGGWLSDRIGGR-----RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIP 340 (417)
T ss_pred HHHHHHhccchhhhhccch-----hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeech
Confidence 8888999999999999998 45554444444444333332 34455555566666777777777777766
Q ss_pred cccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 450 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 450 ~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
... +++.|.+.|+.....++ |+..-|...|...+.+|++...|+++..+.+++.+....
T Consensus 341 ~if-~~~~G~v~G~vga~G~l-GGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 341 VIF-PKETGAVTGIVGAIGGL-GGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred HHH-HhhhhHHHHHHHHhccc-cccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 654 56788999998766666 777779999999999998989999888887776665543
No 37
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-34 Score=278.53 Aligned_cols=368 Identities=15% Similarity=0.176 Sum_probs=281.5
Q ss_pred ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhhhhh
Q 008957 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 109 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~~ 186 (547)
..++++|+.+.+++.++++.|+.+++++.|+++||||.|+++..+.++.++++++...+- +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999988764 556789999999999999
Q ss_pred hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-CCchhHHHHHHHHHHHHHHHHHhhccCccCCCC
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (547)
.+|+...+.+.|.|++||++..++..++..+|.+++.+++|++.+. +||+++|++.++.+++..++++++..|.+.
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~--- 221 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS--- 221 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc---
Confidence 9999999999999999999999999999999999999999999988 999999999999999999988888755332
Q ss_pred CCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHH
Q 008957 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (547)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (547)
+++...++|+ +.+++....++.+. ....+++.+++++.+|...+..++.++.
T Consensus 222 ---~h~~is~~El--------------~~I~~~k~~~~~~~-----------~~~vP~~~i~ts~~vwai~~~~f~~~~~ 273 (466)
T KOG2532|consen 222 ---KHPNISEKEL--------------KYIEKGKSEAHVKK-----------KPPVPYKAILTSPPVWAIWISAFGGNWG 273 (466)
T ss_pred ---cCCCCCHHHH--------------HHHHhcccccccCC-----------CCCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence 2222211111 11111111111110 0125689999999999999999999999
Q ss_pred HHHHhhhccceeEeeccCchhh-Hhhhhhhcccccccceeeeeeeecccccc---hhHHHHHHHH-HHHHHHHHHHHHHh
Q 008957 346 IGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATI---SNAFKLLSAA-TFLGAISCLTAFCL 420 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~ 420 (547)
.+.+..|.|.|+++..+.+... ..+.+++.+...+..+++|.++||+.+|. ...+++.-.. ....++.++.+.+.
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 9999999999999999999644 46778999999999999999999997751 1123444333 33333333333333
Q ss_pred h--hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc--ccchhHHHHHH
Q 008957 421 S--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD--HVNNWRKTTLA 496 (547)
Q Consensus 421 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~--~~~~~~~~~~~ 496 (547)
+ +.+..++++.+...+.+.. ............|++.+..+|+.+....+ ..+++|.+.|.+.. ....|+..|++
T Consensus 354 ~~~~~~~a~~~l~~~~~~~g~~-~~Gf~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i 431 (466)
T KOG2532|consen 354 SDEHRLLAVILLTIAIGLSGFN-ISGFYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLI 431 (466)
T ss_pred CCCcchHHHHHHHHHHHHcccc-hhhhHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence 3 2223333333332333322 22333333333688999999999988888 66889999999984 23479999999
Q ss_pred HHHHHHHHHHHHH
Q 008957 497 LTSIFFLAAGIWF 509 (547)
Q Consensus 497 ~~~~~~~~~~~~~ 509 (547)
.+++.+++.+++.
T Consensus 432 ~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 432 AAGILIVGNIIFL 444 (466)
T ss_pred HHHHHHHhchhee
Confidence 9988888776554
No 38
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.8e-33 Score=277.93 Aligned_cols=396 Identities=13% Similarity=0.067 Sum_probs=269.7
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 143 (547)
+..+..+++.+...+.++..+.. ..|.+++ +|++.++.+++.+++.++..+++++.|+++||
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 87 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFAL-----------------AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR 87 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHh-----------------hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc
Confidence 44556666777777777776654 2366665 59999999999999999999999999999999
Q ss_pred cCCceehHHHHHHHHHHHHhhhcc----ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhh
Q 008957 144 HNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV 219 (547)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 219 (547)
+|||+.++++.++.+++.++.++. ++++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+.++|.
T Consensus 88 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 88 SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHh
Confidence 999999999999999998887764 5678888999999999999888889999999999999999999999999999
Q ss_pred hhhhhhHHhh-cCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccc
Q 008957 220 ALGYVYGGVV-GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (547)
Q Consensus 220 ~~g~~l~~~l-~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (547)
.+++.+.+.. ..+.+||+.|++.++++++..++.+++.||.++....++.++. +. +... +..+ .
T Consensus 168 ~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~---~~~~----~ 232 (438)
T TIGR00712 168 GIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEY-----RN---DYPD---DYNE----K 232 (438)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhc-----cc---cccc---cccc----c
Confidence 9988877654 3457899999999999888777777777764332110000000 00 0000 0000 0
Q ss_pred hhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhccc
Q 008957 299 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVC 377 (547)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~ 377 (547)
.+++ ...++ ...+.+++++.++...+..++.....+++.+|.|.|+++..+.+.... ....+..++
T Consensus 233 ----~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~ 299 (438)
T TIGR00712 233 ----AEQE-------LTAKE--IFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYA 299 (438)
T ss_pred ----cccc-------cchHH--HHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHH
Confidence 0000 00000 011346788999988887777777777888899999998777765443 444566678
Q ss_pred ccccceeeeeeeecccccchhHHHHHHHHHH-HHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhcCccceeeeecccCC
Q 008957 378 GIVGTISGGFILDQMGATISNAFKLLSAATF-LGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 454 (547)
Q Consensus 378 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (547)
++++.+++|++.||+++++. ........ ......+..... .+.+......++.+++.............+..|+
T Consensus 300 ~~ig~~~~g~l~dr~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 376 (438)
T TIGR00712 300 GIPGTLLCGWMSDKVFKGNR---GATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPK 376 (438)
T ss_pred HHHHHHHHHHHHHHhccCcc---cHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcCh
Confidence 89999999999999965421 11111111 111111111111 1222222222222222211111112235577788
Q ss_pred cchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 455 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 455 ~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
+.|+++.|+.+...+..|.+++|.+.|.+.|+.| |...+++..++.+++.+..+
T Consensus 377 ~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 377 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred hheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHH
Confidence 9999999999877777345689999999999876 77888777776666555544
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=4.4e-33 Score=274.15 Aligned_cols=363 Identities=13% Similarity=0.100 Sum_probs=252.2
Q ss_pred hHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccc-cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh
Q 008957 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (547)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 143 (547)
+-+..+++..++..++..... |.+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++||
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~-----------------~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr 77 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPL-----------------AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT 77 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc
Confidence 344555566666555544433 23354 678999999999999999999999999999999999
Q ss_pred cCCceehHHHHHHHHHHHHhhhcc--------ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhh
Q 008957 144 HNPFRLIGVGLSVWTFATAGCGSS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCI 215 (547)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 215 (547)
+|||++++.+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+.
T Consensus 78 ~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 157 (399)
T PRK05122 78 LGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIAT 157 (399)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhh
Confidence 999999999999988877665543 257789999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccccccc
Q 008957 216 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 295 (547)
Q Consensus 216 ~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (547)
.+|.++|+.+++.+.++.|||+.+++.++..++..+.. ...|+.. +++++ .
T Consensus 158 ~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~-~---------------------- 208 (399)
T PRK05122 158 YGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVP-----PVKGE-R---------------------- 208 (399)
T ss_pred hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCC-----CCCcc-c----------------------
Confidence 99999999999999999999999888766544332221 1111100 00000 0
Q ss_pred ccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhc
Q 008957 296 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTI 375 (547)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 375 (547)
.++++.++ ..+.......+..........+.|.|+.+. +.+.. ........
T Consensus 209 -------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 259 (399)
T PRK05122 209 -------------------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GWDGA-ALALTLFG 259 (399)
T ss_pred -------------------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccc-hHHHHHHH
Confidence 00011111 111111112222333444455566665543 22222 22234556
Q ss_pred ccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCc
Q 008957 376 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 455 (547)
Q Consensus 376 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (547)
++.+++.++.+++.||+++| +.+..+..+.....++....++.+..++..++.+++.+..++.......+..|++
T Consensus 260 ~~~~~~~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 334 (399)
T PRK05122 260 VAFVGARLLFGNLINRLGGL-----RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ 334 (399)
T ss_pred HHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH
Confidence 77788889999999999987 5555544444444444444455555555666677766666666556667788889
Q ss_pred chhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 456 LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 456 ~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
.|+++.|+.+...+. |..++|.+.|++.+..| |+..+++.+++.+++.++..
T Consensus 335 ~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 335 NRGAALGAYSVFLDL-SLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHH
Confidence 999999999877777 77778889999999865 88888887777666555444
No 40
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.4e-32 Score=269.93 Aligned_cols=349 Identities=10% Similarity=0.021 Sum_probs=247.3
Q ss_pred ccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHh
Q 008957 101 ICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 180 (547)
Q Consensus 101 ~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 180 (547)
+.|++|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
|++.+...+...+++.|++|+++|+++++++.....+|..+||++++.+.++.|||+.|++.+++.++..+..++..||+
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998777777888999999999999999999999999999999999999888999999999988887766656656764
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
++. ++++ . ..++.+++++.++++|.++...+..+
T Consensus 195 ~~~----~~~~-~-----------------------------------------~~~~~~~~~~~ll~~~~~~~~~l~~~ 228 (413)
T PRK15403 195 VKR----GAVP-F-----------------------------------------SAKSVLRDFRNVFRNRLFLTGAATLS 228 (413)
T ss_pred ccc----cCCC-C-----------------------------------------ChHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 321 0000 0 00011245677889999999888877
Q ss_pred HHHHHHHHHhhhccceeEeeccCchhhHh-hhhhhcccccccceeeeeee-ecccccchhHHHHHHHHHHHHHHHHHHH-
Q 008957 341 AYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFIL-DQMGATISNAFKLLSAATFLGAISCLTA- 417 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~- 417 (547)
+.......+..+.|.++++.++.+..... .......+.+++..+.+.+. |+.++|... .......++.......
T Consensus 229 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~---~~~~~~~ig~~l~~~~~ 305 (413)
T PRK15403 229 LSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW---RAVPIQLVGLALLIVGN 305 (413)
T ss_pred HHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH---HHHHHHHHHHHHHHHHH
Confidence 77777778888899999988888765543 23334455566556666554 443333110 0000111111111111
Q ss_pred -HHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHH
Q 008957 418 -FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 496 (547)
Q Consensus 418 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 496 (547)
...++.+..++..++.+.+.+...+....... .-.+..+|++.++.+..... +..+++...+++.+... ..++..
T Consensus 306 ~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~~~~~--~~~~~~ 381 (413)
T PRK15403 306 LLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILM-VMAVSVEIGRWLWFNGG--RLPFHL 381 (413)
T ss_pred HHccccHHHHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC--chHHHH
Confidence 11222222344555556666666555543221 11223478888888777766 55667878888877622 345555
Q ss_pred HHHHHH
Q 008957 497 LTSIFF 502 (547)
Q Consensus 497 ~~~~~~ 502 (547)
.+++..
T Consensus 382 ~~~~~~ 387 (413)
T PRK15403 382 LAVVAG 387 (413)
T ss_pred HHHHHH
Confidence 554433
No 41
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=7.7e-33 Score=271.71 Aligned_cols=329 Identities=17% Similarity=0.178 Sum_probs=250.5
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
|..|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++..++++++.+++.|++.|+
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 105 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF 105 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
+.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.++..++..+..++..||.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999988999999999998888777776666665321
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHH
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (547)
..+ ++ . .++.++.++..+++|.++...+.....
T Consensus 186 ~~~----~~-~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (385)
T TIGR00710 186 YEA----RI-Q------------------------------------------ISTYFETFLLLLKSKMFWGYALIYGAS 218 (385)
T ss_pred Ccc----cC-C------------------------------------------HHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 100 00 0 000113455677888888877776666
Q ss_pred HHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh-
Q 008957 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL- 420 (547)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 420 (547)
.........+.|.++++..+.++... .+.....++.+++.++.+++.||+++| +.+..+..+..+..++....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 293 (385)
T TIGR00710 219 FGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITA 293 (385)
T ss_pred HHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 66777778888888877777765443 444556788899999999999999988 44443333333322222211
Q ss_pred ----hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc
Q 008957 421 ----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 485 (547)
Q Consensus 421 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 485 (547)
..........++.+++.+...+.......+.. |+.++++.++.+...+..|.+.+| +.+.+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~ 360 (385)
T TIGR00710 294 ILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF-PHVAGTASALFGTLRLVLGAIVGY-LVSLIHG 360 (385)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-cccchHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 12223333344555555555555555556655 467999999998888776766655 4554444
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=6.3e-33 Score=274.33 Aligned_cols=365 Identities=10% Similarity=-0.005 Sum_probs=260.6
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh-----ccccHHHHHHHHHHh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-----SSFDFWSIAICRMLV 180 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-----~a~~~~~l~~~r~l~ 180 (547)
|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++.+ ..++++.+++.|++.
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 778888988999999999999999999999999999999999999999888887766543 257889999999999
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|||.|++.++..++..++.+ ..|+.
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 199 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPAL 199 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 99999888989999999999999999999999999999999999999998888999999998877665554443 33442
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
++.. ++++ +..++..+.++.++++|.++...+..+
T Consensus 200 ~~~~---~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (417)
T PRK10489 200 PPPP---QPRE------------------------------------------HPLRSLLAGFRFLLASPVVGGIALLGG 234 (417)
T ss_pred CCCC---cccc------------------------------------------cchHHHHHHHHHHHcChHHHHHHHHHH
Confidence 2110 0000 000011133455677777666555444
Q ss_pred HHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH
Q 008957 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (547)
+... ...+..+.|.|.++..+.+.... .+.....++.+++.++.+++.||.+++ +.+..+..+..+..++...
T Consensus 235 ~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 235 LLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred HHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHHHHHHHHc
Confidence 3332 34567788989888777765433 444566688888999999999886555 4444444444444444434
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHH
Q 008957 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 499 (547)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 499 (547)
.++.+...+..++.+++.+...+.......+..|++.||++.|+.+...+. |..+||.+.|++.+..| +...+...++
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l~~~~g-~~~~~~~~~~ 386 (417)
T PRK10489 309 MPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGLGAMMT-PVASASASGF 386 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHhc-hhhHHHHHHH
Confidence 455555555555666655555555566777888889999999999877776 88999999999999876 4456665555
Q ss_pred HHHHHHHHHHHHHhhcc-cccccchhhh
Q 008957 500 IFFLAAGIWFVGIFLKS-IDKFNEDGEN 526 (547)
Q Consensus 500 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 526 (547)
+.++..++... ..++ |+++.+|.++
T Consensus 387 ~~~~~~~~~~~--~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 387 GLLIIGVLLLL--VLGELRRFRQTPPEV 412 (417)
T ss_pred HHHHHHHHHHH--hcccccccccccccC
Confidence 54443333322 2333 4444444443
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.1e-33 Score=275.76 Aligned_cols=336 Identities=16% Similarity=0.103 Sum_probs=260.9
Q ss_pred ccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc-----cHHHHHHHHHH
Q 008957 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAICRML 179 (547)
Q Consensus 105 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-----~~~~l~~~r~l 179 (547)
+|.+..+++.+..+.+++.+++.++..++++++|+++||+|||++++.+.++.+++.++..+++ |++.+++.|++
T Consensus 22 ~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 101 (365)
T TIGR00900 22 LPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGI 101 (365)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 3778888999999999999999999999999999999999999999999999999998888877 99999999999
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
.|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++.++..++..+..++..++
T Consensus 102 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (365)
T TIGR00900 102 LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIP 181 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999998999999999887766655544443321
Q ss_pred ccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHH
Q 008957 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (547)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (547)
..+. +++++ . ++ +..++..+.++.++++|.++...+..
T Consensus 182 ~~~~---~~~~~-~----------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T TIGR00900 182 ELAA---SEIQA-L----------------------SN----------------AVLRDTREGIKFVLKNPLLRTLLLLA 219 (365)
T ss_pred cCCC---ccccc-c----------------------ch----------------hHHHHHHhHHHHHHcCcHHHHHHHHH
Confidence 1100 00000 0 00 00011123456677888888877777
Q ss_pred HHHHHHHHHHh-hhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH
Q 008957 340 IAYNFVIGAYS-YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 417 (547)
Q Consensus 340 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (547)
++......... .+.|.+.++..+.+.... .......++.+++.++.+++.||.+++ +.+..+..+....+...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~ 294 (365)
T TIGR00900 220 LLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFVIGLAILVV 294 (365)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHHHHHHHHHH
Confidence 77666666665 788888877666665443 444566778888899999999999887 55554444444444444
Q ss_pred HHhhh-HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 418 FCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 418 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
...++ .+...+..++.+++.+...+.......+.+|++.|+++.|+.+...+. +..++|.+.|++.|..|
T Consensus 295 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 295 GLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADHLG 365 (365)
T ss_pred HhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 33342 555566667777777777777788888989999999999999888887 88889999999988643
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.5e-33 Score=285.35 Aligned_cols=396 Identities=14% Similarity=0.156 Sum_probs=284.7
Q ss_pred hHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc
Q 008957 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (547)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~ 144 (547)
+.+..+++..++..+|....+. .+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 64 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNV-----------------AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF 64 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 4566777788888888887775 44999999999999999999999999999999999999999
Q ss_pred CCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhh
Q 008957 145 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYV 224 (547)
Q Consensus 145 Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 224 (547)
|||++++++.++.+++.+++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.
T Consensus 65 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 144 (485)
T TIGR00711 65 GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPT 144 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccc-------cccCCcCCCCCccccc-ccc
Q 008957 225 YGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS-------VSEGSEASNLNDHVSE-DIS 296 (547)
Q Consensus 225 l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~ 296 (547)
+++++.++.+||+.|++.++++++..++.++..|++++... ++.+...... ........+......+ ...
T Consensus 145 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (485)
T TIGR00711 145 LGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS--ENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEIL 222 (485)
T ss_pred cHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc--CCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 99999999999999999998888777777766665322110 0000000000 0000000000000000 000
Q ss_pred cchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhc
Q 008957 297 DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI 375 (547)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 375 (547)
.........-..........++...+ ..+++++.++...+..++..+..+...++.|.|+++..+.++... .......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~ 301 (485)
T TIGR00711 223 ILSITGLVAIIAFVVWELTDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVG 301 (485)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00000000000000000000000111 246788888888888888888888888899999998888776544 4445566
Q ss_pred ccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH-Hh---hhHHHHHHHHHHHHHHHhhcCccceeeeecc
Q 008957 376 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CL---SSLYGFLALFTVGELLVFATQAPVNYVCLHS 451 (547)
Q Consensus 376 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (547)
++.+++.++.|++.||+++| +.+..+..+......+.. .. .+.+.......+.+++.+...++......+.
T Consensus 302 ~~~~~~~~~~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~ 376 (485)
T TIGR00711 302 LAPMLSSPIAGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSG 376 (485)
T ss_pred HHHHHHHHHHHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88889999999999999998 555555544444444333 11 2334444455666677766666666677788
Q ss_pred cCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc
Q 008957 452 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 486 (547)
Q Consensus 452 ~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 486 (547)
.|++.++++.|+.+...+. |..+|+.+.+.+.++
T Consensus 377 ~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 377 LPPHKIARGSSLSNFTRQL-GGSIGTALITTILTN 410 (485)
T ss_pred CCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 8889999999999888777 888899999988874
No 45
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=5.2e-33 Score=279.68 Aligned_cols=385 Identities=12% Similarity=0.107 Sum_probs=271.4
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC
Q 008957 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN 145 (547)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G 145 (547)
.+..++++.+...++...++. .+|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 73 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNT-----------------ALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVG 73 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH-----------------HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445566667777777766653 448999999999999999999999999999999999999999
Q ss_pred CceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhh
Q 008957 146 PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 225 (547)
Q Consensus 146 rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 225 (547)
||++++.+.++.+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+
T Consensus 74 ~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 153 (471)
T PRK10504 74 VRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL 153 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcccccccccc------cc-CCcCCCCCccccccccc-
Q 008957 226 GGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV------SE-GSEASNLNDHVSEDISD- 297 (547)
Q Consensus 226 ~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~- 297 (547)
++.+.++.|||+.|++....+.+..++.....|+..... ++.+....... .. ..+..............
T Consensus 154 ~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (471)
T PRK10504 154 GGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQT---RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGL 230 (471)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccC---CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHH
Confidence 999999999999999998877776666666555432111 00000000000 00 00000000000000000
Q ss_pred ----------chhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh
Q 008957 298 ----------QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 367 (547)
Q Consensus 298 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 367 (547)
-..++... ++...+. +++++|.++...+..++..........+.|.|++...+.++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 298 (471)
T PRK10504 231 VAVGVVALLLYLLHARNN-----------NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH 298 (471)
T ss_pred HHHHHHHHHHHHHHHhcC-----------CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 00000000 0001122 4678999988888778777777777778888888766666544
Q ss_pred H-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhcCcc
Q 008957 368 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAP 443 (547)
Q Consensus 368 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 443 (547)
. .......++.+++.++.+++.||+++| +.+..+..+..+..++.... .+.+.......+.+++.+..++.
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 373 (471)
T PRK10504 299 AGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSS 373 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3 333444566677778899999999998 56655555444443333322 22222233344455566666666
Q ss_pred ceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 444 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 444 ~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
......+.+|++.++.+.|+.++.... |..+|+.+.|.+.+..|
T Consensus 374 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 374 MNTLTLKDLPDNLASSGNSLLSMIMQL-SMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHcCCHHhccchHHHHHHHHHH-HHHHHHHHHHHHHHHhh
Confidence 667777788889999999999877777 88899999999887654
No 46
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-32 Score=268.88 Aligned_cols=400 Identities=15% Similarity=0.109 Sum_probs=299.6
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHH-HHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~r~l~G~~~ 184 (547)
+.++++|+.+..+++|+.++....+.+..++.+.+.||||.|++.++|.++.++|.++.+|++++|++++ .-++.|+|.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999877 568889999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCC
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (547)
|..+.....++..||++| |+.+.|+...+.++|.++-|++..++.+.+|||+.+++.+.+.+-..+....+.|......
T Consensus 150 ~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~ 228 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK 228 (509)
T ss_pred hhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 999999999999888765 9999999999999999999999999999999999999999999888777777777544432
Q ss_pred CCCCccccccccccccCCcC-----CCCCccccc-ccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHH
Q 008957 265 APAESGKAQVVASVSEGSEA-----SNLNDHVSE-DISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 338 (547)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (547)
++.+++.............. ...+....+ ........++.+ ..+.. ....+....--.++++++.++...+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~d~~ll~~~~fl~~~~~ 306 (509)
T KOG2504|consen 229 PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGP-DKWRN-SPLQAFLSMLDLSLLKDPKFLLLALS 306 (509)
T ss_pred chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCC-ccccc-cchhhhhhhhhHHHHcCchHHHHHHH
Confidence 22000000000000000000 000000000 000000000000 00000 00000000112478899999999999
Q ss_pred HHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (547)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (547)
..+....+.....++|.|..+.+..+.....+.++.++..++++++.|++.|+...++. .+...+.+...+..+...
T Consensus 307 ~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~ll~~gl~~~~~p 383 (509)
T KOG2504|consen 307 NLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTLLIAGLARLFLP 383 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999655555555677788899999999999999999885421 344445555555555556
Q ss_pred HhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHH
Q 008957 419 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 498 (547)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 498 (547)
...+.+..+....+.+++.+........++.+.+..+.-+.+.|+...+..+ +..+||++.|++.|..++|...|++.+
T Consensus 384 ~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~tg~Y~~~f~~~g 462 (509)
T KOG2504|consen 384 FATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDITGNYDHAFYFCG 462 (509)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeeccCCeeeehhhcC
Confidence 6667777777777777777766666666788888889999999999777776 889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 008957 499 SIFFLAAGIWFVGI 512 (547)
Q Consensus 499 ~~~~~~~~~~~~~~ 512 (547)
++.+++..++++.+
T Consensus 463 ~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 463 LCFLLSAVLLLILR 476 (509)
T ss_pred hHHHHHHHHHHHhH
Confidence 99999888877666
No 47
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=4e-33 Score=282.72 Aligned_cols=400 Identities=12% Similarity=0.103 Sum_probs=259.3
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 141 (547)
.+|+.+..+++.++.+.++....+. .+|.+.+++|++..+.+++.+.+.+++.+++++.|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 79 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITL-----------------VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMG 79 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888888888887774 44889999999999999999999999999999999999
Q ss_pred hhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
||+|||++++.+.++.+++.++.++++|++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+
T Consensus 80 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (496)
T PRK03893 80 DRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV 159 (496)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhh
Q 008957 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (547)
Q Consensus 222 g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (547)
++.+++.+.++++||+.|++..+..++ .+......|+..+...+++++... .+..+........
T Consensus 160 ~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 223 (496)
T PRK03893 160 AAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPV---------------RTMVDILYRGEHR 223 (496)
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccc---------------hhHHHHHhcchhH
Confidence 999999999999999999875443332 222222234422110000000000 0000000000000
Q ss_pred hhcccccc-------hhhhhhhhhhhh-------------hh-H--hhcccchhHHHHHHHHHHHHHHHHHhhhccceeE
Q 008957 302 RSIKSIGE-------SRFLNQLSQFSQ-------------DT-K--VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 358 (547)
Q Consensus 302 ~~~~~~~~-------~~~~~~~~~~~~-------------~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 358 (547)
........ ..........+. .. . ...+.+.........+...........++|.|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 303 (496)
T PRK03893 224 IINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLK 303 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 00000000 000000000000 00 0 0000111111111111111112234567888887
Q ss_pred eeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHH
Q 008957 359 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGEL 435 (547)
Q Consensus 359 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 435 (547)
+..+.+.... .+.....++.+++.++.|++.||+++| +.+..+..+..+..++.... .+.+......++.++
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR-----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM 378 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 6667765443 455667788899999999999999998 55544444433333322222 222222222222222
Q ss_pred HHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHH
Q 008957 436 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 501 (547)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 501 (547)
......+....+..+.+|++.|++++|+.+...++ |..++|.+.|.+.|..| +...+...+.+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~ 442 (496)
T PRK03893 379 LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL-GGALAPILGALIAQRLD-LGTALASLSFSL 442 (496)
T ss_pred HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH-HHHHHHHHHHHHhccCC-hHHHHHHHHHHH
Confidence 33333444555667888889999999999877776 88899999999999876 656655544433
No 48
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=2.5e-32 Score=267.24 Aligned_cols=326 Identities=13% Similarity=0.095 Sum_probs=240.0
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
+.+.+++|++..+.|++.+.+.++..+.+++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.+
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCC
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (547)
...+...+++.|++|+++|++++++.....++|..+||++++++. .+|||+.|++.++..++..++..+..|+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~--- 190 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL--- 190 (400)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc---
Confidence 888999999999999999999999999999999999999999998 6899999999988877766655555554110
Q ss_pred CCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHH
Q 008957 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (547)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (547)
++... +..++++.++++|.++...+..+.....
T Consensus 191 ---~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (400)
T PRK11646 191 ---STVRT--------------------------------------------PVREGMTRVLRDKRFVTYVLTLTGYYML 223 (400)
T ss_pred ---cccch--------------------------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 00000 0012345667888877665555444444
Q ss_pred HHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeee-cccccchhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 008957 346 IGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILD-QMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 424 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (547)
......+.|.|.++.++.+.....+..+..++...+....+++.| |++.+ +.+..+..+..+..++....++.+
T Consensus 224 ~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~ 298 (400)
T PRK11646 224 AVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQ 298 (400)
T ss_pred HHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHH
Confidence 444556789888876664432223333333333333333344444 44433 333333333333333333444444
Q ss_pred HHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 425 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
...+...+.+.+.....+.......+..|++.||++.|+.+...+. |..+||.+.|++.|..+
T Consensus 299 ~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 299 QLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHh
Confidence 4444445555556666677777788888999999999999877777 88999999999998754
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=4e-32 Score=267.81 Aligned_cols=363 Identities=17% Similarity=0.201 Sum_probs=261.2
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC
Q 008957 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN 145 (547)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G 145 (547)
.+..+++.++...+++...+. ..|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~-----------------~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G 89 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDI-----------------LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLS 89 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 445555666666666655554 349999999999999999999999999999999999999999
Q ss_pred CceehHHHHHHHHHHHHhh---hccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhh
Q 008957 146 PFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (547)
Q Consensus 146 rr~~l~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (547)
||+++..+.++++++++++ +++++++.++++|+++|+|.+...+....++.|+.++++|.+.+++.+..+.+|..+|
T Consensus 90 ~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g 169 (438)
T PRK10133 90 YKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIA 169 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999885 5789999999999999999999999999999998877777778999999999999999
Q ss_pred hhhHHhhc-CC-------------------------CCchhHHHHHHHHHHHHHHHH-HhhccCccCCCCCCCccccccc
Q 008957 223 YVYGGVVG-SH-------------------------LNWRYAFWGEAILMLPFAVLA-FVIKPLQLKGFAPAESGKAQVV 275 (547)
Q Consensus 223 ~~l~~~l~-~~-------------------------~gwr~~f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~ 275 (547)
+.+++.+. .. .+||++|+....+..+..++. +...|+.+. ++++..
T Consensus 170 ~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~-- 242 (438)
T PRK10133 170 VVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDA-- 242 (438)
T ss_pred HHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccccc--
Confidence 99887543 00 246666664443333222222 222233110 000000
Q ss_pred cccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccc
Q 008957 276 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 355 (547)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 355 (547)
...+..++.+.++++|.++...+..+++.........|.+.
T Consensus 243 ---------------------------------------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 283 (438)
T PRK10133 243 ---------------------------------------KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIR 283 (438)
T ss_pred ---------------------------------------cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011133456788898887777777777777777778887
Q ss_pred ee-EeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 008957 356 AG-YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 433 (547)
Q Consensus 356 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (547)
|+ ++..+.++... .......++.++++++++++.||+++| +.+..+..+....+++....++. ..+..+.+.
T Consensus 284 ~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ 357 (438)
T PRK10133 284 YAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH-----KVLAAYALIAMALCLISAFAGGH-VGLIALTLC 357 (438)
T ss_pred HHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHH
Confidence 74 56677776544 445667788999999999999999998 55555555444444443333333 234566778
Q ss_pred HHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 434 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
+++.+..+|..+....+..++ ..+++.++.. .... |+.++|.+.|.+.|..|+.+..|++...+
T Consensus 358 glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~-g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 358 SAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTII-GGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred HHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHhc-cchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 888889999998888887654 4677777774 3334 77888999999999766445566544433
No 50
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=2.3e-33 Score=271.95 Aligned_cols=329 Identities=20% Similarity=0.291 Sum_probs=249.5
Q ss_pred ccc-ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 104 SGS-GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 104 ~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
.+| .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++..+++|++.+++.|++.|+
T Consensus 18 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 97 (352)
T PF07690_consen 18 ALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGI 97 (352)
T ss_dssp HHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccc
Confidence 337 7899999999999999999999999999999999999999999999999999997777777888899999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
+.+...+...+++.|++|+++|++++++.+.+.++|.+++|.+++.+.++.+||+.|++.+++.++..++..++.+++++
T Consensus 98 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~ 177 (352)
T PF07690_consen 98 GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPP 177 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---ST
T ss_pred ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998887765555544332
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHH
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (547)
....+++.+.. + +..++..+.++.+++++.+|...+..++.
T Consensus 178 ~~~~~~~~~~~-----------------------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T PF07690_consen 178 PRERESPKESE-----------------------------S----------KKPKPLKPGFKSLFKNPVLWILLIAFFLF 218 (352)
T ss_dssp TTT--SSTTTT-----------------------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHH
T ss_pred ccccccccccc-----------------------------c----------ccccccccccccccccchhhhhhhhhhHH
Confidence 22111111100 0 00001111245666777776555556666
Q ss_pred HHHHHHHhhhccceeEeeccCc-hhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH---
Q 008957 343 NFVIGAYSYWGPKAGYNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA--- 417 (547)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 417 (547)
.........+.|.|+.+..+.+ .... .+..+..+.++++.++.+++.||++++ +.............+..
T Consensus 219 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 293 (352)
T PF07690_consen 219 FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLILGALGLLLL 293 (352)
T ss_dssp HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHH
Confidence 6677778899999988888888 4333 445666778888899999999999986 33333222222222222
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCcc
Q 008957 418 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
...++.........+.+++.+...+.......+..|++.+|++.|+.+...++ |..+||
T Consensus 294 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP 352 (352)
T PF07690_consen 294 PFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP 352 (352)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence 22223455555666677778888888899999999999999999999887777 766665
No 51
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4.8e-33 Score=274.58 Aligned_cols=381 Identities=17% Similarity=0.226 Sum_probs=267.4
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh
Q 008957 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (547)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 142 (547)
.|+.+..+++.++...++....+. ..|.+.+++|.+..+.+++.+.+.++..++.++.|+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 77 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGF-----------------AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLAD 77 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----------------hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 345566666666666666655553 348899999999999999999999999999999999999
Q ss_pred hcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhh
Q 008957 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (547)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (547)
|+|||++++.+.++.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..++
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 157 (398)
T TIGR00895 78 RIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVG 157 (398)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccc-cccccccCCcCCCCCcccccccccchhh
Q 008957 223 YVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ-VVASVSEGSEASNLNDHVSEDISDQASE 301 (547)
Q Consensus 223 ~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (547)
+.+++++.+..|||+.|++.++..++..++.+++.|++++...++++++.. ..++....... +..+...+
T Consensus 158 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---- 228 (398)
T TIGR00895 158 GFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQA-----EAQSALPE---- 228 (398)
T ss_pred HHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccc-----cccccccc----
Confidence 999999999999999999998777777777666677654321111100000 00000000000 00000000
Q ss_pred hhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-Hhhhhhhcccccc
Q 008957 302 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIV 380 (547)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 380 (547)
+..+. +..++..+..+...+.+..+...+..++..........+.|.+.++ .+.+... ........++.++
T Consensus 229 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 300 (398)
T TIGR00895 229 QKATQ-------GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVI 300 (398)
T ss_pred ccccc-------chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 00000 0001111111111122333444444555556666677788855443 4555433 3445666788899
Q ss_pred cceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHH
Q 008957 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 460 (547)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 460 (547)
+.++.+++.||+++| ..............++.....+.+...+..++.+++.+...+.......+.+|++.|+++
T Consensus 301 ~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 375 (398)
T TIGR00895 301 GSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATG 375 (398)
T ss_pred HHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 999999999999987 344333333333333333234555556666777777777778888888999999999999
Q ss_pred HHHHHHHHHhhcCCCccchhhhh
Q 008957 461 MAISTVSIHIFGDVPSSPLVGVL 483 (547)
Q Consensus 461 ~g~~~~~~~~~g~~~~~~~~g~l 483 (547)
.|+.+...++ |..++|.+.|++
T Consensus 376 ~g~~~~~~~~-g~~~g~~~~G~l 397 (398)
T TIGR00895 376 VGWAIGIGRL-GAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHH-HHHHHHHhHHhc
Confidence 9999888777 888899888875
No 52
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=100.00 E-value=6e-31 Score=268.55 Aligned_cols=360 Identities=20% Similarity=0.318 Sum_probs=264.6
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc---------------
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--------------- 168 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--------------- 168 (547)
+++.++++|+++..+.|++.+.+.++++++.++.|+++||+|||+++.+++++++++++++++.+
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 45999999999999999999999999999999999999999999999999999999999988753
Q ss_pred ------------------------------------cHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHH
Q 008957 169 ------------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY 212 (547)
Q Consensus 169 ------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 212 (547)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++++
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 24567899999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhHHhhcCCC----------------------CchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcc
Q 008957 213 MCIPTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 270 (547)
Q Consensus 213 ~~~~~G~~~g~~l~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 270 (547)
.+..+|.++|+++++++.+.+ +|+..|++.+++.++.++..++ .|+..+......+.
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~-~p~~lp~~~~~~~~ 293 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF-FPKALPKEGKRVNV 293 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh-CccccCCcccccch
Confidence 999999999999999887532 2777898888888877765544 44432211000000
Q ss_pred ccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHh
Q 008957 271 KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS 350 (547)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (547)
+.. +++. .+... ...+.......++++..++.++++|.++...+..++.....+++.
T Consensus 294 ~~~-~~~~----------------~~~~~------~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~ 350 (633)
T TIGR00805 294 DVH-ETEK----------------LEKSE------DKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYI 350 (633)
T ss_pred hhh-hhhc----------------ccccc------cccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000 00000 000000001223445677889999999999999999999999999
Q ss_pred hhccceeEeeccCchhhH-hhhhhhcc-cccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH-----------
Q 008957 351 YWGPKAGYNIYHMSNADM-MFGGVTIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA----------- 417 (547)
Q Consensus 351 ~~~p~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 417 (547)
+|+|.|+++.++.++... .+..+..+ +.+++.+++|+++||++.+.....+..+...++........
T Consensus 351 ~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~a 430 (633)
T TIGR00805 351 TFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVA 430 (633)
T ss_pred HHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccc
Confidence 999999999888886554 33333333 56789999999999999764322222222222222111100
Q ss_pred ---------------H-H-------------------------------------------h------------------
Q 008957 418 ---------------F-C-------------------------------------------L------------------ 420 (547)
Q Consensus 418 ---------------~-~-------------------------------------------~------------------ 420 (547)
. . .
T Consensus 431 gv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C 510 (633)
T TIGR00805 431 GVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLC 510 (633)
T ss_pred eeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCC
Confidence 0 0 0
Q ss_pred ----hh-HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 421 ----SS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 421 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
.+ ...+++++++..+..+....+.+.++...+|+++|+.+.|+...+.+++|.+-+|+++|++.|..
T Consensus 511 ~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 511 NPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred CcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 00 12334444455555667778888899999999999999999999999999999999999999854
No 53
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=5.6e-32 Score=267.55 Aligned_cols=350 Identities=13% Similarity=0.125 Sum_probs=255.7
Q ss_pred cccccccccccCccc-----hhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHH
Q 008957 104 SGSGIQGDFKLNNFQ-----DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 178 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 178 (547)
.+|.+.+++|++..+ .|++.+++.++..++++++|+++||+|||++++.+.++.+++.+++.++++++.+++.|+
T Consensus 36 ~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (408)
T PRK09874 36 FLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRA 115 (408)
T ss_pred hHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 448888999988665 488999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
+.|++.+ ..+....++.+++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..+++.|
T Consensus 116 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 116 LLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999865 567778889999999999999999999999999999999999998899999999999888777776666665
Q ss_pred CccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHH-HH
Q 008957 259 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VL 337 (547)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 337 (547)
+..+.. ++++. .. .++....++++.++.. ..
T Consensus 195 ~~~~~~---~~~~~-----------------------------------------~~----~~~~~~~~~~~~~~~~~~~ 226 (408)
T PRK09874 195 ENFQPV---SKKEM-----------------------------------------LH----MREVVTSLKNPKLVLSLFV 226 (408)
T ss_pred cCcccc---cchhh-----------------------------------------hH----HHHHHHhCcCCchHHHHHH
Confidence 532110 00000 00 0111233455555442 22
Q ss_pred HHHHHHHHHHHHhhhccceeEeeccCchh-h---HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH
Q 008957 338 GYIAYNFVIGAYSYWGPKAGYNIYHMSNA-D---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (547)
Q Consensus 338 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (547)
..+........+..+.|.|..+..+.... . ..+..+..++.+++.++.|++.||+++| +.+..+..+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~ 301 (408)
T PRK09874 227 TTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHH
Confidence 23333333444445566666554332221 1 1223445567778888889999999998 5555555544444
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHH
Q 008957 414 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 493 (547)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 493 (547)
.+.....++.+...+...+.+++.+...+.......+..+++.+++..++.+...+. |..+||.+.|.+.+..| |+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~~~G~l~~~~g-~~~~ 379 (408)
T PRK09874 302 LIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPLMGAAISANYG-FRAV 379 (408)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHHHHHHHHhhcc-hhHH
Confidence 444444445555555556666766666666666667777889999999998877777 88999999999998865 8888
Q ss_pred HHHHHHHHHHHHHHHH
Q 008957 494 TLALTSIFFLAAGIWF 509 (547)
Q Consensus 494 ~~~~~~~~~~~~~~~~ 509 (547)
|.+.+++.+++.+...
T Consensus 380 f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 380 FLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888877776655544
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.98 E-value=1.3e-31 Score=263.04 Aligned_cols=351 Identities=13% Similarity=0.152 Sum_probs=249.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh---c-cccHHHHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-a~~~~~l~~~r~l~G 181 (547)
+.+.+|+|.++.+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++++++. + .++++.+++.|++.|
T Consensus 37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G 116 (402)
T TIGR00897 37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRG 116 (402)
T ss_pred HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH
Confidence 556688999999999999999999999999999999999999999999999999877652 3 358888999999999
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhh-hhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
++.+...+...+.+.+++|+++|++++|+.+.+.++|. ++++++++++.+..||+..++......++..++.+++.++.
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (402)
T TIGR00897 117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDI 196 (402)
T ss_pred cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99988888888889999999999999999999999997 58999999999888977666655444444344444443332
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
++ +++++.. + +.++..+.++.++++|.++...+..+
T Consensus 197 ~~----~~~~~~~-------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T TIGR00897 197 FT----PQHMQTR-------------------E---------------------KFSELGKAATILFTNPNVLLGGMVRI 232 (402)
T ss_pred CC----cccccCC-------------------c---------------------chhhHHHHHHHHHcChhHHHHHHHHH
Confidence 11 0000000 0 00001123556788999988888777
Q ss_pred HHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH-
Q 008957 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF- 418 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 418 (547)
+.....+.+.++.|.|.++ .+.+.... .......++++++.++.|+++||++||+. ......+...+..+...
T Consensus 233 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~----~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT----VRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH----HHHHHHHHHHHHHHHHHH
Confidence 7777788888899998866 56665443 44455678889999999999999998732 11111111111111111
Q ss_pred H----hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHH
Q 008957 419 C----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 494 (547)
Q Consensus 419 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 494 (547)
. .++.+...+..++.+++.+... +..... .+.+|++|+++.|+.+...++ |..++|.+.|.+.|..| +...+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~-~~~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~g-~~~~~ 383 (402)
T TIGR00897 308 IPQHFGHSFAVALIIAIALGIFLAGYV-PLAAVF-PTLAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFFG-AIGVV 383 (402)
T ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHH-HHHHHH-HhhCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hHHHH
Confidence 1 1233444445555555554432 233333 346678999999999888887 88889999999999876 65777
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 495 LALTSIFFLAAGIWF 509 (547)
Q Consensus 495 ~~~~~~~~~~~~~~~ 509 (547)
++.+++.+++.++..
T Consensus 384 ~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 384 WIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777666555544
No 55
>PRK12382 putative transporter; Provisional
Probab=99.98 E-value=8e-32 Score=264.44 Aligned_cols=341 Identities=14% Similarity=0.066 Sum_probs=237.5
Q ss_pred cccc-cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh---hc-----cccHHHHH
Q 008957 104 SGSG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GS-----SFDFWSIA 174 (547)
Q Consensus 104 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-----a~~~~~l~ 174 (547)
.+|. +.+|+|+|..++|++.+++.+++.++++++|+++||+||||+++.+.+...++.+.. ++ .+|++.++
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 3454 678999999999999999999999999999999999999999999988877765432 22 35789999
Q ss_pred HHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||++++++.+..|||+.+.+..+..++.... .
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~ 195 (392)
T PRK12382 117 VGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-N 195 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999889999999999999999999999999999999999999998899998877665443322211 1
Q ss_pred hhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHH
Q 008957 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (547)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (547)
...|+.+ +++++. ...+ +..+.+.+ +.+
T Consensus 196 ~~~~~~~-----~~~~~~-----------------------------------------~~~~---~~~~~~~~-~~~-- 223 (392)
T PRK12382 196 GTVRKVP-----AHAGER-----------------------------------------PSLW---SVVGLIWK-PGL-- 223 (392)
T ss_pred HhccCCC-----CCcccC-----------------------------------------chHH---HHHHHHHH-hHH--
Confidence 1112100 000000 0000 11111111 111
Q ss_pred HHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHH
Q 008957 335 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 414 (547)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 414 (547)
..++..........+.|.|+++. +.+... .......++.+++.++.|++.||+++| +.+..+..+..+..
T Consensus 224 ---~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~ 293 (392)
T PRK12382 224 ---GLALQGVGFAVIGTFVSLYFASK-GWAMAG-FTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGL 293 (392)
T ss_pred ---HHHHHHHHHhHHHHHHHHHHHhc-CCchhH-HHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHH
Confidence 11222233334455556666543 333222 223344566778889999999999988 44444444444444
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHH
Q 008957 415 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 494 (547)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 494 (547)
++....++.+...+...+.+++.+...+.......+..+++.|+++.|+.+...+. |..++|.+.|++.|+.| |+..+
T Consensus 294 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~ 371 (392)
T PRK12382 294 LLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAGMLATSFG-YPSVF 371 (392)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-chHHH
Confidence 44444455555555556666666666666666777888889999999999887777 88889999999999876 88888
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 495 LALTSIFFLAAGIWF 509 (547)
Q Consensus 495 ~~~~~~~~~~~~~~~ 509 (547)
.+.+.+.+++.++..
T Consensus 372 ~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 372 LAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888877666655444
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.98 E-value=1e-31 Score=262.67 Aligned_cols=345 Identities=11% Similarity=0.070 Sum_probs=247.2
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehH-HHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
.+++++|.+..+.|++.+++.++..+.+++.|+++||+||||.++ .+.++..++.+++++++|++.+++.|++.|.+.+
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 102 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAS 102 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhh
Confidence 467899999999999999999999999999999999999998765 4566667788888999999999999999998888
Q ss_pred hhhhcccccccccCCCCCcchh--hhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 186 SFISLAAPFIDDNAPVPQKTAW--LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
...|...+++.|+.|+++|++. .++...+.++|.++|+++++.+.+..|||+.|++.++..++..++.+++.||.++.
T Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 103 TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 8888888889999887777754 57888889999999999999999889999999999988887777777766763321
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
.. ++.+ . .+.+..++++.++...+..++..
T Consensus 183 ~~--~~~~-~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 212 (375)
T TIGR00899 183 AP--GALT-R-----------------------------------------------LEVRGLLASRDTRLLFVACTLMW 212 (375)
T ss_pred cc--cccC-c-----------------------------------------------chhhhhhcCcchHHHHHHHHHHH
Confidence 10 0000 0 01122345555555544444444
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (547)
........+.|.++++..+.++... ..........+++.++.|++.||+++| +.+...........+.....++
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 287 (375)
T TIGR00899 213 GCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYTGLAADNS 287 (375)
T ss_pred HHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556677888776666665433 233333455667778899999999998 4554444443333333333445
Q ss_pred HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHH
Q 008957 423 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 502 (547)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 502 (547)
.+...+...+.+++.+...+.......+.. |++++++.++.+...+. |..++|.+.|.+.+..| |+..+.+.+++.+
T Consensus 288 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~ 364 (375)
T TIGR00899 288 LWALLMLQLLNAIFIGILAGIGMLYFQDLM-PGRAGAATTLYTNTGRV-GWIIAGSVGGILAERWS-YHAVYWFAIVMLI 364 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcc-chhHHHHHHHHHH
Confidence 555555555555555555554444555544 55677999999888776 88999999999998765 7778887777766
Q ss_pred HHHHHHH
Q 008957 503 LAAGIWF 509 (547)
Q Consensus 503 ~~~~~~~ 509 (547)
++.++..
T Consensus 365 ~~~~~~~ 371 (375)
T TIGR00899 365 VALFCLL 371 (375)
T ss_pred HHHHHHh
Confidence 6555543
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.98 E-value=2.2e-31 Score=261.35 Aligned_cols=325 Identities=15% Similarity=0.079 Sum_probs=231.0
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++
T Consensus 25 ~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 25 GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIG 104 (392)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++.+++..++.++..||+++.
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999999999988888999999999988888777776666653211
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
. +++.. . ..+..++.++++.++...+...+..
T Consensus 185 ~----~~~~~----------------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (392)
T PRK10473 185 R----APAAS----------------------------------------S----KPRENSESLLNRFFLSRLVITTLSV 216 (392)
T ss_pred c----cCCcc----------------------------------------c----hHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 0 00000 0 0012234556676665554444444
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (547)
.....+..+.|.+.++..+.+.... .......++.+++.++.+++.||+++| +.+..+..+.....+......+
T Consensus 217 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 217 TVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555667777766667665443 344556778889999999999999998 5555554444444433333333
Q ss_pred HHHHHHHHHHHHHHHhhcCccceeeeecccCCcch-hHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 423 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
.+.......+...+.+..++.... .+..|.+.| +.+.++. .. +..+++.+.+++.+..|
T Consensus 292 ~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~g~~~~~~----~~-~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 292 HAVSLFGITLICAGFSVGFGVAMS--QALGPFSLRAGVASSTL----GI-AQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH--HHhccCcccccHHHHHH----HH-HHHHHHHHHHHHHHHhc
Confidence 333333333333333333222221 222233333 3333332 23 44556777778877665
No 58
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.98 E-value=1.2e-31 Score=261.72 Aligned_cols=356 Identities=16% Similarity=0.176 Sum_probs=249.0
Q ss_pred HHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCC
Q 008957 67 LVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP 146 (547)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr 146 (547)
+..++++.++...+...+.. .+|.+.+++|.|..++|++.+.+.+++.+++++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-----------------~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~ 70 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNT-----------------LVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGF 70 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHH-----------------HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 44455555556566555553 5599999999999999999999999999999999999999999
Q ss_pred ceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhH
Q 008957 147 FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 226 (547)
Q Consensus 147 r~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 226 (547)
|+++..+.++.+++.+++++++|++.++++|+++|++.+...+.....+.+..++++|+++++++..+.++|..+|+.++
T Consensus 71 k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 150 (381)
T PRK03633 71 NRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLV 150 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888888888999999999999999999999999999999
Q ss_pred HhhcCCCCchhHHHHHHHHHHHHHHHHHhhc-cCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcc
Q 008957 227 GVVGSHLNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIK 305 (547)
Q Consensus 227 ~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (547)
+.+.+...|...+. .+...... +..++.. ++. . +++ +..
T Consensus 151 ~~l~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~--~---~~~-~~~-------------------------------- 190 (381)
T PRK03633 151 SKVSTELMSVLPWV-TGLVLAAI-LPLLFTRILNQ--Q---AEN-HDS-------------------------------- 190 (381)
T ss_pred hcccccccchHHHH-HHHHHHHH-HHHHHhcccCC--C---CCC-CCC--------------------------------
Confidence 99876543433332 22222211 1112211 110 0 000 000
Q ss_pred cccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-Hhhhhhhccccccccee
Q 008957 306 SIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTIS 384 (547)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 384 (547)
.+.++.+++|.++......+...........++|.|.++. +.+... ........++.+++.++
T Consensus 191 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~ 254 (381)
T PRK03633 191 ---------------TSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQWP 254 (381)
T ss_pred ---------------CCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 1123455666666554444444444555667788888764 454433 34445666788899999
Q ss_pred eeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHH
Q 008957 385 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 464 (547)
Q Consensus 385 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~ 464 (547)
.|++.||+++| +.+..+..+..+.++... .. ........+.+.+.....+.......+..+++.++...+..
T Consensus 255 ~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 326 (381)
T PRK03633 255 IGRLADRFGRL-----LVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQAL 326 (381)
T ss_pred hHHHHHHcCcH-----HHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 99999999998 555444444333333222 11 11222333344444445566666677777777777777777
Q ss_pred HHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHH
Q 008957 465 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 505 (547)
Q Consensus 465 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 505 (547)
+...++ |.++||.+.|++.|+.+ +...|.+.+.+.++..
T Consensus 327 ~~~~~l-G~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 327 LLSYTV-GSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHH
Confidence 666666 88999999999999876 6677777666655443
No 59
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.7e-31 Score=260.95 Aligned_cols=360 Identities=16% Similarity=0.152 Sum_probs=267.6
Q ss_pred HHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCC
Q 008957 67 LVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP 146 (547)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr 146 (547)
+.++++.++...+.....+ |.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+||
T Consensus 5 ~~~~~~~f~~~G~~~~~~~-----------------~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~ 67 (410)
T TIGR00885 5 FALITSLFALWGFANDITN-----------------PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY 67 (410)
T ss_pred HHHHHHHHHHHHHHHHhHH-----------------HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3445555555555555544 35599999999999999999999999999999999999999999
Q ss_pred ceehHHHHHHHHHHHHhhhc---cccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhh
Q 008957 147 FRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (547)
Q Consensus 147 r~~l~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (547)
|++++++.++++++.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+|+
T Consensus 68 r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~ 147 (410)
T TIGR00885 68 KAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGM 147 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988643 468999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcCC--------------------------CCchhHHHHHHHHHHHHHHHHHhh-ccCccCCCCCCCcccccccc
Q 008957 224 VYGGVVGSH--------------------------LNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVA 276 (547)
Q Consensus 224 ~l~~~l~~~--------------------------~gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~ 276 (547)
.+++.+... .+||++|++.+++.++..++..+. .|+.+. +++++ .
T Consensus 148 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~----~~~~~-~--- 219 (410)
T TIGR00885 148 VVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH----SDAKQ-I--- 219 (410)
T ss_pred HHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----ccccc-c---
Confidence 998877422 369999999998777665544332 122100 00000 0
Q ss_pred ccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccce
Q 008957 277 SVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKA 356 (547)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (547)
+...+.+.++++|.++...+..+++.........+++.|
T Consensus 220 -----------------------------------------~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y 258 (410)
T TIGR00885 220 -----------------------------------------SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQY 258 (410)
T ss_pred -----------------------------------------cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000123456788888888888888877777778888888
Q ss_pred eEeec-cCchh-hHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 008957 357 GYNIY-HMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGE 434 (547)
Q Consensus 357 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (547)
.++.. +.+.. ..........+..+|+++++++.||+++| +.+......+.+.+++....++.. ....+.+.+
T Consensus 259 ~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-----~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~g 332 (410)
T TIGR00885 259 AVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-----KVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCS 332 (410)
T ss_pred HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence 86533 22221 12233444567789999999999999988 666666666666666655554433 356666777
Q ss_pred HHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc-----chhHHHHHHHHHHH
Q 008957 435 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-----NNWRKTTLALTSIF 501 (547)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-----~~~~~~~~~~~~~~ 501 (547)
++.+..+|.++....+..+++.+..+.++... .+|+.+.|++.|++.|.. |+++..|++...+.
T Consensus 333 lf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~---~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 333 AFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA---IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH---HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 88888889889888888877655445555432 258899999999999954 34666666544443
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.7e-31 Score=261.18 Aligned_cols=331 Identities=17% Similarity=0.171 Sum_probs=243.8
Q ss_pred CccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 008957 100 GICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (547)
Q Consensus 100 ~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (547)
.+.|.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 88 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFL 88 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 45578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999988899999999988888777766666665
Q ss_pred ccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHH
Q 008957 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (547)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (547)
..+.. ++++ . ..++..++++..++++.++...+..
T Consensus 169 ~~~~~---~~~~-~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T PRK11102 169 TLPKE---RRQP-F-----------------------------------------HLRTTIRNFASLFRHKRVLGYMLAS 203 (377)
T ss_pred cCccc---ccCC-C-----------------------------------------ChHHHHHHHHHHHcChHHHHHHHHH
Confidence 32110 0000 0 0000113455677888877776666
Q ss_pred HHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHH---H
Q 008957 340 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC---L 415 (547)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~---~ 415 (547)
++.......+..+.|.++.+..+.++... .......++.+++.++.+++.||+++| +.+..+..+..... .
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~ 278 (377)
T PRK11102 204 GFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHH
Confidence 66666666777777877777667665443 444566788889999999999999998 44444333222211 1
Q ss_pred HHHHh-hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhh
Q 008957 416 TAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (547)
Q Consensus 416 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g 481 (547)
..... .+.+...+...+...+.+...........+. .|+.++++.++.+.....+|..+++.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 279 VSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDE-FPHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcc-ccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 1233333333333333333333333344444 45889999999877666556666665433
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=5.1e-31 Score=257.33 Aligned_cols=353 Identities=14% Similarity=0.094 Sum_probs=246.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
+.+.+|++.+..+.+++.+++.+++.++.+++|+++||+|||++++++.+++++++++++++.+. ++.|+++|++.+
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999999999999888777664 789999999999
Q ss_pred hhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCC
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (547)
...|...+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+...++. ++..+..||.+...+
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~ 181 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRP 181 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCccccc
Confidence 99999999999999999999999999999999999999999999875 4777777766554333 333444555321100
Q ss_pred CCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHH
Q 008957 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (547)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (547)
+.+ .+.. ...++..+.++.++++|.+........+....
T Consensus 182 ~~~-~~~~----------------------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 220 (393)
T PRK11195 182 GQS-WNPI----------------------------------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGA 220 (393)
T ss_pred ccC-CCHH----------------------------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 000 0000 00111223345667777766555444444444
Q ss_pred HHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 008957 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 424 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (547)
.....+..|.++++.++.++... .......++.+++.++.+++.||.+++ +.+..+..++ ...+.....++.+
T Consensus 221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~-~~~~~~~~~~~~~ 294 (393)
T PRK11195 221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMG-LVVLLMALQHSLL 294 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHH-HHHHHHHHHhHHH
Confidence 44455555666666667765444 444566678888889999988887766 3444433332 2222222334445
Q ss_pred HHHHHHHHHHHHHhhcCccceeeeecccCCcc-hhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHH
Q 008957 425 GFLALFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 503 (547)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 503 (547)
......++.+++.+...++......+..|++. +|++.++.+...+. +..++..+.+.+ +..| .+..+.+.+...++
T Consensus 295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 371 (393)
T PRK11195 295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLV 371 (393)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHH
Confidence 45555556667766666667777666544444 79999999888877 778888888766 4444 55666666666666
Q ss_pred HHHHHHHHHh
Q 008957 504 AAGIWFVGIF 513 (547)
Q Consensus 504 ~~~~~~~~~~ 513 (547)
...+.+.+++
T Consensus 372 ~~~~~~~~~~ 381 (393)
T PRK11195 372 ALAMALLWRW 381 (393)
T ss_pred HHHHHHHHHH
Confidence 6666655543
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=9.1e-31 Score=257.16 Aligned_cols=329 Identities=12% Similarity=0.076 Sum_probs=239.5
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
|.+|.+.+++|+++.+.+++.+.+.+++.++++++|+++||+|||++++++.++..++.+++.++++++.+++.|++.|+
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 108 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGL 108 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 35589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
+.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+.+..|||+.|++.++..++..++..+..||.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99988888888999999999999999999999999999999999999988999999999988877766666556565321
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHH
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (547)
.. ++.. +..+.++..+++|.++...+..+..
T Consensus 189 ~~-----~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK11652 189 AD-----ARRT--------------------------------------------RVLASYRTLLSNRRFNCYLLMLIGT 219 (394)
T ss_pred cc-----cchh--------------------------------------------HHHHHHHHHHcChHHHHHHHHHHHH
Confidence 10 0000 0113456677888777666555555
Q ss_pred HHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH--
Q 008957 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-- 419 (547)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 419 (547)
......+..+.+.++++..+.+.... .+.....++.+++.++.+++.||.+++. ........+..........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 295 (394)
T PRK11652 220 LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM----WQSVICCLLAGLLMWIPGWFG 295 (394)
T ss_pred HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhc
Confidence 55555556667777777666665433 3333444555666666666666665321 1111222222222111111
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc
Q 008957 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 486 (547)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 486 (547)
..+.+......++.+++.+...+.......+.. |+.++++.++.+....+ |..+++.+.+.+.+.
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 296 VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPF-PYLAGTAGALLGGLQNI-GSGLAALLSAMLPQT 360 (394)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 123344455556666666666676776666655 46789999999877776 878888888877654
No 63
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1.2e-30 Score=256.82 Aligned_cols=328 Identities=19% Similarity=0.137 Sum_probs=238.5
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
|.+|.+.+++|.++.+.+++.+++.+++.++++++|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|+
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 106 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAV 106 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 56688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
+.+...+...+++.|+++++++++..+.......+|..++|.+++++.++.|||+.|++.+++.++..+..+++.|+.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (401)
T PRK11043 107 GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKK- 185 (401)
T ss_pred hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCC-
Confidence 9988888888899999999999999999999999999999999999999999999999998888777666554433211
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHH
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (547)
++++ . + ...+++++++++.++...+...+.
T Consensus 186 -----~~~~-~----------------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~ 215 (401)
T PRK11043 186 -----ARKQ-S----------------------------------------Q----DALTFKQLLKSKTYLGNVLIFAAC 215 (401)
T ss_pred -----cccc-c----------------------------------------h----HHHHHHHHHcChhHHHHHHHHHHH
Confidence 0000 0 0 002345667777777655555555
Q ss_pred HHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH--
Q 008957 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-- 419 (547)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 419 (547)
......+..+.|.+.++ .+.+.... .......++.+++.++.+++.||+++|+.. ........++.........
T Consensus 216 ~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 216 SAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 55556667778887765 45664433 223344566777888888999999887321 1111111122111111111
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc
Q 008957 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 486 (547)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 486 (547)
.++.+...+...+.+++.+..++.......+.. |+.++++.|+.+..... +...++.+.|.+.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 293 HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALIST 357 (401)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 123333444445555666666665555555544 56899999999887666 556678888888774
No 64
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=2e-30 Score=253.31 Aligned_cols=337 Identities=15% Similarity=0.083 Sum_probs=242.6
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
+.+.+++|++..+.|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.++++|++.|.+.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 55778899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCC
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (547)
...+...++..|..|+++|++++++.....++|.++||++++++.+ .+||+.|++.++..++..++..+..|+..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~-- 188 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA-- 188 (395)
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc--
Confidence 8888899999999999999999999999999999999999999875 6999999999888777666655555542211
Q ss_pred CCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHH
Q 008957 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (547)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (547)
++++.. +. .+.++.+++|.++...+..++..+.
T Consensus 189 --~~~~~~----------------------------------------~~-----~~~~~~~~~~~~~~~~~~~~l~~~~ 221 (395)
T PRK10054 189 --IATETG----------------------------------------SV-----WSPSVLLQDKALLWFTCSGFLASFV 221 (395)
T ss_pred --cccchh----------------------------------------hh-----hhhhhhccCceehHHHHHHHHHHHH
Confidence 000000 00 1124567888888777766666555
Q ss_pred HHHHhhhccceeEeec--cCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH-hh
Q 008957 346 IGAYSYWGPKAGYNIY--HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LS 421 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 421 (547)
...+..+.+.|..... +.+.... .+.....+..+......+++.||.++| +.+..+..+.....+.... .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~ 296 (395)
T PRK10054 222 SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVGFIFSGN 296 (395)
T ss_pred HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHHHHHcch
Confidence 5544445555543222 2222222 233334445555556677888988887 4554444444333333322 23
Q ss_pred hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
+.+...+...+.+++.....+.....+.+..|++.+++..+..+ ..+. |..+||.+.|.+.|+.| +...+++.+.+
T Consensus 297 ~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~ 372 (395)
T PRK10054 297 SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVILTTLP-PWSLFVILALA 372 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHHHHHcC-hhhHHHHHHHH
Confidence 44444555556666655555655666777788889999988764 4455 88999999999999886 44555554444
No 65
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.9e-30 Score=248.37 Aligned_cols=390 Identities=14% Similarity=0.120 Sum_probs=259.7
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc---cccHHHHHHHHHHhhhhhhhhhhcccccc
Q 008957 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEASFISLAAPFI 195 (547)
Q Consensus 119 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~~~~~~~~~~~~~i 195 (547)
.+.+.+++.+|.++|++..|.++||+|||..++++.++..++.++..+ ++++++++++|++.|+..|......+.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 577889999999999999999999999999999999888887777654 57899999999999999999999999999
Q ss_pred cccCCCCCcchhhhHHHHhhhhhhhhhhhhHH--hhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccc
Q 008957 196 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 273 (547)
Q Consensus 196 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 273 (547)
.|..|++.||....+.+.+..+|.+++..++. .+.+...|++.+....+++++..++..+ .||+++..-..+.++..
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~-~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPF-LPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-CCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999977764 3445667999999999888776665544 47777654321111111
Q ss_pred cccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHH-----HHHHHHHHHHHHH
Q 008957 274 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-----VLGYIAYNFVIGA 348 (547)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 348 (547)
.++.. +..+..++++++.++..++.+.++..+ +...+++++++++..+.- ++.......+.+.
T Consensus 221 A~~sl-~~y~G~~~~~~~~e~~~~e~~~~~~~~-----------~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~a 288 (485)
T KOG0569|consen 221 ARKAL-KFYRGKEDVEAEIEEMLREIEEEELEK-----------KKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINA 288 (485)
T ss_pred HHHHH-HHHhCCCcchhHHHHHHHHHHHhcccc-----------ccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcce
Confidence 11111 111111111111111111111111110 011345566666554442 2333333344556
Q ss_pred HhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh----hhH-
Q 008957 349 YSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL- 423 (547)
Q Consensus 349 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 423 (547)
..+|...++++.+-....+.......++..++..+++.+++||.||| ++++.+..++.+..+++... +..
T Consensus 289 i~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~~ 363 (485)
T KOG0569|consen 289 IFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSFG 363 (485)
T ss_pred eHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66676667766553333444566677788999999999999999999 67776666655554443322 111
Q ss_pred -H---HHHHHHHHHHHHHhhcCcccee-eeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHH
Q 008957 424 -Y---GFLALFTVGELLVFATQAPVNY-VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 498 (547)
Q Consensus 424 -~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 498 (547)
| ..++..++..+..+.+..++.. +..|.+|++.|+.+.++.....+. ..++-...+..+.+..|. ..|+.+.
T Consensus 364 ~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~--~~filF~ 440 (485)
T KOG0569|consen 364 SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGP--YVFILFV 440 (485)
T ss_pred hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--hhhHHHH
Confidence 1 2344555555566666555544 456667779999999999888888 556567788888888885 3455554
Q ss_pred HHHHHHHHHHHHHHhhcc-cccccchhhhhhccc
Q 008957 499 SIFFLAAGIWFVGIFLKS-IDKFNEDGENQISLD 531 (547)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 531 (547)
+..++ ...+.++++|| |+|+.+|+.++.++.
T Consensus 441 i~~~~--~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 441 IPLAI--FLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHH--HHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 44333 33334457788 778888877766544
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=1.6e-30 Score=252.11 Aligned_cols=326 Identities=22% Similarity=0.312 Sum_probs=277.0
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
..|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++..++++++.+++.|++.|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 100 (352)
T cd06174 21 ALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLG 100 (352)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcc
Confidence 44788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
.+...+...+++.|++|+++|++.+++.+....+|..+++.+++.+.+..+||+.|++.+++.++..+...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 174 (352)
T cd06174 101 GGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL------ 174 (352)
T ss_pred cccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 99999999999999999999999999999999999999999999999888999999999888777666554431
Q ss_pred CCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
|.++...+..++..
T Consensus 175 ------------------------------------------------------------------~~~~~~~~~~~~~~ 188 (352)
T cd06174 175 ------------------------------------------------------------------RLLLLLALAFFLLS 188 (352)
T ss_pred ------------------------------------------------------------------HHHHHHHHHHHHHH
Confidence 34555566677777
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHH-HHHHHHHHHHHHHHHHHHhh
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLTAFCLS 421 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 421 (547)
........+.|.+..+..+.+.... .......++.+++.++.+++.||+++| + .+..+..+..+..+.....+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 189 FGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHhc
Confidence 7778888888888887656665443 455667788899999999999999998 5 66666666666666655556
Q ss_pred hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHH
Q 008957 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 501 (547)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 501 (547)
+.+...+...+.+++.+...+.......+..|+++|++..|+.+...+. |..++|.+.|.+.+..+ ++..+.+.+++.
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~ 341 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLLDTGG-YGGVFLILAALA 341 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccC-cchHHHHHHHHH
Confidence 6666777778888888888888888999999889999999999888777 88899999999998754 778888887777
Q ss_pred HHHHHHH
Q 008957 502 FLAAGIW 508 (547)
Q Consensus 502 ~~~~~~~ 508 (547)
+++.+..
T Consensus 342 ~i~~i~~ 348 (352)
T cd06174 342 LLAALLL 348 (352)
T ss_pred HHHHHHh
Confidence 6665544
No 67
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=1.2e-30 Score=252.37 Aligned_cols=330 Identities=14% Similarity=0.049 Sum_probs=239.7
Q ss_pred cccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhh
Q 008957 102 CTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (547)
Q Consensus 102 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (547)
.|.+|.+.+++|++.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|++.|
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 357799999999999999999999999999999999999999999999999999998888887 7889999999999999
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC--CchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
++.+...+....++.|+++ ++|++++++++.+.++|..+++.+++.+.++. +||+.|.+.++..++..+ ...|+
T Consensus 99 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~ 174 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIPQ 174 (355)
T ss_pred HHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhhh
Confidence 9999988888889999986 57999999999999999999999998887654 399999887765443322 22233
Q ss_pred ccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHH
Q 008957 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (547)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (547)
.++. +++++.. . ....++++|+|.++...+..
T Consensus 175 ~~~~---~~~~~~~-------------------------------~--------------~~~~~~~~~~~~~~~~~~~~ 206 (355)
T TIGR00896 175 VRRR---VAANQTT-------------------------------T--------------RLTPVRIWRSPLAWQVTVFF 206 (355)
T ss_pred hccc---cCCCCCC-------------------------------C--------------CCCCchhhcCHhHHHHHHHH
Confidence 2111 0000000 0 01123456778887776666
Q ss_pred HHHHHHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 340 IAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (547)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (547)
++....++....|+|.|+++. +.+... ....++..++.++++++.|++.||+++|+ ..+.....+..+..+...
T Consensus 207 ~~~~~~~~~~~~~lp~~~~~~-g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 207 GLQSGLYYSLIGWLPAILISH-GASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHHHHH
Confidence 666677777888999998764 555433 34556778889999999999999995542 344444333333333333
Q ss_pred HhhhHHHHHHHHHHHHHHHhhcCccceeeeecccC-CcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhH
Q 008957 419 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 491 (547)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 491 (547)
...+..... ...+.+++.+..++.......+..+ ++.++...++.+...+. +.+++|.+.|++.|+.|+|.
T Consensus 282 ~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 282 FAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccC
Confidence 322222222 3345566665555554444444444 46778888888776676 77789999999999888764
No 68
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=3.4e-30 Score=250.94 Aligned_cols=324 Identities=16% Similarity=0.118 Sum_probs=228.3
Q ss_pred cccc-cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc-cHHHHHHHHHHhh
Q 008957 104 SGSG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVG 181 (547)
Q Consensus 104 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~G 181 (547)
.+|. +++++|+++.+.+++.+++.+++.++++++|+++||+|||+.++++.++..++.+++++++ +++.+++.|+++|
T Consensus 23 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 102 (366)
T TIGR00886 23 LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG 102 (366)
T ss_pred hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4474 8999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC----------CCCchhHH-HHHHHHHHHHH
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAILMLPFA 250 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f-~~~~~~~~~~~ 250 (547)
++.+. .+....+++|++|+++|++++++.....++|..+++.+++.+.. +.+||+.| +..++...+..
T Consensus 103 ~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 103 IAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPA 181 (366)
T ss_pred Hhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHH
Confidence 98664 56678899999999999999999998888888888777765543 34899999 44466555555
Q ss_pred HHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccc
Q 008957 251 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 330 (547)
Q Consensus 251 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (547)
++.+...++.++..+++++.+.. . .... . .+ ...+..++.+++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~------------~----~~~~----~----~~------------~~~~~~~~~~~~~ 225 (366)
T TIGR00886 182 LLIFFVGADTPPGKPATGKLSFK------------G----ARWS----V----GT------------GALGDQLKVFRDR 225 (366)
T ss_pred HHHHHhcccCCcccccchhcccc------------c----cccc----c----cc------------hhHHHHHHHHhcc
Confidence 55555555533211000000000 0 0000 0 00 0001334567788
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHH
Q 008957 331 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 409 (547)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 409 (547)
.++...+..++.......+..+.|.|+++.++.+.... .+..+..++++++.+++|++.||+++| +.+......
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~ 300 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSFLG 300 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHHHH
Confidence 88887777777777777888889999988777775444 345566778889999999999999997 333332222
Q ss_pred HHHHH-HHHHHhh---hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHh
Q 008957 410 GAISC-LTAFCLS---SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (547)
Q Consensus 410 ~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (547)
..... ++..... +.+...+...+...+.+...+.......+.. ++++|++.|+.+...+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 301 VAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF-RRATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc-hhhcccHHHHHHHhccC
Confidence 22222 2222222 3444444444555555555565665555544 57999999998776655
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=7.6e-31 Score=258.49 Aligned_cols=343 Identities=14% Similarity=0.077 Sum_probs=237.2
Q ss_pred cccccccc--cCccchhHHHHH-----HHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHH-------
Q 008957 106 SGIQGDFK--LNNFQDGVLSSA-----FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW------- 171 (547)
Q Consensus 106 ~~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~------- 171 (547)
+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||++++.+.++..++.++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T TIGR00883 17 VLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAP 96 (394)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHH
Confidence 55555543 445666665443 3334457899999999999999999999999999999999999876
Q ss_pred -HHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc--------CCCCchhHHHHH
Q 008957 172 -SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGE 242 (547)
Q Consensus 172 -~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~ 242 (547)
.++++|+++|++.+...+....++.|++++++|++..++.+.+..+|.++++.++..+. +.++||+.|++.
T Consensus 97 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 176 (394)
T TIGR00883 97 ILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVS 176 (394)
T ss_pred HHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999998876653 357899999988
Q ss_pred HHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhh
Q 008957 243 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 322 (547)
Q Consensus 243 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (547)
+++.++..++ ....||+++...++++++ .. ..+
T Consensus 177 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------------------------------~~--------------~~~ 209 (394)
T TIGR00883 177 AVLVLIGLYL-RRNLEETPVFEKAQEKHK--------------------------------KK--------------RGP 209 (394)
T ss_pred HHHHHHHHHH-HHhcCCChhHHHHHhccc--------------------------------cc--------------cCC
Confidence 7665543332 223343221100000000 00 011
Q ss_pred hHhhcccch--hHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhH
Q 008957 323 TKVLLQEKV--YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 399 (547)
Q Consensus 323 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 399 (547)
.++.++++. ++......++.....+....+.|.|.++..+.+.... .......++.+++.++.|++.||++||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~---- 285 (394)
T TIGR00883 210 IRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR---- 285 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH----
Confidence 233344433 5655666666666677778889998876666664433 444556678888899999999999998
Q ss_pred HHHHHHHHHHHHHHH--HHHHH--hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCC
Q 008957 400 FKLLSAATFLGAISC--LTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (547)
Q Consensus 400 ~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (547)
+.+.....+..... +.... .++.+......++.+++.+...++......+.+|++.|+++.++.+...+.+|..+
T Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~ 364 (394)
T TIGR00883 286 -PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGF 364 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhH
Confidence 44433322222211 11111 13344444555566666667777788888898999999999998655555558888
Q ss_pred ccchhhhhhcccchhHHHHHHHHHH
Q 008957 476 SSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 476 ~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
+|.+.|++.|+.|.+...++..+++
T Consensus 365 ~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 365 APYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHHHHHHHHcCcchhHHHHHHHH
Confidence 9999999999877565555544443
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=1.5e-29 Score=247.75 Aligned_cols=344 Identities=10% Similarity=0.069 Sum_probs=225.1
Q ss_pred cccccccccCccchhHHHHHHHH-HHhhhhhhhhhhhhhcCCceeh-HHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
+.+.+++|++.+++|++.+...+ ++.++.+++++ +||+||||.+ +.+.++.+++.++.+++++++.+++.+.+.|..
T Consensus 40 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 40 IFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 45788999999999999876655 66666666565 9999999875 556666678888888999999887666555544
Q ss_pred hhhhhhcccccccccCCCCCcc--hhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 184 EASFISLAAPFIDDNAPVPQKT--AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~--~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
.+...|...+++.|+.++++|. ...++.+.+.++|.++||++++.+.+++|||+.|++.++.+++.++..++..||.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 5567888888888888766553 44578888999999999999999998899999999999888887777777667642
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (547)
+..+ +.++.. +..+. +++..+........
T Consensus 199 ~~~~--~~~~~~-----------------------------------------------~~~~~--~~~~~~~~~~~~~~ 227 (393)
T PRK15011 199 KELP--LATGTL-----------------------------------------------EAPRR--NRRDTLLLFVICTL 227 (393)
T ss_pred CCCc--cccccc-----------------------------------------------ccccc--ccccHHHHHHHHHH
Confidence 2110 000000 00000 01112222222333
Q ss_pred HHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 008957 342 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (547)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (547)
.......+..+.|.|+++..+.+.... .+.....++.+++.++.|+++||+++| +.+..+.......+......
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMA 302 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHH
Confidence 334444556678888877777775443 333444566778889999999999998 44443333333333222233
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
++.+..++...+.+++.+...+.......+.. |+.++++.++.+...++ |..++|.+.|.+.|..| |+..+.+.+++
T Consensus 303 ~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~~~~~~~~~~~l-g~~~g~~l~G~i~~~~g-~~~~~~~~~~~ 379 (393)
T PRK15011 303 HSPAILLGLQLLNAIYIGILGGIGMLYFQDLM-PGQAGSATTLYTNTSRV-GWIIAGSLAGIVAEIWN-YHAVFWFALVM 379 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-hHHHHHHHHHH
Confidence 44443333333333333333233333344444 45699999998877776 88999999999999765 77777766666
Q ss_pred HHHHHHHHH
Q 008957 501 FFLAAGIWF 509 (547)
Q Consensus 501 ~~~~~~~~~ 509 (547)
.+++.+..+
T Consensus 380 ~~~~~~~~~ 388 (393)
T PRK15011 380 IIATLFCLL 388 (393)
T ss_pred HHHHHHHHH
Confidence 555444443
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=6.8e-30 Score=249.15 Aligned_cols=343 Identities=12% Similarity=-0.003 Sum_probs=256.8
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceeh----HHHHHHHHHHHHhhhccccHHHHHHHHH
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAICRM 178 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 178 (547)
|.+|.+.+++|+|..++|++.+++.+...++++++|+++||+|||+.. ..+..+..+ ..+.++++++.+++.|+
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~ 102 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIG 102 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHH
Confidence 455888999999999999999999999999999999999999985432 222222222 24446889999999999
Q ss_pred HhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
++|.+.+...|...++..++ +++|++..+......++|.+++|++++.+.+++|||+.|++.++... ..++.+...|
T Consensus 103 l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~ 179 (382)
T TIGR00902 103 LFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKP 179 (382)
T ss_pred HHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCC
Confidence 99999888888888887665 46799999999999999999999999999999999999998765532 2223333323
Q ss_pred CccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHH
Q 008957 259 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 338 (547)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (547)
+.++.. +++++.. +..++.++++|+|.++...+.
T Consensus 180 ~~~~~~--~~~~~~~--------------------------------------------~~~~~~~~~l~~~~~~~~l~~ 213 (382)
T TIGR00902 180 TIPPKD--AIPEDES--------------------------------------------QGDSAFIALLKNPMNLRFLAA 213 (382)
T ss_pred CCCCCc--ccccccc--------------------------------------------ccchhHHHHHcChHHHHHHHH
Confidence 211110 0000000 001235678899999998888
Q ss_pred HHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH
Q 008957 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 417 (547)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (547)
.++.......+..+.|.|+++ .+.+.... ....+..++.+++.++.+++.||++.| +.+..+.+...+...+.
T Consensus 214 ~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~~~~ 287 (382)
T TIGR00902 214 VCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRWAII 287 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHHHHH
Confidence 888888888888899999877 56665333 344456677888888888999999988 67777777776666666
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHH
Q 008957 418 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 497 (547)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 497 (547)
...++.+..+....+-++..+...+....++.+. |++.++++.++++.....+|.+++|.+.|++.|+.| + ..|.+.
T Consensus 288 ~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~ 364 (382)
T TIGR00902 288 GAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFM 364 (382)
T ss_pred HhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHH
Confidence 6677777777778888888888877777777776 888999999998755555588999999999999986 4 566666
Q ss_pred HHHHHHHH
Q 008957 498 TSIFFLAA 505 (547)
Q Consensus 498 ~~~~~~~~ 505 (547)
+++.+++.
T Consensus 365 ~~~~~~~~ 372 (382)
T TIGR00902 365 AIIAAAAF 372 (382)
T ss_pred HHHHHHHH
Confidence 66655443
No 72
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=6.1e-30 Score=226.94 Aligned_cols=417 Identities=13% Similarity=0.085 Sum_probs=281.9
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 141 (547)
..|.........+..+.+.....+. ..|.+...+|.+..|..++......|..+++..+|.++
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~-----------------i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~ 137 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSL-----------------ILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSA 137 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHH-----------------HHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheeh
Confidence 3455666666666666554444443 22778889999999999999999999999999999999
Q ss_pred hhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
|++|||+.+.+..+..++...+.+.++|+..++++|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++
T Consensus 138 d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ 215 (528)
T KOG0253|consen 138 DTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVF 215 (528)
T ss_pred hhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 898999999999999999887777 999999999
Q ss_pred hhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCC-CCCccccccccccccCCcCCCCCc-ccccccccch
Q 008957 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA-PAESGKAQVVASVSEGSEASNLND-HVSEDISDQA 299 (547)
Q Consensus 222 g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 299 (547)
...++-....++||||.....+.+..+.+.+.+ ..||+++... +.++.+.....++..+.++..... ......++++
T Consensus 216 ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~-w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~ 294 (528)
T KOG0253|consen 216 EALLAWGVMSNFGWRYLLFTSSTPLMFAARFLV-WVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQ 294 (528)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHh-hcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhh
Confidence 999999889999999999999877666555544 4467665432 223333332222222222211110 0000111111
Q ss_pred hhhhcccccchhhhhhhhhhhhhhHhhccc---chhHHHHHHHHHHHHHHHHHhhhccc-----------------eeEe
Q 008957 300 SERSIKSIGESRFLNQLSQFSQDTKVLLQE---KVYVVNVLGYIAYNFVIGAYSYWGPK-----------------AGYN 359 (547)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~-----------------~~~~ 359 (547)
+++... ..+.+.+..++...+..+++.. ++.+.....++...+.+++....... +.+.
T Consensus 295 e~e~~~--~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~ 372 (528)
T KOG0253|consen 295 EQEESD--LDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELET 372 (528)
T ss_pred hhhhhc--hhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHh
Confidence 110000 0000000001111222333321 22222223333333444443322222 2221
Q ss_pred ecc---CchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 008957 360 IYH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 436 (547)
Q Consensus 360 ~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (547)
..+ .+...+.-..+..+..++|.++.++++||+||| +.+....++..++.+++....+......+.+..-++
T Consensus 373 ~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~araf 447 (528)
T KOG0253|consen 373 RANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF 447 (528)
T ss_pred hhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH
Confidence 100 111112222445688899999999999999999 777777777777777777776777777788888889
Q ss_pred HhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 437 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
..+.+...+.+..|.+|+..|+++.|.+..+..+ |+++.|++. ...+. . ...+..+++.+++++.++..
T Consensus 448 isg~fqvaYvYtPEVyPTavRatgvGtcSsmaRI-ggI~~p~iA-~~~e~-s-~sl~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 448 ISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARI-GGIFSPVIA-MRAEL-S-TSLPIFVYGALFILAGIAVC 516 (528)
T ss_pred HhchheEEEEecCcccchhhhhcchhhhhhHHhh-hhhhhhHHH-HHhcc-c-eeehHHHHHHHHHHHHHHhe
Confidence 9999999999999999999999999999877777 989999777 43332 2 22566677777776666655
No 73
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.6e-29 Score=253.58 Aligned_cols=391 Identities=15% Similarity=0.146 Sum_probs=258.4
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhccccccc
Q 008957 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID 196 (547)
Q Consensus 117 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 196 (547)
.+.+|+.+.+.++..++++++|+++|++|||+.++++.+++.+|.+++++++|+++++++|+++|+|.|......+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 34599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-CCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccc
Q 008957 197 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 275 (547)
Q Consensus 197 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 275 (547)
|..|++.||...+..+....+|..++..++....+. .+||..+.+..+++++..+. .++.||++++..+..+.+...
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~- 246 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAK- 246 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHH-
Confidence 999999999999999999999999996666555433 58999999999999988888 777788776543321111110
Q ss_pred cccccCCcC--CCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhc----ccchhHHHHHHHHHHHHHHHHH
Q 008957 276 ASVSEGSEA--SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL----QEKVYVVNVLGYIAYNFVIGAY 349 (547)
Q Consensus 276 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 349 (547)
........ .....++.+.++.....+.... . ++ ..+++++ +++.+....+..+.+..+....
T Consensus 247 -~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~--~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~ 314 (513)
T KOG0254|consen 247 -RSLKRLRGLSPEDVEVELELLKIKLLVEAEVA--E-------GK--ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYV 314 (513)
T ss_pred -HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcc--c-------cc--ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceE
Confidence 00000111 1111111111110000000000 0 00 0112222 2233444455555555666777
Q ss_pred hhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh---------
Q 008957 350 SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--------- 420 (547)
Q Consensus 350 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 420 (547)
.+|.+.+++..+..+.. .....+.++..+++.+++.++.||+||| ++++.+.....++.++....
T Consensus 315 ~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~ 388 (513)
T KOG0254|consen 315 FYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPN 388 (513)
T ss_pred EeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCC
Confidence 78888888776665443 3344555677777777889999999999 66666555555444433321
Q ss_pred ---hhHHHHHHHHHHHHHHHhhcCccceeee-ecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHH
Q 008957 421 ---SSLYGFLALFTVGELLVFATQAPVNYVC-LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 496 (547)
Q Consensus 421 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 496 (547)
...+..++..++........+.++.+.+ .|.+|.+.|+.+.++...+.+.....+ ......+.+..+ ....|..
T Consensus 389 ~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~ 466 (513)
T KOG0254|consen 389 SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGY 466 (513)
T ss_pred cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHH
Confidence 1123445555566666667777777755 555556999999999988888855554 334444444322 1234555
Q ss_pred HHHHHHHHHHHHHHHHhhcc-cccccchhhhhhcc
Q 008957 497 LTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQISL 530 (547)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 530 (547)
++.+..+.... ++....|| |+++.|+.++...+
T Consensus 467 f~~~~~~~~~~-fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 467 FGGICLLSLII-FVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHHHHHH-HheEEcccCCCCcHHHHHHHHHc
Confidence 44444443332 22335566 88888887775544
No 74
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=2.8e-29 Score=251.13 Aligned_cols=352 Identities=13% Similarity=0.101 Sum_probs=246.3
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-----CCcee-hHHHHHHHHHHHHhhhcc---ccHHHHH
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIA 174 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~a---~~~~~l~ 174 (547)
.+|...++.|.+.+++|.+ +.....+ ++.+++|+++||+ |||+. ++.+.++.+++.++.++. ++++.+.
T Consensus 34 ~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~ 111 (491)
T PRK11010 34 TLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLA 111 (491)
T ss_pred HHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence 3377788889999899987 4444444 6899999999999 99985 667777777777777664 4788899
Q ss_pred HHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC-CCCchhHHHHHHHHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA 253 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~ 253 (547)
+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..|||..|++.+++.++..+..
T Consensus 112 ~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 112 ALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988 5799999999998877665554
Q ss_pred HhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhH
Q 008957 254 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 333 (547)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (547)
++ .||++... ++++.. + ++...+++++++++..+
T Consensus 192 ~~-~~e~~~~~---~~~~~~-------------------------------~-----------~~~~~~l~~~~~~~~~~ 225 (491)
T PRK11010 192 LL-APEPTDTI---PVPKTL-------------------------------E-----------QAVVAPLRDFFGRNNAW 225 (491)
T ss_pred Hh-cCCCcccc---ccccch-------------------------------h-----------hhHHHHHHHHHcCcCHH
Confidence 44 45532110 000000 0 00013355666777766
Q ss_pred HHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhh-h-hhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHH
Q 008957 334 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-G-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 411 (547)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 411 (547)
...+..+++.........+.+.|+.+..+.+...... . ....++.+++.+++|++.||+++| +.+....++..
T Consensus 226 ~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~~l~~ 300 (491)
T PRK11010 226 LILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----RALMIFGILQG 300 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHH
Confidence 6655555555555556667777776666777655433 2 344578899999999999999987 44433332222
Q ss_pred HHH---HHHHHh-hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 412 ISC---LTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 412 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
+.. ...... ++.+...+..++..++.+...+.......+..+++.+++..|+.+...++ |..+++.+.|++.|..
T Consensus 301 l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~l-g~~~~~~~~G~l~~~~ 379 (491)
T PRK11010 301 VSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAV-GRVYVGPVAGWFVEAH 379 (491)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 211 111111 23333333333333333334444566667777888899999999888777 7777777999999987
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 008957 488 NNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
| |...|.+.+++.+.+.++...
T Consensus 380 G-~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 380 G-WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred C-hHHHHHHHHHHHHHHHHHHHH
Confidence 6 878888888777776665553
No 75
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=5.7e-29 Score=223.91 Aligned_cols=348 Identities=15% Similarity=0.066 Sum_probs=256.1
Q ss_pred ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhh
Q 008957 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (547)
Q Consensus 109 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~ 188 (547)
..+.+-+++++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++++..+++++++..+++.++++|.+||+|.+...
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 34556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccCCCC-CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCC
Q 008957 189 SLAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 267 (547)
Q Consensus 189 ~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 267 (547)
+++.++++|.+|++ +|++++|+...+.++|.++||++||++.+..|.+.+|++.++++++-..+.+++++.+....+
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~-- 255 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD-- 255 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--
Confidence 99999999999975 589999999999999999999999999999999999999999999999998888743221110
Q ss_pred CccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHH
Q 008957 268 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 347 (547)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (547)
+..+. .++..++++|..+.........+....
T Consensus 256 ~~~~~------------------------------------------------~~~~~Ll~dP~I~~~agai~~~n~~la 287 (464)
T KOG3764|consen 256 STEQG------------------------------------------------TPMWSLLMDPYILLIAGAITFSNSSLA 287 (464)
T ss_pred ccccC------------------------------------------------ccHHHHHhCchHhhhhcchhhccchHH
Confidence 00000 235678889988877666555555444
Q ss_pred HHhhhccceeEeeccCchhhHhhh-hhhcccccccceeeeeeeecccccchhHHHHH-HHHHHHHHHHHHHHHHhhhHHH
Q 008957 348 AYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLL-SAATFLGAISCLTAFCLSSLYG 425 (547)
Q Consensus 348 ~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 425 (547)
...-.++.++.+....+.....+. ....+...++..+.|.+.||+++.+ +.+ ..+.++....+......++...
T Consensus 288 fLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~----wl~~~~gl~~~G~~~~~iP~~~~~~~ 363 (464)
T KOG3764|consen 288 FLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR----WLLSLGGLATVGVSSGPIPFATSIAQ 363 (464)
T ss_pred HhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh----HHHHHHHHHHHHHHhchhHhhhhHHH
Confidence 444444454555444333233333 3345778899999999999999542 233 3333333333333344444433
Q ss_pred HHHH---HHHHHHHHhhcCccceeeeecccCCc---chhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHH
Q 008957 426 FLAL---FTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 499 (547)
Q Consensus 426 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 499 (547)
.++. .++.+........+......+....+ .-|...++......+ |.++||.++|.+.+..| +.+...+.+.
T Consensus 364 L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~ 441 (464)
T KOG3764|consen 364 LWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGI 441 (464)
T ss_pred HhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHH
Confidence 3333 33333333344444444444443334 678899998766666 99999999999999987 7777777777
Q ss_pred HHHHHHHHHHHHH
Q 008957 500 IFFLAAGIWFVGI 512 (547)
Q Consensus 500 ~~~~~~~~~~~~~ 512 (547)
..++..-++...+
T Consensus 442 ~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 442 LNLIYAPVLLLLR 454 (464)
T ss_pred HHHHHHHHHHHHH
Confidence 7666555555444
No 76
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=9.3e-29 Score=232.77 Aligned_cols=353 Identities=9% Similarity=0.020 Sum_probs=237.7
Q ss_pred ccccccccccCccc-hhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 105 GSGIQGDFKLNNFQ-DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 105 ~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.|.+.+|+|+|..| .|.+.++++.+|+++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGva 128 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVT 128 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHH--HHHHHHHHHHHHhhccCcc
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE--AILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~--~~~~~~~~~~~~~~~p~~~ 261 (547)
.|... +...++..|+|+++|+++.++..++..+|.++++++++++. .+|||+-+.+. ...+..+++++.+++|...
T Consensus 129 EA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~ 206 (511)
T TIGR00806 129 MAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALFLKRPK 206 (511)
T ss_pred HHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 99999 99999999999999999999999999999999999999954 67999766544 2333445555556666433
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (547)
+..--.+++... .....+.+.. ..+...+. .+..+.......+..+.+++...+++.+..-.+-+.+
T Consensus 207 ~sl~f~~~~~~~--~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~ 273 (511)
T TIGR00806 207 RSLFFNRLEDVR--GALPCELDQM----------VPGPGGKL-EDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVF 273 (511)
T ss_pred hhhhhccccccc--cccccccccC----------CCCCcccc-chhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHH
Confidence 321100000000 0000000000 00000000 0000011113345667788888888888777777766
Q ss_pred HHHHHHHHhhhccceeEeeccCch-hhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 008957 342 YNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (547)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (547)
...+++-+.+|....-.+.....+ .....-++..+.+.+..+..|++-.++.+.. ...+.+..++.....+++...
T Consensus 274 a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~---~l~l~v~s~~~~gll~~m~~t 350 (511)
T TIGR00806 274 NSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS---KLLIAVVSAIQAGLVFWMSQS 350 (511)
T ss_pred HhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH---HHHHHHHHHHHHHHhhhhhcc
Confidence 666666666555443333222111 1112223333445556667777644443210 023334444555555666667
Q ss_pred hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCC
Q 008957 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (547)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (547)
++.|...+...++........+....-++.....+.-|-..|+.+.+.-.+-.++
T Consensus 351 ~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtil 405 (511)
T TIGR00806 351 HDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTII 405 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHhe
Confidence 7888888888888888887777777777777777777888888765554434333
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=7.5e-29 Score=275.30 Aligned_cols=345 Identities=14% Similarity=0.016 Sum_probs=245.7
Q ss_pred ccccccccCc-cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHH---HHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 107 GIQGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 107 ~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
.+..+.+.+. ...++..+++.+.++++++++|+++||+|||+++.. ..++..+..+.....+|+++++++|+++|+
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi 120 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGI 120 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444444433 447888999999999999999999999999997533 223333333333445899999999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
+.+...|+..+++.+++++++|++++++.+++.++|.++||++++++....+|++.|+..++..++ +++..+..|+...
T Consensus 121 ~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 199 (1140)
T PRK06814 121 HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGN 199 (1140)
T ss_pred HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999554444443 3444444444221
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHH
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (547)
... ..+.+. ...++....++.+.+++.++...+..++.
T Consensus 200 ~~~-~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1140)
T PRK06814 200 AAP-DLKIDR-----------------------------------------NIIRSTITLLKYAKADKRIWLAILGISWF 237 (1140)
T ss_pred CCC-CCeecc-----------------------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 100 000000 00011224567788999999988888888
Q ss_pred HHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH-HHHH-
Q 008957 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAFC- 419 (547)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 419 (547)
++....+..++|.|+++.++.+.... .+.+...++.++|.++.|++.++..+++ .+..+.++..+..+ +...
T Consensus 238 ~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~ 312 (1140)
T PRK06814 238 WLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL-----YVPIGALLMGLFGLDLAFAS 312 (1140)
T ss_pred HHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee-----eehHHHHHHHHHHHHHHhcc
Confidence 88888888899999988877775443 4456777888999999999998766652 22222222111111 1110
Q ss_pred ------------------hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhh
Q 008957 420 ------------------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (547)
Q Consensus 420 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g 481 (547)
..+.+..++..++.+++.+...++..+++.+..|++.+|+++|+.+..... |..+++.+.|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g 391 (1140)
T PRK06814 313 SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILA 391 (1140)
T ss_pred cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHH
Confidence 134455556666677777777778888899999999999999999887776 7788998988
Q ss_pred hhhcccchhHHHHHHHHHH
Q 008957 482 VLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~~ 500 (547)
.+.+...++...+++.+.+
T Consensus 392 ~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 392 LLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHhccCHHHHHHHHHHH
Confidence 8876444454555444443
No 78
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=3.4e-29 Score=229.44 Aligned_cols=425 Identities=15% Similarity=0.130 Sum_probs=278.0
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCcccccccccccc--------ccCccchhHHHHHHHHHHhhhhh
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDF--------KLNNFQDGVLSSAFMVGLLVASP 135 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~ 135 (547)
.+.+.+...+++.+.+|...++.. .|-+...+ +.++...+.+..+..+|.++|++
T Consensus 40 fk~i~iAG~GfftDsYDlF~I~lV-----------------t~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl 102 (538)
T KOG0252|consen 40 FKAIIIAGMGFFTDSYDLFSISLV-----------------TKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQL 102 (538)
T ss_pred HHHHHHhhhhhcccchhhhhHHHH-----------------HHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHH
Confidence 345666677788888998888752 13333322 24556678999999999999999
Q ss_pred hhhhhhhhcCCceehHHHHHHHHHHHHhhhccc-------cHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhh
Q 008957 136 IFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 208 (547)
Q Consensus 136 ~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 208 (547)
++|+++||+|||+++...+++..+++++++++. -.+++...|++.|+|.|+.+|.+.+..+|...++.||..+
T Consensus 103 ~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~i 182 (538)
T KOG0252|consen 103 FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFI 182 (538)
T ss_pred HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcccccee
Confidence 999999999999999999999999999888753 2567899999999999999999999999999999999999
Q ss_pred hHHHHhhhhhhhhhhhhHHhhcC-------------C--CCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccc
Q 008957 209 SMFYMCIPTGVALGYVYGGVVGS-------------H--LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 273 (547)
Q Consensus 209 ~~~~~~~~~G~~~g~~l~~~l~~-------------~--~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 273 (547)
+.+.+..+.|.+.|.+++-.+.. + .=||..|.+.+++.+.+....+ .+||+.+.....+++...
T Consensus 183 aavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~ 261 (538)
T KOG0252|consen 183 AAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQ 261 (538)
T ss_pred EEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhh
Confidence 99999999999988887765431 1 1399999998887765444333 236655443111100000
Q ss_pred cccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 008957 274 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 353 (547)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (547)
..++..+..+. .++++... +....+..+..+.+..-+... .-+.+......++..-..++....+.
T Consensus 262 a~~d~~k~~~~---------~~~~~~~~----~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~ 327 (538)
T KOG0252|consen 262 AAGDMKKVLSV---------DIEAESTA----ESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQ 327 (538)
T ss_pred hhhcccccccc---------ccchhhcc----ccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHH
Confidence 00000000000 00000000 000000001111121212111 22455556667777777777777777
Q ss_pred cceeEeeccCchhh--------H-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh--
Q 008957 354 PKAGYNIYHMSNAD--------M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-- 422 (547)
Q Consensus 354 p~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 422 (547)
..++++.+-.+... . .-..+...+.++|..+...++|++||+ +..+.+.++..+..+.+....+
T Consensus 328 s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~~~~~y~~~ 402 (538)
T KOG0252|consen 328 SVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFVIAGPYNQL 402 (538)
T ss_pred HHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHHHcCCcccc
Confidence 66666433222111 1 112344466777999999999999999 6666666666666555443322
Q ss_pred --HHHHHHHHHHHHHHHhhcCccceeee-ecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc-----ccchhHHHH
Q 008957 423 --LYGFLALFTVGELLVFATQAPVNYVC-LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTT 494 (547)
Q Consensus 423 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~~~~~~~~ 494 (547)
.....++..+..++....-.....++ ++.+|.+.|++..|+....... |++++...++++.+ ..+ .+..+
T Consensus 403 ~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~-GAivg~~~F~~~t~~~yp~~~g-~~~v~ 480 (538)
T KOG0252|consen 403 ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKA-GAIVGAFGFLYLTDHNYPPNIG-VRNVF 480 (538)
T ss_pred cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccc-hHHHHHHHhhHhhhccCCcccc-chHHH
Confidence 33455666666666665544444444 4555669999999999655555 99999999999888 443 67888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc-cccccchhhhhhcc
Q 008957 495 LALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQISL 530 (547)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 530 (547)
++++.+.+++.+..+ .+|| +++.+++++++.+.
T Consensus 481 ~i~~~~~~~gi~~T~---l~pEtk~~~leei~~e~~~ 514 (538)
T KOG0252|consen 481 IILAGCMLLGILFTL---LIPETKGKSLEEISNEEES 514 (538)
T ss_pred HHHHHHHHHhHheeE---EeecccccCHHHhcChhhc
Confidence 888888877777666 4455 77888777655443
No 79
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.8e-28 Score=222.68 Aligned_cols=329 Identities=17% Similarity=0.155 Sum_probs=269.6
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh---ccccHHHHHHHHHHh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLV 180 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~~l~~~r~l~ 180 (547)
.+|.+++.|++|..|.+++..+++.|+.+++++.|++.+|+|+|+.+++|+.++++++.+.. ...+|..++++-++.
T Consensus 35 Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFil 114 (422)
T COG0738 35 LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFIL 114 (422)
T ss_pred hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 44999999999999999999999999999999999999999999999999999999999984 667899999999999
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-------------------CCchhHHHH
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------------------LNWRYAFWG 241 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------------------~gwr~~f~~ 241 (547)
|.|.+...+.+..+++...++++-.+.+++.+..+++|.++||++++.+..+ ..||++|..
T Consensus 115 a~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~ 194 (422)
T COG0738 115 ASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLI 194 (422)
T ss_pred HhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHH
Confidence 9999999999999999999998899999999999999999999999987652 248999999
Q ss_pred HHHHHHHHHHHHHhhc-cCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhh
Q 008957 242 EAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS 320 (547)
Q Consensus 242 ~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (547)
.+...+++.+...... |+..... +++.+. ++
T Consensus 195 ~~~~lvll~v~~~~~k~p~~~~~~--~~~~~~--------------------------------------------~~-- 226 (422)
T COG0738 195 LAGLLVLLAVLILLSKLPDLQVAA--PSLGAS--------------------------------------------GS-- 226 (422)
T ss_pred HHHHHHHHHHHHHhccCCcCCccc--cccccc--------------------------------------------cc--
Confidence 9887777766665544 3311110 000000 00
Q ss_pred hhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhH
Q 008957 321 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNA 399 (547)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 399 (547)
....+++++|.++...++.+++.........|++.|+.+..+.+..+ ....+..+++.++|++++.++..|+...
T Consensus 227 ~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~---- 302 (422)
T COG0738 227 AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE---- 302 (422)
T ss_pred chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH----
Confidence 13567889999999999999999999999999999999976666544 3666788899999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccch
Q 008957 400 FKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 479 (547)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~ 479 (547)
+.+....++....++.....++.. .+....+.+++.+..+|.+.+...+..+ ++...+.++. ++.++|+++-|++
T Consensus 303 -k~Laf~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l--~maivGGAiiP~l 377 (422)
T COG0738 303 -KYLAFYALIAILLLLAVALIGGVV-ALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLL--VMAIVGGAIIPPL 377 (422)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceee--eeheecchHHHHH
Confidence 677777777777777766666644 4456667788899999999999998888 5555555543 4455688888999
Q ss_pred hhhhhcccch
Q 008957 480 VGVLQDHVNN 489 (547)
Q Consensus 480 ~g~l~~~~~~ 489 (547)
.|++.|..|.
T Consensus 378 ~G~i~d~~g~ 387 (422)
T COG0738 378 QGVIADMFGI 387 (422)
T ss_pred HHHHHHhhhh
Confidence 9999998874
No 80
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.96 E-value=1.6e-32 Score=274.71 Aligned_cols=384 Identities=19% Similarity=0.222 Sum_probs=252.6
Q ss_pred ccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc---cHHHHHHHHHHhhhhhhhhhhccc
Q 008957 116 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAA 192 (547)
Q Consensus 116 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---~~~~l~~~r~l~G~~~~~~~~~~~ 192 (547)
..+.+++.+...+|..+|++++|+++||+|||++++++.++..+++++.++++ |++.++++|+++|++.|...+...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34578999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC---CchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCc
Q 008957 193 PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 269 (547)
Q Consensus 193 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 269 (547)
.++.|..|+++|++..++.+.+..+|.+++..++..+.... +||+.+++.++++++..+.. ++.||++++...+++
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGR 203 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceeccccc
Confidence 99999999999999999999999999999988876664433 49999999999887765544 556888776543332
Q ss_pred cccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccch-----hHHHHHHHHHHHH
Q 008957 270 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNF 344 (547)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 344 (547)
.+... +..++.++.+..+++.++..++.++.++.+ .+++++++++. +....+..+....
T Consensus 204 ~~~A~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 267 (451)
T PF00083_consen 204 DEEAE--KVLRKLRGKEIEDEEIEEIKAEKKESQESK--------------ASWRDLFRNKKYRKRLLIALLLQFFQQFS 267 (451)
T ss_pred ccccc--cccccccccccccccccccccccccccccc--------------eeeeecccccccccccccccccccccccc
Confidence 22111 111111111111111111111111110000 22333444322 2222222222223
Q ss_pred HHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH-----H
Q 008957 345 VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----C 419 (547)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 419 (547)
......++.|.+.++.+..+. .....+..+..+++.+++.++.||+||| +.++.+.....++.+... .
T Consensus 268 g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~ 340 (451)
T PF00083_consen 268 GINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLG 340 (451)
T ss_pred ccccccccccccccccccccc--cccccccccccccccccccccccccccc-----cccccccccccccccccccccccc
Confidence 334555666766665443333 3334455677788888888999999999 566555554444433332 1
Q ss_pred hhh----HHHHHHHHHHHHHHHhhcCccce-eeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHH
Q 008957 420 LSS----LYGFLALFTVGELLVFATQAPVN-YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 494 (547)
Q Consensus 420 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 494 (547)
.++ ....+++..+...+......+.. .+..|.+|++.|+++.|+.....++ +.+++|.+...+.+..+.+ ..+
T Consensus 341 ~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~-~~~ 418 (451)
T PF00083_consen 341 VSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI-GGFIIPFLFPYLFNNLGGW-GVF 418 (451)
T ss_pred cccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc-ccc
Confidence 122 12223333333334443444444 5568888889999999999888777 7788898888888776523 455
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc-cccccchhhhh
Q 008957 495 LALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQ 527 (547)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 527 (547)
.+.+++.++..+.. ..++|| ++++.+|.++.
T Consensus 419 ~i~~~~~~i~~i~~--~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 419 LIFAGVCLIAIIFV--YFFLPETKGKTLEEIQEM 450 (451)
T ss_pred hhhHHHHHHHHhhe--eEEEeeCCCCCHHHHHhh
Confidence 55555444433322 235677 78888887654
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=1e-28 Score=241.04 Aligned_cols=340 Identities=13% Similarity=0.020 Sum_probs=240.0
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCc----eehHHHHHHHHHHHHhhhccccHHHHHHHHH
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGSSFDFWSIAICRM 178 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~ 178 (547)
|.+|.+.+|+|.|..++|++.+++.++..++++++|++.||+||| +.+.++.++. .......++++|.+++.|+
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~ 102 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIG 102 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHH
Confidence 455778899999999999999999999999999999999999994 3333222222 2233445689999999999
Q ss_pred HhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
+.|++.+...+...+++.++ +++|+++.+......++|.++||++++++.+++|||..|++.++..++..+ ..+..|
T Consensus 103 l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~ 179 (382)
T PRK11128 103 LFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRP 179 (382)
T ss_pred HHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccC
Confidence 99999998888888887776 456889999999999999999999999999999999999988765444333 333334
Q ss_pred CccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHH
Q 008957 259 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 338 (547)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (547)
+..+. ++++.. . ++...++++++|+|.++...+.
T Consensus 180 ~~~~~----~~~~~~------------------------------~------------~~~~~~~~~i~~~~~~~~~~~~ 213 (382)
T PRK11128 180 TIMPQ----GESRQQ------------------------------E------------SAGWPAWKALLKEPTVWRFLLC 213 (382)
T ss_pred CCCCc----cccccc------------------------------c------------ccccchHHHHHcChhHHHHHHH
Confidence 32110 000000 0 0001345678899999988777
Q ss_pred HHHHHHHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH
Q 008957 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 417 (547)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (547)
.++..........+.|.|.++ .+.+... ..+..+..++.++..++.+++.||+++| +.+..+.+...+..++.
T Consensus 214 ~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~~~~~~~~~~~ 287 (382)
T PRK11128 214 VSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSAICGVVRWGLM 287 (382)
T ss_pred HHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHH
Confidence 777766666677777877765 4555433 2333455567788888889999999988 56655555555555555
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHH
Q 008957 418 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 497 (547)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 497 (547)
...++.+..++..++.+++.+...+....+..+. +++++++..+..+...+..|..+||.+.|.+.|..|. ..++..
T Consensus 288 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~~~~~~ 364 (382)
T PRK11128 288 GSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--GVFWVM 364 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHH
Confidence 5556666666666777776666666666555554 5666788888886555555778899999999998863 355555
Q ss_pred HHHHH
Q 008957 498 TSIFF 502 (547)
Q Consensus 498 ~~~~~ 502 (547)
+++.+
T Consensus 365 ~~~~~ 369 (382)
T PRK11128 365 ALVAL 369 (382)
T ss_pred HHHHH
Confidence 54443
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=3.1e-28 Score=271.65 Aligned_cols=334 Identities=12% Similarity=0.034 Sum_probs=241.0
Q ss_pred cccccccccCc--cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh---hccccHHHHHHHHHHh
Q 008957 106 SGIQGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLV 180 (547)
Q Consensus 106 ~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~ 180 (547)
+.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.+++.++. ..+++++.++++|+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 113 (1146)
T PRK08633 34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLL 113 (1146)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 44555566544 347999999999999999999999999999999999987766655543 3457899999999999
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC---------CCchhHHHHHHHHHHHHHH
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILMLPFAV 251 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---------~gwr~~f~~~~~~~~~~~~ 251 (547)
|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++... .+|++.+.+..+...++.+
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGL 193 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765 2455555555444444444
Q ss_pred HHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccch
Q 008957 252 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 331 (547)
Q Consensus 252 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (547)
+..+..|+.+......++.+.. ...+.....++.+++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~l~~~~~ 233 (1146)
T PRK08633 194 IFAYRLPKVPAAAPEVFDKKKY----------------------------------------LFPKLLWRNLKLLRSDRV 233 (1146)
T ss_pred HHHhcCcCCCCCCccccccccc----------------------------------------ccHHHHHHHHHHHhcCcH
Confidence 4444445533221100000000 001112245667788888
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccceeEeeccCchh-hH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHH
Q 008957 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 409 (547)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 409 (547)
++...+..++.......+..++|.|+.+..+.+.. .. .+.....++.+++.++.+++.||++++ ..+..+.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~ 308 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALG 308 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHH
Confidence 88877777777777777778888888887777654 33 445566788889999999999999887 444444444
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc
Q 008957 410 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 485 (547)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 485 (547)
..+..++.....+.+..++..++.+++.+...++...++.+..|++.||+++|+.+.+.++ |.++++.+.+.+..
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~ 383 (1146)
T PRK08633 309 LALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 4444444444445566666667777777777777777888888899999999999877776 76666656555543
No 83
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=5.9e-27 Score=230.30 Aligned_cols=368 Identities=11% Similarity=0.038 Sum_probs=236.6
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.++.+..|+|-+ .+..|+.+.+.++.+++.++.|+++|.||||.+++.+.++..+|+++++-++|...++.+..+.|+|
T Consensus 66 ~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvg 144 (599)
T PF06609_consen 66 ILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVG 144 (599)
T ss_pred HHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHh
Confidence 347889999864 7789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc-cCccC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK-PLQLK 262 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~ 262 (547)
.|.... ....++|..|.|.|+...++.....-....+++.++..+..+.+|||.|++.++...+.+++.+++. |.+.+
T Consensus 145 aG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~ 223 (599)
T PF06609_consen 145 AGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRA 223 (599)
T ss_pred hHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 876654 5666899999999998888887777666667888888777778999999999998777666555443 33221
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccc--cccccchhhhhcccccchh------------------hhhhh---hhh
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVS--EDISDQASERSIKSIGESR------------------FLNQL---SQF 319 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------------------~~~~~---~~~ 319 (547)
..+.++..++ +...+.+....-.-.. ..+.-..........+|+. .++.. ++.
T Consensus 224 ~~~~~~~s~~----~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~P 299 (599)
T PF06609_consen 224 QLHGRKLSKR----EQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDP 299 (599)
T ss_pred hhccccCcHH----HHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCC
Confidence 1111110000 0000000000000000 0000000000000001100 00111 112
Q ss_pred hhhhHhhccc-chhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchh----hHhhhhhhcccccccceeeeeeeecccc
Q 008957 320 SQDTKVLLQE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA----DMMFGGVTIVCGIVGTISGGFILDQMGA 394 (547)
Q Consensus 320 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 394 (547)
.. +.+++++ +.+...++..++....++....+.|......++.++. ..........+..++.++.|.+..++++
T Consensus 300 l~-P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~ 378 (599)
T PF06609_consen 300 LF-PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRH 378 (599)
T ss_pred cC-CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccc
Confidence 22 3457776 4566666677777777778777778776666655542 1233344556667777778888877765
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhc
Q 008957 395 TISNAFKLLSAATFLGAISCLTAF--CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (547)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (547)
-+ +.++.+..+..+++-.+. -.++....+.+.++.+++.+....+......-..|++.-+++.|+..++..+ |
T Consensus 379 ~K----w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~-G 453 (599)
T PF06609_consen 379 IK----WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSI-G 453 (599)
T ss_pred hh----HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHH-h
Confidence 43 444444444333322222 2234445556667777777766666666666678889999999998766666 7
Q ss_pred CCCccchhhhh
Q 008957 473 DVPSSPLVGVL 483 (547)
Q Consensus 473 ~~~~~~~~g~l 483 (547)
+.+|..+...+
T Consensus 454 GsIg~aIy~~I 464 (599)
T PF06609_consen 454 GSIGYAIYNAI 464 (599)
T ss_pred hHHHHHHHHHH
Confidence 67676655444
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=2.1e-28 Score=242.23 Aligned_cols=355 Identities=16% Similarity=0.062 Sum_probs=224.0
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh---ccccHH-HHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFW-SIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~-~l~~~r~l~G 181 (547)
..+.+++|++..+.|++.+++.++..++++++|+++||+|||++++++..+.+++..... .++... ......++.+
T Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (420)
T PRK09528 35 IWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGG 114 (420)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677999999999999999999999999999999999999999887766655443221 111110 0112222233
Q ss_pred hhhhhhhhcccccccccCC--CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 182 VGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
+..+.........+.++.+ .+++++.++......++|..++|++++.+.+ .+|++.|++.++++++..++.++..|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 115 IYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccccc
Confidence 3333333333333333333 3457888899999999999999999998876 489999999988887766666555444
Q ss_pred ccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHH
Q 008957 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (547)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (547)
+++... ..+.. . + ++ + +...++.+..+|+|.++...+..
T Consensus 194 ~~~~~~---~~~~~----~--------------~--------~~-~-----------~~~~~~~~~~l~~~~~~~l~l~~ 232 (420)
T PRK09528 194 APSTAK---VANAL----G--------------A--------NA-S-----------AVSLKDALALLKLPKFWFLVLYV 232 (420)
T ss_pred ccchhh---hccch----h--------------c--------cc-c-----------cccHHHHHHHccCCCeEeehHHH
Confidence 211100 00000 0 0 00 0 00012345577888777655554
Q ss_pred HHHHHHHHHHhhhccceeEeec---cCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH
Q 008957 340 IAYNFVIGAYSYWGPKAGYNIY---HMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 415 (547)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (547)
++..........+.|.|+.+.. +.+... ..+..+..++.+++.++.|++.||+++| +.+..+..+..+..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~~~ 307 (420)
T PRK09528 233 IGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTIMAVRII 307 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHHHH
Confidence 4444444444445566554432 222212 2334455667778899999999999998 555555555444444
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHH-HHHHHHhhcCCCccchhhhhhcccchhHHHH
Q 008957 416 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 494 (547)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 494 (547)
+....++.+..+....+.+.......+....+..+..|++.+++..+. .+....+ |.+++|.+.|++.|..| |+..|
T Consensus 308 l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l-g~~ig~~~~G~l~~~~G-~~~~f 385 (420)
T PRK09528 308 GSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL-GAVFLSTLAGNLYDSIG-FQGTY 385 (420)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH-HHHHHHHHHHHHHHhhC-chHHH
Confidence 444455666555555555555554445555666777888888887665 4444555 88899999999999876 88888
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 495 LALTSIFFLAAGIWF 509 (547)
Q Consensus 495 ~~~~~~~~~~~~~~~ 509 (547)
.+.+++.++..++..
T Consensus 386 ~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 386 LILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887777665554433
No 85
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=2.1e-27 Score=235.11 Aligned_cols=352 Identities=16% Similarity=0.142 Sum_probs=269.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc-----cccHHHHHHHHHHh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLV 180 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~ 180 (547)
+-+..++.-|+...+++..+..+...+.++++|.++||++|||+++.+-++.++..++.++ ..+.+.+++.-++.
T Consensus 34 ~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 34 AWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLL 113 (524)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 4455566678889999999999999999999999999999999999999887766555443 24788999999999
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
|++.+...|+..+++.|..|+++...+.++.+...++..++||.++|.+....|-.+.|.+.++..++..+......++.
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~ 193 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP 193 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 99999999999999999999999999999999999999999999999999888989999998776555444333332221
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
.+. +..++ +..++....++.+.++|.+...++..+
T Consensus 194 ~~~---~~~~e------------------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~ 228 (524)
T PF05977_consen 194 PPS---SLPRE------------------------------------------RFFSALREGLRYVRSSPPLRSVLLRSF 228 (524)
T ss_pred ccc---ccchh------------------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHH
Confidence 100 00000 112233355666777787776666666
Q ss_pred HHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH
Q 008957 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (547)
+.+.....+...+|.+.++..+.+.... .+.+..+++.++|.++.+++.+|++++ +++..+.+..+...+....
T Consensus 229 ~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 229 LFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLAL 303 (524)
T ss_pred HHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhc
Confidence 6666666666778988888777776554 455677889999999988888888776 5666666666666666666
Q ss_pred hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHH
Q 008957 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 499 (547)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 499 (547)
.++.+...+.+++.|++.........+..+...|++.||++++++.+.... +..+|..+.|.+.+..| ....+.+.++
T Consensus 304 ~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~g-~~~al~~a~~ 381 (524)
T PF05977_consen 304 SPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHFG-VRTALLIAGA 381 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 677777777888888888877777888888999999999999999877776 77889999999999876 4456666555
Q ss_pred HHHHHHHHHH
Q 008957 500 IFFLAAGIWF 509 (547)
Q Consensus 500 ~~~~~~~~~~ 509 (547)
+.+++.++..
T Consensus 382 ~lll~~~~~~ 391 (524)
T PF05977_consen 382 ALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHH
Confidence 5444444433
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=1.6e-27 Score=234.10 Aligned_cols=347 Identities=10% Similarity=0.019 Sum_probs=233.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCC-ceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
+.+.+++|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+++.|++.|++.
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY 106 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 67788899999999999999999999999999999999965 77888889998899888899999999999999999987
Q ss_pred hhhhhccccccc--------ccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 185 ASFISLAAPFID--------DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 185 ~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
+...+...++.. |......|.+.+| .+|.++|+++++.+....+|+ +|++.++..++..+. .+.
T Consensus 107 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~ 178 (418)
T TIGR00889 107 MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALT 178 (418)
T ss_pred ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-Hhc
Confidence 766665554432 2233334555555 367888898888874433455 355666655554443 344
Q ss_pred ccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHH
Q 008957 257 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 336 (547)
Q Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (547)
.||.++.. ++++... . +....+.+.++|+|.++...
T Consensus 179 ~~e~~~~~--~~~~~~~----------------------------------------~--~~~~~~~~~~~k~~~~~~~~ 214 (418)
T TIGR00889 179 LPDIPVAK--STAKMSI----------------------------------------K--VMLGLDAFILFKNKRMAIFF 214 (418)
T ss_pred CCCCCCCc--cccccCH----------------------------------------H--HHhhhhHHHHhcCCCeeeHH
Confidence 56532110 0000000 0 00001234577888887777
Q ss_pred HHHHHHHHHHHHHhhhccceeEeeccCc--------hhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHH
Q 008957 337 LGYIAYNFVIGAYSYWGPKAGYNIYHMS--------NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 408 (547)
Q Consensus 337 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 408 (547)
+..++..........+.|.+.++.+... ........+..+..+++.++.+++.||+|+| +.+..+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l~~~~~ 289 (418)
T TIGR00889 215 FFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVMLLSLV 289 (418)
T ss_pred HHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHH
Confidence 7666665555455556666665533111 1112344556677888889999999999998 66666665
Q ss_pred HHHHHHHHHHHhh-h---HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhh
Q 008957 409 LGAISCLTAFCLS-S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (547)
Q Consensus 409 ~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~ 484 (547)
+..+...+..... + .+..++..++.+.+.+...+.....+.+..|++.|+++.|+.+...+.+|.++||.+.|++.
T Consensus 290 ~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 290 AWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred HHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5555443333322 1 23334445556565555556666777888899999999999975444448889999999999
Q ss_pred cccc-----hhHHHHHHHHHHHHHHHHHHH
Q 008957 485 DHVN-----NWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 485 ~~~~-----~~~~~~~~~~~~~~~~~~~~~ 509 (547)
|+.| +|+..|.+.+++.+++.++..
T Consensus 370 ~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 370 EKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9865 377888877777666554444
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=2.6e-27 Score=229.39 Aligned_cols=314 Identities=13% Similarity=0.070 Sum_probs=229.5
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-----CCcee-hHHHHHHHHHHHHhhhcc---ccHHHH
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSI 173 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~a---~~~~~l 173 (547)
+.+|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++. .+.+.+
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 45688999999999999999766 455555 99999999998 89986 567788888887777777 466677
Q ss_pred HHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC--------chhHHHHHHHH
Q 008957 174 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAIL 245 (547)
Q Consensus 174 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~~~~~~ 245 (547)
.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..+ ||..|++.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~ 166 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALL 166 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHH
Confidence 7888888999998999999999999999999999999999999999999999999988888 99999999988
Q ss_pred HHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHh
Q 008957 246 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 325 (547)
Q Consensus 246 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (547)
.++..+..++..||+... ++++ + +..++..+.++.
T Consensus 167 ~l~~~~~~~~~~~e~~~~--~~~~-~------------------------------------------~~~~~~~~~~~~ 201 (356)
T TIGR00901 167 ILPGLLVTLFLAKEPQED--ASVP-K------------------------------------------PLTQAVLKPIRE 201 (356)
T ss_pred HHHHHHHHHHhccCCCcc--cccc-h------------------------------------------hHHHHHHHHHHH
Confidence 777665555555552111 0000 0 000011234556
Q ss_pred hcccch---hHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhh-cccccccceeeeeeeecccccchhHH
Q 008957 326 LLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVT-IVCGIVGTISGGFILDQMGATISNAF 400 (547)
Q Consensus 326 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~ 400 (547)
+++++. ++...+..++.....+....+.|.|+++ .+.+.... ...... .++.+++.++++++.||+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~----- 275 (356)
T TIGR00901 202 FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL----- 275 (356)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----
Confidence 666664 6666666666777777788888988887 66665443 223222 356778899999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHH
Q 008957 401 KLLSAATFLGAISCLTAFCL-----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 469 (547)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~ 469 (547)
+.+..+.++..+...+.... ++.+......++.+++.+...+....+..+..|+++||+..|+.+...+
T Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 276 YALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 44444444444333322221 2234444555566777778888889999999999999999999876543
No 88
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.1e-26 Score=207.58 Aligned_cols=344 Identities=14% Similarity=0.063 Sum_probs=270.1
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
|.+++|++|+|+|.+..|++.++..+...+.+++..+++.|+|.++.+..++++.++|.++-... +.+.++.+-.+.|.
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~ 111 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGA 111 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999999999999999999999999999999999887 78889999999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC-CchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
|.+...+..+.++-+.+|+| -+..+|+|....++|..+++.++..+.++. |||.....-+.++++..++++ |...
T Consensus 112 gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~ 187 (395)
T COG2807 112 GIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQAL 187 (395)
T ss_pred hHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhcc
Confidence 99999999999999999986 899999999999999999999998888777 799999999988887766655 3321
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (547)
+.+....+.+ . .+-..++|+|.-|...+.+.+
T Consensus 188 r~~~~~~~~~-~-----------------------------------------------~~~~~vw~~~~aW~vtLfmGl 219 (395)
T COG2807 188 REQAASIATK-L-----------------------------------------------VSVRKVWRSPLAWQVTLFMGL 219 (395)
T ss_pred cccccccccc-c-----------------------------------------------ccccccccCchhHHHHHHHHh
Confidence 1110000000 0 112457899999999999999
Q ss_pred HHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 008957 342 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 421 (547)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (547)
+++.+|....|+|.++.+.+-....+..+.++..+.+++..+....+.+|...++ +..+....+..+..+...+.+
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~~~~~~~~l~G~~G~~~~P 295 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLVVLALLLMLVGLVGLLLAP 295 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999997665555556667778888999999999998755443 444443333333333322222
Q ss_pred --hHHHHHHHHHHHHHHHhhcCccceeeeecccCC-cchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHH
Q 008957 422 --SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 498 (547)
Q Consensus 422 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 498 (547)
..+.+ .++.|++.+..++.....+...... +..+.-.|+.+.+.+++. ..||.++|++.|.+|+|...+...+
T Consensus 296 ~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllA-a~GP~l~G~lhDa~gsw~~~~~~l~ 371 (395)
T COG2807 296 GQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLA-AFGPWLFGFLHDATGSWSAPLVLLA 371 (395)
T ss_pred hhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHH-hhhhhhHhHHHHhcCChHHHHHHHH
Confidence 22222 4666777777777666666555444 778888888888888866 5599999999999999988877777
Q ss_pred HHHHHHHHH
Q 008957 499 SIFFLAAGI 507 (547)
Q Consensus 499 ~~~~~~~~~ 507 (547)
.+.+...+.
T Consensus 372 ~~~i~m~i~ 380 (395)
T COG2807 372 LATLLMLIF 380 (395)
T ss_pred HHHHHHHHH
Confidence 665544443
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=4.3e-27 Score=210.57 Aligned_cols=357 Identities=14% Similarity=0.058 Sum_probs=226.1
Q ss_pred ccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhccc
Q 008957 113 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 192 (547)
Q Consensus 113 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~ 192 (547)
+.+....|.+.+.|++++.+.++.+|.++||+|||++++++++..++...+.+.+.||..+++.|++.|+..| ...++.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHH
Confidence 3455677999999999999999999999999999999999999999999999999999777778999999998 556799
Q ss_pred ccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC---CCCchhHHHHHHHHHHHH----HHHHHhhccCccCCCC
Q 008957 193 PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWGEAILMLPF----AVLAFVIKPLQLKGFA 265 (547)
Q Consensus 193 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---~~gwr~~f~~~~~~~~~~----~~~~~~~~p~~~~~~~ 265 (547)
++++|.+++|+|+++++.+...+++|.++||.+|+++.. ..| +.+|.....+..+. .....++.||+.+.++
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk 221 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRK 221 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchh
Confidence 999999999999999999999999999999999999986 222 22233222222222 2233445588765433
Q ss_pred CCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHH
Q 008957 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (547)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (547)
..+++.... +....+.+ ..+.. + .......+++......-....+.+-.+.+...
T Consensus 222 ~~~~~~~~~------------------~~~~~~~~--~~~~~-~----~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l 276 (451)
T KOG2615|consen 222 RNDEHSTLQ------------------EAADDRLA--LLKFA-R----IFKVAALRNPPLLDFISVLRIFGLHYFLYLEL 276 (451)
T ss_pred hcccccchh------------------hhhhhhhh--hcchh-h----hhhhhhhcCccccchHHHHHHHHHHHHHHHHH
Confidence 221111000 00000000 00000 0 00000011111110111223334445566666
Q ss_pred HHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 008957 346 IGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 425 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (547)
+....++.+.+....++.++.+.. -+....++.+.++.+.+..+..+.+......+.....++....++.........
T Consensus 277 ~s~~~~t~~~l~~~rfg~ss~~~G--~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~ 354 (451)
T KOG2615|consen 277 FSGLENTVLFLTHGRFGYSSMQQG--KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVV 354 (451)
T ss_pred HHHHHhhHHHhhcCccCCChhhhe--eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchh
Confidence 666667666666677777754431 222233344444555555554444321113444444444444444444445555
Q ss_pred HHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHH
Q 008957 426 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 499 (547)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 499 (547)
......+..+......+.++.+.....|++.||+.+|+..+...+ +-++||.+.|.+.....+-+..+...+.
T Consensus 355 l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al-aRaiGPlv~g~i~~Ws~~~~~a~~~~~~ 427 (451)
T KOG2615|consen 355 LYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGAL-ARAIGPLVSGVIFSWSQGAQPAYIAWGA 427 (451)
T ss_pred hhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHH-HHHhhhhhhheeEEEecCCCceeeehHH
Confidence 556666666777777777888888888889999999999887777 8899999998887654333333333333
No 90
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=9.2e-27 Score=228.90 Aligned_cols=345 Identities=15% Similarity=0.087 Sum_probs=229.0
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-----CCce-ehHHHHHHHHHHHHhhhcc---ccHHHHH
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFR-LIGVGLSVWTFATAGCGSS---FDFWSIA 174 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~a---~~~~~l~ 174 (547)
.+|.+-++.|+|.+++|++..+... .+..+++|+++||+ |||| .++++.++.+++..+.++. .+++.++
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~ 98 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLA 98 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHH
Confidence 4477888889999999999777776 59999999999999 8876 7888888888888777776 4578888
Q ss_pred HHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-CCchhHHHHHHHHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLA 253 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~ 253 (547)
+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||..|++.++..++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 99 GLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999999999999999999999999999999998885 599999999988776655543
Q ss_pred HhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhH
Q 008957 254 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 333 (547)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (547)
+..||++... ++++.. .++..+++++++++|.++
T Consensus 179 -~~~~e~~~~~---~~~~~~------------------------------------------~~~~~~~~~~l~~~~~~~ 212 (402)
T PRK11902 179 -LWAPEPEVPA---RPPRSL------------------------------------------GEAVVGPLRDFFSRRGAW 212 (402)
T ss_pred -HhcCCCcccc---cccchh------------------------------------------HHHHHHHHHHHHhCcCHH
Confidence 3445432110 000000 001124566788999888
Q ss_pred HHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhh-hh-hcccccccceeeeeeeecccccchhHHHHHHHHHHHHH
Q 008957 334 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 411 (547)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 411 (547)
...+..++..........+.+.++.+..+.++...... .. ..++.+++.++++++.||+++| +.+.....+..
T Consensus 213 ~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~ 287 (402)
T PRK11902 213 ALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQA 287 (402)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHH
Confidence 77766555554433333333344555566665444222 22 2345788899999999999987 44433333322
Q ss_pred HHHHHH---HHh-hhHHHHHHHHHH----HHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhh
Q 008957 412 ISCLTA---FCL-SSLYGFLALFTV----GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 483 (547)
Q Consensus 412 ~~~~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l 483 (547)
+..+.. ... ++.+...+...+ .++..+.........+.+..|.+. .+..+....+ +.++++.+.|.+
T Consensus 288 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~~~~~~~G~l 362 (402)
T PRK11902 288 VSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASV-GRVYVGPTSGYL 362 (402)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHH-HHHHHHHHHHHH
Confidence 222111 122 233433333322 233333444445555555555444 3444333333 544445589999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHH
Q 008957 484 QDHVNNWRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~ 507 (547)
.|..| |...|...+++.+++.++
T Consensus 363 ~~~~G-~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 363 VEAYG-WPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHhC-hHHHHHHHHHHHHHHHHH
Confidence 99987 777777776666555443
No 91
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=1.8e-26 Score=230.34 Aligned_cols=332 Identities=14% Similarity=0.106 Sum_probs=239.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh----cCCce-ehHHHHHHHHHHHHhhhcccc------HHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIA 174 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~------~~~l~ 174 (547)
+.+.+++|+++.++|++.++..+..++..++.|+++|| +|||| .++.+.+..+++.+++.+.++ ...++
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 103 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAY 103 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 66788899999999999999999999999999999997 67744 677888888888888776654 45677
Q ss_pred HHHHHhhhhhhhhhhcccccccccC-CCCCcchhhhHHHHhhhhhhhhhhhhHHhhc-------CCCCchhHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILM 246 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-------~~~gwr~~f~~~~~~~ 246 (547)
+.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+. +..+||+.+.+.++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~ 183 (437)
T TIGR00792 104 ITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIG 183 (437)
T ss_pred HHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHH
Confidence 7888999998887777888899987 4688999999999988888877766654443 3468999999999988
Q ss_pred HHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhh
Q 008957 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (547)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (547)
++..++.++..||.+... +++++ ...+..+.++.+
T Consensus 184 ~~~~~~~~~~~~e~~~~~--~~~~~-------------------------------------------~~~~~~~~~~~l 218 (437)
T TIGR00792 184 VVSLIICFFGTKERYSEI--PKNIE-------------------------------------------KKLSLKQIFKAL 218 (437)
T ss_pred HHHHHHHHcCCEecCCCC--Ccccc-------------------------------------------cCCCHHHHHHHH
Confidence 887777666666532110 00000 000112446778
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHH
Q 008957 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (547)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (547)
+++|.++...+..++..........+.+.|.+...+.+.....+..+..++.+++.++.+++.||+|+| +.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~ 293 (437)
T TIGR00792 219 FKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGG 293 (437)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHH
Confidence 899999888877777777777666677777776665333333444556788889999999999999988 555555
Q ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhhcCccceeeeecccC-------CcchhHHHHHHHHHHHhhcCCCccc
Q 008957 407 TFLGAISCLTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSP 478 (547)
Q Consensus 407 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~~~~~ 478 (547)
..+..+..+..... ++.+...+..++.+++.+...+.......+..+ ++.+|...|+.+..... |..+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g~~lg~~ 372 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-GQALAGF 372 (437)
T ss_pred HHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-HHHHHHH
Confidence 54444444333332 344445555556666666555555556555543 46689999999887777 8888999
Q ss_pred hhhhhhcccc
Q 008957 479 LVGVLQDHVN 488 (547)
Q Consensus 479 ~~g~l~~~~~ 488 (547)
+.|++.+..|
T Consensus 373 i~g~ll~~~G 382 (437)
T TIGR00792 373 LVGLILGIIG 382 (437)
T ss_pred HHHHHHHHcC
Confidence 9999987654
No 92
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=7.3e-27 Score=229.42 Aligned_cols=351 Identities=13% Similarity=0.060 Sum_probs=231.1
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh---hccc-----cHHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSF-----DFWSIAICR 177 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a~-----~~~~l~~~r 177 (547)
+.+.+++|.+..+.|++.+++.++..++++++|+++||+|||+.++.+++..+++.... .+.+ .+..+++.|
T Consensus 27 ~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (396)
T TIGR00882 27 IWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGG 106 (396)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34567799999999999999999999999999999999999999998877766544332 1221 233456678
Q ss_pred HHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 178 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 178 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
++.|++.+...+....+..|.. +++++..+......++|.++||++++.+.+ .+||+.|++.+++.++..++.++..
T Consensus 107 ~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 107 LYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred HHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhC
Confidence 8888888887777777776643 335567788888899999999999998865 5999999999988887776665554
Q ss_pred cCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHH
Q 008957 258 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 337 (547)
Q Consensus 258 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (547)
|+.+.. ++.+.. . +.+ + + +...++.++++|+|.++...+
T Consensus 184 ~~~~~~----~~~~~~----~-----------------~~~----~-~-----------~~~~~~~~~~l~~~~~~~~~l 222 (396)
T TIGR00882 184 PKAPSS----ATVANA----L-----------------GAN----A-S-----------AFSLKLALELFRQRKFWMFVL 222 (396)
T ss_pred CCCchh----hhhhcc----c-----------------ccc----c-C-----------CCCHHHHHHHHcCCcHHHHHH
Confidence 442111 000000 0 000 0 0 000133567788888877666
Q ss_pred HHHHHHHHHHHHhhhccceeEeecc---Cchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH
Q 008957 338 GYIAYNFVIGAYSYWGPKAGYNIYH---MSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (547)
Q Consensus 338 ~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (547)
..++..........+.|.|+++... .+... .....+..+..+++.+..+++.||+++| +.+..+..+..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~l~ 297 (396)
T TIGR00882 223 YVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMSVR 297 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHH
Confidence 5555555555554555666554332 22211 2333455566777788889999999998 5555555544444
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHH-HHHHHHhhcCCCccchhhhhhcccchhHH
Q 008957 414 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRK 492 (547)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 492 (547)
..+....++.+...+..++.+.+.............+..+++.++++.+. .+....+ |.+++|.+.|++.|..| |..
T Consensus 298 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l-g~~~~~~l~G~l~~~~G-~~~ 375 (396)
T TIGR00882 298 IIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL-AMIFLSTLAGNMYDSIG-FQG 375 (396)
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH-HHHHHHHhHHHHHHhcc-cHH
Confidence 44434445555555555555544433333333344555667777776665 4444555 88999999999999876 888
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 493 TTLALTSIFFLAAGI 507 (547)
Q Consensus 493 ~~~~~~~~~~~~~~~ 507 (547)
.|.+.+++.++..++
T Consensus 376 ~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 376 AYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888776655544
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=9e-27 Score=236.81 Aligned_cols=354 Identities=14% Similarity=0.125 Sum_probs=235.0
Q ss_pred ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhh
Q 008957 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (547)
Q Consensus 109 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~ 188 (547)
.+.+..+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++.++++|++.+++.|+++|++.++..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 35667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCC
Q 008957 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 268 (547)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 268 (547)
..+..+++|++++++|+.++.+ ......|..++++.++++.. +|||.+++..+++++..++ ++++||++++.....
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG 265 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence 9999999999999999999999 77777777888888888887 7999999999999887766 556668776654333
Q ss_pred ccccccc-cccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHH
Q 008957 269 SGKAQVV-ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 347 (547)
Q Consensus 269 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (547)
+.+...+ .++..+.++... +..+..+.....+..+ ....+....+..+++.|.+....+...+..+...
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ 335 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKL--SVKELLRLELLLRPLK--------LLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFS 335 (521)
T ss_pred chHHHHHHHHHHHhhcCCCC--CcHHHHHHHHHhhHhh--------hhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHh
Confidence 3221111 111111110000 0000000000000000 0000001224556666644443333333332222
Q ss_pred HHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhH---H
Q 008957 348 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL---Y 424 (547)
Q Consensus 348 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 424 (547)
...+-++..... .+.+. .....+.+.....+....+...|++||| .....+.++..++++........ +
T Consensus 336 ~~y~gl~~~~~~-lg~~~--~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (521)
T KOG0255|consen 336 LVYYGLSLNVSG-LGGNI--YLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGW 407 (521)
T ss_pred HHHHhhhhhhhh-cCchH--HHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhH
Confidence 222222222222 22221 1222233336666667778889999998 66666666666665555544322 2
Q ss_pred HHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc
Q 008957 425 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 485 (547)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 485 (547)
...+...+..++.+..+...+....+.+|+..|..+.+.......+ |.+++|.+.-....
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~-~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 408 LHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARL-GSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 4566666667777777777788888889999999999999776666 88888866544433
No 94
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=8.6e-26 Score=224.73 Aligned_cols=397 Identities=13% Similarity=0.037 Sum_probs=236.0
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh-cCCceehHHHHHHHHHHHHhhhccccHHH-HHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~-l~~~r~l~G~~ 183 (547)
..+.+++|++..+.+++.+.+.....+..+++|+++|| +||||+++++.+++++++++++++++... ++++|+++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 56788899999999999999998999999999999999 99999999999999999999999887555 55899999999
Q ss_pred hhhhhhcccccccccCCCC--CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 184 EASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
.|...|...++++|.+|++ +|++++++++.+.++|..+||.+++++.++.|||+.|++.++ +++..++.+.+.++..
T Consensus 119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~ 197 (489)
T PRK10207 119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMV 197 (489)
T ss_pred cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhh
Confidence 9999999999999999877 457899999999999999999999999999999999999655 4454454444444322
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhh-------hhhhhhhhhhHhhcccchhHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL-------NQLSQFSQDTKVLLQEKVYVV 334 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 334 (547)
+..+++.+++........... .. -..-........+........-.. -..... ....+.+|+|.+..
T Consensus 198 ~~~~~~~~~~~~d~~~~~l~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~-~~~~~~~r~r~~~~ 271 (489)
T PRK10207 198 KDIGSEPDHKPMSFSKLLLVL--LG---SVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREA-FKLDKTGRNKMFVA 271 (489)
T ss_pred cccCCCCCccchhhhhHHHHH--HH---HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Confidence 211100000000000000000 00 000000000000000000000000 000000 00013445555443
Q ss_pred HHHH--HHHHHHHHHHHhhhccceeEee-----ccCchhhHhhhhhhcccccccceeeeeeeecccccch--hHHHHHHH
Q 008957 335 NVLG--YIAYNFVIGAYSYWGPKAGYNI-----YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS--NAFKLLSA 405 (547)
Q Consensus 335 ~~~~--~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~ 405 (547)
..+. ...+...+....+.++.+.++. .+.......+..+..+..++..++.+++.||+++|+. .....+..
T Consensus 272 ~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~ 351 (489)
T PRK10207 272 FVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL 351 (489)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH
Confidence 3322 2223333333334455444421 1222111222233334454566667889999988742 11112222
Q ss_pred HHHHHHHHHHHH-----HHh-----hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCC
Q 008957 406 ATFLGAISCLTA-----FCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (547)
Q Consensus 406 ~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (547)
+.++..+..+.. ... .+.++.+...++.+.+.....++....+.+..|++.+|.++|+.+..... |..+
T Consensus 352 G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i-g~~l 430 (489)
T PRK10207 352 GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA-AFLL 430 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHH
Confidence 223222222111 111 23555666777888888888888899999999999999999999877666 7776
Q ss_pred ccchhhhhhc---------ccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 476 SSPLVGVLQD---------HVNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 476 ~~~~~g~l~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
+..+...... ..+.+...|...+...+++.++++.
T Consensus 431 g~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 431 GGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6655543311 0122445566666555554444443
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.94 E-value=3.3e-26 Score=226.81 Aligned_cols=399 Identities=12% Similarity=0.016 Sum_probs=258.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc------ccHHHHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDFWSIAICRML 179 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------~~~~~l~~~r~l 179 (547)
+.+++++|+|..+++++.++. .....++++.|+++||+|||++++++.+++++++++++++ ++++.+++.|++
T Consensus 51 ~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l 129 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGL 129 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHH
Confidence 889999999999999998874 4556788899999999999999999999999999999987 689999999999
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh-hhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
.|+|.+...+.+...+.+|+| ++||+++|+...+.++|.++ +++..+++. .+|++.|++.+++.++..++.+++.+
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999999999997 56999999999999999975 555555554 36999999999999998888887774
Q ss_pred CccCCCC---C---CCccccccc---c----cc------------------------------c----------------
Q 008957 259 LQLKGFA---P---AESGKAQVV---A----SV------------------------------S---------------- 279 (547)
Q Consensus 259 ~~~~~~~---~---~~~~~~~~~---~----~~------------------------------~---------------- 279 (547)
+++.... + +++++.... . ++ .
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~l 286 (591)
T PTZ00207 207 LPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVL 286 (591)
T ss_pred CCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4332211 1 011110000 0 00 0
Q ss_pred ----c----------CCcCC-CCCcccccccccchhhhhccccc-chhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHH
Q 008957 280 ----E----------GSEAS-NLNDHVSEDISDQASERSIKSIG-ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 280 ----~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
. ..+.. +.+.+..+..+...+....+... .........+.-+++.+.+++..+|++...++|..
T Consensus 287 ll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~ 366 (591)
T PTZ00207 287 TVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCV 366 (591)
T ss_pred HHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhh
Confidence 0 00000 00000000000000000000000 00000000001126667778899999999999888
Q ss_pred HHHHHHhhhccceeEeeccC-chh--hHhhhhhhcccccccceeeeeeeecccccc----hhHHHHHHHHHHHHHHHHHH
Q 008957 344 FVIGAYSYWGPKAGYNIYHM-SNA--DMMFGGVTIVCGIVGTISGGFILDQMGATI----SNAFKLLSAATFLGAISCLT 416 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~~~~~~~~~~ 416 (547)
.....+...+.++.+...+. ... ...+.++.++++.+|++..|.+.....+|+ ..+...+.+..+ +.+..++
T Consensus 367 g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~ll 445 (591)
T PTZ00207 367 GAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLT 445 (591)
T ss_pred CchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHH
Confidence 87777777777777776344 222 223567888999999999999873333322 111122233333 3333333
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCc-cchhhhhhcccc----h--
Q 008957 417 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDHVN----N-- 489 (547)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~-~~~~g~l~~~~~----~-- 489 (547)
+..........+..++.+++.+..++....++.+.+. ++-|+-.-+.....-+ |..+- -.+.|.++|.-. .
T Consensus 446 l~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pi-gs~~~n~~l~G~~Yd~ea~k~~~~~ 523 (591)
T PTZ00207 446 LFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVL-SAIFLNRLLYGEWYTQQADKLGQDV 523 (591)
T ss_pred HHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHH-HHHHHHHHHHHHHHHHHHhhCCCCe
Confidence 3333222466777788888888888888888888887 8888877776433333 54432 446677776421 1
Q ss_pred ------hHHHHHHHHHHHHHHHHHHHHH
Q 008957 490 ------WRKTTLALTSIFFLAAGIWFVG 511 (547)
Q Consensus 490 ------~~~~~~~~~~~~~~~~~~~~~~ 511 (547)
++.+|++++++++++.+...+.
T Consensus 524 C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 524 CTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred eCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 5678888888888777765543
No 96
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.93 E-value=3.8e-25 Score=220.25 Aligned_cols=396 Identities=12% Similarity=0.041 Sum_probs=234.1
Q ss_pred ccccc--cccCccchhHHHHHHHHHHhhhhhhhhhhhhh-cCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 107 GIQGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 107 ~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
.+.++ +|++..+.+++.+.+.+++.++++++|+++|| +|||++++++.++.+++.++.+++++++.++++|++.|+|
T Consensus 36 yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g 115 (475)
T TIGR00924 36 YLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVG 115 (475)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhc
Confidence 34555 89999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCC---cchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 184 EASFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
.|...+...++++|++|+++ |+.++++++.+.++|.++||++++++.+++|||+.|++.++..++. ++.++..++.
T Consensus 116 ~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~-~l~~~~~~~~ 194 (475)
T TIGR00924 116 SGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIG-LLTFFAGRHM 194 (475)
T ss_pred cccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHcccc
Confidence 99999999999999998764 8889999999999999999999999999899999999988655444 3333333332
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccch----------hhhhhhhhhhhhhHhhcccc
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGES----------RFLNQLSQFSQDTKVLLQEK 330 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 330 (547)
.++.++ +++....++.........................+....... ......++...+..+-.|..
T Consensus 195 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (475)
T TIGR00924 195 LRDIGS--VPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMY 272 (475)
T ss_pred cccCCC--CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHH
Confidence 211111 010000000000000000000000000000000000000000 00000000000000001112
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccceeEeeccC-----chhhHhhhhhhcccccccceeeeeeeecccccc---hhHHHH
Q 008957 331 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM-----SNADMMFGGVTIVCGIVGTISGGFILDQMGATI---SNAFKL 402 (547)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~---~~~~~~ 402 (547)
.+..+.+...++...+....+.++.+.++..+. +-....+..+..+.-++..++..++..|+.||. ....++
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 233334444444444444444455444332111 111223333444444444333333333444321 111122
Q ss_pred HHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcC
Q 008957 403 LSAATFLGAISCLTAFC---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 473 (547)
Q Consensus 403 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~ 473 (547)
..+.++..+.++.... ..+.++.+...++.+.+.....+.......+..|++.||+..|+....... |.
T Consensus 353 -~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~-g~ 430 (475)
T TIGR00924 353 -TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM-GS 430 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HH
Confidence 3333333333333221 246777788888888888899999999999999999999999999766665 87
Q ss_pred CCccchhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 474 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 474 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
.+++.+.....+.. ++...+...+.+.++..++.
T Consensus 431 ~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 431 LLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHH
Confidence 87777777665543 35455555555544444433
No 97
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=1.1e-22 Score=201.23 Aligned_cols=360 Identities=20% Similarity=0.349 Sum_probs=277.3
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc----------------
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------------- 167 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------------- 167 (547)
.+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|+++++++++++++-
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 3488999999999999999999999999999999999999999999999999999999998761
Q ss_pred ----c-----------------------------c--HH-HHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHH
Q 008957 168 ----F-----------------------------D--FW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 211 (547)
Q Consensus 168 ----~-----------------------------~--~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 211 (547)
+ + ++ .++++.++.|+|....++.+.+|+-|...+++-+..+|+.
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~ 278 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGIL 278 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHH
Confidence 0 0 33 5677999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhhhHHhhcCC------------------C-CchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcccc
Q 008957 212 YMCIPTGVALGYVYGGVVGSH------------------L-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 272 (547)
Q Consensus 212 ~~~~~~G~~~g~~l~~~l~~~------------------~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 272 (547)
.....+|.++|.++++++.+. . .|..-|++.+.+.++.++..++++.+.++..++.+..+.
T Consensus 279 ~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~ 358 (735)
T KOG3626|consen 279 YSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDL 358 (735)
T ss_pred HHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhh
Confidence 999999999999999987531 1 266778888888887777777765443222111000000
Q ss_pred ccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhh
Q 008957 273 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 352 (547)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (547)
. ..+.+.+ ..+......+..+++....+.+++||.+...+++..+....+.++.+|
T Consensus 359 ~--------------------~~k~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tF 414 (735)
T KOG3626|consen 359 H--------------------VLKTESG----GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITF 414 (735)
T ss_pred c--------------------ccccccc----cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHh
Confidence 0 0000000 011111122456788899999999999999999999999999999999
Q ss_pred ccceeEeeccCchhhH--hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH-----------
Q 008957 353 GPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------- 419 (547)
Q Consensus 353 ~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 419 (547)
+|.|++..++.++..+ +...+...+..+|.+++|+++.|+.-+.+...++.++..++..++.+..++
T Consensus 415 lPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~ 494 (735)
T KOG3626|consen 415 LPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGV 494 (735)
T ss_pred hHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccce
Confidence 9999999999986444 444555567788999999999999877544444555555555555333322
Q ss_pred --------------------------------------------------------------------hh----------
Q 008957 420 --------------------------------------------------------------------LS---------- 421 (547)
Q Consensus 420 --------------------------------------------------------------------~~---------- 421 (547)
..
T Consensus 495 ~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~ 574 (735)
T KOG3626|consen 495 TNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAK 574 (735)
T ss_pred ecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceee
Confidence 00
Q ss_pred ----------hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 422 ----------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 422 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
....+++.+++..+..+....+.+.++...+++|.|+.++|+..++.+++|.+-+|+++|++.|..
T Consensus 575 ~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 575 KGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 123455556666666777888899999999999999999999999999999999999999999854
No 98
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=1.3e-24 Score=213.10 Aligned_cols=365 Identities=10% Similarity=-0.027 Sum_probs=243.3
Q ss_pred HHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHH--HHHHHHHHhhhhhhh-hhhhhh
Q 008957 67 LVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVL--SSAFMVGLLVASPIF-ASLAKS 143 (547)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~-g~l~dr 143 (547)
+..++..++..++...... |.+|.+.+|.|.+.+++|++ .++..+...+.++++ ++..||
T Consensus 3 ~~~~~~ly~~~g~~~~~~~-----------------p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~ 65 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAM-----------------DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR 65 (390)
T ss_pred HHHHHHHHHHHHhHHHHHH-----------------HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4455566666655544333 45688999999999999997 466788888888888 447999
Q ss_pred cCCceehHHHHHHH-HHHHHhhh---cccc-HHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhh
Q 008957 144 HNPFRLIGVGLSVW-TFATAGCG---SSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTG 218 (547)
Q Consensus 144 ~Grr~~l~~~~~~~-~~~~~~~~---~a~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 218 (547)
+||||..++.+.+. ++.....+ ...+ ...++..-++.++..+...+...++..|..++++++...+....+..+|
T Consensus 66 ~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG 145 (390)
T TIGR02718 66 LGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIG 145 (390)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHH
Confidence 99999876655332 21122222 2323 3344555566667777788888888899999988899999999998999
Q ss_pred hhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccc
Q 008957 219 VALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (547)
Q Consensus 219 ~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (547)
.++|+...+++.++.|||..|++.+++.++..+..++..|+.++. +++++
T Consensus 146 ~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~---~~~~~--------------------------- 195 (390)
T TIGR02718 146 FFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVAS---PEAPL--------------------------- 195 (390)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCc---cccch---------------------------
Confidence 999999999999999999999999988877666665554432100 00000
Q ss_pred hhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhc-c
Q 008957 299 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI-V 376 (547)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~-~ 376 (547)
+ ...++++++|+|.++......++..........+.+.|+++ .+.++... ....... .
T Consensus 196 ---------------~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~ 255 (390)
T TIGR02718 196 ---------------A----RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAV 255 (390)
T ss_pred ---------------h----hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHH
Confidence 0 00235667888888877777777777677777788888877 46665444 3223333 4
Q ss_pred cccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHhhcCccceeeeec
Q 008957 377 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------SSLYGFLALFTVGELLVFATQAPVNYVCLH 450 (547)
Q Consensus 377 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (547)
..+++.+++|++.||+++| +.+..+..+.....+..... .+.........+.++..+...+.......+
T Consensus 256 ~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 330 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLW-----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMR 330 (390)
T ss_pred HHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788999999999988 45544433332222221111 111222222233333444555555556556
Q ss_pred ccCC-cchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHH
Q 008957 451 SVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 505 (547)
Q Consensus 451 ~~~~-~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 505 (547)
..++ +.+++..++.+...+. |..++|.+.|.+.|..| |...|.+.+++.+++.
T Consensus 331 ~~~~~~~~g~~~~~~~~~~~l-g~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 331 FAGDGDQAGTDVTAVQSTRDL-GELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAI 384 (390)
T ss_pred HhCcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHH
Confidence 6666 8999999999888877 88999999999999876 7677777666555543
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=9.5e-23 Score=204.26 Aligned_cols=145 Identities=17% Similarity=0.134 Sum_probs=126.2
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh-cCCceehHHHHHHHHHHHHhhhccc-cHHHHHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~G~~ 183 (547)
..+.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+++++++ +.+.++++|+++|+|
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 55678999999999999888887777777899999999 5999999999999999999998875 566778899999999
Q ss_pred hhhhhhcccccccccCCCCC--cchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHH
Q 008957 184 EASFISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 250 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 250 (547)
.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+++|||+.|++.++..++..
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999998653 45688999999999999999999999999999999999876544443
No 100
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.89 E-value=1.1e-24 Score=216.47 Aligned_cols=366 Identities=21% Similarity=0.364 Sum_probs=3.0
Q ss_pred cccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc----------------
Q 008957 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------------- 167 (547)
Q Consensus 104 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------------- 167 (547)
.+++|+++|++++++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++|++++++-
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~ 104 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN 104 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence 3489999999999999999999999999999999999999888889999999999999987641
Q ss_pred ----------------------------------ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHH
Q 008957 168 ----------------------------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM 213 (547)
Q Consensus 168 ----------------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 213 (547)
.-+..++++.++.|+|.+..++.+.+|+-|..++++-+..+|++.+
T Consensus 105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~ 184 (539)
T PF03137_consen 105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYA 184 (539)
T ss_dssp -----------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhH
Confidence 0135678899999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhHHhhcCC---------------------CC-chhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccc
Q 008957 214 CIPTGVALGYVYGGVVGSH---------------------LN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 271 (547)
Q Consensus 214 ~~~~G~~~g~~l~~~l~~~---------------------~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 271 (547)
...+|.++|.++++.+.+. .| |=.-|++.+++.++.++..++++++.+...+..++++
T Consensus 185 ~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~ 264 (539)
T PF03137_consen 185 MSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKE 264 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhh
Confidence 9999999999999876531 12 5555666777666666666665433222211111110
Q ss_pred cccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhh
Q 008957 272 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 351 (547)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (547)
....++ ++...++..+.+..+......++++...+.+++||.+....++.........++.+
T Consensus 265 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~t 326 (539)
T PF03137_consen 265 SSERKE------------------EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFAT 326 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcch------------------hhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00000000000111122355678888999999999999999999999999999999
Q ss_pred hccceeEeeccCchhhH--hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh---------
Q 008957 352 WGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--------- 420 (547)
Q Consensus 352 ~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 420 (547)
++|.|++.+++.++..+ ....+...+.++|.+++|++.+|++-+.....++.+...++..+.....++.
T Consensus 327 F~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aG 406 (539)
T PF03137_consen 327 FLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAG 406 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceee
Confidence 99999999999886443 3334455678899999999999997664333333333333333331111110
Q ss_pred ------------------------------------------hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchh
Q 008957 421 ------------------------------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRA 458 (547)
Q Consensus 421 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 458 (547)
.....++++.++..+..+....+...+....+++++|+
T Consensus 407 v~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs 486 (539)
T PF03137_consen 407 VTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRS 486 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcc
Confidence 01123344445555556677778888888999999999
Q ss_pred HHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 459 LSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 459 ~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
.|.|+...+.+++|.+-||+++|.+.|..
T Consensus 487 ~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 487 FALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp -----------------------------
T ss_pred hhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 99999999999999999999999999964
No 101
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=1.6e-22 Score=200.86 Aligned_cols=396 Identities=13% Similarity=0.017 Sum_probs=247.0
Q ss_pred hHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc
Q 008957 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (547)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~ 144 (547)
..+.++...++..++. ..... +..+.+.+++|++.++++...+...+...+-.+ +|+++||+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~----------------~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~ 87 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRL----------------PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF 87 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhh----------------hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc
Confidence 4555666667776665 33322 123778889999999999999999999999666 99999999
Q ss_pred C-----CceehHHHHHHH-HHHHHhhhccccHHHHH-HHHHHhhhhhhhhhhcccccccccCCCCCcchhhh---HHHHh
Q 008957 145 N-----PFRLIGVGLSVW-TFATAGCGSSFDFWSIA-ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS---MFYMC 214 (547)
Q Consensus 145 G-----rr~~l~~~~~~~-~~~~~~~~~a~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~ 214 (547)
+ ||+.++++.++. .++....+..++...+. +.+++.+++.+...+++-++..|..+ +++....+ +....
T Consensus 88 ~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~ 166 (468)
T TIGR00788 88 PLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGA 166 (468)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHH
Confidence 8 777888887776 34444445545644444 48899999999999999999999998 54544333 33344
Q ss_pred hhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccc
Q 008957 215 IPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 294 (547)
Q Consensus 215 ~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (547)
.++|.++|+.++|.+.+.++||..|++.+++.++..+ ..++.||.+.... ++..+.. . ....
T Consensus 167 ~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~-~~~~~~~----~------------~~~~ 228 (468)
T TIGR00788 167 SATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF-VSNLSKERRAFVR-PRIGTYL----E------------MNMA 228 (468)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-HHHhccccccccc-ccccccc----h------------hhhh
Confidence 4589999999999999999999999999888777633 3444455321000 0000000 0 0000
Q ss_pred cccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHH-HHHHHHHHhhhccceeEeeccCchhhH-hhhh
Q 008957 295 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGG 372 (547)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~ 372 (547)
.. ........++.....+..+++|.++...+..++ +......... .-.+..+..+.++... ....
T Consensus 229 ---------~~---~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~lG~s~~~~G~~~~ 295 (468)
T TIGR00788 229 ---------LL---TLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGS-VFCATTQCLPGGPSFSGMSKV 295 (468)
T ss_pred ---------hh---hhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCce-eEEEEcccCCCCcchhhhHHH
Confidence 00 000000111222344555777887775555554 2222111111 1112333455565443 3334
Q ss_pred hhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHHHHHHhhcCc
Q 008957 373 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------LSSLYGFLALFTVGELLVFATQA 442 (547)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 442 (547)
..+++.+++..+.+++.+|++.| +.+..+.++.....+.... .++.+.......+.+++.+..+.
T Consensus 296 ~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~ 370 (468)
T TIGR00788 296 VGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM 370 (468)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc
Confidence 55577777777777777777766 5666555555554432210 02222334445566667777778
Q ss_pred cceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc----hhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008957 443 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN----NWRKTTLALTSIFFLAAGIWFVGIFLKS 516 (547)
Q Consensus 443 ~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (547)
+...++++..|++.+|+..++.+.+.++ |..+++.++|.+.+..| +++..+....++.+...+.......+|+
T Consensus 371 ~~~~~~~~~~p~~~egt~~al~~s~~~l-g~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 371 PFLVLLARLCPSGCESSVFALLASILHL-GSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred cHHHHHHHhCCCCceehHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8888999999999999999999888877 88999999999988765 2444444444444433333333335565
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.6e-23 Score=179.64 Aligned_cols=362 Identities=12% Similarity=0.036 Sum_probs=241.3
Q ss_pred HHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh-c
Q 008957 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-H 144 (547)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~ 144 (547)
.++.+|+..+-.++..-+.+. ...+.+.|.+++.++..++.+.|..-..+-++++|++.|| +
T Consensus 45 ~lv~mc~lgfgsyfcyd~p~a-----------------lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~f 107 (459)
T KOG4686|consen 45 ALVFMCLLGFGSYFCYDAPGA-----------------LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRF 107 (459)
T ss_pred HHHHHHHhcccceeecCCchh-----------------hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhh
Confidence 444445555555555555443 2367888899999999999999999999999999999996 5
Q ss_pred CCceehHHHHHHHHHHHHhhh---ccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 145 NPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 145 Grr~~l~~~~~~~~~~~~~~~---~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
|-|..-++-+++..+|.++++ ..+.+|.+.++||+.|+|.-...++-..+..-|+..||.+.++|+.....-+|+.+
T Consensus 108 gir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 108 GIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 888776666666777777665 46889999999999999999888899999999999999999999999999999988
Q ss_pred hhhhHHhhcCCCCc------h---hHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccc
Q 008957 222 GYVYGGVVGSHLNW------R---YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVS 292 (547)
Q Consensus 222 g~~l~~~l~~~~gw------r---~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (547)
-..+.+++.+..+= + ...+..+.......+.+....- . .+++.++.. .++.
T Consensus 188 Nf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg----~-~D~rAeril-h~e~-------------- 247 (459)
T KOG4686|consen 188 NFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLG----L-SDDRAERIL-HLEE-------------- 247 (459)
T ss_pred eeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhh----h-hhhHHHHHH-hhhc--------------
Confidence 87777777653220 0 1111122222222222221110 0 000100000 0000
Q ss_pred cccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhh
Q 008957 293 EDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFG 371 (547)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~ 371 (547)
....+..+ ..+.+. -.|.+|.+.+.++++......+....|.++++.++.++.+. .+.
T Consensus 248 -----g~~Ge~pk--------------Ltdv~~--f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~ 306 (459)
T KOG4686|consen 248 -----GFLGEEPK--------------LTDVNT--FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNIL 306 (459)
T ss_pred -----CcccCCcc--------------cccccc--cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchh
Confidence 00000000 011111 24788999999999999999999999999999999997554 444
Q ss_pred hhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH-HHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeec
Q 008957 372 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLH 450 (547)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (547)
+.....+.+..++.|.++||.|++. +++..+.+..... ..+.+..-+++....++.+.+-...+ .....+..
T Consensus 307 s~vy~Isav~spvfg~i~Dk~G~n~----~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllAc---slWP~va~ 379 (459)
T KOG4686|consen 307 STVYGISAVLSPVFGAISDKYGFNL----WWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLAC---SLWPCVAS 379 (459)
T ss_pred hhhhhhhhhhhhhHHHhHhhhccee----hhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHHH---HHhhhhhh
Confidence 5556677777889999999999984 2222222222222 22333333444444444443333332 23444555
Q ss_pred ccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHH
Q 008957 451 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 493 (547)
Q Consensus 451 ~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 493 (547)
.+|.+.-|++.|....+.++ |.++.|++.|.+.|..|+|.+.
T Consensus 380 ~vpE~qLGTaygf~qsIqNL-gla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 380 LVPEEQLGTAYGFIQSIQNL-GLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred hCCHHHhcchHHHHHHHHhh-hhhHHhhhhheeecCCCchhhH
Confidence 67888999999999999999 9999999999999988876554
No 103
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.88 E-value=1.5e-21 Score=191.43 Aligned_cols=350 Identities=15% Similarity=0.128 Sum_probs=268.3
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHH-HHHHHHHHHHhhhcc-cc-HHHHHHHHHHhhhhhhhhhhcccc
Q 008957 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV-GLSVWTFATAGCGSS-FD-FWSIAICRMLVGVGEASFISLAAP 193 (547)
Q Consensus 117 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~a-~~-~~~l~~~r~l~G~~~~~~~~~~~~ 193 (547)
+..++..++..+..++..++.|.++|+-|+||.++. ..++..+++++..+. ++ ++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446788999999999999999999999987765544 445555566666653 33 444444555555777788888999
Q ss_pred cccccCCCCCc--------------------------chhhhHHHHhhhhhhhhhhhhHHhhcC--------CCCchhHH
Q 008957 194 FIDDNAPVPQK--------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAF 239 (547)
Q Consensus 194 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~l~~~l~~--------~~gwr~~f 239 (547)
++.|..+++++ ++..+.-.....+|.++..++.-.+.. ...-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 899998888888888887776654431 22358999
Q ss_pred HHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhh
Q 008957 240 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 319 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (547)
.+.++.-++..+..++..|+.++....++... ......++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~g~~~l 270 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS---------------------------------------YLRFGFKRL 270 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh---------------------------------------HHHHHHHHH
Confidence 99999999999988888877544211111111 111455666
Q ss_pred hhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchh
Q 008957 320 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISN 398 (547)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 398 (547)
++.+|++.+.|.....+++.+++.-+...+......|..+..+++.... .+..+..+.+++|.++.|++.||+|.|..
T Consensus 271 ~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~- 349 (477)
T PF11700_consen 271 WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK- 349 (477)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-
Confidence 7778888889999999999999999999999999999998999987665 44566679999999999999999999832
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHh
Q 008957 399 AFKLLSAATFLGAISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (547)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (547)
+.+....++..+.++.... ..+.+.+.++..+.|.+.+..++..-+++.+..|+++.+.-.|++......
T Consensus 350 --~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 350 --RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 2333333333333333333 456777888888899999999999999999999999999999999877777
Q ss_pred hcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 471 FGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 471 ~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
.+++||.+.|.+.+.+|+.+.++....++.+++.+++.
T Consensus 428 -ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 428 -SSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred -HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 78899999999999999899999888888777777665
No 104
>PRK09669 putative symporter YagG; Provisional
Probab=99.88 E-value=5.4e-22 Score=197.57 Aligned_cols=329 Identities=13% Similarity=0.055 Sum_probs=218.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh----cCCc-eehHHHHHHHHHHHHhhhcccc------HHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIA 174 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~~~l~ 174 (547)
..+.+++|++..++|.+.++..+..++..++.|+++|| +||| +.++.+.+..+++.++....++ ++.++
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 55778899999999999999999999999999999998 7774 5566777777777765544433 45566
Q ss_pred HHHHHhhhhhhhhhhcccccccccC-CCCCcchhhhHHHHhhhhhhhhhhhhHHhhc----C---CCCchhHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S---HLNWRYAFWGEAILM 246 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~----~---~~gwr~~f~~~~~~~ 246 (547)
+.-++.+.+.........++.+|+. ++++|++..++...+..+|..+++.+...+. + ..+|+..+.+.++++
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6666777766667777788999998 4578998888888888888777765443322 1 357998998888887
Q ss_pred HHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhh
Q 008957 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (547)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (547)
++..++.++..+|.... ++++ ..+..++++.+
T Consensus 194 ~v~~~~~~~~~~e~~~~----~~~~--------------------------------------------~~~~~~~~~~~ 225 (444)
T PRK09669 194 VVLFFCCFFMTKERYTP----EVDN--------------------------------------------SSSVWKDLKLL 225 (444)
T ss_pred HHHHHHHhCCeEEecCC----CCcC--------------------------------------------CCCHHHHHHHH
Confidence 77766665554442110 0000 00112556788
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHH
Q 008957 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (547)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (547)
+++|.++...+..++............+.|.+...+.......+.....+..+++.++.+++.||+|+| +....+
T Consensus 226 ~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~ 300 (444)
T PRK09669 226 LGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWT 300 (444)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHH
Confidence 899998888777666655554444444445554443332222333344566778888889999999988 444444
Q ss_pred HHHHHHHHH-HHHH-hhhHHHHHHHHHHHHHHHhhcCccceeeeecccC-------CcchhHHHHHHHHHHHhhcCCCcc
Q 008957 407 TFLGAISCL-TAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 407 ~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
.....+..+ +... .++.+...+..++.+++.+...+.....+.+..+ .+..|...|..+....+ |..+|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-g~alg~ 379 (444)
T PRK09669 301 IVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-GLAIGG 379 (444)
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-HHHHHH
Confidence 433332222 2222 2345555556666777777666666666666554 23456677777666676 888899
Q ss_pred chhhhhhcccc
Q 008957 478 PLVGVLQDHVN 488 (547)
Q Consensus 478 ~~~g~l~~~~~ 488 (547)
.+.|.+.+..|
T Consensus 380 ~i~g~ll~~~G 390 (444)
T PRK09669 380 AVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHcC
Confidence 99999887654
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.87 E-value=4.6e-21 Score=191.97 Aligned_cols=334 Identities=8% Similarity=-0.029 Sum_probs=218.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh----hcCC-ceehHHHHHHHHHHHHhhhcccc------HHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSFD------FWSIA 174 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~a~~------~~~l~ 174 (547)
..+.+.+|++..++|.+..+..+.-++..++.|+++| |+|| |+.++++.+..+++.++....++ +..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 4456678999999999999999999999999999999 6698 56777788888877665544331 33455
Q ss_pred HHHHHhhhhhhhhhhcccccccccC-CCCCcchhhhHHHHhhhhhhhhhhhhHHhh----c---CCCCchhHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVV----G---SHLNWRYAFWGEAILM 246 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l----~---~~~gwr~~f~~~~~~~ 246 (547)
+.-++.+++.....+...+++.|.. +++||.+..++-..+.++|..+++.+...+ . +..+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6666778888888888889999998 588999999887777777755555444322 1 1236787777777776
Q ss_pred HHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhh
Q 008957 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (547)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (547)
++..+..++..+|.... ++.+... +...+..+.++.+
T Consensus 191 ~~~~~~~~~~~~e~~~~---~~~~~~~----------------------------------------~~~~~~~~~~~~~ 227 (473)
T PRK10429 191 IVSTIITLRNVHEVYSS---DNQVSAE----------------------------------------GSHLTLKDIVALI 227 (473)
T ss_pred HHHHHHHHcCceecCCc---ccccccc----------------------------------------ccCCCHHHHHHHH
Confidence 66666665544542111 0000000 0000122445667
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHH
Q 008957 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (547)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (547)
++||.++..++..++..........+.+.|.+...+.......+..+..++.+++.++.+++.||+|+| +.+..+
T Consensus 228 ~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~ 302 (473)
T PRK10429 228 YKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGA 302 (473)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHH
Confidence 789988888887777777777777777767766555433222333444577788888899999999998 555444
Q ss_pred HHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhhcCccceeeeecccC-------CcchhHHHHHHHHHHHhhcCC
Q 008957 407 TFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDV 474 (547)
Q Consensus 407 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~ 474 (547)
..+.++..+.... ..+.+..++...+.+++.+..+.....++.+.++ .+..|...|.......+ |..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~-~~a 381 (473)
T PRK10429 303 SIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG-GSA 381 (473)
T ss_pred HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH-HHH
Confidence 4433332222211 2334444444455555566555555556666544 23456677887666666 888
Q ss_pred Cccchhhhhhcccc
Q 008957 475 PSSPLVGVLQDHVN 488 (547)
Q Consensus 475 ~~~~~~g~l~~~~~ 488 (547)
+++.+.|++.+..|
T Consensus 382 l~~~i~g~~l~~~G 395 (473)
T PRK10429 382 FAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHcC
Confidence 89999999877544
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.86 E-value=4.5e-21 Score=184.72 Aligned_cols=330 Identities=18% Similarity=0.125 Sum_probs=236.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC-CceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
+..-++.|.|..|+|.+.+...+...++++++|.++||++ +|+++.+..++.++...+....++++.+++.-++..+..
T Consensus 26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 105 (400)
T PF03825_consen 26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFF 105 (400)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 5667778999999999999999999999999999999986 677888888888887777788899999988888888888
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhh-HHhhcCCCC---chhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY-GGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l-~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
....|...++..+... +++.-.|-.-...++|.+++... ++.+.+..+ ..+.+++.++.+++..... +.+|+.
T Consensus 106 ~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~ 182 (400)
T PF03825_consen 106 SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKT 182 (400)
T ss_pred ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 8888888888888775 34555666777777777776543 233333332 3355666665554444333 334554
Q ss_pred cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
++.+..+++.+. ....+...++|+|.+....+..+
T Consensus 183 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~llk~~~~~~Fll~~~ 217 (400)
T PF03825_consen 183 PPKRSAKESVKK---------------------------------------------LLGLDALKLLKNPRFLVFLLAAF 217 (400)
T ss_pred ccccccCCCccc---------------------------------------------ccchHHHHHhcCccHHHHHHHHH
Confidence 321111111000 00123346889999998888888
Q ss_pred HHHHHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHH
Q 008957 341 AYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (547)
+..........+.+.|+++.++.+... .....+..++.++.-...+++..|+|.+ +++..+.+..++=..+...
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHH
Confidence 888888888889999999887644322 2333455677888888889999999888 6777777666665555554
Q ss_pred h-hhHHHHHHHHH----HHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 420 L-SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 420 ~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
. ++.+...+... +-+...+..+.....++.+..|++.|+++.++++.....+|..+|..++|++.|+.|
T Consensus 293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 4 44443333333 356666667777778888889999999999999887776799999999999999876
No 107
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.86 E-value=1.1e-20 Score=183.91 Aligned_cols=366 Identities=12% Similarity=0.021 Sum_probs=238.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh----hcCCceehHHH-HHHHHHHHHhhhccccHH---------
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW--------- 171 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~a~~~~--------- 171 (547)
+.+.+++|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .+...++.++.+++++++
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 4567889999999999999999999999999999999 59999988775 666667767777776643
Q ss_pred --------HHHHHHHHhhhhhhhhhhcccccccccCCCCCc--chhhhHHHHhhhhhhhhhhhhHHhh--cCC-------
Q 008957 172 --------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSH------- 232 (547)
Q Consensus 172 --------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l--~~~------- 232 (547)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+.+.++|.++|+.++++. .+.
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 223333344457777888899999999998865 6899999999999999999999875 211
Q ss_pred ------CCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhccc
Q 008957 233 ------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 306 (547)
Q Consensus 233 ------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (547)
.+.|+.|++.++..++..++..+..+|.+.... ++.... +. ++.++ ..
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~--~~~~~~---~~--------------~~~~~-----~~-- 241 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGS--DDFINS---EA--------------APPSK-----HG-- 241 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc--ccchhh---hc--------------ccccc-----cc--
Confidence 156899999998888888888877777543211 000000 00 00000 00
Q ss_pred ccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeE-eeccCch-------hh----Hhhhhhh
Q 008957 307 IGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY-NIYHMSN-------AD----MMFGGVT 374 (547)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~-------~~----~~~~~~~ 374 (547)
.....++.+++++. ..+.++.+++..++..++...+..|.+.+.. +.++.++ .. .....+.
T Consensus 242 -----~~~~~~~i~~~~~~--mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~ 314 (477)
T TIGR01301 242 -----EEAFFGELFGAFKY--LPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLN 314 (477)
T ss_pred -----hhhhHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHH
Confidence 00112233344433 2467888888888888888888887777654 3443221 11 1112233
Q ss_pred cccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHHHH
Q 008957 375 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLALFTVG 433 (547)
Q Consensus 375 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 433 (547)
.+...+..++..++.+|+|+|+ .....+.++.+.+++...+..+ .+..++.+.+.
T Consensus 315 s~~~~i~s~~l~~l~~~~g~~k----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 315 SVVLGITSIGMEKLCRGWGAGK----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 3444455556666777777531 3334443444443333332221 25566677777
Q ss_pred HHHHhhcCccceeeeecccCC--cchhHHHHHHHHHHHhhcCCCccchhhhhhcccch-hHHHHHHHHHHHHHHHHHHH
Q 008957 434 ELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~--~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 509 (547)
|+.....+..-++++.+..++ +..|..+|+.|.+..+ ..++.....|.+.+..|+ ....+.+.++.++++.++..
T Consensus 391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 777777777777788888875 4569999999988877 777777777776665553 33455555555555555444
No 108
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=1.2e-20 Score=174.02 Aligned_cols=362 Identities=14% Similarity=0.111 Sum_probs=248.7
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 141 (547)
++|.+++++++..+.+.+.....+. .-.....-|+ +....-|+.-+|++.+....+++-|+.
T Consensus 42 rRW~vLl~~slL~~SN~~qWI~ya~-----------------i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~l 103 (480)
T KOG2563|consen 42 RRWVVLLAFSLLNFSNGMQWIQYAP-----------------INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWIL 103 (480)
T ss_pred hHhHHHHHHHHHHhcCcchheeehh-----------------HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhh
Confidence 3445666666666666555544432 2244555667 777788999999999999999999999
Q ss_pred hhcCCceehHHHHHHHHHHHHhhhccc------cHH--HHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHH
Q 008957 142 KSHNPFRLIGVGLSVWTFATAGCGSSF------DFW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM 213 (547)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 213 (547)
|++|-|..++++..+.++|+.+-..+. .++ ....+..+.+..+-.....-..+-.-|+++++|..+..+-.+
T Consensus 104 dk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~ 183 (480)
T KOG2563|consen 104 DKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVM 183 (480)
T ss_pred cccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHh
Confidence 999999999999999999998876553 344 666888898888887777777888899999999999999999
Q ss_pred hhhhhhhhhhhhHHhhcCCC------Cchh--HHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCC
Q 008957 214 CIPTGVALGYVYGGVVGSHL------NWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 285 (547)
Q Consensus 214 ~~~~G~~~g~~l~~~l~~~~------gwr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (547)
++.+|.++|.++...+..+- .|-- .|+..+.++.+..++..+..++.++. ++......
T Consensus 184 ~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~------------ 249 (480)
T KOG2563|consen 184 GNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAA------------ 249 (480)
T ss_pred cchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhh------------
Confidence 99999999999998887543 3544 35545555544444444444432222 11111100
Q ss_pred CCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCch
Q 008957 286 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 365 (547)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 365 (547)
.+..++.++.+..++++.+...++.+......+++..+.+-..+...+-.+.
T Consensus 250 ----------------------------~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~ 301 (480)
T KOG2563|consen 250 ----------------------------LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGV 301 (480)
T ss_pred ----------------------------hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCcc
Confidence 0012345788899999999999998888888888887776644433332222
Q ss_pred hhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH-HHHHHHh---hhHHHHHHHHHHHHHHHhhcC
Q 008957 366 ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLTAFCL---SSLYGFLALFTVGELLVFATQ 441 (547)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 441 (547)
.+.....+..+++.++.++.|.+.||.+..+. ............ ..+.... ...+.......+.+++.....
T Consensus 302 ~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~----~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~ 377 (480)
T KOG2563|consen 302 FAGYIGALMIVAGMLGALASGIIADKTKKFKL----TTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYL 377 (480)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH----HHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCC
Confidence 33455566678889999999999999887642 222222222222 1111111 233445555666777777888
Q ss_pred ccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 442 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 442 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
|...-+..|...|..-++..|+.+...++++..+ .++.+...+..+
T Consensus 378 Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~-~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 378 PIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL-VFIMGILAEDLG 423 (480)
T ss_pred CcceeeeeeeccccCCcccceeEEeehhHHHHHH-HHHHHHHhhccC
Confidence 8888888899889888888898888888866543 556666665544
No 109
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.84 E-value=1.1e-19 Score=177.72 Aligned_cols=150 Identities=14% Similarity=0.118 Sum_probs=123.9
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHHHHHHhhhccc-cHHHHHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~G~~ 183 (547)
..+.+++|++..+.+.+.+.+.....++.+++|+++||+ ||||+++++.++..++.++.+..+ +...++++..+.++|
T Consensus 34 ~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG 113 (493)
T PRK15462 34 LYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCG 113 (493)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Confidence 345677999999999999999999999999999999999 999999999999999988776543 223344455555566
Q ss_pred hhhhhhcccccccccCCCC--CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 184 EASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+.+|||+.|.+.++. .+..++.++.
T Consensus 114 ~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig-m~l~li~~~~ 187 (493)
T PRK15462 114 YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG-MIAGLVIFLC 187 (493)
T ss_pred cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH-HHHHHHHHHH
Confidence 7777777889999999975 6999999999999999999999999999989999999987664 3444444443
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.84 E-value=1.2e-20 Score=177.00 Aligned_cols=277 Identities=12% Similarity=0.083 Sum_probs=198.4
Q ss_pred hccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC------------
Q 008957 165 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 232 (547)
Q Consensus 165 ~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------------ 232 (547)
+...+|+.++++-++.|.|.+...+..+.++++..+++++.+.+++.+.++++|..++|++++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999999999999999999999999999999999999999999999977631
Q ss_pred ----CCchhHHHHHHHHHHHHHHHHHhhc-cCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccc
Q 008957 233 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 307 (547)
Q Consensus 233 ----~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (547)
.+||++|++.+.+.++..+++.+.. ||... ++.+... + + +.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~~------------------~--~-------~~-- 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARVS------------------S--G-------DT-- 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccccc------------------c--c-------cc--
Confidence 3699999988777666655544432 33110 0000000 0 0 00
Q ss_pred cchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEee--ccCchhhH-hhhhhhccccccccee
Q 008957 308 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 384 (547)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 384 (547)
...+..+++|.++...+..+++.....++..|.+.|+.+. ++.++... ........+.++|+++
T Consensus 131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0012345678888888888888888999999999999754 46665443 4556778899999999
Q ss_pred eeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHH
Q 008957 385 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 464 (547)
Q Consensus 385 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~ 464 (547)
++++.||++++ +.+..+..++.+..++....++.. ....+.+.+++.+..+|.......+..++ ..+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence 99999999987 455554444444443333333322 33455567788888888888888777655 355666664
Q ss_pred HHHHHhhcCCCccchhhhhhcccchhHHHHHHHH
Q 008957 465 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 498 (547)
Q Consensus 465 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 498 (547)
..... |+++.|.+.|.+.|..| .+.++++..
T Consensus 271 -~~~~~-Gg~i~P~l~G~lad~~g-~~~a~~v~~ 301 (310)
T TIGR01272 271 -CLAIV-GGAIVPLLQGSLADCLG-IQLAFALPV 301 (310)
T ss_pred -HHHHh-cchHHHHHHHHHHHhcc-chHHHHHHH
Confidence 44444 88999999999999876 556665433
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=9.9e-20 Score=181.72 Aligned_cols=328 Identities=10% Similarity=-0.002 Sum_probs=206.1
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc----CCcee-hHHHHHHHHHHHHhh-hc----ccc--HHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH----NPFRL-IGVGLSVWTFATAGC-GS----SFD--FWSI 173 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~-l~~~~~~~~~~~~~~-~~----a~~--~~~l 173 (547)
..+.+.+|++..++|.+.+...+..++..++.|+++||. ||||. ++++.+...+..++. .. +++ .+.+
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 456777899999999999999999999999999999996 66664 455655454444332 21 222 2334
Q ss_pred HHHHHHhhhhhhhhhhcccccccccCCC-CCcchhhhHHHHh-----hhhhhhhhhhhHHhhcCCC--CchhHHHHHHHH
Q 008957 174 AICRMLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMC-----IPTGVALGYVYGGVVGSHL--NWRYAFWGEAIL 245 (547)
Q Consensus 174 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~ 245 (547)
++.-++.+++.+...+...++..+..++ ++|.+..++-..+ ..+|..++|.+++...+.. +|.....+.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~ 192 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIA 192 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 4455677888888887777777777654 6788876665543 3345556666665432211 122122233333
Q ss_pred HHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHh
Q 008957 246 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 325 (547)
Q Consensus 246 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (547)
+++..++.+...||.... ++++ .+..+.++.
T Consensus 193 ~~~~~~~~~~~~~e~~~~----~~~~---------------------------------------------~~~~~~~~~ 223 (448)
T PRK09848 193 GMVLYFICFKSTRENVVR----IVAQ---------------------------------------------PSLKISLQT 223 (448)
T ss_pred HHHHHHHHHcCcEeccCC----CccC---------------------------------------------CCHHHHHHH
Confidence 333333333333332110 0000 011245678
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhh-cccccccceeeeeeeecccccchhHHHHHH
Q 008957 326 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVT-IVCGIVGTISGGFILDQMGATISNAFKLLS 404 (547)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 404 (547)
++++|.++...+..++..........+.|.|.++..+.+.....+.... .++.+++.++.+++.||+++| +.+.
T Consensus 224 l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~ 298 (448)
T PRK09848 224 LKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFL 298 (448)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHH
Confidence 8999999998888888888878888888889988887765433332222 455677888899999999988 5655
Q ss_pred HHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhcCccceeeeecccCC-------cchhHHHHHHHHHHHhhcCCC
Q 008957 405 AATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVP 475 (547)
Q Consensus 405 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~g~~~~~~~~~g~~~ 475 (547)
.+..+..+.++..... .+.+...+...+.+++.+...+.......+..+. +.+|...|+.+....+ |..+
T Consensus 299 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl-g~ai 377 (448)
T PRK09848 299 IGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC-GQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-HHHH
Confidence 5555544444333332 2344444445556666666666666666665554 2458888998776666 8888
Q ss_pred ccchhhhhhcccc
Q 008957 476 SSPLVGVLQDHVN 488 (547)
Q Consensus 476 ~~~~~g~l~~~~~ 488 (547)
++.+.|.+.+..|
T Consensus 378 g~~i~g~~l~~~G 390 (448)
T PRK09848 378 GGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHcC
Confidence 9888888866543
No 112
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=3.6e-20 Score=183.62 Aligned_cols=331 Identities=15% Similarity=0.127 Sum_probs=249.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh----hcCCce-ehHHHHHHHHHHHHhhhcc-c-------cHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFR-LIGVGLSVWTFATAGCGSS-F-------DFWS 172 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~a-~-------~~~~ 172 (547)
+...+.+|+++...|.+..+..+-.++..++.|.++| |+|||| .+++|.+..+++.++.... + ....
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 5567778999999999999999999999999999999 899665 5667888888888877765 4 2334
Q ss_pred HHHHHHHhhhhhhhhhhcccccccccCC-CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-------CCchhHHHHHHH
Q 008957 173 IAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAI 244 (547)
Q Consensus 173 l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~ 244 (547)
+++.-++..++.........++..|..+ +++|.+..+.-..+..+|.++...+.+.+.+. .+|++..++.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 5667777788999888889999999998 57899999999999999887666666554421 169999999999
Q ss_pred HHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhH
Q 008957 245 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 324 (547)
Q Consensus 245 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (547)
+.++..++.++..+|...... ++ ++..+..+.++
T Consensus 186 v~~v~~~i~~~~~ke~~~~~~--~~--------------------------------------------~~~~~~~~~~~ 219 (428)
T PF13347_consen 186 VGLVFFLITFFFVKERSVEVT--EQ--------------------------------------------EKKISLRDSLR 219 (428)
T ss_pred HHHHHhhhhhheeeecccccc--cc--------------------------------------------ccccccccchh
Confidence 998888888877766111100 00 00112225577
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHH
Q 008957 325 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 404 (547)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 404 (547)
.++++|.++...+..++............+.|.+...+.+.....+..+..++++++.++.++++||+|+| +...
T Consensus 220 ~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~ 294 (428)
T PF13347_consen 220 SLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYI 294 (428)
T ss_pred hhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehh
Confidence 88899999988888888877777777777777777666664334445566788888999999999999999 5666
Q ss_pred HHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhcCccceeeeecccCC-------cchhHHHHHHHHHHHhhcCCC
Q 008957 405 AATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVP 475 (547)
Q Consensus 405 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~g~~~~~~~~~g~~~ 475 (547)
.+..+.+...++.... ++.+...+...+.+.+.+..+........|..+. +..|...|+.+..... +..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~-~~~l 373 (428)
T PF13347_consen 295 IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI-GQGL 373 (428)
T ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH-HHHH
Confidence 6666666655555544 4778888888888888888888888888887763 3457888888777776 7788
Q ss_pred ccchhhhhhcccc
Q 008957 476 SSPLVGVLQDHVN 488 (547)
Q Consensus 476 ~~~~~g~l~~~~~ 488 (547)
++.+.+.+.+..|
T Consensus 374 a~~i~g~~l~~~G 386 (428)
T PF13347_consen 374 AGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHhC
Confidence 8888888866543
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=5.2e-20 Score=169.11 Aligned_cols=347 Identities=14% Similarity=0.097 Sum_probs=272.7
Q ss_pred ccchhHHHHHHHHHHhhhhhhhhhhhhhcCCce-ehHHHHHHHHHHHHhhhcccc--HHH-HHHHHHHhhhhhhhhhhcc
Q 008957 116 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFD--FWS-IAICRMLVGVGEASFISLA 191 (547)
Q Consensus 116 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~a~~--~~~-l~~~r~l~G~~~~~~~~~~ 191 (547)
.+..+...++..+..++.+++.|.++|+.|+|| .+-+...+..++.++..++++ ++. .++.-.+..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 456788899999999999999999999999665 455555666666777777665 544 4556677788888888999
Q ss_pred cccccccCCCCCcchhhhHHHHhhhhhhhhhhhhH--Hhh-c---------------CCCCchhHHHHHHHHHHHHHHHH
Q 008957 192 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVV-G---------------SHLNWRYAFWGEAILMLPFAVLA 253 (547)
Q Consensus 192 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l-~---------------~~~gwr~~f~~~~~~~~~~~~~~ 253 (547)
.+++.+..++++-++..++-.....+|.++.-++. ..+ . +...-|..+.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999888888877777777776655442 111 1 23457888999998888888888
Q ss_pred HhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhH
Q 008957 254 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 333 (547)
Q Consensus 254 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (547)
++..|+..+... +. .+......++.+.+++++.+++.+.
T Consensus 217 ~~~v~~~~~~~~-~~----------------------------------------~~~l~~g~k~L~~t~k~i~~~~~i~ 255 (438)
T COG2270 217 ILNVHDAEKISS-PP----------------------------------------PTALRNGFKELKSTFKEIRGRKNLV 255 (438)
T ss_pred Hhcccccccccc-cc----------------------------------------hHHHHHHHHHHHHHHHHHhcccchH
Confidence 887766433210 00 0112255667778889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHH
Q 008957 334 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 412 (547)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 412 (547)
...++.+++.-+.+.+..+...|....++.+.... .+.....+.+++|+++.|++.||++.| +++..+.++...
T Consensus 256 ~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~ 330 (438)
T COG2270 256 LFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSI 330 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHH
Confidence 99999999998999999999999998899987666 445666789999999999999999999 677777777777
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHH
Q 008957 413 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 492 (547)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 492 (547)
.++...+......+.++..+.+.+.+..++..-++..+.+|+++-++..|+++..... +.++||++.+.+.+.+|+.+.
T Consensus 331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra-~S~~gp~lv~v~t~iTg~~r~ 409 (438)
T COG2270 331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA-ASFLGPFLVAVITQITGSSRA 409 (438)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH-HHHHHHHHHHHHHHHhcchhh
Confidence 7777777777777777778888888888888899999999999999999999877777 889999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 008957 493 TTLALTSIFFLAAGIWF 509 (547)
Q Consensus 493 ~~~~~~~~~~~~~~~~~ 509 (547)
.+....++..++.++..
T Consensus 410 g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 410 GVLSIIVLLLIGLLLLL 426 (438)
T ss_pred HHHHHHHHHHhhHhhEE
Confidence 88777777666665544
No 114
>PRK11462 putative transporter; Provisional
Probab=99.80 E-value=1.5e-18 Score=172.49 Aligned_cols=327 Identities=13% Similarity=0.020 Sum_probs=199.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh----cCCce-ehHHHHHHHHHHHHhhhcccc------HHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIA 174 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~------~~~l~ 174 (547)
....+.+|+++..+|.+..+.-+--++.-++.|.++|| +|||| .++++.+..+++.+++-..++ +..++
T Consensus 34 ~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~ 113 (460)
T PRK11462 34 FFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAA 113 (460)
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 34556789999999999999999999999999999995 78765 556677777777776654442 34455
Q ss_pred HHHHHhhhhhhhhhhcccccccccCC-CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-------CCchhHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILM 246 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~ 246 (547)
+.-++..++.......-.++..|..+ ++||++..++...+..+|..+++.+...+... .+|+....+.+++.
T Consensus 114 ~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~ 193 (460)
T PRK11462 114 ITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVA 193 (460)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 56666788888888888899999987 68999999999999999888877665443322 36888888887777
Q ss_pred HHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhh
Q 008957 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (547)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (547)
+++.++.++..+|..+. ++++ .+..+.++..
T Consensus 194 ~i~~~i~~~~~kE~~~~----~~~~---------------------------------------------~~~~~~l~~~ 224 (460)
T PRK11462 194 FMMLAFCFFTTKERVEA----PPTT---------------------------------------------TSMREDLRDI 224 (460)
T ss_pred HHHHHHHHhcceeccCC----CccC---------------------------------------------CCHHHHHHHH
Confidence 66666555544442110 0000 0012456777
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHH
Q 008957 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (547)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (547)
++|+.++.+....++..............|.+...+.......+.....++.+++.++++++.||+++| ......
T Consensus 225 ~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~~~ 299 (460)
T PRK11462 225 WQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFWWT 299 (460)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHH
Confidence 888888776655544444433332222223332233332222333455677788889999999999987 443322
Q ss_pred HHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhcCccceeeeecccC-----Ccch--hHHHHHHHHHHHhhcCCCcc
Q 008957 407 TFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-----PSLR--ALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 407 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~r--~~~~g~~~~~~~~~g~~~~~ 477 (547)
..+..+..++.... .+.....+..++.+++.+...+....+..+..+ +..| |...+.......+ |..+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl-g~alg~ 378 (460)
T PRK11462 300 NALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL-GLAFGG 378 (460)
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH-HHHHHH
Confidence 22222212222222 222223333344444443333322333343333 2233 4444555455566 777788
Q ss_pred chhhhhhccc
Q 008957 478 PLVGVLQDHV 487 (547)
Q Consensus 478 ~~~g~l~~~~ 487 (547)
.+.|++.+..
T Consensus 379 ~i~g~iL~~~ 388 (460)
T PRK11462 379 ALIGWMLAYG 388 (460)
T ss_pred HHHHHHHHHc
Confidence 8888776543
No 115
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.80 E-value=1.2e-19 Score=170.98 Aligned_cols=353 Identities=15% Similarity=0.115 Sum_probs=228.1
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHH--HHH-Hhhhcc----ccHH-HHHHHHH
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT--FAT-AGCGSS----FDFW-SIAICRM 178 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~--~~~-~~~~~a----~~~~-~l~~~r~ 178 (547)
-+.++.|+|.+++|.+.++..+...+.+++.|.++||+|.||-++..+.+.. .+. +...+. .|++ ..+++-+
T Consensus 33 WL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i 112 (412)
T PF01306_consen 33 WLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGI 112 (412)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTT
T ss_pred HHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555689999999999999999999999999999999997776554432221 122 222222 2332 2233333
Q ss_pred HhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
..|++.....|+.-+++.++. ++.+.=.|-.-+..++|.+++..++|.+.+ .+-+..||+....+++..++.++..|
T Consensus 113 ~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~ 189 (412)
T PF01306_consen 113 YLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKP 189 (412)
T ss_dssp TTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS--
T ss_pred HHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 345445555566666665554 234555677788888999999999998886 34567888877766666665555544
Q ss_pred CccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHH
Q 008957 259 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 338 (547)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (547)
+.++.....+..+.. +.+...++..+++|+|.+|.+.+.
T Consensus 190 ~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~l~k~~~fw~~~l~ 228 (412)
T PF01306_consen 190 DVPPQAEVADALGAK-----------------------------------------KDKVSLKDVLSLFKMRNFWFFVLF 228 (412)
T ss_dssp -SSSSS-SSTTSSS-----------------------------------------------HHHHHHHTTSHHHHHHHHH
T ss_pred cCchhhhhhcccccC-----------------------------------------CCCCcHHHHHHHhcchhHHHHHHH
Confidence 422221111100000 000012446688999999998887
Q ss_pred HHHHHHHHHHHhhhccceeEeeccCch----hhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHH
Q 008957 339 YIAYNFVIGAYSYWGPKAGYNIYHMSN----ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 414 (547)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 414 (547)
.......+..+-...|.|....+.... .-..+.++..+..++...+..++.+|+|.| +.++++..+..+=.
T Consensus 229 v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~Lllag~i~~iRi 303 (412)
T PF01306_consen 229 VIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLLLLAGVIMAIRI 303 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHHHHHHHHHHHHH
Confidence 666666666665445555554333321 112344566678888888999999999999 78888777777777
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHH
Q 008957 415 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 494 (547)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 494 (547)
.+....++.+.....-.+-++-.........-++.+..+++..++...+...+...+|.++.+.+.|.+.|+.| ++.+|
T Consensus 304 ~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~ty 382 (412)
T PF01306_consen 304 IGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTY 382 (412)
T ss_dssp HHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHH
Confidence 77777788888777777777777777777788888889999999998886544444487888889999999986 77788
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 495 LALTSIFFLAAGIWF 509 (547)
Q Consensus 495 ~~~~~~~~~~~~~~~ 509 (547)
++++.+.+...++..
T Consensus 383 limg~iv~~~~li~~ 397 (412)
T PF01306_consen 383 LIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhe
Confidence 888877665555444
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.6e-16 Score=149.93 Aligned_cols=332 Identities=10% Similarity=0.018 Sum_probs=240.2
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh----cCCc-eehHHHHHHHHHHHHhhhcccc------HHHHHH
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIAI 175 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~~~l~~ 175 (547)
...+.+|+++...|.+..+--+--++.-|+.|.+.|| +||+ +.++.+.+..++.+.++-.+++ ....++
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 3566789999999999999999999999999999994 7755 4677788999998888877763 445566
Q ss_pred HHHHhhhhhhhhhhcccccccccCC-CCCcchhhhHHHHhhhhhhhhhhhhHHhhc-----C--CCCchhHHHHHHHHHH
Q 008957 176 CRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVG-----S--HLNWRYAFWGEAILML 247 (547)
Q Consensus 176 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-----~--~~gwr~~f~~~~~~~~ 247 (547)
.-++.+++.......-.++.+|+.+ ++||.+..++-+.+.++|..+...+...+. + ..||+..-.+.+++++
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 7788889999888888999999986 688999999999999999776655554443 2 4589999999988888
Q ss_pred HHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhc
Q 008957 248 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 327 (547)
Q Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (547)
+..+.+++-.+|......+.++ ...++....+..++
T Consensus 198 i~~l~~~~~v~ER~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~ 233 (467)
T COG2211 198 ILLLFCFFNVKERVVETQPTKT--------------------------------------------GVKLKLKDSFLLIF 233 (467)
T ss_pred HHHHHHHHHhhcccCccccCcc--------------------------------------------cccccHHHHHHHHH
Confidence 8888888776653331110000 00111224456788
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHH
Q 008957 328 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (547)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (547)
+|+.+...++..++..............|.+...+.+.... ........+.+++.++..++.+|+|+| ++..++
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~ 308 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIG 308 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHH
Confidence 99999998888888887777777777888877766664333 333444455666688899999999999 777777
Q ss_pred HHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhcCccceeeeecccCC-------cchhHHHHHHHHHHHhhcCCCcc
Q 008957 407 TFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 407 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
.++.++..++..+.+ +....++..++.+++.+...+...+.+.+.++- +.-|...|....+... |.+++.
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~-g~ala~ 387 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL-GLALAG 387 (467)
T ss_pred HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH-HHHHHH
Confidence 777777766666554 445555555667777777766666666654432 3456677777666666 888888
Q ss_pred chhhhhhcccc
Q 008957 478 PLVGVLQDHVN 488 (547)
Q Consensus 478 ~~~g~l~~~~~ 488 (547)
.+.|++.+..|
T Consensus 388 ~~~g~~L~~~G 398 (467)
T COG2211 388 FIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHcC
Confidence 88888876544
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.72 E-value=2.6e-16 Score=148.34 Aligned_cols=392 Identities=12% Similarity=0.107 Sum_probs=225.7
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGE 184 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~ 184 (547)
..+.+|+++++..-+.++|..-.-+..+++|+++||+ |+|++++.|.+++.+|.++.+.++ +...++++-.+.++|.
T Consensus 52 ~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~ 131 (498)
T COG3104 52 LGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGT 131 (498)
T ss_pred ccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcc
Confidence 3444669999998888988888889999999999997 999999999999999999999884 7889999999999999
Q ss_pred hhhhhcccccccccCCCC--CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 185 ASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
|..-+...++++|.+|++ +|-..+++++++.++|+.++|++.+++.+.+||...|.+.++-.....+..+ +.+....
T Consensus 132 Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~-~~~r~~~ 210 (498)
T COG3104 132 GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL-LGRRHVK 210 (498)
T ss_pred ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH-Hccchhc
Confidence 999999999999999863 4778899999999999999999999999999999999988776655444444 3333322
Q ss_pred CCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhh----------------hhhhhhhhhhhHhh
Q 008957 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRF----------------LNQLSQFSQDTKVL 326 (547)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~ 326 (547)
.....+++............. . -........ .......+..... ....+.. +..+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~-~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~er~r~ 283 (498)
T COG3104 211 GIGGVPDPNPLSFNFLLPVLG--G---LVVMILAAL-LTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF-DERRRL 283 (498)
T ss_pred CCCCCCCccchhhhhhhhhHH--H---HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH-HHHHHH
Confidence 221111111110000000000 0 000000000 0000000000000 0000000 000111
Q ss_pred c-ccchhHHHHHHHHHHHHHHHHHhhhccceeEee-ccCchhhHhhhhhhcccccccceeeeeeeeccccc--ch-hHHH
Q 008957 327 L-QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT--IS-NAFK 401 (547)
Q Consensus 327 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~-~~~~ 401 (547)
+ --+.+....+.+.++......+..+.-...... ++.+.....+.++..+.-++..++..++..+.+++ .+ ...+
T Consensus 284 ~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~K 363 (498)
T COG3104 284 LAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIK 363 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchH
Confidence 0 011222222222333333333344433333333 33332233444555555555555556665664333 22 1223
Q ss_pred HHHHHHHHHHHHHHHHHH---h------hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhc
Q 008957 402 LLSAATFLGAISCLTAFC---L------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (547)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (547)
.-+...+.++..+++... . .+.++.+...++..++--+..+.....+....|+...+..++.... .+..|
T Consensus 364 FalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfL-t~a~~ 442 (498)
T COG3104 364 FALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFL-TVAAG 442 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHH-HHHHH
Confidence 333333333333333222 1 2456666677777777777778888888899999999999998744 33336
Q ss_pred CCCccchhhh------hhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 473 DVPSSPLVGV------LQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 473 ~~~~~~~~g~------l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
..++..+.+. ..+.. .....|...+...++.....+
T Consensus 443 ~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 443 QTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHH
Confidence 6665555552 22221 233556666665554444433
No 118
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.69 E-value=8e-17 Score=153.68 Aligned_cols=185 Identities=16% Similarity=0.138 Sum_probs=146.7
Q ss_pred CchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCcccccccccc-ccccCccchhHHHHHHHHHHhhhhhhhhhh
Q 008957 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQG-DFKLNNFQDGVLSSAFMVGLLVASPIFASL 140 (547)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 140 (547)
.+||.+.++.+..++.....+++... ..|.+++ |.+.+.+..|++.++..+|.+++++.+|..
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s----------------~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~W 94 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTS----------------MWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIW 94 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEee----------------cchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccc
Confidence 34567777777777776666655421 1245544 577888899999999999999999999999
Q ss_pred hhhcCC-ceehHHHHHHHHHHHHhh-hc---cc-cHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHh
Q 008957 141 AKSHNP-FRLIGVGLSVWTFATAGC-GS---SF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 214 (547)
Q Consensus 141 ~dr~Gr-r~~l~~~~~~~~~~~~~~-~~---a~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 214 (547)
..|.+. |+.++.|.++..+|+++. ++ .+ ..+.++++|++.|+|.+ ......+|+++....++|.++++....+
T Consensus 95 s~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~ 173 (488)
T KOG2325|consen 95 SNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGG 173 (488)
T ss_pred ccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhH
Confidence 999986 888999999999999887 32 34 67889999999999987 4566889999998889999999999999
Q ss_pred hhhhhhhhhhhHHhhcCC--CC-----------chhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 215 IPTGVALGYVYGGVVGSH--LN-----------WRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 215 ~~~G~~~g~~l~~~l~~~--~g-----------wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
..+|.++||.++..+..- -| +..+-|+.+++.++..+..+++.+|..+.
T Consensus 174 ~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 174 FVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 999999999888766521 11 34667888888888888888887775544
No 119
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=2.4e-16 Score=130.48 Aligned_cols=138 Identities=29% Similarity=0.388 Sum_probs=126.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCC
Q 008957 122 LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 201 (547)
Q Consensus 122 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 201 (547)
+.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..++++++.+++.+++.|++.+...+....++.|.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 202 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 202 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
++|++..++.+....+|..+++.+++.+.+..+|++.|++.++..++..+..+++.||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999998999999999998888777777766654
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.63 E-value=3e-14 Score=132.05 Aligned_cols=330 Identities=13% Similarity=0.037 Sum_probs=222.5
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC-----Ccee-hHHHHHHHHHHHHhhhc-----cc-------
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRL-IGVGLSVWTFATAGCGS-----SF------- 168 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~-----a~------- 168 (547)
-+..|++++....+.+.+...+... ..+.+|+.+|+.+ ||.. +..|.++...+..+..+ +.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 4667899999999999998888775 5888999999998 7754 55566666665555443 22
Q ss_pred cH--H--HHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHH
Q 008957 169 DF--W--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 244 (547)
Q Consensus 169 ~~--~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 244 (547)
+. + ...+.-.+.|+|.+...+...++++|..|+++|+++.++...+.-+|.+++..+.+.+.+.+.-.-...+...
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 22 2 2344566779999999999999999999999999999999999999999999999988876653322222222
Q ss_pred HHHHHHHHHHhhc--cCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhh
Q 008957 245 LMLPFAVLAFVIK--PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 322 (547)
Q Consensus 245 ~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (547)
..++..++...-. .|.+.....+.++ +...++.+.
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~~~~-------------------------------------------~~~~~f~~a 200 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAAAAE-------------------------------------------RPRPPFREA 200 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCcccccCCC-------------------------------------------CCCccHHHH
Confidence 2222222222211 2211111010000 001122355
Q ss_pred hHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeee-cccccchhHH
Q 008957 323 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD-QMGATISNAF 400 (547)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~ 400 (547)
++++..+|....+....+.....++.--..+-.|.-+.++++..+. .++.....+..+|....|++.. |.+++
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~----- 275 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK----- 275 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----
Confidence 6677788888887777777777777777778888888899986443 5666667778888888888766 44444
Q ss_pred HHHHHHHHHHHHHHH---HHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCcc
Q 008957 401 KLLSAATFLGAISCL---TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 401 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
+....++..++.++. +.....+.+.+....++.|++.+.........+++...++..|..+|.-...+.. +..++.
T Consensus 276 ~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~-A~Glg~ 354 (403)
T PF03209_consen 276 RTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI-ARGLGT 354 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH-HHHHHH
Confidence 333333333333332 2333456777777888888888877777777888888888999999987655554 667777
Q ss_pred chhhhhhcc
Q 008957 478 PLVGVLQDH 486 (547)
Q Consensus 478 ~~~g~l~~~ 486 (547)
.++|.+.|.
T Consensus 355 ~~GG~~~D~ 363 (403)
T PF03209_consen 355 FLGGALRDL 363 (403)
T ss_pred HHHHHHHHH
Confidence 788877763
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.56 E-value=1.4e-13 Score=133.90 Aligned_cols=318 Identities=13% Similarity=0.107 Sum_probs=211.9
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh--hhhhhhhcccccccccCCCC
Q 008957 125 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV--GEASFISLAAPFIDDNAPVP 202 (547)
Q Consensus 125 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~--~~~~~~~~~~~~i~~~~~~~ 202 (547)
...+...+.++..|.++||+|||..+....+...+..+...+.. +|.+ + +.|+ +.+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~-~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFF-L---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHh-h---hcccccchhhhhhhhhhheeeccchh
Confidence 34677888999999999999999999999999988888877766 3333 3 4443 23346677889999999999
Q ss_pred CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCCCCCCC-ccccccccccccC
Q 008957 203 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE-SGKAQVVASVSEG 281 (547)
Q Consensus 203 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~ 281 (547)
+|...+++.+..+..+..++|.+++.+....|.-.+|++..+..++..+...+..||+......+. ..+.. .
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~----~--- 217 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL----T--- 217 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc----C---
Confidence 999999999999999999999999999999999999999999999988888888888665433221 00000 0
Q ss_pred CcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHH-HHhhhccceeEee
Q 008957 282 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG-AYSYWGPKAGYNI 360 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~ 360 (547)
.... .. ....+..+..+..-.+|..+.+.+..+....... ...-..+.|+...
T Consensus 218 --~~~~------------~~------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~ 271 (463)
T KOG2816|consen 218 --PGSL------------DS------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK 271 (463)
T ss_pred --CCcc------------cc------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee
Confidence 0000 00 0001111222222234444444443333333322 2232447788888
Q ss_pred ccCchhhH-hhhhhhcccccccceeee-eeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 008957 361 YHMSNADM-MFGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (547)
Q Consensus 361 ~~~~~~~~-~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (547)
++++.... .+.+.....+.++.++.. .+...++.+ ..+..+...-........+....|...... +...+..
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~-v~~~~~~ 345 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAG-VVVALAG 345 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHH-HHHHhhc
Confidence 88887665 344555566666666665 556667776 544444444444444444445555443333 3334445
Q ss_pred hcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 439 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
...+...+.......++.+|++.++...+... ...++|.+.+.+...+
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l-~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGL-SGVVSPALYGNIFALT 393 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHH-hhhhhHHHHHHHHHHH
Confidence 66677777888888899999999999777776 7678898888886544
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.56 E-value=7.5e-15 Score=144.02 Aligned_cols=343 Identities=13% Similarity=0.062 Sum_probs=207.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC-----CceehHHHHHHHHHHHHhhhcc----ccHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRLIGVGLSVWTFATAGCGSS----FDFWSIAIC 176 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~a----~~~~~l~~~ 176 (547)
+.+++++|+++.+.....+...+...+ -+++|.++|.+. ||+-++++.++.+++.+..+.. .+.....++
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 778999999999999999988888855 566799999763 5556677777776655555442 356677778
Q ss_pred HHHhhhhhhhhhhcccccccccCC--CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 008957 177 RMLVGVGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 177 r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
-++..+|.+....++-+++.|... +++||...+.......+|.+++..++|.+.+..++|+.|.+.+++..+..+..+
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~ 172 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH
Confidence 888899999999999999999984 344788888888999999999999999999999999999999988888777777
Q ss_pred hhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHH
Q 008957 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (547)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (547)
++.+| .+.....+..... ++ + ........++.....+..++.+.++.
T Consensus 173 ~~~~e-~~~~~~~~~~~~~-------------------~~-~------------~~~~~~~~~~~~~~l~~~~~~~~i~~ 219 (433)
T PF03092_consen 173 FLLEE-RKVRPADEVFSFG-------------------KE-E------------VPCLFGSFREQLSELWRALQQRAIWQ 219 (433)
T ss_pred Hhhhh-ccccccchhhccc-------------------cc-c------------cchhhHHHHHHHHHHHHHHhhhHHHH
Confidence 77665 1111110000000 00 0 00000112333455566777777776
Q ss_pred HHH-HHHHHHHHHHHHhhhccceeEeecc---CchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHH
Q 008957 335 NVL-GYIAYNFVIGAYSYWGPKAGYNIYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 409 (547)
Q Consensus 335 ~~~-~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 409 (547)
..+ ..++.......-....-.+..+..+ +++.-. .+..+..++.++|..+ -.++.++...| .++....++
T Consensus 220 ~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~----y~~~~~~~~~R-~~~~~t~~~ 294 (433)
T PF03092_consen 220 PILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILL----YRKYFSNWSWR-RIFVVTTLV 294 (433)
T ss_pred HHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHH----HHHHHhCCCHH-HHHHHHHHH
Confidence 655 2222222211110101112222233 333222 1122223344444443 33433332221 444444443
Q ss_pred HHHHHHHHHH----------hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccch
Q 008957 410 GAISCLTAFC----------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 479 (547)
Q Consensus 410 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~ 479 (547)
.....+.-.. .++.+..+.--.+........+.+......+..|+..-|+..++..++.|+ |..++..+
T Consensus 295 ~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s~~l 373 (433)
T PF03092_consen 295 SVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVSSTL 373 (433)
T ss_pred HHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHHHHH
Confidence 3333222110 111122223334444455556666777888999999999999999888888 77777777
Q ss_pred hhhhhcccc
Q 008957 480 VGVLQDHVN 488 (547)
Q Consensus 480 ~g~l~~~~~ 488 (547)
+..+.+..+
T Consensus 374 g~~l~~~~~ 382 (433)
T PF03092_consen 374 GAFLMELFG 382 (433)
T ss_pred HHHHHHHcC
Confidence 777765544
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=2.6e-14 Score=140.78 Aligned_cols=146 Identities=16% Similarity=0.210 Sum_probs=128.7
Q ss_pred ccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc----cHHHHHHHHHHhhhhhhhhhhcc
Q 008957 116 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLA 191 (547)
Q Consensus 116 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~----~~~~l~~~r~l~G~~~~~~~~~~ 191 (547)
..+.+...++..++..++.++.|+++||+|||++++++.++.+++..+...+. +++.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 36679999999999999999999999999999999999999998877666532 24667889999999999888888
Q ss_pred cccccccCCCCCcchhhhHHH-HhhhhhhhhhhhhHHhhcCC------CCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 192 APFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 192 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
..++.|++|+++|++++++.+ ...++|.++||+++|++.++ +||++.|++.+++.++.+++.+++.+|+.
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999997 67889999999999999876 57999999999999998888888887653
No 124
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.51 E-value=1.1e-13 Score=135.61 Aligned_cols=149 Identities=15% Similarity=0.094 Sum_probs=126.0
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 186 (547)
.+++++|.+..+.+++.+...++..++.+++|+++||+|||+.+..+.+...+......++++.+.+++.+++.+++.+.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 45677899999999998888888889999999999999999988887766666555555677888888899999888887
Q ss_pred hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
..+....+..|..|+ +|++++++++...++|..+++.+++.+.++.||++.|++.+++.++..++.++.
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 777777888899886 599999999999999999999999999998999999998888777766555544
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.49 E-value=1.6e-13 Score=138.42 Aligned_cols=155 Identities=10% Similarity=0.033 Sum_probs=118.8
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHh---hhccccHHHHHHHHHHhhhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~a~~~~~l~~~r~l~G~~~ 184 (547)
+.+++|.+..+.++..+...++..++.+..|+++||+|||+.++++.++..++.+. ...+++...++++|++.|++.
T Consensus 277 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 356 (490)
T PRK10642 277 LSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVIL 356 (490)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 45678888888888888899999999999999999999999988887654443322 223456788888999999887
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC-CchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
+........++.|.+|++.|+.++++.+....++..++|.+.+++.+.. +|+.++++..+++++..+..+ +.||+++.
T Consensus 357 ~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~ 435 (490)
T PRK10642 357 NCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCC
Confidence 7777777888899999999999999754445555678888888877654 478887777776666655544 44777654
No 126
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.49 E-value=9.9e-13 Score=120.10 Aligned_cols=234 Identities=12% Similarity=0.086 Sum_probs=155.0
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 187 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~ 187 (547)
+-+++|.+..|++.+....+...++...+.|.++||+|||+.-++-+++++++++ +-..++++.++++|++.|++.+..
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHH
Confidence 4468999999999999999999999999999999999999999999999999886 555689999999999999999999
Q ss_pred hhcccccc-cccCC----CCCcchhhhHHH-HhhhhhhhhhhhhHHhhcCCCC--chhHHHHHHHHHHHHHHHHHhhccC
Q 008957 188 ISLAAPFI-DDNAP----VPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 188 ~~~~~~~i-~~~~~----~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
+.+-.+++ .|.-. ++..+..++... ..+++-.+++.+++.++.+..+ -.++|....++.++..++....-+|
T Consensus 139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 88877764 44422 222222222222 2223334455556666665554 4788988877777666665544444
Q ss_pred ccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHH
Q 008957 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (547)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (547)
.... +.+.+ +..++..+.++.++++|+++.+.+..
T Consensus 219 Nyg~---~~~~~------------------------------------------~~~~~~~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 219 NYGD---TSSSS------------------------------------------SLSGSFREAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred cCCC---ccccc------------------------------------------chHHHHHHHHHHHHcCchhHHHHHHH
Confidence 2211 00000 11112234567788899999988888
Q ss_pred HHHHHHHHHHh-hhccceeEeeccCchhhHhhhhhhcccccccceeeeeee
Q 008957 340 IAYNFVIGAYS-YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFIL 389 (547)
Q Consensus 340 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 389 (547)
.++-...+.+. .|.|.+-.+..+. |. ..+...+.++..+|+.+..++.
T Consensus 254 slFE~smy~FVflWtPaL~~~~~~~-P~-GlIFssFM~a~MlGS~lf~~l~ 302 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPALDPDDEEL-PL-GLIFSSFMVAMMLGSSLFSRLL 302 (354)
T ss_pred HHHHHHHHHheeeeeceecCCCCCC-Cc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 88877766654 5777665221111 22 2333445566666666654433
No 127
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.49 E-value=1.5e-12 Score=122.36 Aligned_cols=352 Identities=10% Similarity=-0.005 Sum_probs=224.1
Q ss_pred cccccc-cccCccchh-HHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 106 SGIQGD-FKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
|.+.+. .|+|..|+. -+.-...-.+....++...+.|..|.|++++++.+...+..++.-+.++...+-+..++-|++
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence 556664 788888874 556677778888999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC--CCCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
.+. ..+-++++--..|+++-.++.+...++.-+|..++.++|..+.+ ..+.+...++......+..+ ..+++|..+
T Consensus 108 ~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~-~~~fLP~~~ 185 (412)
T PF01770_consen 108 TAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL-IALFLPMPK 185 (412)
T ss_pred HHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHcCCCC
Confidence 985 66688889888999999999999999999999999999988875 34456666655544444434 434445433
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccc-hhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ-ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (547)
+..--.++...... . .+.+... .++.++. .+.+...+..........+..+++++...++|.++...+-+.
T Consensus 186 ~S~~f~r~~~~~~~-~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa 257 (412)
T PF01770_consen 186 RSLFFHRKPPAEQD-A--NESESDK-----MNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWA 257 (412)
T ss_pred cccceeccCccccc-c--ccccccc-----cccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 22111111000000 0 0000000 0000000 011111111122222455677788888899999888888777
Q ss_pred HHHHHHHHHhhhccceeEee---ccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH
Q 008957 341 AYNFVIGAYSYWGPKAGYNI---YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 417 (547)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (547)
+...+++.+.+|......+. .+.+......-++..+.+.++.+..|++-.++.+... ..+....++.+...+++
T Consensus 258 ~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~---l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 258 FATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGE---LALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHH---HHHHHHHHHHHHHHHHH
Confidence 77777776666665544444 1111112233344445556666777777444444310 23344445555556666
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHh
Q 008957 418 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (547)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (547)
...++.|...+...+.........+....-++.....+.-|-..|+.+.+.-.
T Consensus 335 ~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~ 387 (412)
T PF01770_consen 335 SFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALV 387 (412)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHH
Confidence 66778888887777777776666665555566666667777777776444333
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.48 E-value=1.4e-13 Score=136.39 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=130.7
Q ss_pred cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcc
Q 008957 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLA 191 (547)
Q Consensus 112 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~ 191 (547)
.+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666788999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred cccccccCCCCCcchhhhH-HHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 192 APFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 192 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
..++.|.+|++.|+...+. ++....+|.++++.+.|++.+..|||..|++.+++.++..++.++..+
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999887665 677788999999999999999999999999998888777666665553
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.47 E-value=6.6e-14 Score=136.96 Aligned_cols=144 Identities=12% Similarity=0.019 Sum_probs=126.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccH--HHHHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~G~~ 183 (547)
+.+.++++.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++..++.++..+.++. ..+++..++.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 308 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT 308 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence 44567788888889999999999999999999999999999999999999999988887776643 3355677888888
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHH
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 249 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 249 (547)
.+...+....++.|.+|+++|+++.++.+....+|..++|.+++.+.++.||++.|++.+++.++.
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 888888888899999999999999999999999999999999999999999999999988766553
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.46 E-value=1.5e-13 Score=141.47 Aligned_cols=140 Identities=9% Similarity=-0.040 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccC
Q 008957 120 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 199 (547)
Q Consensus 120 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 199 (547)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+..++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45566778999999999999999999999999999999999999999999888889999999988889999999999999
Q ss_pred CCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 200 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 200 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
|.++|++++|+.++...+|.++||++++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 999999999999999999999999999987753 4567888887777666555554 47643
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=3.8e-13 Score=132.56 Aligned_cols=147 Identities=16% Similarity=0.136 Sum_probs=128.7
Q ss_pred cccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhh
Q 008957 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 110 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++.+++.|++.+...+
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 244 AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence 34454 3457777889999999999999999999999999999999998888888888988888999999999998888
Q ss_pred cccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
.....+.|.+|+++|+++.++++....+|..+++++.+.+.++.||++.|++.++..++..++.+++.+
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 888888899999999999999999999999999999999999899999999998888777666665543
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.43 E-value=1.1e-12 Score=130.10 Aligned_cols=155 Identities=17% Similarity=0.113 Sum_probs=138.1
Q ss_pred cccccc-cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|.+.++ +|.+..+.|++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.++++.++.|++.
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 326 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS 326 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 444455 8999999999999999999999999999999988888888988888888888888898888888999999999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
+...+...+++.|..|++.||++++++.....+|..+|+.+.|++.+..|++..+++.++..++..++.+...|+.
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 8887888889999999999999999999999999999999999999999999999999888877777777766653
No 133
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.43 E-value=4.4e-13 Score=129.76 Aligned_cols=150 Identities=19% Similarity=0.171 Sum_probs=138.9
Q ss_pred cccccc-cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCce-ehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+ .+..+.++..++.++..+.++.+.+++..++.|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~ 278 (352)
T cd06174 199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFG 278 (352)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 444444 4889999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHh
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|++.+++.+++.++..+..++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 279 LGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999999999999999899999999999988877665543
No 134
>PRK12382 putative transporter; Provisional
Probab=99.43 E-value=8.8e-13 Score=129.60 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=128.8
Q ss_pred cccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhh
Q 008957 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 110 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++.+...+
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 244 ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH
Confidence 444544 356677788888899999999999999999999999999999988888888988888999999999998888
Q ss_pred cccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
...+.+.|.+|+++||++.++++....+|..++|.+++++.++.||++.|++.+++.++..++.++..
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 88888999999999999999999999999999999999999999999999999988877776666543
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.42 E-value=7.9e-13 Score=129.26 Aligned_cols=148 Identities=11% Similarity=0.153 Sum_probs=127.4
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 186 (547)
.+.+++|.++.+.+++.+.......++.++.|++.||+|||+++.++.++..+..++..+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677899999999998888888888899999999999999999888877777666666778888888899999999998
Q ss_pred hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHh
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
..+....++.|..|++ +++++++++....+|..++|.+++.+.+..||+..|++.++..++..++..+
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 8888888999988764 6799999999999999999999999999899999999998877766665543
No 136
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.41 E-value=1.1e-12 Score=129.69 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhccccccccc
Q 008957 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 198 (547)
Q Consensus 119 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 198 (547)
.+.+.+++.++..++.+.+|++.||+|||+.+..+.++..++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45667777888889999999999999999999999998888888888888899999999999999999999999999999
Q ss_pred CCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
.|+++||+.+++++....+|..+||.+++.+.+..||++.|++.+++.++..+..++..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988887777666543
No 137
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.41 E-value=1.6e-12 Score=132.04 Aligned_cols=147 Identities=13% Similarity=0.071 Sum_probs=116.7
Q ss_pred cccc-cccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc--ccHHHHHHHHHHhhh
Q 008957 106 SGIQ-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGV 182 (547)
Q Consensus 106 ~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~ 182 (547)
|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++..++.++.... .+.+.+.+..++.+.
T Consensus 299 p~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (496)
T PRK03893 299 PTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM 378 (496)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 4444 6899999999999999999999999999999999999999988887777665544433 344445555555544
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHH
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 252 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 252 (547)
......+....++.|.+|+++|++++++.+....+|..+||++++.+.++.||++.+...+....+.+++
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~~ 448 (496)
T PRK03893 379 LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVIL 448 (496)
T ss_pred HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH
Confidence 4334456677889999999999999999999999999999999999999999999887666544443333
No 138
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.40 E-value=9.1e-13 Score=130.23 Aligned_cols=152 Identities=14% Similarity=0.059 Sum_probs=129.2
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
|.+.++.|.+..+.+.+.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.|++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV 323 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 56667789999999999999999999999999999999999999988877777777777778888888888889999888
Q ss_pred hhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC-CchhHHHHHHHHHHHHHHHHHhhc
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
...+...+++.|.+|+++|++.+++.+....+|..+||.+++.+.++. +|...+++.....++..+..++..
T Consensus 324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888999999999999999999999999999999999999998765 466666666655555555444443
No 139
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.39 E-value=9.3e-13 Score=128.67 Aligned_cols=145 Identities=14% Similarity=0.031 Sum_probs=130.9
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
|...+|+|.++.+.|++.+...++..++.++.+++.||+|+|+.+.++.++.++..++.++++|.+.+++.++++|++.+
T Consensus 229 ~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~ 308 (382)
T TIGR00902 229 AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA 308 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence 44446799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccccccCCCCCcchhhhHHH-HhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHH
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 252 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 252 (547)
...+....++.+. |+++|++..++++ ...++|.++|+.++|++.+++|+ ..|++.++++++..++
T Consensus 309 ~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 309 VCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999998 9889999999986 57889999999999999999996 6788887777654433
No 140
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.39 E-value=3.5e-13 Score=134.39 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=123.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc--CCceehHH--HHHHHHHHHHhhhccccHHHHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIGV--GLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (547)
|.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.++..++++++.+++.+++.|
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G 344 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG 344 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 555567899999999999999999999999999999984 33433333 34444555566677889999999999999
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC-CchhHHHHHHHHHHHHHH
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 251 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~ 251 (547)
++.+...+...+++.|.+|++++++.+++++....+|..+||.++|.+.+.. +|++.|++.+++.++..+
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877 599999999887665544
No 141
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=2.6e-12 Score=126.20 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=128.0
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 186 (547)
.+.+++|++..+.+++.+.+.++..++.+..|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+.
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 310 (394)
T PRK03699 231 YAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSA 310 (394)
T ss_pred HHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 34467899999999999999999999999999999999999999988888777777777778887877888899998888
Q ss_pred hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.++...++..|..|. ++++..+.......+|..++|.+.+++.+..||+..+++.+++.++..+.+...
T Consensus 311 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 311 IYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 888877788887764 477888999999999999999999999999999999999988877776655444
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.38 E-value=2.2e-12 Score=127.19 Aligned_cols=148 Identities=14% Similarity=-0.029 Sum_probs=113.8
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCcee--hH------HHHHHHHHHHHhhhccccHHHHHHHHH
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL--IG------VGLSVWTFATAGCGSSFDFWSIAICRM 178 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--l~------~~~~~~~~~~~~~~~a~~~~~l~~~r~ 178 (547)
.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+. .. .+.++..+........++.+..+...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 4556789999999999999999999999999999999999962 11 111111222222222334455554555
Q ss_pred HhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHHHh
Q 008957 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 255 (547)
+.+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |++.|++.++..++..+..++
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 321 LGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 5555555 788899999999999999999999999999999999999999999988 999999998887776665544
No 143
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.38 E-value=2e-12 Score=131.05 Aligned_cols=155 Identities=8% Similarity=-0.077 Sum_probs=125.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc-----cc------cHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SF------DFWSIA 174 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~------~~~~l~ 174 (547)
|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.++ .+ +...+.
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 6677888999888899999999999999999999999999999999998888887776652 11 233333
Q ss_pred HHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
...++.+.......+....++.|.+|+++|++++++.+....+|.++++.+.+.+.++.+|++.|++.++++++.+++.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 33333333333344666778899999999999999999999999999999999999888999999999998888888777
Q ss_pred hhccCc
Q 008957 255 VIKPLQ 260 (547)
Q Consensus 255 ~~~p~~ 260 (547)
++.||+
T Consensus 468 ~~~~~~ 473 (481)
T TIGR00879 468 FFLPET 473 (481)
T ss_pred eecccC
Confidence 776663
No 144
>PRK03545 putative arabinose transporter; Provisional
Probab=99.36 E-value=5.1e-12 Score=124.03 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=124.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHH-hhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+. ..+..+..++.. +....++.+.++++.++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 44566689999999999999999999999999999999998865 444444444443 3456678888888999999988
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
+...+.....+.+..| ++|++++++++....+|..+||+++|.+.+++|+|..|++.+++.++..+..++..
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 7777777778888776 57999999999999999999999999999999999999999988877777666554
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.34 E-value=5.3e-12 Score=126.79 Aligned_cols=150 Identities=12% Similarity=0.004 Sum_probs=117.7
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHH--hhhccccHHHHHHHHHHhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA--GCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~--~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
.+++++|++..+.++..+.+.++..++.+++|+++||+|||+.++....+..++.. +....++.+.+.+.+++.|++.
T Consensus 284 yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 284 YAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999999999987766554444332 2234456777778888888654
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhh-hhhhhhhhHHhhcC------------CCCchhHHHHHHHHHHHHHH
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGS------------HLNWRYAFWGEAILMLPFAV 251 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~------------~~gwr~~f~~~~~~~~~~~~ 251 (547)
............|.+|+++||.+.|+.+....+ |..++|.+.|++.+ ..||+..|++.++..++..+
T Consensus 364 ~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 364 FGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCIC 443 (467)
T ss_pred hhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHH
Confidence 333333345667999999999999999988886 77999999999988 57899999998777776655
Q ss_pred HHHhh
Q 008957 252 LAFVI 256 (547)
Q Consensus 252 ~~~~~ 256 (547)
..+++
T Consensus 444 ~~~~~ 448 (467)
T PRK09556 444 LMAIV 448 (467)
T ss_pred HHHHH
Confidence 55544
No 146
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.32 E-value=1e-11 Score=121.76 Aligned_cols=154 Identities=12% Similarity=0.133 Sum_probs=123.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc-cccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-SFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~G~~~ 184 (547)
|.+.+++|.+..+.|...+.+.++..++.+..|++.||+|||+.+..+..+..++.++... .++...+. -++.|++.
T Consensus 229 p~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~ 306 (393)
T PRK09705 229 PAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGL 306 (393)
T ss_pred HHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhc
Confidence 4455568999999999999999999999999999999999999999988887777665543 33332222 34568888
Q ss_pred hhhhhcccccccccCC-CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 185 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..| |...|++.++.+++..+....+.||++
T Consensus 307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 8777877767777775 5689999999999999999999999999998876 888888888887777777677767744
No 147
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.32 E-value=9.6e-12 Score=121.60 Aligned_cols=147 Identities=10% Similarity=0.075 Sum_probs=123.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
|...++.|.+..+.+++.+.+.++..+++++.|++.||+|+|+++..+.++.+++.+... + ...+....++.|++..
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~ 300 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGF 300 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHH
Confidence 555566788988999999999999999999999999999999999988888877765543 2 2344567788888877
Q ss_pred hhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHh
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
...|...+.+.|..|+++++...+.+....++|..+||.++|++.++.||++.|++.+...++..+..++
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999998888888888888999999999999999999999999999988877655544443
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.32 E-value=3.3e-12 Score=125.74 Aligned_cols=141 Identities=9% Similarity=0.010 Sum_probs=114.9
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHH--Hhhhc--cccHHHHHHHHHHhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAICRMLVGV 182 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--a~~~~~l~~~r~l~G~ 182 (547)
.+++++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+ .++.+.+++..++.|+
T Consensus 245 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (394)
T TIGR00883 245 YLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLAL 324 (394)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 3447789999999999999999999999999999999999998776554444333 12222 3567777888899999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhH-HHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHH
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILML 247 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~ 247 (547)
+.+...+...+++.|.+|+++|+++.++ ++.+..+|..++|.+++++.++.| |++.++...+..+
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 325 IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 9988999999999999999999999998 456677899999999999999888 9888777765443
No 149
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.31 E-value=1.7e-11 Score=122.29 Aligned_cols=151 Identities=20% Similarity=0.218 Sum_probs=137.4
Q ss_pred cccc-cccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQ-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|.+. +++|.++..+|++.+++.+|..+|++..+++.+|+++++++..+.++++++.+..+++++.+..++.-++.|++.
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~ 321 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAW 321 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 5554 568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
....+...+.+.+..|++.|||+++++++....+..+|.++.|.+.+.+|-+..+.+.++..++..++.+..
T Consensus 322 ~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 322 IIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988999999999999999999999999999999999999999999999999988877665555554443
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.29 E-value=2.9e-12 Score=126.69 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=116.1
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHH-HhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT-AGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
+.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++..+.. .+....++.+.+.+..++.|++.
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 34556789999999999999999999999999999999999999988877663333 33344567777777778888777
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHH
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGE 242 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~ 242 (547)
+...+....++.|.+|+++|++++|+.+....+|..++|+++|++.++.| |+..+...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 77778888999999999999999999999999999999999999999888 87766654
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=3.4e-11 Score=118.54 Aligned_cols=149 Identities=15% Similarity=0.085 Sum_probs=119.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehH-HHHHHHHHHHHhhh-----ccccHHHHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCG-----SSFDFWSIAICRML 179 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~-----~a~~~~~l~~~r~l 179 (547)
|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+... ..++++.+++..++
T Consensus 246 p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (402)
T TIGR00897 246 PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIA 325 (402)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence 6666789999999999999999999999999999999999988764 33333344333322 23567777888999
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++.++..++..++.+|.
T Consensus 326 ~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 326 LGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9988887655 3456677655 5799999999999999999999999999999999999999998887777666654
No 152
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.26 E-value=1.9e-11 Score=115.96 Aligned_cols=189 Identities=10% Similarity=0.007 Sum_probs=142.5
Q ss_pred hhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccch
Q 008957 318 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 397 (547)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 397 (547)
..+.....++.++....+.+......++...+.+++=-++++..+.+..-.....+...+.++.-++.+++++|+|+-
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-- 436 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-- 436 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--
Confidence 334444456777777666666666666665565555556777654443222334555677888888999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCcc
Q 008957 398 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
+++.++..+...=++......|+|..+.+=++-+...+..+..+.+++....||+.++++.++.......+|-.+|+
T Consensus 437 ---~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 437 ---NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred ---ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 67766666666667777777899999988899999999999999999999999999999999998888878999999
Q ss_pred chhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 008957 478 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 478 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
+++|.+...++ -+..|..+++.+++..++...+.
T Consensus 514 lIGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 514 LIGGFVVERFG-ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999987 45777777777666666555544
No 153
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.24 E-value=1.8e-11 Score=123.86 Aligned_cols=155 Identities=9% Similarity=-0.020 Sum_probs=120.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--c-HH-HHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--D-FW-SIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~-~~-~l~~~r~l~G 181 (547)
|.+.+++|.+....++......++..++.++.|+++||+|||++++.+.++.+++.++.+... + .+ ....+.++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 677778888877777888888889999999999999999999999999999988887765431 2 11 2223334444
Q ss_pred hhhhh-hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHh------hcCCCCchhHHHHHHHHHHHHHHHHH
Q 008957 182 VGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV------VGSHLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 182 ~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~------l~~~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
.+.+. ..+....++.|.+|+++|+.++++......+|..+++.+.+. +.+..+|++.|++.++++++.+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 44443 236678999999999999999999999999998888655543 44678999999999988888877777
Q ss_pred hhccCc
Q 008957 255 VIKPLQ 260 (547)
Q Consensus 255 ~~~p~~ 260 (547)
++.||+
T Consensus 455 ~~~~e~ 460 (479)
T PRK10077 455 KFVPET 460 (479)
T ss_pred hccccC
Confidence 776764
No 154
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.23 E-value=3.6e-11 Score=117.59 Aligned_cols=141 Identities=16% Similarity=0.087 Sum_probs=121.9
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 186 (547)
...+|.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|++.+.
T Consensus 230 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 230 IYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 34467899999999999999999999999999999999999999999999999888888999999999999999999998
Q ss_pred hhhcccccccccCCCCCcchhhhHHH-HhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHH
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 249 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 249 (547)
..+....++.+. +++++++..++++ ...++|..+||.++|.+.+.+|+ ..|+..+++.++.
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 888888888887 5556788888886 55678889999999999999887 5677666655443
No 155
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.22 E-value=1.6e-11 Score=113.63 Aligned_cols=174 Identities=17% Similarity=0.183 Sum_probs=145.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHH
Q 008957 328 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (547)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (547)
|.+.+....+.+..+++.--.+..-.|.+.++ ++.+..+. .+.+...+..-++.++.|.++||.+.| ..+..+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHH
Confidence 34556666777777777777788888877666 44665554 556777888999999999999999999 788888
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchh--hhhh
Q 008957 407 TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQ 484 (547)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~--g~l~ 484 (547)
.+++++..++..+.++.+.+.++..+.+.+.+..+|+..-.+.+-+++++||+..++-|+..|+ |+.+.|.+. +++.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~ 179 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHH
Confidence 8888888888888889999999999999999999999999999999999999999999999999 777778888 8888
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHH
Q 008957 485 DHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
++. +|+.+|++-++++++..++.+
T Consensus 180 ~~~-~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 180 FHG-GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred hcc-chhHHHHHHHHHHHHHHHHHH
Confidence 875 699999999988776666554
No 156
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.22 E-value=3.5e-11 Score=119.66 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=124.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHH
Q 008957 331 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 409 (547)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 409 (547)
.++..++..++.+.....+..+.|.+.++ .+.+.... .+.....++..++.++.|++.||+|+| +.+..+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~~ 97 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHHH
Confidence 34444555555555555667778887776 56665443 555677788899999999999999999 677777766
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccch
Q 008957 410 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 489 (547)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 489 (547)
..+..++....++.+...+..++.+++.+..++.....+.+.+++++|+++.++.+...+. |.+++|.+.+++.+..|
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g- 175 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG- 175 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-
Confidence 6666666666666666666666667777777777777888888889999999999877777 88889999999988765
Q ss_pred hHHHHHHHHHHHHHHH
Q 008957 490 WRKTTLALTSIFFLAA 505 (547)
Q Consensus 490 ~~~~~~~~~~~~~~~~ 505 (547)
|+..|++.+++.++..
T Consensus 176 w~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 176 WRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888776655443
No 157
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.20 E-value=1.1e-10 Score=117.39 Aligned_cols=151 Identities=9% Similarity=0.042 Sum_probs=120.8
Q ss_pred cccccccccCccchhHHHH-HHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh---hcc-ccHHHHHHHHHHh
Q 008957 106 SGIQGDFKLNNFQDGVLSS-AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICRMLV 180 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r~l~ 180 (547)
|.+.+++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-++.
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 5556778999999999975 6678999999999999999999998777666555544322 333 4555555566666
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.++.+...+...++..+..+++.+++..++.+...++|..+++.++|++.+..||+..|.+.++.+++..+...+.
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666788888999999999999999999999999999999999999999999999998888876666655
No 158
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.1e-10 Score=109.49 Aligned_cols=150 Identities=17% Similarity=0.099 Sum_probs=128.9
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-ccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~ 184 (547)
|.+++..|.+.+.++++.-+|.++..+|.++.|+++|| +.|+.+....++..+..+...+. ++.+..++.-++.|+..
T Consensus 236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~ 314 (394)
T COG2814 236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF 314 (394)
T ss_pred HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999999999999 99999999988777777766654 55566677777788877
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
..........+++ .-++.++.+.+++...+++|..+|..+||.+.+++|+....++.+++.++..++.+...
T Consensus 315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666677777 44567999999999999999999999999999999999999999998888777766554
No 159
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.20 E-value=1.5e-09 Score=102.49 Aligned_cols=325 Identities=15% Similarity=0.073 Sum_probs=184.4
Q ss_pred CccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhccccc
Q 008957 115 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPF 194 (547)
Q Consensus 115 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~ 194 (547)
+.--.+.+.-+-.+...+..+.+.++.+|+..+.=+.+..+++.+|.++.++++|.+.=+++-.+.+++.|........+
T Consensus 57 ~~~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l 136 (402)
T PF02487_consen 57 KSVSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL 136 (402)
T ss_pred CcccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH
Confidence 33335667777777888888888999999987666777788889999999999999998999999999999888777776
Q ss_pred ccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc--hhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcccc
Q 008957 195 IDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 272 (547)
Q Consensus 195 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 272 (547)
.. .+++ ..++.++.+.+.+.++|+..-..+.+ .|+ |..+++...+.++..+..++.+|.++......+.+..
T Consensus 137 t~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~ 210 (402)
T PF02487_consen 137 TH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESE 210 (402)
T ss_pred HH-hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCC
Confidence 44 5554 35788888888888888877666655 554 7788888777766666666666553222111110000
Q ss_pred ccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhh
Q 008957 273 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 352 (547)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (547)
. ..+ ++....+....+.+...+ ...++.++..+.++. .+..+.+.+++-+....++.
T Consensus 211 ~-------~~~--------~~~~~~~~~~~~~~~~~~----~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~-- 267 (402)
T PF02487_consen 211 D-------EAE--------DDLLESETSESKPDSSSK----LSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVA-- 267 (402)
T ss_pred C-------ccc--------ccccccccccccccccch----hhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchH--
Confidence 0 000 000000000000000000 111111222232222 22223333333333333332
Q ss_pred ccceeEeeccCch-hhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH---HHHHhhhHHHHH
Q 008957 353 GPKAGYNIYHMSN-ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCLSSLYGFL 427 (547)
Q Consensus 353 ~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 427 (547)
|.........+. ... .+...+.++.++++--..++ |+.+. +++.....+-.+..+ ...+.++.|..+
T Consensus 268 -~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~l-----wils~LQ~~nl~~~~l~s~~~fipsi~ivf 339 (402)
T PF02487_consen 268 -PTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRL-----WILSLLQVINLVFLLLQSWYRFIPSIWIVF 339 (402)
T ss_pred -HHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhH-----HHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 222211112222 222 34455667766666544332 23221 222222222222221 122235677777
Q ss_pred HHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCcc
Q 008957 428 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
++++.-|...+..+......+.++.++++|..++|... +...+|..++.
T Consensus 340 ~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vs-vsds~GI~lAg 388 (402)
T PF02487_consen 340 VLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVS-VSDSLGILLAG 388 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHhhHHHHHHH
Confidence 77888888888888888888899999999999999985 44443655444
No 160
>PRK09952 shikimate transporter; Provisional
Probab=99.20 E-value=1.1e-10 Score=116.14 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=113.1
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc---c-ccHHHHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---S-FDFWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a-~~~~~l~~~r~l~G 181 (547)
+.+.+++|.+......+.....+...++.+++|+++||+|||++++.+.++..++.+.... . ++.+.+++..++.|
T Consensus 275 ~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 275 NYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLAN 354 (438)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 3456678888776666666677777888999999999999999988887766555433322 2 23445555667778
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHH-HhhhhhhhhhhhhHHhhcCCC--CchhHHHHHHHHHHHHHHHHHhh
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
++.+...+...+++.|.+|.+.|+.+.++.+ .+..+|..++|.+.+++.+.. +|+..+...++..++.++..+..
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8888888888999999999999998888854 445588899999999987633 48888888877777666665543
No 161
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.19 E-value=1.3e-10 Score=114.27 Aligned_cols=144 Identities=8% Similarity=0.044 Sum_probs=125.1
Q ss_pred ccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhccc
Q 008957 113 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 192 (547)
Q Consensus 113 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~ 192 (547)
+.+....|.+.+...+...++.+..|++.||+|||+.+.++.++.+++.++...++|.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778999999999999999999999999999999999999999888888899999999999999999877766677
Q ss_pred ccccccCCCCCcchhhhH-HHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 193 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 193 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.++.+..+++.++...+. ++....+|..++++++|++.+..||+..|++.+++.++..+...+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 778888888888877766 6788999999999999999999999999999998887777665543
No 162
>PRK10054 putative transporter; Provisional
Probab=99.19 E-value=3.5e-11 Score=117.93 Aligned_cols=170 Identities=9% Similarity=0.010 Sum_probs=125.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHH
Q 008957 329 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 407 (547)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 407 (547)
++.++.+.+..++.....+....++|.|+++..+.+.... ...+...++.+++.++.|+++||+||| +.+..+.
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~ 80 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAI 80 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHH
Confidence 3456677777888888888888889999988788876554 444566677888899999999999999 6666666
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 408 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
+...+..++....++.+..+++.++.+.......+.......+..+++.|+++.|+.+...+. |.+++|.+.+++.+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~ 158 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-h
Confidence 555555555555666655555555555544455555666777888889999999999888887 88999999998875 3
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 008957 488 NNWRKTTLALTSIFFLAAG 506 (547)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~ 506 (547)
+|+..|.+.+++.++..+
T Consensus 159 -g~~~~f~~~~~~~~i~~i 176 (395)
T PRK10054 159 -SINLPFWLAAICSAFPLV 176 (395)
T ss_pred -ccCcHHHHHHHHHHHHHH
Confidence 477888877766555443
No 163
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.19 E-value=8.3e-11 Score=117.63 Aligned_cols=151 Identities=9% Similarity=-0.074 Sum_probs=108.6
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc--CCceeh-HHHHHHHHHHHHhhhc--cccHHHHHHHHHHhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLI-GVGLSVWTFATAGCGS--SFDFWSIAICRMLVG 181 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~G 181 (547)
.+++++|.+..+.++....+.++..++.+++|+++||+ |||+.. +....+..++.++..+ ..+.+.+.+..++.|
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 358 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIG 358 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 34556788888999999999999999999999999999 555432 2222333333333222 345555555556666
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhh-hhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
.+..........+..|.+|+++||++.|+.+....+|.. ++|.+.+.+.++.||+..|++.++.+++.++....+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 359 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 544332333345677999999999999999988888765 5899999999999999999999888777766666554
No 164
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.17 E-value=6.8e-10 Score=98.54 Aligned_cols=149 Identities=11% Similarity=0.068 Sum_probs=117.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-------ccHHHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------FDFWSIAICRM 178 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~~~~l~~~r~ 178 (547)
|.+++.+|+|.+|.+.+.++-.+|..+ .++.|.+.|++|++.++.+|.+...+|..+...+ .++|.+.+..+
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLF 104 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHH
Confidence 899999999999999999999999987 5888999999999999999999999999876542 47889999999
Q ss_pred HhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
+.|.+.+....++.....+.||. +||.+.|+.-...+++..+-..+...+.+.-.-+..+.+...+.++..+..++.
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhe
Confidence 99998887777777777788985 699999999999999987766665555544333444444433444444444443
No 165
>PRK15075 citrate-proton symporter; Provisional
Probab=99.16 E-value=1.9e-10 Score=114.38 Aligned_cols=132 Identities=9% Similarity=-0.019 Sum_probs=98.8
Q ss_pred ccc-ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHH-h---hhccccHHHHHHHHHHh
Q 008957 106 SGI-QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-G---CGSSFDFWSIAICRMLV 180 (547)
Q Consensus 106 ~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~---~~~a~~~~~l~~~r~l~ 180 (547)
|.+ ++.+|.+..+.++....+.++..++.+.+|+++||+|||+.++.+.++..+..+ . ....+++..+.+..++.
T Consensus 262 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (434)
T PRK15075 262 PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWL 341 (434)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 444 445799988899999999999999999999999999999988876554433221 1 11234454555556666
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHH-hhhhhhhhhhhhHHhhcCCCCchh
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWRY 237 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr~ 237 (547)
|++.+...+....++.|.+|+++|+.++++... +..++..++|.+.+++.++.|+++
T Consensus 342 ~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 342 SFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred HHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 777776666677889999999999999998644 444457789999999998888653
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.13 E-value=3.9e-10 Score=113.26 Aligned_cols=149 Identities=10% Similarity=-0.029 Sum_probs=107.4
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCce-------ehHHHHHHHHHHHHhhhccccHHHHHHHHHH
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-------LIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-------~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (547)
.+.+++|.+..+.+.+.+++.++..++.+++|+++||+|||+ .+.+..++.++..++....++.+..++.-++
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l 357 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMIL 357 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 346678999999999999999999999999999999998762 2333333344444455566676666666677
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
.+++.+...+...+++.+..| ++||...|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++.+++.++..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 358 FSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 777766666666677777654 57999999987777677666665543 22345699999999888877766665553
No 167
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.12 E-value=3.3e-11 Score=117.31 Aligned_cols=165 Identities=8% Similarity=-0.038 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH
Q 008957 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 415 (547)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (547)
....++...........+|.|..+................++.+++.++.|+++||+||| +.+..+..+.....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~~ 79 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLVA 79 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHHH
Confidence 344445555555555666666665433323333555677788889999999999999999 666666555555444
Q ss_pred HHHHhh-----hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchh
Q 008957 416 TAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 490 (547)
Q Consensus 416 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~ 490 (547)
+..... +.+...+..++.+++.+...+....++.+..++++|+++.++.+..... |.+++|.+.+.+.+..+ |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g-~ 157 (365)
T TIGR00900 80 VLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG-I 157 (365)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh-H
Confidence 444444 6677777777778887777788888889999999999999999877777 88999999999988765 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 008957 491 RKTTLALTSIFFLAAGI 507 (547)
Q Consensus 491 ~~~~~~~~~~~~~~~~~ 507 (547)
+..+++.++..++..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 158 KWAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88887766655544433
No 168
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.12 E-value=3.4e-10 Score=111.80 Aligned_cols=151 Identities=15% Similarity=0.192 Sum_probs=133.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCc--eehHHHHHHHHHHHHhhhc--------cccHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAI 175 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------a~~~~~l~~ 175 (547)
....+++|++..+...+.-+..+...+|++++|++.||+|.| ++++++++++.+..+...+ .++-+.+++
T Consensus 306 i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~ 385 (477)
T PF11700_consen 306 IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWV 385 (477)
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHH
Confidence 345668999999999999999999999999999999999999 8999988888666666555 678899999
Q ss_pred HHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHHH
Q 008957 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 176 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~ 254 (547)
.-++.|++.|..++.+.++.+|..|+++.+..+|++....-....+||++.+.+.+..| -|+.++...++.++..++.+
T Consensus 386 ~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 386 LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999987776 88888888777766666554
Q ss_pred hh
Q 008957 255 VI 256 (547)
Q Consensus 255 ~~ 256 (547)
++
T Consensus 466 ~v 467 (477)
T PF11700_consen 466 FV 467 (477)
T ss_pred hc
Confidence 44
No 169
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.11 E-value=4.4e-10 Score=111.96 Aligned_cols=153 Identities=10% Similarity=-0.068 Sum_probs=108.7
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHH---HHHhhhc--cccHHHHHHHHHHhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF---ATAGCGS--SFDFWSIAICRMLVG 181 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~---~~~~~~~--a~~~~~l~~~r~l~G 181 (547)
.+++..|.+..+.++..+.+.++..++.+.+|+++||+|+++....+..+..+ +.+.... ..+.+...+.-++.|
T Consensus 277 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (438)
T TIGR00712 277 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIG 356 (438)
T ss_pred HHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 34455788999999999999999999999999999999755433333322221 1121112 234444444445555
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhh-hhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTG-VALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
++.............|.+|+++|+.+.|+.+....+| ..++|.+.|.+.++.||.+.|++.++..++..+..+++.||
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 357 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5432222222345779999999999999998887776 57899999999999999999999888887777777777766
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.11 E-value=8.4e-11 Score=115.09 Aligned_cols=134 Identities=13% Similarity=-0.004 Sum_probs=101.9
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCc-eehHHH-H-HHHHHHHHhhhc--cccHHHHHHHHHHh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF-RLIGVG-L-SVWTFATAGCGS--SFDFWSIAICRMLV 180 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr-~~l~~~-~-~~~~~~~~~~~~--a~~~~~l~~~r~l~ 180 (547)
+.+.+++|.+..+.+++.+.+.++..++.++.|++.||+++| +..+.. . ....++...... ..+.+.+++..++.
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFAL 320 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 345567899999999999999999999999999999986443 332221 1 112222222222 34556666777778
Q ss_pred hhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHH
Q 008957 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 239 (547)
Q Consensus 181 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 239 (547)
|+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.++.||++.|
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 321 GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 87666566666778899999999999999999999999999999999999999999765
No 171
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.11 E-value=3.4e-09 Score=101.80 Aligned_cols=309 Identities=11% Similarity=0.032 Sum_probs=183.9
Q ss_pred hhHH-HHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccc
Q 008957 119 DGVL-SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 197 (547)
Q Consensus 119 ~g~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 197 (547)
.|.. .++....+.+++++.+.+.|+.|.|+.++++...+....+..-+ .|-+.+++.-.+.|+|.+..+..-..+++|
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhh
Confidence 3444 77888888999999999999999999999999999988877665 456788899999999999999999999999
Q ss_pred cCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC--------CCch-hHH----------HHHHHHHHHHHHHH--Hhh
Q 008957 198 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------LNWR-YAF----------WGEAILMLPFAVLA--FVI 256 (547)
Q Consensus 198 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~gwr-~~f----------~~~~~~~~~~~~~~--~~~ 256 (547)
..+++.+.+..++.-+....+.++|..+-..+..+ .+-+ +.+ .+.+++..+..+.. ...
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~ 209 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF 209 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee
Confidence 99999999999999888888888876655433211 1111 111 11111111100000 001
Q ss_pred ccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHH
Q 008957 257 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 336 (547)
Q Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (547)
.|... ...... .. + ...++..+..-.+++++....+.
T Consensus 210 ~p~~~------~~~~~~-----------------------~~------~--------~~~~~~l~~~~~l~~~~~ml~L~ 246 (461)
T KOG3098|consen 210 LPSKD------VVNCKS-----------------------SS------E--------TSFSELLKLTFKLLKTPKMLLLF 246 (461)
T ss_pred cCccc------hhhhhh-----------------------hc------c--------ccHHHHHHHHHHHhcCHhHHHHH
Confidence 11100 000000 00 0 01111223334556777777777
Q ss_pred HHHHHHHHHHHHHhhhccceeEee--ccCchh--hHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHH
Q 008957 337 LGYIAYNFVIGAYSYWGPKAGYNI--YHMSNA--DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 412 (547)
Q Consensus 337 ~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 412 (547)
...+..++.........|..+.-. .+.+.. ........+++.+++.+..+.+.+|..+.... +.+..+..+-..
T Consensus 247 ~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~ 324 (461)
T KOG3098|consen 247 PFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLI 324 (461)
T ss_pred HHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHH
Confidence 666655555555555555433322 222211 12223445566677777777777665433111 444444444333
Q ss_pred HHHHHHHh------------------hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCC
Q 008957 413 SCLTAFCL------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 474 (547)
Q Consensus 413 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~ 474 (547)
.+++.... ++.....++.++.|++-.......+..+.... |+.|..+.++.-.-... +..
T Consensus 325 ~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~-~s~ 402 (461)
T KOG3098|consen 325 GFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSV-ASC 402 (461)
T ss_pred HHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHH-HHH
Confidence 33333221 12345666667777777777777777777766 77888888887544444 544
Q ss_pred C
Q 008957 475 P 475 (547)
Q Consensus 475 ~ 475 (547)
+
T Consensus 403 v 403 (461)
T KOG3098|consen 403 V 403 (461)
T ss_pred H
Confidence 3
No 172
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.11 E-value=8.4e-11 Score=117.64 Aligned_cols=172 Identities=11% Similarity=-0.052 Sum_probs=127.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccceeEee--ccCchhhH-hhhhhhcccccccceeeeeeeec-ccccchhHHHHHHH
Q 008957 330 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA 405 (547)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 405 (547)
+.++.+.+..++..+.++++..++|.|+++. .+.+.... .......++..++.+++|+++|| +||| +.+..
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~ 84 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL 84 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence 4455666667777788889999999998876 66665443 55566778889999999999999 8999 67777
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCc---chhHHHHHHHHHHHhhcCCCccchhhh
Q 008957 406 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV 482 (547)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~g~~~~~~~~~g~~~~~~~~g~ 482 (547)
+.++..+..++....++.+...+...+.+.+.+...+.......+.++++ .|+++.++.+...++ |.++||.+.++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence 76666666655555555555555555666666666677777777777764 488899999888888 99999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 483 LQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 483 l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
+.+..+ |+..|.+.++..+++.+.+
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHHHH
Confidence 998765 8888888776555544433
No 173
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.10 E-value=4e-10 Score=110.64 Aligned_cols=146 Identities=12% Similarity=-0.074 Sum_probs=113.7
Q ss_pred cccccccccCccchhHHHHHHH-HHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc------cccHHHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICRM 178 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a~~~~~l~~~r~ 178 (547)
+...+|.|++++++|++..... ....++.++.|++.||+|+|+.+..+.++.++..+.... .++.+.++....
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSA 311 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHH
Confidence 3344568999999999988876 466778999999999999999988877666333332211 234444555566
Q ss_pred HhhhhhhhhhhcccccccccCCC-CCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHH
Q 008957 179 LVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 251 (547)
Q Consensus 179 l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 251 (547)
+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.++..+
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 66777777777777787777776 78999999999999999999999999999999999999988876665443
No 174
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.09 E-value=5.4e-10 Score=113.38 Aligned_cols=155 Identities=10% Similarity=-0.060 Sum_probs=106.0
Q ss_pred cccccccccCccchhH------------HHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcccc----
Q 008957 106 SGIQGDFKLNNFQDGV------------LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD---- 169 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~---- 169 (547)
|.+.++.|.+..+.+. ......++..++.+..++++||+|||++++++.++.+++.++.++..+
T Consensus 312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~ 391 (502)
T TIGR00887 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST 391 (502)
T ss_pred HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 6666677776543221 233445566778899999999999999999988887777665554321
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC----------CCchhHH
Q 008957 170 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------LNWRYAF 239 (547)
Q Consensus 170 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~----------~gwr~~f 239 (547)
...+.+.-+...++.....+....+.+|.+|.+.|+++.++.+....+|..+++.+.+++.+. .++...|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 471 (502)
T TIGR00887 392 HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVL 471 (502)
T ss_pred hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHH
Confidence 111111111112222223455667789999999999999999999999999999999988763 3456788
Q ss_pred HHHHHHHHHHHHHHHhhccCcc
Q 008957 240 WGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
++.++.+++..+.. ++.||+.
T Consensus 472 ~i~~~~~~~~~i~~-~~lpEt~ 492 (502)
T TIGR00887 472 EIFALFMFLGILFT-LLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHHh-eEeccCC
Confidence 88888777665544 5557743
No 175
>PRK10504 putative transporter; Provisional
Probab=99.08 E-value=6.6e-10 Score=112.12 Aligned_cols=130 Identities=10% Similarity=0.107 Sum_probs=109.4
Q ss_pred ccccc-ccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc---ccHHHHHHHHHHhh
Q 008957 106 SGIQG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G 181 (547)
|...+ .+|.++.+.+++...+.++..++.++.|++.||+|||+++..+.++.+++.++..+. ++.+.+.+.-++.|
T Consensus 285 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 285 PVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 44433 578899999999999999999999999999999999999999998888877666543 34444556678888
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 235 (547)
++.+...+....++.+..|+++|+.+.++.+....+|..+|+.+++.+.+..|+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999888888889999999999999999999999999999999999988665444
No 176
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=1.4e-10 Score=114.16 Aligned_cols=175 Identities=13% Similarity=0.016 Sum_probs=120.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecc-cccchhHHHHHHH
Q 008957 328 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSA 405 (547)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~ 405 (547)
+.+.++......+...+.++++..++|.|+++..+.+.... ...........++.+++|+++||+ ||| +.+..
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~ili 81 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVML 81 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHH
Confidence 34456666667777788889999999999988777776444 444555677788899999999999 998 56666
Q ss_pred HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhcCccceeeeecccCCc--chhHHHHHHHHHHHhhcCCCccchhhh
Q 008957 406 ATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGV 482 (547)
Q Consensus 406 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~g~~~~~~~~~g~~~~~~~~g~ 482 (547)
+.++..+..++..... +.....+...+...+.+...+....+..+.+|++ .|.++.++.+...++ |+.++|.+.|+
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~ 160 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHH
Confidence 5555555443332222 1122222233333444444455566778888774 799999999988887 88999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 483 LQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 483 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
+.+..| |+..|.+.++..+++.+.+.
T Consensus 161 L~~~~G-w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 161 AQEEYS-WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 988765 88888887665555444444
No 177
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.07 E-value=7.5e-10 Score=95.44 Aligned_cols=312 Identities=12% Similarity=0.083 Sum_probs=177.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
-.+-+.++....++|.+.-+-.-...+...+.|.++|+-|||+.-+.-++.+.++++ .-.++.|-.++++|.+.|+..+
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATS 139 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHH
Confidence 446677888889999888888888888888999999999999976666665555443 4567889999999999999999
Q ss_pred hhhhccccc-ccccCCCCCcchhhhHHH--------HhhhhhhhhhhhhHHhhcCCC--CchhHHHHHHHHHHHHHHHHH
Q 008957 186 SFISLAAPF-IDDNAPVPQKTAWLSMFY--------MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 186 ~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~ 254 (547)
..+.+-.++ +.|..+ +|+.---+.. .++++=.+++.+.+..+.+.+ |--.+|-..+.+.. +...
T Consensus 140 LLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa---igmA 214 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA---IGMA 214 (454)
T ss_pred HHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH---HHHH
Confidence 888877655 555543 3443222222 223333344444555555543 33445544332221 2222
Q ss_pred hhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHH
Q 008957 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (547)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (547)
..+..+.....++.+.+.. ..++....+.+..+.++.+
T Consensus 215 vil~~W~ENygdps~~kdl------------------------------------------ltqf~gaa~aiaSD~ki~L 252 (454)
T KOG4332|consen 215 VILSSWSENYGDPSENKDL------------------------------------------LTQFKGAARAIASDEKIAL 252 (454)
T ss_pred HHHhhhhhccCChhhhHHH------------------------------------------HHHhhHhHHHHhcchHHHH
Confidence 2223333332222222211 1222234455666666555
Q ss_pred HHHHHHHHHHH-HHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH
Q 008957 335 NVLGYIAYNFV-IGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (547)
Q Consensus 335 ~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (547)
+-..-.++-.. +..+..|.|..--+..+.+ .. .+..-+.+++.+|.-+..++..|-..|.. ..+.+...+....
T Consensus 253 LG~iqsLFE~smytFVFLWTPaLspn~e~iP-hG-fiFatFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~vs~a~ 327 (454)
T KOG4332|consen 253 LGAIQSLFEGSMYTFVFLWTPALSPNDEEIP-HG-FIFATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLVSIAA 327 (454)
T ss_pred HHHHHHHHhhhhheeeeeecccCCCCcccCC-ch-hHHHHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHHHHHH
Confidence 44443333333 3334456665543332222 12 22233445556666555555444333322 3333333333333
Q ss_pred HHHHHHh-------hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHh
Q 008957 414 CLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (547)
Q Consensus 414 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (547)
..+.... .+....++.+++.-.+.+..+|.++-.-.+.+|.+.|++.+-.+..-.++
T Consensus 328 l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 328 LLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 3332222 13444567778888888999999998888989999999877766544454
No 178
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.07 E-value=1e-09 Score=108.20 Aligned_cols=147 Identities=13% Similarity=0.202 Sum_probs=110.1
Q ss_pred cccccccccCccchhHHHHHHH-HHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh---hcc-ccHHHHHHHH---
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICR--- 177 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r--- 177 (547)
+.+.+++|++..+.+++.+... ++..++.+++|++.||+|+|+.+..+.++..+..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4566778999999999987654 5689999999999999999998887777666554433 343 4556655554
Q ss_pred -HHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 178 -MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 178 -~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
++.|++.+...+....++.+.+|.++ .++++...++|..+++.++|.+.++.||+..|.+.++++++..++.+..
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677777777888888887654 4556666677877777789999999999999999988887765555433
No 179
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.07 E-value=5.9e-10 Score=125.33 Aligned_cols=151 Identities=17% Similarity=0.129 Sum_probs=128.1
Q ss_pred cccccccccCcc-chhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNF-QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
+.+.+.+|.+.. +.+++.+...++.+++.+++|++.||+++|+++.++.++.+++.++..+..+.+.++++.++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 445677899988 9999999999999999999999999999999999999999998888888889999999999999999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC-CCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
+...+...+++.+..|+++||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++..+..++.
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYTLLL 409 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988899999999999999999999999999999888888776653 2456667777666555544444333
No 180
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.06 E-value=4.4e-10 Score=111.87 Aligned_cols=137 Identities=11% Similarity=0.039 Sum_probs=103.0
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~ 183 (547)
|...++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.++..++.++....+ +...+.+..+..+.+
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 255 PTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT 334 (426)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 555566788888999999999999999999999999999999999888877766655444332 222222222222222
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHH
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE 242 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~ 242 (547)
.....+..+.++.|.+|+++||+++|+......+|..++|.+++++.++.|+....++.
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 22233445677899999999999999999999999999999999999988876543333
No 181
>TIGR00898 2A0119 cation transport protein.
Probab=99.05 E-value=1.2e-09 Score=111.38 Aligned_cols=138 Identities=12% Similarity=-0.101 Sum_probs=111.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccH--HHHHHHHHHhhhhhhhhhhccccccccc
Q 008957 121 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDN 198 (547)
Q Consensus 121 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 198 (547)
+......+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44445567778889999999999999999999999999988888776654 4555666777777777888889999999
Q ss_pred CCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
+|++.|+.++|+.+....+|.+++|.+.+ +. ..++..++++.++..++..++.+ ++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 99999999999999999999999999988 43 35677888888887777766654 446643
No 182
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=2.7e-09 Score=92.92 Aligned_cols=176 Identities=18% Similarity=0.142 Sum_probs=128.0
Q ss_pred CCchhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhh
Q 008957 61 FTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASL 140 (547)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l 140 (547)
+.+.+++.++|+++.+..+....++. ...++.||+|+...+.+.+....-.++.+++.|.+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~-------------------~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i 323 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGP-------------------MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAI 323 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhH-------------------HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHh
Confidence 33445666677777666655555553 45788999999999999999999999999999999
Q ss_pred hhhcCCceehHHHHHHHHH-HHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhh
Q 008957 141 AKSHNPFRLIGVGLSVWTF-ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV 219 (547)
Q Consensus 141 ~dr~Grr~~l~~~~~~~~~-~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 219 (547)
+||+|++...+.+..+..+ +-.+..| +++.=+++..+.|+..+.........++-..|+++.|.+.|..+...++|.
T Consensus 324 ~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgl 401 (459)
T KOG4686|consen 324 SDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGL 401 (459)
T ss_pred HhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhh
Confidence 9999999887776554443 4344443 344445677788887776555566677888888999999999999999999
Q ss_pred hhhhhhHHhhcCCCC---chhHHHHHHHHHHHHHHHHHhhc
Q 008957 220 ALGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 220 ~~g~~l~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
.+.|++++++.++-| |--.|.+......+..+...+..
T Consensus 402 a~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 402 AFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 999999999987644 55555544443333344444443
No 183
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.05 E-value=5.6e-10 Score=110.90 Aligned_cols=152 Identities=17% Similarity=0.187 Sum_probs=139.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC--CceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
|...++.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..+++++.+++.+.+.++++++.++..-.+.|++
T Consensus 322 ~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~ 401 (509)
T KOG2504|consen 322 PSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFC 401 (509)
T ss_pred HHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999988 55577788888888999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHHHhhc
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
.|........++.|..+.++-..+.|+.....+++.++||++++++.+..| |...|+..++..++..+.+++..
T Consensus 402 ~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 402 VGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999998888899999999999999999999999999999999999998877 99999999988887776666554
No 184
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.05 E-value=1.1e-09 Score=109.40 Aligned_cols=121 Identities=17% Similarity=0.125 Sum_probs=104.9
Q ss_pred CccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-ccHHHHHHHHHHhhhhhhhhhhcccc
Q 008957 115 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAP 193 (547)
Q Consensus 115 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~~~~~~ 193 (547)
+..+.+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667888888999999999999999999999999999998888888777665 46677788889999999999998999
Q ss_pred cccccCC-------CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc
Q 008957 194 FIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (547)
Q Consensus 194 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 235 (547)
+++|..+ ++++|.+.++.+....+|..+++.+.+.+.+..||
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998865 45679999999999999999999999998876666
No 185
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.05 E-value=9.9e-11 Score=113.34 Aligned_cols=163 Identities=16% Similarity=0.139 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHH
Q 008957 338 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 416 (547)
Q Consensus 338 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (547)
..++............|.++.+.++.+.... .......++..++.++.|+++||+||| +.+..+.++..+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHHH
Confidence 3444455555555666644555566555443 455667788899999999999999999 6666666666555444
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHH
Q 008957 417 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 496 (547)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 496 (547)
..+.++.+..++..++.+++.+...+....++.+..++++|+++.++.+..... |.+++|.+.+.+.+..+ |+..+++
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~~ 156 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFLI 156 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHHH
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-ccccccc
Confidence 433356667777778888888888888888999999999999999999877777 88999999999997654 8888888
Q ss_pred HHHHHHHHHHH
Q 008957 497 LTSIFFLAAGI 507 (547)
Q Consensus 497 ~~~~~~~~~~~ 507 (547)
.+++.++..++
T Consensus 157 ~~~~~~~~~il 167 (352)
T PF07690_consen 157 SAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred ccchhhhhhhh
Confidence 88887776553
No 186
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.05 E-value=9.5e-10 Score=102.17 Aligned_cols=143 Identities=14% Similarity=0.100 Sum_probs=126.5
Q ss_pred ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhh
Q 008957 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (547)
Q Consensus 109 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~ 188 (547)
+.++|++..++.++.-...+..++|++++|+|.||+|.|+++..+++++.+.++..-+...-..+.++-.+.|.+.|..+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 45999999999999999999999999999999999999999999999999999888887777778888899999999999
Q ss_pred hcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHH
Q 008957 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAV 251 (547)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~ 251 (547)
..+.++.++.+|+++-++.+|+++...-.+..+||.+-+.+.+..| -|..+....++..+..+
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 9999999999999999999999999999999999999998876543 56666665544443333
No 187
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.04 E-value=2.1e-09 Score=106.21 Aligned_cols=148 Identities=11% Similarity=-0.039 Sum_probs=118.0
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-----ccHHHHHHHHHHhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGV 182 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~G~ 182 (547)
+.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++..++.++..+. .+.+.+++.-++.|+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 456789999999999888888999999999999999999999999988887777766543 356777888999999
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
+.+...+........ .++++||++.++++....+|..+|+.+++.+.+..+|....+..++.+++..++...+
T Consensus 322 g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 322 GIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 998877766555443 3457899999999999999999999999999888887776666555555554444333
No 188
>TIGR00895 2A0115 benzoate transport.
Probab=99.04 E-value=2.1e-10 Score=113.17 Aligned_cols=124 Identities=15% Similarity=0.029 Sum_probs=105.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
|.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+....+......++....++.+.+++..++.|++.+
T Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 274 PKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 66778889999999999999999999999999999999999954444443333333333335677888889999999999
Q ss_pred hhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhh
Q 008957 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 229 (547)
...+...+++.|.+|+++|++++++......+|..+||.++|++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999875
No 189
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.04 E-value=1.4e-09 Score=108.11 Aligned_cols=148 Identities=8% Similarity=-0.001 Sum_probs=97.5
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh----hccccHHHHHHHHHHhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC----GSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~----~~a~~~~~l~~~r~l~G~ 182 (547)
.+.+++|.+..+.++..++..++..+++++.|+++||+|||+.++++.++.++..+.. ...++....+..-.+.++
T Consensus 269 ~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (432)
T PRK10406 269 YLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALL 348 (432)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 3556788888889999998888889999999999999999998877766544333211 112233332222222333
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhh-hhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHHHh
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 255 (547)
+.+...+....+++|++|++.|+.++|+.+...++ .....|.+.+.+.. .| |...++..++..++..+..++
T Consensus 349 ~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 349 IVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 33444445667889999999999999998866553 23347777776643 34 655666665555555554444
No 190
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.03 E-value=1.6e-09 Score=106.12 Aligned_cols=145 Identities=14% Similarity=-0.041 Sum_probs=117.5
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHH-HHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV-WTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|.+.+++|.+..+.+++.+.+.++..++.++.+++.||.+ |+.++.+.++ .....++....++.+.+.+..++.|++.
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5567788999999999999999999999999999999964 4444444444 3333444456677888888999999999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHH
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 252 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 252 (547)
+...+...+++.+..| ++++++.++.....++|..+|+.++|.+.+..|++..++..++..++..+.
T Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 320 ALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 9888888888988887 457788888888999999999999999999999999999887765554443
No 191
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.03 E-value=1.1e-09 Score=102.94 Aligned_cols=130 Identities=11% Similarity=0.053 Sum_probs=108.9
Q ss_pred ccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhc
Q 008957 111 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL 190 (547)
Q Consensus 111 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~ 190 (547)
.+|+++.+.++..+.+..+..+|.+..+++.||+|+|+.+.++.++..++.++....++...+ .+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999988888888887766665554333 4556889999999999
Q ss_pred ccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHH
Q 008957 191 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 243 (547)
Q Consensus 191 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 243 (547)
..+...+..|++ .+.+.++. ....+|..++|++.|.+.+..|.+..|++..
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 999998888764 55666765 5566899999999999999889999888554
No 192
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.02 E-value=4.9e-10 Score=112.85 Aligned_cols=178 Identities=11% Similarity=-0.051 Sum_probs=119.5
Q ss_pred hhcccc-hhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeec-ccccchhHHH
Q 008957 325 VLLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFK 401 (547)
Q Consensus 325 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~ 401 (547)
+.+++| .++......++..+.++.+..+++.|+++..+.+.... ..............+++|++.|| +||| +
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~ 89 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----R 89 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----H
Confidence 344555 47777778888888889999999999988888875443 22222222333334578999999 5998 6
Q ss_pred HHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhcCccceeeeecccCCc--chhHHHHHHHHHHHhhcCCCccc
Q 008957 402 LLSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSP 478 (547)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~g~~~~~~~~~g~~~~~~ 478 (547)
.+..+.++..+..++..... +.....+...+.+.+.+...+.......+.+|++ .+..+.++.+...++ |.+++|.
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~ 168 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSML 168 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHH
Confidence 66666655555544444432 3333334445556666666666667777777653 345677877777787 8899999
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 479 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 479 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
+.|++.+..| |+..|.+.++..+++.+.++
T Consensus 169 i~g~l~~~~g-~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 169 ATPWLAAKYG-WSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHH
Confidence 9999998865 88999887765555554443
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.02 E-value=1.6e-09 Score=121.47 Aligned_cols=149 Identities=11% Similarity=0.065 Sum_probs=124.0
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-------------------
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------------------- 167 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------------- 167 (547)
.+.+.+|.+..+.|++.+++.+|.+++.++.|+++|++++++.+..+.++.+++.+..++.
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLS 330 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhc
Confidence 3455689999999999999999999999999999999888887777777766666544443
Q ss_pred -ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc-CCCCchhHHHHHHHH
Q 008957 168 -FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAIL 245 (547)
Q Consensus 168 -~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~ 245 (547)
++.+.++++-++.|++.+...+...+++.+.+|++.||+++|+.+....+|..+++++++.+. ...++...|++.++.
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 331 KRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 678888899999999999999999999999999999999999999999999999999998886 345677777777665
Q ss_pred HHHHHHHHHh
Q 008957 246 MLPFAVLAFV 255 (547)
Q Consensus 246 ~~~~~~~~~~ 255 (547)
.++..++.+.
T Consensus 411 ~~~~~~~~~~ 420 (1140)
T PRK06814 411 NLIVAILILR 420 (1140)
T ss_pred HHHHHHHHHH
Confidence 5555444443
No 194
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.02 E-value=1.9e-09 Score=105.41 Aligned_cols=150 Identities=12% Similarity=0.030 Sum_probs=112.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh-ccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-SSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~a~~~~~l~~~r~l~G~~~ 184 (547)
|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++.. +.++.+..++..++.+++.
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 303 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGL 303 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 456666899999999999999999999999999999999999999999888888776554 3556666666677777665
Q ss_pred hhhhhcccc-cccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCC-CCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 185 ASFISLAAP-FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 185 ~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
....+.... ...+..+++.++.. ..+....+|..+||.++|++.+. .+|++.+.+.++.+++.......+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 544443333 34444444444443 34667889999999999998874 6899999998877766555555444
No 195
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.01 E-value=3.9e-09 Score=102.43 Aligned_cols=156 Identities=11% Similarity=-0.063 Sum_probs=126.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc---cHH------HHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFW------SIAIC 176 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---~~~------~l~~~ 176 (547)
..+-++-|++..+..++.....+...+..+.+..+.||+|||+.++++..+..+..++...+. +.. ..+++
T Consensus 294 t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~ 373 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA 373 (485)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 667788899999999999999999999999999999999999999999999988887766431 111 12233
Q ss_pred HHHhhhhhhh-hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHh
Q 008957 177 RMLVGVGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 177 r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
.++..++.+. ..|...-+.+|.+|++.|..++++......++..+-...-..+.+..|= +.|++..+++++..+..++
T Consensus 374 ~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~ 452 (485)
T KOG0569|consen 374 IFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYR 452 (485)
T ss_pred HHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHH
Confidence 3333333332 4577888999999999999999999999988888777777777776665 8999999999999999999
Q ss_pred hccCccC
Q 008957 256 IKPLQLK 262 (547)
Q Consensus 256 ~~p~~~~ 262 (547)
.+||++.
T Consensus 453 ~lPETkg 459 (485)
T KOG0569|consen 453 YLPETKG 459 (485)
T ss_pred hCcccCC
Confidence 9999654
No 196
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.01 E-value=5e-10 Score=112.10 Aligned_cols=174 Identities=13% Similarity=0.010 Sum_probs=123.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeec-ccccchhHHHHHHHH
Q 008957 329 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAA 406 (547)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~ 406 (547)
.+.++......++..+.++++..+++.|+++..+.+.... ...........+..+++|+++|| +||| +.+..+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g 87 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG 87 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH
Confidence 3456666677777788888898889999888777775443 33333444455556789999999 9999 777777
Q ss_pred HHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhcCccceeeeecccCCc--chhHHHHHHHHHHHhhcCCCccchhhhh
Q 008957 407 TFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 483 (547)
Q Consensus 407 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~g~~~~~~~~~g~~~~~~~~g~l 483 (547)
.++..+..++.....+ .....+...+.+.+.+...+.....+.+.+|++ +|+.+.++.....++ |.++||.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHH
Confidence 7766666555554433 222334455566666777777788888888875 457788888888888 889999999999
Q ss_pred hcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 484 QDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
.++.| |++.|++.++..+++.+.+.
T Consensus 167 ~~~~g-w~~~F~i~~i~~~~~~~~~~ 191 (489)
T PRK10207 167 ADKFG-YSVTYNLCGAGLIIALLVYF 191 (489)
T ss_pred HHhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 99875 88888886554444444433
No 197
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.00 E-value=1.7e-09 Score=106.29 Aligned_cols=147 Identities=12% Similarity=0.022 Sum_probs=117.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh-cCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|...++.+.++.+.+++.+...++...+..+.+++.|| ++.++.+..+.++.+++.++.+++++++.+.+..++.|++.
T Consensus 232 p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~ 311 (400)
T PRK11646 232 PIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGS 311 (400)
T ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 55555554477888999888888777777677777764 66677778888888888888888888888888888999999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC---C-chhHHHHHHHHHHHHHHH
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---N-WRYAFWGEAILMLPFAVL 252 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---g-wr~~f~~~~~~~~~~~~~ 252 (547)
+...|...+++.+..|+++||+++++++....+|..+||.++|++.++. + -...+++.++.+++..+.
T Consensus 312 ~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 312 IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999999999999998653 3 245666655555554444
No 198
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.00 E-value=5.3e-10 Score=109.71 Aligned_cols=155 Identities=15% Similarity=0.069 Sum_probs=113.8
Q ss_pred HHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 008957 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 424 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (547)
........|.+.++ .+.+.... .......++..++.++.|++.||+||| +.+..+..+..+..++....++.+
T Consensus 21 ~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~ 94 (385)
T TIGR00710 21 IDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNNIE 94 (385)
T ss_pred HHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccHH
Confidence 33334445554444 55554333 555667788899999999999999999 677666666666666666667777
Q ss_pred HHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHH
Q 008957 425 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 504 (547)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 504 (547)
...+..++.+++.+...+....+..+..|++.|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+.+.++.
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 172 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAGILL 172 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH
Confidence 7777777777777777777788888888889999999999877776 88889999999888754 888887777665554
Q ss_pred HHHH
Q 008957 505 AGIW 508 (547)
Q Consensus 505 ~~~~ 508 (547)
.+..
T Consensus 173 ~~~~ 176 (385)
T TIGR00710 173 SALI 176 (385)
T ss_pred HHHH
Confidence 4443
No 199
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.97 E-value=6e-08 Score=94.70 Aligned_cols=253 Identities=13% Similarity=0.056 Sum_probs=152.5
Q ss_pred cccccccccC-----ccchhHHHHHHHHHHhhh-hhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc----c-------
Q 008957 106 SGIQGDFKLN-----NFQDGVLSSAFMVGLLVA-SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----F------- 168 (547)
Q Consensus 106 ~~i~~~~~~s-----~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----~------- 168 (547)
-++++.+.++ ...+.++-+...+..++. .++.+++++|++|++++-+....+....+++++. +
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 5567777663 357888888887777776 8999999999999999988887777777666654 1
Q ss_pred --------------------cHHHHHHHHHHhhhhhhhhhh-cccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHH
Q 008957 169 --------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 227 (547)
Q Consensus 169 --------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 227 (547)
+.|...+.-+...+......+ .-..+++|.++.+|-.|..+++..+.++|.++++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333344444555555554 67788999999999999999999999999999998888
Q ss_pred hhcC-------C-CCch----hHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCccccccc
Q 008957 228 VVGS-------H-LNWR----YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 295 (547)
Q Consensus 228 ~l~~-------~-~gwr----~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (547)
++.+ . -.|. +.+.+.++.+++. +...+.+.+.... +++... . +
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~-~~~~~~l~~~~~~--~~~~~~-~-------------------~-- 241 (472)
T TIGR00769 187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAI-ILLYWWVNRNVLT--DPRSYN-P-------------------A-- 241 (472)
T ss_pred HHHHhhhccccccChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccC--Cccccc-h-------------------h--
Confidence 8762 1 1242 2334444333333 3333333221110 110000 0 0
Q ss_pred ccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchh-hH---hhh
Q 008957 296 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM---MFG 371 (547)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~---~~~ 371 (547)
+ +++++ +...+..++++.++++|.++.+.+...+++...+.+..-.-....+.+..+.. +. .+.
T Consensus 242 ~-----~~~k~-------k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~ 309 (472)
T TIGR00769 242 L-----KEKKV-------KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFS 309 (472)
T ss_pred h-----ccccC-------CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 0 00000 11224557889999999999888888887776666554222233333322211 11 122
Q ss_pred hhhcccccccceeeeeeeeccccc
Q 008957 372 GVTIVCGIVGTISGGFILDQMGAT 395 (547)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~ 395 (547)
...++..++..++.+++.+|+|-+
T Consensus 310 ~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 310 TWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHH
Confidence 333344444555557888888876
No 200
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.97 E-value=1.9e-09 Score=102.39 Aligned_cols=148 Identities=13% Similarity=0.142 Sum_probs=130.9
Q ss_pred cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcc
Q 008957 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLA 191 (547)
Q Consensus 112 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~ 191 (547)
-+.++...|.+.+...+.-++...+..++.+|+|.|+.++++.++.++=.+++++++|.+.+.+.+.+.|+-.+......
T Consensus 254 ~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 254 AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCcchhhhH-HHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 192 APFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 192 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
..++++.+|+|-.++...+ .+.+.++|..+.+.++|.+.++.|.+..|++.+.+.++..++.++.+++
T Consensus 334 fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 334 FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 9999999999877777766 4788889999999999999999999999999999999888888888855
No 201
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.96 E-value=8.5e-10 Score=108.79 Aligned_cols=167 Identities=10% Similarity=0.033 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHH
Q 008957 333 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 411 (547)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 411 (547)
....+.+++.......+.+..| .+++.++.+.... ...+...++..++.++.|++.||+||| +.+..+.++..
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~~ 84 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLWG 84 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHHH
Confidence 3334444444444555555666 4555667776554 555677788889999999999999999 67777776666
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc-----
Q 008957 412 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH----- 486 (547)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~----- 486 (547)
+..++....++.+...+.-++.+++.+...+....++.+.+|+++|+++.++.+..... |.++++.+.+++.+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 85 IASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCCC
Confidence 66666666677777777777788888777776667778888889999999999877676 888899888888642
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 008957 487 VNNWRKTTLALTSIFFLAAG 506 (547)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~ 506 (547)
..+|+..|++.++..++..+
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGV 183 (412)
T ss_pred ccchhHHHHHHHHHHHHHHH
Confidence 12599999887766554433
No 202
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.96 E-value=2.8e-09 Score=96.50 Aligned_cols=132 Identities=6% Similarity=-0.030 Sum_probs=101.5
Q ss_pred HHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcc
Q 008957 126 FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 205 (547)
Q Consensus 126 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 205 (547)
..+.-.-|.++.+.+.||+|||+++..+.++++++.++.....+-..+.+.-+..-++.++.+.+.+.|..|.+|.+-|+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRA 469 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhh
Confidence 34556678999999999999999999999999999988776654433333333333444556678999999999999999
Q ss_pred hhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccC
Q 008957 206 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (547)
Q Consensus 206 ~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 259 (547)
...|.-+.+.-+|.++.|+++ +.....-..+..+.+..+++..+...+++-|
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeec
Confidence 999999999999999999999 3222334466667777777777777777544
No 203
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.96 E-value=8.2e-10 Score=108.56 Aligned_cols=166 Identities=14% Similarity=0.046 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHH
Q 008957 335 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (547)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (547)
.....+............+|.+.++ .+.+.... .......++..++.++.|+++||+||| +.+..+..+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~ 81 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIA 81 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHH
Confidence 3333444444445555667766655 45554333 445566778888899999999999998 6666666666666
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHH
Q 008957 414 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 493 (547)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 493 (547)
.++....++.+...+..++.+.+.+...+.....+.+..++++|+++.+..+..... +..++|.+.+.+.+..+ |+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~ 159 (392)
T PRK10473 82 SLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSL 159 (392)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHH
Confidence 555555566665555556666666666666777788888889999999999877666 77888988888877654 8888
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 494 TLALTSIFFLAAGIW 508 (547)
Q Consensus 494 ~~~~~~~~~~~~~~~ 508 (547)
+++.+++.++..++.
T Consensus 160 ~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 160 FYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888776655554443
No 204
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.94 E-value=8.9e-10 Score=111.44 Aligned_cols=168 Identities=15% Similarity=0.125 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHH
Q 008957 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 410 (547)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 410 (547)
+...++..+....-...+...+|.+..+ ++.+... ......+.++...+.++.|+++||+||| +.+..+..+.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHH
Confidence 3444555666666666777778888765 4554333 3444556677777888999999999999 7777777777
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeeccc-CCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccch
Q 008957 411 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 489 (547)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~ 489 (547)
.+..++....++.+..++.-.+.+++.+...+.....+.+.+ ++++|+++.|+....... |..+||.+.|++.++.+
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-
Confidence 777777777778887777777777777766665555555655 568999999999777766 88999999999999865
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 008957 490 WRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~ 507 (547)
|++.|++...+.++..++
T Consensus 160 wr~~f~i~~~~~~~~~~l 177 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGL 177 (495)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999988877665554443
No 205
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.93 E-value=3.4e-09 Score=102.70 Aligned_cols=154 Identities=17% Similarity=0.130 Sum_probs=124.6
Q ss_pred cccccccc-cCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-ccHHHHHH----HHHH
Q 008957 106 SGIQGDFK-LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAI----CRML 179 (547)
Q Consensus 106 ~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~----~r~l 179 (547)
+...+|.| .+....+.+.+...+.-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+ ...+
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~l 310 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLL 310 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhh
Confidence 33455666 677777888888888888999999999999999999999999999988888877 55444333 3567
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHh-hhhhhhhhhhhHHhhcCCCC------chhHHHHHHHHHHHHHHH
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGVVGSHLN------WRYAFWGEAILMLPFAVL 252 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~l~~~l~~~~g------wr~~f~~~~~~~~~~~~~ 252 (547)
+|+..+..+..+..++.+..|++.|+++.++++.. .++|..+|..++|++.+++| |...+.+.+.+.++..++
T Consensus 311 hG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~ 390 (400)
T PF03825_consen 311 HGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVL 390 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998874 68999999999999998765 445566666666666666
Q ss_pred HHhhccC
Q 008957 253 AFVIKPL 259 (547)
Q Consensus 253 ~~~~~p~ 259 (547)
.+++.+|
T Consensus 391 f~~~fk~ 397 (400)
T PF03825_consen 391 FVILFKP 397 (400)
T ss_pred HHhhccC
Confidence 6555543
No 206
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.93 E-value=9.4e-10 Score=111.60 Aligned_cols=167 Identities=14% Similarity=0.092 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHhhhccceeEeeccCchhh-HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHH
Q 008957 334 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 412 (547)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 412 (547)
...+..+.............|.+.++ .+.+... ........++..++.++.|++.||+||| +.+..+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~ 79 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTL 79 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHH
Confidence 34444555555556666677777665 4544433 3555677788899999999999999999 677777766666
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHH
Q 008957 413 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 492 (547)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 492 (547)
..++....++.+..++..++.+++.+...+....++.+.+|++.|+++.++....... |..++|.+.+++.++.+ |++
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~ 157 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRW 157 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-cee
Confidence 6666666677777777777888887777777888888989999999999998766666 88999999999998765 888
Q ss_pred HHHHHHHHHHHHHHHH
Q 008957 493 TTLALTSIFFLAAGIW 508 (547)
Q Consensus 493 ~~~~~~~~~~~~~~~~ 508 (547)
.|++.+.+.++..++.
T Consensus 158 ~f~~~~~~~~~~~~~~ 173 (485)
T TIGR00711 158 IFLINVPIGIIVVVVA 173 (485)
T ss_pred hhhhhhHHHHHHHHHH
Confidence 8887776655544433
No 207
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.93 E-value=3.3e-09 Score=106.80 Aligned_cols=150 Identities=15% Similarity=0.027 Sum_probs=104.5
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehH--------HHHHHH--HHHHHhhhc-cccHHHHHH
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG--------VGLSVW--TFATAGCGS-SFDFWSIAI 175 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~--------~~~~~~--~~~~~~~~~-a~~~~~l~~ 175 (547)
.+.+.+|.+..+.+++.++..++..++.++.|+++||+++|+... .+.... ++..+.... ..+....++
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTII 366 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 356678999999999999999999999999999999987654321 111111 111111122 334444455
Q ss_pred HHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC---CchhHHHHHHHHHHHHHHH
Q 008957 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVL 252 (547)
Q Consensus 176 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~ 252 (547)
+-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.+.+.. +|+..|++.++..++..++
T Consensus 367 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 367 ILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 55555655555555555555677665 7999999999999999999999999887643 4899999998877776665
Q ss_pred HHhhc
Q 008957 253 AFVIK 257 (547)
Q Consensus 253 ~~~~~ 257 (547)
..+..
T Consensus 446 ~~~~~ 450 (465)
T TIGR00894 446 YLIFG 450 (465)
T ss_pred eeeee
Confidence 55443
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.92 E-value=2.4e-09 Score=103.66 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=104.0
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+ +||+.+.++.++.+++.++..+.++.+... .-++.|++.
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~ 299 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQ 299 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhh
Confidence 555667899999999999999999999999999999999 566677788888888877777665543332 456789999
Q ss_pred hhhhhcccccccccCC-CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC
Q 008957 185 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 234 (547)
+...+...+.+.+..+ +++++...++.+....+|..++|.+.|++.++.|
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 300 GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9888887777765554 5667888999888888999999999999987765
No 209
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.91 E-value=2.1e-09 Score=104.69 Aligned_cols=158 Identities=16% Similarity=0.093 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHH
Q 008957 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 410 (547)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 410 (547)
++...+..+........+..+.|.++++.++.+.... .......++..++.++.|++.||+||| +.+..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~ 77 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLLL 77 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 4555666666666677777888876777788876554 555677788999999999999999999 6666666666
Q ss_pred HHHHHHHHHhh-hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc---
Q 008957 411 AISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--- 486 (547)
Q Consensus 411 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--- 486 (547)
.+..++....+ +.+..++..++.+++.+ .+.+....+.+..++++|+++.++.....+. |..+++.+.+.+...
T Consensus 78 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~~~~~ 155 (366)
T TIGR00886 78 AIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIGSLIF 155 (366)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHh
Confidence 66666655556 66666666666665533 3455666777888889999999998755555 666666666555432
Q ss_pred ------cchhHHHHHH
Q 008957 487 ------VNNWRKTTLA 496 (547)
Q Consensus 487 ------~~~~~~~~~~ 496 (547)
..+|++.+++
T Consensus 156 ~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 156 GAGLPAHLAWGWAFVI 171 (366)
T ss_pred cccccccccccchhHH
Confidence 1247777733
No 210
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.90 E-value=1.2e-08 Score=100.00 Aligned_cols=148 Identities=11% Similarity=0.047 Sum_probs=116.6
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~ 186 (547)
.+++.+|.++.+.|++.+.+.++..++++..+++.||+++|+++..+. +.++..++.++.++++..++.-++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 355678999999999999999999999999999999999999888875 4445555556677888778888899999998
Q ss_pred hhhcccccccccCCCCC-cchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 187 FISLAAPFIDDNAPVPQ-KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
..+...+.+.+..|++. +|++.++.+...++|..++..+.+.+ ..+|-|..+++.+...++...+.+.+
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888766654 79999999999999999999988866 45666666666544444444444333
No 211
>PRK11043 putative transporter; Provisional
Probab=98.90 E-value=2.5e-09 Score=105.45 Aligned_cols=157 Identities=16% Similarity=0.063 Sum_probs=106.5
Q ss_pred HHHHHhhhccce--eEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 008957 345 VIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 421 (547)
Q Consensus 345 ~~~~~~~~~p~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (547)
.+.....+.|.+ +.+..+.+.... ...++..++..++.++.|+++||+||| +.+..+..+..+..++....+
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHhc
Confidence 333444455544 334456665443 455677788899999999999999999 666666666555555555556
Q ss_pred hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHH
Q 008957 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 501 (547)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 501 (547)
+.+...+..++.+++.+...+.......+.++++.++...+..+..... +..++|.+.+++.+..+ |+..+++.+.+.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~ 170 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAIT 170 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Confidence 6666665556655555444444455667778888888888887666665 77889999999988765 888888777666
Q ss_pred HHHHHHH
Q 008957 502 FLAAGIW 508 (547)
Q Consensus 502 ~~~~~~~ 508 (547)
++..+..
T Consensus 171 ~~~~~~~ 177 (401)
T PRK11043 171 LLLILPT 177 (401)
T ss_pred HHHHHHH
Confidence 5544433
No 212
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.1e-08 Score=95.21 Aligned_cols=147 Identities=16% Similarity=0.046 Sum_probs=121.6
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc-------cHHH----HH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWS----IA 174 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-------~~~~----l~ 174 (547)
..++++|++++.+.|.....+.+...+..+.+|+++||+|.+|++.+....++++..+..+.+ +... ++
T Consensus 243 ~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 322 (417)
T COG2223 243 MYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFL 322 (417)
T ss_pred HHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999998888877653 3443 44
Q ss_pred HHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHHHHHHH
Q 008957 175 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLA 253 (547)
Q Consensus 175 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~ 253 (547)
...++.|+|.| ....++..++|+ +-|.+.|+.....++|...-|..-+...+..| +...|++.....+++.+..
T Consensus 323 ~l~~~~G~GnG----svfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 323 ALFVFAGLGNG----SVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred HHHHHhccCcc----hheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 45555566555 566778888776 58999999999999999888888777776666 9999999998888888877
Q ss_pred Hhhc
Q 008957 254 FVIK 257 (547)
Q Consensus 254 ~~~~ 257 (547)
+...
T Consensus 398 ~~~y 401 (417)
T COG2223 398 WALY 401 (417)
T ss_pred HHHH
Confidence 7665
No 213
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.88 E-value=4.6e-10 Score=105.13 Aligned_cols=151 Identities=11% Similarity=0.094 Sum_probs=125.0
Q ss_pred ccCchh-hHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Q 008957 361 YHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 439 (547)
Q Consensus 361 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (547)
++.++. ..++.....+...+..+++|++.||+.|+ .++..+..+-....+...+....|...++=.+.|.+-+.
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 444443 33566777888899999999999999999 677777777777766666667788888888899999999
Q ss_pred cCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 008957 440 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSI 517 (547)
Q Consensus 440 ~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (547)
..+..+.++.+.++.+.|++++++++..... |..+|-.+...+.+..+.|+++|...+++.++..++.++....|+|
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999999999999999999998888 9898888888888888889999999999988887777765544444
No 214
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.85 E-value=9e-08 Score=92.37 Aligned_cols=332 Identities=13% Similarity=0.110 Sum_probs=177.7
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc------c--c----c---HHHHHHHHHHhhh-
Q 008957 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------S--F----D---FWSIAICRMLVGV- 182 (547)
Q Consensus 119 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a--~----~---~~~l~~~r~l~G~- 182 (547)
.+...-.-.+...++++..|.+.||..|.+++..+.+..-++..+++. . + + +..+++.-.+.|.
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 344444556677788899999999999999887776554333332221 1 1 1 1222222222232
Q ss_pred hhhhhhhcccccccccCC------CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 183 GEASFISLAAPFIDDNAP------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
..=.......++=.||.. ++.+.+..+...-.=-+.-+++|++.|.+.+..+.+....+.++..++..++-+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 221222233344456643 23344455555555557789999999999998899999888888888877766665
Q ss_pred ccCc----cCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchh
Q 008957 257 KPLQ----LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 332 (547)
Q Consensus 257 ~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (547)
+... +.-..++++.+....++ ++ ....+.......+...+..++...+++..++.+.+
T Consensus 200 l~~VY~~~P~L~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vf 261 (432)
T PF06963_consen 200 LARVYNSVPALAVKKRSSESESSSD---------------EE---SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVF 261 (432)
T ss_pred HHHHHHhChHhcCCCCCcccccccc---------------cc---ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHH
Confidence 5221 11111111100000000 00 00000011111112223344455667777887766
Q ss_pred HHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHH
Q 008957 333 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 411 (547)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 411 (547)
..... ..+.++..-++...+..|+.+. +.++... .+-.+..+.++.|.++..++.+|+|..+... .-+..-..+.
T Consensus 262 las~a-lalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~--~~l~~q~~~L 337 (432)
T PF06963_consen 262 LASFA-LALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGL--WSLWWQWVCL 337 (432)
T ss_pred HHHHH-HHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHH--HHHHHHHHHH
Confidence 65444 3333333444455555566665 5554333 3345666778889999999999999764321 1122222222
Q ss_pred HHHHHHHHhh-------hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhc
Q 008957 412 ISCLTAFCLS-------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (547)
Q Consensus 412 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (547)
..+...++.+ +...++..+.+.-++.-+.--....+++|.+|+++||+..|+-+...+.+.
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ 405 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFE 405 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHH
Confidence 2332222222 122222333333333333444456678888999999999999988887744
No 215
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.84 E-value=2.9e-09 Score=97.04 Aligned_cols=143 Identities=15% Similarity=0.142 Sum_probs=100.3
Q ss_pred hHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCcccee
Q 008957 367 DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 446 (547)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (547)
+..+.+.+.++..+..+..|.++||+||| .++.++.+..++..++.....+. ..++..=+.+....+-.....+
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~kgnl~v~rA 143 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIFKGNLSVIRA 143 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccCchHHHHH
Confidence 34566778899999999999999999999 78877777777766666666666 3333322333344455667888
Q ss_pred eeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc---ccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 008957 447 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 516 (547)
Q Consensus 447 ~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (547)
+++|.+++++|+.+++..++..++ |.++||.++|++.. ..|.|..++-...++.+...-......++||
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999888777 99999999999987 5565544332333333332213333335555
No 216
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.84 E-value=3.1e-09 Score=103.93 Aligned_cols=149 Identities=15% Similarity=0.147 Sum_probs=110.8
Q ss_pred hhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 008957 351 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 429 (547)
Q Consensus 351 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (547)
..+|.+.++ ++.+.... .......++..++.++.|++.||+||| +.+..+.++..+..++....++.+...+.
T Consensus 12 p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 12 PALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred ccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 444555554 55664443 445667788889999999999999998 67777776666666666666666767777
Q ss_pred HHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 008957 430 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 507 (547)
.++.+++.+...+.......+..++++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+.+.++..++
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHH
Confidence 77777777766677777888888889999999999777666 88889999999988765 878887777665554443
No 217
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.83 E-value=5.6e-09 Score=101.80 Aligned_cols=146 Identities=10% Similarity=0.032 Sum_probs=97.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHH
Q 008957 330 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 408 (547)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 408 (547)
+.++...+........-+.+....+.+.+..++.+..+. .+.+++.++..++++..|++.||+|.| +++..+.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~l 108 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFSTA 108 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHH
Confidence 455555555444444444444445555554577776555 455677788888889999999999999 66666666
Q ss_pred HHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhh
Q 008957 409 LGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 482 (547)
Q Consensus 409 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~ 482 (547)
+..+..++.... ++.+.++++-++.+++ +..+++....+.+.+|+++||++.|+.....+. |..+++.+.+.
T Consensus 109 l~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~-G~~l~~~l~p~ 185 (462)
T PRK15034 109 ILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL-GVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 555555554443 5666777777777775 556677777788888889999999998544444 55544444433
No 218
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.82 E-value=8.4e-09 Score=101.50 Aligned_cols=147 Identities=11% Similarity=0.025 Sum_probs=98.9
Q ss_pred hhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Q 008957 351 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 429 (547)
Q Consensus 351 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (547)
...|.+.+ ..+.++... .......++..++.++.|+++||+||| +.+..+..+..+..+.....++.+..++.
T Consensus 29 p~~~~i~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (394)
T PRK11652 29 PAIADMAR-DLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAHSLTVLIAA 102 (394)
T ss_pred ccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34454444 355555443 455667788899999999999999999 66666655555555555555666666666
Q ss_pred HHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHH
Q 008957 430 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 505 (547)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 505 (547)
..+.+++.+...+.......+..+++.++.+.+..+..... +..++|.+.+.+.+..+ |+..+.+.++..++..
T Consensus 103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 103 SAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHH
Confidence 56666555544343444455666678889998888665555 77889999999888755 8888887766554433
No 219
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.81 E-value=2.5e-08 Score=89.61 Aligned_cols=371 Identities=12% Similarity=0.018 Sum_probs=221.7
Q ss_pred cccc-cccccCccchh-HHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhh
Q 008957 106 SGIQ-GDFKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (547)
Q Consensus 106 ~~i~-~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~ 183 (547)
|.+. .+-|+|..++. -+.-...-.+.+.-++.=.+.|..-.|+++++-.+.......+.-+.++.+.+=+.-++-|..
T Consensus 29 pyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~ 108 (433)
T KOG3810|consen 29 PYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPA 108 (433)
T ss_pred hhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChH
Confidence 4443 45567666542 333344455566667777799999999999999888888999999999999999999999998
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC--CchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
.+ ...+-++++-+..+|+++.++.+...+..-.|..+|..++..+++.. +++..-.+.-.. ..++.+..+++|..+
T Consensus 109 tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~-~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 109 TA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAE-VTIAVLLALFLPRVK 186 (433)
T ss_pred HH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHH-HHHHHHHHhhCCCCc
Confidence 87 45668999999999999999999999999999999999998887543 344444444322 233333344444432
Q ss_pred CCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHH
Q 008957 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (547)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (547)
+..--.++++... .. + .++..... +............++++.+..++|.+..-.+-+.+
T Consensus 187 rSl~f~~~~~~~~-------v~----~---~e~~~~~~-------~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl 245 (433)
T KOG3810|consen 187 RSLYFHRLEDKIS-------VG----D---LEEMNPQA-------SYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWAL 245 (433)
T ss_pred hhhhhhcccccce-------ec----c---chhcCccc-------hhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHH
Confidence 2110000000000 00 0 00000000 00000112334556677788888888777777777
Q ss_pred HHHHHHHHhhhccceeEeeccCchhh---HhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 342 YNFVIGAYSYWGPKAGYNIYHMSNAD---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (547)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (547)
...+++-+.+|....-.+.- .++.. ...=++..+.++++.+..|.+--.+.|... .++.++...-+...+.+.
T Consensus 246 ~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~---~ll~~~s~~~agllf~m~ 321 (433)
T KOG3810|consen 246 ASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD---LLLAVGSAVQAGLLFIMA 321 (433)
T ss_pred hhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH---HHHHHHHHHhhhhhhhhh
Confidence 76666666665544433332 11111 112234445666777788887655555421 344444444455555555
Q ss_pred HhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccc----------
Q 008957 419 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---------- 488 (547)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~---------- 488 (547)
...+.|...+...+.........+.....++.....+.-|-..|+...+.-++- .++.-.+.|..|
T Consensus 322 ~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQ----silT~iVvd~~g~~L~ir~Q~~ 397 (433)
T KOG3810|consen 322 QTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQ----SILTLIVVDDRGLGLDIRTQFV 397 (433)
T ss_pred cccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHH----HhheEEEEcccccCCCcceeEE
Confidence 566777777777777666666666666667777777888888887644333322 222223333211
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 008957 489 NWRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~ 507 (547)
-|..-|.+.+.+.++...+
T Consensus 398 ~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 398 VYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred EEeehHHHHHHHHHHHHHH
Confidence 2334466666666665544
No 220
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.81 E-value=9.8e-09 Score=97.57 Aligned_cols=144 Identities=22% Similarity=0.352 Sum_probs=120.3
Q ss_pred cccccccccCc--cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcccc--HHHHHHHHHHhh
Q 008957 106 SGIQGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~--~~~l~~~r~l~G 181 (547)
+.+..+++.+. .+.++..+.+.++..++.++.|.+.||+|||+.++.+.....++.++.++..+ .+.+++.|+++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 105 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 55666666555 47899999999999999999999999999998888888776666777777766 899999999999
Q ss_pred hhhhhhhhcccccccccCCC-CCcchhhhHHHH-hhhhhhhhhhhhHHhhcCC--CCchhHHHHHHHHHHHH
Q 008957 182 VGEASFISLAAPFIDDNAPV-PQKTAWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPF 249 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~~ 249 (547)
++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+||+.|.+........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999999999999998 678999999888 5888889998877766643 67999777776655443
No 221
>PRK10133 L-fucose transporter; Provisional
Probab=98.80 E-value=3.2e-08 Score=98.18 Aligned_cols=137 Identities=10% Similarity=-0.132 Sum_probs=112.8
Q ss_pred ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhh
Q 008957 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (547)
Q Consensus 109 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~ 188 (547)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++..++.++..+.++.+ -+..-++.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999888877777766666643 3456678899999999
Q ss_pred hcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC-chhHHHHHHHHHHH
Q 008957 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLP 248 (547)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~ 248 (547)
|...+...+..+++ .+.+.++... ..+|..++|.+.|.+.+..| -|..|++..+..+.
T Consensus 366 P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 366 PTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 99999999998764 6777787765 44678888889999988887 78888876544433
No 222
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.79 E-value=2.3e-09 Score=76.31 Aligned_cols=77 Identities=27% Similarity=0.317 Sum_probs=72.4
Q ss_pred CCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHH
Q 008957 98 DKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 174 (547)
Q Consensus 98 ~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 174 (547)
||.|.|.+|.+++|.++|.++.|++.++.++||.+|.+...++.++..+++.+..+++...+..+.+++.++++.+.
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 67888999999999999999999999999999999999999999998889999999999999999999999887653
No 223
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.79 E-value=2.4e-08 Score=93.54 Aligned_cols=125 Identities=16% Similarity=0.152 Sum_probs=96.9
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh----hcCCceehHH-HHHHHHHHHHhhhccccHH---------
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGV-GLSVWTFATAGCGSSFDFW--------- 171 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~a~~~~--------- 171 (547)
|+..+++|++....+.+--.--+...+.+++.|..+| ||||||.++. +.+...++.++..++.++.
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 6777889999999999988889999999999999999 5898776554 5566666777777664432
Q ss_pred --------HHHHHHHHhhhhhhhhhhcccccccccCCCCCcch-hhhHHHHhhhhhhhhhhhhHHhhc
Q 008957 172 --------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVVG 230 (547)
Q Consensus 172 --------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~l~~~l~ 230 (547)
.++++--+.=++.-.....+-+++.|...++++.+ +.+.+..+.++|.++|..+++++.
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 23334444444565777789999999998766666 999999999999999999887443
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.79 E-value=5.5e-08 Score=96.69 Aligned_cols=121 Identities=17% Similarity=0.209 Sum_probs=107.1
Q ss_pred cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhhhhhhhh
Q 008957 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 112 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~~~~~ 189 (547)
++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+
T Consensus 256 l~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~ 334 (428)
T PF13347_consen 256 LGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFV 334 (428)
T ss_pred hcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccc
Confidence 4444 6778889999999999999999999999999999999999999999988886 999999999999999999999
Q ss_pred cccccccccCCC-------CCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC
Q 008957 190 LAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL 233 (547)
Q Consensus 190 ~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 233 (547)
...++++|..+. ++.|...+..+....+|..+++.+.+.+.+..
T Consensus 335 ~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 335 IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred ccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999873 34588889999999999999998888775433
No 225
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.78 E-value=8.9e-09 Score=101.58 Aligned_cols=141 Identities=12% Similarity=0.089 Sum_probs=100.5
Q ss_pred eccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 008957 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (547)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (547)
.++.+.... ...+++.++..++.++.|+++||+||| +.+..+.++..+..++....++.+..++.-++.+++.+
T Consensus 45 ~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~ 119 (413)
T PRK15403 45 DFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSIC 119 (413)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 345554333 444666788888999999999999999 67766666666666666666677666666666666555
Q ss_pred hcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHH
Q 008957 439 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 507 (547)
...+.......+.+++++++++.++.+....+ |..+||.+.+.+.+.. +|+..|++.+++.++..+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFV-HWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHH
Confidence 43333444556667778899999998777776 8888998888888765 4889998887766655443
No 226
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.78 E-value=2.7e-08 Score=95.02 Aligned_cols=148 Identities=18% Similarity=0.109 Sum_probs=134.0
Q ss_pred ccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhh
Q 008957 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (547)
Q Consensus 109 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~ 188 (547)
.+|++-.+...|........|-++.-++.+++..|+|+-+++.+++.+..+=.+..++.+|.|+.+-..+++|+..+..+
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 46667777778888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccCCCCCcchhhhHHHH-hhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 189 SLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.++.+|++...||+-|..+-++.+. ..++|--+|.++||.+...+|=|..|.+.++.+++.+++...+
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998865 4678999999999999999999999999999888776655544
No 227
>PRK09848 glucuronide transporter; Provisional
Probab=98.78 E-value=1.9e-08 Score=100.72 Aligned_cols=128 Identities=9% Similarity=0.046 Sum_probs=103.0
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEA 185 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~ 185 (547)
+++.+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~ 334 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG 334 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 3445676655445555555677888999999999999999999999999888887776654 67777778889999999
Q ss_pred hhhhcccccccccCCCC-------CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc
Q 008957 186 SFISLAAPFIDDNAPVP-------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 235 (547)
...+...++++|..|.+ ++|...++.+....+|..+|+.+.+.+.+..|+
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999888754 358899999999999999999988877644444
No 228
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.77 E-value=1.2e-08 Score=98.76 Aligned_cols=111 Identities=9% Similarity=-0.035 Sum_probs=94.5
Q ss_pred cccccccccCccchhHHHHHHH-HHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc-----------ccHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----------FDFWSI 173 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----------~~~~~l 173 (547)
|...+++|.+..+.+.+.++.. ++..++.+++|++.||+|||+.++.+.++.+++..+..+. ++++.+
T Consensus 233 ~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (356)
T TIGR00901 233 TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLML 312 (356)
T ss_pred HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHH
Confidence 4444558999999999888766 6788999999999999999999999888888776655442 456778
Q ss_pred HHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhh
Q 008957 174 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 216 (547)
Q Consensus 174 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 216 (547)
..+.++.+++.+...+...+++.|.+|+++||+.+++++...+
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 313 FLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 8889999999999999999999999999999999999987664
No 229
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.75 E-value=7.1e-08 Score=96.42 Aligned_cols=125 Identities=10% Similarity=-0.017 Sum_probs=111.1
Q ss_pred cccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc----------cccHHHHHHHHHH
Q 008957 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRML 179 (547)
Q Consensus 110 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------a~~~~~l~~~r~l 179 (547)
+++|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+.... .++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 578999999999999999999999999999999999999999999999998866431 1344455667788
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 234 (547)
.+++.+........++.+..|++.+|...+++.+..++|..+++.+++.+.++.|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999887665
No 230
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.74 E-value=9.8e-09 Score=84.47 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=95.6
Q ss_pred hhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeeccc
Q 008957 373 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 452 (547)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (547)
...++.+++.++.+++.||++|| +.+.....+.....+.....++.+...+...+.+++.+...+.......+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 34566778888999999999998 5665555555555555545566666666777777777777777777888888
Q ss_pred CCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 453 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 453 ~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
|++.|+++.++.+...+. |..++|.+.+.+.+..+ |+..+.+.+.+.++..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILL 134 (141)
T ss_pred ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHH
Confidence 889999999999877776 88899999999988754 7677777666655544443
No 231
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.72 E-value=7.9e-08 Score=96.73 Aligned_cols=121 Identities=19% Similarity=0.116 Sum_probs=97.0
Q ss_pred CccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc-----cccHHHHHHHHHHhhhhhhhhhh
Q 008957 115 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 115 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677778777899999999999999999999999888877766655432 35567777888889999999999
Q ss_pred cccccccccCC-------CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc
Q 008957 190 LAAPFIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (547)
Q Consensus 190 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 235 (547)
...++++|..+ .++.|..++......-+|..+++.+.|++.+..|+
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999966 33346688999999999999999999887654443
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.71 E-value=2.6e-08 Score=91.59 Aligned_cols=150 Identities=12% Similarity=0.115 Sum_probs=126.8
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC--CceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~ 185 (547)
+.+.+..+..++|...--..+.+.++..+.|.++||++ |-.....+++..++.+....+++++.++++-++..|++.+
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIG 376 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHH
Confidence 56677766679999999999999999999999999999 6555566677777777777899999999999999888888
Q ss_pred hhhhcccccccccCCCC------CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 186 SFISLAAPFIDDNAPVP------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
.........+.+..+.+ -.|...++...++++|..+||.++|.+.+..|++|...+.++..++.+.++.++.
T Consensus 377 ~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 377 LADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred HHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777666666666543 3468889999999999999999999999999999999999999999888777664
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.69 E-value=1.1e-07 Score=97.34 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=124.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh-cCCceehHHHHHHHHHHHHhhhcccc--------HHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFD--------FWSIAIC 176 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~--------~~~l~~~ 176 (547)
..+.+.+|.+.+....+...+....-+..+++|.++|+ +||+++++++.++..+|.++.+++.. ...++++
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~g 91 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLG 91 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHH
Confidence 34556688888888899999999999999999999996 59999999999999999988876421 2346677
Q ss_pred HHHhhhhhhhhhhcccccccccCCCC---CcchhhhHHHHhhhhhhhhhhhhHHhhcCC-------CCchhHHHHHHHHH
Q 008957 177 RMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILM 246 (547)
Q Consensus 177 r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~ 246 (547)
-.+.++|.|+.-|...+...|.++++ +|-..+.++..+.++|..+++++.+++.+. .+|...|.+.++..
T Consensus 92 LaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m 171 (654)
T TIGR00926 92 LALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILM 171 (654)
T ss_pred HHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHH
Confidence 88888999999999999999999764 366788999999999999999998888633 36999999998887
Q ss_pred HHHHHHHHhhc
Q 008957 247 LPFAVLAFVIK 257 (547)
Q Consensus 247 ~~~~~~~~~~~ 257 (547)
++..++.....
T Consensus 172 ~ia~lvf~~g~ 182 (654)
T TIGR00926 172 ILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHhc
Confidence 77666555433
No 234
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.68 E-value=1.2e-07 Score=91.63 Aligned_cols=143 Identities=8% Similarity=-0.082 Sum_probs=100.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCc---eehH-HHHHHHHHHHHhhhccccHHHHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF---RLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr---~~l~-~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (547)
|.+.++.|.+.. .+...++..+...++ .++++||..|| +... ...++.+++..+.+++.+.+..++.-.+.|
T Consensus 216 p~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~ 291 (368)
T TIGR00903 216 EAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAG 291 (368)
T ss_pred HHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 555566676653 455555555544444 57788877654 3323 234444444445555555555555666777
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
++.....+...++.+|.+|++.|+++.|+.+....+|.+++|++.+.+.. +-+..|.+.+++.++.++..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 292 LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788899999999999999999999999999999998887763 678888888888887777654
No 235
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.68 E-value=3e-08 Score=98.95 Aligned_cols=181 Identities=14% Similarity=0.105 Sum_probs=121.8
Q ss_pred hcccchhHHHHHHHHHHHHHHH----HHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHH
Q 008957 326 LLQEKVYVVNVLGYIAYNFVIG----AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFK 401 (547)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 401 (547)
.+++++++..+....+.....+ .....++.+..+.++.+. ...+.....++..++.++.|+++|.+||| .
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~-~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~ 109 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDN-WSWFSTAWTLASAVSFPFVGRLSDLFGRR-----Y 109 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCcc-chHHHHHHHHHHHHHHHhhHHHHHHhcch-----H
Confidence 3456666655543333332221 122334455555555433 33444556677888889999999999999 8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhh
Q 008957 402 LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (547)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g 481 (547)
.++.+.++..+..+.....++...++....+.+++.+... .....+.|..|.+.|..+.++... ..+....++|.+..
T Consensus 110 ~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~-~~i~~~~~~~~ia~ 187 (599)
T PF06609_consen 110 FFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASI-PFIITTWISPLIAQ 187 (599)
T ss_pred HHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHH-HHHhhhcccHHHHH
Confidence 8889999999988888888888888888888877755443 344457888888999888877643 34445556777766
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008957 482 VLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLK 515 (547)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (547)
.+..+ ++||+.|++.++...++.++.++.++.|
T Consensus 188 ~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 188 LFAAH-SGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HhccC-CCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 65544 5799999999887777666555444333
No 236
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.68 E-value=2.8e-08 Score=97.69 Aligned_cols=167 Identities=8% Similarity=0.023 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHH
Q 008957 333 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 411 (547)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 411 (547)
.......+...+.........|.+ ++.++.+..+. .+.+...++..++.+..|++.||+|+| +.+..+..+..
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~~ 79 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLYA 79 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHH
Confidence 344444444454444445566655 55567775444 555677889999999999999999999 67766666665
Q ss_pred HHHHHHHH---hhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc--
Q 008957 412 ISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-- 486 (547)
Q Consensus 412 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-- 486 (547)
+..++... .++.+.+++..++.+.+.+...+.......+..+++.|++..++.+...+. |..++|.+.+.+...
T Consensus 80 ~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~~~~~ 158 (410)
T TIGR00885 80 LGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLILSNL 158 (410)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC
Confidence 55544322 235666667777788888888777777777778888999999998877777 888899888777422
Q ss_pred -----------------------cchhHHHHHHHHHHHHHHHH
Q 008957 487 -----------------------VNNWRKTTLALTSIFFLAAG 506 (547)
Q Consensus 487 -----------------------~~~~~~~~~~~~~~~~~~~~ 506 (547)
..+|+.+|++.+++.++..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 159 PHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred ccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12477788777776554433
No 237
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.64 E-value=5.4e-08 Score=93.38 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=106.2
Q ss_pred hhhccceeEeeccCchhh-H-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 008957 350 SYWGPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 427 (547)
Q Consensus 350 ~~~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (547)
.+..| ++.+.++.+..+ . .+...+..+..+..+++|++.||+|.| +++..+.+...+..++..+.++...+.
T Consensus 46 s~a~p-~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 46 SFITP-YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred HHHHH-HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 444467777655 3 555677788899999999999999999 788888888888887777777888888
Q ss_pred HHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHH
Q 008957 428 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 492 (547)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 492 (547)
++-++.|++.+..+ ....++..-+|+++|+++.|+.+....+ |.++++++.+++. .+| |+.
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll~-s~g-Wr~ 180 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLLV-TLG-WIS 180 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-hcC-chh
Confidence 88889999988888 7888888889999999999999877777 9899999998854 334 543
No 238
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.64 E-value=2.3e-07 Score=84.70 Aligned_cols=152 Identities=18% Similarity=0.120 Sum_probs=124.7
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
|.|..|-|+|..+.|++.+...+.....++....+++|. .+|+..+...+++.+|.+.+.+.+.-..++. -++.|+|.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~ 310 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQ 310 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCcc
Confidence 889999999999999999999999999999999999976 6888888889999999988888776544444 49999999
Q ss_pred hhhhhcccccccccCCC-CCcchhhhHHHHhhhhhhhhhhhhHHhhcCCC-CchhHHHHHHHHHHHHHHHHHhhcc
Q 008957 185 ASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKP 258 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p 258 (547)
|..++.+..++.+-.+. ++-++..++.+....+=..+||.+.|++-|.. +|+..++..+...+.+.+..+..-|
T Consensus 311 G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 311 GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcch
Confidence 99999999999988764 44445555556555555667899999998765 4999999998888877777766543
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.60 E-value=4.3e-07 Score=90.75 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=93.8
Q ss_pred chhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc--cccHHHHHHHHHHhhhhhhhhhhcccccc
Q 008957 118 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS--SFDFWSIAICRMLVGVGEASFISLAAPFI 195 (547)
Q Consensus 118 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~G~~~~~~~~~~~~~i 195 (547)
..+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+ .++.+.+++..++.|++.+...+...+++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ 344 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMF 344 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777888889999999999999999999888766654433222 35777788888999999999999999999
Q ss_pred cccCCC-------CCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc
Q 008957 196 DDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (547)
Q Consensus 196 ~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 235 (547)
+|..+. ++.|...+..+....+|..+|+.+++.+.+..|+
T Consensus 345 ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 345 SDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 998862 2345677888888999999999999988765555
No 240
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.59 E-value=2.9e-09 Score=106.81 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=108.9
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh--c--cc------cHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--S--SF------DFWSIAI 175 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--a~------~~~~l~~ 175 (547)
+.+.+..+.+.. -.......+...++.++...+.||+|||++++.+.++.+++.+..+ + .+ +...+..
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 667777777666 2223344455566777778999999999999999999888887764 1 11 1222222
Q ss_pred HHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHh
Q 008957 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 176 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
.............+....+..|.+|.+.|+++.++......++..+++.+...+.+..+-...+++.++.+++..+..++
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 22111112213446667888999999999999999999999999999988888877666346677777777777778888
Q ss_pred hccCccC
Q 008957 256 IKPLQLK 262 (547)
Q Consensus 256 ~~p~~~~ 262 (547)
+.||+..
T Consensus 435 ~lpET~g 441 (451)
T PF00083_consen 435 FLPETKG 441 (451)
T ss_pred EEeeCCC
Confidence 8888543
No 241
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.58 E-value=7.7e-06 Score=74.97 Aligned_cols=353 Identities=9% Similarity=-0.013 Sum_probs=182.1
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh-
Q 008957 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK- 142 (547)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d- 142 (547)
++-+..+.+.+.+.+.-....+ ++|.+.+.=|.|.++.+...-++.= ..--++|.++.|
T Consensus 30 ~~~illLl~LYllQGiP~GL~~------------------~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs 89 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG------------------AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDS 89 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh------------------hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHH
Confidence 3445566666777666555544 2277777778887777665443321 234678899999
Q ss_pred ----hcCCceehHH-HHHHHHHHHHhhh-----------ccccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcch
Q 008957 143 ----SHNPFRLIGV-GLSVWTFATAGCG-----------SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 206 (547)
Q Consensus 143 ----r~Grr~~l~~-~~~~~~~~~~~~~-----------~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 206 (547)
|+||||.-++ +..+.+..+.+.+ -.++...+...-++.-+..+.-..+.-.+.-....+++-|.
T Consensus 90 ~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgy 169 (510)
T KOG3574|consen 90 VYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGY 169 (510)
T ss_pred HHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCc
Confidence 9999985322 2233333222222 12344444344455555666666666666667778888888
Q ss_pred hhhHHHHhhhhhhhhhhhhHHhhcC-------CCCch---------hHHHHHHHHHHHHHHHHHhhccCccCCCCCCCcc
Q 008957 207 WLSMFYMCIPTGVALGYVYGGVVGS-------HLNWR---------YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 270 (547)
Q Consensus 207 ~~~~~~~~~~~G~~~g~~l~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 270 (547)
+......+.+.|..++..+--.+.+ ..+|. .-++..+.+.++...+..+..+|.+..
T Consensus 170 aST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~------- 242 (510)
T KOG3574|consen 170 ASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES------- 242 (510)
T ss_pred hhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh-------
Confidence 8777777777777666554322222 01121 223334444444444554443221111
Q ss_pred ccccccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHh
Q 008957 271 KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS 350 (547)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (547)
.. ++.+ ...++..+.++++++-|....+.......-.++.+-.
T Consensus 243 --~~------------------~e~~-----------------~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~d 285 (510)
T KOG3574|consen 243 --VD------------------EELE-----------------LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAAD 285 (510)
T ss_pred --hh------------------hhhh-----------------cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhh
Confidence 00 0000 1222333556677777777777766666666666655
Q ss_pred hhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccc--cchh--HHHHHHHHHHHHHHHHHHHHHhhh---
Q 008957 351 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGA--TISN--AFKLLSAATFLGAISCLTAFCLSS--- 422 (547)
Q Consensus 351 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--- 422 (547)
...+.-+.+. +.+.... +.. +..++..++.++...|+-. |+.. .+.+. .=........++....++
T Consensus 286 a~t~LkLle~-Gv~ke~Lal~~----v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~-~R~~~~~~~t~Lv~~~~~~~~ 359 (510)
T KOG3574|consen 286 ALTSLKLLEH-GVPKEELALIA----VPLVPLQIALPLYIGKWTAGPRPLNVFLKAVP-YRLGGGLVQTALVWWTPTLGH 359 (510)
T ss_pred hccchHHHHc-CCChhHheeee----eehhhHHHhhhhhheeecCCCCcchHHHHhhh-HHHHHHHHHHHHHhhhccccc
Confidence 5555555553 3333222 222 3333333333333333322 1100 00111 111111111112111111
Q ss_pred ---------HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhccc
Q 008957 423 ---------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 487 (547)
Q Consensus 423 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 487 (547)
....+....+..++....+...+...++..+|..-|+-+.+.|+..++ |+-.-..+..++.|..
T Consensus 360 ~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 360 SDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADGL 432 (510)
T ss_pred CCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhcccC
Confidence 111122233444444555556677788888999999999999999999 5554455777777754
No 242
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.57 E-value=2e-07 Score=91.81 Aligned_cols=168 Identities=13% Similarity=0.024 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeec----ccccchhHHHHHHHHHHHH
Q 008957 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSAATFLG 410 (547)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~~~~~~ 410 (547)
....+...+.+.....+++.|+++ .+.+.... ....+..+.+++..++.|+++|| +|||+ ..++.+....
T Consensus 10 ~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr----p~il~g~~~~ 84 (477)
T TIGR01301 10 ASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR----PFIAAGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH----HHHHHHHHHH
Confidence 333444455555666666667655 45554333 44456668888999999999995 88884 3443334444
Q ss_pred HHHHHHHHHhhhH-----------------HHHHHHHHHHHHHHhhcCccceeeeecccCCcch--hHHHHHHHHHHHhh
Q 008957 411 AISCLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSIHIF 471 (547)
Q Consensus 411 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~g~~~~~~~~~ 471 (547)
....+++....+. +..++.+.+..++.....++..+++.|..|+++| +.+.++.+...++
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l- 163 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI- 163 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH-
Confidence 3443333332221 2223333444556667777888899999998654 5788887766666
Q ss_pred cCCCccchhhhh--hccc------------chhHHHHHHHHHHHHHHHHHHH
Q 008957 472 GDVPSSPLVGVL--QDHV------------NNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 472 g~~~~~~~~g~l--~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
|.++|+.+.+.. .+.. .+++..|++.+++.+++.+...
T Consensus 164 G~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~ 215 (477)
T TIGR01301 164 GNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIAL 215 (477)
T ss_pred HHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHe
Confidence 888888766654 1111 1456677776665555444433
No 243
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.54 E-value=8.1e-08 Score=99.20 Aligned_cols=151 Identities=9% Similarity=-0.039 Sum_probs=101.7
Q ss_pred hhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhh--------
Q 008957 351 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-------- 421 (547)
Q Consensus 351 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 421 (547)
..++. +++.++.+.... .+.+...++..++.++.+++.||.+|+ +++..+.++..+..++....+
T Consensus 54 ~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 54 SSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred hhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCccc
Confidence 33443 444566664443 556677788899999999999999998 555555555555444433221
Q ss_pred -------------------------------------------hHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchh
Q 008957 422 -------------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRA 458 (547)
Q Consensus 422 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 458 (547)
....+++.-++.|++.+..++....++.+.++++.|+
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 1123344556666666677777788888889999999
Q ss_pred HHHHHHHHHHHhhcCCCccchhhhhhccc---------------------chhHHHHHHHHHHHHHHHHHH
Q 008957 459 LSMAISTVSIHIFGDVPSSPLVGVLQDHV---------------------NNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 459 ~~~g~~~~~~~~~g~~~~~~~~g~l~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 508 (547)
...|+.+....+ |.++|+.+++++.+.. |.|+..|++.+++.++..+.+
T Consensus 208 ~~~~i~~~~~~i-G~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 208 LYIGILESIAVF-GPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999766665 8899998888887543 235666777776665544433
No 244
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.46 E-value=2.3e-07 Score=94.87 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=111.1
Q ss_pred hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeee
Q 008957 369 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 448 (547)
Q Consensus 369 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (547)
...++..++..+|.++.|.++||+||| +.++.+.++..++.+.....++.+...++=++.|++.+........+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 445677889999999999999999999 888899998888888888889999999999999999999999999999
Q ss_pred ecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 008957 449 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 508 (547)
Q Consensus 449 ~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (547)
.|.++++.|+.+..+ ....+. +..+++...+++.. +|++.+++.....++..++.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~ 251 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLW 251 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 566777 55667878888877 58888888777766655553
No 245
>PTZ00207 hypothetical protein; Provisional
Probab=98.46 E-value=2.2e-07 Score=93.52 Aligned_cols=153 Identities=16% Similarity=0.116 Sum_probs=94.1
Q ss_pred HHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh----
Q 008957 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---- 420 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 420 (547)
.+.+..+.|.+ ++.++.+..+. .+..+.... ....++.|++.||+|+| +++..+.++..+..++....
T Consensus 43 ~y~fsv~s~~L-~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 43 MYAFNLISGAM-QARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 44555555654 45567775443 222222222 23455689999999999 77777777666666555554
Q ss_pred --hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCC-CccchhhhhhcccchhHHHHHHH
Q 008957 421 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV-PSSPLVGVLQDHVNNWRKTTLAL 497 (547)
Q Consensus 421 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~-~~~~~~g~l~~~~~~~~~~~~~~ 497 (547)
.+.+.+.+..++.+.+.+...+.....+.+.+ |+.||.+.|+.....++ |.+ +++...+++.+ ++...+++.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l 190 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFL 190 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 35566666666666666655555555556654 68899999999888777 655 45545544443 355666666
Q ss_pred HHHHHHHHHHHHH
Q 008957 498 TSIFFLAAGIWFV 510 (547)
Q Consensus 498 ~~~~~~~~~~~~~ 510 (547)
+++.++..++...
T Consensus 191 ~vl~~vv~ll~~~ 203 (591)
T PTZ00207 191 MSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHh
Confidence 6666555444443
No 246
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.44 E-value=5.8e-07 Score=88.45 Aligned_cols=146 Identities=19% Similarity=0.282 Sum_probs=115.7
Q ss_pred ccCchh-hHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHH
Q 008957 361 YHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLV 437 (547)
Q Consensus 361 ~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 437 (547)
+..+.. ...+.+....|.+++.+.+|++.||+|.| +++..+.++..+..++..... +.+..+++=++-|++.
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 444432 33555677899999999999999999999 788777777777776666553 3345566667788888
Q ss_pred hhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 008957 438 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
+..++....+...-.|+++|++..++.....++ |.+++-++.|++-+...+|+..|++.+.+.++..++++...
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999766666 88888779999999844599999999998887777665443
No 247
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.44 E-value=6.2e-06 Score=77.46 Aligned_cols=149 Identities=19% Similarity=0.166 Sum_probs=125.3
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhh-hcCCceehHHHHHHHHHHHHhh---hccccHHHHHHHHHHhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-SHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLVG 181 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~G 181 (547)
|+=.+-||+|..|...++..+..|..++....|++.. |.++|++..+|+....++..+. +...+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 5566779999999999999999999999999999988 6677888888888777776553 45568899999999999
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC----------CCCchhHHHHHHHHHHHHHH
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFAV 251 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f~~~~~~~~~~~~ 251 (547)
++.|.+.....+.+.+...+++.|..+|.+.....++..+|-.+++.+.| ..+|-.+|.+.++..++...
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998887643 23577888888776655555
Q ss_pred HHH
Q 008957 252 LAF 254 (547)
Q Consensus 252 ~~~ 254 (547)
+..
T Consensus 393 ll~ 395 (403)
T PF03209_consen 393 LLG 395 (403)
T ss_pred HHH
Confidence 443
No 248
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.37 E-value=4.6e-06 Score=80.62 Aligned_cols=125 Identities=17% Similarity=0.105 Sum_probs=103.5
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhhhh
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEA 185 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~ 185 (547)
..--+|.++.+..+.......+..++.+++.++++|+|+|+++.++.++..++.++..+.+ +.+.+++..++.++|.+
T Consensus 263 ~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~ 342 (467)
T COG2211 263 VTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTG 342 (467)
T ss_pred EEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhh
Confidence 3344566667777888888889999999999999999999999999999999999888766 78888999999999999
Q ss_pred hhhhcccccccccCCC-------CCcchhhhHHHHhhhhhhhhhhhhHHhhcCC
Q 008957 186 SFISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH 232 (547)
Q Consensus 186 ~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 232 (547)
...+...++++|..+- +.-|...+......=+|..++..+.+++.+.
T Consensus 343 ~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 343 IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888752 3336677777777778888888777776543
No 249
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.35 E-value=1.9e-05 Score=79.58 Aligned_cols=152 Identities=14% Similarity=0.084 Sum_probs=121.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHHHHHHhhhcccc---------------
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD--------------- 169 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~--------------- 169 (547)
..+.++++.+...+.-..+.+.-......+.+++++|-| ||-+++.++.++..+|..+..++..
T Consensus 62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~ 141 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG 141 (571)
T ss_pred HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence 667888888888888888899989999999999999976 8999999999999888765443211
Q ss_pred ----------HHHHHHHHHHhhhhhhhhhhcccccccccCC---CC---CcchhhhHHHHhhhhhhhhhhhhHHhhcCCC
Q 008957 170 ----------FWSIAICRMLVGVGEASFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL 233 (547)
Q Consensus 170 ----------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 233 (547)
...++.+.-+..+|.|+.-|...++-+|-++ ++ .+...+.++....++|..++..+-.+.-+..
T Consensus 142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~ 221 (571)
T KOG1237|consen 142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV 221 (571)
T ss_pred CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 1356667778888999999999999999998 32 2336788999999999999988888888889
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhc
Q 008957 234 NWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 234 gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
+|.+-|.+..+..++..++.+...
T Consensus 222 ~w~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred cceeeccHHHHHHHHHHHHHHcCc
Confidence 999999999877766555544433
No 250
>PRK11462 putative transporter; Provisional
Probab=98.26 E-value=3.1e-06 Score=84.63 Aligned_cols=119 Identities=10% Similarity=0.024 Sum_probs=82.5
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc--cHHHHHHHHHHhhhhhhhhhhccccc
Q 008957 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPF 194 (547)
Q Consensus 117 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 194 (547)
...+.+.+.+.++..++.+++++++||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+...++
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888899999999999999999999987766555444344333322 23344555566788877777766777
Q ss_pred ccccCC-------CCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCc
Q 008957 195 IDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (547)
Q Consensus 195 i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 235 (547)
++|..+ .++-|..++.......+|..+|+.+++.+.+..|+
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777766 33335556777788888999998888876644333
No 251
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.25 E-value=2.1e-07 Score=88.96 Aligned_cols=177 Identities=12% Similarity=0.049 Sum_probs=124.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhccceeEeecc----CchhhH-hhhhhhcccccccceeeeeeeecc-cccchhHHHH
Q 008957 329 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKL 402 (547)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~ 402 (547)
.+.++.+...-+.--+.+|++-..+-.|+....+ .+...+ .+...+....-+..+++||++||+ |+| +.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~t 94 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RT 94 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HH
Confidence 3456666666777777777776666666555544 664333 222333333334567899999995 777 66
Q ss_pred HHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhcCccceeeeecccCC--cchhHHHHHHHHHHHhhcCCCccc
Q 008957 403 LSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSP 478 (547)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~g~~~~~~~~~g~~~~~~ 478 (547)
+..+.++.++.-+.+... .......+.+.+...+.+..=+....++.+.+++ .+|-.+.++.....++ |+.++|.
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl~~p~ 173 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSLIAPI 173 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHHHHHH
Confidence 666666666665555554 3455566666666677788878888888888887 3577788888888888 8999999
Q ss_pred hhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 008957 479 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 479 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
+.+++.+..| |+..|...++-...+.+.+...+
T Consensus 174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999976 88999988888888777776554
No 252
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.21 E-value=8.4e-07 Score=83.45 Aligned_cols=131 Identities=10% Similarity=-0.018 Sum_probs=100.7
Q ss_pred HHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcccc-H-------HHHHHHHHHhhhhhhhhhhcccccccccC
Q 008957 128 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-F-------WSIAICRMLVGVGEASFISLAAPFIDDNA 199 (547)
Q Consensus 128 ~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~-~-------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 199 (547)
.++..|..+..++.|+.|||++.+.|.+++++..+..+...| . ..+.+..++.-+|- ......+-+|.+
T Consensus 359 ~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP---n~ttfivpaE~F 435 (538)
T KOG0252|consen 359 CSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP---NATTFIVPAEIF 435 (538)
T ss_pred HccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC---CceeEEeehhhc
Confidence 334447778888999999999999999999999999988877 1 12222333333332 234556679999
Q ss_pred CCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC-----CCCchhHHHHHHHHHHHHHHHHHhhccCccC
Q 008957 200 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (547)
Q Consensus 200 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (547)
|.+-|+.+-|+..+..-.|.++|...-.++.+ ..+-|++|++.+..+++..+..+++ ||+..
T Consensus 436 ParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~ 502 (538)
T KOG0252|consen 436 PARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKG 502 (538)
T ss_pred hHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecccc
Confidence 99999999999999999999999999889888 7789999999998877665555444 56443
No 253
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.19 E-value=1.3e-05 Score=81.60 Aligned_cols=156 Identities=11% Similarity=-0.043 Sum_probs=105.8
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccH-------------HH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF-------------WS 172 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~-------------~~ 172 (547)
+.+-+..+.+... .+...+..+...++..++.++.||+|||+.++.+...+.++.++.+..... ..
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 6666666766444 566667777777888888999999999999999999999999887743211 11
Q ss_pred HHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHH-
Q 008957 173 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV- 251 (547)
Q Consensus 173 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~- 251 (547)
+...-+..........+....+.+|.+|.+-|+++.++......+...+-......+....++...|...+..+.+..+
T Consensus 398 ~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~ 477 (513)
T KOG0254|consen 398 IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLII 477 (513)
T ss_pred HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 2222222233333345556678899999999999999888777766554433333444333356777777777777766
Q ss_pred HHHhhccCccC
Q 008957 252 LAFVIKPLQLK 262 (547)
Q Consensus 252 ~~~~~~p~~~~ 262 (547)
..+++.||+..
T Consensus 478 fv~~~~pETkg 488 (513)
T KOG0254|consen 478 FVFFFVPETKG 488 (513)
T ss_pred HheEEcccCCC
Confidence 56667788543
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.19 E-value=6.1e-06 Score=67.67 Aligned_cols=109 Identities=9% Similarity=0.111 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccC
Q 008957 120 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 199 (547)
Q Consensus 120 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 199 (547)
-.-.++......+++++.+.+.+++|.|+.+++|.+.+.+-.+.. +-++.+.++.+-.+.|++.+..+++...++.+..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 334667777788888999999999999999999999998655544 4567889999999999999999999999999999
Q ss_pred CCCCcchhhhHHHHhhhhhhhhhhhhHHhh
Q 008957 200 PVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (547)
Q Consensus 200 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 229 (547)
++++|++-.+++-.....+.++|.++...+
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888888887766544
No 255
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.14 E-value=7.2e-06 Score=76.35 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=118.1
Q ss_pred cccccc-cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
+....| .|.+..+.+...+.+..+..+|.+...++..|+...|.+.+..++..+-++..+++++...+ .+-++.|++.
T Consensus 260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~ 338 (422)
T COG0738 260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFN 338 (422)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHh
Confidence 334444 78899999999999999999999999999999999999999999998888889999996554 4567889999
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHH
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 250 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 250 (547)
+..+|...+.-.+..+ +.....+..-.+..+|.++-|.+-|++.+..|-...+.+...+|.+..
T Consensus 339 simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 339 SIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999998 344455556666778889999999999999998888886666665554
No 256
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=1.5e-06 Score=85.88 Aligned_cols=135 Identities=20% Similarity=0.172 Sum_probs=107.5
Q ss_pred hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeee
Q 008957 369 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 448 (547)
Q Consensus 369 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (547)
....++.++.+++.+.++.+.||++-. +.+....++..+..++....++.+.++++-++.|++.+..+|....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 445677899999999999999999955 555555555555555555678899999999999999999999999999
Q ss_pred ecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc-----ccchhHHHHHHHHHHHHHHHHHHH
Q 008957 449 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 449 ~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
..-+.+++|+.-+|+.++..++ |.++|+.+...+.. ..-+|++.|++-+++.++..++.+
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 9999999999999999877776 88888877766532 123599999999988776665544
No 257
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.04 E-value=0.00015 Score=71.60 Aligned_cols=245 Identities=13% Similarity=0.093 Sum_probs=135.7
Q ss_pred CccchhHHHHHHHH-HHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc---------c----------------
Q 008957 115 NNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------F---------------- 168 (547)
Q Consensus 115 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------~---------------- 168 (547)
.+..+..+-....+ ...+......+++++++|.+++-+.+..+.....+.++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34445555443333 555667889999999999998887776666655555542 1
Q ss_pred ------cHHHHHHHHHHhhhhhhhhhh-cccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC---------C
Q 008957 169 ------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------H 232 (547)
Q Consensus 169 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---------~ 232 (547)
+.|.+.+.-+..-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.++++.+..++.+ .
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 122222333333333333333 356778999999999999999999999999998888877776 2
Q ss_pred CCchhHHHHHHHHHHHH---HHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccchhhhhcccccc
Q 008957 233 LNWRYAFWGEAILMLPF---AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGE 309 (547)
Q Consensus 233 ~gwr~~f~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (547)
..|...+.......++. .+.....+.+.... +++..+.. ..+++
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~--~~~~~~~~---------------------------~~~kk---- 262 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVIILLYRYMNKNVLT--DPRFYPSA---------------------------KKKKK---- 262 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--ccccchhh---------------------------hcccc----
Confidence 24654332222111111 11222222211100 00000000 00000
Q ss_pred hhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchh-h---Hhhhhhhcccccccceee
Q 008957 310 SRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-D---MMFGGVTIVCGIVGTISG 385 (547)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~ 385 (547)
.+...+..++.+.++++|.+..+.+...+++...+.+..-.-...++.+..+.. + ..+....++..++..+++
T Consensus 263 ---~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~ 339 (491)
T PF03219_consen 263 ---KKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLS 339 (491)
T ss_pred ---cCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012234457788899999999888888877777666554333333333322211 1 122233344555555777
Q ss_pred eeeeeccccc
Q 008957 386 GFILDQMGAT 395 (547)
Q Consensus 386 g~l~d~~~~~ 395 (547)
+.+.+|+|-+
T Consensus 340 ~~iir~~GW~ 349 (491)
T PF03219_consen 340 SNIIRRFGWR 349 (491)
T ss_pred HHHHHHhhHH
Confidence 7888888877
No 258
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.03 E-value=0.00022 Score=68.58 Aligned_cols=55 Identities=11% Similarity=0.102 Sum_probs=39.8
Q ss_pred HHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcc
Q 008957 431 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 486 (547)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 486 (547)
.+..+.....+...++.-....+|..-|+-+.+.|++.|+ |+-.-..+.=++.|.
T Consensus 413 ~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 413 VLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHHHHHHhhh
Confidence 3444444566667778888888999999999999999999 665444455555553
No 259
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.01 E-value=0.00046 Score=66.28 Aligned_cols=253 Identities=15% Similarity=0.094 Sum_probs=144.2
Q ss_pred cccccccccC---ccchhHHHHHHHH-HHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc---------c----
Q 008957 106 SGIQGDFKLN---NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------F---- 168 (547)
Q Consensus 106 ~~i~~~~~~s---~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------~---- 168 (547)
-.+++.+-++ +..+.++-+..-+ +..+..++.+++++++.|.+++-.-+..+....+++++. +
T Consensus 47 R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 47 RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 3456666543 5556777777777 778899999999999999999888887777777776652 1
Q ss_pred -------------------cHHHHHHHHHHhhhhhhhhhh-cccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHh
Q 008957 169 -------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (547)
Q Consensus 169 -------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 228 (547)
|.|..-+.-++.-+-.+...+ .-.....|.+..+|-.|..++++.+.+++..++..+..+
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 113332333333333333332 345567888888999999999999999999999888888
Q ss_pred hcCCC-C---------chhHHHHHHHHHHHHHHHHHhhccCccCCCCCCCccccccccccccCCcCCCCCcccccccccc
Q 008957 229 VGSHL-N---------WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (547)
Q Consensus 229 l~~~~-g---------wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (547)
+.++. . -+..+.+.++.++++..+..+.-+..........+++..
T Consensus 207 ~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~k------------------------- 261 (509)
T COG3202 207 LSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKK------------------------- 261 (509)
T ss_pred HhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcc-------------------------
Confidence 87632 1 233444444444333333333221111110000000000
Q ss_pred hhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhh-hccceeEeeccCch-hhH---hhhhh
Q 008957 299 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY-WGPKAGYNIYHMSN-ADM---MFGGV 373 (547)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~-~~~---~~~~~ 373 (547)
++++ +...++.++++.+.++|.++.+.+...+++.+.+.+.. |-... +..+.... ... .+...
T Consensus 262 ----k~~~-------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~i-k~~~~~~~~~~~f~~~~~~~ 329 (509)
T COG3202 262 ----KKKK-------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGI-KELYPTTNEYTAFMGRFQIW 329 (509)
T ss_pred ----cccc-------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHhcCChhHHHHHHHHHHHH
Confidence 0000 11123446778889999999988888888877666543 22211 11111111 111 11222
Q ss_pred hccc-ccccceeeeeeeeccccc
Q 008957 374 TIVC-GIVGTISGGFILDQMGAT 395 (547)
Q Consensus 374 ~~~~-~~~~~~~~g~l~d~~~~~ 395 (547)
.++. .++...+++-+.+|.|-.
T Consensus 330 tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 330 TGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHhhhHHHHHHhhHH
Confidence 2333 445566777777877765
No 260
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.95 E-value=0.0004 Score=62.08 Aligned_cols=138 Identities=9% Similarity=-0.094 Sum_probs=95.6
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhccccccccc
Q 008957 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 198 (547)
Q Consensus 119 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 198 (547)
.|.+.-+-.+-..+..+.+..+.||+.--+=+.+..++.+.+..+.+++.+.++=+++-.+..++.|.....-.++-+ .
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-R 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-c
Confidence 456666666677777777888889876555556777888889999999999999888888888888866554433333 2
Q ss_pred CCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC--CCCchhHHHHHHHHHHHHHHHHHhhccCcc
Q 008957 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (547)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (547)
+++ ..++.++.+.+.+.++|..--..+.+ ...-|...++...+-++.+...++.++++.
T Consensus 143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 222 34566666666666676654444544 345788888888777777777777775533
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.92 E-value=0.00048 Score=67.68 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhh
Q 008957 169 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 225 (547)
Q Consensus 169 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 225 (547)
.++..++.-++.|++.+.......++.+ .+|++ .++.+..+.+++.+++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4677778888899999888877777766 55543 4666666666666665544
No 262
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.00011 Score=72.40 Aligned_cols=124 Identities=11% Similarity=0.033 Sum_probs=110.4
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhh-hhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhh
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFA-SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~ 184 (547)
-.+...++++..+.+...+.......+++++.. .+...+|-|+++.+|++...+...+.+++++.|+++....+.++..
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~ 345 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG 345 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc
Confidence 456778999999999998888888888888887 7778889999999999999999999999999999999998887765
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 230 (547)
...|...+.++.+.+++++|+++++.+...++..+++|.+-+.+.
T Consensus 346 -~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 346 -IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred -chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 478889999999999999999999999999999999998776553
No 263
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.77 E-value=2.4e-05 Score=55.62 Aligned_cols=55 Identities=20% Similarity=0.137 Sum_probs=48.3
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHH
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 157 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 157 (547)
|-+|...++.|+++.++|.+.++..+...++++++|.++||+|+++.++....++
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3446677789999999999999999999999999999999999999887776554
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.67 E-value=5.6e-05 Score=73.53 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=87.9
Q ss_pred eehHHHHHHHHHHHHhhhcc---cc------HHHHHHHHHHhhhhhhhhhhcccccccccCCCC---CcchhhhHHHHhh
Q 008957 148 RLIGVGLSVWTFATAGCGSS---FD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 215 (547)
Q Consensus 148 ~~l~~~~~~~~~~~~~~~~a---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 215 (547)
|+++++.+++.+|.++..++ .+ .+.++++-.+.++|.|+.-|...++++|.++++ +|...+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 46788899999999884433 22 367899999999999999999999999999876 3567888999999
Q ss_pred hhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHh
Q 008957 216 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 216 ~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
++|..++..+.+++.+++||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877665554443
No 265
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.51 E-value=0.00013 Score=69.58 Aligned_cols=114 Identities=12% Similarity=0.051 Sum_probs=83.8
Q ss_pred cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHH--HHH---HHhhhccccHHHHHHHHHHhhhhhhh
Q 008957 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW--TFA---TAGCGSSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 112 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~--~~~---~~~~~~a~~~~~l~~~r~l~G~~~~~ 186 (547)
+.-..++..+...+|.+|-.++.--...+ |+ |++.+.+.+-. .+. ....-+.++.|.+++.-+..|+..|.
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 33345677888888888877764432221 33 34333333222 222 22233568999999999999999999
Q ss_pred hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhh
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 229 (547)
.++.....+.|-.++++|..+++....+-++|.+++.+++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887654
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.48 E-value=0.0011 Score=58.42 Aligned_cols=56 Identities=11% Similarity=0.042 Sum_probs=38.7
Q ss_pred CCcchhhhHHHHhhhhhhhhhhhhHHhh---c--CCCCchhHHHHHHHHHHHHHHHHHhhc
Q 008957 202 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 202 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l---~--~~~gwr~~f~~~~~~~~~~~~~~~~~~ 257 (547)
|+|+....+...+.++|.++....--.- . ..-.|++++.+.+++.++-+++..++-
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifG 62 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFG 62 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5688888888888899887754432111 0 112499999999988877766666653
No 267
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.47 E-value=6.4e-05 Score=67.09 Aligned_cols=132 Identities=12% Similarity=0.172 Sum_probs=76.2
Q ss_pred HHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh---
Q 008957 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--- 420 (547)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 420 (547)
..+.+..|.|.+ ++..+.++.+. .+.....++..+| ++.|.+.|++|.+ ..+.++.+.......+....
T Consensus 17 t~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHhC
Confidence 455566666654 45677776555 4444555666664 7889999999998 66666666666655544432
Q ss_pred ----hhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc
Q 008957 421 ----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 485 (547)
Q Consensus 421 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 485 (547)
.+.|......++.+.+.............+.+ |++||++.|+.-...++-+++. ..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GLSaai~-t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGLSAAIF-TQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHhHHHHH-HHHHHHHcC
Confidence 12333333333333333333333333344555 5689999999987777734333 334434433
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.19 E-value=0.0011 Score=64.75 Aligned_cols=136 Identities=12% Similarity=0.091 Sum_probs=72.2
Q ss_pred hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHHHhhcCcc
Q 008957 369 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----S-SLYGFLALFTVGELLVFATQAP 443 (547)
Q Consensus 369 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 443 (547)
...+...++..++.++.|++..|.+.-+ +-++.+.+++.+..++.... + ..+..++.-++.|++.+ ....
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~ 149 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAV 149 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHH
Confidence 3445567888999999999999888521 34444555555554443221 2 23333444444443322 2223
Q ss_pred ceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchh----hhhhc--------ccchhHHHHHHHHHHHHHHHHHHHH
Q 008957 444 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV----GVLQD--------HVNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 444 ~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~----g~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
.-.++.+...++.|.++.+..+... .+|.++||.+. +...+ .++.|..+-++++.+.++..+....
T Consensus 150 lR~Y~a~~s~~~dR~rA~a~~~~~~-vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 150 LRAYIADASTVEDRPRAFAATSGGF-VLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHhccCccchHHHHHHhhhHH-HHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 3444555455577777777764422 23555555433 22221 1234666667776666665555443
No 269
>PRK03612 spermidine synthase; Provisional
Probab=97.18 E-value=0.0027 Score=64.09 Aligned_cols=142 Identities=11% Similarity=-0.085 Sum_probs=86.3
Q ss_pred cccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHH---HHHHhh----hccccH-HHHHHHHHH
Q 008957 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT---FATAGC----GSSFDF-WSIAICRML 179 (547)
Q Consensus 108 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~----~~a~~~-~~l~~~r~l 179 (547)
+.--+|-+..+.+.+.+++.+|.++|+.+++++.++.-++. ..+-+.+.. ++..+. ++...+ ..++..-++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33446777888899999999999999999998874332222 111111111 111111 111111 123344566
Q ss_pred hhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc-CCCCchhHHHHHHHHHHHHHH
Q 008957 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAV 251 (547)
Q Consensus 180 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~ 251 (547)
.|+..|+..|....+..+... ++-|...|-.+....+|.++|.++.+++. ..+|-....++.+.+.+++++
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 788888888877766654332 23567789999999999999999887654 456644444444555444443
No 270
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.08 E-value=0.0069 Score=57.51 Aligned_cols=99 Identities=15% Similarity=0.029 Sum_probs=52.1
Q ss_pred hcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH------HHHHhhhHHHHHHHHHHHHHHHhhcCccceee
Q 008957 374 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL------TAFCLSSLYGFLALFTVGELLVFATQAPVNYV 447 (547)
Q Consensus 374 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (547)
..+...+|.+...++-++-.|.. ......=.+....+. ......+.+..+.+..+.++..+-.....+.+
T Consensus 292 fN~~d~vG~~~a~~~~~~~~r~l----~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~ 367 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWPDPRKL----TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMY 367 (406)
T ss_pred hHHHHHhhhhhhhcccCCCCcee----hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehh
Confidence 56777788777666654433321 111111111111111 11223566667777777777776555566777
Q ss_pred eecccCCcchhHHHHHHHHHHHhhcCCCcc
Q 008957 448 CLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 448 ~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~ 477 (547)
..+.++++++-.+..+.. +.-..|.+.|.
T Consensus 368 aPk~v~~~e~e~aG~~m~-~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 368 APKQVKPSEKEAAGNLMV-FFLVGGLALGS 396 (406)
T ss_pred cCCCCChHHHHHHHHHHH-HHHHHHHHHhh
Confidence 777777766666555553 33332544444
No 271
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.89 E-value=0.00075 Score=69.73 Aligned_cols=128 Identities=14% Similarity=0.077 Sum_probs=81.3
Q ss_pred ccccceeeeeeeec-ccccchhHHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHhhcCccceeee
Q 008957 378 GIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLS--------SLYGFLALFTVGELLVFATQAPVNYVC 448 (547)
Q Consensus 378 ~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (547)
.-+..+++|+++|+ +|++ +.+..+.++..+...++.... .....+..+.+..++.+..-+...+..
T Consensus 36 ~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~ 110 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFG 110 (654)
T ss_pred HHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhh
Confidence 34456678888887 4555 555555555444444333221 112244555666666777777777777
Q ss_pred ecccCCc---chhHHHHHHHHHHHhhcCCCccchhhhhhcccc------hhHHHHHHHHHHHHHHHHHHHHH
Q 008957 449 LHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN------NWRKTTLALTSIFFLAAGIWFVG 511 (547)
Q Consensus 449 ~~~~~~~---~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 511 (547)
.+.+.++ .+.....++....++ |+.+++.+.+++.+..+ +|..+|.+.+++.+++.+++...
T Consensus 111 gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 111 GDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred HhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 7777653 466778888777788 88888888888875431 46677777777777666665543
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.56 E-value=0.0053 Score=60.79 Aligned_cols=121 Identities=12% Similarity=-0.009 Sum_probs=96.1
Q ss_pred cCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhc----------cccHHHHHHHHHHhhhh
Q 008957 114 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRMLVGVG 183 (547)
Q Consensus 114 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------a~~~~~l~~~r~l~G~~ 183 (547)
.++...|.+..+..++..++........-+..-|+++..+.++.++..+.... .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888899998899999999999988888888889888888888776664321 12233334455666666
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 234 (547)
....+-....+++|..|+..-|...+++.+..++|..++..++..+.+.++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 667777788899999999999999999999999999999999988775443
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.37 E-value=0.011 Score=56.55 Aligned_cols=154 Identities=10% Similarity=-0.069 Sum_probs=94.8
Q ss_pred cccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcC-CceehHHHHHHHHHHHHhh-h---ccccHHHHHHHHHHhhhhh
Q 008957 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGC-G---SSFDFWSIAICRMLVGVGE 184 (547)
Q Consensus 110 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~-~---~a~~~~~l~~~r~l~G~~~ 184 (547)
..-|.+....|++.....++..+++...|.+.||.. -|+++++......++.... . .....+.++..-.+.|.+.
T Consensus 294 ~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 294 CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh
Confidence 334555578899999999999999999999999985 4556666666655553222 1 1223455677777888888
Q ss_pred hhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCC---chh-HHHHHHHHHHHHHHHHHhhccCc
Q 008957 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRY-AFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 185 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---wr~-~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
....|...-+-.|..-|..-+.-.|+.....++=.++-..+-+...+..+ |.+ .-+......++.+++..++.|+.
T Consensus 374 ~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 374 TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhH
Confidence 88999998888888544434444555544333322333333344444444 333 33444444455555666666664
Q ss_pred cCC
Q 008957 261 LKG 263 (547)
Q Consensus 261 ~~~ 263 (547)
.+.
T Consensus 454 ~R~ 456 (480)
T KOG2563|consen 454 RRL 456 (480)
T ss_pred HhH
Confidence 443
No 274
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.20 E-value=0.0039 Score=58.01 Aligned_cols=142 Identities=15% Similarity=0.068 Sum_probs=81.1
Q ss_pred eccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 008957 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (547)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (547)
.++.+..+. .+.....+.+.+...+.|.+.||+||| +..+..+++-...|+.- ..++.+..++.=++.|....
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIATS 136 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHHH
Confidence 356664443 233333455666677789999999999 77777777777777543 34566666666667777766
Q ss_pred hcCccceeeeecc-----cCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccch-hHHHHHHHHHHHHHHHHH
Q 008957 439 ATQAPVNYVCLHS-----VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 439 ~~~~~~~~~~~~~-----~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~ 507 (547)
..+...-+++..+ +|++..+...+......+.+-++.+..+..++.+..+. ...+|.....+.+++.++
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 6666554444333 33344454454432122221223344445555554442 356777777666655554
No 275
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.09 E-value=0.00091 Score=67.70 Aligned_cols=57 Identities=7% Similarity=0.067 Sum_probs=0.0
Q ss_pred eeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHH
Q 008957 356 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 417 (547)
Q Consensus 356 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (547)
-.+++++.+.... .+.+..-++.++..++..++.+|..|- +++..+.++.++.+++.
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSLLF 85 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHHHH
Confidence 4666677775444 555666688888877777777764443 45555555555444443
No 276
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.99 E-value=0.17 Score=47.30 Aligned_cols=122 Identities=12% Similarity=0.014 Sum_probs=67.1
Q ss_pred HHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhh------hcc------ccHHHHHHHHHHhh----hhhhhhhhc
Q 008957 127 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC------GSS------FDFWSIAICRMLVG----VGEASFISL 190 (547)
Q Consensus 127 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~------~~a------~~~~~l~~~r~l~G----~~~~~~~~~ 190 (547)
.....+...+.|...|+..|+|++...+++.-++.+++ .+. .+++.+..+-++.- ++.=.....
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG 152 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34456677788999999999999888776543333322 222 24554444333332 222111222
Q ss_pred ccccccccC----CCCCcchhh---hHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHH
Q 008957 191 AAPFIDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 248 (547)
Q Consensus 191 ~~~~i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 248 (547)
...+-.||. ..+.+.... +..-..-..--.+.|++.|.+.+..+-|..-.+.++.+.+
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 222223443 222233322 4444444455678899999998888878766666655555
No 277
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.98 E-value=0.024 Score=54.39 Aligned_cols=123 Identities=12% Similarity=-0.026 Sum_probs=75.6
Q ss_pred cceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhHH
Q 008957 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 460 (547)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 460 (547)
.-+....+.|.++-| ++++...+...+...++.+.++....-+.-++.|.....- ...++++-..+++++--++
T Consensus 57 ~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 57 FLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHHHHHH
Confidence 344556778999998 7887777777777777777777777777777776666532 2233344444677766677
Q ss_pred HHHHHHHHHhhcCCCccchhhhhhcc-cchhHHHHHHHHHHHHHHHHHHHH
Q 008957 461 MAISTVSIHIFGDVPSSPLVGVLQDH-VNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 461 ~g~~~~~~~~~g~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
.+......-. |..++..++..+... ..+|....++......++.++.++
T Consensus 131 ts~~raa~l~-g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 131 TSYTRAATLV-GRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7766544444 666666666555542 234545545555444455554443
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.96 E-value=0.018 Score=56.23 Aligned_cols=119 Identities=16% Similarity=-0.017 Sum_probs=91.1
Q ss_pred cccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh---c---cc----cHHHHHHHHHHhh
Q 008957 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S---SF----DFWSIAICRMLVG 181 (547)
Q Consensus 112 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~---a~----~~~~l~~~r~l~G 181 (547)
-|+++..+|..-+...+....+.+.+.++.+|+|..|.-+++...-..+..++. + .+ +...++.+-.+.=
T Consensus 288 ~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR 367 (432)
T PF06963_consen 288 QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSR 367 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence 399999999999999999999999999999999999888877765444333322 1 12 2334444444444
Q ss_pred hhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc
Q 008957 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (547)
Q Consensus 182 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 230 (547)
+|.=++.....-++.|..|+++||...|.-....++-.++-..++-.+.
T Consensus 368 ~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 368 IGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5665677778889999999999999999999999888877776665444
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.94 E-value=0.049 Score=52.29 Aligned_cols=145 Identities=10% Similarity=-0.014 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhhhccceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHH
Q 008957 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 415 (547)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (547)
....+...++...-..++|.|+++.+-.+..........-+.+.+..++.|..+||...|..+||+.+....+...+..+
T Consensus 38 ~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~ 117 (498)
T KOG0637|consen 38 ASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLF 117 (498)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHh
Confidence 33344445556666778888888765444333333333446667778889999998766666666777666665555555
Q ss_pred HHHHhhh-----------------HHHHHHHHHHHHHHHhhcCccceeeeecccCCcchhH-HHHHHHHHHHhhcCCCcc
Q 008957 416 TAFCLSS-----------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGDVPSS 477 (547)
Q Consensus 416 ~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~g~~~~~~~~~g~~~~~ 477 (547)
+...... ....++.+.+.=+.......+.-++..+...++.+.+ +++.+..+..+ |+.+|-
T Consensus 118 Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-GnvLGY 196 (498)
T KOG0637|consen 118 LIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GNVLGY 196 (498)
T ss_pred hhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cceeee
Confidence 4433211 1112222233333444677788888888877765555 88777655555 777665
Q ss_pred chhh
Q 008957 478 PLVG 481 (547)
Q Consensus 478 ~~~g 481 (547)
.+.+
T Consensus 197 ~~g~ 200 (498)
T KOG0637|consen 197 ALGS 200 (498)
T ss_pred eccc
Confidence 4444
No 280
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.80 E-value=0.077 Score=51.98 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=80.4
Q ss_pred HHHHHHhhhhhhhhhhh---hhcCCceehHHHHHHHHHHHHhhhcc------------------ccHHHHHHHHHHhhhh
Q 008957 125 AFMVGLLVASPIFASLA---KSHNPFRLIGVGLSVWTFATAGCGSS------------------FDFWSIAICRMLVGVG 183 (547)
Q Consensus 125 ~~~~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~a------------------~~~~~l~~~r~l~G~~ 183 (547)
...+|..+++.+.+.+. +++||++++.++.++..++.++.-.. +++...++.-++.|++
T Consensus 287 ~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~ 366 (461)
T KOG3098|consen 287 GIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFG 366 (461)
T ss_pred HHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhH
Confidence 34444555556666666 46899999999999888888776432 3566778888999999
Q ss_pred hhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhh
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 229 (547)
.+......+.++++.+ +++|..+.++...-..++..++.......
T Consensus 367 D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 367 DACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999999 55699999999888888887766655443
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.79 E-value=0.0019 Score=60.77 Aligned_cols=102 Identities=15% Similarity=-0.005 Sum_probs=2.8
Q ss_pred hhhhcccccccceeeeeeeecc-cccchhHHHHHHHH--HHHHHHHHHHH----------HHhhhHHHHHHHHHHHHHHH
Q 008957 371 GGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA--TFLGAISCLTA----------FCLSSLYGFLALFTVGELLV 437 (547)
Q Consensus 371 ~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 437 (547)
..++.++-.+|+.+.++..-+. .+| ++.... =++....+++. ...++.+..+++.++.++..
T Consensus 188 fl~Fn~gD~iGR~l~~~~~~~~~~~~-----~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TN 262 (309)
T PF01733_consen 188 FLLFNLGDFIGRFLASWPRWPGPSPR-----WLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTN 262 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcchhcceeEecccccc-----cHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHcc
Confidence 4567789999999888753211 122 222111 11111111111 12345566667777777777
Q ss_pred hhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccc
Q 008957 438 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 478 (547)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~ 478 (547)
+-..+..+....+.+++++|..+..+....... |-.+|..
T Consensus 263 Gyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs~ 302 (309)
T PF01733_consen 263 GYLSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGSV 302 (309)
T ss_dssp ----HHHH---------------------------------
T ss_pred chhhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 766666777777888887777776666544444 6666553
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.78 E-value=0.072 Score=52.58 Aligned_cols=108 Identities=12% Similarity=0.017 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhcCCc--eehHHHH--HHHHHHHHhhh---------ccccHHHHHHHHHHhhhhhhh
Q 008957 120 GVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGL--SVWTFATAGCG---------SSFDFWSIAICRMLVGVGEAS 186 (547)
Q Consensus 120 g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~--~~~~~~~~~~~---------~a~~~~~l~~~r~l~G~~~~~ 186 (547)
-.....|.+|-.+|..+..+.. .-++| ++.+.+. +++..-.++|. +-++-+..++..++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4556677788888777554331 11233 3332221 22333333333 225667788889999999999
Q ss_pred hhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHh
Q 008957 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (547)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 228 (547)
....+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988877643
No 283
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.59 E-value=0.006 Score=43.38 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHhhhccceeEeeccCchhh-Hhhhhhhcccccccceeeeeeeecccccc
Q 008957 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATI 396 (547)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 396 (547)
-...++.......+.-+.|.|+++ .+.++.. ..+..+..+..+++.++.|.++||.++++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 344666677777888889999987 4555444 45667778899999999999999999983
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.37 E-value=0.098 Score=51.85 Aligned_cols=55 Identities=7% Similarity=-0.045 Sum_probs=37.3
Q ss_pred HHHHHHHHHhhcCc-cceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhh
Q 008957 429 LFTVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (547)
Q Consensus 429 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~ 484 (547)
+....-.......+ .....+.|...+++..+-.++.....++ |.++++.+..++.
T Consensus 134 FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~ 189 (472)
T TIGR00769 134 FYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 33333333334444 3455666666778899999999877777 8888888877776
No 285
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.64 E-value=0.017 Score=47.49 Aligned_cols=101 Identities=7% Similarity=-0.054 Sum_probs=70.8
Q ss_pred hhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCccceeeeecc
Q 008957 372 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 451 (547)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (547)
.+......++.++.+.+.+++|.| +.++++.+.-.+.. .....++.+..+....+.|++.+..+.....++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~-~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYI-ASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 344455566677788889999998 66666555554333 333455667777788888888888888877777777
Q ss_pred cCCcchhHHHHHHHHHHHhhcCCCccch
Q 008957 452 VKPSLRALSMAISTVSIHIFGDVPSSPL 479 (547)
Q Consensus 452 ~~~~~r~~~~g~~~~~~~~~g~~~~~~~ 479 (547)
..++.+++-.++...+.+. +.++|..+
T Consensus 118 s~~~~~~~~~~ifw~i~~~-s~i~G~~~ 144 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQS-SLIFGNLF 144 (156)
T ss_pred CCHHHHhhHHHHHHHHHHH-HHHHHHHH
Confidence 7778888888888766665 55555533
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.55 E-value=0.18 Score=47.14 Aligned_cols=112 Identities=17% Similarity=0.107 Sum_probs=64.5
Q ss_pred hhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHhhcCccceee
Q 008957 370 FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS--LYGFLALFTVGELLVFATQAPVNYV 447 (547)
Q Consensus 370 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (547)
......+...++.++.|.+.||.||| +.+...........++.....+ .+...+.....+.+.+...+.....
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 33444556666668999999999887 3443333222222222222222 3444444444555555566666667
Q ss_pred eecccCC-cchhHHHHHHHHHHHhhcCCCccchhhhhhcc
Q 008957 448 CLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 486 (547)
Q Consensus 448 ~~~~~~~-~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 486 (547)
..+..++ +.|+...+.........|..++|.+.+.+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665 57888888876533333767777666666554
No 287
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.54 E-value=0.18 Score=52.11 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=79.8
Q ss_pred ceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHh-------------
Q 008957 355 KAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------------- 420 (547)
Q Consensus 355 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 420 (547)
.-.++.++.+.... .+....-++..+..++..+...|..|- +++..+.++.++..++..+.
T Consensus 121 ttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-----r~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~ 195 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-----RWIGIGLVLMGLGSLLFALPHFFSGPYEYELEV 195 (735)
T ss_pred hhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-----ceeeechhHHHHHHHHHhChHHhcCcchhhhhh
Confidence 34556666664333 444555577777666666666665554 45544444444444443221
Q ss_pred -----------------------------------hhHHHHHHHHHHHHHHHhhcCcc----ceeeeecccCCcchhHHH
Q 008957 421 -----------------------------------SSLYGFLALFTVGELLVFATQAP----VNYVCLHSVKPSLRALSM 461 (547)
Q Consensus 421 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~r~~~~ 461 (547)
.+.....+++++..+..+..-.+ ..+++-+.+.++..+.-.
T Consensus 196 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYl 275 (735)
T KOG3626|consen 196 IKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYL 275 (735)
T ss_pred hhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHH
Confidence 00111333444444444444444 444455555556677777
Q ss_pred HHHHHHHHhhcCCCccchhhhhhcc------------------cchhHHHHHHHHHHHHHHHHHHHH
Q 008957 462 AISTVSIHIFGDVPSSPLVGVLQDH------------------VNNWRKTTLALTSIFFLAAGIWFV 510 (547)
Q Consensus 462 g~~~~~~~~~g~~~~~~~~g~l~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 510 (547)
|+..+ ..++|-++|-.+++.+... .|.|...|++.+.+.++..+.++.
T Consensus 276 gi~~~-~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 276 GILYS-MAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred HHHHH-HHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 77753 3333655555444444321 255767788888877777766663
No 288
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=91.95 E-value=0.21 Score=48.54 Aligned_cols=86 Identities=15% Similarity=0.055 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHhhcCccceeeeecccCCc---chhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHH
Q 008957 424 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 500 (547)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 500 (547)
....+.+.+..++.++.=+.+.....+.++++ .|.+....+....++ |..+++.+.+++.+..| |...|.+.++.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence 35566667777888888888888888887764 566777778888888 98889999999998866 88889888888
Q ss_pred HHHHHHHHHHH
Q 008957 501 FFLAAGIWFVG 511 (547)
Q Consensus 501 ~~~~~~~~~~~ 511 (547)
.+++.+.++..
T Consensus 112 ~~~~~~~f~~~ 122 (372)
T PF00854_consen 112 MLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 87777766543
No 289
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.99 E-value=1.9 Score=43.21 Aligned_cols=40 Identities=10% Similarity=-0.046 Sum_probs=28.6
Q ss_pred eeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc
Q 008957 445 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 485 (547)
Q Consensus 445 ~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 485 (547)
...+.+....++..+-.++.....++ |.+++..+..++.+
T Consensus 166 W~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 44445555568899999999887777 77777666666665
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.65 E-value=0.069 Score=50.30 Aligned_cols=108 Identities=16% Similarity=0.079 Sum_probs=3.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhh-cCCceehHHHH--HHHHHHHHhh----------hccccHHHHHHHHHHhhhhhhhh
Q 008957 121 VLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGL--SVWTFATAGC----------GSSFDFWSIAICRMLVGVGEASF 187 (547)
Q Consensus 121 ~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~--~~~~~~~~~~----------~~a~~~~~l~~~r~l~G~~~~~~ 187 (547)
.....|.++-.+|....++.-=+ -.+|++.+.+. +++.-..++| .+-+|-+.+++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34667888888888887764211 13444443322 2222222222 12346677888899999999999
Q ss_pred hhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHh
Q 008957 188 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (547)
Q Consensus 188 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 228 (547)
...+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999898888888888877643
No 291
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.53 E-value=0.58 Score=45.94 Aligned_cols=62 Identities=15% Similarity=0.041 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhhhccceeEe---eccCchhhH-hhhhhhc-ccccccceeeeeeeecccccch
Q 008957 336 VLGYIAYNFVIGAYSYWGPKAGYN---IYHMSNADM-MFGGVTI-VCGIVGTISGGFILDQMGATIS 397 (547)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~---~~~~~~~~~-~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~ 397 (547)
.+.+++++...+...--.|.++++ ....+..+. .+...+. +=-+-+.++=....+|+|||+.
T Consensus 6 ~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKS 72 (544)
T PF13000_consen 6 VLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKS 72 (544)
T ss_pred HHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcch
Confidence 344444444443333567777777 222222111 1111111 2223344455666788999974
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.77 E-value=1.2 Score=42.69 Aligned_cols=107 Identities=19% Similarity=0.063 Sum_probs=76.3
Q ss_pred hhHHHHH-HHHHHhhhhhhhhhhhhhcCCceehHHHHH-HHHHHHHh-------hhccccHHHHHHHHHHhhhhhhhhhh
Q 008957 119 DGVLSSA-FMVGLLVASPIFASLAKSHNPFRLIGVGLS-VWTFATAG-------CGSSFDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 119 ~g~~~s~-~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~-~~~~~~~~-------~~~a~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
.-.+..+ |.+.-.+|.+.+.++-++ +||+..+..++ ...+-.+. ..+-.+-+.+++.-.+.|+..|=...
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 3444556 888888887777766665 34544443332 11222222 13346778889999999999999999
Q ss_pred cccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhH
Q 008957 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 226 (547)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 226 (547)
....+..+-.+++++..+-.+.......|...|..++
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999998888888888888888777765
No 293
>PRK03612 spermidine synthase; Provisional
Probab=89.31 E-value=0.98 Score=45.89 Aligned_cols=58 Identities=9% Similarity=-0.054 Sum_probs=30.3
Q ss_pred HHHHHHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhc-ccch
Q 008957 430 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVNN 489 (547)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~~~~ 489 (547)
.++.+++.+...|...-+.... ..+..+...|-.+....+ |+++|+++.+++.- ..|.
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~-~~~~~g~~~g~ly~~ntl-Ga~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRI-RDQHLGHNVATVLAADYL-GALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-cccchhhhhhhhHhHHhH-HHHHHHHHHHHHHHHhcch
Confidence 3344555666655444333321 122234555555444444 88888888777653 4553
No 294
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.35 E-value=4 Score=36.68 Aligned_cols=139 Identities=14% Similarity=0.039 Sum_probs=87.8
Q ss_pred chhHHHHHHHHHHhhhhhhhhhhhhhcCCc--eehHHHHHHHHHHHHhhh----cccc---HHHHHHHHHHhhhhhhhhh
Q 008957 118 QDGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCG----SSFD---FWSIAICRMLVGVGEASFI 188 (547)
Q Consensus 118 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~----~a~~---~~~l~~~r~l~G~~~~~~~ 188 (547)
-.|.+.+.+++...+|+-+..++..|-..| ..+.+..++.++...+.. .+++ ...=+++-.+.-.+.|..+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 359999999999999999999998876555 344444444443333222 2221 2222444455566788899
Q ss_pred hcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
|....+=+.+.|+++|...+.++..-.++=..++-..--.-....+-|..|-++.+...+..+....+
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L 430 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRL 430 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999988888765554322221110000112356788888887777665555443
No 295
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=88.20 E-value=0.24 Score=35.66 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=49.6
Q ss_pred HHHHhhhccceeEeeccCch-hhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 008957 346 IGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 424 (547)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (547)
-+.+.-.+|...++ .+.+. ....+.+.+.++..+|.+...++.++..++ ..+..+.+......+.....++.+
T Consensus 8 RFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 8 RFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred HHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhchH
Confidence 34445566765555 55664 444777888899999999998887775555 566666666666666666655554
Q ss_pred HH
Q 008957 425 GF 426 (547)
Q Consensus 425 ~~ 426 (547)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 43
No 296
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.58 E-value=0.18 Score=45.84 Aligned_cols=120 Identities=9% Similarity=0.046 Sum_probs=81.3
Q ss_pred cccccC-ccchhHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhh
Q 008957 110 GDFKLN-NFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 187 (547)
Q Consensus 110 ~~~~~s-~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~ 187 (547)
+.+..+ +.|.-|....|.+|-.+..--.-..--++ ---.++-.-.+++.+...+..+.+++|..++.-+.-|+-.|..
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGas 359 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGAS 359 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchH
Confidence 344443 34688888888887655432211111010 0001112223444455556678899999999999999988889
Q ss_pred hhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhh
Q 008957 188 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (547)
Q Consensus 188 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 229 (547)
++...--+.+-.++++|-.+++....+-.+|..++.+++-.+
T Consensus 360 YVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 360 YVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 988888888888899999999999999999988887776443
No 297
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=87.15 E-value=1.3 Score=40.98 Aligned_cols=75 Identities=7% Similarity=0.112 Sum_probs=57.5
Q ss_pred HHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCCC
Q 008957 126 FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 201 (547)
Q Consensus 126 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 201 (547)
..+..+.++++.+.+..++|.|+++.++...+...-. .=+-+.+..++-.-...|++.+..+..--+++++.-..
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 3444556666667899999999999998888765432 22346778888899999999999999888888877543
No 298
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=84.42 E-value=0.029 Score=49.21 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=30.4
Q ss_pred hHhhcccchhHHHHHHHHHHHHHHHHHhhhccceeEeeccCch
Q 008957 323 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 365 (547)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 365 (547)
+...|++-.+....+.+.+.-...+.-..|+|.|..+..+.+.
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~q 236 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQ 236 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHH
Confidence 4455666667777776776666677777888988888777664
No 299
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=81.59 E-value=31 Score=33.63 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=15.3
Q ss_pred hhhhHhhcccchhHHHHHHHHHHH
Q 008957 320 SQDTKVLLQEKVYVVNVLGYIAYN 343 (547)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~ 343 (547)
....+..+++|..+...++.....
T Consensus 235 ~~~~~~~~~nP~~~a~~lgli~~~ 258 (385)
T PF03547_consen 235 KKSILKLFKNPPLIAIILGLIIGL 258 (385)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHH
Confidence 345566778888877666554443
No 300
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=80.26 E-value=3.9 Score=38.91 Aligned_cols=64 Identities=14% Similarity=0.056 Sum_probs=31.3
Q ss_pred chhHHHHHHHHHHHHHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeee-----cccccch
Q 008957 330 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD-----QMGATIS 397 (547)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~ 397 (547)
+.+..+.+.+..+........ ..|.+++. .+.+.... .+....+- .---++...++| |+|||+.
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccc
Confidence 344444444555555444444 78888874 33332222 22211110 112345566677 9999863
No 301
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=76.12 E-value=15 Score=33.05 Aligned_cols=101 Identities=11% Similarity=0.053 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhh-hcCCceehH----HHHHHHHHHHHhhh-cc----ccHHHHHHHHHHhhhhhhhhhh
Q 008957 120 GVLSSAFMVGLLVASPIFASLAK-SHNPFRLIG----VGLSVWTFATAGCG-SS----FDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 120 g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~----~~~~~~~~~~~~~~-~a----~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
....-++..|..+|.+..|+... .+.||+.+. .+++++.+..+... +. .++..+++.-|+.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44455666777777787787776 445666544 33444555444421 22 1466788899999987655555
Q ss_pred cccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
+... +..-++..++-+.--.++..+++|.++
T Consensus 224 ViL~-lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILN-LPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhc-ChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 4433 333333333444444555556666554
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=73.96 E-value=18 Score=31.75 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=26.5
Q ss_pred ccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHH
Q 008957 197 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 243 (547)
Q Consensus 197 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 243 (547)
|+...+++.+.-.......-++..+|..+++++.+..+. +..++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~ 198 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGF-WALLLPA 198 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHH
Confidence 443344443444555566666777777788777777665 3333333
No 303
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=72.67 E-value=14 Score=34.81 Aligned_cols=109 Identities=16% Similarity=0.050 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhcCCce--ehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccc
Q 008957 120 GVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 197 (547)
Q Consensus 120 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 197 (547)
|.+-.+..+..+++.+..|++--++.|.. .+.++.+..+...++++.+++.|..+++-++.+.-.....+.+..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 66777788888899999999988777663 4444555555555667778888887777777766666677778888888
Q ss_pred cCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC
Q 008957 198 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 231 (547)
Q Consensus 198 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 231 (547)
....+.-|..+|+.... +.++=.++....++
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 88888889888887653 33344444444444
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.05 E-value=10 Score=28.41 Aligned_cols=39 Identities=5% Similarity=-0.118 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhc-CCceehHHHHHHHH
Q 008957 120 GVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWT 158 (547)
Q Consensus 120 g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~ 158 (547)
..-.+.-+++..+.....||+.||| |-++..++..++.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3444555666666667779999997 55555444444433
No 305
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=71.79 E-value=59 Score=31.74 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=21.5
Q ss_pred hhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHH
Q 008957 373 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 414 (547)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 414 (547)
+..+.+-+.+.++|-+-.|.|.|+..+ .+++.+.++....+
T Consensus 335 vYAlTs~i~GY~~gs~Y~r~gG~~Wik-~m~lta~Lfp~~~~ 375 (593)
T KOG1277|consen 335 VYALTSPINGYVSGSFYARLGGRRWIK-NMLLTASLFPVPVF 375 (593)
T ss_pred HHHhcccccccccceeeehhccHHHHH-HHHHHhhhhhHHHH
Confidence 344556666667777777777653221 33344444443333
No 306
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=68.96 E-value=20 Score=33.78 Aligned_cols=85 Identities=12% Similarity=0.053 Sum_probs=57.4
Q ss_pred ccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHH----Hhh-hc----cccHHHHHHHHHHhhhh
Q 008957 113 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT----AGC-GS----SFDFWSIAICRMLVGVG 183 (547)
Q Consensus 113 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~----~~~-~~----a~~~~~l~~~r~l~G~~ 183 (547)
|-.--|.+.+.+.|...+.+|+...-++.|.--.-+.+..-.++..++. ++. .| .++-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4456788999999999999999998888875322222222222222211 111 22 34667788899999999
Q ss_pred hhhhhhcccccccc
Q 008957 184 EASFISLAAPFIDD 197 (547)
Q Consensus 184 ~~~~~~~~~~~i~~ 197 (547)
.|...|....++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999988888766
No 307
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=67.93 E-value=1.4e+02 Score=30.00 Aligned_cols=78 Identities=9% Similarity=-0.031 Sum_probs=39.5
Q ss_pred HHHHHHHhhcCccceeeeecccCC-cchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHH
Q 008957 431 TVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 509 (547)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (547)
...+.+....-...-.-+.+.+|. +.++.-+|-.+...+.+..++.-..++-+....| |...-.+.-++.++..++++
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~litg~lFF 370 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444445555555 4566666666555555333444445566666544 65555554444444444333
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=62.36 E-value=7.5 Score=40.02 Aligned_cols=163 Identities=12% Similarity=-0.022 Sum_probs=84.4
Q ss_pred HHHHHHhhhccceeEeeccCchhhH-hhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhh-
Q 008957 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS- 421 (547)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 421 (547)
..++++...+-.|+.+..+.....+ -.............+++++++|-+--|. +.+.++.++......++....
T Consensus 51 ~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt~~a~ 126 (571)
T KOG1237|consen 51 LAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLTLSAM 126 (571)
T ss_pred HhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 3343333334444545444443222 2223334445556678889999764442 455444444444332222110
Q ss_pred ---------------------hH---HHHHHHHHHHHHHHhhcCccceeeeecccC---C-c--chhHHHHHHHHHHHhh
Q 008957 422 ---------------------SL---YGFLALFTVGELLVFATQAPVNYVCLHSVK---P-S--LRALSMAISTVSIHIF 471 (547)
Q Consensus 422 ---------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~r~~~~g~~~~~~~~~ 471 (547)
+. ..+...+.+...+.++.-+.....-.+.++ + + ....-........+.
T Consensus 127 ~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~- 205 (571)
T KOG1237|consen 127 IPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNG- 205 (571)
T ss_pred hhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHH-
Confidence 00 111222222223444555666666677666 3 2 222455555555555
Q ss_pred cCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 008957 472 GDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 512 (547)
Q Consensus 472 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (547)
|..++-.+.-++.+.. +|...|-+..++..++.++++...
T Consensus 206 g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 206 GALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred HHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHHHcCc
Confidence 6666666666776664 488888888888777777666544
No 309
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=60.31 E-value=17 Score=30.07 Aligned_cols=15 Identities=20% Similarity=0.122 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHH
Q 008957 492 KTTLALTSIFFLAAG 506 (547)
Q Consensus 492 ~~~~~~~~~~~~~~~ 506 (547)
-.++++.++..+.++
T Consensus 96 R~~~Vl~g~s~l~i~ 110 (163)
T PF06679_consen 96 RALYVLVGLSALAIL 110 (163)
T ss_pred hhHHHHHHHHHHHHH
Confidence 445555554444333
No 310
>COG4769 Predicted membrane protein [Function unknown]
Probab=59.62 E-value=15 Score=30.03 Aligned_cols=52 Identities=17% Similarity=0.200 Sum_probs=38.7
Q ss_pred HHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 125 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 125 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
.+....++.+...-++..++|+|..-.+|.-.+ .++.+|..++.+.+++.|-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhc
Confidence 445555666777778889999999866665443 4677899999999998764
No 311
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=58.95 E-value=80 Score=29.71 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=15.9
Q ss_pred cHHHHHHHHHHhhhhhhhhhhcc-cccccccCCCC
Q 008957 169 DFWSIAICRMLVGVGEASFISLA-APFIDDNAPVP 202 (547)
Q Consensus 169 ~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~ 202 (547)
+...-.+--.+.+++.|...-++ .-++.|....+
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444555566666666543222 22344444433
No 312
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=54.39 E-value=52 Score=21.68 Aligned_cols=44 Identities=23% Similarity=0.255 Sum_probs=29.7
Q ss_pred HhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhh
Q 008957 213 MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 213 ~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 256 (547)
.+.-+|.++|.+.+......++++....+..+.+++..++....
T Consensus 9 Ws~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i 52 (57)
T PF11151_consen 9 WSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVI 52 (57)
T ss_pred HHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHc
Confidence 34556777777777776667777777777766666666555543
No 313
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.91 E-value=25 Score=26.37 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=20.9
Q ss_pred cchhHHHHHHHHHHHhhcCCCccchhhhhhcccc
Q 008957 455 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 455 ~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~ 488 (547)
+.++.+.++-.. ...+++++-....||+.|++-
T Consensus 38 s~k~~~~a~kls-sefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 38 SIKGYAQAFKLS-SEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 566677766643 333355555568899998764
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.10 E-value=36 Score=25.63 Aligned_cols=52 Identities=19% Similarity=0.070 Sum_probs=43.8
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc
Q 008957 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 168 (547)
Q Consensus 117 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 168 (547)
+..|-+..+|.-.+.+.++.+++..|+.-+.+.=.+|..+..+|..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5568899999999999999999999999888888888888887777665543
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=48.35 E-value=41 Score=37.92 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=10.6
Q ss_pred hhhhhhhhhHHhhcCCCCch
Q 008957 217 TGVALGYVYGGVVGSHLNWR 236 (547)
Q Consensus 217 ~G~~~g~~l~~~l~~~~gwr 236 (547)
.|.++|.+++.++...+|.-
T Consensus 142 gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHH
Confidence 45555655555555544443
No 316
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=47.28 E-value=18 Score=32.14 Aligned_cols=21 Identities=5% Similarity=0.047 Sum_probs=11.8
Q ss_pred hhcccchhHHHHHHHHHHHHH
Q 008957 325 VLLQEKVYVVNVLGYIAYNFV 345 (547)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~ 345 (547)
..+..|.++......|+.-++
T Consensus 202 t~ffspifikaFsltF~aEwG 222 (294)
T KOG2881|consen 202 TLFFSPIFIKAFSLTFLAEWG 222 (294)
T ss_pred HHhccHHHHHHHHHHHHHHhc
Confidence 344567777666555555444
No 317
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=45.47 E-value=67 Score=30.90 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=18.9
Q ss_pred cCCCccchhhhhhcccchhHHHHHHHHHHHH
Q 008957 472 GDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 502 (547)
Q Consensus 472 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 502 (547)
...+.|.+.|.+....+ .+....++++...
T Consensus 187 tn~Lapv~tg~Iitfvs-l~~~~g~f~~w~~ 216 (503)
T KOG2601|consen 187 TNLLAPVITGLIITFVS-LRASAGTFAAWAL 216 (503)
T ss_pred hhchhhhhhcccceeec-hhhhhhhhHHHHH
Confidence 66788999998887643 4444444444433
No 318
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=45.34 E-value=54 Score=29.62 Aligned_cols=6 Identities=0% Similarity=0.180 Sum_probs=2.6
Q ss_pred eccccc
Q 008957 390 DQMGAT 395 (547)
Q Consensus 390 d~~~~~ 395 (547)
+|+...
T Consensus 20 K~~~~g 25 (254)
T PF07857_consen 20 KKFDTG 25 (254)
T ss_pred EeccCC
Confidence 444443
No 319
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=45.04 E-value=28 Score=27.20 Aligned_cols=10 Identities=0% Similarity=-0.157 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q 008957 493 TTLALTSIFF 502 (547)
Q Consensus 493 ~~~~~~~~~~ 502 (547)
..+++++++.
T Consensus 67 ~~Ii~gv~aG 76 (122)
T PF01102_consen 67 IGIIFGVMAG 76 (122)
T ss_dssp HHHHHHHHHH
T ss_pred eehhHHHHHH
Confidence 3334443333
No 320
>COG2119 Predicted membrane protein [Function unknown]
Probab=43.79 E-value=85 Score=26.55 Aligned_cols=78 Identities=10% Similarity=0.027 Sum_probs=48.5
Q ss_pred HHHHHHHH-HHHHhhcccccccccccCCccccCCCCccccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhc
Q 008957 66 LLVIFCVI-NMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (547)
Q Consensus 66 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~ 144 (547)
++...++. +....-|++-++. -.+..+++......-=......+...++-+.+.++++|+
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiAT-------------------IaLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki 161 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIAT-------------------IALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKL 161 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHH-------------------HHHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccC
Confidence 44444444 4445567777664 335666665433222223345566677788888899999
Q ss_pred CCceehHHHHHHHHHHHH
Q 008957 145 NPFRLIGVGLSVWTFATA 162 (547)
Q Consensus 145 Grr~~l~~~~~~~~~~~~ 162 (547)
..|++-.++.+++.+..+
T Consensus 162 ~~r~l~~~aallFl~fal 179 (190)
T COG2119 162 PERLLRFIAALLFLIFAL 179 (190)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999988887777665543
No 321
>PRK02237 hypothetical protein; Provisional
Probab=43.50 E-value=58 Score=24.64 Aligned_cols=52 Identities=13% Similarity=0.008 Sum_probs=43.1
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccc
Q 008957 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 168 (547)
Q Consensus 117 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 168 (547)
+..|-+..+|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+++
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3478899999999999999999999999888877888888877776655543
No 322
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=39.85 E-value=10 Score=33.07 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=65.1
Q ss_pred ccccccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHhhh
Q 008957 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (547)
Q Consensus 103 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (547)
|.+..+.+.||+++.+--=+.+.|.+|..+|.++.+.++.- +..+ +.-.=...-.-.|+
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~-------------------~a~~--~~fhP~ALAMasGv 183 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASL-------------------LASL--GIFHPYALAMASGV 183 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHH-------------------HHhc--cCCCHHHHHHHcCC
Confidence 45566788888888877777777888877777776654321 1111 11112234445789
Q ss_pred hhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhH
Q 008957 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 226 (547)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 226 (547)
|+|....++..-+.+.+|. ......++-...+-+..+.|-.+.
T Consensus 184 GSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 184 GSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred cHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975 355556665555555555554443
No 323
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=38.58 E-value=79 Score=31.06 Aligned_cols=29 Identities=7% Similarity=-0.087 Sum_probs=22.0
Q ss_pred CcchhhhHHHHhhhhhhhhhhhhHHhhcC
Q 008957 203 QKTAWLSMFYMCIPTGVALGYVYGGVVGS 231 (547)
Q Consensus 203 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 231 (547)
+|.+...+.....-++..+-|+++.+.-.
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 58888888888878888888887665544
No 324
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=37.87 E-value=1.2e+02 Score=28.12 Aligned_cols=40 Identities=13% Similarity=0.005 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHhhhc-cccHHHHHHHHHHhhhhhhhhhh
Q 008957 150 IGVGLSVWTFATAGCGS-SFDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 150 l~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
++.+++++++++++..+ .++.|.+.+.-++.+++.++...
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~~ 42 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLGV 42 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 34555566555555554 44555666666666766665443
No 325
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=37.76 E-value=1e+02 Score=31.57 Aligned_cols=24 Identities=4% Similarity=0.115 Sum_probs=15.2
Q ss_pred hhhcccccccceeeeeeeeccccc
Q 008957 372 GVTIVCGIVGTISGGFILDQMGAT 395 (547)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~ 395 (547)
.+..+.+.+++.+++++...++.+
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCC
Confidence 344566667777777776666655
No 326
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=37.63 E-value=89 Score=26.63 Aligned_cols=26 Identities=15% Similarity=0.413 Sum_probs=21.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCce
Q 008957 123 SSAFMVGLLVASPIFASLAKSHNPFR 148 (547)
Q Consensus 123 ~s~~~~~~~~~~~~~g~l~dr~Grr~ 148 (547)
..-|.+++.+...+.|++.||..+|+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~~ 113 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKRN 113 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhccc
Confidence 45788999999999999999988533
No 327
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=36.08 E-value=67 Score=26.30 Aligned_cols=51 Identities=8% Similarity=0.059 Sum_probs=34.8
Q ss_pred ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhh
Q 008957 168 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (547)
Q Consensus 168 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (547)
+++..++..-.+.|+|. ..+.|.+++--+++++-|..+|+-.+-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 44455555555555443 3356777778888888999999988888876553
No 328
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=35.72 E-value=2.3e+02 Score=26.27 Aligned_cols=57 Identities=11% Similarity=0.141 Sum_probs=34.5
Q ss_pred HHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhc
Q 008957 173 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (547)
Q Consensus 173 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 230 (547)
--..|.+.|+-.= .+..++++++-.||++++--..--...+.+++.++-+++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568888887664 44558899999999654433333334444444455555554443
No 329
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=35.49 E-value=46 Score=25.31 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=24.3
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHhhccCc
Q 008957 230 GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (547)
Q Consensus 230 ~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (547)
.+..+|+.+|++...++++++.+.+.+.|++
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3456899999998888888877777777763
No 330
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=35.32 E-value=77 Score=29.37 Aligned_cols=126 Identities=8% Similarity=-0.054 Sum_probs=58.2
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhh---cCCceehHHHHHHHHHHHHhhhcc---------------
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS---HNPFRLIGVGLSVWTFATAGCGSS--------------- 167 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~Grr~~l~~~~~~~~~~~~~~~~a--------------- 167 (547)
.-+.+.++.-....++..+...... +.+-.++ ||.||.=+++.+..++..+..++.
T Consensus 49 aLLADa~Hml~D~~al~lal~A~~~------a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s~~I~~EAi~R~~~P~~i 122 (296)
T COG1230 49 ALLADALHMLSDALALLLALIAIKL------ARRPATKRFTFGYKRLEILAAFLNALLLIVVSLLILWEAIQRLLAPPPI 122 (296)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHH------hcCCCCCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4466667765555555544433322 2222332 677776666665555544443321
Q ss_pred ccHHHHHHHHHHhhhhhhhhhhcccccccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHH
Q 008957 168 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 243 (547)
Q Consensus 168 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 243 (547)
++..++ .-.+.|+..-. . +.-++.+- ..+.....-++.....-.-.-+|.++++.+....||.|.=-+.+
T Consensus 123 ~~~~ml--~va~~GL~vN~--~-~a~ll~~~-~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~Dpi~s 192 (296)
T COG1230 123 HYSGML--VVAIIGLVVNL--V-SALLLHKG-HEENLNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWLDPILS 192 (296)
T ss_pred CccchH--HHHHHHHHHHH--H-HHHHhhCC-CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchHHH
Confidence 122222 22233332221 1 11222222 22234444455544333333456667777777778888544443
No 331
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.92 E-value=39 Score=27.64 Aligned_cols=32 Identities=6% Similarity=-0.112 Sum_probs=21.6
Q ss_pred hcCccceeeeecccCCcchhHHHHHHHHHHHh
Q 008957 439 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (547)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (547)
+.....|.+++..-+++..|...|+-..-.|.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 34444566677777888888888887655554
No 332
>COG3619 Predicted membrane protein [Function unknown]
Probab=34.87 E-value=3.3e+02 Score=24.22 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=16.9
Q ss_pred cchhHHHHHHHHHHhhhhhhhhhhhhhcCC
Q 008957 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNP 146 (547)
Q Consensus 117 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr 146 (547)
...........+...+|......+..|..|
T Consensus 55 ~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 55 AALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344555666667777775555544444444
No 333
>PRK10263 DNA translocase FtsK; Provisional
Probab=34.14 E-value=2.2e+02 Score=32.54 Aligned_cols=17 Identities=35% Similarity=0.331 Sum_probs=9.3
Q ss_pred cCCCccchhhhhhcccc
Q 008957 472 GDVPSSPLVGVLQDHVN 488 (547)
Q Consensus 472 g~~~~~~~~g~l~~~~~ 488 (547)
|+++|..+...+...+|
T Consensus 143 GGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 55555555555555544
No 334
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=33.37 E-value=5e+02 Score=25.91 Aligned_cols=61 Identities=11% Similarity=0.186 Sum_probs=32.0
Q ss_pred ccccCCCCCcchhhhHHHHhhhhhhhhhhhhHHhhcC-CCCchhHHHHHHHHHHHHHHHHHh
Q 008957 195 IDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 195 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~ 255 (547)
..|..|+++|--.........+.-..++....|.+.. ..++++..+...+-.++..+...+
T Consensus 10 ~~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~ 71 (442)
T COG1457 10 SIEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAY 71 (442)
T ss_pred CCCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777544455555544444444444444332 256776666554444444444433
No 335
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=32.99 E-value=1.3e+02 Score=19.47 Aligned_cols=36 Identities=3% Similarity=-0.110 Sum_probs=21.0
Q ss_pred HHHHHHHhhhhhhhhhhhhh-cCCceehHHHHHHHHH
Q 008957 124 SAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTF 159 (547)
Q Consensus 124 s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~ 159 (547)
.....+..+.....|+..|+ +|.++...+..++.++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 34455556666677887775 5765655544444443
No 336
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=32.38 E-value=82 Score=25.76 Aligned_cols=40 Identities=15% Similarity=0.142 Sum_probs=27.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHH
Q 008957 123 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA 162 (547)
Q Consensus 123 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 162 (547)
..-|.+|+.+...+.|++.+|..+++......+...++.+
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 98 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLL 98 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 4478899999999999999998887533333333333333
No 337
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=32.08 E-value=21 Score=34.85 Aligned_cols=8 Identities=25% Similarity=0.721 Sum_probs=3.4
Q ss_pred eeeeeecc
Q 008957 385 GGFILDQM 392 (547)
Q Consensus 385 ~g~l~d~~ 392 (547)
.|++..|.
T Consensus 15 ~G~~~~~~ 22 (385)
T PF03547_consen 15 LGYLLGRF 22 (385)
T ss_pred HHHHHHHh
Confidence 34444443
No 338
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=30.56 E-value=1.3e+02 Score=32.05 Aligned_cols=53 Identities=13% Similarity=0.076 Sum_probs=34.6
Q ss_pred hhhhhhh----cCCceehHHHHHHHHHHHHhhhcc-ccHHHHHHHHHHhhhhhhhhhh
Q 008957 137 FASLAKS----HNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 137 ~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~~~~~~~~ 189 (547)
++-++|. -||.+-++++.+++.++++...+. +..|.+..+-++.+++.++...
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga 100 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGA 100 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 3556663 356677888888888888777655 4455666666666666665443
No 339
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=30.45 E-value=1.1e+02 Score=21.57 Aligned_cols=49 Identities=10% Similarity=0.220 Sum_probs=25.4
Q ss_pred hHHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 209 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 209 ~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
-+.+....++.+++-++| ++.+. .+..+++.++-.+ +..+...|+++..
T Consensus 11 ~l~~~il~~~~iisfi~G-y~~q~--~~~~~~~~~~g~~---~~~lv~vP~Wp~y 59 (76)
T PF06645_consen 11 KLMQYILIISAIISFIVG-YITQS--FSYTFYIYGAGVV---LTLLVVVPPWPFY 59 (76)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHH---HHHhheeCCcHhh
Confidence 344555555556555444 44332 5666666654333 3333445777765
No 340
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=29.75 E-value=6e+02 Score=25.67 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 008957 238 AFWGEAILMLPFAVLAFVI 256 (547)
Q Consensus 238 ~f~~~~~~~~~~~~~~~~~ 256 (547)
.|.+..++.+..+++-++.
T Consensus 4 ~~~il~iiiv~~~ilt~~i 22 (465)
T PF03606_consen 4 TFVILFIIIVFAAILTWII 22 (465)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 3444444444444444443
No 341
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=28.74 E-value=1.6e+02 Score=18.60 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=17.9
Q ss_pred hhhhhhhhHHhhcCCCCchhHHHHHHHHHHHHHHHHH
Q 008957 218 GVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (547)
Q Consensus 218 G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 254 (547)
|..+|..+.+.+....++.+.-++.++.+.+..+..+
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 3444444444333333445555566666555554444
No 342
>PTZ00370 STEVOR; Provisional
Probab=27.79 E-value=1.5e+02 Score=27.05 Aligned_cols=14 Identities=0% Similarity=0.204 Sum_probs=6.6
Q ss_pred hhhhhhhHhhcccc
Q 008957 317 SQFSQDTKVLLQEK 330 (547)
Q Consensus 317 ~~~~~~~~~~~~~~ 330 (547)
++..+.+.++|.+.
T Consensus 109 Kel~e~~ee~fg~~ 122 (296)
T PTZ00370 109 KELLETYEEMFGDE 122 (296)
T ss_pred HHHHHHHHHHhcCc
Confidence 34444455555443
No 343
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=27.72 E-value=1.2e+02 Score=23.76 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=9.2
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 008957 489 NWRKTTLALTSIFFLAAGI 507 (547)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~ 507 (547)
.|.+..+.++++.++..++
T Consensus 34 pWNysiL~Ls~vvlvi~~~ 52 (125)
T PF15048_consen 34 PWNYSILALSFVVLVISFF 52 (125)
T ss_pred CcchHHHHHHHHHHHHHHH
Confidence 3555555555544443333
No 344
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=27.63 E-value=2.5e+02 Score=30.31 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=23.0
Q ss_pred HHHHhhhhhhhhhhhhHHhhcCCCCchhHHHHHHHHHH
Q 008957 210 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 247 (547)
Q Consensus 210 ~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 247 (547)
+...+..++.++..+++.++...++|...+++.++++-
T Consensus 105 Ll~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILAP 142 (810)
T TIGR00844 105 LLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACITA 142 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcC
Confidence 33444455555555555556455778888877776653
No 345
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=27.29 E-value=1.1e+02 Score=29.95 Aligned_cols=272 Identities=10% Similarity=-0.035 Sum_probs=0.0
Q ss_pred CcchhhhHHHHhhhhhhhhhhhhHHhhcCCCCchhHHH---------HHHHHHHHHHHHHHhhccCccCCCCCCCccccc
Q 008957 203 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFW---------GEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 273 (547)
Q Consensus 203 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~---------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 273 (547)
||.+.....-...-...++-|+++.+.=+. ||-...- +...-+...+...+.+-|+..+..++.+..+.
T Consensus 123 eR~~~~~~~v~~~~~~~~vY~~~ahW~W~~-GwL~~lG~~DfAG~~vVH~~gG~~aL~~a~~LgpR~gr~~~~~~~~~~- 200 (404)
T TIGR03644 123 ERMKLWPFLLFAVVLTGFIYPIEGSWTWGG-GWLDDLGFSDFAGSGIVHMAGAAAALAGVLLLGPRKGKYGKNGEVNPI- 200 (404)
T ss_pred hcccHHHHHHHHHHHHHHHHhhhhhheeCc-hHHhhcCchhhcCceEEecchHHHHHHHHheeccCCCCCccCCCcCCC-
Q ss_pred cccccccCCcCCCCCcccccccccchhhhhcccccchhhhhhhhhhhhhhHhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 008957 274 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 353 (547)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (547)
+.......++..++..+...+++.-.
T Consensus 201 ------------------------------------------------------~~~n~~~~~lG~~iLw~gW~gFN~gs 226 (404)
T TIGR03644 201 ------------------------------------------------------PGSNLPLATLGTFILWMGWFGFNGGS 226 (404)
T ss_pred ------------------------------------------------------CCCCHHHHHHHHHHHHHHHHhhcchh
Q ss_pred cceeEeeccCchhhHhhhhhhcccccccceeeeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 008957 354 PKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 433 (547)
Q Consensus 354 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (547)
..-........ ......+....+..+..+...+.++.-.+ +.-.....-+.+..+..........-....++.
T Consensus 227 ~l~~~~~~~~~--~~~~a~~NT~la~a~g~l~~~~~~~~~~g-----k~~~~~~~nG~LAGLVaITa~~~~v~p~~A~ii 299 (404)
T TIGR03644 227 QLALSDVADAN--AVARIFANTNAAAAGGAIAALLLTKLLFG-----KADLTMVLNGALAGLVAITAEPLTPSPLAATLI 299 (404)
T ss_pred hhhcccccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCHHHHHHHHHhhhhhhccccCCCCHHHHHHH
Q ss_pred HHHHhhcCccceeeeecccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 008957 434 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIF 513 (547)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (547)
+...+........+. +...-+..--+.++. ....+.|.+..+++.+. .+..-+......+.+-..+...++..+.+.
T Consensus 300 G~iag~v~~~~~~~~-~~~~iDD~~~~~~vH-g~~Gi~G~i~~glf~~~-~~l~~Ql~g~~~~~~~~~~~s~~~~~il~~ 376 (404)
T TIGR03644 300 GAVGGVIVVFSIVLL-DKLKIDDPVGAISVH-GVAGIWGTLVVPITNGD-ASFGAQLIGAATIFAWVFVTSLIVWFILKA 376 (404)
T ss_pred HHHHHHHHHHHHHHH-HhCCCCCCcCchHhh-hHHHHHHHHHHHHhccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q ss_pred hcccccccchhhhhhccccccccCCcc
Q 008957 514 LKSIDKFNEDGENQISLDSKANMKPLL 540 (547)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (547)
....+.+.|++++-.+..+..++.-.+
T Consensus 377 ~~~lRv~~e~E~~GlD~~~hg~~ay~e 403 (404)
T TIGR03644 377 TMGIRVSEEEEYEGLDIAECGMEAYPE 403 (404)
T ss_pred cccccCCHHHHHcCCCHHHhCcccCCC
No 346
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=27.07 E-value=2e+02 Score=30.78 Aligned_cols=55 Identities=18% Similarity=0.159 Sum_probs=36.1
Q ss_pred hhhhhhhhhc----CCceehHHHHHHHHHHHHhhhcccc-HHHHHHHHHHhhhhhhhhhh
Q 008957 135 PIFASLAKSH----NPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEASFIS 189 (547)
Q Consensus 135 ~~~g~l~dr~----Grr~~l~~~~~~~~~~~~~~~~a~~-~~~l~~~r~l~G~~~~~~~~ 189 (547)
.+++-+.|.= ||.+-++++.++++++++...+... .|.+...-++.+++.++...
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 3344566533 5577888899999888888776544 45556666666776665444
No 347
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=26.87 E-value=1.6e+02 Score=24.12 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=35.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhccccHHHHHHHHHHh
Q 008957 123 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 180 (547)
Q Consensus 123 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 180 (547)
.-.+.++..+.+...-.+..|+.||+.=.++.-+. .++++|..|+.++.++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi~------Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGISIA------GAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 35677788888888888999998877655554332 35567777776666553
No 348
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.22 E-value=2e+02 Score=21.62 Aligned_cols=49 Identities=12% Similarity=0.219 Sum_probs=0.0
Q ss_pred hhhHHHHhhhhhhhhhhhhHHhhcCCCC----chhHHHHHHHHHHHHHHHHHh
Q 008957 207 WLSMFYMCIPTGVALGYVYGGVVGSHLN----WRYAFWGEAILMLPFAVLAFV 255 (547)
Q Consensus 207 ~~~~~~~~~~~G~~~g~~l~~~l~~~~g----wr~~f~~~~~~~~~~~~~~~~ 255 (547)
.+|.......+..++|..+|-++-.+++ |-.+|++.|+...+..+..+.
T Consensus 44 ~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi 96 (100)
T TIGR02230 44 MFGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWV 96 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHH
No 349
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=25.82 E-value=3.9e+02 Score=29.55 Aligned_cols=55 Identities=7% Similarity=-0.069 Sum_probs=27.6
Q ss_pred cccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHH
Q 008957 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA 162 (547)
Q Consensus 106 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 162 (547)
..+...+|++....|+..-+. |..+.-++....+-|-|.-.+-+...+..-+..+
T Consensus 957 t~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMAVan~iGSNIFnI 1011 (1096)
T TIGR00927 957 HQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDI 1011 (1096)
T ss_pred HHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCcceeeeccccchhee
Confidence 445556666666555543333 5555555555555555554444433333333333
No 350
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.55 E-value=3e+02 Score=25.37 Aligned_cols=34 Identities=12% Similarity=-0.016 Sum_probs=20.5
Q ss_pred hhhHhhcccchhHHHHHHHHHHHHHHHHHhhhcc
Q 008957 321 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 354 (547)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 354 (547)
+..+++.++|+.+..................|.|
T Consensus 60 ~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 60 RELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 3455577888777666655555555555555554
No 351
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.32 E-value=52 Score=26.18 Aligned_cols=22 Identities=14% Similarity=0.377 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc
Q 008957 236 RYAFWGEAILMLPFAVLAFVIK 257 (547)
Q Consensus 236 r~~f~~~~~~~~~~~~~~~~~~ 257 (547)
||++++..++.++++++.+++.
T Consensus 1 RW~l~~iii~~i~l~~~~~~~~ 22 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFYCH 22 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHHHH
Confidence 6777766655555555444443
No 352
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=24.00 E-value=1.7e+02 Score=27.98 Aligned_cols=24 Identities=13% Similarity=-0.040 Sum_probs=13.5
Q ss_pred hhhcCCceehHHHHHHHHHHHHhhhc
Q 008957 141 AKSHNPFRLIGVGLSVWTFATAGCGS 166 (547)
Q Consensus 141 ~dr~Grr~~l~~~~~~~~~~~~~~~~ 166 (547)
.||+.-.|++.. ++...|.++...
T Consensus 208 ~e~ft~sKllav--~~si~GViiVt~ 231 (416)
T KOG2765|consen 208 VERFTLSKLLAV--FVSIAGVIIVTM 231 (416)
T ss_pred cchhhHHHHHHH--HHhhccEEEEEe
Confidence 899988885443 333334444333
No 353
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=23.98 E-value=7.4e+02 Score=24.82 Aligned_cols=102 Identities=9% Similarity=-0.153 Sum_probs=68.9
Q ss_pred ccccccccCccchhHHHHHHHHHHhhhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhhcc---ccHHHHHHHHHHhhhh
Q 008957 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVG 183 (547)
Q Consensus 107 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G~~ 183 (547)
.+..++|++.++...+.++-.+...++.++--....++|-|-....+.-...++-+..... ......+.+-+..|+.
T Consensus 39 ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~ 118 (451)
T COG2233 39 LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLV 118 (451)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 3567899999999999999999999999987664444665665555555555555444433 2366666677777766
Q ss_pred hhhhhhcccccccccCCCCCcchhh
Q 008957 184 EASFISLAAPFIDDNAPVPQKTAWL 208 (547)
Q Consensus 184 ~~~~~~~~~~~i~~~~~~~~r~~~~ 208 (547)
.-...+.....+...+||---|..+
T Consensus 119 ~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 119 YFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHHHHHHHHHHHHHhCCCceEEeEe
Confidence 6544443333778888887555433
No 354
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=23.78 E-value=5.1e+02 Score=25.05 Aligned_cols=36 Identities=17% Similarity=0.368 Sum_probs=21.2
Q ss_pred cccCCCCCcchhhhHHHHh-hhhhhhhhhhhHHhhcCCCCch
Q 008957 196 DDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGVVGSHLNWR 236 (547)
Q Consensus 196 ~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~l~~~l~~~~gwr 236 (547)
.|+.|.+ |-..++..... .+.|.++||.++ ..+||-
T Consensus 47 vDYvP~~-~~vlfghhf~sIAGaGPI~GPi~a----a~~Gwl 83 (376)
T PF02554_consen 47 VDYVPTN-KWVLFGHHFASIAGAGPIVGPILA----AQFGWL 83 (376)
T ss_pred CCCCCCc-hHHhhHHHHHHHhccccchHHHHH----HHhcch
Confidence 4666665 55666655443 445666666655 456786
No 355
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=23.03 E-value=1.8e+02 Score=22.26 Aligned_cols=48 Identities=8% Similarity=-0.007 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhhhccccHHHHHHHHHHhhhhhhhhhhcccccccccCC
Q 008957 153 GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 200 (547)
Q Consensus 153 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 200 (547)
..++..+|+++.++......---.|.+.+.|..+..+.-.++..|...
T Consensus 32 Tl~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 32 TLIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 445666777666543221100112333344444445556666666665
No 356
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=22.61 E-value=7.4e+02 Score=26.66 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=25.2
Q ss_pred eeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 008957 386 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (547)
Q Consensus 386 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (547)
+-+.|.=++.+.+.+.+++......+.....-...+..+.+...+.+..+++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 44566655554433344433333333344444445555655555555444443
No 357
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=22.54 E-value=1.7e+02 Score=21.33 Aligned_cols=42 Identities=14% Similarity=0.052 Sum_probs=29.2
Q ss_pred HHHhhhhhhhhhhhhhcCC-------ceehHHHHHHHHHHHHhhhcccc
Q 008957 128 VGLLVASPIFASLAKSHNP-------FRLIGVGLSVWTFATAGCGSSFD 169 (547)
Q Consensus 128 ~~~~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~a~~ 169 (547)
.+.....+.++++.+|.-+ ++.+.++.++...+.++++...|
T Consensus 29 a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 29 AGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3444556666777776654 67888888888888888776554
No 358
>PF03408 Foamy_virus_ENV: Foamy virus envelope protein ; InterPro: IPR005070 Expression of the envelope (Env) glycoprotein is essential for viral particle egress. This feature is unique to the Spumavirinae, a subclass of the Retroviridae. ; GO: 0019031 viral envelope
Probab=22.32 E-value=1.8e+02 Score=30.80 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=31.8
Q ss_pred ccCCcchhHHHHHHHHHHHhhcCCCccchhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 008957 451 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKSIDK 519 (547)
Q Consensus 451 ~~~~~~r~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (547)
.+-|.......++.++..+..|++ +|...+..| |..+.++..++.++.++++=+..+++.++|
T Consensus 917 DvWPaaA~~~~~iGnfL~~ta~gi-----FGtafs~Lg-Y~KPiliGi~ii~liili~kIisWlp~krk 979 (981)
T PF03408_consen 917 DVWPAAASFLSGIGNFLSGTAGGI-----FGTAFSILG-YAKPILIGIVIILLIILIFKIISWLPNKRK 979 (981)
T ss_pred hhhHHHHHHHHHHHHHhhhccccc-----cchHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 334443444444444444443333 333334444 666666666665555555555556666443
No 359
>PRK13712 conjugal transfer protein TrbA; Provisional
Probab=21.78 E-value=60 Score=23.34 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=30.4
Q ss_pred hhhhhhhhhhhhcCCceehHHHHHHHHHHHHhhh--ccccHHHHHHHHHHhh
Q 008957 132 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--SSFDFWSIAICRMLVG 181 (547)
Q Consensus 132 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~a~~~~~l~~~r~l~G 181 (547)
+..+++|+.-..-..|++++++.+.+.+-.+.+- +..|+|.++-+-.=||
T Consensus 16 i~~iiagyffs~~ndr~mfllsslvflvini~~l~vl~~sl~flcgaimnq~ 67 (115)
T PRK13712 16 IFVIIAGYFFSERNDRKMFLLSSLVFLVINIACLYVLTASLWFLCGAIMNQG 67 (115)
T ss_pred EEEEEeeEEeecCCCccEEEhHhHHHHHHhHhhheeecHHHHHHHHHHHcCC
Confidence 4455667666555667777777777777776654 4456665554443333
No 360
>PRK10720 uracil transporter; Provisional
Probab=21.37 E-value=4.2e+02 Score=26.36 Aligned_cols=28 Identities=18% Similarity=-0.156 Sum_probs=12.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccCccCC
Q 008957 236 RYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (547)
Q Consensus 236 r~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (547)
+..+......+.+.+++.-+++|..+++
T Consensus 384 ~~~~~~gi~~g~~~ai~Lnlll~~~~~~ 411 (428)
T PRK10720 384 GAAELKGMALATIVGIGLSLIFKLISKL 411 (428)
T ss_pred HHHhcCcHHHHHHHHHHHHHHhcccccc
Confidence 3333333334445555555555554443
No 361
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=21.25 E-value=1.8e+02 Score=21.63 Aligned_cols=8 Identities=25% Similarity=0.202 Sum_probs=3.3
Q ss_pred HHHHHHHH
Q 008957 493 TTLALTSI 500 (547)
Q Consensus 493 ~~~~~~~~ 500 (547)
.|++++++
T Consensus 5 ~~llL~l~ 12 (95)
T PF07172_consen 5 AFLLLGLL 12 (95)
T ss_pred HHHHHHHH
Confidence 34444433
No 362
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=20.49 E-value=8.4e+02 Score=26.27 Aligned_cols=54 Identities=13% Similarity=0.050 Sum_probs=25.7
Q ss_pred eeeeeecccccchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 008957 385 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (547)
Q Consensus 385 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (547)
++-+.|.=++.+.+.+.+++...+..+.....-...+..+.+...+.+..++.+
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 344556655544333344444444444444444444555555555554444443
No 363
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.31 E-value=2.6e+02 Score=25.43 Aligned_cols=18 Identities=6% Similarity=-0.278 Sum_probs=7.7
Q ss_pred HHHHHHHhhhccceeEee
Q 008957 343 NFVIGAYSYWGPKAGYNI 360 (547)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~ 360 (547)
....++..+.=..|.++.
T Consensus 191 aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 191 AGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHhcccchHHHHHhC
Confidence 334444444333455443
No 364
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.08 E-value=91 Score=22.76 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=13.7
Q ss_pred cCCCccchhhhhhcccchhHHHHHHHHHHHH
Q 008957 472 GDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 502 (547)
Q Consensus 472 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 502 (547)
++++| .+.|+..+.++ + ..+.+.+.+.+
T Consensus 35 ~aiVg-~i~Gf~~Qqls-~-tvy~vg~~~v~ 62 (101)
T KOG4112|consen 35 GAIVG-FIYGFAQQQLS-V-TVYIVGAGFVF 62 (101)
T ss_pred HHHHH-HHHHHHHHHHH-H-HHHHHHHHHHH
Confidence 44443 36677776554 3 33444444433
No 365
>PRK10692 hypothetical protein; Provisional
Probab=20.01 E-value=1.9e+02 Score=20.86 Aligned_cols=18 Identities=6% Similarity=-0.167 Sum_probs=10.3
Q ss_pred CceehHHHHHHHHHHHHh
Q 008957 146 PFRLIGVGLSVWTFATAG 163 (547)
Q Consensus 146 rr~~l~~~~~~~~~~~~~ 163 (547)
||...++|.+++++|.++
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 555566666666555543
Done!