Query 008963
Match_columns 547
No_of_seqs 287 out of 661
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 15:42:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5o_A Bifunctional protein fo 72.0 8.2 0.00028 39.0 7.5 89 367-465 161-255 (286)
2 3czx_A Putative N-acetylmuramo 71.3 5.1 0.00017 37.4 5.5 47 386-432 36-84 (182)
3 3ngx_A Bifunctional protein fo 70.0 8.9 0.00031 38.5 7.2 73 366-446 149-222 (276)
4 3l07_A Bifunctional protein fo 66.9 12 0.00041 37.8 7.4 71 366-446 160-233 (285)
5 3p2o_A Bifunctional protein fo 66.8 11 0.00039 37.9 7.2 71 366-446 159-232 (285)
6 1a4i_A Methylenetetrahydrofola 65.6 13 0.00044 37.8 7.4 73 366-446 164-237 (301)
7 4a26_A Putative C-1-tetrahydro 64.1 12 0.0004 38.1 6.7 73 366-446 164-239 (300)
8 3tnl_A Shikimate dehydrogenase 62.5 42 0.0014 33.9 10.6 94 368-469 179-282 (315)
9 1b0a_A Protein (fold bifunctio 59.5 17 0.00057 36.8 6.8 73 366-446 158-231 (288)
10 3t4e_A Quinate/shikimate dehyd 54.9 62 0.0021 32.6 10.3 94 368-469 173-276 (312)
11 1jwq_A N-acetylmuramoyl-L-alan 53.7 16 0.00056 33.9 5.4 47 386-432 36-86 (179)
12 4b4u_A Bifunctional protein fo 50.8 35 0.0012 34.7 7.6 71 367-445 179-250 (303)
13 3qay_A Endolysin; amidase A/B 50.2 23 0.00078 32.9 5.7 44 387-430 38-89 (180)
14 3ne8_A N-acetylmuramoyl-L-alan 47.0 23 0.00078 34.4 5.4 46 387-432 39-88 (234)
15 3gvx_A Glycerate dehydrogenase 46.2 81 0.0028 31.4 9.5 132 386-544 136-286 (290)
16 1edz_A 5,10-methylenetetrahydr 44.7 26 0.00089 35.8 5.6 76 366-445 176-274 (320)
17 2c2x_A Methylenetetrahydrofola 44.6 37 0.0013 34.1 6.6 73 366-446 157-232 (281)
18 2amj_A Modulator of drug activ 43.7 36 0.0012 31.7 6.1 39 386-424 38-76 (204)
19 3don_A Shikimate dehydrogenase 38.5 59 0.002 32.1 7.0 91 369-469 119-229 (277)
20 3rpe_A MDAB, modulator of drug 38.3 36 0.0012 32.6 5.2 39 386-424 51-89 (218)
21 1xov_A PLY protein, plypsa; al 38.1 20 0.00068 36.7 3.5 43 387-429 46-94 (326)
22 3fbt_A Chorismate mutase and s 36.1 39 0.0013 33.6 5.2 88 368-469 123-233 (282)
23 3fni_A Putative diflavin flavo 35.7 39 0.0013 30.2 4.7 55 366-423 5-61 (159)
24 2q62_A ARSH; alpha/beta, flavo 33.2 94 0.0032 30.1 7.4 57 366-424 33-104 (247)
25 2egg_A AROE, shikimate 5-dehyd 29.8 1.2E+02 0.0042 29.8 7.7 56 411-470 197-260 (297)
26 3l4e_A Uncharacterized peptida 29.4 1.3E+02 0.0043 28.3 7.4 65 367-432 27-93 (206)
27 2f9f_A First mannosyl transfer 29.3 1.7E+02 0.006 25.4 8.0 38 363-402 19-57 (177)
28 2fzv_A Putative arsenical resi 28.8 1.4E+02 0.0049 29.6 7.9 58 365-424 56-129 (279)
29 1nw9_B Caspase 9, apoptosis-re 28.0 41 0.0014 33.2 3.8 34 383-416 47-80 (277)
30 1mkz_A Molybdenum cofactor bio 28.0 1E+02 0.0036 28.0 6.3 68 365-432 8-83 (172)
31 2gt1_A Lipopolysaccharide hept 27.9 1.7E+02 0.0059 28.2 8.4 81 366-448 177-281 (326)
32 3hly_A Flavodoxin-like domain; 27.1 73 0.0025 28.3 5.0 52 369-423 4-56 (161)
33 3tov_A Glycosyl transferase fa 26.3 3.3E+02 0.011 27.0 10.4 81 366-448 184-289 (349)
34 1psw_A ADP-heptose LPS heptosy 26.1 2.8E+02 0.0097 26.7 9.6 82 366-449 179-290 (348)
35 3u7q_A Nitrogenase molybdenum- 25.6 1.3E+02 0.0043 32.3 7.3 98 365-467 218-318 (492)
36 2yxb_A Coenzyme B12-dependent 25.5 1.5E+02 0.0051 26.6 6.8 59 365-425 16-75 (161)
37 3jyo_A Quinate/shikimate dehyd 24.2 1.9E+02 0.0065 28.4 7.9 87 369-469 153-248 (283)
38 3s40_A Diacylglycerol kinase; 23.9 3.6E+02 0.012 26.3 9.9 67 384-450 28-99 (304)
39 2pjk_A 178AA long hypothetical 23.8 1.3E+02 0.0045 27.6 6.2 69 364-432 12-95 (178)
40 1i1q_B Anthranilate synthase c 23.7 68 0.0023 29.2 4.2 52 368-425 1-55 (192)
41 2zuv_A Lacto-N-biose phosphory 23.1 27 0.00094 39.4 1.5 115 367-494 438-591 (759)
42 2dko_A Caspase-3; low barrier 23.0 76 0.0026 28.5 4.3 55 383-439 42-104 (146)
43 3pzy_A MOG; ssgcid, seattle st 23.0 56 0.0019 29.7 3.5 67 365-432 5-80 (164)
44 3evt_A Phosphoglycerate dehydr 22.8 5.5E+02 0.019 25.6 11.2 132 386-539 151-301 (324)
45 1qtn_A Caspase-8; apoptosis, d 22.4 94 0.0032 28.4 4.8 55 383-439 56-118 (164)
46 2eez_A Alanine dehydrogenase; 21.6 2E+02 0.007 29.0 7.7 94 378-477 13-120 (369)
47 2j32_A Caspase-3; Pro-caspase3 21.2 85 0.0029 30.5 4.5 55 383-439 42-104 (250)
48 2ql9_A Caspase-7; cysteine pro 21.0 71 0.0024 29.7 3.7 55 383-439 70-132 (173)
49 2fi0_A Conserved domain protei 20.9 62 0.0021 26.0 2.9 21 379-399 58-78 (81)
50 3rfq_A Pterin-4-alpha-carbinol 20.7 93 0.0032 29.1 4.5 71 363-433 26-104 (185)
51 3aek_B Light-independent proto 20.7 55 0.0019 35.4 3.3 101 366-469 152-257 (525)
52 4dio_A NAD(P) transhydrogenase 20.6 1.3E+02 0.0045 31.6 6.1 35 412-446 269-312 (405)
53 3pwz_A Shikimate dehydrogenase 20.3 2.7E+02 0.0094 27.1 8.1 48 417-468 180-233 (272)
54 2f62_A Nucleoside 2-deoxyribos 20.0 1.3E+02 0.0046 27.3 5.3 40 384-425 29-74 (161)
No 1
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=72.00 E-value=8.2 Score=39.02 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=61.0
Q ss_pred CCEEEEEecCCC--ccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEEE
Q 008963 367 KPKLVILSRNGS--RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVFI 443 (547)
Q Consensus 367 rprlliIsR~~s--R~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~vI 443 (547)
.-++++|.|.+. | -+..+|...|..|.+..- .+.++.+ .+++|||+|+.-|+. +...=|++||++||
T Consensus 161 Gk~vvVvGrs~iVG~------plA~lL~~~gAtVtv~hs-~T~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVI 230 (286)
T 4a5o_A 161 GMDAVVVGASNIVGR------PMALELLLGGCTVTVTHR-FTRDLAD---HVSRADLVVVAAGKPGLVKGEWIKEGAIVI 230 (286)
T ss_dssp TCEEEEECTTSTTHH------HHHHHHHHTTCEEEEECT-TCSCHHH---HHHTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred CCEEEEECCCchhHH------HHHHHHHHCCCeEEEEeC-CCcCHHH---HhccCCEEEECCCCCCCCCHHHcCCCeEEE
Confidence 457889998863 3 366777888999998863 3456654 578999999998875 66666789999999
Q ss_pred EEecCCC---CccccchHHHHHhhc
Q 008963 444 QVIPLGT---DWAAETYYGEPARKL 465 (547)
Q Consensus 444 EI~P~g~---~~~~~~~Y~~lA~~~ 465 (547)
-+--.-. .......|.......
T Consensus 231 Dvgi~~~~~gkl~GDVdf~~v~~~a 255 (286)
T 4a5o_A 231 DVGINRQADGRLVGDVEYEVAAQRA 255 (286)
T ss_dssp ECCSCSSCCCCSSCSBCHHHHHHHC
T ss_pred EecccccccCCcccCccHHHHHhhc
Confidence 9842210 112345566655443
No 2
>3czx_A Putative N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI, MCSG, protein structure initiative; 1.60A {Neisseria meningitidis MC58}
Probab=71.27 E-value=5.1 Score=37.43 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=37.4
Q ss_pred HHHHHHHHc-CCEEEEEec-CCCCCHHHHHHHHhcCCeEEeechhhhhh
Q 008963 386 SLVKMAEDI-GFQVQVVRP-DRTSELAKIYRALNSSDVMVGVHGAAMTH 432 (547)
Q Consensus 386 Evv~~lk~~-GfeV~v~e~-~~~~s~~eQi~l~~~aDVlVGvHGAGLTN 432 (547)
+|.+.|++. |++|+.... +...++.+-+++.+.||++|++|--+..|
T Consensus 36 ~l~~~L~~~~G~~V~~tR~~d~~~~L~~R~~~an~adlfISIH~Na~~~ 84 (182)
T 3czx_A 36 IVASILRNDYGLTVKTDGTGKGNMPLRDAVKLIRGSDVAIEFHTNAAAN 84 (182)
T ss_dssp HHHHHHHHHHCCCEEESCSSCCCCCHHHHHHHHHTCSEEEEECCBCCSS
T ss_pred HHHHHHhhcCCcEEEEecCCCccCCHHHHHHHhhCCCEEEEeccCCCCC
Confidence 355667777 999987654 35579999999999999999999776554
No 3
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=70.04 E-value=8.9 Score=38.54 Aligned_cols=73 Identities=23% Similarity=0.339 Sum_probs=53.7
Q ss_pred CCCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEEEE
Q 008963 366 KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVFIQ 444 (547)
Q Consensus 366 ~rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~vIE 444 (547)
..-++++|.|.+. + -.-+..+|.+.|..|.+..- .+.++.+ .+++|||+|+.=|+. +...=|++||++||-
T Consensus 149 ~Gk~vvVvG~s~i---V-G~plA~lL~~~gAtVtv~~~-~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVID 220 (276)
T 3ngx_A 149 HENTVTIVNRSPV---V-GRPLSMMLLNRNYTVSVCHS-KTKDIGS---MTRSSKIVVVAVGRPGFLNREMVTPGSVVID 220 (276)
T ss_dssp CSCEEEEECCCTT---T-HHHHHHHHHHTTCEEEEECT-TCSCHHH---HHHHSSEEEECSSCTTCBCGGGCCTTCEEEE
T ss_pred CCCEEEEEcCChH---H-HHHHHHHHHHCCCeEEEEeC-CcccHHH---hhccCCEEEECCCCCccccHhhccCCcEEEE
Confidence 3457889998763 0 01366777888999998863 3556654 588999999998874 656667899999998
Q ss_pred Ee
Q 008963 445 VI 446 (547)
Q Consensus 445 I~ 446 (547)
+-
T Consensus 221 vg 222 (276)
T 3ngx_A 221 VG 222 (276)
T ss_dssp CC
T ss_pred ec
Confidence 73
No 4
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=66.92 E-value=12 Score=37.79 Aligned_cols=71 Identities=15% Similarity=0.225 Sum_probs=52.8
Q ss_pred CCCEEEEEecCCC--ccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEE
Q 008963 366 KKPKLVILSRNGS--RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVF 442 (547)
Q Consensus 366 ~rprlliIsR~~s--R~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~v 442 (547)
..-++++|.|.+. | -+..+|...|..|.+..- .+.++. +.+++|||+|+.=|+. +-..=|++||++|
T Consensus 160 ~Gk~vvVIG~s~iVG~------p~A~lL~~~gAtVtv~hs-~t~~L~---~~~~~ADIVI~Avg~p~~I~~~~vk~GavV 229 (285)
T 3l07_A 160 EGAYAVVVGASNVVGK------PVSQLLLNAKATVTTCHR-FTTDLK---SHTTKADILIVAVGKPNFITADMVKEGAVV 229 (285)
T ss_dssp TTCEEEEECCCTTTHH------HHHHHHHHTTCEEEEECT-TCSSHH---HHHTTCSEEEECCCCTTCBCGGGSCTTCEE
T ss_pred CCCEEEEECCCchhHH------HHHHHHHHCCCeEEEEeC-CchhHH---HhcccCCEEEECCCCCCCCCHHHcCCCcEE
Confidence 3456888988763 3 366778888999988753 345565 4589999999988865 5555577999999
Q ss_pred EEEe
Q 008963 443 IQVI 446 (547)
Q Consensus 443 IEI~ 446 (547)
|-+-
T Consensus 230 IDvg 233 (285)
T 3l07_A 230 IDVG 233 (285)
T ss_dssp EECC
T ss_pred EEec
Confidence 9883
No 5
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=66.81 E-value=11 Score=37.92 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=53.5
Q ss_pred CCCEEEEEecCCC--ccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEE
Q 008963 366 KKPKLVILSRNGS--RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVF 442 (547)
Q Consensus 366 ~rprlliIsR~~s--R~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~v 442 (547)
..-++++|.|.+. | -+..+|...|..|.+..- .+.++. +.+++|||+|+.=|+. +...=|++||++|
T Consensus 159 ~Gk~vvVvGrs~iVG~------p~A~lL~~~gAtVtv~h~-~t~~L~---~~~~~ADIVI~Avg~p~~I~~~~vk~GavV 228 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGR------PMATMLLNAGATVSVCHI-KTKDLS---LYTRQADLIIVAAGCVNLLRSDMVKEGVIV 228 (285)
T ss_dssp TTCEEEEECCCTTTHH------HHHHHHHHTTCEEEEECT-TCSCHH---HHHTTCSEEEECSSCTTCBCGGGSCTTEEE
T ss_pred CCCEEEEECCCchHHH------HHHHHHHHCCCeEEEEeC-CchhHH---HHhhcCCEEEECCCCCCcCCHHHcCCCeEE
Confidence 3457889998873 3 366778888999998863 344555 4589999999988865 6566678999999
Q ss_pred EEEe
Q 008963 443 IQVI 446 (547)
Q Consensus 443 IEI~ 446 (547)
|-+-
T Consensus 229 IDVg 232 (285)
T 3p2o_A 229 VDVG 232 (285)
T ss_dssp EECC
T ss_pred EEec
Confidence 9883
No 6
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=65.57 E-value=13 Score=37.82 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=52.6
Q ss_pred CCCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEEEE
Q 008963 366 KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVFIQ 444 (547)
Q Consensus 366 ~rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~vIE 444 (547)
..-++++|.|.+. +.. -+...|...|..|.+..- .+.++. +.+++|||+|+.-|.. +...=|++||++||-
T Consensus 164 ~gk~vvVIG~s~i---VG~-p~A~lL~~~gAtVtv~hs-~t~~L~---~~~~~ADIVI~Avg~p~~I~~~~vk~GavVID 235 (301)
T 1a4i_A 164 AGRHAVVVGRSKI---VGA-PMHDLLLWNNATVTTCHS-KTAHLD---EEVNKGDILVVATGQPEMVKGEWIKPGAIVID 235 (301)
T ss_dssp TTCEEEEECCCTT---THH-HHHHHHHHTTCEEEEECT-TCSSHH---HHHTTCSEEEECCCCTTCBCGGGSCTTCEEEE
T ss_pred CCCEEEEECCCch---HHH-HHHHHHHhCCCeEEEEEC-CcccHH---HHhccCCEEEECCCCcccCCHHHcCCCcEEEE
Confidence 3557899988753 111 266777788999998852 334454 5689999999998875 555557799999998
Q ss_pred Ee
Q 008963 445 VI 446 (547)
Q Consensus 445 I~ 446 (547)
+-
T Consensus 236 Vg 237 (301)
T 1a4i_A 236 CG 237 (301)
T ss_dssp CC
T ss_pred cc
Confidence 74
No 7
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=64.12 E-value=12 Score=38.12 Aligned_cols=73 Identities=18% Similarity=0.273 Sum_probs=52.8
Q ss_pred CCCEEEEEecCCC--ccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEE
Q 008963 366 KKPKLVILSRNGS--RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVF 442 (547)
Q Consensus 366 ~rprlliIsR~~s--R~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~v 442 (547)
..-++++|.|.+. | -+..+|.+.|..|.+..- .+.++. ..+.+++|||+|+.=|.. +-..=|++||++|
T Consensus 164 ~Gk~vvVIG~s~iVG~------p~A~lL~~~gAtVtv~~~-~T~~l~-l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavV 235 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGA------PVAALLMKENATVTIVHS-GTSTED-MIDYLRTADIVIAAMGQPGYVKGEWIKEGAAV 235 (300)
T ss_dssp TTCEEEEECCCTTTHH------HHHHHHHHTTCEEEEECT-TSCHHH-HHHHHHTCSEEEECSCCTTCBCGGGSCTTCEE
T ss_pred CCCEEEEECCCchHHH------HHHHHHHHCCCeEEEEeC-CCCCch-hhhhhccCCEEEECCCCCCCCcHHhcCCCcEE
Confidence 3456888988863 3 366777888999988752 233333 015689999999988875 5556678999999
Q ss_pred EEEe
Q 008963 443 IQVI 446 (547)
Q Consensus 443 IEI~ 446 (547)
|-+-
T Consensus 236 IDvg 239 (300)
T 4a26_A 236 VDVG 239 (300)
T ss_dssp EECC
T ss_pred EEEe
Confidence 9884
No 8
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=62.47 E-value=42 Score=33.93 Aligned_cols=94 Identities=15% Similarity=0.222 Sum_probs=62.2
Q ss_pred CEEEEEecCCCccccCHHHHHHHHHH-cCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhh---------hhccC
Q 008963 368 PKLVILSRNGSRAITNENSLVKMAED-IGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTH---------FLFMK 437 (547)
Q Consensus 368 prlliIsR~~sR~IlNe~Evv~~lk~-~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN---------~lFmp 437 (547)
.++++++|+.. .....+++.+.+.+ .|.++.+.... +..+--+.+..+|++|..-.+||.. .-+++
T Consensus 179 ~~V~i~nR~~~-~~~~a~~la~~~~~~~~~~~~~~~~~---~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~ 254 (315)
T 3tnl_A 179 KEISIFNRKDD-FYANAEKTVEKINSKTDCKAQLFDIE---DHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLR 254 (315)
T ss_dssp SEEEEEECSST-THHHHHHHHHHHHHHSSCEEEEEETT---CHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCC
T ss_pred CEEEEEECCCc-hHHHHHHHHHHhhhhcCCceEEeccc---hHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcC
Confidence 37888888742 23445566666554 46666665532 2333345678999999888887652 22467
Q ss_pred CCcEEEEEecCCCCccccchHHHHHhhcCCeE
Q 008963 438 PGSVFIQVIPLGTDWAAETYYGEPARKLGLKY 469 (547)
Q Consensus 438 pga~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y 469 (547)
++.+|++++-.. ..+.+-..|+..|.+.
T Consensus 255 ~~~~V~DlvY~P----~~T~ll~~A~~~G~~~ 282 (315)
T 3tnl_A 255 PELIVSDVVYKP----TKTRLLEIAEEQGCQT 282 (315)
T ss_dssp TTCEEEESCCSS----SSCHHHHHHHHTTCEE
T ss_pred CCCEEEEeccCC----CCCHHHHHHHHCCCeE
Confidence 899999987331 2466888999999875
No 9
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=59.49 E-value=17 Score=36.81 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=52.3
Q ss_pred CCCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEEEE
Q 008963 366 KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVFIQ 444 (547)
Q Consensus 366 ~rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~vIE 444 (547)
..-++++|.|.+. +- .-+...|...|..|.+..- .+.++. +.+++|||+|+.=|+. +...=|.+||++||-
T Consensus 158 ~gk~vvVIG~s~i---VG-~p~A~lL~~~gAtVtv~hs-~t~~L~---~~~~~ADIVI~Avg~p~lI~~~~vk~GavVID 229 (288)
T 1b0a_A 158 FGLNAVVIGASNI---VG-RPMSMELLLAGCTTTVTHR-FTKNLR---HHVENADLLIVAVGKPGFIPGDWIKEGAIVID 229 (288)
T ss_dssp TTCEEEEECCCTT---TH-HHHHHHHHTTTCEEEEECS-SCSCHH---HHHHHCSEEEECSCCTTCBCTTTSCTTCEEEE
T ss_pred CCCEEEEECCChH---HH-HHHHHHHHHCCCeEEEEeC-CchhHH---HHhccCCEEEECCCCcCcCCHHHcCCCcEEEE
Confidence 3457889988753 11 1266777788999998863 344554 4578999999998876 555556799999998
Q ss_pred Ee
Q 008963 445 VI 446 (547)
Q Consensus 445 I~ 446 (547)
+-
T Consensus 230 Vg 231 (288)
T 1b0a_A 230 VG 231 (288)
T ss_dssp CC
T ss_pred cc
Confidence 74
No 10
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=54.91 E-value=62 Score=32.63 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=61.5
Q ss_pred CEEEEEecCCCccccCHHHHHHHHHH-cCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhh---h------hhccC
Q 008963 368 PKLVILSRNGSRAITNENSLVKMAED-IGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMT---H------FLFMK 437 (547)
Q Consensus 368 prlliIsR~~sR~IlNe~Evv~~lk~-~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLT---N------~lFmp 437 (547)
.++++++|+..| ....+++.+.+.+ .|..+...+. .++.+..+.+..+|++|..-.+||. . .-+++
T Consensus 173 ~~v~v~nRt~~~-~~~a~~la~~~~~~~~~~v~~~~~---~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~ 248 (312)
T 3t4e_A 173 KEIKLFNRKDDF-FEKAVAFAKRVNENTDCVVTVTDL---ADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLR 248 (312)
T ss_dssp SEEEEEECSSTH-HHHHHHHHHHHHHHSSCEEEEEET---TCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSC
T ss_pred CEEEEEECCCch-HHHHHHHHHHhhhccCcceEEech---HhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcC
Confidence 368888877433 3445566655554 4667666553 2332224567899999988888872 1 12567
Q ss_pred CCcEEEEEecCCCCccccchHHHHHhhcCCeE
Q 008963 438 PGSVFIQVIPLGTDWAAETYYGEPARKLGLKY 469 (547)
Q Consensus 438 pga~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y 469 (547)
++.+|++++-.. ..+.|-..|+..|.+.
T Consensus 249 ~~~~v~D~vY~P----~~T~ll~~A~~~G~~~ 276 (312)
T 3t4e_A 249 PELLVTECVYNP----HMTKLLQQAQQAGCKT 276 (312)
T ss_dssp TTCEEEECCCSS----SSCHHHHHHHHTTCEE
T ss_pred CCCEEEEeccCC----CCCHHHHHHHHCCCeE
Confidence 889999987331 2466888999999875
No 11
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=53.73 E-value=16 Score=33.88 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=35.9
Q ss_pred HHHHHHHHc-CCEEEEEec-CCCCCHHHHHHHHh--cCCeEEeechhhhhh
Q 008963 386 SLVKMAEDI-GFQVQVVRP-DRTSELAKIYRALN--SSDVMVGVHGAAMTH 432 (547)
Q Consensus 386 Evv~~lk~~-GfeV~v~e~-~~~~s~~eQi~l~~--~aDVlVGvHGAGLTN 432 (547)
+|.+.|++. |++|+.... +...++.+.+++.+ .||++|++|--+..|
T Consensus 36 ~l~~~L~~~~G~~V~ltR~~D~~~~L~~R~~~an~~~adlfiSiH~Na~~~ 86 (179)
T 1jwq_A 36 KVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGS 86 (179)
T ss_dssp HHHHHHHTCTTEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEEEECCSS
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCCHHHHHHHHHhhCCCEEEEEccCCCCC
Confidence 455666777 999987653 24578999999987 699999999766543
No 12
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=50.79 E-value=35 Score=34.69 Aligned_cols=71 Identities=21% Similarity=0.377 Sum_probs=51.3
Q ss_pred CCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeech-hhhhhhhccCCCcEEEEE
Q 008963 367 KPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHG-AAMTHFLFMKPGSVFIQV 445 (547)
Q Consensus 367 rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHG-AGLTN~lFmppga~vIEI 445 (547)
--++++|.|+.. -=.-+..+|.+.|..|.+... .+.++.+ ..++|||+|..=| +++...=|.+||++||-+
T Consensus 179 Gk~vvViGRS~i----VGkPla~LL~~~~ATVTi~Hs-~T~dl~~---~~~~ADIvV~A~G~p~~i~~d~vk~GavVIDV 250 (303)
T 4b4u_A 179 GKHAVVVGRSAI----LGKPMAMMLLQANATVTICHS-RTQNLPE---LVKQADIIVGAVGKAELIQKDWIKQGAVVVDA 250 (303)
T ss_dssp TCEEEEECCCTT----THHHHHHHHHHTTCEEEEECT-TCSSHHH---HHHTCSEEEECSCSTTCBCGGGSCTTCEEEEC
T ss_pred CCEEEEEecccc----ccchHHHHHHhcCCEEEEecC-CCCCHHH---HhhcCCeEEeccCCCCccccccccCCCEEEEe
Confidence 346888988763 112356667778999988763 4566654 5789999998766 556666689999999985
No 13
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=50.15 E-value=23 Score=32.88 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=30.0
Q ss_pred HHHHHHHcCCEE-EEEecCCC-C----CHHHHHHHHh--cCCeEEeechhhh
Q 008963 387 LVKMAEDIGFQV-QVVRPDRT-S----ELAKIYRALN--SSDVMVGVHGAAM 430 (547)
Q Consensus 387 vv~~lk~~GfeV-~v~e~~~~-~----s~~eQi~l~~--~aDVlVGvHGAGL 430 (547)
|.+.|++.|++| +++....+ . ++.+.+++.+ .||++|++|--+.
T Consensus 38 l~~~L~~~G~~V~v~ltR~d~~~~~~~~L~~R~~~An~~~aDlfISIH~Na~ 89 (180)
T 3qay_A 38 LADTFRKEGHKVDVIICPEKQFKTKNEEKSYKIPRVNSGGYDLLIELHLNAS 89 (180)
T ss_dssp HHHHHHHTTCEEEEECCCSSCCSSTTHHHHHHHHHHHHSCCSEEEEEEEECS
T ss_pred HHHHHHhcCCcceEEECCCCCccccccCHHHHHHHHHhcCCCEEEEeeeCCC
Confidence 456666779997 33322111 2 4888888886 5999999997654
No 14
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=47.01 E-value=23 Score=34.43 Aligned_cols=46 Identities=15% Similarity=0.211 Sum_probs=34.4
Q ss_pred HHHHHHHcC-CEEEEEec-CCCCCHHHHHHHHh--cCCeEEeechhhhhh
Q 008963 387 LVKMAEDIG-FQVQVVRP-DRTSELAKIYRALN--SSDVMVGVHGAAMTH 432 (547)
Q Consensus 387 vv~~lk~~G-feV~v~e~-~~~~s~~eQi~l~~--~aDVlVGvHGAGLTN 432 (547)
|.+.|++.| ++|+.... +...++.+.+++.+ .||++|++|-.+..+
T Consensus 39 l~~~L~~~g~~~V~~tR~~D~~~~l~~R~~~An~~~adlfiSiH~Na~~~ 88 (234)
T 3ne8_A 39 LRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDV 88 (234)
T ss_dssp HHHHHHHSSSEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEECCCCSC
T ss_pred HHHHHHhCCCcEEEEeCCCCCcCCHHHHHHHHHhhCCCEEEEEecCCCCC
Confidence 445555667 99887543 34578999999987 799999999766544
No 15
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=46.21 E-value=81 Score=31.39 Aligned_cols=132 Identities=11% Similarity=0.041 Sum_probs=71.1
Q ss_pred HHHHHHHHcCCEEEEEecCCC--------CCHHHHHHHHhcCCeEEeech--h---hhh---hhhccCCCcEEEEEecCC
Q 008963 386 SLVKMAEDIGFQVQVVRPDRT--------SELAKIYRALNSSDVMVGVHG--A---AMT---HFLFMKPGSVFIQVIPLG 449 (547)
Q Consensus 386 Evv~~lk~~GfeV~v~e~~~~--------~s~~eQi~l~~~aDVlVGvHG--A---GLT---N~lFmppga~vIEI~P~g 449 (547)
.+.+.++..|++|...+.... .++. +++..||+++-.=- . ++. .+-.|+||+.+|-+---+
T Consensus 136 ~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~---ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~ 212 (290)
T 3gvx_A 136 RVAHLAKAFGMRVIAYTRSSVDQNVDVISESPA---DLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARAD 212 (290)
T ss_dssp HHHHHHHHHTCEEEEECSSCCCTTCSEECSSHH---HHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGG
T ss_pred HHHHHHHhhCcEEEEEeccccccccccccCChH---HHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhc
Confidence 467888899999998875321 1443 45789999875332 1 221 123489999999875332
Q ss_pred CCccccchHHHHHhhcCCeEEEEEecCCCCcccccCCCCCCccCCCCcc---cccCcceeeeeecCCccEEEehHHHHHH
Q 008963 450 TDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSV---NEKGWQYTKTIYLDGQNVRLNLRRFQKR 526 (547)
Q Consensus 450 ~~~~~~~~Y~~lA~~~Gl~Y~~y~i~~eEssL~~~y~~dhpv~~dP~~i---~~kgW~~~~~~YL~~QnV~lDi~rF~~~ 526 (547)
. ....--....+.-++.+..-.+...|. . ||.+..|..+ |..||.. .+.+.++
T Consensus 213 ~--vd~~aL~~aL~~g~i~ga~lDV~~~EP-------~-~pL~~~~nvilTPHiag~~t--------------~e~~~~~ 268 (290)
T 3gvx_A 213 V--VSKPDMIGFLKERSDVWYLSDVWWNEP-------E-ITETNLRNAILSPHVAGGMS--------------GEIMDIA 268 (290)
T ss_dssp G--BCHHHHHHHHHHCTTCEEEESCCTTTT-------S-CCSCCCSSEEECCSCSSCBT--------------TBCCHHH
T ss_pred c--cCCcchhhhhhhccceEEeeccccCCc-------c-cchhhhhhhhcCccccCCcc--------------chHHHHH
Confidence 1 111111222223456676665554442 2 5555555432 5443421 2234566
Q ss_pred HHHHHHHHHhhccccccC
Q 008963 527 LVRAYDYSINRISQNCHH 544 (547)
Q Consensus 527 L~~A~~~l~~~~~~~~~~ 544 (547)
.+.+.+.+.+..+-.++|
T Consensus 269 ~~~~~~ni~~~~~~~~~~ 286 (290)
T 3gvx_A 269 IQLAFENVRNFFEGEGHH 286 (290)
T ss_dssp HHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHhhhcCCCcc
Confidence 777778887777555544
No 16
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=44.70 E-value=26 Score=35.80 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=50.8
Q ss_pred CCCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecC---------------CC------CCHHHHHHHHhcCCeEEe
Q 008963 366 KKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPD---------------RT------SELAKIYRALNSSDVMVG 424 (547)
Q Consensus 366 ~rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~---------------~~------~s~~eQi~l~~~aDVlVG 424 (547)
..-++++|.|... +.. -+...|...|..|.+.+-. .. .+..+--+.+++|||+|+
T Consensus 176 ~gk~vvVIG~G~i---VG~-~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 176 YGKKCIVINRSEI---VGR-PLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTCEEEEECCCTT---THH-HHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCcc---hHH-HHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 3457889988742 111 1566777789888877421 00 112566788999999999
Q ss_pred echhh--hhhhhccCCCcEEEEE
Q 008963 425 VHGAA--MTHFLFMKPGSVFIQV 445 (547)
Q Consensus 425 vHGAG--LTN~lFmppga~vIEI 445 (547)
.=|+- +-..=|++||++||-|
T Consensus 252 Atg~p~~vI~~e~vk~GavVIDV 274 (320)
T 1edz_A 252 GVPSENYKFPTEYIKEGAVCINF 274 (320)
T ss_dssp CCCCTTCCBCTTTSCTTEEEEEC
T ss_pred CCCCCcceeCHHHcCCCeEEEEc
Confidence 99985 2333456889988887
No 17
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=44.61 E-value=37 Score=34.14 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=51.1
Q ss_pred CCCEEEEEecCCCccccCHHHHHHHHHHc--CCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhh-hhhhhccCCCcEE
Q 008963 366 KKPKLVILSRNGSRAITNENSLVKMAEDI--GFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAA-MTHFLFMKPGSVF 442 (547)
Q Consensus 366 ~rprlliIsR~~sR~IlNe~Evv~~lk~~--GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAG-LTN~lFmppga~v 442 (547)
..-++++|.|.+. +.. -+...|... |..|.+..- .+.++ .+.+++|||+|+.=|+. +-..=|++||++|
T Consensus 157 ~gk~vvVvG~s~i---VG~-p~A~lL~~~g~~atVtv~h~-~t~~L---~~~~~~ADIVI~Avg~p~~I~~~~vk~GavV 228 (281)
T 2c2x_A 157 AGAHVVVIGRGVT---VGR-PLGLLLTRRSENATVTLCHT-GTRDL---PALTRQADIVVAAVGVAHLLTADMVRPGAAV 228 (281)
T ss_dssp TTCEEEEECCCTT---THH-HHHHHHTSTTTCCEEEEECT-TCSCH---HHHHTTCSEEEECSCCTTCBCGGGSCTTCEE
T ss_pred CCCEEEEECCCcH---HHH-HHHHHHhcCCCCCEEEEEEC-chhHH---HHHHhhCCEEEECCCCCcccCHHHcCCCcEE
Confidence 3457889988753 111 255666677 788888752 23344 45689999999999876 6555677999999
Q ss_pred EEEe
Q 008963 443 IQVI 446 (547)
Q Consensus 443 IEI~ 446 (547)
|-+-
T Consensus 229 IDVg 232 (281)
T 2c2x_A 229 IDVG 232 (281)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9873
No 18
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=43.74 E-value=36 Score=31.71 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=31.4
Q ss_pred HHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEe
Q 008963 386 SLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVG 424 (547)
Q Consensus 386 Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVG 424 (547)
++++.+++.|.+|.+++..+..++.+..+.+..||+||=
T Consensus 38 ~~~~~~~~~g~~v~~~dL~~~~d~~~~~~~l~~AD~iV~ 76 (204)
T 2amj_A 38 VADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIW 76 (204)
T ss_dssp HHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHcCCEEEEEeCCccccHHHHHHHHHhCCEEEE
Confidence 355666667999999887656789999999999999874
No 19
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=38.47 E-value=59 Score=32.14 Aligned_cols=91 Identities=14% Similarity=0.112 Sum_probs=55.6
Q ss_pred EEEEEecCCC-ccccCHHHHHHHHHHcCC-EEEEEecCC-----------CCCHHHHHHHHhcCCeEEeechhhhhhh--
Q 008963 369 KLVILSRNGS-RAITNENSLVKMAEDIGF-QVQVVRPDR-----------TSELAKIYRALNSSDVMVGVHGAAMTHF-- 433 (547)
Q Consensus 369 rlliIsR~~s-R~IlNe~Evv~~lk~~Gf-eV~v~e~~~-----------~~s~~eQi~l~~~aDVlVGvHGAGLTN~-- 433 (547)
++++|.=.+. | .++..|.+.|. +|.++.-.. ..++.+..+.+.++|++|..-.+|+..-
T Consensus 119 ~vlvlGaGg~g~------aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~ 192 (277)
T 3don_A 119 YILILGAGGASK------GIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTD 192 (277)
T ss_dssp CEEEECCSHHHH------HHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------C
T ss_pred EEEEECCcHHHH------HHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCc
Confidence 4666653321 3 36677777787 676654210 0145555566889999998888887432
Q ss_pred -----hccCCCcEEEEEecCCCCccccchHHHHHhhcCCeE
Q 008963 434 -----LFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKY 469 (547)
Q Consensus 434 -----lFmppga~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y 469 (547)
-+++++++|+.++-.. ..+.+-..|+..|++.
T Consensus 193 ~~l~~~~l~~~~~V~D~vY~P----~~T~ll~~A~~~G~~~ 229 (277)
T 3don_A 193 SVISLNRLASHTLVSDIVYNP----YKTPILIEAEQRGNPI 229 (277)
T ss_dssp CSSCCTTCCSSCEEEESCCSS----SSCHHHHHHHHTTCCE
T ss_pred CCCCHHHcCCCCEEEEecCCC----CCCHHHHHHHHCcCEE
Confidence 2467899999986221 1345778899999875
No 20
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=38.31 E-value=36 Score=32.63 Aligned_cols=39 Identities=13% Similarity=0.189 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEe
Q 008963 386 SLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVG 424 (547)
Q Consensus 386 Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVG 424 (547)
++++.+++.|.+|.+++..+..++.+..+.+..||+||=
T Consensus 51 ~~~~~l~~~g~ev~~~dL~~~~Dv~~~~~~l~~aD~iv~ 89 (218)
T 3rpe_A 51 VAADFLRESGHQVKITTVDQGYDIESEIENYLWADTIIY 89 (218)
T ss_dssp HHHHHHHHTTCCEEEEEGGGCCCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHhhCCCEEEEEECCCccCHHHHHHHHHhCCEEEE
Confidence 466667778999999887667789999999999999874
No 21
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=38.13 E-value=20 Score=36.74 Aligned_cols=43 Identities=28% Similarity=0.309 Sum_probs=28.9
Q ss_pred HHHHHHHcCCEEE-E-Eec--CCCCCHHHHHHHHh--cCCeEEeechhh
Q 008963 387 LVKMAEDIGFQVQ-V-VRP--DRTSELAKIYRALN--SSDVMVGVHGAA 429 (547)
Q Consensus 387 vv~~lk~~GfeV~-v-~e~--~~~~s~~eQi~l~~--~aDVlVGvHGAG 429 (547)
|.+.|++.|++|. + +.- +...++.+.+++.+ .||++|++|--+
T Consensus 46 l~~~L~~~G~~V~V~m~tR~~D~~~~L~~R~~~An~~~ADlfISIH~Na 94 (326)
T 1xov_A 46 ASDELKREGHNVKTFIDRTSTTQSANLNKIVNWHNANPADVHISVHLNA 94 (326)
T ss_dssp HHHHHHHTTCEEEEEEESSCCSHHHHHHHHHHHHHHSCCSEEEEEEEEC
T ss_pred HHHHHHhCCCceEEEEecCCCCccCCHHHHHHHHHhcCCCEEEEEeccC
Confidence 4455566799963 3 331 12246788888876 499999999765
No 22
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=36.13 E-value=39 Score=33.64 Aligned_cols=88 Identities=22% Similarity=0.228 Sum_probs=57.4
Q ss_pred CEEEEEecCCC-ccccCHHHHHHHHHHcCC-EEEEEecCCCC-------------CHHHHHHHHhcCCeEEeechhhhhh
Q 008963 368 PKLVILSRNGS-RAITNENSLVKMAEDIGF-QVQVVRPDRTS-------------ELAKIYRALNSSDVMVGVHGAAMTH 432 (547)
Q Consensus 368 prlliIsR~~s-R~IlNe~Evv~~lk~~Gf-eV~v~e~~~~~-------------s~~eQi~l~~~aDVlVGvHGAGLTN 432 (547)
-+++++.-.+. | .++.+|.+.|. +|.++.- +. ++.+.-+ + .+|++|..-.+||..
T Consensus 123 k~vlvlGaGGaar------aia~~L~~~G~~~v~v~nR--t~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~ 192 (282)
T 3fbt_A 123 NICVVLGSGGAAR------AVLQYLKDNFAKDIYVVTR--NPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYP 192 (282)
T ss_dssp SEEEEECSSTTHH------HHHHHHHHTTCSEEEEEES--CHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTT
T ss_pred CEEEEECCcHHHH------HHHHHHHHcCCCEEEEEeC--CHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccC
Confidence 46777776554 4 36777777887 7777652 21 1222112 3 899999888887642
Q ss_pred --------hhccCCCcEEEEEecCCCCccccchHHHHHhhcCCeE
Q 008963 433 --------FLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKY 469 (547)
Q Consensus 433 --------~lFmppga~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y 469 (547)
.-+++++.+|++++=.. ..+.+-..|+..|.+.
T Consensus 193 ~~~~~pi~~~~l~~~~~v~DlvY~P----~~T~ll~~A~~~G~~~ 233 (282)
T 3fbt_A 193 KEGESPVDKEVVAKFSSAVDLIYNP----VETLFLKYARESGVKA 233 (282)
T ss_dssp STTCCSSCHHHHTTCSEEEESCCSS----SSCHHHHHHHHTTCEE
T ss_pred CCccCCCCHHHcCCCCEEEEEeeCC----CCCHHHHHHHHCcCeE
Confidence 22467889999986221 2466888999999875
No 23
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=35.71 E-value=39 Score=30.22 Aligned_cols=55 Identities=15% Similarity=0.249 Sum_probs=39.0
Q ss_pred CCCEEEEEecCCC-ccccCHHHHHHHHHHcCCEEEEEecCCCC-CHHHHHHHHhcCCeEE
Q 008963 366 KKPKLVILSRNGS-RAITNENSLVKMAEDIGFQVQVVRPDRTS-ELAKIYRALNSSDVMV 423 (547)
Q Consensus 366 ~rprlliIsR~~s-R~IlNe~Evv~~lk~~GfeV~v~e~~~~~-s~~eQi~l~~~aDVlV 423 (547)
++.-|+|-|..|+ +++.+ .|.+.+++.|.+|.+.+.. .. +..+.+..+..+|.+|
T Consensus 5 ~kv~IvY~S~~GnT~~iA~--~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~d~ii 61 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLAQ--AIINGITKTGVGVDVVDLG-AAVDLQELRELVGRCTGLV 61 (159)
T ss_dssp CEEEEEECTTSTTHHHHHH--HHHHHHHHTTCEEEEEESS-SCCCHHHHHHHHHTEEEEE
T ss_pred CEEEEEEECCChHHHHHHH--HHHHHHHHCCCeEEEEECc-CcCCHHHHHHHHHhCCEEE
Confidence 3456677788775 66654 3667777789999888753 45 7888877788888654
No 24
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=33.22 E-value=94 Score=30.07 Aligned_cols=57 Identities=19% Similarity=0.243 Sum_probs=37.6
Q ss_pred CCCEEEEEecCCCccccCHHH----HHHHHHHcCCEEEEEecCCCCC-----------HHHHHHHHhcCCeEEe
Q 008963 366 KKPKLVILSRNGSRAITNENS----LVKMAEDIGFQVQVVRPDRTSE-----------LAKIYRALNSSDVMVG 424 (547)
Q Consensus 366 ~rprlliIsR~~sR~IlNe~E----vv~~lk~~GfeV~v~e~~~~~s-----------~~eQi~l~~~aDVlVG 424 (547)
...+|++|.=.. |+=-|-.. +++.+++.|.+|.+++.. +++ +.+.++.+..||.+|=
T Consensus 33 ~~mkIliI~GS~-r~~s~t~~La~~~~~~l~~~g~eve~idL~-~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~ 104 (247)
T 2q62_A 33 HRPRILILYGSL-RTVSYSRLLAEEARRLLEFFGAEVKVFDPS-GLPLPDAAPVSHPKVQELRELSIWSEGQVW 104 (247)
T ss_dssp SCCEEEEEECCC-CSSCHHHHHHHHHHHHHHHTTCEEEECCCT-TCCCTTSSCTTSHHHHHHHHHHHHCSEEEE
T ss_pred CCCeEEEEEccC-CCCCHHHHHHHHHHHHHhhCCCEEEEEEhh-cCCCCcCCCCCCHHHHHHHHHHHHCCEEEE
Confidence 456888876221 33333333 445556679999988753 345 7888899999999874
No 25
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=29.80 E-value=1.2e+02 Score=29.81 Aligned_cols=56 Identities=18% Similarity=0.261 Sum_probs=39.2
Q ss_pred HHHHHHhcCCeEEeechhhhhh--------hhccCCCcEEEEEecCCCCccccchHHHHHhhcCCeEE
Q 008963 411 KIYRALNSSDVMVGVHGAAMTH--------FLFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLKYI 470 (547)
Q Consensus 411 eQi~l~~~aDVlVGvHGAGLTN--------~lFmppga~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y~ 470 (547)
+-.+.+..+||+|..-++|+.- .-++++|++|+.+.-.. ..+-+...|+..|.+++
T Consensus 197 ~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P----~~T~ll~~A~~~G~~~v 260 (297)
T 2egg_A 197 EAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNP----LETKWLKEAKARGARVQ 260 (297)
T ss_dssp HHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSS----SSCHHHHHHHHTTCEEE
T ss_pred HHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCC----CCCHHHHHHHHCcCEEE
Confidence 3345678899999999999841 12466899999986321 22347778899998763
No 26
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=29.37 E-value=1.3e+02 Score=28.33 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=46.7
Q ss_pred CCEEEEEecCCC--ccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhh
Q 008963 367 KPKLVILSRNGS--RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTH 432 (547)
Q Consensus 367 rprlliIsR~~s--R~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN 432 (547)
.+|++||.=... ..=.|...+.++++++|+++.+++.. ..+.++..+.+.+||.++=.=|.-.+-
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~-~~~~~~~~~~l~~ad~I~l~GG~~~~l 93 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIA-TESLGEITTKLRKNDFIYVTGGNTFFL 93 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTT-TSCHHHHHHHHHHSSEEEECCSCHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEec-CCChHHHHHHHHhCCEEEECCCCHHHH
Confidence 489999963321 22247788999999999999887542 346677778899999998655655543
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=29.32 E-value=1.7e+02 Score=25.39 Aligned_cols=38 Identities=5% Similarity=-0.064 Sum_probs=28.0
Q ss_pred CCCCCCEEEEEecCCCccccCHHHHHHHHHHc-CCEEEEEe
Q 008963 363 DQSKKPKLVILSRNGSRAITNENSLVKMAEDI-GFQVQVVR 402 (547)
Q Consensus 363 ~~~~rprlliIsR~~sR~IlNe~Evv~~lk~~-GfeV~v~e 402 (547)
-+.+++.++++.|-. ..-|.+.++++++++ .+.++++-
T Consensus 19 ~~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G 57 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVG 57 (177)
T ss_dssp CCCCCSCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEB
T ss_pred cCCCCCEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEe
Confidence 356788899998865 345888999999886 56666554
No 28
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=28.78 E-value=1.4e+02 Score=29.57 Aligned_cols=58 Identities=12% Similarity=0.141 Sum_probs=38.2
Q ss_pred CCCCEEEEEecCCCccccCHH----HHHHHHHHcCCEEEEEecCCCCC------------HHHHHHHHhcCCeEEe
Q 008963 365 SKKPKLVILSRNGSRAITNEN----SLVKMAEDIGFQVQVVRPDRTSE------------LAKIYRALNSSDVMVG 424 (547)
Q Consensus 365 ~~rprlliIsR~~sR~IlNe~----Evv~~lk~~GfeV~v~e~~~~~s------------~~eQi~l~~~aDVlVG 424 (547)
...++|++|.=.. |+=-|-. ++++.+++.|.+|.+++.. +++ +.+.++.+..||.+|=
T Consensus 56 ~~~mKILiI~GS~-R~~S~T~~La~~~~~~l~~~G~eveiidL~-dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~ 129 (279)
T 2fzv_A 56 APPVRILLLYGSL-RARSFSRLAVEEAARLLQFFGAETRIFDPS-DLPLPDQVQSDDHPAVKELRALSEWSEGQVW 129 (279)
T ss_dssp CSCCEEEEEESCC-SSSCHHHHHHHHHHHHHHHTTCEEEEBCCT-TCCCTTTSGGGCCHHHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEEEeCC-CCCCHHHHHHHHHHHHHhhCCCEEEEEehh-cCCCCccCccCCCHHHHHHHHHHHHCCeEEE
Confidence 3457888886221 3323322 3555666679999998753 344 7778899999999873
No 29
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=28.02 E-value=41 Score=33.19 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=21.3
Q ss_pred CHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHH
Q 008963 383 NENSLVKMAEDIGFQVQVVRPDRTSELAKIYRAL 416 (547)
Q Consensus 383 Ne~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~ 416 (547)
..+.|.+.++++||+|.+.+-.....+.+.++-+
T Consensus 47 D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~ 80 (277)
T 1nw9_B 47 DCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLEL 80 (277)
T ss_dssp HHHHHHHHHHHTTEEEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4456889999999999887521122344444444
No 30
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=28.01 E-value=1e+02 Score=28.00 Aligned_cols=68 Identities=15% Similarity=0.142 Sum_probs=45.9
Q ss_pred CCCCEEEEEecCCC-cccc--CHHHHHHHHHHcCCEEEEEe--cCCCCCHHHHHHHHh---cCCeEEeechhhhhh
Q 008963 365 SKKPKLVILSRNGS-RAIT--NENSLVKMAEDIGFQVQVVR--PDRTSELAKIYRALN---SSDVMVGVHGAAMTH 432 (547)
Q Consensus 365 ~~rprlliIsR~~s-R~Il--Ne~Evv~~lk~~GfeV~v~e--~~~~~s~~eQi~l~~---~aDVlVGvHGAGLTN 432 (547)
-++||+-||+=... -++. |-.-+.+.|++.|+++.... +++.-.+.+.++... .+|++|.-=|.|.+.
T Consensus 8 ~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~ 83 (172)
T 1mkz_A 8 FIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTE 83 (172)
T ss_dssp CCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSST
T ss_pred CCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCC
Confidence 45788888775443 2344 44567899999999876432 333345666665543 399999999998775
No 31
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=27.89 E-value=1.7e+02 Score=28.23 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=49.3
Q ss_pred CCCEEEEE--ecCCCcccc--CHHHHHHHHHHcCCEEEEE-e-c------------------CCCCCHHHHHHHHhcCCe
Q 008963 366 KKPKLVIL--SRNGSRAIT--NENSLVKMAEDIGFQVQVV-R-P------------------DRTSELAKIYRALNSSDV 421 (547)
Q Consensus 366 ~rprlliI--sR~~sR~Il--Ne~Evv~~lk~~GfeV~v~-e-~------------------~~~~s~~eQi~l~~~aDV 421 (547)
.+|.+++. +|...|++- +..|+++.|.+.|+.++++ . + ...+++.|-+++++.||+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~l 256 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKF 256 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCSE
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCCE
Confidence 45555543 222235555 4556666665567777664 1 1 123679999999999999
Q ss_pred EEeechhhhhhhhccCCCcEEEEEecC
Q 008963 422 MVGVHGAAMTHFLFMKPGSVFIQVIPL 448 (547)
Q Consensus 422 lVGvHGAGLTN~lFmppga~vIEI~P~ 448 (547)
+||+= +|.+|+--+ =|.-+|-|+..
T Consensus 257 ~I~~D-SG~~HlAaa-~g~P~v~lfg~ 281 (326)
T 2gt1_A 257 VVSVD-TGLSHLTAA-LDRPNITVYGP 281 (326)
T ss_dssp EEEES-SHHHHHHHH-TTCCEEEEESS
T ss_pred EEecC-CcHHHHHHH-cCCCEEEEECC
Confidence 99994 333444333 36666777644
No 32
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.14 E-value=73 Score=28.26 Aligned_cols=52 Identities=19% Similarity=0.255 Sum_probs=35.8
Q ss_pred EEEEEecCCC-ccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEE
Q 008963 369 KLVILSRNGS-RAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMV 423 (547)
Q Consensus 369 rlliIsR~~s-R~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlV 423 (547)
-++|.|..|+ +++.+ .|.+.+++.|.+|.+.+. ...+..+.+.-+.++|.+|
T Consensus 4 ~IvY~S~tGnT~~~A~--~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~d~ii 56 (161)
T 3hly_A 4 LIGYLSDYGYSDRLSQ--AIGRGLVKTGVAVEMVDL-RAVDPQELIEAVSSARGIV 56 (161)
T ss_dssp EEEECTTSTTHHHHHH--HHHHHHHHTTCCEEEEET-TTCCHHHHHHHHHHCSEEE
T ss_pred EEEEECCChHHHHHHH--HHHHHHHhCCCeEEEEEC-CCCCHHHHHHHHHhCCEEE
Confidence 4667777765 55543 356666777999888775 3567777777778888754
No 33
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=26.31 E-value=3.3e+02 Score=26.98 Aligned_cols=81 Identities=7% Similarity=0.072 Sum_probs=52.1
Q ss_pred CCCEEEEEe--cCCCcccc--CHHHHHHHHHHcCCEEEEEec---------------------CCCCCHHHHHHHHhcCC
Q 008963 366 KKPKLVILS--RNGSRAIT--NENSLVKMAEDIGFQVQVVRP---------------------DRTSELAKIYRALNSSD 420 (547)
Q Consensus 366 ~rprlliIs--R~~sR~Il--Ne~Evv~~lk~~GfeV~v~e~---------------------~~~~s~~eQi~l~~~aD 420 (547)
.+|.+++.- |...|++- +..|+++.|.+.|++++++.. ...+++.|-+++++.||
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~ 263 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCN 263 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCC
Confidence 456655543 33346654 566888877777888776421 12478999999999999
Q ss_pred eEEeechhhhhhhhccCCCcEEEEEecC
Q 008963 421 VMVGVHGAAMTHFLFMKPGSVFIQVIPL 448 (547)
Q Consensus 421 VlVGvHGAGLTN~lFmppga~vIEI~P~ 448 (547)
++||+= +|.+|+.-+ -|.-+|-|+..
T Consensus 264 ~~i~~D-sG~~HlAaa-~g~P~v~lfg~ 289 (349)
T 3tov_A 264 LLITND-SGPMHVGIS-QGVPIVALYGP 289 (349)
T ss_dssp EEEEES-SHHHHHHHT-TTCCEEEECSS
T ss_pred EEEECC-CCHHHHHHh-cCCCEEEEECC
Confidence 999973 444554322 36667777644
No 34
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=26.11 E-value=2.8e+02 Score=26.73 Aligned_cols=82 Identities=12% Similarity=0.154 Sum_probs=51.4
Q ss_pred CCCEEEEEe--cC-CCcccc--CHHHHHHHHHHcCCEEEEEe-------------------------cCCCCCHHHHHHH
Q 008963 366 KKPKLVILS--RN-GSRAIT--NENSLVKMAEDIGFQVQVVR-------------------------PDRTSELAKIYRA 415 (547)
Q Consensus 366 ~rprlliIs--R~-~sR~Il--Ne~Evv~~lk~~GfeV~v~e-------------------------~~~~~s~~eQi~l 415 (547)
.+|.+++.- |. ..|++- +..++++.|.+.|+.++++. ....+++.|.+++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHH
Confidence 345555432 22 225555 55677777766677766531 1134789999999
Q ss_pred HhcCCeEEeechhhhhhhhccCCCcEEEEEecCC
Q 008963 416 LNSSDVMVGVHGAAMTHFLFMKPGSVFIQVIPLG 449 (547)
Q Consensus 416 ~~~aDVlVGvHGAGLTN~lFmppga~vIEI~P~g 449 (547)
++.||++||+= +|.+|+.-+ =|.-+|-|+...
T Consensus 259 i~~a~l~I~~D-sg~~HlAaa-~g~P~v~lfg~t 290 (348)
T 1psw_A 259 IAACKAIVTND-SGLMHVAAA-LNRPLVALYGPS 290 (348)
T ss_dssp HHTSSEEEEES-SHHHHHHHH-TTCCEEEEESSS
T ss_pred HHhCCEEEecC-CHHHHHHHH-cCCCEEEEECCC
Confidence 99999999984 444555433 466677777544
No 35
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=25.65 E-value=1.3e+02 Score=32.29 Aligned_cols=98 Identities=10% Similarity=-0.014 Sum_probs=69.6
Q ss_pred CCCCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeech-hhhhhhhccC--CCcE
Q 008963 365 SKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHG-AAMTHFLFMK--PGSV 441 (547)
Q Consensus 365 ~~rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHG-AGLTN~lFmp--pga~ 441 (547)
..+++|-||.=- .---|..|+.+.|++.|.+|+.+-+ ...+++ .++-+.+|++-|.++. ++..-+-+|. =|.-
T Consensus 218 ~~~~~VNIiG~~--~~~gD~~eik~lL~~~Gi~v~~~~~-g~~t~~-ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP 293 (492)
T 3u7q_A 218 STPYDVAIIGDY--NIGGDAWSSRILLEEMGLRCVAQWS-GDGSIS-EIELTPKVKLNLVHCYRSMNYISRHMEEKYGIP 293 (492)
T ss_dssp CCTTEEEEEEEC--CBTTTTHHHHHHHHHTTCEEEEEEE-TTCCHH-HHHHGGGCSEEEESCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCcEEEECCC--CChhhHHHHHHHHHHCCCeEEEEeC-CCCCHH-HHHhhhcCcEEEEEChHHHHHHHHHHHHHhCCc
Confidence 345677777522 2234678999999999999987644 356665 4677889999887753 5655555664 3677
Q ss_pred EEEEecCCCCccccchHHHHHhhcCC
Q 008963 442 FIQVIPLGTDWAAETYYGEPARKLGL 467 (547)
Q Consensus 442 vIEI~P~g~~~~~~~~Y~~lA~~~Gl 467 (547)
.+++-|+|.+- ...|++.+|+..|.
T Consensus 294 ~i~~~p~G~~~-T~~~L~~ia~~~g~ 318 (492)
T 3u7q_A 294 WMEYNFFGPTK-TIESLRAIAAKFDE 318 (492)
T ss_dssp EEECCCSSHHH-HHHHHHHHHTTSCH
T ss_pred eEecCccCHHH-HHHHHHHHHHHhCC
Confidence 88888888542 35688999999984
No 36
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=25.48 E-value=1.5e+02 Score=26.62 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=41.0
Q ss_pred CCCCEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCe-EEee
Q 008963 365 SKKPKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDV-MVGV 425 (547)
Q Consensus 365 ~~rprlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDV-lVGv 425 (547)
.++||+++..=.+.-.=+...-+..+++..||+|+.+. ...+.++.++.+...+. +||+
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG--~~~p~e~lv~aa~~~~~diV~l 75 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTG--LRQTPEQVAMAAVQEDVDVIGV 75 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCC--SBCCHHHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECC--CCCCHHHHHHHHHhcCCCEEEE
Confidence 46788887765554455555567788899999999765 35788888888864433 4443
No 37
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=24.19 E-value=1.9e+02 Score=28.42 Aligned_cols=87 Identities=17% Similarity=0.165 Sum_probs=53.8
Q ss_pred EEEEEecCCCccccCHHHHHHHHHHc--CCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhhh-------hhccCCC
Q 008963 369 KLVILSRNGSRAITNENSLVKMAEDI--GFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMTH-------FLFMKPG 439 (547)
Q Consensus 369 rlliIsR~~sR~IlNe~Evv~~lk~~--GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLTN-------~lFmppg 439 (547)
++++++|+. ...+++.+.+... +.++...+. .++. +.+..+|++|..-.+|+.. .-+++++
T Consensus 153 ~v~i~~R~~----~~a~~la~~~~~~~~~~~i~~~~~---~~l~---~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~ 222 (283)
T 3jyo_A 153 KLQVADLDT----SRAQALADVINNAVGREAVVGVDA---RGIE---DVIAAADGVVNATPMGMPAHPGTAFDVSCLTKD 222 (283)
T ss_dssp EEEEECSSH----HHHHHHHHHHHHHHTSCCEEEECS---TTHH---HHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTT
T ss_pred EEEEEECCH----HHHHHHHHHHHhhcCCceEEEcCH---HHHH---HHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCC
Confidence 566665543 2234455555543 344544432 1233 4577899999888877653 2256788
Q ss_pred cEEEEEecCCCCccccchHHHHHhhcCCeE
Q 008963 440 SVFIQVIPLGTDWAAETYYGEPARKLGLKY 469 (547)
Q Consensus 440 a~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y 469 (547)
.+|++++-.. ..+.+-..|+..|.+.
T Consensus 223 ~~v~DlvY~P----~~T~ll~~A~~~G~~~ 248 (283)
T 3jyo_A 223 HWVGDVVYMP----IETELLKAARALGCET 248 (283)
T ss_dssp CEEEECCCSS----SSCHHHHHHHHHTCCE
T ss_pred CEEEEecCCC----CCCHHHHHHHHCcCeE
Confidence 9999987321 2466888899999875
No 38
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=23.91 E-value=3.6e+02 Score=26.29 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHH-hcCCeEEeechhhhhhh----hccCCCcEEEEEecCCC
Q 008963 384 ENSLVKMAEDIGFQVQVVRPDRTSELAKIYRAL-NSSDVMVGVHGAAMTHF----LFMKPGSVFIQVIPLGT 450 (547)
Q Consensus 384 e~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~-~~aDVlVGvHGAGLTN~----lFmppga~vIEI~P~g~ 450 (547)
.+++.+.|++.|.++.+......-...+.++.+ ..+|++|.+=|=|..|. +.-.+...-|=++|.|.
T Consensus 28 ~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~Gt 99 (304)
T 3s40_A 28 LTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGGT 99 (304)
T ss_dssp HHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECSS
T ss_pred HHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhcCCCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCCc
Confidence 467888999999988877643333445555443 47899999999886554 33323456788999994
No 39
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.78 E-value=1.3e+02 Score=27.62 Aligned_cols=69 Identities=13% Similarity=0.249 Sum_probs=45.7
Q ss_pred CCCCCEEEEEecCC----------CccccCHHHHHHHHHHcCCEEEEEe--cCCCCCHHHHHHH-Hhc--CCeEEeechh
Q 008963 364 QSKKPKLVILSRNG----------SRAITNENSLVKMAEDIGFQVQVVR--PDRTSELAKIYRA-LNS--SDVMVGVHGA 428 (547)
Q Consensus 364 ~~~rprlliIsR~~----------sR~IlNe~Evv~~lk~~GfeV~v~e--~~~~~s~~eQi~l-~~~--aDVlVGvHGA 428 (547)
..++||+.+|+=.. ...=.|-.-+.+.|++.|++++... +++.-.+.+.++. +.+ +|++|.-=|.
T Consensus 12 ~~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 12 APKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp -CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCCCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 35688988877553 3334455568899999999886532 3333345666544 344 8999999888
Q ss_pred hhhh
Q 008963 429 AMTH 432 (547)
Q Consensus 429 GLTN 432 (547)
|.+.
T Consensus 92 s~g~ 95 (178)
T 2pjk_A 92 GYSP 95 (178)
T ss_dssp SSST
T ss_pred CCCC
Confidence 8764
No 40
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=23.68 E-value=68 Score=29.24 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=32.9
Q ss_pred CEEEEEecCCCccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCC---eEEee
Q 008963 368 PKLVILSRNGSRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSD---VMVGV 425 (547)
Q Consensus 368 prlliIsR~~sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aD---VlVGv 425 (547)
|+++||+-.++ + ...+++++++.|.+++++... .+.++..+.+...+ ++|..
T Consensus 1 ~~i~iiDn~~s--~--~~~i~~~l~~~G~~~~v~~~~--~~~~~i~~~l~~~~~~~iil~g 55 (192)
T 1i1q_B 1 ADILLLDNIDS--F--TWNLADQLRTNGHNVVIYRNH--IPAQTLIDRLATMKNPVLMLSP 55 (192)
T ss_dssp CEEEEEECSCS--S--HHHHHHHHHHTTCEEEEEETT--SCSHHHHHHHTTCSSEEEEECC
T ss_pred CcEEEEECCcc--H--HHHHHHHHHHCCCeEEEEECC--CCHHHHHHHhhhccCCeEEECC
Confidence 57888883322 2 234688999999999988743 34454445555444 66654
No 41
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=23.14 E-value=27 Score=39.38 Aligned_cols=115 Identities=16% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCEEEEEecCCC-cccc--------------CHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeechhhhh
Q 008963 367 KPKLVILSRNGS-RAIT--------------NENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHGAAMT 431 (547)
Q Consensus 367 rprlliIsR~~s-R~Il--------------Ne~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHGAGLT 431 (547)
..+|.++.=-|+ |.+. ...=++++|...+++|..+..+ .+.+. ......|||| =+|.+
T Consensus 438 ~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIsfd---DI~e~-e~L~d~DVII---n~G~A 510 (759)
T 2zuv_A 438 ELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFD---DVLAH-GIDSDIDVII---NGGPV 510 (759)
T ss_dssp CSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEEHH---HHHHH-CCCTTCCEEE---EEECT
T ss_pred CceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEecHH---Hhccc-cccccCCEEE---ecCcc
Confidence 467888876664 5444 2233899999999999987631 12222 4578999999 56666
Q ss_pred hhhccCC------------------CcEEEEEecCC-C-CccccchHHHHHhhcCCeEEEEEecCCCCcccccCC----C
Q 008963 432 HFLFMKP------------------GSVFIQVIPLG-T-DWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYD----K 487 (547)
Q Consensus 432 N~lFmpp------------------ga~vIEI~P~g-~-~~~~~~~Y~~lA~~~Gl~Y~~y~i~~eEssL~~~y~----~ 487 (547)
|.+|+.+ |+.+|=|--+. + ++....+|+ +|..+|++...+.- .. ...|+ .
T Consensus 511 ~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGepSsfqg~g~gryFq-LADVLGVd~e~g~d-lp----~gkY~~~~~~ 584 (759)
T 2zuv_A 511 DTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQ-LADVIGVDEERYQT-LS----VDKYFPPVVP 584 (759)
T ss_dssp TSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEESTTEEEEEETTEEET-THHHHSEEECCSSC-TT----BCCBCCCCCC
T ss_pred hhcccCccccCCHHHHHHHHHHHHcCCcEEEeCCccccccccCccccc-HHhhcCcccccCCc-CC----CCccccccCC
Confidence 7777666 78888776332 2 121224444 99999988854432 11 34443 4
Q ss_pred CCCccCC
Q 008963 488 NDPVLRD 494 (547)
Q Consensus 488 dhpv~~d 494 (547)
+|+++.|
T Consensus 585 ~HfIl~d 591 (759)
T 2zuv_A 585 DHFITAD 591 (759)
T ss_dssp SCTTTTT
T ss_pred CCceecc
Confidence 7999886
No 42
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=23.03 E-value=76 Score=28.47 Aligned_cols=55 Identities=16% Similarity=0.336 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCC--------eEEeechhhhhhhhccCCC
Q 008963 383 NENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSD--------VMVGVHGAAMTHFLFMKPG 439 (547)
Q Consensus 383 Ne~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aD--------VlVGvHGAGLTN~lFmppg 439 (547)
..+.|.+.++++||+|.+.+-.....+.+.++-++.-| ++|--||- -+.++...|
T Consensus 42 D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~--~g~i~g~D~ 104 (146)
T 2dko_A 42 DAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGE--EGIIFGTNG 104 (146)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSCCTTEEEEEEEEESCEE--TTEEEETTE
T ss_pred HHHHHHHHHHHCCCEEEEeeCCCHHHHHHHHHHHHHhhcCCCCeEEEEeccCCC--CCEEEEeCC
Confidence 34467788899999999875211223344444444444 45555765 244444433
No 43
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=22.99 E-value=56 Score=29.72 Aligned_cols=67 Identities=12% Similarity=0.137 Sum_probs=44.4
Q ss_pred CCCCEEEEEecCC-----CccccCHHHHHHHHHHcCCEEEEE--ecCCCCCHHHHHHHH-h-cCCeEEeechhhhhh
Q 008963 365 SKKPKLVILSRNG-----SRAITNENSLVKMAEDIGFQVQVV--RPDRTSELAKIYRAL-N-SSDVMVGVHGAAMTH 432 (547)
Q Consensus 365 ~~rprlliIsR~~-----sR~IlNe~Evv~~lk~~GfeV~v~--e~~~~~s~~eQi~l~-~-~aDVlVGvHGAGLTN 432 (547)
-++||+.+|+=.. ...=.|-.-+.+.+++.|++++.. -+++ -.+.+.++.. . .+|++|.-=|.|.+-
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3578888876543 244456667889999999987532 2444 5566666544 3 799999998888764
No 44
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=22.80 E-value=5.5e+02 Score=25.63 Aligned_cols=132 Identities=15% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCEEEEEecCCCCC--------HHHHHHHHhcCCeEEeech-hhhhhhhc-------cCCCcEEEEEecCC
Q 008963 386 SLVKMAEDIGFQVQVVRPDRTSE--------LAKIYRALNSSDVMVGVHG-AAMTHFLF-------MKPGSVFIQVIPLG 449 (547)
Q Consensus 386 Evv~~lk~~GfeV~v~e~~~~~s--------~~eQi~l~~~aDVlVGvHG-AGLTN~lF-------mppga~vIEI~P~g 449 (547)
++++.++.+|++|...+...... ..+.-+++.+||+++-.=- ..-|.-++ |+||+.+|-+---+
T Consensus 151 ~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 230 (324)
T 3evt_A 151 SLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGP 230 (324)
T ss_dssp HHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGG
T ss_pred HHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCCh
Q ss_pred CCccccchHHHHHhhcCCeEEEEEecCCCCcccccCCCCCCccCCCCcc---cccCcceeeeeecCCccEEEehHHHHHH
Q 008963 450 TDWAAETYYGEPARKLGLKYIGYTILPRESSLYDQYDKNDPVLRDPSSV---NEKGWQYTKTIYLDGQNVRLNLRRFQKR 526 (547)
Q Consensus 450 ~~~~~~~~Y~~lA~~~Gl~Y~~y~i~~eEssL~~~y~~dhpv~~dP~~i---~~kgW~~~~~~YL~~QnV~lDi~rF~~~ 526 (547)
-....--...-+.-++......+..+|-- +.+||.+.-|..+ |-.|+.. +...++
T Consensus 231 --~vd~~aL~~aL~~g~i~gA~lDV~~~EPl-----~~~~pL~~~~nvilTPHia~~t~---------------~~~~~~ 288 (324)
T 3evt_A 231 --AVDTTALMTALDHHQLSMAALDVTEPEPL-----PTDHPLWQRDDVLITPHISGQIA---------------HFRATV 288 (324)
T ss_dssp --GBCHHHHHHHHHTTSCSEEEESSCSSSSC-----CTTCGGGGCSSEEECCSCTTCCC---------------CHHHHH
T ss_pred --hhhHHHHHHHHHhCCceEEEeCCCCCCCC-----CCCChhhcCCCEEEcCccccChH---------------HHHHHH
Q ss_pred HHHHHHHHHhhcc
Q 008963 527 LVRAYDYSINRIS 539 (547)
Q Consensus 527 L~~A~~~l~~~~~ 539 (547)
...+.+.+.+.++
T Consensus 289 ~~~~~~nl~~~l~ 301 (324)
T 3evt_A 289 FPIFAANFAQFVK 301 (324)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
No 45
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=22.37 E-value=94 Score=28.43 Aligned_cols=55 Identities=15% Similarity=0.292 Sum_probs=31.9
Q ss_pred CHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCC--------eEEeechhhhhhhhccCCC
Q 008963 383 NENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSD--------VMVGVHGAAMTHFLFMKPG 439 (547)
Q Consensus 383 Ne~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aD--------VlVGvHGAGLTN~lFmppg 439 (547)
..+.|.+.++++||+|.+.+-.....+.+.++-++.-| ++|--||-- +.++...|
T Consensus 56 D~~~L~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~dh~~~dc~vv~ilSHG~~--g~i~g~D~ 118 (164)
T 1qtn_A 56 DAGALTTTFEELHFEIKPHDDCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDK--GIIYGTDG 118 (164)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHSCCTTCSCEEEEEESCEET--TEEECTTS
T ss_pred HHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHHhhccCCCEEEEEeCCCCCC--CEEEeeCC
Confidence 34457788899999998875222223444444444444 455567752 55555544
No 46
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=21.60 E-value=2e+02 Score=28.97 Aligned_cols=94 Identities=18% Similarity=0.211 Sum_probs=58.1
Q ss_pred CccccCHHHHHHHHHHcCCEEEEEecCC----CCCHHHHHH----------HHhcCCeEEeechhhhhhhhccCCCcEEE
Q 008963 378 SRAITNENSLVKMAEDIGFQVQVVRPDR----TSELAKIYR----------ALNSSDVMVGVHGAAMTHFLFMKPGSVFI 443 (547)
Q Consensus 378 sR~IlNe~Evv~~lk~~GfeV~v~e~~~----~~s~~eQi~----------l~~~aDVlVGvHGAGLTN~lFmppga~vI 443 (547)
.||+-=-.+.++.|.+.|++|.+ |... ..+=.|-.+ ++ +||+||++-----...-.+++|..+|
T Consensus 13 e~Rv~l~P~~v~~L~~~g~~v~v-e~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~vk~p~~~~~~~l~~~~~~~ 90 (369)
T 2eez_A 13 ENRVALTPGGVESLVRRGHTVLV-ERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVKVKEPLPEEYGFLREGLILF 90 (369)
T ss_dssp CCCCSSCHHHHHHHHHTTCEEEE-ETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEECSSCCCGGGGGGCCTTCEEE
T ss_pred CceeCcCHHHHHHHHhCCCEEEE-eCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEEECCCCHHHHhhcCCCcEEE
Confidence 35665556677788889999965 3221 233222222 55 89999988754444456678998887
Q ss_pred EEecCCCCccccchHHHHHhhcCCeEEEEEecCC
Q 008963 444 QVIPLGTDWAAETYYGEPARKLGLKYIGYTILPR 477 (547)
Q Consensus 444 EI~P~g~~~~~~~~Y~~lA~~~Gl~Y~~y~i~~e 477 (547)
=..-.+ .....-......|+..+.|...+.
T Consensus 91 ~~~~~~----~~~~~~~~l~~~gi~~ia~e~~~~ 120 (369)
T 2eez_A 91 TYLHLA----ADRGLTEAMLRSGVTGIAYETVQL 120 (369)
T ss_dssp ECCCGG----GCHHHHHHHHHHTCEEEEGGGCCC
T ss_pred EEeccc----CCHHHHHHHHHCCCeEEEeecccc
Confidence 665443 223344455678899987765443
No 47
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=21.20 E-value=85 Score=30.46 Aligned_cols=55 Identities=16% Similarity=0.336 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCC--------eEEeechhhhhhhhccCCC
Q 008963 383 NENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSD--------VMVGVHGAAMTHFLFMKPG 439 (547)
Q Consensus 383 Ne~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aD--------VlVGvHGAGLTN~lFmppg 439 (547)
..+.|.+.++++||+|.+.+-.....+.+.++-+..-| +++.-||- -+.++...+
T Consensus 42 D~~~l~~~f~~LgF~V~~~~dlt~~em~~~l~~~~~~~~~~~d~~v~~~lsHG~--~g~i~~~D~ 104 (250)
T 2j32_A 42 DAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDHSKRSSFVCVLLSHGE--EGIIFGTNG 104 (250)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEE--TTEEEETTE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhhccCCCEEEEEECCCCC--CCeEEecCC
Confidence 44568899999999999876322234444455554443 34555875 345554443
No 48
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=20.97 E-value=71 Score=29.68 Aligned_cols=55 Identities=20% Similarity=0.411 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCC--------eEEeechhhhhhhhccCCC
Q 008963 383 NENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSD--------VMVGVHGAAMTHFLFMKPG 439 (547)
Q Consensus 383 Ne~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aD--------VlVGvHGAGLTN~lFmppg 439 (547)
..+.|.+.++++||+|.+.+-.....+.+.++-+++-| |+|--||-- +.|+...|
T Consensus 70 D~~~L~~~F~~LgF~V~v~~dlt~~em~~~l~~~s~~dh~~~dc~vvvilSHG~~--g~I~g~D~ 132 (173)
T 2ql9_A 70 DAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACILLSHGEE--NVIYGKDG 132 (173)
T ss_dssp HHHHHHHHHHHHTEEEEEEESCCHHHHHHHHHHHHTSCCTTEEEEEEEEESCEET--TEEEETTE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHhhccCCCeEEEeecCCCCC--CEEEEcCC
Confidence 34567888899999998875222223444455555555 566667753 45555444
No 49
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=20.92 E-value=62 Score=26.04 Aligned_cols=21 Identities=29% Similarity=0.321 Sum_probs=18.6
Q ss_pred ccccCHHHHHHHHHHcCCEEE
Q 008963 379 RAITNENSLVKMAEDIGFQVQ 399 (547)
Q Consensus 379 R~IlNe~Evv~~lk~~GfeV~ 399 (547)
++=+|.+++++.|++.||+|+
T Consensus 58 ~~gid~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 58 LAGTPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp HHTCCHHHHHHHHHHTTCEEE
T ss_pred HcCCCHHHHHHHHHHcCCEee
Confidence 555799999999999999986
No 50
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=20.74 E-value=93 Score=29.06 Aligned_cols=71 Identities=13% Similarity=0.184 Sum_probs=47.9
Q ss_pred CCCCCCEEEEEecCCC----ccccCHHHHHHHHHHcCCEEEEEe--cCCCCCHHHHHHHH--hcCCeEEeechhhhhhh
Q 008963 363 DQSKKPKLVILSRNGS----RAITNENSLVKMAEDIGFQVQVVR--PDRTSELAKIYRAL--NSSDVMVGVHGAAMTHF 433 (547)
Q Consensus 363 ~~~~rprlliIsR~~s----R~IlNe~Evv~~lk~~GfeV~v~e--~~~~~s~~eQi~l~--~~aDVlVGvHGAGLTN~ 433 (547)
...++||+.||+=... +.=.|-.-+.+.+++.|++++... +++.-.+.+.++.. .++|++|.-=|.|.+.-
T Consensus 26 ~~~~~~rvaIistGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~ 104 (185)
T 3rfq_A 26 AELVVGRALVVVVDDRTAHGDEDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPR 104 (185)
T ss_dssp ---CCEEEEEEEECHHHHTTCCCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTT
T ss_pred cCCCCCEEEEEEECcccCCCCcCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCc
Confidence 3457899988875431 144577788899999999886533 33334466666544 57999999999987653
No 51
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=20.74 E-value=55 Score=35.35 Aligned_cols=101 Identities=16% Similarity=0.239 Sum_probs=70.7
Q ss_pred CCCEEEEEecCC--CccccCHHHHHHHHHHcCCEEEEEecCCCCCHHHHHHHHhcCCeEEeech-hhhhhhhccCC--Cc
Q 008963 366 KKPKLVILSRNG--SRAITNENSLVKMAEDIGFQVQVVRPDRTSELAKIYRALNSSDVMVGVHG-AAMTHFLFMKP--GS 440 (547)
Q Consensus 366 ~rprlliIsR~~--sR~IlNe~Evv~~lk~~GfeV~v~e~~~~~s~~eQi~l~~~aDVlVGvHG-AGLTN~lFmpp--ga 440 (547)
.+++|-||.=.. ...--|..|+.+.|++.|.+|+.+-+ ...+++ +++-+.+|++-|.++- +|..-.-+|.. |.
T Consensus 152 ~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~p-gg~t~~-ei~~~~~A~~niv~~~~~g~~~A~~Le~r~Gi 229 (525)
T 3aek_B 152 PEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAP-LGASPD-DLRKLGQAHFNVLMYPETGESAARHLERACKQ 229 (525)
T ss_dssp SSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEE-TTCCHH-HHHTGGGSSEEEECCHHHHHHHHHHHHHHSCC
T ss_pred CCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeC-CCCCHH-HHHhhccCCEEEEEChhhHHHHHHHHHHHcCC
Confidence 456777775332 12234667899999999999988655 345665 5677888998888773 45555555543 56
Q ss_pred EEEEEecCCCCccccchHHHHHhhcCCeE
Q 008963 441 VFIQVIPLGTDWAAETYYGEPARKLGLKY 469 (547)
Q Consensus 441 ~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~Y 469 (547)
-.++..|+|.+- ...|++.+|+..|...
T Consensus 230 P~i~~~PiG~~~-T~~~Lr~ia~~~g~~~ 257 (525)
T 3aek_B 230 PFTKIVPIGVGA-TRDFLAEVSKITGLPV 257 (525)
T ss_dssp CBCCCCCCSHHH-HHHHHHHHHHHHCCCC
T ss_pred CceecCCcCHHH-HHHHHHHHHHHHCCCH
Confidence 666678999643 4578999999999875
No 52
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=20.59 E-value=1.3e+02 Score=31.58 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=24.3
Q ss_pred HHHHHhcCCeEEeechh-h------hhhhhc--cCCCcEEEEEe
Q 008963 412 IYRALNSSDVMVGVHGA-A------MTHFLF--MKPGSVFIQVI 446 (547)
Q Consensus 412 Qi~l~~~aDVlVGvHGA-G------LTN~lF--mppga~vIEI~ 446 (547)
..+.+..|||+|+..+. | +|.-+. |+||++||-+-
T Consensus 269 l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 35567899999987531 1 233222 89999999985
No 53
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=20.26 E-value=2.7e+02 Score=27.11 Aligned_cols=48 Identities=19% Similarity=0.113 Sum_probs=35.5
Q ss_pred hcCCeEEeechhhhhhh------hccCCCcEEEEEecCCCCccccchHHHHHhhcCCe
Q 008963 417 NSSDVMVGVHGAAMTHF------LFMKPGSVFIQVIPLGTDWAAETYYGEPARKLGLK 468 (547)
Q Consensus 417 ~~aDVlVGvHGAGLTN~------lFmppga~vIEI~P~g~~~~~~~~Y~~lA~~~Gl~ 468 (547)
..+|++|..-.+|+..- =+++++++|+.++-.. ..+.+-..|+..|++
T Consensus 180 ~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P----~~T~ll~~A~~~G~~ 233 (272)
T 3pwz_A 180 QSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGK----GLTPFLRLAREQGQA 233 (272)
T ss_dssp CCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSC----CSCHHHHHHHHHSCC
T ss_pred cCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCC----CCCHHHHHHHHCCCC
Confidence 67999999888887532 2467889999986321 245588889999987
No 54
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=20.02 E-value=1.3e+02 Score=27.32 Aligned_cols=40 Identities=10% Similarity=0.163 Sum_probs=27.4
Q ss_pred HHHHHHHHHHcCCEEEEEecCCCC-C-----HHHHHHHHhcCCeEEee
Q 008963 384 ENSLVKMAEDIGFQVQVVRPDRTS-E-----LAKIYRALNSSDVMVGV 425 (547)
Q Consensus 384 e~Evv~~lk~~GfeV~v~e~~~~~-s-----~~eQi~l~~~aDVlVGv 425 (547)
.+++.+.|++.|++|.. |..+. + +..=++.+.+||++|+.
T Consensus 29 ~~~l~~~l~~~G~~v~~--P~~~~~~~~~~i~~~d~~~i~~aD~vVA~ 74 (161)
T 2f62_A 29 YNKVRELLKKENVMPLI--PTDNEATEALDIRQKNIQMIKDCDAVIAD 74 (161)
T ss_dssp HHHHHHHHHTTTCEEEC--TTTTCCSSHHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHCCCEEEC--CCccCcchHHHHHHHHHHHHHhCCEEEEE
Confidence 35788889999998653 43221 1 33336889999999876
Done!