Query 008975
Match_columns 547
No_of_seqs 322 out of 1954
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 18:52:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008975.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008975hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-122 3E-127 998.0 41.5 511 36-547 1-511 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 3E-119 6E-124 974.2 46.7 497 46-543 17-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 9E-117 2E-121 954.7 45.7 496 45-541 5-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 1E-109 2E-114 894.7 39.2 469 72-541 2-476 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 4E-100 9E-105 812.3 37.0 430 112-541 34-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.1E-78 2.5E-83 611.0 24.5 290 130-419 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 5.1E-54 1.1E-58 442.4 23.8 311 136-518 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 8.1E-51 1.8E-55 432.7 31.6 349 136-518 15-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 6.7E-51 1.4E-55 429.0 30.4 344 138-515 2-361 (361)
10 PLN03168 chalcone synthase; Pr 100.0 1E-49 2.2E-54 424.1 30.3 349 136-520 14-388 (389)
11 PLN03169 chalcone synthase fam 100.0 1.3E-49 2.7E-54 423.9 29.5 354 131-518 15-389 (391)
12 PLN03173 chalcone synthase; Pr 100.0 2.5E-49 5.4E-54 421.0 28.7 351 136-520 15-389 (391)
13 PLN03170 chalcone synthase; Pr 100.0 1.8E-48 3.8E-53 415.9 28.0 351 136-520 19-393 (401)
14 PLN03171 chalcone synthase-lik 100.0 4.8E-48 1E-52 412.6 30.2 350 135-520 20-397 (399)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 9.1E-47 2E-51 391.8 28.7 322 137-517 3-326 (326)
16 COG3424 BcsA Predicted naringe 100.0 4.8E-47 1.1E-51 377.6 24.8 346 138-519 2-354 (356)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 1.4E-45 3E-50 388.0 29.1 335 134-521 4-342 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.5E-45 3.2E-50 391.3 29.0 332 136-517 46-379 (379)
19 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 1.1E-44 2.4E-49 376.7 27.0 321 137-517 2-325 (326)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 3.6E-44 7.9E-49 371.5 30.5 321 136-517 3-324 (325)
21 PRK07204 3-oxoacyl-(acyl carri 100.0 3.2E-44 6.9E-49 373.2 29.6 325 136-517 3-329 (329)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 6.4E-44 1.4E-48 372.1 27.3 320 135-517 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 4.6E-43 9.9E-48 366.2 30.3 328 135-518 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 8.2E-43 1.8E-47 359.8 27.2 319 137-515 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.7E-42 3.6E-47 358.3 28.8 316 137-517 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 4.8E-41 1E-45 347.3 29.8 316 136-517 2-318 (319)
27 PRK04262 hypothetical protein; 100.0 3.4E-41 7.3E-46 353.9 26.8 311 137-522 2-313 (347)
28 PRK06816 3-oxoacyl-(acyl carri 100.0 1.7E-40 3.7E-45 352.5 31.3 346 137-518 2-378 (378)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.3E-40 2.9E-45 349.3 24.6 319 138-535 2-322 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 1.7E-39 3.7E-44 343.9 28.2 349 136-517 1-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 1.8E-38 3.8E-43 328.1 24.0 321 137-515 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 7.7E-35 1.7E-39 309.3 27.9 308 138-520 1-320 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 7.8E-33 1.7E-37 298.2 26.2 312 134-520 1-373 (459)
34 PF00195 Chal_sti_synt_N: Chal 100.0 3.7E-31 8.1E-36 260.3 17.0 203 132-336 9-226 (226)
35 COG3425 PksG 3-hydroxy-3-methy 100.0 3.2E-30 6.9E-35 267.5 24.3 313 137-522 2-315 (377)
36 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 3.7E-30 8.1E-35 277.2 23.9 312 137-520 1-376 (454)
37 cd00327 cond_enzymes Condensin 100.0 1.4E-27 3.1E-32 237.7 17.2 235 212-515 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 6.9E-25 1.5E-29 227.0 15.1 252 212-515 11-332 (332)
39 PF01154 HMG_CoA_synt_N: Hydro 99.8 1.1E-18 2.5E-23 164.6 12.3 168 134-336 1-173 (174)
40 PF02797 Chal_sti_synt_C: Chal 99.8 1.3E-18 2.8E-23 162.3 12.5 120 372-518 24-150 (151)
41 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 4.3E-19 9.4E-24 150.9 8.1 83 432-517 8-90 (90)
42 KOG1393 Hydroxymethylglutaryl- 99.7 1.8E-15 3.8E-20 155.4 20.5 318 134-522 8-381 (462)
43 PRK06147 3-oxoacyl-(acyl carri 99.6 4.5E-15 9.8E-20 156.4 17.6 256 211-518 64-343 (348)
44 TIGR02845 spore_V_AD stage V s 99.6 8.3E-15 1.8E-19 150.6 14.4 115 213-337 51-173 (327)
45 PRK08304 stage V sporulation p 99.5 3E-13 6.6E-18 139.4 18.1 115 214-337 58-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 2.1E-12 4.5E-17 137.9 21.7 184 136-337 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 3.5E-12 7.5E-17 136.3 19.8 93 212-305 22-115 (386)
48 smart00825 PKS_KS Beta-ketoacy 99.4 3.5E-11 7.6E-16 129.5 23.0 120 212-336 87-246 (424)
49 PF08545 ACP_syn_III: 3-Oxoacy 99.4 1.2E-12 2.6E-17 109.3 7.2 79 267-357 1-79 (80)
50 PRK09051 beta-ketothiolase; Pr 99.4 5.9E-11 1.3E-15 127.3 21.8 93 213-306 28-122 (394)
51 PRK05656 acetyl-CoA acetyltran 99.4 6.4E-11 1.4E-15 127.0 21.5 93 213-306 27-120 (393)
52 TIGR01930 AcCoA-C-Actrans acet 99.4 3.3E-11 7.2E-16 128.8 19.0 94 212-306 21-115 (386)
53 PRK06064 acetyl-CoA acetyltran 99.3 1E-10 2.2E-15 125.1 22.1 91 213-305 23-116 (389)
54 cd00829 SCP-x_thiolase Thiolas 99.3 1.7E-10 3.8E-15 122.3 21.6 93 212-306 16-109 (375)
55 PRK08313 acetyl-CoA acetyltran 99.3 4E-10 8.6E-15 120.6 24.4 91 213-305 25-117 (386)
56 PRK09052 acetyl-CoA acetyltran 99.3 1.7E-10 3.8E-15 123.9 21.0 93 213-306 32-127 (399)
57 PRK12578 acetyl-CoA acetyltran 99.3 4.4E-10 9.6E-15 120.1 22.5 91 213-305 22-113 (385)
58 cd00828 elong_cond_enzymes "el 99.3 4E-10 8.7E-15 120.8 21.6 123 211-337 71-243 (407)
59 PRK06501 3-oxoacyl-(acyl carri 99.3 1.8E-09 3.9E-14 117.0 25.8 179 137-336 12-256 (425)
60 TIGR03150 fabF beta-ketoacyl-a 99.2 8.1E-10 1.8E-14 118.2 22.2 120 212-336 71-242 (407)
61 cd00833 PKS polyketide synthas 99.2 1.4E-09 3.1E-14 116.6 23.5 120 211-337 86-247 (421)
62 PRK05790 putative acyltransfer 99.2 1.5E-09 3.2E-14 116.4 21.3 92 213-305 27-119 (393)
63 PRK06025 acetyl-CoA acetyltran 99.2 2.1E-09 4.5E-14 115.7 21.2 94 212-306 29-124 (417)
64 PRK06445 acetyl-CoA acetyltran 99.2 1.8E-09 3.8E-14 116.0 20.1 90 213-305 33-126 (394)
65 PRK07314 3-oxoacyl-(acyl carri 99.2 5.7E-09 1.2E-13 112.2 24.0 183 136-336 2-243 (411)
66 PRK12404 stage V sporulation p 99.1 2.3E-09 5E-14 110.4 17.9 115 213-336 55-176 (334)
67 PRK07661 acetyl-CoA acetyltran 99.1 4.1E-09 8.9E-14 113.0 20.2 93 213-306 28-122 (391)
68 PRK06158 thiolase; Provisional 99.1 8.2E-09 1.8E-13 110.5 21.2 86 213-303 29-115 (384)
69 PRK07103 polyketide beta-ketoa 99.1 1.4E-08 3E-13 109.6 22.9 119 212-337 80-251 (410)
70 PRK06333 3-oxoacyl-(acyl carri 99.1 1.6E-08 3.4E-13 109.4 23.1 119 211-336 81-255 (424)
71 PRK06690 acetyl-CoA acetyltran 99.1 1.5E-08 3.2E-13 107.7 21.6 90 212-306 25-114 (361)
72 PRK08256 lipid-transfer protei 99.0 1.9E-08 4.1E-13 107.9 21.5 88 213-305 23-111 (391)
73 PRK08722 3-oxoacyl-(acyl carri 99.0 4.7E-08 1E-12 105.7 24.7 119 212-337 74-246 (414)
74 PRK08439 3-oxoacyl-(acyl carri 99.0 3E-08 6.4E-13 106.9 23.0 119 211-336 71-243 (406)
75 PRK07108 acetyl-CoA acetyltran 99.0 1.1E-09 2.4E-14 117.5 10.6 94 212-306 27-122 (392)
76 PLN02644 acetyl-CoA C-acetyltr 99.0 3.8E-08 8.3E-13 105.7 22.3 92 213-305 26-118 (394)
77 PRK06205 acetyl-CoA acetyltran 99.0 1.2E-09 2.6E-14 117.6 10.2 93 213-306 27-120 (404)
78 PRK08235 acetyl-CoA acetyltran 99.0 1.6E-09 3.5E-14 116.2 10.6 93 213-306 27-120 (393)
79 PRK08242 acetyl-CoA acetyltran 99.0 2.3E-09 5E-14 115.3 11.0 94 212-306 28-123 (402)
80 PRK06059 lipid-transfer protei 98.9 3E-09 6.4E-14 114.3 10.1 92 213-306 24-117 (399)
81 PRK09116 3-oxoacyl-(acyl carri 98.9 8.4E-08 1.8E-12 103.4 20.6 187 136-336 2-244 (405)
82 PRK05952 3-oxoacyl-(acyl carri 98.9 1.3E-07 2.8E-12 101.2 21.3 299 136-516 2-380 (381)
83 PRK08170 acetyl-CoA acetyltran 98.9 6E-09 1.3E-13 113.0 10.8 93 213-306 28-121 (426)
84 cd00826 nondecarbox_cond_enzym 98.9 8E-09 1.7E-13 110.9 10.5 93 212-306 23-117 (393)
85 PRK07801 acetyl-CoA acetyltran 98.9 1.3E-07 2.8E-12 101.2 19.3 92 213-305 27-120 (382)
86 PRK09185 3-oxoacyl-(acyl carri 98.9 1.4E-06 3E-11 93.6 26.9 206 248-517 137-390 (392)
87 PRK06954 acetyl-CoA acetyltran 98.9 9.5E-09 2.1E-13 110.5 10.2 93 213-306 32-125 (397)
88 PLN02836 3-oxoacyl-[acyl-carri 98.8 5.6E-07 1.2E-11 98.0 23.9 118 212-336 93-266 (437)
89 PLN02787 3-oxoacyl-[acyl-carri 98.8 4.6E-07 9.9E-12 100.9 23.0 117 212-336 199-372 (540)
90 cd00832 CLF Chain-length facto 98.8 7.5E-07 1.6E-11 95.9 23.4 117 212-337 71-241 (399)
91 PF00108 Thiolase_N: Thiolase, 98.8 1.9E-08 4E-13 102.5 10.1 95 212-307 26-121 (264)
92 PRK07967 3-oxoacyl-(acyl carri 98.8 1.7E-06 3.7E-11 93.4 25.3 311 136-518 2-404 (406)
93 PTZ00050 3-oxoacyl-acyl carrie 98.8 6E-07 1.3E-11 97.2 21.9 251 212-517 77-420 (421)
94 PRK06065 acetyl-CoA acetyltran 98.8 1.9E-08 4.2E-13 107.9 10.1 90 213-304 30-121 (392)
95 PRK07910 3-oxoacyl-(acyl carri 98.8 2.1E-06 4.6E-11 93.0 25.0 314 136-517 12-417 (418)
96 PRK08257 acetyl-CoA acetyltran 98.7 9.5E-07 2.1E-11 97.7 20.9 91 213-305 28-120 (498)
97 PRK13359 beta-ketoadipyl CoA t 98.7 8E-08 1.7E-12 103.4 10.9 94 212-306 26-122 (400)
98 PRK08963 fadI 3-ketoacyl-CoA t 98.7 6.5E-08 1.4E-12 105.1 9.8 94 212-306 29-123 (428)
99 PLN02287 3-ketoacyl-CoA thiola 98.7 9.3E-08 2E-12 104.4 10.7 93 213-306 72-166 (452)
100 PRK07851 acetyl-CoA acetyltran 98.7 1.1E-07 2.3E-12 102.7 10.8 92 213-306 28-122 (406)
101 PRK07516 acetyl-CoA acetyltran 98.6 1.1E-07 2.3E-12 102.0 10.3 91 213-305 23-116 (389)
102 PF00109 ketoacyl-synt: Beta-k 98.6 9.9E-08 2.1E-12 95.4 9.4 120 211-335 86-251 (254)
103 PRK09050 beta-ketoadipyl CoA t 98.6 1.2E-07 2.6E-12 102.1 10.2 94 212-306 26-122 (401)
104 PRK07850 acetyl-CoA acetyltran 98.6 1.5E-07 3.2E-12 101.0 10.5 94 212-306 26-121 (387)
105 PRK06633 acetyl-CoA acetyltran 98.6 9.8E-08 2.1E-12 102.5 8.8 94 212-306 27-121 (392)
106 PRK06289 acetyl-CoA acetyltran 98.6 1.4E-07 3E-12 101.6 9.9 90 213-306 27-122 (403)
107 PRK08131 acetyl-CoA acetyltran 98.6 2E-07 4.3E-12 100.5 10.7 94 212-306 26-121 (401)
108 TIGR02430 pcaF beta-ketoadipyl 98.6 1.8E-07 3.8E-12 100.8 10.3 94 212-306 25-121 (400)
109 PRK06366 acetyl-CoA acetyltran 98.6 2.2E-07 4.9E-12 99.6 10.5 94 212-306 26-120 (388)
110 TIGR02446 FadI fatty oxidation 98.6 2E-07 4.3E-12 101.3 9.5 94 212-306 31-125 (430)
111 PRK14691 3-oxoacyl-(acyl carri 98.6 5.1E-06 1.1E-10 87.8 19.6 119 212-337 4-174 (342)
112 PRK06504 acetyl-CoA acetyltran 98.5 4.1E-07 8.9E-12 97.7 10.7 94 212-306 26-121 (390)
113 PRK06157 acetyl-CoA acetyltran 98.5 5.2E-07 1.1E-11 97.1 10.7 92 213-306 28-120 (398)
114 PRK08947 fadA 3-ketoacyl-CoA t 98.5 4.3E-07 9.4E-12 97.4 9.8 94 212-306 27-123 (387)
115 PRK06519 3-oxoacyl-(acyl carri 98.5 8.3E-06 1.8E-10 87.9 19.3 183 135-337 5-255 (398)
116 TIGR02813 omega_3_PfaA polyket 98.5 2.1E-05 4.5E-10 100.7 25.4 254 211-519 92-463 (2582)
117 PTZ00455 3-ketoacyl-CoA thiola 98.5 8.2E-07 1.8E-11 96.7 11.0 93 213-306 49-152 (438)
118 PRK06066 acetyl-CoA acetyltran 98.4 4.1E-05 8.8E-10 82.2 23.0 88 213-305 26-116 (385)
119 PRK06365 acetyl-CoA acetyltran 98.4 8.5E-07 1.9E-11 96.4 10.2 91 213-305 38-130 (430)
120 TIGR02445 fadA fatty oxidation 98.4 6.6E-07 1.4E-11 96.0 8.6 94 212-306 25-121 (385)
121 PRK09268 acetyl-CoA acetyltran 98.4 1.6E-06 3.5E-11 94.2 10.6 93 213-306 32-125 (427)
122 PF07451 SpoVAD: Stage V sporu 98.2 2.8E-05 6.2E-10 79.5 15.1 116 214-338 53-175 (329)
123 PRK07937 lipid-transfer protei 98.2 0.00017 3.7E-09 76.6 21.0 87 214-305 26-114 (352)
124 COG0304 FabB 3-oxoacyl-(acyl-c 98.1 0.00022 4.8E-09 77.1 19.4 120 211-337 70-244 (412)
125 PRK08142 acetyl-CoA acetyltran 98.0 1.8E-05 3.9E-10 85.1 9.5 87 213-304 26-112 (388)
126 PRK07855 lipid-transfer protei 97.9 4.6E-05 1E-09 81.8 9.8 83 214-301 26-108 (386)
127 COG3321 Polyketide synthase mo 97.8 0.00056 1.2E-08 82.2 16.7 192 136-336 4-250 (1061)
128 KOG1389 3-oxoacyl CoA thiolase 97.7 0.00054 1.2E-08 70.2 13.0 92 214-307 63-156 (435)
129 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00026 5.7E-09 76.3 9.2 94 213-307 28-125 (392)
130 KOG1390 Acetyl-CoA acetyltrans 97.4 0.00041 8.8E-09 71.4 7.3 94 212-306 30-124 (396)
131 PF08540 HMG_CoA_synt_C: Hydro 96.9 0.00076 1.7E-08 69.4 3.5 62 461-522 143-206 (282)
132 KOG1394 3-oxoacyl-(acyl-carrie 96.6 0.015 3.4E-07 60.9 10.5 119 211-336 93-268 (440)
133 KOG1406 Peroxisomal 3-ketoacyl 96.5 0.0038 8.3E-08 62.8 5.1 85 217-306 34-119 (408)
134 KOG1391 Acetyl-CoA acetyltrans 95.1 0.038 8.3E-07 55.7 5.6 92 212-306 28-123 (396)
135 PF08541 ACP_syn_III_C: 3-Oxoa 94.1 0.049 1.1E-06 45.9 3.3 76 224-303 1-79 (90)
136 TIGR00748 HMG_CoA_syn_Arc hydr 93.5 0.24 5.3E-06 52.4 7.9 71 212-286 206-281 (345)
137 PRK06025 acetyl-CoA acetyltran 93.4 0.21 4.5E-06 54.4 7.5 91 217-334 318-416 (417)
138 PRK06816 3-oxoacyl-(acyl carri 93.3 0.37 7.9E-06 51.7 9.1 89 211-303 269-365 (378)
139 PRK09258 3-oxoacyl-(acyl carri 92.5 0.38 8.1E-06 50.3 7.7 92 208-303 233-327 (338)
140 PRK05963 3-oxoacyl-(acyl carri 92.3 0.31 6.7E-06 50.8 6.7 89 209-301 222-313 (326)
141 cd00825 decarbox_cond_enzymes 91.6 0.58 1.3E-05 48.4 7.8 77 215-291 206-286 (332)
142 PRK07204 3-oxoacyl-(acyl carri 91.5 0.44 9.5E-06 49.7 6.7 84 210-300 226-315 (329)
143 KOG1392 Acetyl-CoA acetyltrans 91.0 0.2 4.4E-06 51.3 3.4 93 213-306 67-160 (465)
144 TIGR00747 fabH 3-oxoacyl-(acyl 90.9 0.68 1.5E-05 47.9 7.4 84 211-301 216-305 (318)
145 PRK12879 3-oxoacyl-(acyl carri 90.8 0.81 1.8E-05 47.5 7.9 84 211-301 222-311 (325)
146 PRK09352 3-oxoacyl-(acyl carri 90.8 0.54 1.2E-05 48.6 6.6 85 210-301 215-305 (319)
147 PRK04262 hypothetical protein; 90.2 0.6 1.3E-05 49.3 6.4 68 214-285 209-281 (347)
148 PLN02326 3-oxoacyl-[acyl-carri 89.6 0.84 1.8E-05 48.9 7.0 84 210-300 276-365 (379)
149 PRK06840 hypothetical protein; 89.5 1 2.2E-05 47.2 7.4 81 214-301 237-322 (339)
150 cd00327 cond_enzymes Condensin 89.5 1.2 2.7E-05 44.0 7.7 76 216-291 147-226 (254)
151 PRK13359 beta-ketoadipyl CoA t 89.0 1.3 2.9E-05 48.0 8.1 93 217-334 299-399 (400)
152 cd00830 KAS_III Ketoacyl-acyl 89.0 1.1 2.4E-05 46.1 7.2 85 210-301 219-309 (320)
153 PRK09050 beta-ketoadipyl CoA t 88.8 1.4 3.1E-05 47.7 8.1 69 217-289 300-376 (401)
154 PRK07515 3-oxoacyl-(acyl carri 88.6 1.2 2.6E-05 47.5 7.3 86 210-301 267-358 (372)
155 CHL00203 fabH 3-oxoacyl-acyl-c 88.2 1.3 2.7E-05 46.3 7.0 81 214-301 226-312 (326)
156 PF13723 Ketoacyl-synt_2: Beta 87.5 12 0.00025 37.4 12.9 115 211-337 33-172 (218)
157 PRK06954 acetyl-CoA acetyltran 86.7 3.4 7.5E-05 44.7 9.5 84 432-517 312-396 (397)
158 TIGR02430 pcaF beta-ketoadipyl 86.7 1.7 3.7E-05 47.1 7.1 69 217-289 299-375 (400)
159 PRK06366 acetyl-CoA acetyltran 86.5 2.3 4.9E-05 45.9 7.9 74 217-297 288-369 (388)
160 COG3425 PksG 3-hydroxy-3-methy 85.5 2.9 6.3E-05 44.8 7.9 82 213-300 208-296 (377)
161 PRK06147 3-oxoacyl-(acyl carri 85.1 1.6 3.4E-05 46.3 5.8 87 216-302 236-330 (348)
162 PRK06504 acetyl-CoA acetyltran 84.9 8.1 0.00018 41.8 11.2 81 432-516 305-388 (390)
163 PF02803 Thiolase_C: Thiolase, 84.8 3.3 7.2E-05 37.6 6.9 69 217-291 25-101 (123)
164 PRK09052 acetyl-CoA acetyltran 83.9 3.2 7E-05 45.0 7.6 92 216-334 299-398 (399)
165 PRK05656 acetyl-CoA acetyltran 83.5 2.3 5.1E-05 45.9 6.4 49 217-271 294-342 (393)
166 cd00831 CHS_like Chalcone and 82.1 2.9 6.3E-05 44.3 6.4 88 210-301 255-350 (361)
167 PLN02287 3-ketoacyl-CoA thiola 82.0 10 0.00023 41.8 10.8 91 432-524 348-441 (452)
168 PRK06445 acetyl-CoA acetyltran 82.0 4.1 8.9E-05 44.0 7.5 67 216-288 294-368 (394)
169 PRK08242 acetyl-CoA acetyltran 81.9 8.2 0.00018 42.0 9.8 53 432-485 317-369 (402)
170 PRK09051 beta-ketothiolase; Pr 81.3 3.2 6.9E-05 44.9 6.4 49 217-271 295-343 (394)
171 PRK06690 acetyl-CoA acetyltran 81.2 6.2 0.00013 42.3 8.4 69 216-290 260-336 (361)
172 PRK07851 acetyl-CoA acetyltran 81.0 7.8 0.00017 42.1 9.3 85 432-518 320-405 (406)
173 PRK07850 acetyl-CoA acetyltran 79.7 17 0.00036 39.3 11.2 84 432-517 302-386 (387)
174 PRK07516 acetyl-CoA acetyltran 78.7 29 0.00062 37.3 12.6 57 432-489 277-351 (389)
175 PRK07108 acetyl-CoA acetyltran 78.5 9.1 0.0002 41.4 8.7 54 432-486 307-360 (392)
176 PRK08235 acetyl-CoA acetyltran 78.4 11 0.00024 40.8 9.3 84 432-517 308-392 (393)
177 COG0332 FabH 3-oxoacyl-[acyl-c 78.3 3.1 6.8E-05 43.9 5.0 55 207-265 216-270 (323)
178 PRK06205 acetyl-CoA acetyltran 78.3 14 0.00031 40.0 10.2 85 432-518 315-403 (404)
179 PRK06633 acetyl-CoA acetyltran 77.9 10 0.00022 41.1 8.8 81 432-517 307-391 (392)
180 PLN03169 chalcone synthase fam 77.8 5.6 0.00012 43.0 6.9 88 211-300 278-374 (391)
181 PRK07661 acetyl-CoA acetyltran 77.7 3.6 7.8E-05 44.5 5.3 92 216-334 291-390 (391)
182 PRK12880 3-oxoacyl-(acyl carri 77.4 4.5 9.8E-05 43.0 6.0 71 210-284 238-312 (353)
183 PRK08257 acetyl-CoA acetyltran 77.3 5.6 0.00012 44.5 6.9 79 217-300 295-382 (498)
184 cd00751 thiolase Thiolase are 77.0 7.4 0.00016 41.8 7.5 41 217-261 288-328 (386)
185 cd00827 init_cond_enzymes "ini 76.8 7.5 0.00016 40.0 7.3 92 208-303 217-315 (324)
186 COG1214 Inactive homolog of me 76.8 7.5 0.00016 38.7 6.9 58 214-271 39-97 (220)
187 PRK08947 fadA 3-ketoacyl-CoA t 75.4 25 0.00055 37.9 11.1 80 432-516 299-385 (387)
188 PRK07801 acetyl-CoA acetyltran 73.4 6.9 0.00015 42.0 6.1 67 217-289 283-357 (382)
189 TIGR01835 HMG-CoA-S_prok 3-hyd 72.0 8.3 0.00018 41.4 6.3 74 210-284 201-286 (379)
190 cd00829 SCP-x_thiolase Thiolas 71.8 11 0.00025 39.8 7.3 43 216-262 253-295 (375)
191 TIGR01930 AcCoA-C-Actrans acet 71.2 7.3 0.00016 41.9 5.7 49 217-271 289-337 (386)
192 PRK08963 fadI 3-ketoacyl-CoA t 71.1 29 0.00063 38.0 10.4 85 432-517 326-427 (428)
193 TIGR02445 fadA fatty oxidation 70.7 40 0.00088 36.3 11.3 82 432-517 297-384 (385)
194 PRK09185 3-oxoacyl-(acyl carri 70.0 16 0.00035 39.3 8.1 74 217-291 263-340 (392)
195 PF02801 Ketoacyl-synt_C: Beta 69.5 1.1 2.5E-05 39.7 -0.8 75 217-291 28-110 (119)
196 PRK05790 putative acyltransfer 69.3 8.6 0.00019 41.4 5.8 67 217-289 294-368 (393)
197 PRK09268 acetyl-CoA acetyltran 68.6 23 0.00051 38.7 9.0 25 216-240 311-335 (427)
198 PRK06059 lipid-transfer protei 67.5 83 0.0018 33.9 12.9 57 432-489 290-364 (399)
199 COG4126 Hydantoin racemase [Am 66.1 31 0.00068 34.5 8.3 100 171-291 119-218 (230)
200 PRK09604 UGMP family protein; 65.6 25 0.00055 37.1 8.3 48 213-260 52-104 (332)
201 cd00834 KAS_I_II Beta-ketoacyl 64.8 9.5 0.00021 40.7 5.0 76 216-291 277-358 (406)
202 PF00814 Peptidase_M22: Glycop 63.0 8.9 0.00019 39.3 4.1 58 208-270 26-88 (268)
203 PLN02644 acetyl-CoA C-acetyltr 62.4 14 0.0003 40.0 5.7 66 217-288 294-367 (394)
204 PRK08131 acetyl-CoA acetyltran 61.8 43 0.00094 36.4 9.4 81 432-517 313-399 (401)
205 PRK07314 3-oxoacyl-(acyl carri 61.6 12 0.00025 40.4 4.9 75 217-291 279-359 (411)
206 TIGR03725 bact_YeaZ universal 61.4 13 0.00029 36.2 4.9 36 213-248 34-69 (202)
207 COG0533 QRI7 Metal-dependent p 60.8 24 0.00053 37.5 6.9 90 208-304 47-138 (342)
208 PRK06064 acetyl-CoA acetyltran 60.7 23 0.0005 38.0 7.0 40 217-261 261-301 (389)
209 cd00826 nondecarbox_cond_enzym 60.4 20 0.00042 38.8 6.4 69 217-289 272-364 (393)
210 cd00828 elong_cond_enzymes "el 59.5 14 0.0003 39.6 5.1 76 216-291 276-357 (407)
211 TIGR03150 fabF beta-ketoacyl-a 59.4 16 0.00034 39.1 5.5 45 216-260 277-322 (407)
212 PF02803 Thiolase_C: Thiolase, 59.2 32 0.00069 31.2 6.6 83 432-516 39-122 (123)
213 PRK14878 UGMP family protein; 58.9 16 0.00035 38.4 5.3 52 208-260 41-97 (323)
214 PTZ00050 3-oxoacyl-acyl carrie 58.5 23 0.00051 38.5 6.7 76 216-291 285-368 (421)
215 PRK06519 3-oxoacyl-(acyl carri 58.4 26 0.00055 38.1 6.9 74 216-291 282-357 (398)
216 TIGR00329 gcp_kae1 metallohydr 58.4 30 0.00064 36.1 7.1 34 214-247 50-83 (305)
217 PRK08256 lipid-transfer protei 57.1 27 0.00058 37.6 6.7 42 217-262 267-308 (391)
218 KOG2708 Predicted metalloprote 55.7 39 0.00085 34.1 6.9 86 213-304 50-136 (336)
219 TIGR02446 FadI fatty oxidation 55.4 77 0.0017 34.8 10.0 18 319-336 265-282 (430)
220 PRK07855 lipid-transfer protei 55.0 32 0.0007 37.1 7.0 24 217-240 269-292 (386)
221 PRK14691 3-oxoacyl-(acyl carri 54.8 26 0.00056 37.2 6.1 45 216-260 208-253 (342)
222 PTZ00455 3-ketoacyl-CoA thiola 53.7 30 0.00065 38.1 6.5 42 217-262 312-353 (438)
223 PLN02787 3-oxoacyl-[acyl-carri 53.6 26 0.00056 39.7 6.1 75 217-291 408-487 (540)
224 cd00832 CLF Chain-length facto 52.9 22 0.00049 38.4 5.3 75 216-291 272-351 (399)
225 PRK06158 thiolase; Provisional 52.6 36 0.00079 36.6 6.9 41 217-261 257-297 (384)
226 PRK05952 3-oxoacyl-(acyl carri 52.3 21 0.00045 38.5 5.0 74 216-291 256-334 (381)
227 PRK06501 3-oxoacyl-(acyl carri 52.1 28 0.00061 37.9 6.0 76 216-291 291-372 (425)
228 PRK06333 3-oxoacyl-(acyl carri 52.1 40 0.00087 36.5 7.2 44 216-259 290-334 (424)
229 smart00825 PKS_KS Beta-ketoacy 50.8 39 0.00086 36.3 6.9 45 216-260 281-326 (424)
230 TIGR03722 arch_KAE1 universal 50.1 23 0.0005 37.2 4.8 37 208-245 42-78 (322)
231 PRK07937 lipid-transfer protei 49.7 45 0.00098 35.6 6.9 77 217-299 249-333 (352)
232 TIGR03723 bact_gcp putative gl 49.4 53 0.0011 34.4 7.3 54 214-271 51-109 (314)
233 PRK06289 acetyl-CoA acetyltran 48.9 63 0.0014 34.9 8.1 42 217-262 279-320 (403)
234 PLN03170 chalcone synthase; Pr 48.7 34 0.00074 37.2 5.9 72 210-285 277-354 (401)
235 PF01135 PCMT: Protein-L-isoas 47.9 16 0.00035 36.1 3.0 36 476-511 53-88 (209)
236 PRK08722 3-oxoacyl-(acyl carri 47.7 32 0.0007 37.4 5.6 76 216-291 280-362 (414)
237 KOG2707 Predicted metalloprote 47.4 45 0.00098 35.7 6.2 48 213-260 83-135 (405)
238 PRK12578 acetyl-CoA acetyltran 46.9 43 0.00094 35.9 6.3 42 217-262 260-301 (385)
239 PRK06365 acetyl-CoA acetyltran 46.4 72 0.0016 35.0 8.1 41 217-262 296-339 (430)
240 PRK09605 bifunctional UGMP fam 46.3 30 0.00065 38.8 5.2 37 208-245 45-81 (535)
241 PRK08313 acetyl-CoA acetyltran 46.0 73 0.0016 34.3 7.9 42 216-261 257-300 (386)
242 PLN03173 chalcone synthase; Pr 45.9 43 0.00093 36.3 6.1 73 209-285 272-350 (391)
243 cd00833 PKS polyketide synthas 45.0 42 0.00092 35.8 6.0 77 215-291 280-365 (421)
244 PRK09116 3-oxoacyl-(acyl carri 44.7 31 0.00066 37.5 4.8 43 217-259 278-321 (405)
245 KOG1389 3-oxoacyl CoA thiolase 44.3 47 0.001 35.0 5.7 69 218-291 324-399 (435)
246 PRK07910 3-oxoacyl-(acyl carri 42.3 43 0.00093 36.5 5.5 45 216-260 288-333 (418)
247 PRK06066 acetyl-CoA acetyltran 41.8 84 0.0018 34.0 7.6 42 217-262 259-302 (385)
248 TIGR01796 CM_mono_aroH monofun 41.6 72 0.0016 28.8 5.8 57 213-273 19-78 (117)
249 COG0304 FabB 3-oxoacyl-(acyl-c 41.3 42 0.00091 36.7 5.2 44 216-259 278-322 (412)
250 PLN03172 chalcone synthase fam 40.9 50 0.0011 35.8 5.7 70 211-284 274-349 (393)
251 PRK08170 acetyl-CoA acetyltran 40.4 1.6E+02 0.0034 32.3 9.5 17 320-336 263-279 (426)
252 PF07736 CM_1: Chorismate muta 40.1 75 0.0016 28.8 5.7 57 211-271 17-76 (118)
253 PRK06157 acetyl-CoA acetyltran 38.6 1.3E+02 0.0029 32.4 8.6 42 217-262 269-312 (398)
254 PRK08142 acetyl-CoA acetyltran 37.5 1E+02 0.0022 33.4 7.3 40 217-260 258-297 (388)
255 PRK00768 nadE NAD synthetase; 37.4 4.8E+02 0.01 26.9 12.4 149 156-331 3-180 (268)
256 PTZ00340 O-sialoglycoprotein e 37.4 1E+02 0.0023 32.9 7.3 58 208-271 46-109 (345)
257 PRK13410 molecular chaperone D 35.6 85 0.0018 36.5 6.8 68 213-284 308-375 (668)
258 PLN03171 chalcone synthase-lik 34.5 1E+02 0.0022 33.4 6.9 71 210-285 275-360 (399)
259 KOG1794 N-Acetylglucosamine ki 34.4 2.1E+02 0.0045 30.1 8.5 111 214-336 47-165 (336)
260 PLN02836 3-oxoacyl-[acyl-carri 34.4 69 0.0015 35.1 5.6 44 216-259 301-345 (437)
261 PRK09585 anmK anhydro-N-acetyl 33.2 1.1E+02 0.0025 32.9 6.8 76 204-279 61-146 (365)
262 PF00195 Chal_sti_synt_N: Chal 32.6 2.2E+02 0.0047 28.7 8.3 68 432-505 119-190 (226)
263 KOG1406 Peroxisomal 3-ketoacyl 32.4 41 0.00089 34.6 3.1 28 213-240 271-298 (408)
264 cd02185 AroH Chorismate mutase 31.6 1.4E+02 0.003 27.0 6.0 57 213-272 19-77 (117)
265 PLN03184 chloroplast Hsp70; Pr 29.6 1.3E+02 0.0027 35.2 6.9 67 214-284 346-412 (673)
266 COG1153 FwdD Formylmethanofura 29.2 54 0.0012 29.7 2.9 51 478-535 31-87 (128)
267 PRK05183 hscA chaperone protei 28.9 1.2E+02 0.0027 34.8 6.7 67 213-283 308-374 (616)
268 TIGR02350 prok_dnaK chaperone 28.7 1.1E+02 0.0023 35.0 6.0 66 213-282 304-369 (595)
269 PRK08304 stage V sporulation p 28.6 1.6E+02 0.0034 31.5 6.7 87 216-304 210-312 (337)
270 PRK00290 dnaK molecular chaper 28.2 1.4E+02 0.003 34.4 6.9 65 214-282 307-371 (627)
271 COG2518 Pcm Protein-L-isoaspar 26.6 54 0.0012 32.6 2.8 38 472-511 51-88 (209)
272 CHL00094 dnaK heat shock prote 26.1 1.5E+02 0.0032 34.2 6.6 63 216-282 311-373 (621)
273 TIGR01991 HscA Fe-S protein as 26.0 1.6E+02 0.0035 33.8 6.8 65 214-282 293-357 (599)
274 PRK08329 threonine synthase; V 25.8 68 0.0015 34.0 3.6 34 476-509 312-345 (347)
275 PF09936 Methyltrn_RNA_4: SAM- 25.4 1.8E+02 0.0039 28.3 6.0 74 425-509 71-144 (185)
276 PTZ00186 heat shock 70 kDa pre 25.1 1.9E+02 0.0042 33.6 7.4 65 216-284 336-400 (657)
277 TIGR02435 CobG precorrin-3B sy 25.0 2.9E+02 0.0064 29.7 8.3 95 170-277 269-372 (390)
278 KOG1202 Animal-type fatty acid 24.5 40 0.00086 41.5 1.6 121 213-338 88-248 (2376)
279 PRK12404 stage V sporulation p 24.3 2.7E+02 0.0058 29.7 7.5 87 216-304 208-310 (334)
280 PRK13411 molecular chaperone D 23.8 1.6E+02 0.0034 34.2 6.3 66 214-282 308-373 (653)
281 PRK07103 polyketide beta-ketoa 22.8 1.6E+02 0.0034 31.9 5.8 24 217-240 284-307 (410)
282 PTZ00009 heat shock 70 kDa pro 22.3 1.9E+02 0.0041 33.6 6.6 66 216-284 315-380 (653)
283 PF09663 Amido_AtzD_TrzD: Amid 22.1 2.5E+02 0.0055 30.0 6.7 71 211-287 129-202 (365)
284 COG2377 Predicted molecular ch 21.9 1.7E+02 0.0036 31.6 5.5 67 204-270 63-141 (371)
285 PTZ00400 DnaK-type molecular c 21.3 1.3E+02 0.0029 34.8 5.1 63 216-282 350-412 (663)
286 PLN02854 3-ketoacyl-CoA syntha 21.0 3.6E+02 0.0077 30.6 8.2 42 216-261 387-434 (521)
287 PRK13953 mscL large-conductanc 20.8 76 0.0017 29.0 2.4 27 8-34 10-36 (125)
288 PF04241 DUF423: Protein of un 20.7 4.8E+02 0.01 22.1 7.1 33 55-87 10-42 (89)
289 TIGR02714 amido_AtzD_TrzD ring 20.6 2.1E+02 0.0045 30.6 5.7 33 209-241 128-161 (366)
290 KOG1390 Acetyl-CoA acetyltrans 20.3 1.5E+02 0.0033 31.5 4.6 80 432-516 311-394 (396)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.4e-122 Score=998.04 Aligned_cols=511 Identities=90% Similarity=1.412 Sum_probs=485.2
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHHhhhhHHH
Q 008975 36 MTEPKPNTPLIPPTSPSRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWEHLQYNLIS 115 (547)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (547)
|+|+...++. ..+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|++.+|..+++++++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
T PLN02192 1 MSEVNQKTPL-IEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLIS 79 (511)
T ss_pred CccccccCcc-cccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 4454433332 234789999999999999999999999999999999999998889999999999998899988889999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCc
Q 008975 116 VIICSTLLVFLLTLYFLTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEA 195 (547)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~ 195 (547)
++.+++++++++++|+|+||++|||+||+||+|++++++|.+.++|+.+..|.|++++++||+|+++|||+|++||+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~ 159 (511)
T PLN02192 80 VILCSTLLVFLSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEA 159 (511)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChh
Confidence 89888888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccch
Q 008975 196 VLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCS 275 (547)
Q Consensus 196 ~~~~~~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCs 275 (547)
.++.|++.+|+++|+|+++++++|+++||+++|++|+|||+||++|++++++||++++|+++||+++++.+|||+|||||
T Consensus 160 ~~~~~~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCS 239 (511)
T PLN02192 160 VLNVPPNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCS 239 (511)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeec
Q 008975 276 AGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKG 355 (547)
Q Consensus 276 ggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~ 355 (547)
||++||++|+++|+++++++||||++|++|.+||.++||+++++|++|||||||+||++++.++++++|+|.++++++.+
T Consensus 240 ggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~ 319 (511)
T PLN02192 240 AGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKG 319 (511)
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999766555689999999999999
Q ss_pred CCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccc
Q 008975 356 ADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAF 435 (547)
Q Consensus 356 sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~di 435 (547)
+|++.|+|+++++|++|+.|+.|+||+|.++|++++.|++++||.++|.+|+.+++++|.++++|+.+++.|+|+++.+|
T Consensus 320 ~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~I 399 (511)
T PLN02192 320 ADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAF 399 (511)
T ss_pred CChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999988899999999999998999999999
Q ss_pred cEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEE
Q 008975 436 EHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 515 (547)
Q Consensus 436 d~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~ 515 (547)
||||+||+|++++|.++++||++++++|+|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||
T Consensus 400 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~ 479 (511)
T PLN02192 400 EHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 479 (511)
T ss_pred ceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccCCcccCCCCccccccCCCCCCCCCCC
Q 008975 516 KALRSINSAKEKNPWMDEIHHFPVDVPKVSTI 547 (547)
Q Consensus 516 r~~~~~~~~~~~~~w~~~i~~~p~~~~~~~~~ 547 (547)
||++++++..+.|||+||||+|||++|++..|
T Consensus 480 ~~~~~~~~~~~~~~w~~~i~~yp~~~~~~~~~ 511 (511)
T PLN02192 480 KALRTVNPAKEKNPWMDEIHEFPVDVPKVSTI 511 (511)
T ss_pred eeecccCCcccCCCchhhHHhCCCCCCCCCCC
Confidence 99999987642499999999999999998764
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.9e-119 Score=974.17 Aligned_cols=497 Identities=67% Similarity=1.143 Sum_probs=474.8
Q ss_pred CCCCCCCCCCCCcccccccchhhhhhHHHHHHH---HHHHHHHHHHHHHHHhcccChhhHHHHHHH--hhhhHHHHHHHH
Q 008975 46 IPPTSPSRNLPDFKKSVKLKYVKLGYHYLITHG---MFLFLSPLVVIVAAQLSTFSFQDLYDLWEH--LQYNLISVIICS 120 (547)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 120 (547)
..++++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++++++++|++.+|.. ++++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (521)
T PLN02854 17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLTGS 96 (521)
T ss_pred ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHHH
Confidence 566788999999999999999999999999999 677899998888999999999999889988 888899999998
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCC
Q 008975 121 TLLVFLLTLYFLTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIP 200 (547)
Q Consensus 121 ~~~~~~~~~~~~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~ 200 (547)
+++++++++|+|+||++|||+||+||+|++++++|.+.++|+.+..|.|++++++||+||++|||+|++||+|+..++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~ 176 (521)
T PLN02854 97 AFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSRP 176 (521)
T ss_pred HHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHH
Q 008975 201 PNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLIS 280 (547)
Q Consensus 201 ~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~A 280 (547)
+..+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++||+|++|+++||+++++.+|||+|||||||++|
T Consensus 177 ~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~a 256 (521)
T PLN02854 177 PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLIS 256 (521)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCc
Q 008975 281 IDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNC 360 (547)
Q Consensus 281 L~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~ 360 (547)
|++|+++++++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.|++++++++|++.
T Consensus 257 L~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~ 336 (521)
T PLN02854 257 IDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKN 336 (521)
T ss_pred HHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCc
Confidence 99999999999999999999999999999999999999999999999999999976554568999999999999999999
Q ss_pred ccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEe
Q 008975 361 FACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCI 440 (547)
Q Consensus 361 ~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~ 440 (547)
|+|+++++|+.|..|+++++|+|.+++++++.|++.+||.|+|.+|+++|......+++.+..+++|+|+|++||||||+
T Consensus 337 ~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~i 416 (521)
T PLN02854 337 YNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCI 416 (521)
T ss_pred cCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEE
Confidence 99999999988888999999999999999999999999999999999998888777777777788899999999999999
Q ss_pred ccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEecc
Q 008975 441 HAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRS 520 (547)
Q Consensus 441 H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~ 520 (547)
||+|++++++++++||++++++|+|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||+++|||+|+
T Consensus 417 Hqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~~ 496 (521)
T PLN02854 417 HAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALRE 496 (521)
T ss_pred CCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCc--ccCCCCccccccCCCCCCC
Q 008975 521 INSA--KEKNPWMDEIHHFPVDVPK 543 (547)
Q Consensus 521 ~~~~--~~~~~w~~~i~~~p~~~~~ 543 (547)
+++. . +|||+||||+|||++|.
T Consensus 497 ~~~~~~~-~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 497 IPTGEST-GNPWADSIDRYPVKVPV 520 (521)
T ss_pred CCccccC-CCCchhhHhhCCCCCCC
Confidence 9865 4 69999999999999875
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=8.5e-117 Score=954.73 Aligned_cols=496 Identities=68% Similarity=1.145 Sum_probs=474.3
Q ss_pred CCCCCCCCCCCCCcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHHhhhhHHHHHHHHHHHH
Q 008975 45 LIPPTSPSRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWEHLQYNLISVIICSTLLV 124 (547)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (547)
-+++|++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|++.+|..++++++++++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (502)
T PLN02377 5 GEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLV 84 (502)
T ss_pred ceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999998889999999999998899888889999888888888
Q ss_pred HHHHHHHhcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcc
Q 008975 125 FLLTLYFLTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPS 204 (547)
Q Consensus 125 ~~~~~~~~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ 204 (547)
+++++|+|+||++||++||+||+|++++++|.+.++|+.+..|.|++++++||+||+++|||+++||+|+..++.|++.+
T Consensus 85 ~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~ 164 (502)
T PLN02377 85 FGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPS 164 (502)
T ss_pred HHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHH
Q 008975 205 MKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLA 284 (547)
Q Consensus 205 ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA 284 (547)
|+++|+|+++++++|+++||+++|++|+|||+||++|++++++||+|++|+++||+++++.+|||+||||+||++||++|
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA 244 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLA 244 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccce
Q 008975 285 NNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACV 364 (547)
Q Consensus 285 ~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v 364 (547)
+++++++++++||||++|++|.+||.+++++++++|++|||||||+||++++.++++++|++.|+++++.++|++.|+|+
T Consensus 245 ~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i 324 (502)
T PLN02377 245 KDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCV 324 (502)
T ss_pred HHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCcccee
Confidence 99999999999999999999999998888899999999999999999999765555788999999999999999999999
Q ss_pred eeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCC
Q 008975 365 TQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGG 444 (547)
Q Consensus 365 ~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~g 444 (547)
++++|+.|+.|+++++|+|.++|++++.|++++||.|+|.+|++.++.....+++++..++++.|++++||||||+||+|
T Consensus 325 ~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqgg 404 (502)
T PLN02377 325 YQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGG 404 (502)
T ss_pred eeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCC
Confidence 99999889999999999999999999999999999999999999888777778888877888888999999999999999
Q ss_pred HHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEecccCCc
Q 008975 445 RAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSA 524 (547)
Q Consensus 445 r~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~~~~~ 524 (547)
++++++++++|||+++++|+|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+|++++.
T Consensus 405 r~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~ 484 (502)
T PLN02377 405 RAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPS 484 (502)
T ss_pred HHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ccCCCCccccccCCCCC
Q 008975 525 KEKNPWMDEIHHFPVDV 541 (547)
Q Consensus 525 ~~~~~w~~~i~~~p~~~ 541 (547)
. +|||+||||+|||++
T Consensus 485 ~-~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 485 N-NSPWEDCIDKYPVKL 500 (502)
T ss_pred C-CCCchhhHhhCCCcc
Confidence 6 699999999999974
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.1e-109 Score=894.72 Aligned_cols=469 Identities=59% Similarity=0.998 Sum_probs=448.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccChhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEEcCCCC
Q 008975 72 HYLITHGMFLFLSPLVVIVAAQLSTFSFQDLYDLWEHLQYNLISVIICSTLLVFLLTLYFLTRPRPVYLVDFSCYKPEES 151 (547)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~g~y~P~~~ 151 (547)
.|+++|+++++++|++++++.++.+++.+|++.+|..+++++++++.+++++++++++|+|+||++|||+||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999998889999999999998899888888889888888888999999999999999999999999999
Q ss_pred ceecHHHHHHHhhhc---CCCChHh---HHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 008975 152 RKCTKRIFMDQSRMT---GTFTEEN---LQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFA 225 (547)
Q Consensus 152 ~~vt~e~~~e~~~~~---~~~~~~~---~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~~~Aa~~aL~ 225 (547)
+++|.+.++++.+.. |.|++++ ++||+||++||||++|||+|+..++.|+..+|+++|+|+++++++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998766 7898888 9999999999999999999999988888899999999999999999999999
Q ss_pred hCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEcccc
Q 008975 226 KTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENIT 305 (547)
Q Consensus 226 kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S 305 (547)
++|++|+|||+||++|++++++||++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999998888999999999999999989999999999999999999999999999999999999999999
Q ss_pred CcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccccccchhhHHH
Q 008975 306 LNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAV 385 (547)
Q Consensus 306 ~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v 385 (547)
.+||.+++|++++++++|||||||+||++++.++++++|+|.|+++++.++||+.|+|+++++|++|..|+.|+|++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99999888999999999999999999999775545689999999999999999999999999998899999999999999
Q ss_pred hhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHcCCCccccccc
Q 008975 386 AGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPS 465 (547)
Q Consensus 386 ~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S 465 (547)
++++++.|++++||.|+|++|++++++++.++++++.+.+.|.|+++++|||||+||+|++++++++++||++++++|+|
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s 401 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEAS 401 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHH
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEecccCCcccCCCCccccccCCCCC
Q 008975 466 RMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAKEKNPWMDEIHHFPVDV 541 (547)
Q Consensus 466 ~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~~~~~~~~~~w~~~i~~~p~~~ 541 (547)
+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++|++++.. +|||+||||+|||++
T Consensus 402 ~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~-~~~w~~~i~~yp~~~ 476 (478)
T PLN02932 402 RMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSA-NNPWEDCLHKYPVEI 476 (478)
T ss_pred HHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcC-CCCchhhHhhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998876 699999999999975
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4e-100 Score=812.34 Aligned_cols=430 Identities=60% Similarity=1.052 Sum_probs=406.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEe
Q 008975 112 NLISVIICSTLLVFLLTLYFLTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTY 191 (547)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~ 191 (547)
.+..+-+.+.++++++++|+++||++||++||+||+|++++++|.+.++|+.+..+.|++++++||+||+++|||++++|
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~ 113 (466)
T PLN00415 34 SPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTY 113 (466)
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCee
Confidence 33334444445556677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC
Q 008975 192 LPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 192 ~~~~~~~~~~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g 271 (547)
.|+..++.|+..+|+++|+|+++.++.|+++||+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+|
T Consensus 114 ~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~g 193 (466)
T PLN00415 114 SPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSG 193 (466)
T ss_pred eCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEecc
Confidence 99999998888999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEE
Q 008975 272 MGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVR 351 (547)
Q Consensus 272 mgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~ 351 (547)
|||+||+.||++|+++++++++++||||++|.+|.+||+++|++++++|++|||||||+||++++.++++++|+|.++++
T Consensus 194 mGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vr 273 (466)
T PLN00415 194 MGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVR 273 (466)
T ss_pred ccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEE
Confidence 99999999999999999999999999999999999899999999999999999999999999987666668999999999
Q ss_pred eeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccc
Q 008975 352 THKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDF 431 (547)
Q Consensus 352 t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~ 431 (547)
++.+.+++.|.|+++.+|++|..|+.|+||+|.+++++++.|+++++|.++|++|++++.....+++.++...++|+|++
T Consensus 274 t~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~ 353 (466)
T PLN00415 274 THKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDF 353 (466)
T ss_pred ecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCCc
Confidence 99988889999999999999999999999999999999999999999999999999999888888999887788899999
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhhe
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCN 511 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~ 511 (547)
+..++|||+|+||++|+|+++++|||+++++++||++|+|||||||+|+||+|+|+++++++++||++||+|||+||+|+
T Consensus 354 ~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~e 433 (466)
T PLN00415 354 KLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCN 433 (466)
T ss_pred cccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchhh
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEecccCCccc--CCCCccccccCCCCC
Q 008975 512 SAVWKALRSINSAKE--KNPWMDEIHHFPVDV 541 (547)
Q Consensus 512 sav~r~~~~~~~~~~--~~~w~~~i~~~p~~~ 541 (547)
++||||+|++++..+ .|||+||||+|||++
T Consensus 434 s~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 434 SIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred HhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 999999999987541 399999999999964
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.1e-78 Score=611.03 Aligned_cols=290 Identities=69% Similarity=1.151 Sum_probs=284.5
Q ss_pred HHhcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHH
Q 008975 130 YFLTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEAR 209 (547)
Q Consensus 130 ~~~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r 209 (547)
|+|+||++|||+||+||+|++++++|.++++++++..+.|++++++||+||+++|||+++||+|+..++.|+..+|+++|
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+|++++++.|++++|+|+|++|+|||+||+|||.|+|+||+++||+|+||||+|+++|||+|||||||+++|++|+++|+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccC
Q 008975 290 VHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEED 369 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed 369 (547)
.+|+++||||++|++|.+||.|+||+|+++||+|||||||+||||++.+++++||+|.|++|||++++|++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHH
Q 008975 370 SEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKL 419 (547)
Q Consensus 370 ~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v 419 (547)
++|..|+.|+||+|.++|++||.||++|||+|||++||++|.+++..||+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999988877663
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=5.1e-54 Score=442.40 Aligned_cols=311 Identities=21% Similarity=0.305 Sum_probs=263.3
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV 215 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l 215 (547)
.+++|.++|.|+|+ ++++|+++.+.... ++|| |..++||++||++.+++ ..++|+
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sdew------I~~rtGir~R~~a~~~e----~~s~la--------- 56 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDEW------IETRTGIRERRIAADDE----TTSDLA--------- 56 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccce------eeeecCCceeeecCCCc----cHHHHH---------
Confidence 46899999999999 99999999977665 6777 78999999999998776 345555
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNS 294 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~ 294 (547)
++|+++||+++|++|+|||++|++| +|++++|++|++||++||+. ++.+||++ .+|+|++.||++|..++++|.++
T Consensus 57 -~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 57 -VEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred -HHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999996 58999999999999999998 59999999 69999999999999999999999
Q ss_pred eEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCcc
Q 008975 295 YALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKV 374 (547)
Q Consensus 295 ~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~ 374 (547)
+||||++|++|+ +.+++||.+ ..+|||||+|+||++.+.+. ++..+++++|+..+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 678899976 57999999999999987332 45677889999888777665431110
Q ss_pred ccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccc----------cccccccccEEEeccCC
Q 008975 375 GVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY----------IPDFKLAFEHFCIHAGG 444 (547)
Q Consensus 375 g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~----------ip~~~~did~f~~H~~g 444 (547)
.+. ... ..++.|.++++|+.+++.+ ....++|||||++||+|
T Consensus 201 ----~~~------~~~------------------~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQan 252 (323)
T COG0332 201 ----PKE------ESG------------------GGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQAN 252 (323)
T ss_pred ----ccc------ccc------------------ccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccccc
Confidence 000 000 0123455666666544331 12236899999999999
Q ss_pred HHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEe
Q 008975 445 RAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 518 (547)
Q Consensus 445 r~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~ 518 (547)
+++++.++++||++++++ ..++++|||||++|+|+.|+++.++|++|+||++++.+||+|++|+++++||.
T Consensus 253 ~ri~~~i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 253 LRIIEAIAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHHHHHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999999999 68999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8.1e-51 Score=432.65 Aligned_cols=349 Identities=17% Similarity=0.216 Sum_probs=271.8
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCC-ChHhHHH-HHHHHHHhCCceEEecCC-c---ccCC------C-CC
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTF-TEENLQF-QKKILERSGLGDSTYLPE-A---VLNI------P-PN 202 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~-~~~~~~f-~~rI~~~sGI~er~~~~~-~---~~~~------~-~~ 202 (547)
.+++|.++|++.|+ +.++++++.+.+....+- +...++. ++||++++||++|+..-+ + ++.. | ..
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 999999999987643211 1122333 578999999999986532 1 1110 1 12
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 203 PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 203 ~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++.++.+.++||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLR 172 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHH
Confidence 34667889999999999999999999999999999988765555999999999999999888765444489999999999
Q ss_pred HHHHHHhcCCCCeEEEEEEccccCcccCCCC--ccccccccccccceEEEEEeccCCCc-ccccceeeeEEEeee-cCCC
Q 008975 283 LANNLLQVHPNSYALVISMENITLNWYFGND--RSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHK-GADD 358 (547)
Q Consensus 283 lA~~lL~sg~~~~aLVVstE~~S~~~~~~~d--r~~lv~~~lFGDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~-~sd~ 358 (547)
+|++++++++.++||||++|.+|.++.+++| ++.++++++|||||+|+||++++... .++.|++.+..++.. .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~ 252 (393)
T PLN03172 173 LAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDG 252 (393)
T ss_pred HHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCcc
Confidence 9999999999999999999999976755555 34667889999999999999865421 235578777655443 3444
Q ss_pred CcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEE
Q 008975 359 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 438 (547)
Q Consensus 359 ~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f 438 (547)
.....+.. ++.++.+++++|..+.+.+...+ +++++.. .....|+++|
T Consensus 253 ~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~-----gl~~~di~~~ 300 (393)
T PLN03172 253 AIDGHLRE-----VGLTFHLLKDVPGLISKNIEKSL----------------------VEAFAPI-----GINDWNSIFW 300 (393)
T ss_pred cccceEEc-----CCcEEEEechHHHHHHHHHHHHH----------------------HHHhhhc-----CCCccccceE
Confidence 33222221 22457788999987765433211 1233211 1114789999
Q ss_pred EeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEecchhhhe
Q 008975 439 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRIKKG---DRTWQIAFGSGFKCN 511 (547)
Q Consensus 439 ~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~----~~gri~~G---DrVlliafGsG~~~~ 511 (547)
++||+|+++++.+++.||++++++.+|+++|++||||||+|+++.|+++. ++|++++| |+++++|||+|++++
T Consensus 301 ~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 380 (393)
T PLN03172 301 IAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVE 380 (393)
T ss_pred EecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceee
Confidence 99999999999999999999999999999999999999999999999987 45788887 899999999999999
Q ss_pred eEEEEEe
Q 008975 512 SAVWKAL 518 (547)
Q Consensus 512 sav~r~~ 518 (547)
++++||.
T Consensus 381 ~~ll~~~ 387 (393)
T PLN03172 381 TVVLHSV 387 (393)
T ss_pred eeeeEec
Confidence 9999995
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=6.7e-51 Score=429.02 Aligned_cols=344 Identities=40% Similarity=0.601 Sum_probs=265.7
Q ss_pred eEEEEEeEEcCCCCceecHHHHHHHhhhcCC--CChHhHHHHHHHHHHhCCceEEecCC--cccC-------CCCCcchH
Q 008975 138 VYLVDFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDSTYLPE--AVLN-------IPPNPSMK 206 (547)
Q Consensus 138 v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~rI~~~sGI~er~~~~~--~~~~-------~~~~~~ma 206 (547)
+||.++|.|+|+ ++++|+++.+++..... +.+...++.++|++++||++|+++.+ .+.. .......+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 789999999999 89999999998764211 11334566688999999999999875 3211 11234566
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHH
Q 008975 207 EARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 207 ~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~ 286 (547)
.+.+++.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998877889999999999999997899999997899999999999999
Q ss_pred HHhcCCCCeEEEEEEccccCcccCCCC-ccccccccccccceEEEEEeccCCCcc--cccceeeeEEEeeecCCCCcccc
Q 008975 287 LLQVHPNSYALVISMENITLNWYFGND-RSKLVSNCLFRMGGAAILLSNRFSDRR--RSKYRLVHTVRTHKGADDNCFAC 363 (547)
Q Consensus 287 lL~sg~~~~aLVVstE~~S~~~~~~~d-r~~lv~~~lFGDGAAAvLLs~~~~~~~--~a~~~L~~~v~t~~~sd~~~~~~ 363 (547)
++++++.++||||++|..|. ++++.| +.+.+++++|||||+|+||++++.... ...+++.+.........+....
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~- 237 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMG- 237 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCceE-
Confidence 99999999999999999988 667666 777677899999999999998765321 1234443332211111100000
Q ss_pred eeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhcccc--ccccccccEEEec
Q 008975 364 VTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYI--PDFKLAFEHFCIH 441 (547)
Q Consensus 364 v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~i--p~~~~did~f~~H 441 (547)
+... ++...+.+.++++....+ ...+.++..++. . +...+|||||++|
T Consensus 238 -~~~~--~~~~~~~~~~~v~~~~~~--------------------------~~~~~i~~~L~~-~~~g~~~~did~~~~H 287 (361)
T cd00831 238 -WHLG--EEGLTFVLSRDVPRLVEK--------------------------NLERVLRKLLAR-LGIGLFKLAFDHWCVH 287 (361)
T ss_pred -EEEE--cceEEEEeChhHHHHHHH--------------------------HHHHHHHHHhcc-ccCCCccccceEEEEC
Confidence 0000 011112222222221111 112233333332 2 3446899999999
Q ss_pred cCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEE
Q 008975 442 AGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 515 (547)
Q Consensus 442 ~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~ 515 (547)
|+|+++++.+++.||++++++++|++++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 288 ~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 288 PGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999987
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1e-49 Score=424.10 Aligned_cols=349 Identities=18% Similarity=0.225 Sum_probs=261.9
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCC--CChHhHHHHHHHHHHhCCceEEecC-Ccc---cC------CC-CC
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDSTYLP-EAV---LN------IP-PN 202 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~rI~~~sGI~er~~~~-~~~---~~------~~-~~ 202 (547)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+-++||++++||+.|+..- ++. +. .| ..
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 46999999999999 89999999998765321 0122233358899999999998643 211 11 01 12
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCce-eEEEecCccchHHHHHH
Q 008975 203 PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-ISYNLGGMGCSAGLISI 281 (547)
Q Consensus 203 ~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~-~~fdL~gmgCsggl~AL 281 (547)
..++.+.+++.+|+.+|+++||+++|++|+|||+||++|++.+..|+++++|+++||+++++ +++|++ +||+||+.||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 34667889999999999999999999999999999999765566899999999999999776 478888 7999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEEccccCcccCCC--CccccccccccccceEEEEEeccCCCc-ccccceeeeEEEeeec-CC
Q 008975 282 DLANNLLQVHPNSYALVISMENITLNWYFGN--DRSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHKG-AD 357 (547)
Q Consensus 282 ~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~--dr~~lv~~~lFGDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~~-sd 357 (547)
++|++++++++.++||||++|.+|.+|.... +.+.++++++|||||+|+||++++... .++.+++....++.+. ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998664322 244556789999999999999865321 1233444433233222 22
Q ss_pred CCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccE
Q 008975 358 DNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEH 437 (547)
Q Consensus 358 ~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~ 437 (547)
+. .. ... ++ .+..+.+++++|....+.++ ++++..++. ......|+++
T Consensus 251 ~~-~~-~~~--~~-~g~~~~l~~~vp~~i~~~~~--------------------------~~l~~~l~~-~~~~~~d~~~ 298 (389)
T PLN03168 251 GA-ID-GHL--TE-AGLIFHLMKDVPGLISKNIE--------------------------KFLNEARKC-VGSPDWNEMF 298 (389)
T ss_pred Cc-cC-ceE--ec-CceEEEECHHHHHHHHHHHH--------------------------HHHHHHHHh-cCCCccccce
Confidence 21 11 001 11 22345667777766543221 122222111 1111357789
Q ss_pred EEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCC--------CEEEEEEecchhh
Q 008975 438 FCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKG--------DRTWQIAFGSGFK 509 (547)
Q Consensus 438 f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~G--------DrVlliafGsG~~ 509 (547)
|++||+|+++++.++++|||++|++..|+.++++||||||+|+++.|++++++ ++++| |+++++|||+||+
T Consensus 299 ~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t 377 (389)
T PLN03168 299 WAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLT 377 (389)
T ss_pred EEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhh
Confidence 99999999999999999999999999899999999999999999999999865 66655 8999999999999
Q ss_pred heeEEEEEecc
Q 008975 510 CNSAVWKALRS 520 (547)
Q Consensus 510 ~~sav~r~~~~ 520 (547)
|+++++||..+
T Consensus 378 ~~~~llr~~~~ 388 (389)
T PLN03168 378 LEVLVLRAAAN 388 (389)
T ss_pred hhhhhheeccc
Confidence 99999999654
No 11
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.3e-49 Score=423.86 Aligned_cols=354 Identities=19% Similarity=0.263 Sum_probs=261.6
Q ss_pred HhcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHH-HHHHHHHHhCCceEEecCCcc----c---CCCC-
Q 008975 131 FLTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQ-FQKKILERSGLGDSTYLPEAV----L---NIPP- 201 (547)
Q Consensus 131 ~~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~-f~~rI~~~sGI~er~~~~~~~----~---~~~~- 201 (547)
..+.|.+++|.++|+|+|+ ++++|+++.+.+.....-++++++ .++||++++||++|+++.+++ + ..+.
T Consensus 15 ~~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 15 RAANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred ccCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 3467889999999999999 999999999864431111234433 357899999999999874211 0 0011
Q ss_pred ---CcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCce-eEEEecCccchHH
Q 008975 202 ---NPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-ISYNLGGMGCSAG 277 (547)
Q Consensus 202 ---~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~-~~fdL~gmgCsgg 277 (547)
...+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ ++||++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 122334678899999999999999999999999999999888999999999999999998777 479999 799999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEEccccCcccCCC-C-ccccccccccccceEEEEEeccCCCc-ccccceeeeEEEeee
Q 008975 278 LISIDLANNLLQVHPNSYALVISMENITLNWYFGN-D-RSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHK 354 (547)
Q Consensus 278 l~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~-d-r~~lv~~~lFGDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~ 354 (547)
+.||++|.+++++++.++||||++|..|.++.... + ....+..++|||||+|+||++++... ....|++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887654221 1 22334568999999999999765321 112344432222222
Q ss_pred cCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhcccccccccc
Q 008975 355 GADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLA 434 (547)
Q Consensus 355 ~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~d 434 (547)
...+..++ .....+| +.+.+++++|..+.+.+.. ..+++++.. +...+|
T Consensus 252 p~~~~~~~---~~~~~~g-~~~~~g~~v~~~~~~~~~~----------------------~i~~~L~~~-----gl~~~d 300 (391)
T PLN03169 252 PGTEKTID---GRLTEEG-INFKLGRELPQKIEDNIEG----------------------FCKKLMKKA-----GLVEKD 300 (391)
T ss_pred CCCccccC---ceecCCc-eEEEECcHHHHHHHHHHHH----------------------HHHHHHHHc-----CCCCCC
Confidence 11111111 0011112 2334556666554332210 112333221 122356
Q ss_pred cc--EEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCC---CCCEEEEEEecchhh
Q 008975 435 FE--HFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK---KGDRTWQIAFGSGFK 509 (547)
Q Consensus 435 id--~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~---~GDrVlliafGsG~~ 509 (547)
+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|++++++++++ +||++++++||+||+
T Consensus 301 id~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s 380 (391)
T PLN03169 301 YNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGIT 380 (391)
T ss_pred CCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHh
Confidence 88 9999999999999999999999999988889999999999999999999999888876 699999999999999
Q ss_pred heeEEEEEe
Q 008975 510 CNSAVWKAL 518 (547)
Q Consensus 510 ~~sav~r~~ 518 (547)
|+++++|+.
T Consensus 381 ~~~~ll~~~ 389 (391)
T PLN03169 381 FEGILARNL 389 (391)
T ss_pred HHHHHHhhh
Confidence 999999985
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.5e-49 Score=420.99 Aligned_cols=351 Identities=19% Similarity=0.212 Sum_probs=268.1
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCC--CChHhHHHHHHHHHHhCCceEEecCC-c---ccC---C---C-CC
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDSTYLPE-A---VLN---I---P-PN 202 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~rI~~~sGI~er~~~~~-~---~~~---~---~-~~ 202 (547)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+.++||++++||+.|+..-+ + ++. . | ..
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 46999999999999 89999999998865321 12222333688999999999986432 1 111 0 1 12
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 203 PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 203 ~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
..+..+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++..+.+.++||+|++.||+
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHH
Confidence 34567889999999999999999999999999999998765545899999999999999777655444489999999999
Q ss_pred HHHHHHhcCCCCeEEEEEEccccCcccCCCCc--cccccccccccceEEEEEeccCCCc-ccccceeeeEEEeee-cCCC
Q 008975 283 LANNLLQVHPNSYALVISMENITLNWYFGNDR--SKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHK-GADD 358 (547)
Q Consensus 283 lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr--~~lv~~~lFGDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~-~sd~ 358 (547)
+|++++++++.++||||++|.+|.+|++++|+ +.++++++|||||+|+||++++... .+++|++.+..++.. .+++
T Consensus 173 ~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~ 252 (391)
T PLN03173 173 LAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDG 252 (391)
T ss_pred HHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCcc
Confidence 99999999999999999999999767655553 4567789999999999999754321 124577766544433 3443
Q ss_pred CcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEE
Q 008975 359 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 438 (547)
Q Consensus 359 ~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f 438 (547)
. +..-... +++++.+++++|..+.+.+... .+++++.. .....|+|+|
T Consensus 253 ~-~~~~i~~----~G~~~~l~~~vp~~~~~~~~~~----------------------i~~~L~~~-----gl~~~di~~~ 300 (391)
T PLN03173 253 A-IDGHLRE----VGLTFHLLKDVPGLISKNVEKS----------------------LTEAFKPL-----GISDWNSLFW 300 (391)
T ss_pred c-eeeEEEc----CceEEEEecHHHHHHHHHHHHH----------------------HHHHHHhc-----CCCccccCeE
Confidence 3 2211111 2245678888888765433211 12333321 1125799999
Q ss_pred EeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHc----CCCCCC---CEEEEEEecchhhhe
Q 008975 439 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGFKCN 511 (547)
Q Consensus 439 ~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~----gri~~G---DrVlliafGsG~~~~ 511 (547)
++||+|+++++.+++.|||+++++.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+++
T Consensus 301 v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e 380 (391)
T PLN03173 301 IAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVE 380 (391)
T ss_pred EECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHH
Confidence 9999999999999999999999999999999999999999999999999963 444443 789999999999999
Q ss_pred eEEEEEecc
Q 008975 512 SAVWKALRS 520 (547)
Q Consensus 512 sav~r~~~~ 520 (547)
++++||..+
T Consensus 381 ~~ll~~~~~ 389 (391)
T PLN03173 381 TVVLHSVAP 389 (391)
T ss_pred HHHHhhccC
Confidence 999998543
No 13
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=1.8e-48 Score=415.90 Aligned_cols=351 Identities=18% Similarity=0.212 Sum_probs=266.1
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCC-ChHhHHH-HHHHHHHhCCceEEecCCcc----cCC------C-CC
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTF-TEENLQF-QKKILERSGLGDSTYLPEAV----LNI------P-PN 202 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~-~~~~~~f-~~rI~~~sGI~er~~~~~~~----~~~------~-~~ 202 (547)
.+.+|.++|+..|+ +.++++++.+.+.....- +....+. ++||++++||+.||..-+++ +.. | ..
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999988653211 1122333 68899999999998653211 110 1 12
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCce-eEEEecCccchHHHHHH
Q 008975 203 PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-ISYNLGGMGCSAGLISI 281 (547)
Q Consensus 203 ~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~-~~fdL~gmgCsggl~AL 281 (547)
..+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ +++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 34567889999999999999999999999999999988765555999999999999999776 478998 7999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEEccccCcccCCCC--ccccccccccccceEEEEEeccCCCc-ccccceeeeEEEeeecCCC
Q 008975 282 DLANNLLQVHPNSYALVISMENITLNWYFGND--RSKLVSNCLFRMGGAAILLSNRFSDR-RRSKYRLVHTVRTHKGADD 358 (547)
Q Consensus 282 ~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~d--r~~lv~~~lFGDGAAAvLLs~~~~~~-~~a~~~L~~~v~t~~~sd~ 358 (547)
++|++++++++.++||||++|.+|.++..+.+ .+..+++++|||||+|+||++++... .++.|++....+... .+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 99999999999999999999999987644332 23556678999999999999865421 123456654322222 111
Q ss_pred CcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEE
Q 008975 359 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 438 (547)
Q Consensus 359 ~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f 438 (547)
+.+..... .+.| ..+.+++++|..+.+.+... .+++++.. .....|+++|
T Consensus 255 ~~~~~~~i--~~~G-~~~~l~~~vp~~~~~~i~~~----------------------v~~~L~~~-----gl~~~di~~~ 304 (401)
T PLN03170 255 EGAIDGHL--REVG-LTFHLLKDVPGLISKNIERS----------------------LEEAFKPL-----GITDYNSIFW 304 (401)
T ss_pred cccccceE--EcCC-eEEEEehHHHHHHHHHHHHH----------------------HHHHHHhc-----CCCccccCeE
Confidence 11100001 1122 34567788887665433211 12233321 1124789999
Q ss_pred EeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEEecchhhhe
Q 008975 439 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSE----AKGRIKKG---DRTWQIAFGSGFKCN 511 (547)
Q Consensus 439 ~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~----~~gri~~G---DrVlliafGsG~~~~ 511 (547)
++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |+++++|||+||+|+
T Consensus 305 v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~ 384 (401)
T PLN03170 305 VAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVE 384 (401)
T ss_pred EecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHH
Confidence 99999999999999999999999988999999999999999999999987 46888888 899999999999999
Q ss_pred eEEEEEecc
Q 008975 512 SAVWKALRS 520 (547)
Q Consensus 512 sav~r~~~~ 520 (547)
++++||...
T Consensus 385 ~~ll~~~~~ 393 (401)
T PLN03170 385 TVVLHSVPI 393 (401)
T ss_pred hHHheeccc
Confidence 999999543
No 14
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=4.8e-48 Score=412.63 Aligned_cols=350 Identities=17% Similarity=0.215 Sum_probs=259.4
Q ss_pred CCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHh---HHHHHHHHHHhCCceEEecCCcc----------cCCC-
Q 008975 135 PRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEEN---LQFQKKILERSGLGDSTYLPEAV----------LNIP- 200 (547)
Q Consensus 135 ~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~---~~f~~rI~~~sGI~er~~~~~~~----------~~~~- 200 (547)
+.+++|.++|+|+|+ ++++|+++.+++..... ++++ .+.+++|++++||++|+++.+++ ...|
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 357999999999999 99999999998532110 1222 22346899999999999886542 0011
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCcee-EEEecCccchHHHH
Q 008975 201 PNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNII-SYNLGGMGCSAGLI 279 (547)
Q Consensus 201 ~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~-~fdL~gmgCsggl~ 279 (547)
....+..+.+.+.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++. .+++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 12345678889999999999999999999999999999997654458999999999999986653 56666 69999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEccccCcccCCCCc---cccccccccccceEEEEEeccCCCcccccceeeeEEEeeecC
Q 008975 280 SIDLANNLLQVHPNSYALVISMENITLNWYFGNDR---SKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGA 356 (547)
Q Consensus 280 AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr---~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~s 356 (547)
||++|.+++++++.++||||++|.+|..+ ++.|+ +.++.+++|||||+|+||++.++...+..|++.+.....
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 99999999999999999999999999843 44444 345567899999999999986643222346666543332
Q ss_pred CCCcccceeeccCCCCccccccc-hhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccc----cccc
Q 008975 357 DDNCFACVTQEEDSEGKVGVTLS-KNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY----IPDF 431 (547)
Q Consensus 357 d~~~~~~v~~~ed~~G~~g~~Ls-kdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~----ip~~ 431 (547)
+++..+.+....++.|.. ..++ +++|...++.++ ++++..+.+. ....
T Consensus 252 ~p~~~~~~~~~~~~~g~~-~~~~~~~vp~~i~~~l~--------------------------~~l~~~l~~~~~~~~g~~ 304 (399)
T PLN03171 252 IPESDDAINMHFTEGGLD-GNIGTRQVPGLIGDNIE--------------------------RCLLDAFAPLLGGDGGAE 304 (399)
T ss_pred ecCCchheEEEEEcCCce-EEECchhHHHHHHHHHH--------------------------HHHHHHHHhhcccccCCC
Confidence 222223232211111211 2333 556555443322 1222211110 0112
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCC--CCCC---CEEEEEEecc
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR--IKKG---DRTWQIAFGS 506 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gr--i~~G---DrVlliafGs 506 (547)
.+|++|+ +||+|+++++.++++||++++++..|++++++||||||+|+|+.|+++.++++ +++| |+++++|||+
T Consensus 305 ~~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~ 383 (399)
T PLN03171 305 WNDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGP 383 (399)
T ss_pred cccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcc
Confidence 4678765 69999999999999999999999888899999999999999999999988774 6888 9999999999
Q ss_pred hhhheeEEEEEecc
Q 008975 507 GFKCNSAVWKALRS 520 (547)
Q Consensus 507 G~~~~sav~r~~~~ 520 (547)
|++|++++|++.+.
T Consensus 384 Glt~~~~ll~~~~~ 397 (399)
T PLN03171 384 GLTVDAMLLHASGH 397 (399)
T ss_pred cHHHHHHHhhcccC
Confidence 99999999999764
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=9.1e-47 Score=391.84 Aligned_cols=322 Identities=14% Similarity=0.210 Sum_probs=243.9
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
+++|.++|.|+|+ ++++++++.+..+. ++++ +.+++||++|+++.+++ +..+| +
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~------i~~~~Gi~~r~~~~~~e----~~~~l----------a 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ETGW------IERRTGIRCRRWAAPDE----TLSDL----------A 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CHHH------hhhccCCeEEEEcCCCC----CHHHH----------H
Confidence 6899999999999 99999999987653 4443 77899999999987765 23445 5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|+++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999986 46889999999999999998 689999996 9999999999999999987 489
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
||||++|..+. +.+..++.. ..+|||||+|+||++++... ..+ ..+...++++.|+.+..+.+.. .
T Consensus 134 aLVv~~d~~s~-~~~~~~~~~---~~lfGDgA~A~ll~~~~~~~----~~~---l~~~~~t~~~~~~~~~~~~gg~---~ 199 (326)
T PRK05963 134 VLVVAANILSR-RINMAERAS---AVLFADAAGAVVLAPSAKAN----SGV---LGSQLISDGSHYDLIKIPAGGS---A 199 (326)
T ss_pred EEEEEechhhc-cCCccccCc---eEEEeecceEEEEEecCCCC----Cce---EEEEEEEcCCCCCeEEeCCCCc---C
Confidence 99999999886 344455543 57999999999999866431 222 3344556666666554443211 0
Q ss_pred cccchhhHHHhhhhhhccccc-cCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHH
Q 008975 376 VTLSKNLMAVAGDALKTNITT-LGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 454 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~-lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~ 454 (547)
.+.+.+.. .+. ..+.. .|+ +.+.++.... .+.++..+++ .....+|||+|++||+|+++++.+.+.
T Consensus 200 ~~~~~~~~---~~~--~~~~~~~~~------~~~~~~~~~~-~~~~~~~L~~-~gl~~~did~~~~h~~~~~~~~~~~~~ 266 (326)
T PRK05963 200 RPFAPERD---ASE--FLMTMQDGR------AVFTEAVRMM-SGASQNVLAS-AAMTPQDIDRFFPHQANARIVDKVCET 266 (326)
T ss_pred CCCccccc---ccc--cceEecCCH------HHHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHHH
Confidence 11111100 000 00000 011 1111111111 1222323322 233368999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 455 LQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 455 LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
||++++++ ..++++||||+|+|+++.|++++++|++++||+|++++||+|++++++++||
T Consensus 267 l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 267 IGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred cCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999998 5899999999999999999999999999999999999999999999999986
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.8e-47 Score=377.59 Aligned_cols=346 Identities=23% Similarity=0.297 Sum_probs=281.2
Q ss_pred eEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHH-HhCCceEEecCCcccCCCCC---cchHHHHHHHH
Q 008975 138 VYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILE-RSGLGDSTYLPEAVLNIPPN---PSMKEARKEAE 213 (547)
Q Consensus 138 v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~-~sGI~er~~~~~~~~~~~~~---~~ma~~r~ea~ 213 (547)
.+|.++++++|+ +++++.|+.+.+..... . +..+-+.|.+. ..+|.+|+..-|.+++..+. ..+.-+.|||.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~~-~-~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELPF-Q-EGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhcc-c-cchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 89999888877765332 2 23455566676 66888888776666553321 12446789999
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 293 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~ 293 (547)
.+.++|+++||+.+++.|+|||+|++.++++..+||+.++|+++||++++++.+.+.||||+||..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEccccCcccCCCCc-cccccccccccceEEEEEeccCCC--cccccceeeeEEEeeecCCCCcccceeeccCC
Q 008975 294 SYALVISMENITLNWYFGNDR-SKLVSNCLFRMGGAAILLSNRFSD--RRRSKYRLVHTVRTHKGADDNCFACVTQEEDS 370 (547)
Q Consensus 294 ~~aLVVstE~~S~~~~~~~dr-~~lv~~~lFGDGAAAvLLs~~~~~--~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~ 370 (547)
.+|||||.|.+|.++....+. +.+++..+||||+||++++.+... ....+..+.+..++ ...|+ +.++-+.-.
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-L~~ds---e~~Mgwdv~ 233 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-LYPDS---EDIMGWDVG 233 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccc-cCCcc---ccccceeec
Confidence 999999999999987765554 588999999999999999986542 22223334333222 22222 223333323
Q ss_pred CCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHH
Q 008975 371 EGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE 450 (547)
Q Consensus 371 ~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~ 450 (547)
+.+..+.+|+|+|......++.|+++ | +.. .+...+||++|+.|+||++++++
T Consensus 234 d~G~~~vlSrdlp~lIe~~l~~~V~~-------------f--------L~~------~~ls~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 234 DQGLKVVLSRDLPNLIESYLAPNVTT-------------F--------LAT------HGLSIEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred CCcEEEEEcCchhHHHHHHhhhhHHH-------------H--------HHH------cCCchhhhceeeeCCCCchHHHH
Confidence 33467889999999988888777653 1 111 12346899999999999999999
Q ss_pred HHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEec
Q 008975 451 LEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALR 519 (547)
Q Consensus 451 v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~ 519 (547)
+++.|||++|.++.||..|++|||+||++++|.|.+.++++ .++|.+.++.|||+||+...++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 799999999999999999999999975
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.4e-45 Score=388.04 Aligned_cols=335 Identities=18% Similarity=0.155 Sum_probs=242.8
Q ss_pred CCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHH
Q 008975 134 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAE 213 (547)
Q Consensus 134 ~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~ 213 (547)
+.++++|.++|.|+|+ ++++++++.+.... ++.+ ..+|+.+++||.+|+++.+++ ...
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~--~~~~i~~~~Gi~~R~~~~~~e----~~~---------- 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDIK--TLKRMKKVIGLNTRYICDENT----CVS---------- 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cchh--hhhhhhhccCceEEEeCCCCC----CHH----------
Confidence 4667999999999999 99999976543211 2222 236788999999999987654 224
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 292 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~ 292 (547)
+|+.+|+++||+++|++|+|||.||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 4559999999999999999999999986 56999999999999999999889999997 699999999999999999999
Q ss_pred CCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCC
Q 008975 293 NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEG 372 (547)
Q Consensus 293 ~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G 372 (547)
.+ +|||++|.+|+. .++.|+.. ..+|||||+|+||++++... . . ....++++.++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~~-~~~~d~~~---~~lFGDGAaA~vl~~~~~~~--~------~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSKF-IHPKNMNL---APIFGDGVSATLIEKTDFNE--A------F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhcc-CCcccCCc---eeeecccceEEEEEecCCCC--c------e--EEEEecCCCCCeEEecCCCcC
Confidence 88 999999999984 45566543 57999999999999755321 1 1 123467777777766543211
Q ss_pred ccccccch-h-hHHHhhhhh-hccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHH
Q 008975 373 KVGVTLSK-N-LMAVAGDAL-KTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD 449 (547)
Q Consensus 373 ~~g~~Lsk-d-l~~v~g~~l-k~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~ 449 (547)
..+..... + .+.. ++.. ...+...|+. -+.+..... .++++..++. .+...+|||+|++||+|+++++
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~------v~~~~~~~~-~~~i~~~L~~-~gl~~~did~~v~HQ~~~~i~~ 276 (353)
T PRK12880 206 IPKADIFNDDSLMQT-EEFRQLENLYMDGAN------IFNMALECE-PKSFKEILEF-SKVDEKDIAFHLFHQSNAYLVD 276 (353)
T ss_pred CCccccccccccccc-cccccCceEEEcCHH------HHHHHHHHH-HHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHH
Confidence 11110000 0 0000 0000 0000000111 111111111 1222222222 1223589999999999999999
Q ss_pred HHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEeccc
Q 008975 450 ELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSI 521 (547)
Q Consensus 450 ~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~~ 521 (547)
.+.++||++++++. ..++++||||||+|+++.|++..++|+++ +++++||+|++|+++++||.+=+
T Consensus 277 ~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~~~ 342 (353)
T PRK12880 277 CIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKDLY 342 (353)
T ss_pred HHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECCcC
Confidence 99999999999982 35689999999999999999999888764 99999999999999999995433
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.5e-45 Score=391.34 Aligned_cols=332 Identities=18% Similarity=0.209 Sum_probs=241.2
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV 215 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l 215 (547)
++++|+++|.|+|+ ++++|+++.+.++. ++++ |.+++||++|+++.+++ +. .+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~~------i~~~tGi~~R~~~~~~~----~~----------~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDEW------IATRTGIRNRRVLSGDE----TL----------TSL 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chhh------eecccCcceEeecCCCC----CH----------HHH
Confidence 46899999999999 99999999987652 3443 78999999999987654 22 355
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
+.+|+++||+++|++|+|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 6999999999999999999999998754323456789999999998 79999999 599999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
+|||++|.+|. +.+++|+.. ..+|||||+|+||++++... .++ ..+.+.++++.++.+..+..+....+
T Consensus 178 vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~----~~i---~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDE----DGL---LGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCC----Cce---EEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 455566654 35999999999999876432 122 22334455555544332211000000
Q ss_pred -cccchhhHHH-hhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHH
Q 008975 376 -VTLSKNLMAV-AGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 453 (547)
Q Consensus 376 -~~Lskdl~~v-~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k 453 (547)
..-..+.... ....-..++...|+. -+.+.... ..++++..++. .....+|||||++||+|+++++.+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~------v~~~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~ 318 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKE------VFKFAVRC-VPQVIESALQK-AGLTAESIDWLLLHQANQRIIDAVAQ 318 (379)
T ss_pred cccccccccccccccccccceEecCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 0000000000 000000012222211 11111111 12233333322 22235899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 454 NLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 454 ~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
.||++++++ ..++++||||+|+|+|+.|++++++|++++||+|++++||+||+|++++|+|
T Consensus 319 ~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 319 RLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999998 4789999999999999999999999999999999999999999999999986
No 19
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=1.1e-44 Score=376.73 Aligned_cols=321 Identities=17% Similarity=0.256 Sum_probs=238.9
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
.++|.++|.|+|+ ++++++|+.+.++. +++ +|.+++||++|++..+++ + ..+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~----~----------~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SDH------WISTRTGIKKRHLAPSST----S----------LTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCCC----C----------HHHHH
Confidence 5899999999999 99999999988752 333 477999999999887654 1 23566
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|+++||+++|++|+|||.||++|+ ++.. +..+..+++++|++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 34578899999998 68899999 599999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCc--
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGK-- 373 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~-- 373 (547)
+|||++|.+|. +.++.++.. ..+|||||+|+||++.+.. .+.+ ....++++.++.......+...
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~~---~~~fgDga~A~ll~~~~~~------~~~~---~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRKT---CILFGDGAGAAIIGASYEN------SILG---FKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCCc---eEEEcceeeEEEEEEcCCC------CeEE---EEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 445555542 5799999999999976542 1222 2334565555443221110000
Q ss_pred cccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHH
Q 008975 374 VGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 453 (547)
Q Consensus 374 ~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k 453 (547)
.+... .+. + .. ..+...|+. -+.+.+. ...++++..+++ .+...+|||||++||+|+++++.+++
T Consensus 200 ~~~~~---~~~--~-~~-~~~~~~g~~------~~~~~~~-~~~~~i~~~L~~-~g~~~~did~~~~hq~~~~~~~~~~~ 264 (326)
T CHL00203 200 FGTTK---LPQ--G-QY-QSISMNGKE------VYKFAVF-QVPAVIIKCLNA-LNISIDEVDWFILHQANKRILEAIAN 264 (326)
T ss_pred ccccc---ccc--C-Cc-ceEEECCHH------HHHHHHH-HHHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHH
Confidence 00000 000 0 00 011111111 1111111 112233333333 23346899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 454 NLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 454 ~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
.||++++++ ..++++||||+|+|+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 265 ~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 265 RLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 999999999 5799999999999999999999999999999999999999999999999998
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.6e-44 Score=371.48 Aligned_cols=321 Identities=19% Similarity=0.240 Sum_probs=243.5
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV 215 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l 215 (547)
.+++|.++|.|+|+ ++++++|+.+..+. +++ ++.+++||++|++..+++. ..+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~--------------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY--------------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC--------------HHHH
Confidence 46999999999999 99999999987642 344 3788999999999876641 2355
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNS 294 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~ 294 (547)
+.+|+++||+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 699999999999999999999999864 5788899999999999997 58999999 69999999999999999999999
Q ss_pred eEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCcc
Q 008975 295 YALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKV 374 (547)
Q Consensus 295 ~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~ 374 (547)
+||||++|.++. +.+..++.. .++|||||+|+||++++... ++ ..+...++++.++.++.+..
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~~---~~~~GDgAaA~ll~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~----- 197 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRTT---CILFGDGAGAVVLEATENEP-----GF---IDYVLGTDGDGGDILYRTGL----- 197 (325)
T ss_pred EEEEEEehhhcC-cCCccccCc---eEEEeecceEEEEEecCCCC-----Ce---EEEEEEEcCCCCCeEEEcCC-----
Confidence 999999999887 334445543 37899999999999876431 22 33445566666555544321
Q ss_pred ccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHH
Q 008975 375 GVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 454 (547)
Q Consensus 375 g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~ 454 (547)
|.....+ +... ...+...|. +.+.+.... ..+.++..+++ ....++|||+|++||+|+++++.+++.
T Consensus 198 ~~~~~~~-~~~~----~~~~~~~~~------~~~~~~~~~-~~~~i~~~L~~-~g~~~~did~~~~h~~~~~~~~~~~~~ 264 (325)
T PRK12879 198 GTTMDRD-ALSG----DGYIVQNGR------EVFKWAVRT-MPKGARQVLEK-AGLTKDDIDWVIPHQANLRIIESLCEK 264 (325)
T ss_pred CCCCCcc-cccc----CccEEEcCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 1111000 0000 000111010 111111111 11223333322 223368999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 455 LQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 455 LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
||++++++ ..++++|||++|+|+++.|++++++|++++||++++++||+|++++++++||
T Consensus 265 lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 265 LGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred cCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 99999998 4589999999999999999999999999999999999999999999999998
No 21
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.2e-44 Score=373.25 Aligned_cols=325 Identities=13% Similarity=0.171 Sum_probs=238.2
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV 215 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l 215 (547)
+.++|.++|.|+|+ ++++++++.+..+. +++ ++.+++||++|+++. ++ +.. +|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~----~~~----------~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE----TSS----------YM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC----CHH----------HH
Confidence 45899999999999 89999999987653 344 377899999999987 43 223 55
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCC-ceeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRG-NIISYNLGGMGCSAGLISIDLANNLLQVHPN 293 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~-~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~ 293 (547)
+.+|++++|+++|++|+|||.||+++ ++++..|+.+.+|++++|+++ ++.++|++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 69999999999999999999999986 467778999999999999985 47999999 5999999999999999999999
Q ss_pred CeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCc
Q 008975 294 SYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGK 373 (547)
Q Consensus 294 ~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~ 373 (547)
++||||++|..+. ..+..++.. ..+|||||+|+||++.+.. .++.+ ++..++++.++....+...
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~~---~~lfGDGAaA~ll~~~~~~-----~~il~---~~~~t~~~~~~~~~~~~~~--- 199 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNES---CILFGDGAAAVVITKGDHS-----SRILA---SHMETYSSGAHLSEIRGGG--- 199 (329)
T ss_pred CEEEEEEeccccC-CCCcccCcc---eEEEecccEEEEEEEcCCC-----CcEEE---EEEEEecCCCCceEEecCC---
Confidence 9999999999886 333344332 4789999999999986542 23332 2333444332221111100
Q ss_pred cccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHH
Q 008975 374 VGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK 453 (547)
Q Consensus 374 ~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k 453 (547)
...+-+.+.....+. + .+...|+ +...+.....+++++..+++ .....+|||+|++||+|+.+++.+++
T Consensus 200 ~~~~~~~~~~~~~~~-~--~~~~~~~-------~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~H~~~~~~~~~i~~ 268 (329)
T PRK07204 200 TMIHPREYSEERKED-F--LFDMNGR-------AIFKLSSKYLMKFIDKLLMD-AGYTLADIDLIVPHQASGPAMRLIRK 268 (329)
T ss_pred cCCCCcccccccccC-c--eEEECCH-------HHHHHHHHHHHHHHHHHHHH-cCCCHHHCCEEEeCCCCHHHHHHHHH
Confidence 000000000000000 0 0000011 11001111112333333333 23346899999999999999999999
Q ss_pred HcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 454 NLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 454 ~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
.||++++++ ..++++||||+|+|+++.|+++.++|++++||+|++++||+|++|+++++|+
T Consensus 269 ~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 269 KLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 999999998 5899999999999999999999999999999999999999999999999985
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.4e-44 Score=372.07 Aligned_cols=320 Identities=18% Similarity=0.183 Sum_probs=240.2
Q ss_pred CCCeEEEEEeEEcCCCCceecHHHHHHHhhhcC---CCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHH
Q 008975 135 PRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTG---TFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKE 211 (547)
Q Consensus 135 ~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~---~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~e 211 (547)
.++++|.++|.|+|+ ++++++++.+.+.... ..++ +++.+++||++|++.++++ +
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~----~---------- 60 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT----Q---------- 60 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC----C----------
Confidence 457999999999999 9999999998754311 1122 2367789999999976543 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|+++||+++|++++|||.||++++ +++..|+++.+|++++|+++++.+||+++ ||+|++.||++|.+++++
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~ 139 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIEL 139 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHc
Confidence 2356699999999999999999999999864 68889999999999999987799999995 999999999999999999
Q ss_pred CCCCeEEEEEEccccCcccCCC------Cc------cccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCC
Q 008975 291 HPNSYALVISMENITLNWYFGN------DR------SKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADD 358 (547)
Q Consensus 291 g~~~~aLVVstE~~S~~~~~~~------dr------~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~ 358 (547)
++.++||||++|..+.. +++. +. ...+...+|||||+|+||++++... ..+++.+. ...+++
T Consensus 140 g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~~---~~~~~~ 213 (338)
T PRK09258 140 GQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLGG---VTRAAT 213 (338)
T ss_pred CCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeeee---eeecCC
Confidence 99999999999998763 2211 11 1123357899999999999865422 12444432 223344
Q ss_pred CcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEE
Q 008975 359 NCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHF 438 (547)
Q Consensus 359 ~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f 438 (547)
+.++. ..+. ...+..+.+.+... +... ..++++..++. .....+|||+|
T Consensus 214 ~~~~~-~~~~------~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~L~~-~g~~~~did~~ 262 (338)
T PRK09258 214 EHHEL-CQGG------RDGMRTDAVGLLKE----------------------GVEL-AVDTWEAFLAQ-LGWAVEQVDRV 262 (338)
T ss_pred Ccccc-cccC------ccceEEcHHHHHHH----------------------HHHH-HHHHHHHHHHH-cCCCHHHCCEE
Confidence 33321 1110 01122222222111 1111 11233333322 22235799999
Q ss_pred EeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 439 CIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 439 ~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
++||+|+++++.+++.||++++++ ..++++||||+|+|+++.|++++++|++++||+|++++||+|++|+++++||
T Consensus 263 i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 263 ICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999999999 5788999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=4.6e-43 Score=366.19 Aligned_cols=328 Identities=16% Similarity=0.158 Sum_probs=241.6
Q ss_pred CCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHH
Q 008975 135 PRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEA 214 (547)
Q Consensus 135 ~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~ 214 (547)
|++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++|+.+|+++++++ +.. +
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~----~~~----------~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPED----HTS----------D 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCC----CHH----------H
Confidence 568999999999999 89999999887653 443 366889999999987654 223 4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc--CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc-C
Q 008975 215 VMFGAIDELFAKTSVKPKDIGILIVNCS--LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV-H 291 (547)
Q Consensus 215 l~~~Aa~~aL~kagi~p~dID~LIv~~s--~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s-g 291 (547)
|+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 5599999999999999999999997643 4778999999999999997 78999999 5999999999999999999 6
Q ss_pred CCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCC
Q 008975 292 PNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSE 371 (547)
Q Consensus 292 ~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~ 371 (547)
..+++|||++|..+. +.+..++.... ...|||||+|+||++.+.. ++++ .+...++++.++.+..+.+
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~-- 201 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NRIL---GSAIITDGSFSEDVRVPAG-- 201 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCeee-eccCCCceeEEEEEecCCC-----CceE---EEEEEEcCCccceEEecCC--
Confidence 678999999999877 33333333210 1248999999999976542 3443 3445567666665544322
Q ss_pred CccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHH----HHHHHHHHhhhccccccccccccEEEeccCCHHH
Q 008975 372 GKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFAT----LVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV 447 (547)
Q Consensus 372 G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~----~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~v 447 (547)
....+.+.+.... ++. .+...+| +.+...+. ....++++..+++ .....+|||+|++||+|+++
T Consensus 202 -g~~~~~~~~~~~~-~~~---~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~L~~-~gl~~~did~~~~h~~~~~~ 269 (339)
T PRK06840 202 -GTKQPASPETVEN-RQH---YLDVIDP------ESMKERLDEVSIPNFLKVIREALRK-SGYTPKDIDYLAILHMKRSA 269 (339)
T ss_pred -CcCCCCccccccc-ccc---eEEEcCc------HHHHHHhHhhHHHHHHHHHHHHHHH-cCCCHHHCCEEEECCcCHHH
Confidence 1111221111000 000 0000011 00110000 0012333333332 22336899999999999999
Q ss_pred HHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEe
Q 008975 448 LDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKAL 518 (547)
Q Consensus 448 l~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~ 518 (547)
++.+++.||++++++ .++.+||||+|+|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 270 ~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 270 HIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999999997 2689999999999999999999999999999999999999999999999984
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=8.2e-43 Score=359.77 Aligned_cols=319 Identities=20% Similarity=0.284 Sum_probs=241.4
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
+++|.++|+|+|+ ++++++++.+..+. +++ ++.+++|+++|+++++++ +.. +|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~~----~~~----------~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SDE------WIRTRTGIRERRIADPGE----TTS----------DLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCCC----CHH----------HHH
Confidence 4799999999999 89999999998743 333 477899999999998654 223 455
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|++++|+++|++|+|||.+|++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 5667899999999999997 79999999 699999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
+|||++|.++.. .+..++. ...+|||||+|+||++.+.. +++.+ ++..++++.++.+..+..+..
T Consensus 133 vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~~---~~~~~~~~~~~~~~~~~~~~~--- 197 (320)
T cd00830 133 VLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----PGILD---SVLGSDGSGADLLTIPAGGSR--- 197 (320)
T ss_pred EEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----CcEEE---EEEEEcCCCCCeEEeCCCCcC---
Confidence 999999998873 3334443 25799999999999987642 33433 344566666666554432110
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHc
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 455 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~L 455 (547)
.+. +..... ...+...++.+ +..+.. ..+++++..++. .+..++|||+|++||+|+++++.+++.|
T Consensus 198 ~~~--~~~~~~----~~~~~~~~~~~------~~~~~~-~~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 263 (320)
T cd00830 198 SPF--EDAEGG----DPYLVMDGREV------FKFAVR-LMPESIEEALEK-AGLTPDDIDWFVPHQANLRIIEAVAKRL 263 (320)
T ss_pred Ccc--cccccc----CccEEEcChHH------HHHHHH-hhHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHh
Confidence 000 000000 00011111100 001111 112233333332 2333689999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEE
Q 008975 456 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 515 (547)
Q Consensus 456 gL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~ 515 (547)
|++++++ ..++++|||++|+|+++.|++++++|++++||++++++||+|++|+++++
T Consensus 264 gl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 264 GLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 9999998 57999999999999999999999999999999999999999999998874
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.7e-42 Score=358.27 Aligned_cols=316 Identities=20% Similarity=0.264 Sum_probs=242.3
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
.++|.++++|+|+ ++++++++.+..+. +++ ++.+++|+++|++..+++ +.. +|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~----~~~----------~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SDE------WIVTRTGIKERRIAADDE----TSS----------TMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----chH------HeecccCceEEEECCCCC----CHH----------HHH
Confidence 4899999999999 89999999987653 332 377889999999887665 223 456
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|++++|+++|++|+|||.+|++++ +++..|+.+.++++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999864 6777899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
+|||++|..+. +.++.++.. ..+|||||+|+||++++... + +.++...++++.++..+.+.+....
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~~---~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRGT---CVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPT-- 199 (318)
T ss_pred EEEEEehhhcC-cCCcCCCCe---EEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCC--
Confidence 99999999876 344455543 36899999999999876432 2 3344555666666665554331100
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHc
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 455 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~L 455 (547)
..+ . ......++. -+..+... ..++++..++. ...-.+||+||++||+++++++.+++.|
T Consensus 200 --~~~-------~---~~~~~~~~~------~~~~~~~~-~~~~~~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~l 259 (318)
T TIGR00747 200 --SGP-------S---PFITMEGNE------VFKHAVRK-MGDVVEETLEA-NGLDPEDIDWFVPHQANLRIIEALAKRL 259 (318)
T ss_pred --CCC-------C---CceEECCHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHHc
Confidence 000 0 000011110 01111111 11223322222 1222579999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 456 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 456 gL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
|++++|+. .++++|||++|+|+++.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 260 gi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 260 ELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred CCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999994 789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.8e-41 Score=347.29 Aligned_cols=316 Identities=21% Similarity=0.272 Sum_probs=241.4
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV 215 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l 215 (547)
..|+|.++++|+|+ ++++++++.+..+. +++ +|.+++|+++|+++.+++. ..+|
T Consensus 2 ~~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~~~--------------~~~l 55 (319)
T PRK09352 2 MYAKILGTGSYLPE--RVVTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPDET--------------TSDL 55 (319)
T ss_pred CceEEEEEEEECCC--eEEcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCCCC--------------HHHH
Confidence 46899999999999 99999999988653 332 4778999999988765541 2356
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNS 294 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~ 294 (547)
+.+|++++|+++|++|+|||.+|++++ ++...|+.+..|++++|++ ++.+++++ +||++++.||.+|.+++++|+.+
T Consensus 56 a~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~ 133 (319)
T PRK09352 56 ATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYK 133 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCC
Confidence 699999999999999999999999865 5666899999999999996 78999999 69999999999999999999999
Q ss_pred eEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCcc
Q 008975 295 YALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKV 374 (547)
Q Consensus 295 ~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~ 374 (547)
++||+++|.++. ++...++.. ..+|||||+|+||++++.. ++ ..++..++++.++.+..+.++...
T Consensus 134 ~vLvv~~e~~s~-~~~~~~~~~---~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~- 199 (319)
T PRK09352 134 NVLVIGAEKLSR-IVDWTDRST---CVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG- 199 (319)
T ss_pred EEEEEEehhhcc-ccCcccCCc---eEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC-
Confidence 999999999886 334445443 3699999999999987642 12 233444566555544443321100
Q ss_pred ccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHH
Q 008975 375 GVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKN 454 (547)
Q Consensus 375 g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~ 454 (547)
+.+. ..+...|. +.+..+... ..++++..+++ .....+|||||++|++|+.+++.+++.
T Consensus 200 --~~~~-----------~~~~~~~~------~~~~~~~~~-~~~~i~~~l~~-~g~~~~di~~~~~h~~~~~~~~~~~~~ 258 (319)
T PRK09352 200 --PASP-----------GYLRMEGR------EVFKFAVRE-LAKVAREALEA-AGLTPEDIDWLVPHQANLRIIDATAKK 258 (319)
T ss_pred --CCCC-----------CceEECCH------HHHHHHHHH-HHHHHHHHHHH-cCCCHHHCCEEEECCCCHHHHHHHHHH
Confidence 0000 00000010 001111111 12334433333 222357999999999999999999999
Q ss_pred cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEE
Q 008975 455 LQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 455 LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~ 517 (547)
||++.+++ ..++++|||++|+|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 259 lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 259 LGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred hCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=353.85 Aligned_cols=311 Identities=18% Similarity=0.175 Sum_probs=231.6
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
.++|.++|.|+|+ ++++++++.+..+. ++++ +.+++||++|+++++++ +.. +|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~~------i~~~~Gi~~R~~~~~~~----~~~----------~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPEA------IKRGLGVEEKSVPGPDE----DTA----------TIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHHH------HhhccCeeeeecCCCCc----CHH----------HHH
Confidence 5899999999999 99999999988753 5554 78899999999987665 223 455
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|+++||+++|++|+|||.||+++ ++++..|+.+.+|++++|+++++.++|++ +||++++.||++|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46778899999999999998678999998 599999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
||||++|... ....++. ...|||||+|+||++.+. ..++.+.... .+|. .+.+..+.......+
T Consensus 135 aLVv~~e~~~---~~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~~--~~d~--~d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQ---GAPGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYSY--TTDT--PDFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeec---cCCCCCC----CCcCCCCcEEEEEecCcc-----cceeeccccc--cccc--hhhcCCCCCcCCCcC
Confidence 9999999842 2223432 246899999999997432 2334332111 1221 111111000000000
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHc
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 455 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~L 455 (547)
...+++ + .++.. ..++++..++. .....+|||+|++||+|+++++.+++.|
T Consensus 199 ~~~~~~-~--------------------------~~~~~-~~~~i~~~L~~-~gl~~~dId~~v~Hq~n~~~~~~~~~~L 249 (347)
T PRK04262 199 GRFTGE-P--------------------------AYFKH-IISAAKGLMEK-LGLKPSDYDYAVFHQPNGKFPLRVAKML 249 (347)
T ss_pred ceecch-H--------------------------HHHHH-HHHHHHHHHHH-hCcCHHHhceeecCCCchHHHHHHHHHc
Confidence 000000 0 01110 11222222222 1223589999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEecccC
Q 008975 456 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSIN 522 (547)
Q Consensus 456 gL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~~~ 522 (547)
|++++++..+. ++++||||||+|+|+.|+++.+ ++++||+|++++||+|+++.+.+||+.+...
T Consensus 250 gl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 250 GFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred CCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 99999996443 6899999999999999999987 4899999999999999999999999976654
No 28
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.7e-40 Score=352.51 Aligned_cols=346 Identities=16% Similarity=0.159 Sum_probs=236.3
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
+++|.++|+|+|+ ++++|+++.+.++......+ ...++|++++||++|+++.++... +.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~--~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGR--PTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCC--CCC-------CHHHHH
Confidence 5899999999999 89999999988764321111 122579999999999987543210 111 235777
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|+++||+++|++|+|||.||++| ++++..|+.+..|++++|++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999986 46788899999999999998 58899998 699999999999999999999999
Q ss_pred EEEEEEccccCcccCCCC------------c--cc----cccccccccceEEEEEeccCCCcccccceeeeEEEeeecCC
Q 008975 296 ALVISMENITLNWYFGND------------R--SK----LVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGAD 357 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~d------------r--~~----lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd 357 (547)
||||++|.+|..+ ++.+ + .. -..+++|||||+|+||++.+... ...+ ++...+..++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998743 2111 1 00 01135799999999999866421 1111 1111122222
Q ss_pred CCcccceeeccCC---CC-ccccc-cchhhHHHhhh-hhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccc
Q 008975 358 DNCFACVTQEEDS---EG-KVGVT-LSKNLMAVAGD-ALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDF 431 (547)
Q Consensus 358 ~~~~~~v~~~ed~---~G-~~g~~-Lskdl~~v~g~-~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~ 431 (547)
...++.++..... ++ ..+.. .+.+.+...+. .++.+... + .+ ++.. ...+.++..++. ....
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~---~~~~-~~~~~i~~~L~~-~gl~ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL----L---NE---NIVV-YTIKPLLELVDK-RNLD 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH----H---HH---HhHH-HHHHHHHHHHHH-cCCC
Confidence 2222222111000 00 00000 00010000000 00000000 0 00 0000 001122222222 1233
Q ss_pred cccccEEEeccCCHHHHHHHHHHc-----CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecc
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNL-----QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGS 506 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~L-----gL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGs 506 (547)
.+|||+|++||+|.++++.+.++| |++++|+ ..++++||||+|||+|+.|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 689999999999999999999987 8999998 68999999999999999999999999999999999998887
Q ss_pred h-hhheeEEEEEe
Q 008975 507 G-FKCNSAVWKAL 518 (547)
Q Consensus 507 G-~~~~sav~r~~ 518 (547)
| +.++.+++.|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999874
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=1.3e-40 Score=349.31 Aligned_cols=319 Identities=17% Similarity=0.181 Sum_probs=233.7
Q ss_pred eEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHHH
Q 008975 138 VYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 217 (547)
Q Consensus 138 v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~~ 217 (547)
+.|.++|.|+|+ ++++|+++.+..+. ++++ +.+++||++|+++++++ +..+| +.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~~------i~~~~Gi~~r~v~~~~~----~~~~l----------a~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPES------ISNGLPVEEKAVPGLDE----DTATI----------GV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHhH------eeeccceeeeecCCCCC----CHHHH----------HH
Confidence 679999999999 99999999887653 4554 67899999999997765 23444 59
Q ss_pred HHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeE
Q 008975 218 GAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 296 (547)
Q Consensus 218 ~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~a 296 (547)
+|+++||+++|++|+|||.||++++ +++..|+.+..+++++|+++++.++|++ .||+|++.||++|.+++++|..+++
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 9999999999999999999999864 6777899999999999998789999999 5999999999999999999999999
Q ss_pred EEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCC-cccceeeccCCCCccc
Q 008975 297 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDN-CFACVTQEEDSEGKVG 375 (547)
Q Consensus 297 LVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~-~~~~v~~~ed~~G~~g 375 (547)
|||++|..+. ...|+. ...|||||+|+||++.+.. .++.+.. ...+|+. .++. . +
T Consensus 135 LVv~~d~~~~---~~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~----~---~--- 190 (345)
T TIGR00748 135 LAIGADTAQG---APGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRR----E---G--- 190 (345)
T ss_pred EEEEEeeccc---CCCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceeccccccccc----C---C---
Confidence 9999999764 223332 2578999999999965421 1222211 1112211 1110 0 0
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHc
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 455 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~L 455 (547)
.. .+...++ + .+ ..+-+.+... ..+++++. .....+|||+|++||+|+++++.+.+.|
T Consensus 191 ~~----~~~~~~~-~------~~-----~~~~~~~~~~-~~~~~L~~-----~gl~~~did~~i~Hq~~~~~~~~~~~~l 248 (345)
T TIGR00748 191 EP----YPRHGGR-F------TG-----EPAYFHHVVT-AAKGLMEK-----LGLTPEDFDYAVFHQPNGKFYLVAARML 248 (345)
T ss_pred Cc----CCCcCCe-e------cC-----hHHHHHHHHH-HHHHHHHH-----cCCCHHHcCEEEeCCCChHHHHHHHHHc
Confidence 00 0000000 0 00 0000111111 11233332 2223579999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEecccCCcccCCCCccccc
Q 008975 456 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSINSAKEKNPWMDEIH 535 (547)
Q Consensus 456 gL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~~~~~~~~~~w~~~i~ 535 (547)
|++++++..+ ...++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|.+..... .+|+--|+
T Consensus 249 gl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~~---~~~~~~~~ 322 (345)
T TIGR00748 249 GFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEEK---RDLAPKVA 322 (345)
T ss_pred CCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHHH---hhhhhhHH
Confidence 9999998421 13489999999999999999986 689999999999999999999999998766543 46864343
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.7e-39 Score=343.85 Aligned_cols=349 Identities=14% Similarity=0.172 Sum_probs=236.1
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcC-CCChHh---HH----------HHHHHHHHhCCceEEecCCcc----c
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTG-TFTEEN---LQ----------FQKKILERSGLGDSTYLPEAV----L 197 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~-~~~~~~---~~----------f~~rI~~~sGI~er~~~~~~~----~ 197 (547)
++++|+++|+|+|+ ++++|+++.++++... .|.++. +. -.++|.+++||++|+++.+.. .
T Consensus 1 ~~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 36899999999999 8999999998754211 111000 00 124588899999999875321 0
Q ss_pred CCCCC--cchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccc
Q 008975 198 NIPPN--PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGC 274 (547)
Q Consensus 198 ~~~~~--~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgC 274 (547)
..++. .........+.+|+.+|+++||+++|++|+|||.||++|+ +++..|+.+.+|+++||++ ..+++++ +||
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 00110 0011111345789999999999999999999999999875 5778999999999999996 5789998 699
Q ss_pred hHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeee
Q 008975 275 SAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHK 354 (547)
Q Consensus 275 sggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~ 354 (547)
++++.||.+|.+++++|..++||||++|.++.. .+..|++. ..+|||||+|+||++.+....+..|++++.. .
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRDS---HFIFGDVATAVIVERADTATSAGGFEILGTR---L 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCCC---CEEecCccEEEEEeeccccccCCCceEEEEE---e
Confidence 999999999999999999999999999998863 34456543 4799999999999986543222345555432 1
Q ss_pred cCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhcccccccccc
Q 008975 355 GADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLA 434 (547)
Q Consensus 355 ~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~d 434 (547)
.++ ..+.+..+. |. +.+...+-+.... .++..-|+. .+.++... ..+.++.+++. .....+|
T Consensus 229 ~~~--~~~~~~~~~---G~-~~~~~~~~~~~~~----~~~~~~g~~------~~~~~~~~-~~~~i~~~L~~-~gl~~~d 290 (372)
T PRK07515 229 FTQ--FSNNIRNNF---GF-LNRADPEGIGARD----KLFVQEGRK------VFKEVCPM-VAEHIVEHLAE-NGLTPAD 290 (372)
T ss_pred ecc--cccceecCC---CC-CCCCCcccccccc----ceEEeccHH------HHHHHHHH-HHHHHHHHHHH-cCCCHHH
Confidence 121 111111110 10 0000000000000 001101110 01111111 12233333332 2333689
Q ss_pred ccEEEeccCCHHHHHHHHHH-cCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeE
Q 008975 435 FEHFCIHAGGRAVLDELEKN-LQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSA 513 (547)
Q Consensus 435 id~f~~H~~gr~vl~~v~k~-LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sa 513 (547)
||+|++||+|+++++.+.++ ||++.+. +.++.++++||||+|+|+++.|+++. +++++||+|++++||+|++|+++
T Consensus 291 Id~~~~Hq~~~~~~d~~~~~llg~~~~~-~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~ 367 (372)
T PRK07515 291 VKRFWLHQANINMNQLIGKKVLGRDATP-EEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSV 367 (372)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCCCh-hhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHH
Confidence 99999999999999999998 5754432 22368999999999999999999884 57899999999999999999999
Q ss_pred EEEE
Q 008975 514 VWKA 517 (547)
Q Consensus 514 v~r~ 517 (547)
++|.
T Consensus 368 ll~~ 371 (372)
T PRK07515 368 IVRK 371 (372)
T ss_pred Hhcc
Confidence 9874
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=1.8e-38 Score=328.07 Aligned_cols=321 Identities=20% Similarity=0.238 Sum_probs=233.2
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
.++|.++|+|+|+ ++++++++.+..+. + ++.++.|+++|++..+++ +.. +|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~----~~~----------~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE----DVP----------TMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC----CHH----------HHH
Confidence 4789999999999 99999999987653 1 266789999999986533 123 456
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|++++|+++|++|+|||.||++++ +....|+.+.+|++++|++ ++.+++++ +||++++.|+.+|.+++++|+.++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999865 5556889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
+|||++|.++.... ..++ ..++|||||+|+||++.+.. ..+++.. ++..+++..+++.. +. .+
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~~---~~~~~~~~~~~~~~-~~-----~~ 193 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIVS---THSTSDPGYDFSPY-PV-----MD 193 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCcee---eeeecccccccCcc-ce-----ec
Confidence 99999999887432 1222 25799999999999987642 1234433 34444544332100 00 00
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCH-HHHHHHHHH
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGR-AVLDELEKN 454 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr-~vl~~v~k~ 454 (547)
.......-......+..+ +.. .+-...... ...++++..+++ .... +|+|+|++||+|+ .+++.+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~-~~~~~~~~~l~~-~~~~-~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 194 GGYPKPCKLAYAIRLTAE----PAG----RAVFEAAHK-LIAKVVRKALDR-AGLS-EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred cCCCcchhhhhhcceeec----CCc----cchHHHHhH-HHHHHHHHHHHH-cccc-cccceeeccCchHHHHHHHHHHH
Confidence 000000000000001000 000 000001111 112333333332 1111 6899999999999 999999999
Q ss_pred cCCCccccccccc-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEE
Q 008975 455 LQLSDWHMEPSRM-TLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW 515 (547)
Q Consensus 455 LgL~~e~~e~S~~-tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~ 515 (547)
|+++++++.+++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976664 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=7.7e-35 Score=309.34 Aligned_cols=308 Identities=16% Similarity=0.151 Sum_probs=220.9
Q ss_pred eEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHHH
Q 008975 138 VYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMF 217 (547)
Q Consensus 138 v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~~ 217 (547)
|+|.+++.|+|+ ++++++++.+..+. +++ ++....|++++++.++++ +..+| +.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~e----d~~~l----------a~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDE----DIVTM----------AA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCC----CHHHH----------HH
Confidence 579999999999 99999999987653 554 367789999999887665 22445 59
Q ss_pred HHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeE
Q 008975 218 GAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYA 296 (547)
Q Consensus 218 ~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~a 296 (547)
+|+++||+++ +|+|||.||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 56777899999999999998889999999 5999999999999999999999999
Q ss_pred EEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEE-EeeecCCCCcccceeeccCCCCccc
Q 008975 297 LVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTV-RTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 297 LVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v-~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
|||++|+... .. .+.. ..+|||||+|+||++.+. +..+. .+...+++. ++ .+++...
T Consensus 132 LVv~~D~a~~--~~-~~~~----~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~d-f~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ESPG----EPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MD-FWRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CCCC----CccccCccEEEEEecCCC--------eeEEeccceeeecCC-CC-ccCCCCC-----
Confidence 9999998432 11 1111 368999999999997542 11111 011112211 11 1122110
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHH----HHHH
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV----LDEL 451 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~v----l~~v 451 (547)
+.|.+.|+ .....|+... .++++..++. .+...+|||+||+||++.++ ++.+
T Consensus 190 -----~~~~v~g~-----------------~s~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 190 -----TTALVDGQ-----------------YSNEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred -----CceeECcH-----------------HHHHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 01111111 0111222211 2333332222 23346899999999997766 3345
Q ss_pred HHHcCCCc-----ccccccccccccccccccchHHHHHHHHHHcC-CCCCCCEEEEEEecchhhheeEEEEEecc
Q 008975 452 EKNLQLSD-----WHMEPSRMTLYRFGNTSSSSLWYELAYSEAKG-RIKKGDRTWQIAFGSGFKCNSAVWKALRS 520 (547)
Q Consensus 452 ~k~LgL~~-----e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~g-ri~~GDrVlliafGsG~~~~sav~r~~~~ 520 (547)
.+.++++. +.+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+..+.
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~~ 320 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVAG 320 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEccc
Confidence 56677763 23345667899999999999999999999886 89999999999999998877777766543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=7.8e-33 Score=298.20 Aligned_cols=312 Identities=16% Similarity=0.225 Sum_probs=219.9
Q ss_pred CCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEec--CCcccCCCCCcchHHHHHH
Q 008975 134 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYL--PEAVLNIPPNPSMKEARKE 211 (547)
Q Consensus 134 ~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~--~~~~~~~~~~~~ma~~r~e 211 (547)
+|+++.|.++|.|+|+ ++++++++.++.+. +++| + ++||++|++. +++| +..+|+
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~~------~--~~GI~~r~~ava~~~E----d~~tmA----- 57 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKGK------Y--TIGLGQDCMAFCTDVE----DVISMS----- 57 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHHH------H--hhccceeEeccCCCCC----CHHHHH-----
Confidence 4788999999999999 99999999988764 6665 3 5899999864 3444 234555
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHH---HHcCCCCceeEEEecCccchHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVI---NHYKLRGNIISYNLGGMGCSAGLISIDLANNL 287 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~---~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~l 287 (547)
.+|++++|+++|++|++||.||++| ++++..|+.|..|+ +++|.+ ++.+||++ .+|+||+.||++|.++
T Consensus 58 -----~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 58 -----LTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred -----HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 9999999999999999999999997 56788999999886 678876 89999999 5999999999999999
Q ss_pred HhcCC--CCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCC-cccce
Q 008975 288 LQVHP--NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDN-CFACV 364 (547)
Q Consensus 288 L~sg~--~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~-~~~~v 364 (547)
++++. .++||||++|+.+... . ..+ ..+||||+|+||+..+.. .+... ..++... .|+ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~-~-~~e------~t~GdGA~A~lv~~~~~~------~l~~~---~~g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAE-G-PAR------PTGGAGAVAMLVGPNAPI------VFESK---YRGSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccC-C-CCC------CCCCcceEEEEEccCCCc------eeecc---cccccCcccch-h
Confidence 99986 5999999999966421 1 122 356999999999864421 11111 1111111 122 2
Q ss_pred eeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccc-----cccccccccEEE
Q 008975 365 TQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPY-----IPDFKLAFEHFC 439 (547)
Q Consensus 365 ~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~-----ip~~~~did~f~ 439 (547)
+++... .+.|.+.|+ +.+.+|+... .++++...+.. .+...+|||+||
T Consensus 193 ~rP~~~---------~~~~~vdG~-----------------~s~~~yl~~~-~~~~~~~~~k~~~~~~~g~~~~d~d~~v 245 (459)
T PLN02577 193 YKPDLA---------SEYPVVDGK-----------------LSQTCYLMAL-DSCYKRFCEKYEKLEGKQFSISDADYFV 245 (459)
T ss_pred cccCCC---------CCceEEcch-----------------HHHHHHHHHH-HHHHHHHHHHhhcccccCCCHHHcCEEE
Confidence 232210 011222221 1122333221 12222211111 022468999999
Q ss_pred eccCCHHHHHHHHHHcCCC----------------------------------------------ccccccccccccccc
Q 008975 440 IHAGGRAVLDELEKNLQLS----------------------------------------------DWHMEPSRMTLYRFG 473 (547)
Q Consensus 440 ~H~~gr~vl~~v~k~LgL~----------------------------------------------~e~~e~S~~tl~r~G 473 (547)
+||+..++...-.+.|.+. .++++||...-++.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999777766655444311 167777877888999
Q ss_pred ccccchHHHHHHHHHHcCC-CCCCCEEEEEEecchhhheeEEEEEecc
Q 008975 474 NTSSSSLWYELAYSEAKGR-IKKGDRTWQIAFGSGFKCNSAVWKALRS 520 (547)
Q Consensus 474 NtsSaSi~~~La~~~~~gr-i~~GDrVlliafGsG~~~~sav~r~~~~ 520 (547)
|+.++|++..|..+++... ..+|+||.++++|||......-.+....
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 9999999999999997643 4599999999999998887777766643
No 34
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=3.7e-31 Score=260.29 Aligned_cols=203 Identities=22% Similarity=0.305 Sum_probs=162.3
Q ss_pred hcCCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCCh--HhHHHHHHHHHHhCCceEEecCCccc-C------CCCC
Q 008975 132 LTRPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTE--ENLQFQKKILERSGLGDSTYLPEAVL-N------IPPN 202 (547)
Q Consensus 132 ~~~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~--~~~~f~~rI~~~sGI~er~~~~~~~~-~------~~~~ 202 (547)
.+.+.+.+|+++|+..|+ ++++++++.+.+.+....++ +..++++||++++||++|+..-+.++ . ....
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456778999999999999 99999999987432222232 44577899999999999986643211 0 0111
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHH
Q 008975 203 ----PSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGL 278 (547)
Q Consensus 203 ----~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl 278 (547)
..|+.+.+++.+|+.+|++++|+++|++++|||+||+.|++....|++..+++++|||++++..+.|++|||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 2366788999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEEccccCcccCCC--CccccccccccccceEEEEEeccC
Q 008975 279 ISIDLANNLLQVHPNSYALVISMENITLNWYFGN--DRSKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 279 ~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~--dr~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
.+|..|+++.+++|..+||||+.|.+|.+|..++ +++.++++++|||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998776433 467889999999999999998764
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.97 E-value=3.2e-30 Score=267.50 Aligned_cols=313 Identities=19% Similarity=0.208 Sum_probs=236.2
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVM 216 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~ 216 (547)
.+.|++++.|.|. ++++.+|+.+..+. +++ |+...+|++++.+.+.+| ...+|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E----D~vTma---------- 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE----DAVTMA---------- 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch----hHHHHH----------
Confidence 5899999999999 99999999987652 443 578889999999988776 334555
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
++||+++|++.++||++|+.|+++| |..+...+.|..|++.+|+.+++.++|+.+ +|-+|+.||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999997 567778899999999999999999999995 99999999999999999999999
Q ss_pred EEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccc
Q 008975 296 ALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVG 375 (547)
Q Consensus 296 aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g 375 (547)
+|||++|+. + |...+.- -...|+||+|+|++..+... .++.... +++..-.+.| ++++.
T Consensus 135 ~LvI~sD~a-~--~~~~~~~----E~t~GAGavA~lIg~n~~~~----a~~~~~~-syt~d~~DFw----Rp~~~----- 193 (377)
T COG3425 135 GLVIGADTA-Q--YAPGDAL----EYTAGAGAVAFLIGKNPPIV----AEFEGTG-SYTTDTPDFW----RPDGQ----- 193 (377)
T ss_pred eEEEeehhh-c--cCCCccc----CccCCCceEEEEEccCCCeE----EEecCce-EEecCCCccc----ccCCC-----
Confidence 999999984 2 2222222 25789999999999854321 1111111 1111111233 33221
Q ss_pred cccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHc
Q 008975 376 VTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL 455 (547)
Q Consensus 376 ~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~L 455 (547)
..|.+.|+. |++ .|++.+ .+.++.-.+. .+...+|||++|+|+++.++-....+.+
T Consensus 194 -----~yp~~dg~~---------------s~~--~Y~~~~-~~a~~~~~~k-~gls~~dfdy~vfH~P~~k~~~ka~k~l 249 (377)
T COG3425 194 -----PYPYVDGRF---------------SEP--AYFKHV-ENAAKGYMEK-TGLSPDDFDYIVFHQPNGKFPKKAAKSL 249 (377)
T ss_pred -----cccccCcee---------------cHH--HHHHHH-HHHHHHHHHH-hCCChhhhCeEEecCCCCchHHHHHHHh
Confidence 123333321 111 222211 1112111111 1223689999999999999999999999
Q ss_pred CCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhheeEEEEEecccC
Q 008975 456 QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSIN 522 (547)
Q Consensus 456 gL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~sav~r~~~~~~ 522 (547)
+.+.+++.|+....++.||+.|+|+++.|+.+++..+ .+||||++.+||||......-......+.
T Consensus 250 ~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 250 GFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred CccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 9999999999989999999999999999999998766 79999999999999877766666666554
No 36
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=3.7e-30 Score=277.15 Aligned_cols=312 Identities=16% Similarity=0.214 Sum_probs=213.4
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEE--ecCCcccCCCCCcchHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDST--YLPEAVLNIPPNPSMKEARKEAEA 214 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~--~~~~~~~~~~~~~~ma~~r~ea~~ 214 (547)
+|+|.+++.|+|+ ++++++++.++.+. ++++ + .+||++|+ +.++++ +..+|
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~k------~--~~GI~~rr~av~~~~E----d~~tm--------- 53 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAGK------Y--TIGLGQTKMGFCTDRE----DINSL--------- 53 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHHH------h--eechhheecccCCCCC----CHHHH---------
Confidence 5899999999999 99999999887653 5543 3 58999998 455544 23444
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCC--CCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 215 VMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKL--RGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 215 l~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl--~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
+.+|++++|++++++|++||.||++| ++++..|+.+..|++.||+ .+++.+||+. .+|+|++.||.+|.++++++
T Consensus 54 -a~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~fDi~-~AC~G~t~AL~~A~~~i~s~ 131 (454)
T TIGR01833 54 -CLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTT-NACYGGTAALFNAINWIESS 131 (454)
T ss_pred -HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCceEEecc-ccchhHHHHHHHHHHHHHcC
Confidence 59999999999999999999999997 6788999999999995543 2489999999 59999999999999999988
Q ss_pred C--CCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccC
Q 008975 292 P--NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEED 369 (547)
Q Consensus 292 ~--~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed 369 (547)
. .++||||++|+. . |. +.+. ..++||||+|+||+..+.- .++. ++..++.....+.|+ |..
T Consensus 132 ~~~~~~aLVV~sDia-~--y~--~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~~ 194 (454)
T TIGR01833 132 SWDGRYALVVAGDIA-V--YA--KGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PDL 194 (454)
T ss_pred CcCCCeEEEEEeccc-c--cc--CCCe---eeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CCC
Confidence 5 699999999993 2 22 2222 2478999999999976641 0111 001122222222332 211
Q ss_pred CCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHH------HHHHHhhhccc---cccccccccEEEe
Q 008975 370 SEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVG------KKLFKMKIKPY---IPDFKLAFEHFCI 440 (547)
Q Consensus 370 ~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~------r~v~~~a~~~~---ip~~~~did~f~~ 440 (547)
..+.|.+.|+ +|-+ .|+.... ++....+++.. .....+|||++|+
T Consensus 195 ---------~~~~p~vdg~---------------~S~~--~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~~dfd~~~f 248 (454)
T TIGR01833 195 ---------ASEYPVVDGK---------------LSIQ--CYLSALDRCYKSYCKKIEKQWGKSGGDRKFTLNDFDYMVF 248 (454)
T ss_pred ---------CCcccccCCc---------------cCHH--HHHHHHHHHHHHHHHHHHHhhhhhccccCCCHhHcCEEec
Confidence 0112222221 0100 1111100 11111111111 0123579999999
Q ss_pred ccCCHHHHHHH-HHHc---------------------------------------------CCCcccccccccccccccc
Q 008975 441 HAGGRAVLDEL-EKNL---------------------------------------------QLSDWHMEPSRMTLYRFGN 474 (547)
Q Consensus 441 H~~gr~vl~~v-~k~L---------------------------------------------gL~~e~~e~S~~tl~r~GN 474 (547)
|++..++.... .+.+ +...++++||...-++.||
T Consensus 249 H~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN 328 (454)
T TIGR01833 249 HSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGN 328 (454)
T ss_pred cCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCc
Confidence 99965555443 2221 1122678888777779999
Q ss_pred cccchHHHHHHHHHHcCC--CCCCCEEEEEEecchhhheeEEEEEecc
Q 008975 475 TSSSSLWYELAYSEAKGR--IKKGDRTWQIAFGSGFKCNSAVWKALRS 520 (547)
Q Consensus 475 tsSaSi~~~La~~~~~gr--i~~GDrVlliafGsG~~~~sav~r~~~~ 520 (547)
+.++|++..|..+++..+ ...|+||.+++||||........+....
T Consensus 329 ~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 329 MYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred hhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 999999999999997543 5679999999999998888777776654
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=1.4e-27 Score=237.74 Aligned_cols=235 Identities=19% Similarity=0.166 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.+++++. .||++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 4578899999999999999999999999975 5666899999999999998 79999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCccc---ccceeeeEEEeeecCCCCcccceeec
Q 008975 291 HPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRR---SKYRLVHTVRTHKGADDNCFACVTQE 367 (547)
Q Consensus 291 g~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~---a~~~L~~~v~t~~~sd~~~~~~v~~~ 367 (547)
++.+++||+++|. ++|||||+|+||++.+...++ ...++.+ .....++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~----- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS---TAATFDGASMV----- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEE---EEEcCCCCCCC-----
Confidence 9999999999998 589999999999986532111 1122222 11111211100
Q ss_pred cCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHH
Q 008975 368 EDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAV 447 (547)
Q Consensus 368 ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~v 447 (547)
.... . +. .....++.++.+ ....+|+|+|++|+.+..+
T Consensus 140 --------~~~~-------~------------------~~----~~~~i~~~l~~a-----g~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 140 --------PAVS-------G------------------EG----LARAARKALEGA-----GLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred --------CCCC-------h------------------HH----HHHHHHHHHHHc-----CCCHHHCCEEEccCCcCcc
Confidence 0000 0 00 000112333322 2235799999999999999
Q ss_pred HHHHHHHcCCCccccc--ccccccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEEEecchhhheeEEE
Q 008975 448 LDELEKNLQLSDWHME--PSRMTLYRFGNTSSSSLWYELAYSEAKGRIK-------KGDRTWQIAFGSGFKCNSAVW 515 (547)
Q Consensus 448 l~~v~k~LgL~~e~~e--~S~~tl~r~GNtsSaSi~~~La~~~~~gri~-------~GDrVlliafGsG~~~~sav~ 515 (547)
.+.+++.++++.++.. +...+..+|||++++|.++.|+++.+..+.+ +||++++.++|.|++++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 178 GDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred ccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999887764 4467889999999999999999998876665 899999999999999998874
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=6.9e-25 Score=227.04 Aligned_cols=252 Identities=16% Similarity=0.141 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCccEEEEeccC-CCC---------------------CCChHHHHHHHcCCCCcee
Q 008975 212 AEAVMFGAIDELFAKTSVK----PKDIGILIVNCSL-FNP---------------------TPSLSAMVINHYKLRGNII 265 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~----p~dID~LIv~~s~-~~~---------------------~Psla~~I~~~lGl~~~~~ 265 (547)
..+|+.+|++++|+++|++ +++||.||++++. .+. .|+.+.+|++.+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 3567799999999999999 9999999998653 332 688899999999994 68
Q ss_pred EEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcccCC----------C--Cc--cccccccccccceEEEE
Q 008975 266 SYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFG----------N--DR--SKLVSNCLFRMGGAAIL 331 (547)
Q Consensus 266 ~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~----------~--dr--~~lv~~~lFGDGAAAvL 331 (547)
+++++ +||++++.||++|.++|++++.+++||+++|..+..+... . .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 89999 6999999999999999999999999999999876533210 0 00 11123579999999999
Q ss_pred EeccCCCccc---ccceeeeEEEeeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhH
Q 008975 332 LSNRFSDRRR---SKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQL 408 (547)
Q Consensus 332 Ls~~~~~~~~---a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~ 408 (547)
|++.+....+ ...++.+. ....++..... .. |..+.
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~---~~~~~~~~~~~-~~------------------------------------~~~~~- 206 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGT---AATIDGAGMGA-FA------------------------------------PSAEG- 206 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEE---EEccCCCCCCC-CC------------------------------------cCHHH-
Confidence 9876532111 11222222 11122211000 00 00000
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHHHHHcCCCcccc--cccccccccccccccchHHHHHHH
Q 008975 409 LFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHM--EPSRMTLYRFGNTSSSSLWYELAY 486 (547)
Q Consensus 409 ~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v~k~LgL~~e~~--e~S~~tl~r~GNtsSaSi~~~La~ 486 (547)
. ....++.++. .....+|+|++++|+.|+.+.+.++++++++.++. .+...+..+|||++++|.++.|+.
T Consensus 207 --~-~~~i~~al~~-----agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~ 278 (332)
T cd00825 207 --L-ARAAKEALAV-----AGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDE 278 (332)
T ss_pred --H-HHHHHHHHHH-----cCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHH
Confidence 0 0011233332 12235799999999999999999999888876542 233678999999999999999999
Q ss_pred HHHcCCCC-------------------------CCCEEEEEEecchhhheeEEE
Q 008975 487 SEAKGRIK-------------------------KGDRTWQIAFGSGFKCNSAVW 515 (547)
Q Consensus 487 ~~~~gri~-------------------------~GDrVlliafGsG~~~~sav~ 515 (547)
+.+.++.+ +||+++++++|.|.+++++|+
T Consensus 279 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 279 AVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 98866655 889999999999999998874
No 39
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.78 E-value=1.1e-18 Score=164.59 Aligned_cols=168 Identities=21% Similarity=0.242 Sum_probs=125.4
Q ss_pred CCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHH
Q 008975 134 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAE 213 (547)
Q Consensus 134 ~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~ 213 (547)
||++|.|.+++.|.|+ .+++.+++.+..+. ++. |+....|.++..+.++.| ...+|+
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E----D~vTmA------- 57 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE----DIVTMA------- 57 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS-----HHHHH-------
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc----cHHHHH-------
Confidence 7999999999999999 99999999887653 343 354445555667777665 234555
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCC--CCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKL--RGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl--~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..|++++|++.+++|++|+.|+++| |..+...+.+.+|++.||+ ..+++.+|+. .+|.||+.||+.|.+++++
T Consensus 58 ---~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 58 ---ANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp ---HHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred ---HHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 5566788899999999999 5578999999 5999999999999999999
Q ss_pred CC--CCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccC
Q 008975 291 HP--NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 291 g~--~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
++ ++++|||++|+. + |...+. ...-|-||+|+|++...
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~~-----e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGSA-----EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTTT-----GGG-EEEEEEEEEECS-
T ss_pred CCCCCCeEEEEecccc-c--cCCCCc-----cccccceeEEEEecCCC
Confidence 74 689999999994 3 332221 25679999999998753
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.78 E-value=1.3e-18 Score=162.30 Aligned_cols=120 Identities=24% Similarity=0.415 Sum_probs=91.0
Q ss_pred CccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHH
Q 008975 372 GKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEL 451 (547)
Q Consensus 372 G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v 451 (547)
.++.+.|++++|...++.++..+ +++++..- .. ..++.+|++|+||++|++.+
T Consensus 24 ~Gf~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~g---~~--~~~~~~wavHPGG~~ILd~v 76 (151)
T PF02797_consen 24 TGFHFILSKEVPDLISDNIPPFV----------------------EDLLARHG---LS--DWDILFWAVHPGGRKILDAV 76 (151)
T ss_dssp TEEEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGGT---CC--SGGGSEEEEE-SSHHHHHHH
T ss_pred CeEEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhhc---cc--ccccceeeecCChHHHHHHH
Confidence 34788999999998776443211 12332210 11 23556899999999999999
Q ss_pred HHHcCCCcccccccccccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEEecchhhheeEEEEEe
Q 008975 452 EKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA----KGRIKK---GDRTWQIAFGSGFKCNSAVWKAL 518 (547)
Q Consensus 452 ~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~----~gri~~---GDrVlliafGsG~~~~sav~r~~ 518 (547)
++.|+|+++++.+||++|++|||+||+++++.|+++.+ +|.... +|+++++|||+|++..++++|.+
T Consensus 77 ~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 77 EEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp HHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred HHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 99999999999999999999999999999999999887 354433 48999999999999999999976
No 41
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.78 E-value=4.3e-19 Score=150.89 Aligned_cols=83 Identities=34% Similarity=0.527 Sum_probs=75.1
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhhe
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCN 511 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~ 511 (547)
.+|||+|++||.++++++.+.+.+|++++++ ..++++|||++|+|+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 5799999999999999999999999999998 6799999999999999999999999999999999999999999999
Q ss_pred eEEEEE
Q 008975 512 SAVWKA 517 (547)
Q Consensus 512 sav~r~ 517 (547)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 42
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.69 E-value=1.8e-15 Score=155.43 Aligned_cols=318 Identities=18% Similarity=0.235 Sum_probs=214.3
Q ss_pred CCCCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHH
Q 008975 134 RPRPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAE 213 (547)
Q Consensus 134 ~~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~ 213 (547)
.|.+|.|.++-+|.|. ..|+++++..+-+. +.. | -..|+|+....-.. -||++.
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------K--ytIGLGq~~Mgfcs------------drEDi~ 61 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------K--YTIGLGQTQMGFCS------------DREDII 61 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------c--eEeccCcceecccC------------chhhhh
Confidence 5779999999999999 78999998866542 111 1 23577765433211 123344
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCChHHHHHHHcC--CCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYK--LRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~~Psla~~I~~~lG--l~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+...++++++++-+++++.|+.|-|+|.+ -.-..|.-..+++-++ =..|+..+|..+ +|.||..||-.|-+++.+
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiES 140 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIES 140 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhh
Confidence 555999999999999999999999999853 4556778788888887 455799999995 999999999999999998
Q ss_pred CC--CCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeecc
Q 008975 291 HP--NSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEE 368 (547)
Q Consensus 291 g~--~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~e 368 (547)
.. +++||||++|+.- +-.|+-|. .=|-||.|+|+++...-. |+- +...+|+.. .|+ .|.|
T Consensus 141 ssWDGr~aivV~gDIAv--Y~~G~aRp------TGGAgAVAmLIgPnApi~----fer-glr~thM~h---ayD-FyKP- 202 (462)
T KOG1393|consen 141 SSWDGRYAIVVCGDIAV--YAKGNARP------TGGAGAVAMLIGPNAPII----FER-GLRATHMQH---AYD-FYKP- 202 (462)
T ss_pred cccCCceeEEEEeeEEE--ecCCCCCC------CCCcceEEEEEcCCCceE----ecc-cchhhhhhh---hhh-ccCC-
Confidence 74 7999999999842 22344443 469999999999765421 110 112233322 222 1222
Q ss_pred CCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHH-------HHHHHHhhhccccccccccccEEEec
Q 008975 369 DSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLV-------GKKLFKMKIKPYIPDFKLAFEHFCIH 441 (547)
Q Consensus 369 d~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~-------~r~v~~~a~~~~ip~~~~did~f~~H 441 (547)
.+..+.|-|.|+- .+..|++.. .+|+-+...+. -++-.++||++++|
T Consensus 203 --------dl~SEyPvVDGkl-----------------Si~cYl~Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~ifH 256 (462)
T KOG1393|consen 203 --------DLLSEYPVVDGKL-----------------SIQCYLSALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIFH 256 (462)
T ss_pred --------CCCCcCceecCee-----------------hHHHHHHHHHHHHHHHHHHHHHHhccc-cCcccccCCeEEEe
Confidence 1233455555531 111222211 12222221111 12225689999999
Q ss_pred cCCHHHHHH-H-----------------------------------------HHHcCCCcccccccccccccccccccch
Q 008975 442 AGGRAVLDE-L-----------------------------------------EKNLQLSDWHMEPSRMTLYRFGNTSSSS 479 (547)
Q Consensus 442 ~~gr~vl~~-v-----------------------------------------~k~LgL~~e~~e~S~~tl~r~GNtsSaS 479 (547)
.+--++... + +-...+-.+|+.+|...-.+.||+.++|
T Consensus 257 sP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaS 336 (462)
T KOG1393|consen 257 SPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTAS 336 (462)
T ss_pred CchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHH
Confidence 987655544 1 1112233457777777777999999999
Q ss_pred HHHHHHHHHHcC--CCCCCCEEEEEEecchhhheeEEEEEecccC
Q 008975 480 LWYELAYSEAKG--RIKKGDRTWQIAFGSGFKCNSAVWKALRSIN 522 (547)
Q Consensus 480 i~~~La~~~~~g--ri~~GDrVlliafGsG~~~~sav~r~~~~~~ 522 (547)
+...|+.++... .--.|.||.+.++|||......-+|...+..
T Consensus 337 ly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 337 LYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 999999988865 3357999999999999998888888877544
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.64 E-value=4.5e-15 Score=156.43 Aligned_cols=256 Identities=13% Similarity=0.047 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHHHhCC-CCCCCccEEEEecc------CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTS-VKPKDIGILIVNCS------LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDL 283 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kag-i~p~dID~LIv~~s------~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~l 283 (547)
...+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....++++++ ||++++.||..
T Consensus 64 r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~~ 142 (348)
T PRK06147 64 RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALAQ 142 (348)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHHH
Confidence 455788999999999999 79999999998643 22234456788999999965577899994 99999999999
Q ss_pred HHHHHhcCCCCeEEEEEEccccCc----ccC------CCCccccccccccccceEEEEEeccCCCcccccceeeeEEEee
Q 008975 284 ANNLLQVHPNSYALVISMENITLN----WYF------GNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTH 353 (547)
Q Consensus 284 A~~lL~sg~~~~aLVVstE~~S~~----~~~------~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~ 353 (547)
|.++|+.+..+.+||+++|..+.. ++. .+++.. ..+|||||+++||++.+...++ .-++.. . .
T Consensus 143 A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~---G~v~GEGA~a~vLe~~~~A~~r-ga~i~a-~--g 215 (348)
T PRK06147 143 ARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN---GFIPGEAAAAVLLGRPAGGEAP-GLPLLG-L--G 215 (348)
T ss_pred HHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCC---ceeeeceEEEEEEccHhhhhcC-CCceEE-E--E
Confidence 999999999999999999986641 110 122221 4689999999999976542211 112222 1 1
Q ss_pred ecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccc
Q 008975 354 KGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKL 433 (547)
Q Consensus 354 ~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~ 433 (547)
.+.+...+. .. . +.|. .++ .+ .+.++.+++. .....+
T Consensus 216 ~~~~~~~~~---~~----------~--~~p~-~g~------------------gl--------~~ai~~AL~~-agl~~~ 252 (348)
T PRK06147 216 LGREPAPVG---ES----------E--DLPL-RGD------------------GL--------TQAIRAALAE-AGCGLE 252 (348)
T ss_pred EeecCCCcc---cC----------C--CCCC-ChH------------------HH--------HHHHHHHHHH-cCCCHH
Confidence 111211110 00 0 0000 000 00 0122222222 122357
Q ss_pred cccEEEeccCCHHHHHHH-----HHHcCCCcccccccccccccccccccchHHHHHHHHHH--cCCCCCCCEEEEEEecc
Q 008975 434 AFEHFCIHAGGRAVLDEL-----EKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEA--KGRIKKGDRTWQIAFGS 506 (547)
Q Consensus 434 did~f~~H~~gr~vl~~v-----~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~--~gri~~GDrVlliafGs 506 (547)
|||+++.|..|....+.. .+.++-..+... -..+-..+||+++++-.+++..... +...-+|+++++++-.-
T Consensus 253 dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 253 DMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCC
Confidence 999999999877665443 334543222221 1345677999999999999886443 24456799999999987
Q ss_pred hhhheeEEEEEe
Q 008975 507 GFKCNSAVWKAL 518 (547)
Q Consensus 507 G~~~~sav~r~~ 518 (547)
.-..++++++..
T Consensus 332 ~g~r~a~~l~~~ 343 (348)
T PRK06147 332 DGARAALVLEYR 343 (348)
T ss_pred CCceEEEEEecc
Confidence 777899998854
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.60 E-value=8.3e-15 Score=150.57 Aligned_cols=115 Identities=16% Similarity=0.165 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 292 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~ 292 (547)
.+|+.+|+++||+++|++++|||.+|+++.+. .+..+..+++++|+ +.|++++ +|+++..||.+|..++++|.
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG~ 123 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGGF 123 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCCC
Confidence 46779999999999999999999999987543 34568899999997 3599995 99999999999999999999
Q ss_pred CCeEEEEEEccccC---c--cc-CC--CCccccccccccccceEEEEEeccCC
Q 008975 293 NSYALVISMENITL---N--WY-FG--NDRSKLVSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 293 ~~~aLVVstE~~S~---~--~~-~~--~dr~~lv~~~lFGDGAAAvLLs~~~~ 337 (547)
.++||||++|..|. . +. .+ ++|.+ ..+|+|||+|+||++.+.
T Consensus 124 ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 124 ADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 99999999998872 1 11 22 45554 579999999999998754
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.53 E-value=3e-13 Score=139.45 Aligned_cols=115 Identities=23% Similarity=0.262 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 293 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~ 293 (547)
+|+.+|+++||+++|++++|||.+|+++.... +..+..+++.+|+ +.|++.+ +|+++..||.+|..++++|..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG~a 130 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGGFA 130 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcCCC
Confidence 56799999999999999999999999975433 4678899999986 5899996 999999999999999999999
Q ss_pred CeEEEEEEccccC---cccC----CCCccccccccccccceEEEEEeccCC
Q 008975 294 SYALVISMENITL---NWYF----GNDRSKLVSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 294 ~~aLVVstE~~S~---~~~~----~~dr~~lv~~~lFGDGAAAvLLs~~~~ 337 (547)
++||||++|..+. .|.. |..|.. +...+++||+|+||++...
T Consensus 131 d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 131 DRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 9999999999875 2322 223321 2578999999999997654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.49 E-value=2.1e-12 Score=137.91 Aligned_cols=184 Identities=16% Similarity=0.189 Sum_probs=117.4
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcC-CCChHhHHHHHHHHHHhCCceEE--ecCCcccCCCCCcchHHHH--H
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTG-TFTEENLQFQKKILERSGLGDST--YLPEAVLNIPPNPSMKEAR--K 210 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~-~~~~~~~~f~~rI~~~sGI~er~--~~~~~~~~~~~~~~ma~~r--~ 210 (547)
++|+|+++|+..|. -.+.+++.+.+..-. .+.+-. +| +..+...+. ..+..... ......+.+ .
T Consensus 1 ~~i~I~G~g~~~p~---g~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~ 69 (406)
T cd00834 1 RRVVITGLGAVTPL---GNGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPE--DYLDRKELRRMD 69 (406)
T ss_pred CcEEEECcceeCCC---cCCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChh--hcCCHHHhccCC
Confidence 47999999999998 367788887653210 011000 00 011111111 11111100 000111111 2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccE----EEEecc-CC--------------------------CCCCChHHHHHHHcC
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGI----LIVNCS-LF--------------------------NPTPSLSAMVINHYK 259 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~----LIv~~s-~~--------------------------~~~Psla~~I~~~lG 259 (547)
...+|+..|++++|+++|++++++|. ++++++ .. ...+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46789999999999999999776553 444432 11 122457889999999
Q ss_pred CCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc----------------------ccCC-CCccc
Q 008975 260 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----------------------WYFG-NDRSK 316 (547)
Q Consensus 260 l~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~----------------------~~~~-~dr~~ 316 (547)
++ ..++.+. .||++++.||..|.++|++|..+++||+++|..+.. ..+. .+++
T Consensus 150 l~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~- 225 (406)
T cd00834 150 LR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRD- 225 (406)
T ss_pred CC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCC-
Confidence 96 4788999 599999999999999999999999999999987610 0011 1222
Q ss_pred cccccccccceEEEEEeccCC
Q 008975 317 LVSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 317 lv~~~lFGDGAAAvLLs~~~~ 337 (547)
..++||||+|+||++.+.
T Consensus 226 ---g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 226 ---GFVLGEGAGVLVLESLEH 243 (406)
T ss_pred ---CEeeeccEEEEEEecHHH
Confidence 368999999999987553
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.45 E-value=3.5e-12 Score=136.31 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|+++||+++|++++|||.+|++++ ++...|..+..+++.+|+++++++++++ ++|++++.++.+|..++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 3467799999999999999999999998864 4555778888899999998558899999 5999999999999999999
Q ss_pred CCCCeEEEEEEcccc
Q 008975 291 HPNSYALVISMENIT 305 (547)
Q Consensus 291 g~~~~aLVVstE~~S 305 (547)
|..+++||+++|.+|
T Consensus 101 G~~~~vLv~g~e~~s 115 (386)
T cd00751 101 GEADVVVAGGVESMS 115 (386)
T ss_pred CCCCeEEEeeeeccc
Confidence 999999999999865
No 48
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.40 E-value=3.5e-11 Score=129.53 Aligned_cols=120 Identities=16% Similarity=0.192 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-CCCC-------------------CCChHHHHHHHcCCCCceeEE
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIG----ILIVNCS-LFNP-------------------TPSLSAMVINHYKLRGNIISY 267 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID----~LIv~~s-~~~~-------------------~Psla~~I~~~lGl~~~~~~f 267 (547)
...|+..|+++||+++|+++++|| .++++++ .++. .+..+..|+..+|++. .++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g--~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG--PSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC--Ccc
Confidence 457899999999999999999998 7777753 2221 3456788999999973 789
Q ss_pred EecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc----------cc------CCCCccccccccccccceEEEE
Q 008975 268 NLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----------WY------FGNDRSKLVSNCLFRMGGAAIL 331 (547)
Q Consensus 268 dL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~----------~~------~~~dr~~lv~~~lFGDGAAAvL 331 (547)
.++ .+|++++.||..|.++|++|..+++||+++|..... +. .+-|.. -...++||||+|+|
T Consensus 165 ~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalV 241 (424)
T smart00825 165 TVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVVV 241 (424)
T ss_pred ccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEEE
Confidence 999 499999999999999999999999999999974320 11 011111 02468899999999
Q ss_pred EeccC
Q 008975 332 LSNRF 336 (547)
Q Consensus 332 Ls~~~ 336 (547)
|+...
T Consensus 242 Le~~e 246 (424)
T smart00825 242 LKRLS 246 (424)
T ss_pred EccHH
Confidence 99754
No 49
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.37 E-value=1.2e-12 Score=109.27 Aligned_cols=79 Identities=23% Similarity=0.396 Sum_probs=60.4
Q ss_pred EEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCCCccccccee
Q 008975 267 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRL 346 (547)
Q Consensus 267 fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L 346 (547)
|||+ ++|++++.||++|.++++++..++||||++|..+. +.++.++.. ..+|||||+|+||++.++. .+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCCC----CCeE
Confidence 7999 59999999999999999999999999999999988 555555543 3689999999999997432 3555
Q ss_pred eeEEEeeecCC
Q 008975 347 VHTVRTHKGAD 357 (547)
Q Consensus 347 ~~~v~t~~~sd 357 (547)
++ +++.+|
T Consensus 72 l~---~~~~td 79 (80)
T PF08545_consen 72 LD---SHLRTD 79 (80)
T ss_dssp EE---EEEEE-
T ss_pred EE---EEEEcC
Confidence 44 344444
No 50
>PRK09051 beta-ketothiolase; Provisional
Probab=99.36 E-value=5.9e-11 Score=127.31 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCC-ChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTP-SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~P-sla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|++++|+++|++|+|||.+|++|+ ++...+ ..+..+....|+++++++++++ .+|++|+.|+.+|.+++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~s 106 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAILL 106 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHHc
Confidence 466799999999999999999999999865 444433 4555666778997679999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+++||+++|.+|.
T Consensus 107 G~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 107 GDADVAIGGGAESMSR 122 (394)
T ss_pred CCCCEEEEEeehhccc
Confidence 9999999999998774
No 51
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=6.4e-11 Score=127.02 Aligned_cols=93 Identities=16% Similarity=0.222 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++|+|||.+|++|. +....|..+..++.++|++..+++++++ .+|++|+.++..|.+++++|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~sG 105 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRCG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHcC
Confidence 466799999999999999999999999875 3334567788899999998558999999 59999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+++||+++|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 106 DAEVIIAGGQENMSL 120 (393)
T ss_pred CCCEEEEEEEhhhcc
Confidence 999999999997764
No 52
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.35 E-value=3.3e-11 Score=128.85 Aligned_cols=94 Identities=18% Similarity=0.266 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|+++||+++|++++|||.+|+++. ++...|..+..++.++|++.++++++++ .+|++++.++.+|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 3577799999999999999999999998764 4444577788899999998668999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+++||+++|.+|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998653
No 53
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=1e-10 Score=125.14 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCC--CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~--~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|++++.++..|.++++
T Consensus 23 ~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I~ 100 (389)
T PRK06064 23 RDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAVA 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHHH
Confidence 466799999999999999999999998754 3332 467788999999997 68899999 599999999999999999
Q ss_pred cCCCCeEEEEEEcccc
Q 008975 290 VHPNSYALVISMENIT 305 (547)
Q Consensus 290 sg~~~~aLVVstE~~S 305 (547)
+|..+++||+++|..|
T Consensus 101 sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 101 SGEADVVLAAGVEKMT 116 (389)
T ss_pred CCCCCEEEEEEEEecc
Confidence 9999999999999755
No 54
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.31 E-value=1.7e-10 Score=122.33 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|++++|+++|++|+|||.++++++ +....|..+.++++++|++ ++.+++++ .+|++++.++..|..++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 4577799999999999999999999998765 4443577889999999997 78999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+||+++|..+.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 55
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=4e-10 Score=120.62 Aligned_cols=91 Identities=15% Similarity=0.068 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~--~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|+++||+++|++++|||.+|++++++.. .+..+..+++++|++ +.+++++++ +|+++..++..|..+|++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I~s 102 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLVQS 102 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHHHC
Confidence 3677999999999999999999999988654332 122347899999997 688999995 999999999999999999
Q ss_pred CCCCeEEEEEEcccc
Q 008975 291 HPNSYALVISMENIT 305 (547)
Q Consensus 291 g~~~~aLVVstE~~S 305 (547)
|..++||||++|..+
T Consensus 103 G~~~~vLVvg~e~~s 117 (386)
T PRK08313 103 GVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCEEEEEEEEEcc
Confidence 999999999999764
No 56
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.30 E-value=1.7e-10 Score=123.87 Aligned_cols=93 Identities=16% Similarity=0.225 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCccEEEEecc-CCCCCCChHHHHH-HHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 213 EAVMFGAIDELFAKT-SVKPKDIGILIVNCS-LFNPTPSLSAMVI-NHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 213 ~~l~~~Aa~~aL~ka-gi~p~dID~LIv~~s-~~~~~Psla~~I~-~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.+|+.+|++++|+++ |++|+|||.+|++++ ++...|...++++ ..+|++..+++++++ .+|++|+.|+..|.++++
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 110 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRIR 110 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 467799999999997 999999999999864 4555555566654 555997458999999 599999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+||+++|.+|.
T Consensus 111 sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 111 VGEADVMIAAGVESMSM 127 (399)
T ss_pred CCCCCEEEEEEEecccc
Confidence 99999999999998763
No 57
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.28 E-value=4.4e-10 Score=120.14 Aligned_cols=91 Identities=15% Similarity=0.237 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++|+|||.+|++++. ....+..+..+++.+|++ +..+++++ ++|++++.+|..|..++++|
T Consensus 22 ~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~sG 99 (385)
T PRK12578 22 QELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVASG 99 (385)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHCC
Confidence 3667999999999999999999999988643 222233478899999998 46789999 69999999999999999999
Q ss_pred CCCeEEEEEEcccc
Q 008975 292 PNSYALVISMENIT 305 (547)
Q Consensus 292 ~~~~aLVVstE~~S 305 (547)
..+++|||++|.+|
T Consensus 100 ~~~~vLvvg~e~~s 113 (385)
T PRK12578 100 LVDMAIAVGVDKMT 113 (385)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999865
No 58
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.27 E-value=4e-10 Score=120.79 Aligned_cols=123 Identities=13% Similarity=0.070 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC------ccEEEEeccC----------------------CCCC--CChHHHHHHHcCC
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKD------IGILIVNCSL----------------------FNPT--PSLSAMVINHYKL 260 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~d------ID~LIv~~s~----------------------~~~~--Psla~~I~~~lGl 260 (547)
....++..|+++||+++|+++++ +++++.++.. .... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 45688999999999999998755 3433333211 0111 4567889999999
Q ss_pred CCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccC-c-------------------ccCCCCccccccc
Q 008975 261 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL-N-------------------WYFGNDRSKLVSN 320 (547)
Q Consensus 261 ~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~-~-------------------~~~~~dr~~lv~~ 320 (547)
+ ...++.+.+ +|++++.||..|.++|++|..+.+||.++|..+. . ...+.|+. -..
T Consensus 151 ~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 247899994 9999999999999999999999999999998651 0 00011111 024
Q ss_pred cccccceEEEEEeccCC
Q 008975 321 CLFRMGGAAILLSNRFS 337 (547)
Q Consensus 321 ~lFGDGAAAvLLs~~~~ 337 (547)
+++||||+|+||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 68999999999997653
No 59
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.25 E-value=1.8e-09 Score=117.03 Aligned_cols=179 Identities=18% Similarity=0.189 Sum_probs=110.7
Q ss_pred CeEEEEEeEEcCCCCceecHHHHHHHhhhcCC--CChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHH
Q 008975 137 PVYLVDFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEA 214 (547)
Q Consensus 137 ~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~ 214 (547)
+|.|.|+|+-.|- -.+.+++.+.+.. |. +.+-. +| ...++..+-...-+.. ++.. +. .......
T Consensus 12 ~VvITG~G~vs~~---G~~~~~~~~~L~~-G~s~i~~~~-~~-----~~~~~~~~~~g~~~~~--~~~~-~~-~~~~~~~ 77 (425)
T PRK06501 12 IVAVTGMGVVTSL---GQGKADNWAALTA-GESGIHTIT-RF-----PTEGLRTRIAGTVDFL--PESP-FG-ASALSEA 77 (425)
T ss_pred CEEEEeeeEECCC---CCCHHHHHHHHHc-CCCceEcCC-cc-----cccCCCCceEEEEeec--cccc-cc-ccCHHHH
Confidence 5999999999987 4677888876643 11 00000 00 0111111100000000 0000 00 0112356
Q ss_pred HHHHHHHHHHHhCCCCCCCcc------------------EEEEecc----------------CCC-------CCCChHHH
Q 008975 215 VMFGAIDELFAKTSVKPKDIG------------------ILIVNCS----------------LFN-------PTPSLSAM 253 (547)
Q Consensus 215 l~~~Aa~~aL~kagi~p~dID------------------~LIv~~s----------------~~~-------~~Psla~~ 253 (547)
++..|++++|+.+|+++.+.+ .++..+. +.. ..|+.+..
T Consensus 78 ~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (425)
T PRK06501 78 LARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADR 157 (425)
T ss_pred HHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHH
Confidence 789999999999999654321 1112111 111 34578899
Q ss_pred HHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEcc---------------ccCc--c-----cC-
Q 008975 254 VINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN---------------ITLN--W-----YF- 310 (547)
Q Consensus 254 I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~---------------~S~~--~-----~~- 310 (547)
|+.++|++ ..+++++. +|++++.||..|.++|++|..+++||+++|. ++.. + .+
T Consensus 158 i~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf 234 (425)
T PRK06501 158 LADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPF 234 (425)
T ss_pred HHHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCC
Confidence 99999997 57899994 9999999999999999999999999999993 2210 0 00
Q ss_pred CCCccccccccccccceEEEEEeccC
Q 008975 311 GNDRSKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 311 ~~dr~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
..+|+ ..++||||+|+||+..+
T Consensus 235 d~~r~----G~v~GEGaaalVLe~~~ 256 (425)
T PRK06501 235 SKDRD----GFVMAEGAGALVLESLE 256 (425)
T ss_pred CCCCC----CeeeeccEEEEEECcHH
Confidence 02333 36899999999998754
No 60
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.24 E-value=8.1e-10 Score=118.23 Aligned_cols=120 Identities=12% Similarity=0.094 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccE----EEEeccCC------------------C--------CCC-ChHHHHHHHcCC
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGI----LIVNCSLF------------------N--------PTP-SLSAMVINHYKL 260 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~----LIv~~s~~------------------~--------~~P-sla~~I~~~lGl 260 (547)
..+++..|++++|+++|++++++|. ++++++.. . ..+ ..+..|...+|+
T Consensus 71 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T TIGR03150 71 FIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA 150 (407)
T ss_pred HHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC
Confidence 4688999999999999999988876 55554211 0 011 145678899999
Q ss_pred CCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc-----------c--cC--------CCCcccccc
Q 008975 261 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----------W--YF--------GNDRSKLVS 319 (547)
Q Consensus 261 ~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~-----------~--~~--------~~dr~~lv~ 319 (547)
+ ..++.+.. +|++++.||..|.++|++|..+.+||++.|..... + +. +-|+.. .
T Consensus 151 ~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~--~ 225 (407)
T TIGR03150 151 K--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR--D 225 (407)
T ss_pred C--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC--C
Confidence 6 57888884 99999999999999999999999999999963210 0 00 001110 1
Q ss_pred ccccccceEEEEEeccC
Q 008975 320 NCLFRMGGAAILLSNRF 336 (547)
Q Consensus 320 ~~lFGDGAAAvLLs~~~ 336 (547)
..+.||||+|+||++.+
T Consensus 226 g~~~gEGAaalvL~~~~ 242 (407)
T TIGR03150 226 GFVMGEGAGVLVLEELE 242 (407)
T ss_pred cEEEeceEEEEEEeeHH
Confidence 35789999999998755
No 61
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.23 E-value=1.4e-09 Score=116.60 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccE----EEEecc-CCC-------------------CCCChHHHHHHHcCCCCceeE
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGI----LIVNCS-LFN-------------------PTPSLSAMVINHYKLRGNIIS 266 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~----LIv~~s-~~~-------------------~~Psla~~I~~~lGl~~~~~~ 266 (547)
...+|+..|++++|+++|++++++|. ++++++ .++ ..+..+..+...+|++ ..+
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 35789999999999999999887764 555543 111 1144677899999997 388
Q ss_pred EEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc-----------------ccCC-CCccccccccccccceE
Q 008975 267 YNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----------------WYFG-NDRSKLVSNCLFRMGGA 328 (547)
Q Consensus 267 fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~-----------------~~~~-~dr~~lv~~~lFGDGAA 328 (547)
+.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ..+. .+++ ..++||||+
T Consensus 164 ~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~----g~~~geGAa 238 (421)
T cd00833 164 LTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADAD----GYVRGEGVG 238 (421)
T ss_pred eeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCC----CeeeeceEE
Confidence 99994 99999999999999999999999999999975310 0011 1122 468999999
Q ss_pred EEEEeccCC
Q 008975 329 AILLSNRFS 337 (547)
Q Consensus 329 AvLLs~~~~ 337 (547)
|+||++.+.
T Consensus 239 alvL~~~~~ 247 (421)
T cd00833 239 VVVLKRLSD 247 (421)
T ss_pred EEEEeeHHH
Confidence 999987543
No 62
>PRK05790 putative acyltransferase; Provisional
Probab=99.20 E-value=1.5e-09 Score=116.42 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|+++||+++|++|+|||.+|+++. +....+..+..++..+|++.++.+++++ .+|++++.++..|..++++|
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~sG 105 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHcC
Confidence 466799999999999999999999998864 2222344556677888997568899999 59999999999999999999
Q ss_pred CCCeEEEEEEcccc
Q 008975 292 PNSYALVISMENIT 305 (547)
Q Consensus 292 ~~~~aLVVstE~~S 305 (547)
..+++||++.|.+|
T Consensus 106 ~~d~vLv~G~e~~s 119 (393)
T PRK05790 106 DADIVVAGGQESMS 119 (393)
T ss_pred CCCEEEEEeeeccc
Confidence 99999999999754
No 63
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=2.1e-09 Score=115.71 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~--~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+++|+..+++++++++|++|++||.||++|..... .+.++.++.-+-||+.+++++.++ +-|++|+.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 55777999999999999999999999999864322 477899999999999899999999 799999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+-+|+.+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999995
No 64
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=1.8e-09 Score=115.98 Aligned_cols=90 Identities=18% Similarity=0.301 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCC---ChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTP---SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~P---sla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
.+|+.+|++++|+++|++|+|||.+|+++. ++...| +....+...++ .++++++++ ++|++|+.++..|.+++
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~I 109 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAMEI 109 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHHH
Confidence 466799999999999999999999999865 333223 33444555555 468999999 69999999999999999
Q ss_pred hcCCCCeEEEEEEcccc
Q 008975 289 QVHPNSYALVISMENIT 305 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S 305 (547)
++|..+++||+++|.+|
T Consensus 110 ~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 110 ATGMADIVIAGGVEHMT 126 (394)
T ss_pred HcCCCCEEEEeeecccc
Confidence 99999999999999766
No 65
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.16 E-value=5.7e-09 Score=112.22 Aligned_cols=183 Identities=13% Similarity=0.103 Sum_probs=114.5
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcC-CCChHhHHHHHHHHHHhCCceEE--ecCCcc--cCCCCCcchHHHH-
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTG-TFTEENLQFQKKILERSGLGDST--YLPEAV--LNIPPNPSMKEAR- 209 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~-~~~~~~~~f~~rI~~~sGI~er~--~~~~~~--~~~~~~~~ma~~r- 209 (547)
++|.|+|+||..|. -.+.+++.+.+..-. .+.+-. +| ...+...+. .++... ...++ .+.+
T Consensus 2 ~~v~ItG~g~~~p~---g~~~~~~w~~l~~g~~~~~~~~-~~-----~~~~~~~~~~g~i~~f~~~~~~~~----~~~~~ 68 (411)
T PRK07314 2 RRVVVTGLGAVSPL---GNDVESTWKNLLAGKSGIGPIT-HF-----DTSDLAVKIAGEVKDFNPDDYMSR----KEARR 68 (411)
T ss_pred CcEEEEcceEECCC---cCCHHHHHHHHHhCCCcEEECC-cc-----cccCCCccEEEEeCCcChhhcCCH----HHhhc
Confidence 57999999999998 367888887664310 000000 00 011111110 111000 00111 1111
Q ss_pred -HHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC------------------C--------CCCC-hHHHHHHH
Q 008975 210 -KEAEAVMFGAIDELFAKTSVKPKDIG----ILIVNCSLF------------------N--------PTPS-LSAMVINH 257 (547)
Q Consensus 210 -~ea~~l~~~Aa~~aL~kagi~p~dID----~LIv~~s~~------------------~--------~~Ps-la~~I~~~ 257 (547)
.....++..|++++|+++|++++++| .++++++.. . ..++ .+..|...
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (411)
T PRK07314 69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR 148 (411)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence 23467899999999999999998887 466654311 0 1122 45679999
Q ss_pred cCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcc---------------------cCCCCccc
Q 008975 258 YKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW---------------------YFGNDRSK 316 (547)
Q Consensus 258 lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~---------------------~~~~dr~~ 316 (547)
+|+++ .++-+. .+|++++.||..|.++|++|..+.+||.+.|..+..+ ...-|++.
T Consensus 149 ~gl~G--p~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~ 225 (411)
T PRK07314 149 YGAKG--PNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR 225 (411)
T ss_pred hCCCC--ccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC
Confidence 99974 678888 4999999999999999999999999999999643210 00001110
Q ss_pred cccccccccceEEEEEeccC
Q 008975 317 LVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 317 lv~~~lFGDGAAAvLLs~~~ 336 (547)
..+++||||+|+||++.+
T Consensus 226 --dG~~~geGAaavvL~~~~ 243 (411)
T PRK07314 226 --DGFVMGEGAGILVLEELE 243 (411)
T ss_pred --CCEeEEceEEEEEEeeHH
Confidence 136889999999998754
No 66
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.13 E-value=2.3e-09 Score=110.41 Aligned_cols=115 Identities=17% Similarity=0.257 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 292 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~ 292 (547)
.+|+.+|+++||+++|++++|||.+++++......|+ ..++++||++ .+++.+ +||++..||.+|..++++|.
T Consensus 55 ~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG~ 127 (334)
T PRK12404 55 RKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSGG 127 (334)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcCC
Confidence 3678999999999999999999999999876656665 4999999954 599996 99999999999999999999
Q ss_pred CCeEEEEEEccccC---cccC----CCCccccccccccccceEEEEEeccC
Q 008975 293 NSYALVISMENITL---NWYF----GNDRSKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 293 ~~~aLVVstE~~S~---~~~~----~~dr~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
.++||++++-..+. .|.. |..|.. +...---||+|+||++..
T Consensus 128 Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 128 AKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 99999998765442 2222 222321 122234588999998764
No 67
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=4.1e-09 Score=113.03 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|++++|+++|+.++|||.+|++++ ++.. .+..+.+++..+|++..+++++++ .+|++|+.|+..|...+++
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~s 106 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIML 106 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 467799999999999988899999999864 3333 367777899999998569999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+||++.|.+|.
T Consensus 107 G~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 107 GHSEAVIAGGAESMSL 122 (391)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998763
No 68
>PRK06158 thiolase; Provisional
Probab=99.09 E-value=8.2e-09 Score=110.47 Aligned_cols=86 Identities=15% Similarity=0.049 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 292 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~ 292 (547)
.+|+.+|+++||+++|++++|||.+++++. +...|+ ..+++++|++ ..+.+++. .||+++..++..|..++++|.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG~ 103 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAGL 103 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcCC
Confidence 366799999999999999999999998763 233443 5799999997 57888998 599999999999999999999
Q ss_pred CCeEEEE-EEcc
Q 008975 293 NSYALVI-SMEN 303 (547)
Q Consensus 293 ~~~aLVV-stE~ 303 (547)
.++|||+ +.|.
T Consensus 104 ~d~vLV~~g~~~ 115 (384)
T PRK06158 104 CDVALICYGSNQ 115 (384)
T ss_pred CCEEEEeecccc
Confidence 9999998 4443
No 69
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.09 E-value=1.4e-08 Score=109.55 Aligned_cols=119 Identities=17% Similarity=0.315 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCccEEEEecc----------------CCCCCC---------ChHHHHHHHcCCCCc
Q 008975 212 AEAVMFGAIDELFAKTSVK---PKDIGILIVNCS----------------LFNPTP---------SLSAMVINHYKLRGN 263 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~---p~dID~LIv~~s----------------~~~~~P---------sla~~I~~~lGl~~~ 263 (547)
...++..|++++|+++|++ ++++++++-++. +.+..| ..+..|+..||+++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 5578999999999999986 567777775432 111112 25667889999974
Q ss_pred eeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEcc-ccCc----c------------------cCC--CCccccc
Q 008975 264 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN-ITLN----W------------------YFG--NDRSKLV 318 (547)
Q Consensus 264 ~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~-~S~~----~------------------~~~--~dr~~lv 318 (547)
.++.+++ +|++++.||..|.++|++|..+.+||+++|. .+.. + ..+ .+++
T Consensus 159 -~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~d--- 233 (410)
T PRK07103 159 -EGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRD--- 233 (410)
T ss_pred -Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCC---
Confidence 6788995 9999999999999999999999999999864 2110 0 000 1122
Q ss_pred cccccccceEEEEEeccCC
Q 008975 319 SNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 319 ~~~lFGDGAAAvLLs~~~~ 337 (547)
..++||||+|+||++.+.
T Consensus 234 -G~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 234 -GFIYGEACGAVVLESAES 251 (410)
T ss_pred -CeeEeeeEEEEEEccHHH
Confidence 368899999999987543
No 70
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.08 E-value=1.6e-08 Score=109.39 Aligned_cols=119 Identities=15% Similarity=0.111 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCc-c----EEEEeccC-C---------------------C----CCC-ChHHHHHHHc
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDI-G----ILIVNCSL-F---------------------N----PTP-SLSAMVINHY 258 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dI-D----~LIv~~s~-~---------------------~----~~P-sla~~I~~~l 258 (547)
....++..|++++|+++|++++++ + .++++++. . . ..+ ..+..|...|
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 356788999999999999987765 2 34444431 1 0 011 2366789999
Q ss_pred CCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcc----------cC------------C--CCc
Q 008975 259 KLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW----------YF------------G--NDR 314 (547)
Q Consensus 259 Gl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~----------~~------------~--~dr 314 (547)
|++ -+++.+. .+|++++.||..|.++|++|..+.+||+++|.....+ +. + .++
T Consensus 161 gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 4777888 5999999999999999999999999999999732100 00 0 112
Q ss_pred cccccccccccceEEEEEeccC
Q 008975 315 SKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 315 ~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
+ ..+.||||+++||++.+
T Consensus 238 ~----G~~~gEGaa~lvLe~~~ 255 (424)
T PRK06333 238 D----GFVMGEGAGILVIETLE 255 (424)
T ss_pred C----CeEEecceEEEEEeeHH
Confidence 2 35689999999998754
No 71
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=1.5e-08 Score=107.65 Aligned_cols=90 Identities=14% Similarity=0.138 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
+++|+..|++++++ |++ +|||.+|+++.... .+..+..+....|++..++++.++ .+|++|+.++..|.+++++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 45777999999866 886 89999999865321 244555688999998679999999 59999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+.+|+++.|.+|.
T Consensus 100 ~~d~~l~gG~E~ms~ 114 (361)
T PRK06690 100 AGKCYIAGGVESTST 114 (361)
T ss_pred CCCEEEEeccccccC
Confidence 999999999999874
No 72
>PRK08256 lipid-transfer protein; Provisional
Probab=99.05 E-value=1.9e-08 Score=107.90 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|+++||+++|++++|||.+++++.. .... ...+...+|++ ++++++++ .+|++++.+|..|.++|++|
T Consensus 23 ~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 4677999999999999999999999887542 2211 23567889997 57889999 59999999999999999999
Q ss_pred CCCeEEEEEEcccc
Q 008975 292 PNSYALVISMENIT 305 (547)
Q Consensus 292 ~~~~aLVVstE~~S 305 (547)
..+++||+++|..|
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999765
No 73
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.05 E-value=4.7e-08 Score=105.71 Aligned_cols=119 Identities=14% Similarity=0.121 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCC-----CccEEEEeccCC-----------------C--------CCC-ChHHHHHHHcCC
Q 008975 212 AEAVMFGAIDELFAKTSVKPK-----DIGILIVNCSLF-----------------N--------PTP-SLSAMVINHYKL 260 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~-----dID~LIv~~s~~-----------------~--------~~P-sla~~I~~~lGl 260 (547)
...++..|+.++|+++|++++ ++++++-++... . ..| ..+..|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 457889999999999999754 344444332110 0 112 367889999999
Q ss_pred CCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcc----------cC-----------C--CCcccc
Q 008975 261 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW----------YF-----------G--NDRSKL 317 (547)
Q Consensus 261 ~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~----------~~-----------~--~dr~~l 317 (547)
++ +++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ .. + .+|+
T Consensus 154 ~G--p~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~-- 228 (414)
T PRK08722 154 RG--PNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRD-- 228 (414)
T ss_pred CC--Cccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCC--
Confidence 85 788889 5999999999999999999999999999999743210 00 0 1122
Q ss_pred ccccccccceEEEEEeccCC
Q 008975 318 VSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 318 v~~~lFGDGAAAvLLs~~~~ 337 (547)
..+.|||++++||+....
T Consensus 229 --G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 229 --GFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred --ceEeeceEEEEEEccHHH
Confidence 367899999999986543
No 74
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.04 E-value=3e-08 Score=106.88 Aligned_cols=119 Identities=16% Similarity=0.155 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccE----EEEeccCC--------------------------CCCC-ChHHHHHHHcC
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGI----LIVNCSLF--------------------------NPTP-SLSAMVINHYK 259 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~----LIv~~s~~--------------------------~~~P-sla~~I~~~lG 259 (547)
....++..|++++|+++|+++++++. ++++++.. ...| ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 35789999999999999999877652 44433210 0112 46778999999
Q ss_pred CCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccc-cCc---------cc-----------CC--CCccc
Q 008975 260 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TLN---------WY-----------FG--NDRSK 316 (547)
Q Consensus 260 l~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~-S~~---------~~-----------~~--~dr~~ 316 (547)
+++ .++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. .. .+ .+|+
T Consensus 151 l~G--p~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~- 226 (406)
T PRK08439 151 LKG--PNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRD- 226 (406)
T ss_pred CCC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCC-
Confidence 984 678888 599999999999999999999999999999963 210 00 00 1223
Q ss_pred cccccccccceEEEEEeccC
Q 008975 317 LVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 317 lv~~~lFGDGAAAvLLs~~~ 336 (547)
..++|+||+++||+...
T Consensus 227 ---G~v~gEGa~~lvLe~~~ 243 (406)
T PRK08439 227 ---GFVMGEGAGALVLEEYE 243 (406)
T ss_pred ---cEEeeCceEEEEEccHH
Confidence 36789999999998654
No 75
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=1.1e-09 Score=117.50 Aligned_cols=94 Identities=15% Similarity=0.213 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCC-hHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPS-LSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Ps-la~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+.+|+.+|++++|+++|++|+|||.+|+++. ++...|+ .+..+..++|++.++++++++ ++|++|+.|+.+|..+++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 3467799999999999999999999999864 4555554 888999999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999985
No 76
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.01 E-value=3.8e-08 Score=105.72 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~-~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++++|||.+|+++... ...+..+..+...+|++.+++++.++ .+|+++..++..|.+.+++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~sG 104 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQLG 104 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHcC
Confidence 46779999999999999999999999876421 11334556788999997668899999 59999999999999999999
Q ss_pred CCCeEEEEEEcccc
Q 008975 292 PNSYALVISMENIT 305 (547)
Q Consensus 292 ~~~~aLVVstE~~S 305 (547)
..+.+||++.|.+|
T Consensus 105 ~~d~vlv~G~E~~s 118 (394)
T PLN02644 105 INDVVVAGGMESMS 118 (394)
T ss_pred CCCEEEEEeEEecC
Confidence 99999999988765
No 77
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.00 E-value=1.2e-09 Score=117.60 Aligned_cols=93 Identities=17% Similarity=0.216 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++|+|||.+|+++. +....|..+.+++..+|++.++++++++ .+|++|+.++..|.+++++|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG 105 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQTG 105 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHcC
Confidence 466799999999999999999999999875 4556688888999999998678999999 59999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+.+||++.|.+|.
T Consensus 106 ~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 106 AADVVIAGGAESMSN 120 (404)
T ss_pred CCCEEEEeeehhhcc
Confidence 999999999999885
No 78
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=1.6e-09 Score=116.23 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|..++++|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~sG 105 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRAG 105 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHCC
Confidence 467799999999999999999999999875 3212345566789999997679999999 59999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+++||+++|.+|.
T Consensus 106 ~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 106 DASVIVAGGMESMSN 120 (393)
T ss_pred CCCEEEEEeeecccc
Confidence 999999999999885
No 79
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=98.98 E-value=2.3e-09 Score=115.29 Aligned_cols=94 Identities=11% Similarity=0.229 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCC-CChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPT-PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~-Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+.+|+.+|++++|+++|++|+|||.+|++|. +.... +..+.......|++.++++++++ ++|++|+.|+.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 4567799999999999999999999999875 43333 34566677888997679999999 699999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+++|++++|.+|+
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999986
No 80
>PRK06059 lipid-transfer protein; Provisional
Probab=98.94 E-value=3e-09 Score=114.34 Aligned_cols=92 Identities=12% Similarity=0.053 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-C-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-L-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|+++||+++|++++|||.||++++ + .+..+..+..+++++|++ ++++++++ .+|++++.+|..|.+++++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~s 101 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQILA 101 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHHC
Confidence 467799999999999999999999998754 2 333455678999999997 58899999 4999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+++||+++|..|.
T Consensus 102 G~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 102 GLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCEEEEEEEcccCC
Confidence 9999999999998763
No 81
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.92 E-value=8.4e-08 Score=103.44 Aligned_cols=187 Identities=13% Similarity=0.139 Sum_probs=111.7
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHH--HHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEAR--KEAE 213 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r--~ea~ 213 (547)
++|.|.|+|+-.|- -.+.+++.+.+.. +. + -++...+.-...++..+....-.....+....-...| ....
T Consensus 2 ~~VvITG~g~vtp~---G~~~~~~~~~L~~-g~-s--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTAL---GEDWQTIAARLKA-GR-N--AVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CC-C--CEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 47999999999997 4677888876542 11 0 0000000000012222211110000000000111111 1345
Q ss_pred HHHHHHHHHHHHhCCCC------CCCccEEEEeccCC-------------------C------CCCC-hHHHHHHHcCCC
Q 008975 214 AVMFGAIDELFAKTSVK------PKDIGILIVNCSLF-------------------N------PTPS-LSAMVINHYKLR 261 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~------p~dID~LIv~~s~~-------------------~------~~Ps-la~~I~~~lGl~ 261 (547)
.++..|+++||+++|++ ++++++++-++... . ..|+ .+..|...||++
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 154 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLK 154 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCC
Confidence 78899999999999983 23454544332110 0 1232 577899999998
Q ss_pred CceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc----c-----c-----------CC--CCcccccc
Q 008975 262 GNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----W-----Y-----------FG--NDRSKLVS 319 (547)
Q Consensus 262 ~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~----~-----~-----------~~--~dr~~lv~ 319 (547)
+ +++-++. +|++++.||..|.++|++|..+.+||.++|..+.. | . .+ .+|+
T Consensus 155 G--p~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~---- 227 (405)
T PRK09116 155 G--RVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRD---- 227 (405)
T ss_pred C--Ccccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCC----
Confidence 4 7888994 99999999999999999999999999999975420 0 0 00 1222
Q ss_pred ccccccceEEEEEeccC
Q 008975 320 NCLFRMGGAAILLSNRF 336 (547)
Q Consensus 320 ~~lFGDGAAAvLLs~~~ 336 (547)
..+.|+||+++||+...
T Consensus 228 G~v~gEGa~~~vLe~~~ 244 (405)
T PRK09116 228 GLVIGEGAGTLVLEELE 244 (405)
T ss_pred CEeeeccEEEEEEccHH
Confidence 36789999999998644
No 82
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.91 E-value=1.3e-07 Score=101.19 Aligned_cols=299 Identities=15% Similarity=0.154 Sum_probs=168.7
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCCCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV 215 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l 215 (547)
++|.|.|+|.--|- - . .+++.+.+.. -++||+.-+-.+ .....+ .........+...+
T Consensus 2 ~rVvITG~G~vsp~--G-~-~~~~~~~l~~----------------G~sgi~~~~~~~-~~~~~~-~~~~~~~~~~~~~~ 59 (381)
T PRK05952 2 MKVVVTGIGLVSAL--G-D-LEQSWQRLLQ----------------GKSGIKLHQPFP-ELPPLP-LGLIGNQPSSLEDL 59 (381)
T ss_pred CeEEEEeeEEECcc--c-C-HHHHHHHHHc----------------CCCCeEeCCccc-cccccc-ceeeccccccccHH
Confidence 46999999999997 3 3 7777765532 124443211000 000000 00000000011234
Q ss_pred HHHHHHHHHHhCCCCC--CCccEEEEeccCC----------------------------CCCC-ChHHHHHHHcCCCCce
Q 008975 216 MFGAIDELFAKTSVKP--KDIGILIVNCSLF----------------------------NPTP-SLSAMVINHYKLRGNI 264 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p--~dID~LIv~~s~~----------------------------~~~P-sla~~I~~~lGl~~~~ 264 (547)
+..|+++||+++|+++ +++++++-.+... ...| ..+..|...+|+++
T Consensus 60 ~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G-- 137 (381)
T PRK05952 60 TKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG-- 137 (381)
T ss_pred HHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC--
Confidence 5689999999999964 5666555332110 0122 24677899999985
Q ss_pred eEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEcc-ccCc----c-----------cCC-CCccccccccccccce
Q 008975 265 ISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN-ITLN----W-----------YFG-NDRSKLVSNCLFRMGG 327 (547)
Q Consensus 265 ~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~-~S~~----~-----------~~~-~dr~~lv~~~lFGDGA 327 (547)
+++.+.+ +|++++.||..|.++|+.|..+.+||.++|. .+.. + .+. .+|+ ..++||||
T Consensus 138 p~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~gEGa 212 (381)
T PRK05952 138 PVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLGEGG 212 (381)
T ss_pred ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----CccccccE
Confidence 7888994 9999999999999999999999999999996 3320 0 000 1233 36899999
Q ss_pred EEEEEeccCCCccc-cc-c-eeeeEEEeeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccccCCCcccc
Q 008975 328 AAILLSNRFSDRRR-SK-Y-RLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITTLGPLVLPM 404 (547)
Q Consensus 328 AAvLLs~~~~~~~~-a~-~-~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~lgp~vlP~ 404 (547)
++++|++.+...++ .+ | ++.+. ...+|+... ..+. . .++.
T Consensus 213 a~lvLe~~~~A~~rg~~i~a~I~g~---~~~~d~~~~---~~~~-~---------------~~~~--------------- 255 (381)
T PRK05952 213 AILVLESAELAQKRGAKIYGQILGF---GLTCDAYHM---SAPE-P---------------DGKS--------------- 255 (381)
T ss_pred EEEEEeeHHHHHhCCCceEEEEEEE---EecCCCCCC---CCCC-C---------------CHHH---------------
Confidence 99999875432111 11 2 22222 122232110 0000 0 0000
Q ss_pred hhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHHH-----HHHcCCCcccccccccccccccccccch
Q 008975 405 SEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDEL-----EKNLQLSDWHMEPSRMTLYRFGNTSSSS 479 (547)
Q Consensus 405 se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~v-----~k~LgL~~e~~e~S~~tl~r~GNtsSaS 479 (547)
.....++.++.+ ....+|||++..|..+...-|.. .+-++ +++. -..+=..+||+.+++
T Consensus 256 -------~~~ai~~Al~~a-----gi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~-v~s~K~~~GH~~~Aa 319 (381)
T PRK05952 256 -------AIAAIQQCLARS-----GLTPEDIDYIHAHGTATRLNDQREANLIQALFP---HRVA-VSSTKGATGHTLGAS 319 (381)
T ss_pred -------HHHHHHHHHHHh-----CCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCe-eecchhhhccChHHH
Confidence 000112233321 11257999999999887766544 34444 1221 012334689999998
Q ss_pred HHHHHHHH---HHcCCCCC---------------------CCEEEEEEecchhhheeEEEE
Q 008975 480 LWYELAYS---EAKGRIKK---------------------GDRTWQIAFGSGFKCNSAVWK 516 (547)
Q Consensus 480 i~~~La~~---~~~gri~~---------------------GDrVlliafGsG~~~~sav~r 516 (547)
-.+++... +++|.+.| =++++..+||-|-.-.++|++
T Consensus 320 G~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 320 GALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 77777653 34444322 246788889988777777765
No 83
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.90 E-value=6e-09 Score=112.97 Aligned_cols=93 Identities=14% Similarity=0.284 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++|+|||.+|++|. +....++.+..++..+|++.++++++++ .+|++++.++..|.+++++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~sG 106 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIALG 106 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHCC
Confidence 467799999999999999999999998864 3223467788899999997568999999 59999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+++||+++|.+|.
T Consensus 107 ~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 107 RADLVLAGGVEAMSH 121 (426)
T ss_pred CCCEEEEEEEecccC
Confidence 999999999998775
No 84
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.87 E-value=8e-09 Score=110.90 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHH-HHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAM-VINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~-I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+.+++.+|++++|+++|++|+|||.+|+++. ++...+..+.+ +++.+|+. ++++++++ .+|++|+.++..|.++++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999875 44434555553 67888886 79999999 599999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
No 85
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.86 E-value=1.3e-07 Score=101.16 Aligned_cols=92 Identities=12% Similarity=0.223 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|++++|+++|++|+|||.+|+++.. ... .+..+..+.-..|++..+.++.++ .+|++++.++..|.+.|++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~s 105 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVMS 105 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHHC
Confidence 4677999999999999999999999987642 111 133444444467776568889999 5999999999999999999
Q ss_pred CCCCeEEEEEEcccc
Q 008975 291 HPNSYALVISMENIT 305 (547)
Q Consensus 291 g~~~~aLVVstE~~S 305 (547)
|..+.+||++.|.+|
T Consensus 106 G~~d~vLv~G~e~ms 120 (382)
T PRK07801 106 GTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCEEEEcchhhhc
Confidence 999999999998553
No 86
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.85 E-value=1.4e-06 Score=93.63 Aligned_cols=206 Identities=16% Similarity=0.072 Sum_probs=125.6
Q ss_pred CChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc--------------ccCC--
Q 008975 248 PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN--------------WYFG-- 311 (547)
Q Consensus 248 Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~--------------~~~~-- 311 (547)
++.+..|+..||+++ .++.+. .||++++.||..|.++|++|..+++||+++|..+.. +..+
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--Cccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 357888999999974 788899 599999999999999999999999999999965431 0001
Q ss_pred CCccccccccccccceEEEEEeccCCCcccccceeeeEEEeeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhh
Q 008975 312 NDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALK 391 (547)
Q Consensus 312 ~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk 391 (547)
.+++ ..++||||+++||++.+.. .-++.+. -..+|... ...+ +++ +.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g~---g~~~d~~~---~~~~-~~~---------------~~--- 260 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLGV---GESSDAHH---MSAP-HPE---------------GL--- 260 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEEE---EEeCCCCC---CCCC-CCC---------------HH---
Confidence 1222 3689999999999986221 2233332 11222211 0000 000 00
Q ss_pred ccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHH-----HHHHcCCCcccccccc
Q 008975 392 TNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE-----LEKNLQLSDWHMEPSR 466 (547)
Q Consensus 392 ~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~-----v~k~LgL~~e~~e~S~ 466 (547)
.. ....++.++.+ ....+|||++..|..+...-|. +.+.++-.. .+.
T Consensus 261 ---------------~~----~~a~~~Al~~A-----gl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~--- 312 (392)
T PRK09185 261 ---------------GA----ILAMQQALADA-----GLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS--- 312 (392)
T ss_pred ---------------HH----HHHHHHHHHHc-----CCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee---
Confidence 00 00112333332 2225799999999988765443 344454211 121
Q ss_pred cccccccccccchHHHHHHHHH---HcCCCC------------------------CCCEEEEEEecchhhheeEEEEE
Q 008975 467 MTLYRFGNTSSSSLWYELAYSE---AKGRIK------------------------KGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 467 ~tl~r~GNtsSaSi~~~La~~~---~~gri~------------------------~GDrVlliafGsG~~~~sav~r~ 517 (547)
.+=..+||+.+++-..++.... ++|.+. +-++++..+||-|-.-.+++++.
T Consensus 313 s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 313 STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 2234479999998777775433 233221 13567888899888777888764
No 87
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=98.85 E-value=9.5e-09 Score=110.47 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
++|+.+|++++|+++|++|+|||.+|+++. +.....+.+......+|++.++++++++ ++|++|+.|+..|.+++++|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~sG 110 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVAG 110 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHCC
Confidence 467799999999999999999999999865 3333334444455567777679999999 69999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+.+||++.|.+|.
T Consensus 111 ~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 111 SVDVIVAGGMESMTN 125 (397)
T ss_pred CCCEEEEEeeeccCC
Confidence 999999999999884
No 88
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.85 E-value=5.6e-07 Score=98.03 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCC-----CccEEEEeccC-CC-----------------C--------CC-ChHHHHHHHcC
Q 008975 212 AEAVMFGAIDELFAKTSVKPK-----DIGILIVNCSL-FN-----------------P--------TP-SLSAMVINHYK 259 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~-----dID~LIv~~s~-~~-----------------~--------~P-sla~~I~~~lG 259 (547)
...++..|+.+||+++|+++. +...++++++. .. . .+ ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 457899999999999998542 34556665431 10 0 12 24668999999
Q ss_pred CCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc-----c-----------------cCC--CCcc
Q 008975 260 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----W-----------------YFG--NDRS 315 (547)
Q Consensus 260 l~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~-----~-----------------~~~--~dr~ 315 (547)
++ -.++-+++ +|++++.||..|.++|++|..+.+||.++|..... + ..+ .+++
T Consensus 173 l~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~ 249 (437)
T PLN02836 173 FQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRD 249 (437)
T ss_pred CC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCC
Confidence 97 47888884 99999999999999999999999999998863110 0 000 1122
Q ss_pred ccccccccccceEEEEEeccC
Q 008975 316 KLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 316 ~lv~~~lFGDGAAAvLLs~~~ 336 (547)
.+..||||+|+||++.+
T Consensus 250 ----G~~~gEGaaalVLe~~~ 266 (437)
T PLN02836 250 ----GFVIGEGAGVLVLEELE 266 (437)
T ss_pred ----CeeeecCEEEEEEeeHH
Confidence 36789999999998754
No 89
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.83 E-value=4.6e-07 Score=100.95 Aligned_cols=117 Identities=16% Similarity=0.168 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCC--------CccEEEEeccC-C------------------CC------CC-ChHHHHHHH
Q 008975 212 AEAVMFGAIDELFAKTSVKPK--------DIGILIVNCSL-F------------------NP------TP-SLSAMVINH 257 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~--------dID~LIv~~s~-~------------------~~------~P-sla~~I~~~ 257 (547)
...++..|++++|+.+|++++ .+++ +++++. . .| .+ ..+.+|...
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV-~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGV-LIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEE-EEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 457889999999999998754 3344 444321 0 01 11 235689999
Q ss_pred cCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccc-cC-c---c-----c-----------CC--CCc
Q 008975 258 YKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TL-N---W-----Y-----------FG--NDR 314 (547)
Q Consensus 258 lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~-S~-~---~-----~-----------~~--~dr 314 (547)
+|++ -.++.+++ +|++++.||..|.++|+.|..+.+||.++|.. +. . | . .+ .+|
T Consensus 278 ~gl~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 47888884 99999999999999999999999999999962 21 0 0 0 00 122
Q ss_pred cccccccccccceEEEEEeccC
Q 008975 315 SKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 315 ~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
+ ..++|+||+++||+..+
T Consensus 355 d----Gfv~GEGAa~lVLE~~e 372 (540)
T PLN02787 355 D----GFVMGEGAGVLLLEELE 372 (540)
T ss_pred C----CcccccceEEEEEeeHH
Confidence 3 46789999999999654
No 90
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.82 E-value=7.5e-07 Score=95.92 Aligned_cols=117 Identities=15% Similarity=0.145 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC-----ccEEEEeccC-C-----------------CCC--------C-ChHHHHHHHcC
Q 008975 212 AEAVMFGAIDELFAKTSVKPKD-----IGILIVNCSL-F-----------------NPT--------P-SLSAMVINHYK 259 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~d-----ID~LIv~~s~-~-----------------~~~--------P-sla~~I~~~lG 259 (547)
...++..|++++|+++|+++++ +++ +++++. . ... + ..+..|...+|
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGV-VTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEE-EEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 4678899999999999998654 444 443321 1 001 1 24678999999
Q ss_pred CCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc----------ccC----------C--CCcccc
Q 008975 260 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN----------WYF----------G--NDRSKL 317 (547)
Q Consensus 260 l~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~----------~~~----------~--~dr~~l 317 (547)
+++ +++-+. .+|++++.||..|.++|+.|. +.+||.+.|..... ... + .+++
T Consensus 150 l~G--p~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~-- 223 (399)
T cd00832 150 MRG--PSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAA-- 223 (399)
T ss_pred CCC--Cccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCC--
Confidence 984 778888 499999999999999999999 99999999873210 000 0 1122
Q ss_pred ccccccccceEEEEEeccCC
Q 008975 318 VSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 318 v~~~lFGDGAAAvLLs~~~~ 337 (547)
..+.|+||++++|++...
T Consensus 224 --G~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 224 --GYVPGEGGAILVLEDAAA 241 (399)
T ss_pred --CEeeeceEEEEEEeeHHH
Confidence 368899999999987653
No 91
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.81 E-value=1.9e-08 Score=102.47 Aligned_cols=95 Identities=16% Similarity=0.235 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.++|+..|++++|++++++|++||.++++|. +....+..+..+.-..|++.+++++.++ +.|++|+.|+..|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 4577899999999999999999999999985 3344677888888899998889999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccCc
Q 008975 291 HPNSYALVISMENITLN 307 (547)
Q Consensus 291 g~~~~aLVVstE~~S~~ 307 (547)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999873
No 92
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.79 E-value=1.7e-06 Score=93.40 Aligned_cols=311 Identities=14% Similarity=0.171 Sum_probs=172.9
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcC-CCChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHH--HHH
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTG-TFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEAR--KEA 212 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~-~~~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r--~ea 212 (547)
++|.|.++|+..|- -.+.+++.+.+..-. .+.+- .+ ++.++...+.....+. ......+....| ...
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~G~sgi~~~-----~~-~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLREGRSGITFS-----PE-FAEMGMRSQVWGNVKL-DPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHcCCCceeEC-----Cc-ccccCCCCceEEEcCC-ChhhcCCHHHhhcCCHH
Confidence 58999999999997 477788887653200 00000 00 1112222221111100 000000111111 124
Q ss_pred HHHHHHHHHHHHHhCCCCCC-----CccEEEEeccCC------------------C--------CCC-ChHHHHHHHcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPK-----DIGILIVNCSLF------------------N--------PTP-SLSAMVINHYKL 260 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~-----dID~LIv~~s~~------------------~--------~~P-sla~~I~~~lGl 260 (547)
..++..|++++|+.+|++++ .+++++-.+... . ..| ..+..|...||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 57789999999999998753 354444332110 0 111 257789999999
Q ss_pred CCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCccc---------------------CC--CCcccc
Q 008975 261 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWY---------------------FG--NDRSKL 317 (547)
Q Consensus 261 ~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~---------------------~~--~dr~~l 317 (547)
++ +++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..+. .+ .+|+
T Consensus 152 ~G--p~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~-- 226 (406)
T PRK07967 152 KG--VNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRD-- 226 (406)
T ss_pred CC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCC--
Confidence 84 777889 59999999999999999999999999999987543110 00 1222
Q ss_pred ccccccccceEEEEEeccCCCcccccceeeeEEE-eeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccccc
Q 008975 318 VSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVR-THKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNITT 396 (547)
Q Consensus 318 v~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~-t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~~ 396 (547)
..+.|+||+++||+..+....+ +-++...+. ....+|+. . +..+ . ++
T Consensus 227 --G~v~gEGaa~lvLe~~~~A~~r-ga~i~a~i~G~g~~~d~~--~-~~~p----------------~--~~-------- 274 (406)
T PRK07967 227 --GFVIAGGGGVVVVEELEHALAR-GAKIYAEIVGYGATSDGY--D-MVAP----------------S--GE-------- 274 (406)
T ss_pred --ceeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEECCCCC--C-CCCC----------------C--HH--------
Confidence 3578999999999865432111 112222221 11112221 0 1110 0 10
Q ss_pred cCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHH-----HHHHcCCCccccccccccccc
Q 008975 397 LGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE-----LEKNLQLSDWHMEPSRMTLYR 471 (547)
Q Consensus 397 lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~-----v~k~LgL~~e~~e~S~~tl~r 471 (547)
. ..+.++.+++. +. .|||++..|..|...-|. +.+-+|-..-.+ -.+=..
T Consensus 275 ----------~--------~~~a~~~Al~~-~~---~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v---~s~K~~ 329 (406)
T PRK07967 275 ----------G--------AVRCMQMALAT-VD---TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAI---SATKSL 329 (406)
T ss_pred ----------H--------HHHHHHHHHhC-CC---CCccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCee---ECcccc
Confidence 0 01233334433 22 399999999987765554 455565321112 123345
Q ss_pred ccccccchHHHHHHH---HHHcCCCC-------------------------CCCEEEEEEecchhhheeEEEEEe
Q 008975 472 FGNTSSSSLWYELAY---SEAKGRIK-------------------------KGDRTWQIAFGSGFKCNSAVWKAL 518 (547)
Q Consensus 472 ~GNtsSaSi~~~La~---~~~~gri~-------------------------~GDrVlliafGsG~~~~sav~r~~ 518 (547)
+||+.+++-..++.. ++++|.+. +-++++.-+||-|-.-.++|++..
T Consensus 330 ~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 330 TGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred cccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 899998887776642 23333221 224677888998877778887753
No 93
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.79 E-value=6e-07 Score=97.24 Aligned_cols=251 Identities=16% Similarity=0.101 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCccE----EEEeccCCC------------------C--------CC-ChHHHHHHHcC
Q 008975 212 AEAVMFGAIDELFAKTSVK-PKDIGI----LIVNCSLFN------------------P--------TP-SLSAMVINHYK 259 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~-p~dID~----LIv~~s~~~------------------~--------~P-sla~~I~~~lG 259 (547)
..+++..|+++||+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4578899999999999998 665543 333322110 0 11 24667888999
Q ss_pred CCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcc----------c------------C--CCCcc
Q 008975 260 LRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNW----------Y------------F--GNDRS 315 (547)
Q Consensus 260 l~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~----------~------------~--~~dr~ 315 (547)
+++ +++.+. .+|++++.||..|.++|++|..+.+||.++|.....+ . . ..+++
T Consensus 157 l~G--p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~ 233 (421)
T PTZ00050 157 LKG--PSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRA 233 (421)
T ss_pred CCC--cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCC
Confidence 974 778888 5999999999999999999999999999999732100 0 0 01122
Q ss_pred ccccccccccceEEEEEeccCCCcccccceeeeEEE-eeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhccc
Q 008975 316 KLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVR-THKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNI 394 (547)
Q Consensus 316 ~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~-t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni 394 (547)
..+.||||+|+||++.+...++. -.+...+. ....+|+.. ...+. . .+.
T Consensus 234 ----G~~~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~d~~~---~~~p~-~---------------~~~------ 283 (421)
T PTZ00050 234 ----GFVMGEGAGILVLEELEHALRRG-AKIYAEIRGYGSSSDAHH---ITAPH-P---------------DGR------ 283 (421)
T ss_pred ----CEeeccceEEEEEeeHHHHHHCC-CeEEEEEEEEEEcCCCCC---CCCCC-C---------------ChH------
Confidence 46789999999998754321111 12222211 111122110 00000 0 000
Q ss_pred cccCCCcccchhhHHHHHHHHHHHHHHh-hhccccccccccccEEEeccCCHHHHH-----HHHHHcCCCc-cccccccc
Q 008975 395 TTLGPLVLPMSEQLLFFATLVGKKLFKM-KIKPYIPDFKLAFEHFCIHAGGRAVLD-----ELEKNLQLSD-WHMEPSRM 467 (547)
Q Consensus 395 ~~lgp~vlP~se~~~~~~~~~~r~v~~~-a~~~~ip~~~~did~f~~H~~gr~vl~-----~v~k~LgL~~-e~~e~S~~ 467 (547)
. .....++.++. + ....+|||++.+|..+...-| .+.+-+|-.. +.+. --.
T Consensus 284 ------------~----~~~ai~~Al~~~A-----gi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~-v~s 341 (421)
T PTZ00050 284 ------------G----ARRCMENALKDGA-----NININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLY-VSS 341 (421)
T ss_pred ------------H----HHHHHHHHHHhcc-----CCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCce-EEC
Confidence 0 00011334443 2 112579999999998875543 3444455322 2221 012
Q ss_pred ccccccccccchHHHHHHHH---HHcCCCC--------------------------CCCEEEEEEecchhhheeEEEEE
Q 008975 468 TLYRFGNTSSSSLWYELAYS---EAKGRIK--------------------------KGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 468 tl~r~GNtsSaSi~~~La~~---~~~gri~--------------------------~GDrVlliafGsG~~~~sav~r~ 517 (547)
+=..+||+.+++=.+++... +++|.+. +=.+++..+||-|-.-.++|++.
T Consensus 342 ~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 342 TKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 33468999988877777653 3343321 11467888999887777888763
No 94
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.79 E-value=1.9e-08 Score=107.91 Aligned_cols=90 Identities=9% Similarity=0.032 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNP--TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~--~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++.+ ||+++..++..|..++++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~s 107 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVAS 107 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHhC
Confidence 3667999999999999999999999998643322 466888899999997 488999994 899999999999999999
Q ss_pred CCCCeEEEEEEccc
Q 008975 291 HPNSYALVISMENI 304 (547)
Q Consensus 291 g~~~~aLVVstE~~ 304 (547)
|..++||||+.|..
T Consensus 108 G~ad~vLVvg~e~~ 121 (392)
T PRK06065 108 GLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCEEEEEEeecc
Confidence 99999999999974
No 95
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.77 E-value=2.1e-06 Score=93.04 Aligned_cols=314 Identities=14% Similarity=0.088 Sum_probs=174.4
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcCC--CChHhHHHHHHHHHHhCCceEE--ecCCcccCCCCCcchHHHH--
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTGT--FTEENLQFQKKILERSGLGDST--YLPEAVLNIPPNPSMKEAR-- 209 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~~--~~~~~~~f~~rI~~~sGI~er~--~~~~~~~~~~~~~~ma~~r-- 209 (547)
++|.|.|+|+-.|- -.+.++|.+.+.. |. +.+-. ++ -.++.++..+. .++.+. . +..+-.++|
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~-~~---~~~~~~~~~~~~g~i~~~~-d--~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLD-DP---FVEEFDLPVRIGGHLLEEF-D--HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCC-hh---hhhccCCCcceEEEeccCc-c--ccCCHHHHhhc
Confidence 58999999999998 4688888887643 11 11000 00 01112222221 111111 0 011112222
Q ss_pred HHHHHHHHHHHHHHHHhCCC---CCCCccEEEEeccCCC-------------------------CCC-ChHHHHHHHcCC
Q 008975 210 KEAEAVMFGAIDELFAKTSV---KPKDIGILIVNCSLFN-------------------------PTP-SLSAMVINHYKL 260 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi---~p~dID~LIv~~s~~~-------------------------~~P-sla~~I~~~lGl 260 (547)
.....++..|+.++|+.+|+ +++++++++-.+.... ..| ..+..+...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23457889999999999995 5666766654332100 012 245678888888
Q ss_pred CCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc-----c------cC-----C--------CCccc
Q 008975 261 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----W------YF-----G--------NDRSK 316 (547)
Q Consensus 261 ~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~-----~------~~-----~--------~dr~~ 316 (547)
++ .++.+. .+|++++.||..|.++|+.|..+.++|.++|..... + .. . .+++
T Consensus 161 ~G--~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~- 236 (418)
T PRK07910 161 KA--GVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRD- 236 (418)
T ss_pred CC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCC-
Confidence 74 567778 599999999999999999999999999999974210 0 10 0 0122
Q ss_pred cccccccccceEEEEEeccCCCcccccceeee-EEEeeecCCCCcccceeeccCCCCccccccchhhHHHhhhhhhcccc
Q 008975 317 LVSNCLFRMGGAAILLSNRFSDRRRSKYRLVH-TVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNIT 395 (547)
Q Consensus 317 lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~-~v~t~~~sd~~~~~~v~~~ed~~G~~g~~Lskdl~~v~g~~lk~ni~ 395 (547)
..++|+|++++||++.....++. .++.. +......+|+.. ...+ ++. +.
T Consensus 237 ---G~v~gEGaa~vvLe~~~~A~~rg-~~i~a~i~g~~~~~dg~~---~~~~-~~~---------------~~------- 286 (418)
T PRK07910 237 ---GFVFGEGGALMVIETEEHAKARG-ANILARIMGASITSDGFH---MVAP-DPN---------------GE------- 286 (418)
T ss_pred ---CEeeeceEEEEEEeeHHHHHhCC-CcEEEEEEEEEEecCCCC---CCCC-CCC---------------HH-------
Confidence 46899999999998755322111 11221 112222233221 0011 000 00
Q ss_pred ccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHH-----HHHHHcCCCcccccccccccc
Q 008975 396 TLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLD-----ELEKNLQLSDWHMEPSRMTLY 470 (547)
Q Consensus 396 ~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~-----~v~k~LgL~~e~~e~S~~tl~ 470 (547)
. .....++.++.+ ....+|||++..|..+...-| .+.+-+|-..-.+ ..+=.
T Consensus 287 -----------~----~~~a~~~Al~~a-----gi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~ 343 (418)
T PRK07910 287 -----------R----AGHAMTRAIELA-----GLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKS 343 (418)
T ss_pred -----------H----HHHHHHHHHHHh-----CCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCccc
Confidence 0 000112233321 122579999999998875544 4556666321112 13345
Q ss_pred cccccccchHHHHHHHH---HHcCCC----------------------CCC--CEEEEEEecchhhheeEEEEE
Q 008975 471 RFGNTSSSSLWYELAYS---EAKGRI----------------------KKG--DRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 471 r~GNtsSaSi~~~La~~---~~~gri----------------------~~G--DrVlliafGsG~~~~sav~r~ 517 (547)
.+||+.+++=.++|... +++|.+ +++ .+++.-+||-|-.-.+++++.
T Consensus 344 ~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 344 ALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred cccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 58999988877665432 333332 111 356777888887777777763
No 96
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.72 E-value=9.5e-07 Score=97.70 Aligned_cols=91 Identities=13% Similarity=0.015 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVK--PKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~--p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|+++||+++|++ ++|||.+++++............+++++|+.+ ....... .||+++..++..|...+++
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ias 105 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIAA 105 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHHC
Confidence 467799999999999999 99999998764321222334578999999974 4455555 6899999999999999999
Q ss_pred CCCCeEEEEEEcccc
Q 008975 291 HPNSYALVISMENIT 305 (547)
Q Consensus 291 g~~~~aLVVstE~~S 305 (547)
|..+.|||+++|..+
T Consensus 106 G~advVLv~G~E~~~ 120 (498)
T PRK08257 106 GEADVALVAGAEAQS 120 (498)
T ss_pred CCCCEEEEeeeeecc
Confidence 999999999999753
No 97
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.69 E-value=8e-08 Score=103.44 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSL--FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 212 a~~l~~~Aa~~aL~k-agi~p~dID~LIv~~s~--~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
+++|+..|++++|+| +|++|+|||.+|++|.. ....+..+.++..+.||+.+++++.++ +.|++|+.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 457779999999998 49999999999998753 222377889999999999789999999 69999999999999999
Q ss_pred hcCCCCeEEEEEEccccC
Q 008975 289 QVHPNSYALVISMENITL 306 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~ 306 (547)
++|..+.+|+++.|.+|+
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 98
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.67 E-value=6.5e-08 Score=105.05 Aligned_cols=94 Identities=12% Similarity=0.218 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|++++|+++|++|++||.+|+++..... .+.++.++....|++..++++.++ ++|++|+.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 34677999999999999999999999999753222 355677899999998669999999 6999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999885
No 99
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.67 E-value=9.3e-08 Score=104.37 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCC-hHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPS-LSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Ps-la~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
.+|+.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|+++.+++++++ .+|++|+.++..|...+++
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~s 150 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIKA 150 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHHc
Confidence 467799999999999999999999999865 4443344 344666788998668999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+||++.|.+|.
T Consensus 151 G~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 151 GFYDIGIGAGVESMTT 166 (452)
T ss_pred CCCCeEEEEeEEecCC
Confidence 9999999999999875
No 100
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=1.1e-07 Score=102.73 Aligned_cols=92 Identities=13% Similarity=0.205 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCccEEEEecc-CC-CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 213 EAVMFGAIDELFAKT-SVKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 213 ~~l~~~Aa~~aL~ka-gi~p~dID~LIv~~s-~~-~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.+|+.+|+++||+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++ .+|++|..++..|.++++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I~ 105 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAIK 105 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHHH
Confidence 467799999999996 999999999998753 22 22356678899999996 68999999 599999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+||++.|.+|.
T Consensus 106 sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 106 AGEGDVFISAGVETVSR 122 (406)
T ss_pred CCCCCEEEEeeEEeccc
Confidence 99999999999998765
No 101
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.1e-07 Score=102.05 Aligned_cols=91 Identities=16% Similarity=0.191 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CC-C-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FN-P-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~-~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.+|+.+|++++|+++|++++|||.+++++.. .. . .+..+..+...+|++ ++++++++ ++|++++.+|..|..+++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I~ 100 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAIE 100 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHHH
Confidence 4677999999999999999999999988642 11 1 111122344466776 68899999 699999999999999999
Q ss_pred cCCCCeEEEEEEcccc
Q 008975 290 VHPNSYALVISMENIT 305 (547)
Q Consensus 290 sg~~~~aLVVstE~~S 305 (547)
+|..+++||++.|..|
T Consensus 101 sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 101 AGRARIVLVVGAEKMT 116 (389)
T ss_pred CCCCCEEEEEEehhhc
Confidence 9999999999999865
No 102
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.65 E-value=9.9e-08 Score=95.37 Aligned_cols=120 Identities=20% Similarity=0.359 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC------ccEEEEeccCCC-----------------C------CCC-hHHHHHHHcCC
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKD------IGILIVNCSLFN-----------------P------TPS-LSAMVINHYKL 260 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~d------ID~LIv~~s~~~-----------------~------~Ps-la~~I~~~lGl 260 (547)
....++..|+.+||+++|+++++ +++++-++..++ + .|+ .+..|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 46789999999999999999843 445553332210 1 232 47789999999
Q ss_pred CCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEc-cccC---------cccCCC------Cccccccccccc
Q 008975 261 RGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISME-NITL---------NWYFGN------DRSKLVSNCLFR 324 (547)
Q Consensus 261 ~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE-~~S~---------~~~~~~------dr~~lv~~~lFG 324 (547)
++ +++-+++ +|++++.||+.|.++|++|..+.+||.++| .++. .....+ |+.. ...++|
T Consensus 166 ~G--~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 RG--PSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp -S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred CC--ccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 85 6777885 999999999999999999999999999999 4443 111111 1111 247899
Q ss_pred cceEEEEEecc
Q 008975 325 MGGAAILLSNR 335 (547)
Q Consensus 325 DGAAAvLLs~~ 335 (547)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999863
No 103
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.63 E-value=1.2e-07 Score=102.07 Aligned_cols=94 Identities=13% Similarity=0.177 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC--CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 212 a~~l~~~Aa~~aL~k-agi~p~dID~LIv~~s~~--~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
+++|+.+|++++|+| +|++|++||.+++++... ...+..+..+....|++.+++++.++ ++|++|..|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 357779999999996 699999999999986532 21366777899999998789999999 69999999999999999
Q ss_pred hcCCCCeEEEEEEccccC
Q 008975 289 QVHPNSYALVISMENITL 306 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~ 306 (547)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999985
No 104
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.62 E-value=1.5e-07 Score=101.04 Aligned_cols=94 Identities=12% Similarity=0.211 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+.+|+.+|++++|+++|++|+|||.++++|.. ... ....+..+....|++.+++++.++ ++|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 35777999999999999999999999998753 222 234566778889998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 105
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.61 E-value=9.8e-08 Score=102.49 Aligned_cols=94 Identities=18% Similarity=0.291 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
+++|+.+|++++|+++|++|+|||.+++++.. ....+..+.+++...|++.+++++.++ .+|++|+.|+..|..++++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 55777999999999999999999999998653 222456677788999998679999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999999885
No 106
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.61 E-value=1.4e-07 Score=101.65 Aligned_cols=90 Identities=19% Similarity=0.152 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCC-----CChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPT-----PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~-----Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~ 286 (547)
.+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. ++++++++ .+|++++.+|..|..
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa~ 102 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAMA 102 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHHH
Confidence 356699999999999999999999998854 43222 22223222 3443 46799999 599999999999999
Q ss_pred HHhcCCCCeEEEEEEccccC
Q 008975 287 LLQVHPNSYALVISMENITL 306 (547)
Q Consensus 287 lL~sg~~~~aLVVstE~~S~ 306 (547)
++++|..+++||+++|..|.
T Consensus 103 ~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 103 DLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHcCCCCEEEEEEEEecCC
Confidence 99999999999999998653
No 107
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=2e-07 Score=100.47 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CC-CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~-~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.++|+.+|++++|+++|++|+|||.+++++. +. ...+..+.++....|++..++++.++ ++|++|+.|+..|...++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 4577899999999999999999999999865 22 22356677799999998679999999 599999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999885
No 108
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.60 E-value=1.8e-07 Score=100.78 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSL--FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 212 a~~l~~~Aa~~aL~k-agi~p~dID~LIv~~s~--~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
+++|+.+|++++|++ +|++|+|||.+++++.. ....+..+..+...+|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 457779999999996 69999999999998643 222366778899999998779999999 59999999999999999
Q ss_pred hcCCCCeEEEEEEccccC
Q 008975 289 QVHPNSYALVISMENITL 306 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~ 306 (547)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999985
No 109
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=2.2e-07 Score=99.61 Aligned_cols=94 Identities=15% Similarity=0.241 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
+.+|+.+|++++|+++|++|+|||.+|+++.. ....+..+.+++..+|++.+++++.++ .+|++++.++..|...+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 35677999999999999999999999988642 112344567899999997568999999 5999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898773
No 110
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.56 E-value=2e-07 Score=101.30 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|+.+|++++|+++|++|++||.+|+++.. ....+.++.++.-..|++..++++.++ ++|++|+.|+.+|.+++++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 35677999999999999999999999998753 222355667777778998779999999 6999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 111
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.55 E-value=5.1e-06 Score=87.80 Aligned_cols=119 Identities=13% Similarity=0.084 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCccEEEEeccCC-----------------CCCC---------ChHHHHHHHcCCCCc
Q 008975 212 AEAVMFGAIDELFAKTSV--KPKDIGILIVNCSLF-----------------NPTP---------SLSAMVINHYKLRGN 263 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi--~p~dID~LIv~~s~~-----------------~~~P---------sla~~I~~~lGl~~~ 263 (547)
..+++..|++++++.+|+ +++++++++-.+... ...| ..+..|...+|+++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 346778999999999995 677887777543211 0011 25678899999985
Q ss_pred eeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCc-----c-----cC--------------CCCcccccc
Q 008975 264 IISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLN-----W-----YF--------------GNDRSKLVS 319 (547)
Q Consensus 264 ~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~-----~-----~~--------------~~dr~~lv~ 319 (547)
+++-++ .+|++++.||..|.++|+.|..+.+||.++|..... | .. ..+|+
T Consensus 83 -p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~---- 156 (342)
T PRK14691 83 -PIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD---- 156 (342)
T ss_pred -Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----
Confidence 788888 499999999999999999999999999999873210 0 00 01223
Q ss_pred ccccccceEEEEEeccCC
Q 008975 320 NCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 320 ~~lFGDGAAAvLLs~~~~ 337 (547)
..++||||+++||+....
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 367899999999986543
No 112
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.53 E-value=4.1e-07 Score=97.67 Aligned_cols=94 Identities=13% Similarity=0.230 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSL-FNP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~-~~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.++|+.+|++++|+++|++|+|||.+|+++.. ... .+..+..+.-.-||+.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 45777999999999999999999999998753 221 245555555555887689999999 599999999999999999
Q ss_pred cCCCCeEEEEEEccccC
Q 008975 290 VHPNSYALVISMENITL 306 (547)
Q Consensus 290 sg~~~~aLVVstE~~S~ 306 (547)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999999885
No 113
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.50 E-value=5.2e-07 Score=97.10 Aligned_cols=92 Identities=20% Similarity=0.175 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~-~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++++|||.+++++... +........+.+.+|++ ..+++.+. ++|++++.++..|...+++|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~sG 105 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVASG 105 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHCC
Confidence 46779999999999999999999999876421 21122235688899998 48899999 59999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+.+||++.|..|.
T Consensus 106 ~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 106 AYDIALALGVEKLKD 120 (398)
T ss_pred CCCEEEEEEEeeccc
Confidence 999999999998753
No 114
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.49 E-value=4.3e-07 Score=97.39 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSLF-NP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 212 a~~l~~~Aa~~aL~k-agi~p~dID~LIv~~s~~-~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
+++++..+++++|++ +|++|+|||.+++++... .. .+..+..+....|++.+++++.++ .+|++|+.|+.+|..++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 356779999999997 699999999999997542 22 245566788899998679999999 59999999999999999
Q ss_pred hcCCCCeEEEEEEccccC
Q 008975 289 QVHPNSYALVISMENITL 306 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~ 306 (547)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999875
No 115
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.48 E-value=8.3e-06 Score=87.89 Aligned_cols=183 Identities=15% Similarity=0.086 Sum_probs=112.7
Q ss_pred CCCeEEEEEeEEcCCCCceecHHHHHHHhhh--cC-CCChHhHHHHHHHHHHhCC-ceEEecCCcccCCCCCcchHHHHH
Q 008975 135 PRPVYLVDFSCYKPEESRKCTKRIFMDQSRM--TG-TFTEENLQFQKKILERSGL-GDSTYLPEAVLNIPPNPSMKEARK 210 (547)
Q Consensus 135 ~~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~--~~-~~~~~~~~f~~rI~~~sGI-~er~~~~~~~~~~~~~~~ma~~r~ 210 (547)
+++|.|.|+|+-.|- -.+.+++.+.+.. .+ .++... |- . ...+. ++- .... ..+..... ....
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~G~sg~~~~~~~--~~--~-~~~~~~~~~---~~~~-~~~~~~~~-r~~~ 71 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSAGRPQPNVDTET--FA--P-YPVHPLPEI---DWSQ-QIPKRGDQ-RQME 71 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHcCCCCCCCCccc--cc--C-cCccccccc---Chhh-cCCchhhh-hccC
Confidence 668999999999987 4778888886632 11 111100 00 0 00000 000 0000 00100000 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCC-----CCccEEEEeccCC--C-----------------------------------CCC
Q 008975 211 EAEAVMFGAIDELFAKTSVKP-----KDIGILIVNCSLF--N-----------------------------------PTP 248 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p-----~dID~LIv~~s~~--~-----------------------------------~~P 248 (547)
....++..|++++|+++|+++ +++++++-.+... . ..|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 355788999999999999853 3455555443211 0 012
Q ss_pred -ChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccc-cC---------cccC------C
Q 008975 249 -SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TL---------NWYF------G 311 (547)
Q Consensus 249 -sla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~-S~---------~~~~------~ 311 (547)
..+..|...+|+++ +++-+++ +|++++.||..|.++|++|..+.+||.++|.. +. .... .
T Consensus 152 n~~a~~is~~~gl~G--p~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVTG--SSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCCC--ccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 24677899999985 7888994 99999999999999999999999999999862 21 0110 0
Q ss_pred C-----CccccccccccccceEEEEEeccCC
Q 008975 312 N-----DRSKLVSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 312 ~-----dr~~lv~~~lFGDGAAAvLLs~~~~ 337 (547)
. +|+ ..+.|+||+++||++.+.
T Consensus 229 ~d~~~~~r~----G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 229 WSRGGEDGG----GFILGSGGAFLVLESREH 255 (398)
T ss_pred hccCccCCC----CeeeeceEEEEEEeeHHH
Confidence 1 233 367899999999997553
No 116
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.47 E-value=2.1e-05 Score=100.73 Aligned_cols=254 Identities=15% Similarity=0.131 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHhCCCC----CCCccEEEEeccCCC-----------------------------------------
Q 008975 211 EAEAVMFGAIDELFAKTSVK----PKDIGILIVNCSLFN----------------------------------------- 245 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~----p~dID~LIv~~s~~~----------------------------------------- 245 (547)
....++.+++.++|+++|+. .+.+++++-++...+
T Consensus 92 pqqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (2582)
T TIGR02813 92 ISQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIH 171 (2582)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcccccc
Confidence 34578899999999999984 455666654332100
Q ss_pred ----CCC-----ChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccc-cCcc-------
Q 008975 246 ----PTP-----SLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENI-TLNW------- 308 (547)
Q Consensus 246 ----~~P-----sla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~-S~~~------- 308 (547)
..| ..+.+|.++||+++ +++-+. .+||+++.||++|.+.|++|..+.+||.+.+.. +...
T Consensus 172 ~~~~~~~g~~~n~~A~RIS~~f~L~G--ps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~ 248 (2582)
T TIGR02813 172 WEENSFPGSLGNVISGRIANRFDLGG--MNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKT 248 (2582)
T ss_pred cCccccccccccHHHHHHHHHhCCCC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhc
Confidence 011 24788999999985 788899 599999999999999999999999999988763 2110
Q ss_pred --cC--C------CCccccccccccccceEEEEEeccCCCcccccceeeeEEEe-eecCCCCcccceeeccCCCCccccc
Q 008975 309 --YF--G------NDRSKLVSNCLFRMGGAAILLSNRFSDRRRSKYRLVHTVRT-HKGADDNCFACVTQEEDSEGKVGVT 377 (547)
Q Consensus 309 --~~--~------~dr~~lv~~~lFGDGAAAvLLs~~~~~~~~a~~~L~~~v~t-~~~sd~~~~~~v~~~ed~~G~~g~~ 377 (547)
.. + .+++ ..+.|+|+++++|.+-....++ +=++..+++- -..+|++. ..++.+
T Consensus 249 ~~lS~~g~crpFD~~ad----G~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~~itaP---------- 312 (2582)
T TIGR02813 249 PAFTTNEDIQPFDIDSK----GMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-KSIYAP---------- 312 (2582)
T ss_pred cCcCCCCCccCCCCCCC----cccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-CCCcCC----------
Confidence 11 1 1122 4688999999999864432111 1122233222 12223221 111111
Q ss_pred cchhhHHHhhhhhhccccccCCCcccchhhHHHHHHHHHHHHHHhhhccccccccccccEEEeccCCHHHHHH-----HH
Q 008975 378 LSKNLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDE-----LE 452 (547)
Q Consensus 378 Lskdl~~v~g~~lk~ni~~lgp~vlP~se~~~~~~~~~~r~v~~~a~~~~ip~~~~did~f~~H~~gr~vl~~-----v~ 452 (547)
...| | .++++.+++. .....++|+++..|..|..+-|. +.
T Consensus 313 ------~~~g-------------------q---------~~~i~~Al~~-Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~ 357 (2582)
T TIGR02813 313 ------RPEG-------------------Q---------AKALKRAYDD-AGFAPHTCGLIEAHGTGTAAGDVAEFGGLV 357 (2582)
T ss_pred ------CHHH-------------------H---------HHHHHHHHHH-cCCCHHHCCEEEecCCCCCCCCHHHHHHHH
Confidence 0001 0 1233333322 22225799999999987666444 45
Q ss_pred HHcCCCcc---cccccccccccccccccchHHHHHHHH---HHcCCCC--------------------------------
Q 008975 453 KNLQLSDW---HMEPSRMTLYRFGNTSSSSLWYELAYS---EAKGRIK-------------------------------- 494 (547)
Q Consensus 453 k~LgL~~e---~~e~S~~tl~r~GNtsSaSi~~~La~~---~~~gri~-------------------------------- 494 (547)
+-++-... .+ +--.+=..+||+-+++=..+|... +++|.+.
T Consensus 358 ~vf~~~~~~~~~~-~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~ 436 (2582)
T TIGR02813 358 SVFSQDNDQKQHI-ALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQRE 436 (2582)
T ss_pred HHhcccccCCCCc-eeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccC
Confidence 55553221 11 001122468999988877777543 2332221
Q ss_pred CC--CEEEEEEecchhhheeEEEEEec
Q 008975 495 KG--DRTWQIAFGSGFKCNSAVWKALR 519 (547)
Q Consensus 495 ~G--DrVlliafGsG~~~~sav~r~~~ 519 (547)
.| .++..-+||-|-+..+++++--.
T Consensus 437 ~~~~r~a~vnsfGfGGtN~hvvlee~~ 463 (2582)
T TIGR02813 437 DGTPRRAGISSFGFGGTNFHMVLEEYS 463 (2582)
T ss_pred CCCccEEEEeCccCCCeeEEEEEeecC
Confidence 11 35778889998888889988754
No 117
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.46 E-value=8.2e-07 Score=96.73 Aligned_cols=93 Identities=19% Similarity=0.238 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCC--ccEEEEeccC---CCCCCChHHHHHHHcCCC------CceeEEEecCccchHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKD--IGILIVNCSL---FNPTPSLSAMVINHYKLR------GNIISYNLGGMGCSAGLISI 281 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~d--ID~LIv~~s~---~~~~Psla~~I~~~lGl~------~~~~~fdL~gmgCsggl~AL 281 (547)
++|+.+|++++|+++|++|+| ||.+|+++.. +...+..+..+...+|+. ..++++.++ .+|++|+.|+
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~Ai 127 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLAV 127 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHHH
Confidence 467799999999999999999 9999988642 112355667777666554 368899999 5999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEEccccC
Q 008975 282 DLANNLLQVHPNSYALVISMENITL 306 (547)
Q Consensus 282 ~lA~~lL~sg~~~~aLVVstE~~S~ 306 (547)
..|...+++|..+.+||++.|.+|.
T Consensus 128 ~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 128 QSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999998775
No 118
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.43 E-value=4.1e-05 Score=82.23 Aligned_cols=88 Identities=11% Similarity=0.135 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHhCC-CCC-CCccEEEEeccC-CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 213 EAVMFGAIDELFAKTS-VKP-KDIGILIVNCSL-FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kag-i~p-~dID~LIv~~s~-~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
.+|+.+|+++||+++| +++ +|||.+++++.. +.........+.+.+|+.. ...+.+ |+++..++..|...++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~v----~~sg~~a~~~A~~aV~ 100 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM-RPTMTV----AGDGLQGLAHAVMHIN 100 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC-CCeEEE----eCcHHHHHHHHHHHHH
Confidence 3677999999999999 998 799999875421 1111122345678899852 344444 7789999999999999
Q ss_pred cCCCCeEEEEEEcccc
Q 008975 290 VHPNSYALVISMENIT 305 (547)
Q Consensus 290 sg~~~~aLVVstE~~S 305 (547)
+|..++|||++.|..+
T Consensus 101 sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 101 SGLANVVVVEAHSKPS 116 (385)
T ss_pred cCCCCEEEEEEEeecc
Confidence 9999999999998643
No 119
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.43 E-value=8.5e-07 Score=96.41 Aligned_cols=91 Identities=14% Similarity=0.065 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCChHH-HHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLF-NPTPSLSA-MVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~-~~~Psla~-~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
++|+.+|+++||+++|++++|||.+++++... ...+..+. .++..+|++ +.+++.+. .+|+++..++..|...|++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~s 115 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIAS 115 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHHc
Confidence 47789999999999999999999988776432 11233343 367999998 48999999 5999999999999999999
Q ss_pred CCCCeEEEEEEcccc
Q 008975 291 HPNSYALVISMENIT 305 (547)
Q Consensus 291 g~~~~aLVVstE~~S 305 (547)
|..+.|||+++|..|
T Consensus 116 G~~~~vLv~G~e~~s 130 (430)
T PRK06365 116 GRMDCVAVYGFETMS 130 (430)
T ss_pred CCCCEEEEEEeeecc
Confidence 999999999999765
No 120
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.41 E-value=6.6e-07 Score=95.95 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAK-TSVKPKDIGILIVNCSLF-NP-TPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 212 a~~l~~~Aa~~aL~k-agi~p~dID~LIv~~s~~-~~-~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
+.+|+.+|++++|++ +|++|++||.+++++... .. .+..+..+....|+...++++.++ .+|++|+.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 457789999999997 599999999999987532 21 244666667688998779999999 59999999999999999
Q ss_pred hcCCCCeEEEEEEccccC
Q 008975 289 QVHPNSYALVISMENITL 306 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~ 306 (547)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999875
No 121
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.37 E-value=1.6e-06 Score=94.19 Aligned_cols=93 Identities=15% Similarity=0.225 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLF-NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~-~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|+.+|++++|+++|++|+|||.+++++... ...+..+..+.-..|+....+++.++ ++|++|+.++..|..++++|
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~sG 110 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIALG 110 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHCC
Confidence 46779999999999999999999999987532 11244566666666776568999999 69999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+.+||++.|.+|.
T Consensus 111 ~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 111 QIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCEEEEeeEEccCC
Confidence 999999999999885
No 122
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.23 E-value=2.8e-05 Score=79.51 Aligned_cols=116 Identities=22% Similarity=0.261 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 293 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~ 293 (547)
.|..+|++.+|+|++++++|||.++-+--....++ +++.+..|++ +-+.|.| +||....+|.+|.-++..|-.
T Consensus 53 ~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg~a 125 (329)
T PF07451_consen 53 KMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGGFA 125 (329)
T ss_dssp HHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTTS-
T ss_pred HHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCCCc
Confidence 67789999999999999999999997754333333 5778888876 5899997 999999999999999999999
Q ss_pred CeEEEEEEccccC---cccC----CCCccccccccccccceEEEEEeccCCC
Q 008975 294 SYALVISMENITL---NWYF----GNDRSKLVSNCLFRMGGAAILLSNRFSD 338 (547)
Q Consensus 294 ~~aLVVstE~~S~---~~~~----~~dr~~lv~~~lFGDGAAAvLLs~~~~~ 338 (547)
+++|+.++-.... .|.. |..|.. +...---||+|+||++....
T Consensus 126 ~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 126 DYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred ceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 9999888655431 2221 222321 12233458999999977643
No 123
>PRK07937 lipid-transfer protein; Provisional
Probab=98.20 E-value=0.00017 Score=76.61 Aligned_cols=87 Identities=16% Similarity=0.076 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCC--CChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPT--PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~--Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
+|+.+|+++||+++|++++|||.++.+++ +... ......+...+|+.+......+. ++|..++..|...+++|
T Consensus 26 el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 26 EMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhcC
Confidence 56799999999999999999998864433 2111 11123455777875444555555 35777999999999999
Q ss_pred CCCeEEEEEEcccc
Q 008975 292 PNSYALVISMENIT 305 (547)
Q Consensus 292 ~~~~aLVVstE~~S 305 (547)
..++|||++.|..+
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999653
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.09 E-value=0.00022 Score=77.05 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCcc--EEE-Eecc-C--C----C--------------------CCC-ChHHHHHHHc
Q 008975 211 EAEAVMFGAIDELFAKTSVK-PKDIG--ILI-VNCS-L--F----N--------------------PTP-SLSAMVINHY 258 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~-p~dID--~LI-v~~s-~--~----~--------------------~~P-sla~~I~~~l 258 (547)
....++..|+++|++++|++ ..+.+ .-+ +.++ . . . ..| ..+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 45689999999999999998 33342 222 2221 1 1 0 122 2466788999
Q ss_pred CCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEcc-cc--------------Cc-------ccC-CCCcc
Q 008975 259 KLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMEN-IT--------------LN-------WYF-GNDRS 315 (547)
Q Consensus 259 Gl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~-~S--------------~~-------~~~-~~dr~ 315 (547)
|+++ ..+.+.+ +|+++..||..|.++|+.|..+.+++.++|. ++ .. +.+ ..+|+
T Consensus 150 g~~G--~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~Rd 226 (412)
T COG0304 150 GLKG--PNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRD 226 (412)
T ss_pred CCCC--CcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCC
Confidence 9984 7888995 9999999999999999999999999999976 32 11 011 12344
Q ss_pred ccccccccccceEEEEEeccCC
Q 008975 316 KLVSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 316 ~lv~~~lFGDGAAAvLLs~~~~ 337 (547)
..++|.||+++||+..+.
T Consensus 227 ----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 227 ----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred ----CEEEecceeEEEecChhh
Confidence 368999999999987664
No 125
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.03 E-value=1.8e-05 Score=85.06 Aligned_cols=87 Identities=13% Similarity=0.021 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHP 292 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~ 292 (547)
.+|+.+|+++||+++|++++|||.++.++.. .+.....+++.+|++ ..+..++. .||+++..++..|...+++|.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG~ 100 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAGK 100 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcCC
Confidence 3677999999999999999999998753211 111124589999997 47888888 599999999999999999999
Q ss_pred CCeEEEEEEccc
Q 008975 293 NSYALVISMENI 304 (547)
Q Consensus 293 ~~~aLVVstE~~ 304 (547)
.+.||||+.|..
T Consensus 101 ~d~vLvvg~e~~ 112 (388)
T PRK08142 101 CSVALITLAGRP 112 (388)
T ss_pred CCEEEEEeeeec
Confidence 999999999974
No 126
>PRK07855 lipid-transfer protein; Provisional
Probab=97.90 E-value=4.6e-05 Score=81.83 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPN 293 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~ 293 (547)
+|+.+|+++||+++|++++|||.+++++.. ..+. ..+++.+|+++-....++. .||+++..++..|...+++|..
T Consensus 26 ~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG~~ 100 (386)
T PRK07855 26 RLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATGVA 100 (386)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCCCC
Confidence 567999999999999999999999875432 1222 4688999997424556888 5999999999999999999999
Q ss_pred CeEEEEEE
Q 008975 294 SYALVISM 301 (547)
Q Consensus 294 ~~aLVVst 301 (547)
+.|||+++
T Consensus 101 d~vLv~g~ 108 (386)
T PRK07855 101 DVVVCYRA 108 (386)
T ss_pred CEEEEEee
Confidence 99999987
No 127
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.76 E-value=0.00056 Score=82.18 Aligned_cols=192 Identities=13% Similarity=0.172 Sum_probs=116.2
Q ss_pred CCeEEEEEeEEcCCCCceecHHHHHHHhhhcC----CCChHhHHHHHHHHH-HhCCceEEecCC------------cccC
Q 008975 136 RPVYLVDFSCYKPEESRKCTKRIFMDQSRMTG----TFTEENLQFQKKILE-RSGLGDSTYLPE------------AVLN 198 (547)
Q Consensus 136 ~~v~Iv~~g~y~P~~~~~vt~e~~~e~~~~~~----~~~~~~~~f~~rI~~-~sGI~er~~~~~------------~~~~ 198 (547)
.+|-|+|++|.+|. .-+.++|.+.+..-. .+.++..+. ++... .-+...++|... ..+.
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~rwd~-~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFg 79 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADRWDV-DAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFG 79 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhhhhH-hhccCCccccccccccccccccCCccccCHHHcC
Confidence 45999999999999 467788888765311 122221111 00000 001111222211 1111
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEec-cCCCCCC-------------------ChHHHH
Q 008975 199 IPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIG----ILIVNC-SLFNPTP-------------------SLSAMV 254 (547)
Q Consensus 199 ~~~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID----~LIv~~-s~~~~~P-------------------sla~~I 254 (547)
++ +..+++-+-...|..+.+-++||.+|+.|+.+. .|..+. ..+|... -.+.+|
T Consensus 80 is--PrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ri 157 (1061)
T COG3321 80 IS--PREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRI 157 (1061)
T ss_pred CC--HHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHH
Confidence 11 112222233346889999999999999998877 455553 3344322 157789
Q ss_pred HHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccC--ccc--------CCCC--cc--ccccc
Q 008975 255 INHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL--NWY--------FGND--RS--KLVSN 320 (547)
Q Consensus 255 ~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~--~~~--------~~~d--r~--~lv~~ 320 (547)
...|+++ -+++.|. .+||+.+.|+++|...|+.|..+.||+-+....-. .++ ..+. +. .--..
T Consensus 158 sy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG 234 (1061)
T COG3321 158 SYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADG 234 (1061)
T ss_pred HHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCC
Confidence 9999997 4888999 69999999999999999999988888776655321 111 1111 10 00013
Q ss_pred cccccceEEEEEeccC
Q 008975 321 CLFRMGGAAILLSNRF 336 (547)
Q Consensus 321 ~lFGDGAAAvLLs~~~ 336 (547)
++.|.|+++++|-+-.
T Consensus 235 ~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 235 YVRGEGAGVVVLKRLS 250 (1061)
T ss_pred EEEeeeEEEEEEEEhH
Confidence 6889999999997644
No 128
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.70 E-value=0.00054 Score=70.21 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccC--CCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSL--FNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~--~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
++...+.+..+++++++|+.|+-+++++.. ..- -+.+.|-+-.-|++..++.--++ --||+|+.|+.....-+++|
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhcC
Confidence 556889999999999999999999998642 221 23333444555888666666666 79999999999999999999
Q ss_pred CCCeEEEEEEccccCc
Q 008975 292 PNSYALVISMENITLN 307 (547)
Q Consensus 292 ~~~~aLVVstE~~S~~ 307 (547)
.++-.|-.+.|.+|.+
T Consensus 141 ~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTN 156 (435)
T ss_pred ceeeecccchhhhccc
Confidence 9999999999998875
No 129
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.57 E-value=0.00026 Score=76.25 Aligned_cols=94 Identities=19% Similarity=0.300 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCccEEEEeccCC--CCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHH
Q 008975 213 EAVMFGAIDELFAKT--SVKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 213 ~~l~~~Aa~~aL~ka--gi~p~dID~LIv~~s~~--~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL 288 (547)
+++.....+..+++. ++++.+||.++.+|... ...+..+..++...|++.+++.+.++ .+|++|+.|+..|...+
T Consensus 28 e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~I 106 (392)
T COG0183 28 EALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQAI 106 (392)
T ss_pred HHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHHH
Confidence 444455555566543 68888899999987532 34667889999999999779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEEccccCc
Q 008975 289 QVHPNSYALVISMENITLN 307 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~~ 307 (547)
++|..+.+|+++.|.+|..
T Consensus 107 ~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 107 ASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HCCCCCEEEEEeeeeccCC
Confidence 9999999999999999873
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.39 E-value=0.00041 Score=71.35 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
|.+|+.-|++.+|+|++++|+|++-+|+++. +-+.--..+.+.+---||+-++.+.-++ +.|++|+.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 4566799999999999999999999998853 3344445566777777898889999999 8999999999999999999
Q ss_pred CCCCeEEEEEEccccC
Q 008975 291 HPNSYALVISMENITL 306 (547)
Q Consensus 291 g~~~~aLVVstE~~S~ 306 (547)
|..+-++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 131
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.87 E-value=0.00076 Score=69.42 Aligned_cols=62 Identities=24% Similarity=0.277 Sum_probs=46.8
Q ss_pred cccccccccccccccccchHHHHHHHHH--HcCCCCCCCEEEEEEecchhhheeEEEEEecccC
Q 008975 461 HMEPSRMTLYRFGNTSSSSLWYELAYSE--AKGRIKKGDRTWQIAFGSGFKCNSAVWKALRSIN 522 (547)
Q Consensus 461 ~~e~S~~tl~r~GNtsSaSi~~~La~~~--~~gri~~GDrVlliafGsG~~~~sav~r~~~~~~ 522 (547)
+++||...-.+.||+.++|++..|+-++ ..+..-.|+||.+.++|||......-.+..+...
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~ 206 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAE 206 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCcc
Confidence 6667777778899999999999999998 3445557999999999999887777776665544
No 132
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.57 E-value=0.015 Score=60.90 Aligned_cols=119 Identities=17% Similarity=0.161 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC---Cc-----cEEEEeccCC---------------------CCCC----C-hHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSVKPK---DI-----GILIVNCSLF---------------------NPTP----S-LSAMVIN 256 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~---dI-----D~LIv~~s~~---------------------~~~P----s-la~~I~~ 256 (547)
....++..|+++||+.+++-+. +. +++|-.+..+ +..| + .+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 5678999999999999998765 22 2333222110 1123 2 2678999
Q ss_pred HcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccC-----ccc----------CC--------CC
Q 008975 257 HYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL-----NWY----------FG--------ND 313 (547)
Q Consensus 257 ~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~-----~~~----------~~--------~d 313 (547)
+||++ .+.+.++ .+|+.+..+|.-|.++|+.|..+..|-=++|.+-. .|. ++ .+
T Consensus 173 ~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 99998 4788899 69999999999999999999888888777886321 000 01 12
Q ss_pred ccccccccccccceEEEEEeccC
Q 008975 314 RSKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 314 r~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
|+ .++.|.|++.++|+.-+
T Consensus 250 Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 250 RD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred CC----ceeeccceeEEehHhHH
Confidence 34 36889999999997644
No 133
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.46 E-value=0.0038 Score=62.84 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=69.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcCCCCe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVHPNSY 295 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg~~~~ 295 (547)
.+|+.++|++++++-++|+--+++-. .+... ..+-...+||. .++-||+++ .|+.|-.||-+|++++++|..+.
T Consensus 34 ~ea~tkal~da~ikys~vqqa~vgyvfgdstc---gqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesgn~dc 108 (408)
T KOG1406|consen 34 KEAITKALQDAGIKYSEVQQAVVGYVFGDSTC---GQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESGNSDC 108 (408)
T ss_pred HHHHHHHHHhcCCCHHHHHhhhheeeecCCcc---chHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcCCcce
Confidence 99999999999999999886554421 11111 23344588998 699999996 99999999999999999999999
Q ss_pred EEEEEEccccC
Q 008975 296 ALVISMENITL 306 (547)
Q Consensus 296 aLVVstE~~S~ 306 (547)
+|..+-|.+++
T Consensus 109 vlalgfekm~~ 119 (408)
T KOG1406|consen 109 VLALGFEKMER 119 (408)
T ss_pred EEeechhhhCC
Confidence 99999999876
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.06 E-value=0.038 Score=55.66 Aligned_cols=92 Identities=16% Similarity=0.092 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec----cCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNC----SLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNL 287 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~----s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~l 287 (547)
+.++..-|++.+|+.+++.++.+|.+|++. |.+- --++..|--+.|.+.+.+++.++ -=|.+|..++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 345569999999999999999999999863 3321 11234444455556678899999 6999999999999999
Q ss_pred HhcCCCCeEEEEEEccccC
Q 008975 288 LQVHPNSYALVISMENITL 306 (547)
Q Consensus 288 L~sg~~~~aLVVstE~~S~ 306 (547)
+..+..+-+|.-++|++|+
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999889999999999986
No 135
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.09 E-value=0.049 Score=45.89 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=47.6
Q ss_pred HHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEE---ecCccchHHHHHHHHHHHHHhcCCCCeEEEEE
Q 008975 224 FAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYN---LGGMGCSAGLISIDLANNLLQVHPNSYALVIS 300 (547)
Q Consensus 224 L~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fd---L~gmgCsggl~AL~lA~~lL~sg~~~~aLVVs 300 (547)
|+++|++++|||.++.... .......+.+++|++++....+ .++++|++-..+|..+..-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999998753 2334566899999986543333 44567777777776655532334678888887
Q ss_pred Ecc
Q 008975 301 MEN 303 (547)
Q Consensus 301 tE~ 303 (547)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 643
No 136
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.45 E-value=0.24 Score=52.40 Aligned_cols=71 Identities=10% Similarity=0.113 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE-----EEecCccchHHHHHHHHHHH
Q 008975 212 AEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-----YNLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 212 a~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~-----fdL~gmgCsggl~AL~lA~~ 286 (547)
....+..+++++|+++|++++|||.+++... .+.+-..+.+++|++++-.. -+++++++++-..+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3344568899999999999999999998742 23355668999999753222 26788888888888876654
No 137
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.45 E-value=0.21 Score=54.42 Aligned_cols=91 Identities=19% Similarity=0.242 Sum_probs=64.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc--------cchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM--------GCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm--------gCsggl~AL~lA~~lL 288 (547)
..|++++|+++|++++|||.+.++-. .........+.+|+.. ..+|++|- |++|....+.+...+.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999987621 2233456778888864 45677763 6777777788888887
Q ss_pred hcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEec
Q 008975 289 QVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSN 334 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~ 334 (547)
+.+ .++.|+ ..|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 444422 2356666677888775
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.29 E-value=0.37 Score=51.68 Aligned_cols=89 Identities=17% Similarity=0.216 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHc-----CCCCcee---EEEecCccchHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHY-----KLRGNII---SYNLGGMGCSAGLISID 282 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~l-----Gl~~~~~---~fdL~gmgCsggl~AL~ 282 (547)
.+.....++++++|+++|++++|||.++.... .+..-..+.++| |++++-. --++++++|++...+|.
T Consensus 269 ~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 269 NIVVYTIKPLLELVDKRNLDPDDIDYFLPHYS----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HhHHHHHHHHHHHHHHcCCChhhCCEEeeCcc----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHH
Confidence 34456688899999999999999999997642 244456777876 7864321 22667778888888887
Q ss_pred HHHHHHhcCCCCeEEEEEEcc
Q 008975 283 LANNLLQVHPNSYALVISMEN 303 (547)
Q Consensus 283 lA~~lL~sg~~~~aLVVstE~ 303 (547)
.|..-=+-.+++++++.+.|.
T Consensus 345 ~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 345 ELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHcCCCCCCCEEEEEEecc
Confidence 663311123578898888775
No 139
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.53 E-value=0.38 Score=50.35 Aligned_cols=92 Identities=12% Similarity=0.181 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEE---ecCccchHHHHHHHHH
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYN---LGGMGCSAGLISIDLA 284 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fd---L~gmgCsggl~AL~lA 284 (547)
..+++.....++.+++|+++|++++|||.+++... .+..-..+.+++|++++-...+ .+++++++-..+|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~----~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQV----GAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCC----CHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 33455566778899999999999999999887652 2345568999999975333222 5666666666666554
Q ss_pred HHHHhcCCCCeEEEEEEcc
Q 008975 285 NNLLQVHPNSYALVISMEN 303 (547)
Q Consensus 285 ~~lL~sg~~~~aLVVstE~ 303 (547)
.+-=+..+++++|+++...
T Consensus 309 ~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred HHhCCCCCCCEEEEEEech
Confidence 3210012467788777543
No 140
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.31 E-value=0.31 Score=50.78 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE---EEecCccchHHHHHHHHHH
Q 008975 209 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS---YNLGGMGCSAGLISIDLAN 285 (547)
Q Consensus 209 r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~---fdL~gmgCsggl~AL~lA~ 285 (547)
.+++.+...++++++|+++|++++|||.++.... .+.+-..+.+++|++++-.. -+.+++++++-..+|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~ 297 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 3456667788999999999999999999887532 24556778999999754332 2445556666666665442
Q ss_pred HHHhcCCCCeEEEEEE
Q 008975 286 NLLQVHPNSYALVISM 301 (547)
Q Consensus 286 ~lL~sg~~~~aLVVst 301 (547)
.-=+..+++++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 2101124577777764
No 141
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.62 E-value=0.58 Score=48.39 Aligned_cols=77 Identities=14% Similarity=0.108 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCC---ceeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 215 VMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRG---NIISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 215 l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~---~~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
...++++++|+++|++++|||.++.... ......-........++.++ ....-+++++++++++..|..+...++.
T Consensus 206 ~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~ 285 (332)
T cd00825 206 GLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEH 285 (332)
T ss_pred HHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhc
Confidence 3468999999999999999999998753 32222222333444444310 1122367778888888888888877776
Q ss_pred C
Q 008975 291 H 291 (547)
Q Consensus 291 g 291 (547)
+
T Consensus 286 ~ 286 (332)
T cd00825 286 G 286 (332)
T ss_pred C
Confidence 5
No 142
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.46 E-value=0.44 Score=49.71 Aligned_cols=84 Identities=11% Similarity=0.141 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE---EEecCccchHHHHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS---YNLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~---fdL~gmgCsggl~AL~lA~~ 286 (547)
+.+.....++++++|+++|++++|||.++..... ......++++||++++... -+.++++|++...+|+.
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~----~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQAS----GPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCC----HHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---
Confidence 3455667789999999999999999999976432 2235689999999754333 23444455555555553
Q ss_pred HHhcC---CCCeEEEEE
Q 008975 287 LLQVH---PNSYALVIS 300 (547)
Q Consensus 287 lL~sg---~~~~aLVVs 300 (547)
+++.+ +++++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 34443 456666665
No 143
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=91.00 E-value=0.2 Score=51.30 Aligned_cols=93 Identities=11% Similarity=0.119 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+++.+|...+|+++.++.+.+|.+|+++. ...-+...+..-+-.-|.+..+++--+. |+|-+.-.|+-..-.|+.+|
T Consensus 67 hdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliatg 145 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIATG 145 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEeeC
Confidence 356699999999999999999999999975 4555667777777777888778899999 99999999999999999999
Q ss_pred CCCeEEEEEEccccC
Q 008975 292 PNSYALVISMENITL 306 (547)
Q Consensus 292 ~~~~aLVVstE~~S~ 306 (547)
..+.++--+.|.+|.
T Consensus 146 ~~dvivaggvelmsd 160 (465)
T KOG1392|consen 146 NADVIVAGGVELMSD 160 (465)
T ss_pred CcCEEEEcceeeccc
Confidence 776666667888875
No 144
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=90.85 E-value=0.68 Score=47.93 Aligned_cols=84 Identities=13% Similarity=0.231 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEE---EecCccchHHHHHHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISY---NLGGMGCSAGLISIDLANNL 287 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~f---dL~gmgCsggl~AL~lA~~l 287 (547)
+......++++++|+++|++++|||.++.... .+..-..+++++|++.+-... .+++++|++-+.+|.-+.
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~-- 289 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELL-- 289 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHH--
Confidence 44455678899999999999999999997542 344567899999997532222 234556666666665443
Q ss_pred HhcC---CCCeEEEEEE
Q 008975 288 LQVH---PNSYALVISM 301 (547)
Q Consensus 288 L~sg---~~~~aLVVst 301 (547)
+.+ +++++|+++.
T Consensus 290 -~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 -RTGRIKPGDLLLLVAF 305 (318)
T ss_pred -HcCCCCCCCEEEEEEE
Confidence 333 3566666653
No 145
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.78 E-value=0.81 Score=47.45 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE---EEecCccchHHHHHHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS---YNLGGMGCSAGLISIDLANNL 287 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~---fdL~gmgCsggl~AL~lA~~l 287 (547)
++.....++++++|+++|++++|||.++... +.+.....+.+++|++.+-.. -++++++|++...+|..+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 4445567889999999999999999999774 234556789999999743222 245555666666666443
Q ss_pred HhcC---CCCeEEEEEE
Q 008975 288 LQVH---PNSYALVISM 301 (547)
Q Consensus 288 L~sg---~~~~aLVVst 301 (547)
++.+ +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4543 3566666653
No 146
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.78 E-value=0.54 Score=48.61 Aligned_cols=85 Identities=13% Similarity=0.142 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEE---EecCccchHHHHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISY---NLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~f---dL~gmgCsggl~AL~lA~~ 286 (547)
+.....+.++.+++|+++|++++|||.++.... .+..-.++.+++|++++-... +.++++|+.-+..|+.
T Consensus 215 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~--- 287 (319)
T PRK09352 215 KFAVRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDE--- 287 (319)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHH---
Confidence 344555678999999999999999999997642 344557789999997532222 3444555555555543
Q ss_pred HHhcC---CCCeEEEEEE
Q 008975 287 LLQVH---PNSYALVISM 301 (547)
Q Consensus 287 lL~sg---~~~~aLVVst 301 (547)
+++.+ +++++|+++.
T Consensus 288 ~~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 288 AVRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHHcCCCCCCCEEEEEEE
Confidence 33433 3566666664
No 147
>PRK04262 hypothetical protein; Provisional
Probab=90.20 E-value=0.6 Score=49.34 Aligned_cols=68 Identities=13% Similarity=0.207 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE--E---EecCccchHHHHHHHHHH
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS--Y---NLGGMGCSAGLISIDLAN 285 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~--f---dL~gmgCsggl~AL~lA~ 285 (547)
....++++++|+++|++++|||.+++... .+.+-..+++++|++++-.. + +.+++++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQP----NGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCC----chHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 34677899999999999999999887632 24455678999999754222 2 567677777777776554
No 148
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=89.63 E-value=0.84 Score=48.92 Aligned_cols=84 Identities=13% Similarity=0.140 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE---EEecCccchHHHHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS---YNLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~---fdL~gmgCsggl~AL~lA~~ 286 (547)
+.+....-++++++|+++|++++|||.++.... .+.+-..++++||++++-.. -+.+++++++-..+|+.+.
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~- 350 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAV- 350 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHH-
Confidence 344555667899999999999999999887643 23344668999999854322 2566667777777766553
Q ss_pred HHhcC---CCCeEEEEE
Q 008975 287 LLQVH---PNSYALVIS 300 (547)
Q Consensus 287 lL~sg---~~~~aLVVs 300 (547)
+.+ +++++|+++
T Consensus 351 --~~g~~~~Gd~vll~~ 365 (379)
T PLN02326 351 --RSGKVKKGDVIATAG 365 (379)
T ss_pred --HcCCCCCCCEEEEEE
Confidence 333 456666665
No 149
>PRK06840 hypothetical protein; Validated
Probab=89.51 E-value=1 Score=47.21 Aligned_cols=81 Identities=21% Similarity=0.281 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCcee--EEEecCccchHHHHHHHHHHHHHhcC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNII--SYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~--~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
....++++++|+++|++++|||.++.... .+..-..+.++||++++-. --+.++++|++-+.+|+.+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 34568999999999999999999875431 2344467899999974321 1145556666666666544 4443
Q ss_pred ---CCCeEEEEEE
Q 008975 292 ---PNSYALVISM 301 (547)
Q Consensus 292 ---~~~~aLVVst 301 (547)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566666653
No 150
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.49 E-value=1.2 Score=43.99 Aligned_cols=76 Identities=16% Similarity=0.067 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCChHHHHHHHcCCC---CceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNC-SLFNPTPSLSAMVINHYKLR---GNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~-s~~~~~Psla~~I~~~lGl~---~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
..++++++|+++|++++|||.++... .................+.+ .....-.+++++++++...+..+...++.+
T Consensus 147 ~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~ 226 (254)
T cd00327 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE 226 (254)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCC
Confidence 46889999999999999999988763 33222222222223333332 112223566677777777777666555554
No 151
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=89.05 E-value=1.3 Score=47.98 Aligned_cols=93 Identities=19% Similarity=0.221 Sum_probs=58.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc--------cchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM--------GCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm--------gCsggl~AL~lA~~lL 288 (547)
..|++++|+++|++|+|||.+-++- ......-...+.||+.++-..+|.+|. |++|....++++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 6899999999999999999988441 123334456678888533456777762 3445555555665554
Q ss_pred hcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEec
Q 008975 289 QVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSN 334 (547)
Q Consensus 289 ~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~ 334 (547)
+. ..++.|+ +.|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 32 2344433 2355566677777764
No 152
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=88.97 E-value=1.1 Score=46.13 Aligned_cols=85 Identities=19% Similarity=0.277 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEE---ecCccchHHHHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYN---LGGMGCSAGLISIDLANN 286 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fd---L~gmgCsggl~AL~lA~~ 286 (547)
+...+...++++++|+++|++++|||.++.... .+..-..+.+++|++++-...+ ++++++++-..+|+.+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 445667789999999999999999999887642 3444567899999974432222 3455556666555544
Q ss_pred HHhcC---CCCeEEEEEE
Q 008975 287 LLQVH---PNSYALVISM 301 (547)
Q Consensus 287 lL~sg---~~~~aLVVst 301 (547)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 5678888774
No 153
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=88.79 E-value=1.4 Score=47.71 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=45.6
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc--------cchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM--------GCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm--------gCsggl~AL~lA~~lL 288 (547)
..|++++|+++|++|+|||.+-++- ..+...-+..+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH
Confidence 5799999999999999999987541 123334456678898544456777762 3334444555665554
Q ss_pred h
Q 008975 289 Q 289 (547)
Q Consensus 289 ~ 289 (547)
.
T Consensus 376 ~ 376 (401)
T PRK09050 376 R 376 (401)
T ss_pred h
Confidence 3
No 154
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.57 E-value=1.2 Score=47.50 Aligned_cols=86 Identities=12% Similarity=0.146 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHH-cCCCC-cee----EEEecCccchHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINH-YKLRG-NII----SYNLGGMGCSAGLISIDL 283 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~-lGl~~-~~~----~fdL~gmgCsggl~AL~l 283 (547)
+++.+.+.++++++|+++|++++|||.++..... +.+-..+.++ +|+.. .-+ --+.++++|++-..+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4666778899999999999999999999987421 1222334556 56431 111 225677888888888887
Q ss_pred HHHHHhcCCCCeEEEEEE
Q 008975 284 ANNLLQVHPNSYALVISM 301 (547)
Q Consensus 284 A~~lL~sg~~~~aLVVst 301 (547)
+.+-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 75432 35567776663
No 155
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=88.20 E-value=1.3 Score=46.34 Aligned_cols=81 Identities=10% Similarity=0.165 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEE---EecCccchHHHHHHHHHHHHHhc
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISY---NLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~f---dL~gmgCsggl~AL~lA~~lL~s 290 (547)
...-++++++|+++|++++|||.++..... +.....+.+++|++++-... +.++++|++-..+|+-+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 446678899999999999999999887532 34556789999997443222 34556666666666555 343
Q ss_pred C---CCCeEEEEEE
Q 008975 291 H---PNSYALVISM 301 (547)
Q Consensus 291 g---~~~~aLVVst 301 (547)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4566766663
No 156
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=87.49 E-value=12 Score=37.45 Aligned_cols=115 Identities=13% Similarity=-0.034 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC----------------CCCC-h--------HHHHHHHcCCCCcee
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFN----------------PTPS-L--------SAMVINHYKLRGNII 265 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~----------------~~Ps-l--------a~~I~~~lGl~~~~~ 265 (547)
....|++.++.+++++. .++|.+|++|..+. ..|. + +..+.-..|.+ ..
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~--~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT--GP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC--Cc
Confidence 35577788888888653 46778888865321 2341 2 23333334443 56
Q ss_pred EEEecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEeccCC
Q 008975 266 SYNLGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNRFS 337 (547)
Q Consensus 266 ~fdL~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~~~~ 337 (547)
..-|. .|=.++-.||.-|..+|+.+ .+.+|||+.|-.....|.....+. ....--|.|++|++...
T Consensus 107 ~tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~~----~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPER----DPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhccccc----CCCcCEEEEEEecCCCC
Confidence 67777 47788999999999999999 899999999997664554321110 12233577888886553
No 157
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=86.68 E-value=3.4 Score=44.67 Aligned_cols=84 Identities=15% Similarity=0.050 Sum_probs=51.9
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCE-EEEEEecchhhh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDR-TWQIAFGSGFKC 510 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDr-VlliafGsG~~~ 510 (547)
.+|||.+=+|-.-....-...+.||+.++++.+| -.+--+||...++=...+.++..+=+=+.|++ |.-+..|.|..
T Consensus 312 ~~Did~~ei~d~fa~~~l~~~e~lg~~~~~vN~~-GG~~a~Ghp~gasG~~~~~~~~~qL~~~~g~~~v~~~c~~gg~g- 389 (397)
T PRK06954 312 AAEVDLFEINEAFAVVTMAAMKEHGLPHEKVNVN-GGACALGHPIGASGARILVTLIGALRARGGKRGVASLCIGGGEA- 389 (397)
T ss_pred HHHCCEEehhhHHHHHHHHHHHHhCCCcccCCcC-CChHHhcccHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccchh-
Confidence 5799999988876555455568899988877543 44556888888774444444333211145665 44455555554
Q ss_pred eeEEEEE
Q 008975 511 NSAVWKA 517 (547)
Q Consensus 511 ~sav~r~ 517 (547)
.+++++.
T Consensus 390 ~a~~~e~ 396 (397)
T PRK06954 390 TAMGIEL 396 (397)
T ss_pred hEEEEEe
Confidence 4566654
No 158
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=86.65 E-value=1.7 Score=47.15 Aligned_cols=69 Identities=16% Similarity=0.213 Sum_probs=46.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc--------cchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM--------GCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm--------gCsggl~AL~lA~~lL 288 (547)
..|++++|+++|++|+|||.+-++- ..+...-+..+.||+.++-..+|.+|- |++|....++++++|-
T Consensus 299 ~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr 374 (400)
T TIGR02430 299 VPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHH
Confidence 6799999999999999999987441 123344556788898544456777752 2344455566666654
Q ss_pred h
Q 008975 289 Q 289 (547)
Q Consensus 289 ~ 289 (547)
.
T Consensus 375 ~ 375 (400)
T TIGR02430 375 R 375 (400)
T ss_pred h
Confidence 3
No 159
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=86.48 E-value=2.3 Score=45.88 Aligned_cols=74 Identities=23% Similarity=0.279 Sum_probs=51.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC--------ccchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g--------mgCsggl~AL~lA~~lL 288 (547)
..|++++++++|++|+|||++=++=. .....-+-.+.||+.++ .+|.+| .||+|....+.++.+|-
T Consensus 288 ~~A~~~al~~Agl~~~DiDv~Ei~da----Fa~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~qL~ 361 (388)
T PRK06366 288 IPATRKLLEKQNKSIDYYDLVEHNEA----FSIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINALK 361 (388)
T ss_pred HHHHHHHHHHcCCCHHHcceeeccch----hHHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHHHH
Confidence 68999999999999999999887621 22334456677787643 566665 36677777777777776
Q ss_pred hcCCCCeEE
Q 008975 289 QVHPNSYAL 297 (547)
Q Consensus 289 ~sg~~~~aL 297 (547)
+.+ .++.|
T Consensus 362 ~~~-~~~g~ 369 (388)
T PRK06366 362 TRH-MKTGL 369 (388)
T ss_pred hcC-CCeEE
Confidence 543 34433
No 160
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=85.46 E-value=2.9 Score=44.83 Aligned_cols=82 Identities=16% Similarity=0.245 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCC-----CceeEE-EecCccchHHHHHHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR-----GNIISY-NLGGMGCSAGLISIDLANN 286 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~-----~~~~~f-dL~gmgCsggl~AL~lA~~ 286 (547)
-.-...|++++++|.|.+|+|.|.+++.. |.|-+....++.+|.+ +..... .++++.|.+...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 35567899999999999999999999875 4566667777777665 444444 68889999888554 444
Q ss_pred HHhcC-CCCeEEEEE
Q 008975 287 LLQVH-PNSYALVIS 300 (547)
Q Consensus 287 lL~sg-~~~~aLVVs 300 (547)
|=++. +++++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 44444 556666654
No 161
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=85.10 E-value=1.6 Score=46.35 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC-ce----eEEEecCccchHHHHHHHHHHHHHh
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG-NI----ISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~-~~----~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
..++.+++|+++|++|+|||.++.. ++..+.....+..+..-+|-.. .. ..-.++..+.++|...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999866 4332212222333444444211 11 1222444455556555555556666
Q ss_pred cC--CCCeEEEEEEc
Q 008975 290 VH--PNSYALVISME 302 (547)
Q Consensus 290 sg--~~~~aLVVstE 302 (547)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 56789988854
No 162
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=84.87 E-value=8.1 Score=41.79 Aligned_cols=81 Identities=10% Similarity=-0.053 Sum_probs=52.7
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchH---HHHHHHHHHcCCCCCCCEEEEEEecchh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSL---WYELAYSEAKGRIKKGDRTWQIAFGSGF 508 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi---~~~La~~~~~gri~~GDrVlliafGsG~ 508 (547)
++|+|.+=+|-.-....-...+.||+.++.+.+| --+--+||...++= ...|.+.++.. .|...+....|.|-
T Consensus 305 ~~Did~~Ei~d~Fa~~~l~~~e~lG~~~~pvN~~-GG~la~Ghp~gatG~r~~~~l~~~lr~~---~~~~gl~~~~~ggg 380 (390)
T PRK06504 305 IDDIDLYEVNEAFASVPLAWLKATGADPERLNVN-GGAIALGHPLGASGTKLMTTLVHALKQR---GKRYGLQTMCEGGG 380 (390)
T ss_pred HHHCCEEEecccchHHHHHHHHHhCCCCCCcCCC-CcHHhcCCCcchhHHHHHHHHHHHHHhh---CCCeEEEEEeeccc
Confidence 5899999999998777778889999998877543 33445788876665 66676666542 34444433333333
Q ss_pred hheeEEEE
Q 008975 509 KCNSAVWK 516 (547)
Q Consensus 509 ~~~sav~r 516 (547)
...+++++
T Consensus 381 ~g~a~ile 388 (390)
T PRK06504 381 MANVTIVE 388 (390)
T ss_pred ceeEEEEE
Confidence 33444544
No 163
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=84.80 E-value=3.3 Score=37.57 Aligned_cols=69 Identities=19% Similarity=0.304 Sum_probs=45.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC--------ccchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g--------mgCsggl~AL~lA~~lL 288 (547)
..|++++|+++|++++|||.+=++-. .-+..-...+.+|+.+ ..+|.+| .||+|....+.++.+|-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 68999999999999999999988731 1223345667778753 4556554 36777777788888876
Q ss_pred hcC
Q 008975 289 QVH 291 (547)
Q Consensus 289 ~sg 291 (547)
+.+
T Consensus 99 ~~~ 101 (123)
T PF02803_consen 99 RRG 101 (123)
T ss_dssp HHT
T ss_pred Hhc
Confidence 543
No 164
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=83.95 E-value=3.2 Score=44.99 Aligned_cols=92 Identities=21% Similarity=0.247 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc--------cchHHHHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM--------GCSAGLISIDLANNL 287 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm--------gCsggl~AL~lA~~l 287 (547)
...|++++|+++|++|+|||++-++- ......-...+.||+.. ..+|.+|- |++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 36899999999999999999987441 12233345567788752 23444441 445555555555555
Q ss_pred HhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEec
Q 008975 288 LQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSN 334 (547)
Q Consensus 288 L~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~ 334 (547)
-+.+ .++.| .+.|.-|-.|+|+||++
T Consensus 373 ~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGM--------------------VTMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 4322 23332 22355566677777764
No 165
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=83.51 E-value=2.3 Score=45.86 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g 271 (547)
..|++++|+++|++|+|||.+-++-. .+...-+..+.||+.. ..+|++|
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d~----f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANEA----FAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCc----cHHHHHHHHHHhCCCC--ccCCcCC
Confidence 68999999999999999999987521 2333445677888752 3445554
No 166
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=82.15 E-value=2.9 Score=44.26 Aligned_cols=88 Identities=15% Similarity=0.104 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCce------eEEEecCccchHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKT--SVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI------ISYNLGGMGCSAGLISI 281 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~ka--gi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~------~~fdL~gmgCsggl~AL 281 (547)
+.+.....++++++|+++ |++++|||.++..... +..-..+.+++|++++- .--+.+++++++-..+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 445566788899999999 9999999999987532 23445689999997432 12367777888888777
Q ss_pred HHHHHHHhcCCCCeEEEEEE
Q 008975 282 DLANNLLQVHPNSYALVISM 301 (547)
Q Consensus 282 ~lA~~lL~sg~~~~aLVVst 301 (547)
+.+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 76643211124566666653
No 167
>PLN02287 3-ketoacyl-CoA thiolase
Probab=82.04 E-value=10 Score=41.85 Aligned_cols=91 Identities=13% Similarity=0.041 Sum_probs=53.9
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCC--CE-EEEEEecchh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKG--DR-TWQIAFGSGF 508 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~G--Dr-VlliafGsG~ 508 (547)
.+|||.+=+|-.-...--...+.||+.++.+.+| -..--+||...+|=...+.++..+=+-+.| .. +..+..|.|.
T Consensus 348 ~~DID~~Ei~daFa~~~l~~~e~lG~~~~pvN~s-GG~la~GHp~gAsG~~~v~~l~~qL~~~~~~~~~gl~~~c~ggG~ 426 (452)
T PLN02287 348 LDDIDLFEINEAFASQFVYCCKKLGLDPEKVNVN-GGAIALGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGM 426 (452)
T ss_pred HHHCCEEEecchHHHHHHHHHHHcCCCccccCCC-CcHHhccCcHHHHHHHHHHHHHHHHHhcCCCCCeeEEEEccccCc
Confidence 5799999999665444444568999988777543 334457887666544444433332111223 33 3333444443
Q ss_pred hheeEEEEEecccCCc
Q 008975 509 KCNSAVWKALRSINSA 524 (547)
Q Consensus 509 ~~~sav~r~~~~~~~~ 524 (547)
-.++++++++.++.-
T Consensus 427 -g~a~~ie~~~~~~~~ 441 (452)
T PLN02287 427 -GAAAVFERGDSVDEL 441 (452)
T ss_pred -eeEEEEEecCchhhh
Confidence 367899999887643
No 168
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=82.02 E-value=4.1 Score=43.98 Aligned_cols=67 Identities=22% Similarity=0.251 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC--------ccchHHHHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNL 287 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g--------mgCsggl~AL~lA~~l 287 (547)
...|++++|+++|++|+|||.+=++- ..+...-+-.+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 36799999999999999999987763 23344456667888753 2455554 2566666667777777
Q ss_pred H
Q 008975 288 L 288 (547)
Q Consensus 288 L 288 (547)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 4
No 169
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=81.93 E-value=8.2 Score=41.97 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=36.7
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHH
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELA 485 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La 485 (547)
.+|||.|-+|-.-....-...+.||+.++++.++ -..--+||...++=...+.
T Consensus 317 ~~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~ 369 (402)
T PRK08242 317 VDDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILG 369 (402)
T ss_pred HHHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHH
Confidence 5899999999887776677889999988877542 2334466665555443333
No 170
>PRK09051 beta-ketothiolase; Provisional
Probab=81.30 E-value=3.2 Score=44.92 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=37.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g 271 (547)
..|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+|
T Consensus 295 ~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~G 343 (394)
T PRK09051 295 VPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNG 343 (394)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCc
Confidence 6899999999999999999997752 23444556778899853 4667765
No 171
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=81.22 E-value=6.2 Score=42.27 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEec--------CccchHHHHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLG--------GMGCSAGLISIDLANNL 287 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~--------gmgCsggl~AL~lA~~l 287 (547)
...|++++|+++|++|+|||.+..+- ..........+.+|+.+ ..+|.+ -.|++|......+..++
T Consensus 260 ~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql 333 (361)
T PRK06690 260 PIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQA 333 (361)
T ss_pred HHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHHH
Confidence 47899999999999999999997752 12333455667888853 344444 23667677777777776
Q ss_pred Hhc
Q 008975 288 LQV 290 (547)
Q Consensus 288 L~s 290 (547)
-+.
T Consensus 334 ~~~ 336 (361)
T PRK06690 334 KRE 336 (361)
T ss_pred HHh
Confidence 553
No 172
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=81.00 E-value=7.8 Score=42.08 Aligned_cols=85 Identities=11% Similarity=-0.027 Sum_probs=49.6
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEecchhhh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAFGSGFKC 510 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVll-iafGsG~~~ 510 (547)
.+|||.+=+|-.-....-...+.||+.++.+.+| -..--+||...++-...+.++..+=+-+.|-..+. +..|.|- -
T Consensus 320 ~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~-g 397 (406)
T PRK07851 320 IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQ-G 397 (406)
T ss_pred HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccCh-h
Confidence 5789988777655444334457889877666432 34555899888777666666555322234444443 3334443 3
Q ss_pred eeEEEEEe
Q 008975 511 NSAVWKAL 518 (547)
Q Consensus 511 ~sav~r~~ 518 (547)
.+++++.+
T Consensus 398 ~a~~~e~~ 405 (406)
T PRK07851 398 MAMVLERL 405 (406)
T ss_pred hEEEEEec
Confidence 45666643
No 173
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=79.73 E-value=17 Score=39.28 Aligned_cols=84 Identities=6% Similarity=-0.054 Sum_probs=50.3
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEE-EEEecchhhh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTW-QIAFGSGFKC 510 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVl-liafGsG~~~ 510 (547)
.+|||.+=+|-.-....-...+.||++.+.+.++ --+--+||...++=...+.++..+=+-+.|...+ -+..|.|..
T Consensus 302 ~~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~g- 379 (387)
T PRK07850 302 IGDIDLVEINEAFASVVLSWAQVHEPDMDKVNVN-GGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGALS- 379 (387)
T ss_pred HHHcCeeeecccchHHHHHHHHHcCCCCCCcCCC-CchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCce-
Confidence 5799999999987766666678999987766542 3345588888766555555444432212333333 233444433
Q ss_pred eeEEEEE
Q 008975 511 NSAVWKA 517 (547)
Q Consensus 511 ~sav~r~ 517 (547)
.++++++
T Consensus 380 ~a~~~e~ 386 (387)
T PRK07850 380 TGTIIER 386 (387)
T ss_pred eEEEEEe
Confidence 4566654
No 174
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=78.69 E-value=29 Score=37.34 Aligned_cols=57 Identities=11% Similarity=-0.123 Sum_probs=41.4
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHH
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 489 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e------------------~~e~S~~tl~r~GNtsSaSi~~~La~~~~ 489 (547)
.+|||.+-+|-.....--...+.||+.++ .+.+|=- +--+||...+|=...+.++..
T Consensus 277 ~~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 277 LDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred HHHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 58999999999988887777889999864 3322211 335899998777776666544
No 175
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=78.47 E-value=9.1 Score=41.39 Aligned_cols=54 Identities=6% Similarity=-0.151 Sum_probs=35.1
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHH
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAY 486 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~ 486 (547)
.+|||.+-+|-.-....-...+.||+.++++.++ -..--+||...++=...+.+
T Consensus 307 ~~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~ 360 (392)
T PRK07108 307 VDDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGH 360 (392)
T ss_pred HHHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHH
Confidence 5789999888665444444578899988777543 34455788776664444333
No 176
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=78.42 E-value=11 Score=40.77 Aligned_cols=84 Identities=12% Similarity=-0.003 Sum_probs=51.6
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EEecchhhh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQ-IAFGSGFKC 510 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVll-iafGsG~~~ 510 (547)
.+|||.+=+|-.-...--...+.||+.++.+.++ --.--+||...++=...+.++..+=+-+.|++.+. +..|.|. -
T Consensus 308 ~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG~-g 385 (393)
T PRK08235 308 VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGGQ-G 385 (393)
T ss_pred HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-e
Confidence 5789999888776666666788999988777543 33445788877765555554444222245566443 3344453 4
Q ss_pred eeEEEEE
Q 008975 511 NSAVWKA 517 (547)
Q Consensus 511 ~sav~r~ 517 (547)
.+++|+.
T Consensus 386 ~a~~~e~ 392 (393)
T PRK08235 386 DAVLIEV 392 (393)
T ss_pred EEEEEEe
Confidence 5566653
No 177
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=78.29 E-value=3.1 Score=43.87 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCcee
Q 008975 207 EARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNII 265 (547)
Q Consensus 207 ~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~ 265 (547)
+-.+++..++.++++++|+++|++++|||.+|..-. -...-..+++++|++++-.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQa----n~ri~~~i~~~l~~~~~k~ 270 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQA----NLRIIEAIAKKLGIPEEKV 270 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccccc----cHHHHHHHHHHcCCCHHHH
Confidence 455788999999999999999999999999986632 2344577999999975433
No 178
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=78.28 E-value=14 Score=39.97 Aligned_cols=85 Identities=11% Similarity=0.014 Sum_probs=47.8
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcc---cccccccccccccccccchHHHHHHHHHHcCCCCCCCEEE-EEEecch
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDW---HMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTW-QIAFGSG 507 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e---~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVl-liafGsG 507 (547)
.+|||.+-+|-.-....-...+.||+.++ ++.+| -..--+||...++=...+.++..+=+-+.|.+.+ .+..|.|
T Consensus 315 ~~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg 393 (404)
T PRK06205 315 LDDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGG 393 (404)
T ss_pred HHHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCC
Confidence 57999999998876666667788998763 44322 2334478887665444444333321112333433 3334444
Q ss_pred hhheeEEEEEe
Q 008975 508 FKCNSAVWKAL 518 (547)
Q Consensus 508 ~~~~sav~r~~ 518 (547)
. -.+++++++
T Consensus 394 ~-g~a~~~e~~ 403 (404)
T PRK06205 394 Q-GLAAVFERV 403 (404)
T ss_pred h-hhEEEEEec
Confidence 4 346666654
No 179
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=77.87 E-value=10 Score=41.13 Aligned_cols=81 Identities=11% Similarity=0.074 Sum_probs=44.2
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccch---HHHHHHHHHHcCCCCCCCE-EEEEEecch
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSS---LWYELAYSEAKGRIKKGDR-TWQIAFGSG 507 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaS---i~~~La~~~~~gri~~GDr-VlliafGsG 507 (547)
.+|||++=+|-.-....-...+.|+++.+++.+| -..--+||.-.++ ..+++.+.++. +.|.+ +..+..|.|
T Consensus 307 p~DID~~ei~dafa~~~l~~~~~l~~~~~~vN~s-Gg~~a~GHplgAtG~~~~~~~~~qL~~---~~~~~g~~~~c~~gG 382 (392)
T PRK06633 307 VNDLEVIEVNEAFAAQSIYVNREMKWDMEKVNIN-GGAIAIGHPIGASGGRVLITLIHGLRR---AKAKKGLVTLCIGGG 382 (392)
T ss_pred HHHcCeeehhhHHHHHHHHHHhhhCCCccccCCC-CchHhhCCcHHHHHHHHHHHHHHHHHh---cCCCeEEEEEecccC
Confidence 5789999988443222112357788776666543 4556689987777 33444444332 22333 233344444
Q ss_pred hhheeEEEEE
Q 008975 508 FKCNSAVWKA 517 (547)
Q Consensus 508 ~~~~sav~r~ 517 (547)
.. .++++++
T Consensus 383 ~g-~a~~~e~ 391 (392)
T PRK06633 383 MG-MAMCVEA 391 (392)
T ss_pred hh-heEEEEe
Confidence 33 4566664
No 180
>PLN03169 chalcone synthase family protein; Provisional
Probab=77.76 E-value=5.6 Score=42.96 Aligned_cols=88 Identities=14% Similarity=0.195 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE------EEecCccchHHHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS------YNLGGMGCSAGLISIDLA 284 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~------fdL~gmgCsggl~AL~lA 284 (547)
.+....-..++++|+++|++++|||.+.+...+. .+.+-..++++||++++-.. -+.++|++++-..+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 4555566778999999999999998443322222 24566778999999854322 267788888888888766
Q ss_pred HHH--Hh-cCCCCeEEEEE
Q 008975 285 NNL--LQ-VHPNSYALVIS 300 (547)
Q Consensus 285 ~~l--L~-sg~~~~aLVVs 300 (547)
..- ++ ..+++++|.++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 421 11 11345666555
No 181
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=77.68 E-value=3.6 Score=44.49 Aligned_cols=92 Identities=23% Similarity=0.368 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC--------ccchHHHHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNL 287 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g--------mgCsggl~AL~lA~~l 287 (547)
...|++++|+++|++|+|||.+-++- ..+...-+-.+.||+.+ ..+|.+| .|++|.-..+.++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 36899999999999999999998652 12222333445777742 2344443 2455555666666666
Q ss_pred HhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEEEec
Q 008975 288 LQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSN 334 (547)
Q Consensus 288 L~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvLLs~ 334 (547)
-+.+ .++.|+ +.|.-|..+.|+|+++
T Consensus 365 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFGIV--------------------TMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeEEE--------------------EEccccChhhEEEEEe
Confidence 5432 233332 2355566677777764
No 182
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=77.40 E-value=4.5 Score=43.01 Aligned_cols=71 Identities=14% Similarity=0.150 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE-E--E-ecCccchHHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-Y--N-LGGMGCSAGLISIDLA 284 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~-f--d-L~gmgCsggl~AL~lA 284 (547)
+.+....-.+++++|+++|++++|||.+++... .+..-..+.++||++++-.. . + .++++.++...+|+.+
T Consensus 238 ~~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~----~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 238 NMALECEPKSFKEILEFSKVDEKDIAFHLFHQS----NAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 345566677899999999999999999998752 24455789999999854322 1 2 4456666666666643
No 183
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=77.28 E-value=5.6 Score=44.45 Aligned_cols=79 Identities=18% Similarity=0.123 Sum_probs=50.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCc-eeEEEecCccch--------HHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-IISYNLGGMGCS--------AGLISIDLANNL 287 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~-~~~fdL~gmgCs--------ggl~AL~lA~~l 287 (547)
..|++++++++|++|+|||++=+..+ .|...-+-.+.||+.++ -..+|++| |.- .++.++--+...
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHHH
Confidence 46999999999999999999876532 34444566789998643 23567665 433 245554444455
Q ss_pred HhcCCCCeEEEEE
Q 008975 288 LQVHPNSYALVIS 300 (547)
Q Consensus 288 L~sg~~~~aLVVs 300 (547)
|+..+.+++||.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 5544455665543
No 184
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=76.98 E-value=7.4 Score=41.80 Aligned_cols=41 Identities=15% Similarity=0.237 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 261 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~ 261 (547)
..|++++++++|++|+|||.+-..- ..+...-+..+.||+.
T Consensus 288 ~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 288 VPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCC
Confidence 5899999999999999999887641 1122334456778875
No 185
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=76.83 E-value=7.5 Score=40.03 Aligned_cols=92 Identities=10% Similarity=0.085 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCc-ee------EEEecCccchHHHHH
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-II------SYNLGGMGCSAGLIS 280 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~-~~------~fdL~gmgCsggl~A 280 (547)
..+.+......+++++|+++|++ +|||.++...... +..-..+.+++++++. +. .-++++++|++-..+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34566788889999999999999 9999887664321 1556778899987421 11 234566677777766
Q ss_pred HHHHHHHHhcCCCCeEEEEEEcc
Q 008975 281 IDLANNLLQVHPNSYALVISMEN 303 (547)
Q Consensus 281 L~lA~~lL~sg~~~~aLVVstE~ 303 (547)
|+.+-.--+-.+++++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 66553211122467788777543
No 186
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=76.80 E-value=7.5 Score=38.70 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-ChHHHHHHHcCCCCceeEEEecC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-SLSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P-sla~~I~~~lGl~~~~~~fdL~g 271 (547)
+....+++++|.++|++++|+|.+.|++.|+..+- -.+.-+++-|.+.-+++.+.++.
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 44578899999999999999999999998865543 34444555565555677888883
No 187
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=75.40 E-value=25 Score=37.87 Aligned_cols=80 Identities=15% Similarity=0.017 Sum_probs=46.0
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCc---ccccccccccccccccccch---HHHHHHHHHHcCCCCCCCEEEEEEec
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSD---WHMEPSRMTLYRFGNTSSSS---LWYELAYSEAKGRIKKGDRTWQIAFG 505 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~---e~~e~S~~tl~r~GNtsSaS---i~~~La~~~~~gri~~GDrVlliafG 505 (547)
.+|||.+-+|-.-....-...|.||+.+ +.+.++ --+--+||...++ +..++.+.++. +.+.+.+.-..|
T Consensus 299 ~~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~GhP~GAtG~~~v~~l~~~L~~---~~~~~gl~~~~~ 374 (387)
T PRK08947 299 ISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGARISTTLLNLMER---KDAQFGLATMCI 374 (387)
T ss_pred HHHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHHHHHHHHHHHHHh---cCCCEEEEEEee
Confidence 5799999999998777777889999844 455432 2233466665544 34444444432 333343333333
Q ss_pred -chhhheeEEEE
Q 008975 506 -SGFKCNSAVWK 516 (547)
Q Consensus 506 -sG~~~~sav~r 516 (547)
.|. ..+++++
T Consensus 375 g~G~-g~a~~~e 385 (387)
T PRK08947 375 GLGQ-GIATVFE 385 (387)
T ss_pred cccc-eeEEEEE
Confidence 343 4455555
No 188
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=73.42 E-value=6.9 Score=42.01 Aligned_cols=67 Identities=16% Similarity=0.161 Sum_probs=42.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc--------cchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM--------GCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm--------gCsggl~AL~lA~~lL 288 (547)
..|+++|++++|++|+|||.+=++- ......-+..+.||+.+ ..+|.+|- |++|....++++++|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999985541 12333445667788764 35666651 3333344455555554
Q ss_pred h
Q 008975 289 Q 289 (547)
Q Consensus 289 ~ 289 (547)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 3
No 189
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=71.99 E-value=8.3 Score=41.40 Aligned_cols=74 Identities=8% Similarity=0.076 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCChHHHHHHHcCCCCc-----------eeEEEecCccchHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGN-----------IISYNLGGMGCSAG 277 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s-~~~~~Psla~~I~~~lGl~~~-----------~~~fdL~gmgCsgg 277 (547)
+...+...++.+++|+++|++++|||.+++... ......+. ..+.++++.+.+ ...=.+++++|++-
T Consensus 201 ~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~ 279 (379)
T TIGR01835 201 EQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSL 279 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHH
Confidence 345566678999999999999999999988752 11111122 234456665421 11236777777777
Q ss_pred HHHHHHH
Q 008975 278 LISIDLA 284 (547)
Q Consensus 278 l~AL~lA 284 (547)
..+|.-+
T Consensus 280 ~l~L~~~ 286 (379)
T TIGR01835 280 YLGLASL 286 (379)
T ss_pred HHHHHHH
Confidence 7777644
No 190
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=71.78 E-value=11 Score=39.84 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
...|++++|+++|++++|||.+=++.. .+...-+..+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d~----F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYDC----FTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 368999999999999999999877632 2344556667778764
No 191
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=71.18 E-value=7.3 Score=41.94 Aligned_cols=49 Identities=20% Similarity=0.270 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g 271 (547)
..|++++++++|++|+|||.+-+.-. .+...-+..+.||+. ...+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d~----fa~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINEA----FAAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcch----hHHHHHHHHHHhCCC--hhhcCCCC
Confidence 58999999999999999999854411 122233445788874 23456654
No 192
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=71.08 E-value=29 Score=37.97 Aligned_cols=85 Identities=9% Similarity=-0.058 Sum_probs=46.0
Q ss_pred cccccEEEeccCCHHHHHHHHHHcC-----------------CCcccccccccccccccccccchHHHHHHHHHHcCCCC
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQ-----------------LSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIK 494 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~Lg-----------------L~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~ 494 (547)
.+|||.+-+|-.-....-...+.|+ ++.+.+.++ --+--+||...++=...+.++..+=+-+
T Consensus 326 ~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~~~qLrg~ 404 (428)
T PRK08963 326 LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQTLHELRRR 404 (428)
T ss_pred HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHHHHhhc
Confidence 5799999999886544333344442 333344321 1233467776655555555444432224
Q ss_pred CCCEEEEEEecchhhheeEEEEE
Q 008975 495 KGDRTWQIAFGSGFKCNSAVWKA 517 (547)
Q Consensus 495 ~GDrVlliafGsG~~~~sav~r~ 517 (547)
.|++.+...-+.|-...++++++
T Consensus 405 ~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 405 GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCCEEEEEEccccChhhEEEEEe
Confidence 66776654444444455666664
No 193
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=70.70 E-value=40 Score=36.33 Aligned_cols=82 Identities=12% Similarity=-0.029 Sum_probs=47.4
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCc---ccccccccccccccccccc---hHHHHHHHHHHcCCCCCCCEEEEEEec
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSD---WHMEPSRMTLYRFGNTSSS---SLWYELAYSEAKGRIKKGDRTWQIAFG 505 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~---e~~e~S~~tl~r~GNtsSa---Si~~~La~~~~~gri~~GDrVlliafG 505 (547)
.+|||.+=+|-.-...--...+.||+-+ +.+.+|= -+--+||...+ .+..+|.+.+.+ +.+.+.+....|
T Consensus 297 p~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~G-G~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~ 372 (385)
T TIGR02445 297 ISDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCI 372 (385)
T ss_pred HHHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEec
Confidence 5799999999988777777789999843 4555432 23335555433 445555554433 233444443333
Q ss_pred chhhheeEEEEE
Q 008975 506 SGFKCNSAVWKA 517 (547)
Q Consensus 506 sG~~~~sav~r~ 517 (547)
.|-.-.++++++
T Consensus 373 g~g~g~a~~~e~ 384 (385)
T TIGR02445 373 GLGQGIATVFER 384 (385)
T ss_pred ccChhheEEEEe
Confidence 333334566664
No 194
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=69.97 E-value=16 Score=39.28 Aligned_cols=74 Identities=16% Similarity=0.096 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC---ceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG---NIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~---~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|++++|+++|++|+|||.+... +.+..-.+.-+..|.+.+|-+. ..++ .++...+++|+..+-.+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~-~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKG-LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCc-ccccChhhcchHHHHHHHHHHhcC
Confidence 579999999999999999998765 4332223444455666666321 1122 244455666666665555555554
No 195
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=69.53 E-value=1.1 Score=39.74 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=45.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC---ceeEE----EecCccchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG---NIISY----NLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~---~~~~f----dL~gmgCsggl~AL~lA~~lL 288 (547)
.++++++|+++|++|+|||.|... +......+.-+.-+.+-|+-.. .+.-- .++....++|+.++-.+--.+
T Consensus 28 ~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l 107 (119)
T PF02801_consen 28 ARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLAL 107 (119)
T ss_dssp HHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHHH
Confidence 688999999999999999999866 3332223444555666665431 12222 244456777887777777777
Q ss_pred hcC
Q 008975 289 QVH 291 (547)
Q Consensus 289 ~sg 291 (547)
+.+
T Consensus 108 ~~~ 110 (119)
T PF02801_consen 108 EHG 110 (119)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 196
>PRK05790 putative acyltransferase; Provisional
Probab=69.29 E-value=8.6 Score=41.38 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=42.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC--------ccchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g--------mgCsggl~AL~lA~~lL 288 (547)
..|++++++++|++|+|||.+-++- ......-+..+.||+.+ ..+|.+| .|++|....++++++|-
T Consensus 294 ~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~ 367 (393)
T PRK05790 294 VPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEMK 367 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHHH
Confidence 5789999999999999999997541 12233345667888742 2334443 24455555566666554
Q ss_pred h
Q 008975 289 Q 289 (547)
Q Consensus 289 ~ 289 (547)
.
T Consensus 368 ~ 368 (393)
T PRK05790 368 R 368 (393)
T ss_pred h
Confidence 4
No 197
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=68.65 E-value=23 Score=38.73 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN 240 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~ 240 (547)
...|++++++++|++|+|||++=++
T Consensus 311 ~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 311 PAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec
Confidence 3579999999999999999999877
No 198
>PRK06059 lipid-transfer protein; Provisional
Probab=67.53 E-value=83 Score=33.90 Aligned_cols=57 Identities=14% Similarity=0.010 Sum_probs=36.6
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcc------------------cccccccccccccccccchHHHHHHHHHH
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDW------------------HMEPSRMTLYRFGNTSSSSLWYELAYSEA 489 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e------------------~~e~S~~tl~r~GNtsSaSi~~~La~~~~ 489 (547)
.+|||.+-+|-.-....-...+.||+.+. .+.+| --+--+||...++=...+.++..
T Consensus 290 ~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~~e~~~ 364 (399)
T PRK06059 290 PEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPS-GGLACFGEAIPAQAIAQVCELTW 364 (399)
T ss_pred HHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCccCCccHHHHHHHHHH
Confidence 58999999999955544445589999853 33221 12344788777666666655544
No 199
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=66.11 E-value=31 Score=34.48 Aligned_cols=100 Identities=17% Similarity=0.277 Sum_probs=64.4
Q ss_pred hHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCCh
Q 008975 171 EENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSL 250 (547)
Q Consensus 171 ~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psl 250 (547)
++|...++.+.++.|+..++..-.... . +..+++.-.++++.+....+++++++- .-|+++.+|.. +-++
T Consensus 119 ~rs~~il~~lv~~~g~s~~~~~vrstd-l-~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAG---ms~l 188 (230)
T COG4126 119 ERSRPILEELVRSYGLSRHCRSVRSTD-L-PVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAG---MSDL 188 (230)
T ss_pred cccHHHHHHHHHhcCccccccceeeCC-C-CcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCcc---HHHH
Confidence 344344445666777776654311110 0 223444456778888888888888774 47899999975 3456
Q ss_pred HHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 251 SAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 251 a~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
+.+++..+|++ . +.| -..++.+|..+++.+
T Consensus 189 a~~Lq~~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 189 ADQLQKAFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 89999999965 1 333 456778888888765
No 200
>PRK09604 UGMP family protein; Validated
Probab=65.62 E-value=25 Score=37.11 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----ChHHHHHHHcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKL 260 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P-----sla~~I~~~lGl 260 (547)
.+.....++++|+++|++++|||.+.+++.|...+. +.|.-+...++.
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 345578899999999999999999999998754333 234445555554
No 201
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=64.78 E-value=9.5 Score=40.69 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC-ce----eEEEecCccchHHHHHHHHHHHHHh
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG-NI----ISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~-~~----~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
..++++++|+++|++++|||.+... +++..-.+.-+.-+..-++-++ .+ ..-.++...+++|+.++-.+...|+
T Consensus 277 ~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~ 356 (406)
T cd00834 277 AARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALR 356 (406)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHh
Confidence 3678999999999999999999876 4433333444445666665421 11 1123344567778878877777777
Q ss_pred cC
Q 008975 290 VH 291 (547)
Q Consensus 290 sg 291 (547)
.+
T Consensus 357 ~~ 358 (406)
T cd00834 357 DG 358 (406)
T ss_pred cC
Confidence 66
No 202
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=62.99 E-value=8.9 Score=39.26 Aligned_cols=58 Identities=19% Similarity=0.172 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----ChHHHHHHHcCCCCceeEEEec
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLG 270 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P-----sla~~I~~~lGl~~~~~~fdL~ 270 (547)
.|++.+.+ ...++++|+++|++++|||.+.++..|+..+. +.|-.++..++ ++.+.++
T Consensus 26 ~r~H~~~L-~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~----~Pli~v~ 88 (268)
T PF00814_consen 26 SRQHSENL-PPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALN----IPLIGVS 88 (268)
T ss_dssp HHHHHHHH-HHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT------EEEEE
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhC----CCeEeec
Confidence 45555555 68899999999999999999999998865443 22333444443 4555666
No 203
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=62.44 E-value=14 Score=39.96 Aligned_cols=66 Identities=18% Similarity=0.213 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecC--------ccchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGG--------MGCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~g--------mgCsggl~AL~lA~~lL 288 (547)
..+++++++++|++|+|||.+=++-. .+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d~----f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINEA----FSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCcH----HHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999887521 1223344566777642 2334443 24555555555665553
No 204
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=61.80 E-value=43 Score=36.37 Aligned_cols=81 Identities=14% Similarity=-0.009 Sum_probs=43.5
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCc--ccccccccccccccccccchHH---HHHHHHHHcCCCCCCCE-EEEEEec
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSD--WHMEPSRMTLYRFGNTSSSSLW---YELAYSEAKGRIKKGDR-TWQIAFG 505 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~--e~~e~S~~tl~r~GNtsSaSi~---~~La~~~~~gri~~GDr-VlliafG 505 (547)
.+|||.+=+|-.-....-...|.||+.. +.+.+| --+--+||...++=. +++.+.++ |+ .|.+ +.-+..|
T Consensus 313 ~~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el~~qL~-~~--~~~~~~~~~~~g 388 (401)
T PRK08131 313 LDDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTAARELQ-RR--GKRYAVVSLCIG 388 (401)
T ss_pred HHHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHHHHHHH-hc--CCCceEEEEEec
Confidence 5789999998876555445678899853 344322 122347888655544 44444333 22 2222 3333334
Q ss_pred chhhheeEEEEE
Q 008975 506 SGFKCNSAVWKA 517 (547)
Q Consensus 506 sG~~~~sav~r~ 517 (547)
.|.. .+++++.
T Consensus 389 gg~g-~a~i~e~ 399 (401)
T PRK08131 389 VGQG-LAMVIER 399 (401)
T ss_pred CChh-hEEEEEe
Confidence 4433 4566664
No 205
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.62 E-value=12 Score=40.39 Aligned_cols=75 Identities=11% Similarity=0.105 Sum_probs=44.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC-ceeE----EEecCccchHHHHHHHHHHHHHhc
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG-NIIS----YNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~-~~~~----fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
..|++++|+++|++|+|||.+-.. +.+..-.+.-..-+..-+|-+. ++.. -.++...+++|+..+-.+...|+.
T Consensus 279 ~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~ 358 (411)
T PRK07314 279 ARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRD 358 (411)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999755 4432333433445666666321 1211 123333445555555555555555
Q ss_pred C
Q 008975 291 H 291 (547)
Q Consensus 291 g 291 (547)
+
T Consensus 359 ~ 359 (411)
T PRK07314 359 Q 359 (411)
T ss_pred C
Confidence 4
No 206
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=61.37 E-value=13 Score=36.20 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP 248 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P 248 (547)
.+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 344577999999999999999999999998865554
No 207
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=60.76 E-value=24 Score=37.48 Aligned_cols=90 Identities=20% Similarity=0.144 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCCh--HHHHHHHcCCCCceeEEEecCccchHHHHHHHHHH
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSL--SAMVINHYKLRGNIISYNLGGMGCSAGLISIDLAN 285 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psl--a~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~ 285 (547)
+|.+.+.+ ....+++|+++|++.+|||++-++..|+- .+++ ....++.|-+.-+.+-+-++ -|-|=+.+-.+..
T Consensus 47 sr~H~e~i-~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~ 122 (342)
T COG0533 47 SRHHVENI-PPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLET 122 (342)
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhcc
Confidence 55555554 67889999999999999999999887753 2322 22333333333345577777 4555444433322
Q ss_pred HHHhcCCCCeEEEEEEccc
Q 008975 286 NLLQVHPNSYALVISMENI 304 (547)
Q Consensus 286 ~lL~sg~~~~aLVVstE~~ 304 (547)
+. ...--+|+||+-..
T Consensus 123 ~~---~~p~v~LlVSGGHT 138 (342)
T COG0533 123 GL---AFPPVALLVSGGHT 138 (342)
T ss_pred CC---CCCcEEEEEecCce
Confidence 21 12345777776663
No 208
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=60.72 E-value=23 Score=37.99 Aligned_cols=40 Identities=18% Similarity=0.341 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR 261 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~ 261 (547)
..|++++++++|++|+|||.+-.. +.+ ...-+..+.+|+.
T Consensus 261 ~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 261 VVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 578999999999999999998766 322 2345566777774
No 209
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=60.39 E-value=20 Score=38.82 Aligned_cols=69 Identities=16% Similarity=0.155 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCc----------------eeEEEecC--------c
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN----------------IISYNLGG--------M 272 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~----------------~~~fdL~g--------m 272 (547)
..|+++||+++|++|+|||++=++-. .+...-+..+.||+.+. -..+|.+| .
T Consensus 272 ~~A~~~al~~Agi~~~DID~~Ei~d~----Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~ 347 (393)
T cd00826 272 IEAARKALEKAGLGIGDLDLIEAHDA----FAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPI 347 (393)
T ss_pred HHHHHHHHHHcCCCHHHcCeeehhhh----hHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCc
Confidence 68999999999999999998877621 22333445566666431 13455554 2
Q ss_pred cchHHHHHHHHHHHHHh
Q 008975 273 GCSAGLISIDLANNLLQ 289 (547)
Q Consensus 273 gCsggl~AL~lA~~lL~ 289 (547)
||+|....++++.+|-.
T Consensus 348 gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 348 GASGAAICAELCFELKG 364 (393)
T ss_pred cccHHHHHHHHHHHHhh
Confidence 56666677777777754
No 210
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=59.52 E-value=14 Score=39.63 Aligned_cols=76 Identities=16% Similarity=0.073 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCC-CceeE----EEecCccchHHHHHHHHHHHHHh
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-GNIIS----YNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~-~~~~~----fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
..+|++++|+++|++|+|||.+... +++..-.+.-+..+.+-+|-. +..+. -.++....+++...+-.+...|+
T Consensus 276 ~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~ 355 (407)
T cd00828 276 IARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLE 355 (407)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHh
Confidence 4789999999999999999998865 444333344444455555432 11221 22344455555555555555555
Q ss_pred cC
Q 008975 290 VH 291 (547)
Q Consensus 290 sg 291 (547)
.+
T Consensus 356 ~~ 357 (407)
T cd00828 356 HG 357 (407)
T ss_pred cC
Confidence 43
No 211
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=59.45 E-value=16 Score=39.12 Aligned_cols=45 Identities=9% Similarity=0.099 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 260 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl 260 (547)
..+|++++|+++|++|+|||.+... +.+..-.+.-...+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 3689999999999999999998765 44433344445556676664
No 212
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=59.25 E-value=32 Score=31.20 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=48.3
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEE-EEEecchhhh
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTW-QIAFGSGFKC 510 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVl-liafGsG~~~ 510 (547)
.+|+|.|=+|-.-....-...+.||++++++.++=-.+ -+||-..+|=...+.++..+=+-+.|++.+ .+.-|.|..
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~l-a~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~g- 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGAL-ALGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQG- 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HH-HH-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTEE-
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCcccccc-cccccccccccchhhhhHHHHHHhchhhhhHHhcccceee-
Confidence 58999999999998888889999999999986532223 277775555433333332211113456644 344444443
Q ss_pred eeEEEE
Q 008975 511 NSAVWK 516 (547)
Q Consensus 511 ~sav~r 516 (547)
.++++|
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455554
No 213
>PRK14878 UGMP family protein; Provisional
Probab=58.94 E-value=16 Score=38.43 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----ChHHHHHHHcCC
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKL 260 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P-----sla~~I~~~lGl 260 (547)
+|...+.+. .+++++|+++|++++|||.+.++..|...+. +.|..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 455665555 9999999999999999999999988764332 123445555554
No 214
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=58.50 E-value=23 Score=38.45 Aligned_cols=76 Identities=11% Similarity=0.057 Sum_probs=45.7
Q ss_pred HHHHHHHHHHh-CCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC--ceeEE----EecCccchHHHHHHHHHHHH
Q 008975 216 MFGAIDELFAK-TSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG--NIISY----NLGGMGCSAGLISIDLANNL 287 (547)
Q Consensus 216 ~~~Aa~~aL~k-agi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~--~~~~f----dL~gmgCsggl~AL~lA~~l 287 (547)
..+|++++|++ +|++|+|||.+-.+ |.+..-.+.-...+.+-+|-+. .+..- .++....++|+..+-.+...
T Consensus 285 ~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~ 364 (421)
T PTZ00050 285 ARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILS 364 (421)
T ss_pred HHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHH
Confidence 46899999999 99999999999866 4432222333345677776431 11111 33434455555555555555
Q ss_pred HhcC
Q 008975 288 LQVH 291 (547)
Q Consensus 288 L~sg 291 (547)
|+.+
T Consensus 365 l~~~ 368 (421)
T PTZ00050 365 LYEQ 368 (421)
T ss_pred HHcC
Confidence 6554
No 215
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=58.42 E-value=26 Score=38.10 Aligned_cols=74 Identities=11% Similarity=-0.028 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC-ceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG-NIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~-~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
+.+|.+++|+++|+ |+|||.|... |++..-...-+..|.+.++.+- .+++ .++....++|...+-.+.-.|+.+
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks-~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGT-LFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccch-hhccchHHHHHHHHHHHHHHHhcC
Confidence 46899999999999 8999998865 4443333444556777777431 2333 234334444544444444444444
No 216
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=58.42 E-value=30 Score=36.08 Aligned_cols=34 Identities=6% Similarity=0.026 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPT 247 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~ 247 (547)
+.....++++|+++|++++|||.+.++..|...+
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~t 83 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPGLGG 83 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchh
Confidence 4447889999999999999999999999886443
No 217
>PRK08256 lipid-transfer protein; Provisional
Probab=57.07 E-value=27 Score=37.62 Aligned_cols=42 Identities=12% Similarity=0.233 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|++++++++|++++|||.+-+.-. .+...-+..+.||+.+
T Consensus 267 ~~a~~~a~~~ag~~~~DiD~~ei~d~----f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDIDVVELHDC----FSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHcCCCHHHCCEEeeccC----CcHHHHHHHHHcCCCC
Confidence 57999999999999999999877621 2333445556777764
No 218
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=55.70 E-value=39 Score=34.14 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCC-hHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHhcC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPS-LSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Ps-la~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~sg 291 (547)
......-++++|++++++++|||.+-+.-.|..-.|= ..+.++.-+-+=-+.+-..++ -|-|-+ ...+- +...
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR~-iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGRE-ITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcce-eccC
Confidence 4555677889999999999999999888777665663 233444444332244555555 565533 33332 2222
Q ss_pred CCCeEEEEEEccc
Q 008975 292 PNSYALVISMENI 304 (547)
Q Consensus 292 ~~~~aLVVstE~~ 304 (547)
.+-.+|-||+-+.
T Consensus 124 ~nPvvLYvSGGNT 136 (336)
T KOG2708|consen 124 QNPVVLYVSGGNT 136 (336)
T ss_pred CCCEEEEEeCCce
Confidence 4667888888774
No 219
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=55.40 E-value=77 Score=34.79 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=14.9
Q ss_pred cccccccceEEEEEeccC
Q 008975 319 SNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 319 ~~~lFGDGAAAvLLs~~~ 336 (547)
..|...|||+|+||...+
T Consensus 265 ~~~~~~DGAaA~il~se~ 282 (430)
T TIGR02446 265 NSTPLTDGAAAVILMREG 282 (430)
T ss_pred hcCCCCCceEEEEEecHH
Confidence 357889999999998754
No 220
>PRK07855 lipid-transfer protein; Provisional
Probab=55.03 E-value=32 Score=37.07 Aligned_cols=24 Identities=25% Similarity=0.332 Sum_probs=21.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN 240 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~ 240 (547)
..|+++|++++|++|+|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998765
No 221
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=54.80 E-value=26 Score=37.23 Aligned_cols=45 Identities=9% Similarity=0.083 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 260 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl 260 (547)
...|++++|+++|++|+|||.+-.. |++..-.+.-+.-|.+-||-
T Consensus 208 ~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 208 AYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 4789999999999999999987754 54433345556677777774
No 222
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=53.74 E-value=30 Score=38.09 Aligned_cols=42 Identities=14% Similarity=0.176 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|++++++++|++|+|||++=++-. .+...-+..+.||+.+
T Consensus 312 ~~A~~~a~~~AGl~~~DiD~~Ei~da----Fa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 312 RAAAQKALSMAGVKPSDLQVAEVHDC----FTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHcCCCHHHCcEeeeccc----ChHHHHHHHHHcCCCC
Confidence 68999999999999999999987621 2333455667777754
No 223
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=53.59 E-value=26 Score=39.69 Aligned_cols=75 Identities=11% Similarity=0.112 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCCceeEE----EecCccchHHHHHHHHHHHHHhcC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISY----NLGGMGCSAGLISIDLANNLLQVH 291 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~~~~~f----dL~gmgCsggl~AL~lA~~lL~sg 291 (547)
.+|.+++|+++|++|+|||.+-.. |++..-.+.-...|.+-||-.+.++.- .++...+++|...+..+-..|+.+
T Consensus 408 ~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g 487 (540)
T PLN02787 408 ILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTG 487 (540)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcC
Confidence 689999999999999999998754 443322333455677777643222211 234334455554555555555554
No 224
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=52.85 E-value=22 Score=38.37 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCCceeEE----EecCccchHHHHHHHHHHHHHhc
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISY----NLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~~~~~f----dL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|.+++|+++|++|+|||.+... |++..-.+.-+..|.+-||-. +.+.- .++...+++|+..+-.+...|+.
T Consensus 272 ~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~ 350 (399)
T cd00832 272 LARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRD 350 (399)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhC
Confidence 4688999999999999999988755 444333455556677777743 22211 23444556666666555555665
Q ss_pred C
Q 008975 291 H 291 (547)
Q Consensus 291 g 291 (547)
+
T Consensus 351 ~ 351 (399)
T cd00832 351 G 351 (399)
T ss_pred C
Confidence 4
No 225
>PRK06158 thiolase; Provisional
Probab=52.56 E-value=36 Score=36.58 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=29.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR 261 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~ 261 (547)
..|++++++++|++|+|||.+=+.-. .+...-+..+.||+.
T Consensus 257 ~~aa~~A~~~AGi~p~DId~~ElyD~----Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 257 AESGPRAFAMAGLTPADIDVVELYDA----FTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEecCC----chHHHHHHHHHcCCC
Confidence 57999999999999999999876521 222334445666664
No 226
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.33 E-value=21 Score=38.48 Aligned_cols=74 Identities=12% Similarity=0.194 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCCceeEE----EecCccchHHHHHHHHHHHHHhc
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRGNIISY----NLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~~~~~f----dL~gmgCsggl~AL~lA~~lL~s 290 (547)
..+|++++|+++|++|+|||.+-.. +++..-.+.-...|.+-+|= ++... .++....++|+..+-.+...|+.
T Consensus 256 ~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~ 333 (381)
T PRK05952 256 AIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLALRH 333 (381)
T ss_pred HHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999998865 44332233334456666652 22211 23333445555555555555554
Q ss_pred C
Q 008975 291 H 291 (547)
Q Consensus 291 g 291 (547)
+
T Consensus 334 ~ 334 (381)
T PRK05952 334 Q 334 (381)
T ss_pred C
Confidence 4
No 227
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.10 E-value=28 Score=37.92 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCC-CceeEE----EecCccchHHHHHHHHHHHHHh
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR-GNIISY----NLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~-~~~~~f----dL~gmgCsggl~AL~lA~~lL~ 289 (547)
..+|++++|+++|++|+|||.+... +++....+.-..-|.+.+|-+ ++++.- .++....++|+..+-.+...|+
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~ 370 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQ 370 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHh
Confidence 4688999999999999999999876 443322333344455566532 122221 2233334455555555545555
Q ss_pred cC
Q 008975 290 VH 291 (547)
Q Consensus 290 sg 291 (547)
.+
T Consensus 371 ~~ 372 (425)
T PRK06501 371 TG 372 (425)
T ss_pred cC
Confidence 54
No 228
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=52.08 E-value=40 Score=36.47 Aligned_cols=44 Identities=11% Similarity=0.040 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 259 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lG 259 (547)
..+|++++|+++|++|+|||.+-.. |.+..-.+.-...+...||
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3789999999999999999998755 4433223344556777776
No 229
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=50.81 E-value=39 Score=36.31 Aligned_cols=45 Identities=13% Similarity=0.152 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 260 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl 260 (547)
...|++++|+++|++|+|||.+... +++..-...-...+..-||.
T Consensus 281 ~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 281 QARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 3678999999999999999999876 44321122233456666654
No 230
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=50.12 E-value=23 Score=37.15 Aligned_cols=37 Identities=22% Similarity=0.129 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFN 245 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~ 245 (547)
+|++++.+.. +++++|+++|++++|||.+.++..|..
T Consensus 42 ~~~H~~~l~~-~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAPK-LIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 4555665544 499999999999999999999987653
No 231
>PRK07937 lipid-transfer protein; Provisional
Probab=49.75 E-value=45 Score=35.58 Aligned_cols=77 Identities=10% Similarity=-0.024 Sum_probs=45.6
Q ss_pred HHHHHHHHHh-CCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCc-------cchHHHHHHHHHHHHH
Q 008975 217 FGAIDELFAK-TSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGM-------GCSAGLISIDLANNLL 288 (547)
Q Consensus 217 ~~Aa~~aL~k-agi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gm-------gCsggl~AL~lA~~lL 288 (547)
..++++++++ +|++|+|||++=+.- ..+...-+..+.||+.++ ..+|.+|- ||+|...-++++.+|.
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 3444555555 599999999997662 134445567788998632 35666652 4444444455555554
Q ss_pred hcCCCCeEEEE
Q 008975 289 QVHPNSYALVI 299 (547)
Q Consensus 289 ~sg~~~~aLVV 299 (547)
.. ..+++|+.
T Consensus 324 g~-~a~~~l~~ 333 (352)
T PRK07937 324 DG-SARRALAH 333 (352)
T ss_pred cc-CCCEEEEe
Confidence 33 34555554
No 232
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=49.36 E-value=53 Score=34.44 Aligned_cols=54 Identities=13% Similarity=0.053 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----ChHHHHHHHcCCCCceeEEEecC
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P-----sla~~I~~~lGl~~~~~~fdL~g 271 (547)
+.....++++|+++|++++|||.+.++..|...+. +.|.-++..++ ++.+.++.
T Consensus 51 ~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 51 EAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 44578899999999999999999999998865433 23333444444 44555554
No 233
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=48.89 E-value=63 Score=34.90 Aligned_cols=42 Identities=19% Similarity=0.209 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|+++|++++|++|+|||++-+.- ..+...-+..+.||+.+
T Consensus 279 ~~aa~~a~~~Agi~~~Didv~el~D----~fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 279 RQAVLDAYRRAGVGLDDLDGFEVHD----CFTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHcCCCHHHCeEEeeec----cchHHHHHHHHHcCCCC
Confidence 5799999999999999999988762 12334456667778753
No 234
>PLN03170 chalcone synthase; Provisional
Probab=48.74 E-value=34 Score=37.17 Aligned_cols=72 Identities=13% Similarity=0.138 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE------EEecCccchHHHHHHHH
Q 008975 210 KEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS------YNLGGMGCSAGLISIDL 283 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~------fdL~gmgCsggl~AL~l 283 (547)
+-+.+.....++++|+++|++++|||..++.-. -+.+-..+.++||+.++-.. -+.+||+.++-+.+|+-
T Consensus 277 ~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~ 352 (401)
T PLN03170 277 GLISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDE 352 (401)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHH
Confidence 345666777889999999999999998776532 24455678899999754321 24555666666666666
Q ss_pred HH
Q 008975 284 AN 285 (547)
Q Consensus 284 A~ 285 (547)
+.
T Consensus 353 ~~ 354 (401)
T PLN03170 353 MR 354 (401)
T ss_pred HH
Confidence 53
No 235
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=47.93 E-value=16 Score=36.05 Aligned_cols=36 Identities=28% Similarity=0.298 Sum_probs=25.5
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhhe
Q 008975 476 SSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCN 511 (547)
Q Consensus 476 sSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~ 511 (547)
.+.|.|...+.+++.=.+++||+|+=+|-|+||...
T Consensus 53 ~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aA 88 (209)
T PF01135_consen 53 QTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAA 88 (209)
T ss_dssp EEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHH
T ss_pred eechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHH
Confidence 566677777887777679999999999999998754
No 236
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.66 E-value=32 Score=37.40 Aligned_cols=76 Identities=12% Similarity=0.000 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCC--CceeEE----EecCccchHHHHHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLR--GNIISY----NLGGMGCSAGLISIDLANNLL 288 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~--~~~~~f----dL~gmgCsggl~AL~lA~~lL 288 (547)
...|++++|+++|++|+|||.+-.. |.+..-.+.-+.-|.+-||-. ..++.- .++....++|+..+-.+.-.|
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l 359 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSL 359 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHH
Confidence 3678999999999999999998755 544333455556677777632 112222 223333445555554444555
Q ss_pred hcC
Q 008975 289 QVH 291 (547)
Q Consensus 289 ~sg 291 (547)
+.+
T Consensus 360 ~~~ 362 (414)
T PRK08722 360 VDQ 362 (414)
T ss_pred hcC
Confidence 554
No 237
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=47.45 E-value=45 Score=35.66 Aligned_cols=48 Identities=15% Similarity=0.149 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----ChHHHHHHHcCC
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP-----SLSAMVINHYKL 260 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P-----sla~~I~~~lGl 260 (547)
.+-.-++.+++|+++|.+|+|+|++-|...|+.+.+ +.|-.++.++..
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~k 135 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQK 135 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccC
Confidence 445578899999999999999999999887765443 344455555544
No 238
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=46.89 E-value=43 Score=35.89 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=30.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|++++++++|++|+|||.+-+.-. .+...-+..+.||+.+
T Consensus 260 ~~a~~~al~~Agi~~~DiD~~ei~d~----ft~~~l~~le~lGl~~ 301 (385)
T PRK12578 260 QLAARQAYNMAKVTPNDIEVATVHDA----FTIAEIMGYEDLGFTE 301 (385)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCc----ChHHHHHHHHHcCCCC
Confidence 57999999999999999999766521 2234455667777753
No 239
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=46.44 E-value=72 Score=34.97 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=29.2
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVK--PKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~--p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|+++|++++|++ ++|||++=+. |- +...-+..+.||+.+
T Consensus 296 ~~a~~~a~~~AGl~~~~~DiD~~Ei~D~F-----a~~~l~~lE~lGl~~ 339 (430)
T PRK06365 296 RMAAKEAYEMAGITDPLNDLDLIELHDAY-----TSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHcCCCCCHHHCCEEEeecCC-----cHHHHHHHHHcCCCC
Confidence 57999999999997 7999999876 32 222334456666643
No 240
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=46.29 E-value=30 Score=38.77 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFN 245 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~ 245 (547)
.|.+.+.+. .+++++|+++|++++|||.+.++..|..
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~ 81 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL 81 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc
Confidence 466666665 9999999999999999999999988764
No 241
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=45.98 E-value=73 Score=34.29 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCChHHHHHHHcCCC
Q 008975 216 MFGAIDELFAKTSVK--PKDIGILIVNCSLFNPTPSLSAMVINHYKLR 261 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~--p~dID~LIv~~s~~~~~Psla~~I~~~lGl~ 261 (547)
...|++++++++|++ ++|||++=+.-+ .+...-+..+.||+.
T Consensus 257 ~~~a~~~a~~~Agi~~p~~Did~~el~d~----F~~~~~~~~e~lGl~ 300 (386)
T PRK08313 257 GRDAAAALWKAAGITDPRDEIDVAEIYVP----FSWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHcCCCCChhhCCEEEeccC----ChHHHHHHHHHcCCC
Confidence 357999999999997 699998866521 223334455666664
No 242
>PLN03173 chalcone synthase; Provisional
Probab=45.93 E-value=43 Score=36.29 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE-----E-EecCccchHHHHHHH
Q 008975 209 RKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-----Y-NLGGMGCSAGLISID 282 (547)
Q Consensus 209 r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~-----f-dL~gmgCsggl~AL~ 282 (547)
.+.+....-..++++|+++|++++|||..++.-. -+..-..++++||+.++-.. + +.+||+-++-..+|+
T Consensus 272 p~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hqg----g~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~ 347 (391)
T PLN03173 272 PGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG----GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILD 347 (391)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccCeEEECCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHH
Confidence 3446667778889999999999999999776532 24556779999999754322 2 234444444445555
Q ss_pred HHH
Q 008975 283 LAN 285 (547)
Q Consensus 283 lA~ 285 (547)
-+.
T Consensus 348 ~~~ 350 (391)
T PLN03173 348 EMR 350 (391)
T ss_pred HHH
Confidence 443
No 243
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=44.99 E-value=42 Score=35.85 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCCCC----ceeE----EEecCccchHHHHHHHHHH
Q 008975 215 VMFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKLRG----NIIS----YNLGGMGCSAGLISIDLAN 285 (547)
Q Consensus 215 l~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl~~----~~~~----fdL~gmgCsggl~AL~lA~ 285 (547)
-..+|++++|+++|++|+|||.+... +++..-.+.-...|..-|+-+. .+.. -.++....++++..+-.+.
T Consensus 280 ~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 280 AQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred HHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHH
Confidence 34689999999999999999999876 4332222222334555544321 1111 1234444555666666666
Q ss_pred HHHhcC
Q 008975 286 NLLQVH 291 (547)
Q Consensus 286 ~lL~sg 291 (547)
..++.+
T Consensus 360 ~~l~~~ 365 (421)
T cd00833 360 LALEHG 365 (421)
T ss_pred HHHhcC
Confidence 566654
No 244
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=44.68 E-value=31 Score=37.45 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=33.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 259 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lG 259 (547)
.++++++|+++|++|+|||.+... |++..-.+.-+..|.+-||
T Consensus 278 ~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 278 QIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 688999999999999999999755 5543334555667788887
No 245
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=44.33 E-value=47 Score=35.03 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCc-------eeEEEecCccchHHHHHHHHHHHHHhc
Q 008975 218 GAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-------IISYNLGGMGCSAGLISIDLANNLLQV 290 (547)
Q Consensus 218 ~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~-------~~~fdL~gmgCsggl~AL~lA~~lL~s 290 (547)
-|+..+|+++|+..+|||+.=.|-- .-|-+.+-.++||+.++ +.++.-- .||+|.=.-.-+-+.|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINEA----FAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINEA----FASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhHH----HHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 4788899999999999998876631 22334566788888642 2333333 4777665444444444444
Q ss_pred C
Q 008975 291 H 291 (547)
Q Consensus 291 g 291 (547)
+
T Consensus 399 g 399 (435)
T KOG1389|consen 399 G 399 (435)
T ss_pred c
Confidence 3
No 246
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=42.28 E-value=43 Score=36.51 Aligned_cols=45 Identities=11% Similarity=-0.015 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcCC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL 260 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lGl 260 (547)
..++.+++|+++|++|+|||.+-.. |++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 4688999999999999999999754 54433345556677777874
No 247
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=41.76 E-value=84 Score=34.00 Aligned_cols=42 Identities=14% Similarity=0.076 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVK--PKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~--p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|++++++++|++ ++|||.+-++= ......-+..+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 36999999999997 69999998771 12223345556666643
No 248
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=41.62 E-value=72 Score=28.81 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCChHHHHHHHc-CCCCceeEEEecCcc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIISYNLGGMG 273 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~--~~~Psla~~I~~~l-Gl~~~~~~fdL~gmg 273 (547)
.+-..+-.++.+++.+++++||--++++.++| ...|+ ..+.++ |+. +++-++...|.
T Consensus 19 ~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qEm~ 78 (117)
T TIGR01796 19 GEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQEIP 78 (117)
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCcCC
Confidence 33334455677788999999999999997764 44663 444566 887 77777766543
No 249
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=41.35 E-value=42 Score=36.75 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 259 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lG 259 (547)
+.+|.+.||+++|++|+|||.+-.. |++..-...-+.-|..-+|
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 3699999999999999999999855 6654444555556666666
No 250
>PLN03172 chalcone synthase family protein; Provisional
Probab=40.89 E-value=50 Score=35.79 Aligned_cols=70 Identities=16% Similarity=0.168 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE-----E-EecCccchHHHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS-----Y-NLGGMGCSAGLISIDLA 284 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~-----f-dL~gmgCsggl~AL~lA 284 (547)
.+.....+.++++|+++|++..|||..++.-. -+..-..|+++||++++-.. + +.+||+.++-+.+|+.+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqg----g~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHPG----GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecCC----cHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 45566667788999999999999999776532 24556779999999854332 1 34556666666666654
No 251
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=40.40 E-value=1.6e+02 Score=32.26 Aligned_cols=17 Identities=18% Similarity=0.208 Sum_probs=14.6
Q ss_pred ccccccceEEEEEeccC
Q 008975 320 NCLFRMGGAAILLSNRF 336 (547)
Q Consensus 320 ~~lFGDGAAAvLLs~~~ 336 (547)
.|..+|||+|+||++.+
T Consensus 263 ~s~~~DGAaA~vl~s~e 279 (426)
T PRK08170 263 SSQITDGACWLLLASEE 279 (426)
T ss_pred cCCCCCceEEEEEecHH
Confidence 57889999999998754
No 252
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=40.11 E-value=75 Score=28.76 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCChHHHHHHHc-CCCCceeEEEecC
Q 008975 211 EAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHY-KLRGNIISYNLGG 271 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~--~~~Psla~~I~~~l-Gl~~~~~~fdL~g 271 (547)
+..+-..+-.++.+++.+++|+||-.+++.+++| ...|+.+. .++ |+. +++-+...-
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 17 EILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCC-ccceeccCc
Confidence 3334445556777889999999999999998764 45675543 333 776 676666553
No 253
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=38.58 E-value=1.3e+02 Score=32.43 Aligned_cols=42 Identities=7% Similarity=0.066 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCChHHHHHHHcCCCC
Q 008975 217 FGAIDELFAKTSVK--PKDIGILIVNCSLFNPTPSLSAMVINHYKLRG 262 (547)
Q Consensus 217 ~~Aa~~aL~kagi~--p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~ 262 (547)
..|++++++++|++ ++|||++=++- +.....-+..+.||+.+
T Consensus 269 ~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 269 RIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 57999999999998 79999987652 12233445566777653
No 254
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=37.54 E-value=1e+02 Score=33.42 Aligned_cols=40 Identities=20% Similarity=0.133 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCC
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKL 260 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl 260 (547)
..|++++++++|++|+|||++=+.-. .+...-+..+.||+
T Consensus 258 ~~aa~~a~~~AGi~~~did~~elyD~----Fs~~~~~~~E~lGl 297 (388)
T PRK08142 258 AWSGPAAFAEAGVTPADIKYASIYDS----FTITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecc----chHHHHHHHHHcCC
Confidence 57999999999999999998765521 22223444566665
No 255
>PRK00768 nadE NAD synthetase; Reviewed
Probab=37.45 E-value=4.8e+02 Score=26.90 Aligned_cols=149 Identities=14% Similarity=0.169 Sum_probs=75.5
Q ss_pred HHHHHHHhhhcCCCChHh-----HHHHHHHHHHhCCceEEecC--CcccCCCCCcchHHHHHHHHHHHHHHHHHHHHhCC
Q 008975 156 KRIFMDQSRMTGTFTEEN-----LQFQKKILERSGLGDSTYLP--EAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTS 228 (547)
Q Consensus 156 ~e~~~e~~~~~~~~~~~~-----~~f~~rI~~~sGI~er~~~~--~~~~~~~~~~~ma~~r~ea~~l~~~Aa~~aL~kag 228 (547)
++++++.++....++.+. .+|++..++++|.+.- ++. -+. ++.+. ..-+.+++..-+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~-VlGlSGGI-----DSav~----------a~L~~~A~~~~~ 66 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSL-VLGISGGQ-----DSTLA----------GRLAQLAVEELR 66 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeE-EEECCCCH-----HHHHH----------HHHHHHHHHHhc
Confidence 456666665443444332 4677778888886543 332 122 12221 222333444333
Q ss_pred CCCCCccEEEEe-ccCCC--CCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHH--------HHH-----------
Q 008975 229 VKPKDIGILIVN-CSLFN--PTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDL--------ANN----------- 286 (547)
Q Consensus 229 i~p~dID~LIv~-~s~~~--~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~l--------A~~----------- 286 (547)
.+-...+..+++ +.|.. .....|..+++.+|+. +...+||. ....++...+.. |..
T Consensus 67 ~~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~L 144 (268)
T PRK00768 67 AETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIK-PAVDASVAALEAAGIELSDFVKGNIKARERMIAQ 144 (268)
T ss_pred ccccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHH
Confidence 211112222222 44432 2245677899999984 37888988 366666554421 111
Q ss_pred HHhcCCCCeEEEEEEccccCcccCCCCccccccccccccceEEEE
Q 008975 287 LLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAIL 331 (547)
Q Consensus 287 lL~sg~~~~aLVVstE~~S~~~~~~~dr~~lv~~~lFGDGAAAvL 331 (547)
+.-++ ....||+++.+.|..+ .|- .+.+|||++.+-
T Consensus 145 y~~An-~~~~lvlgT~N~sE~~-~Gy-------~TkyGD~~~d~~ 180 (268)
T PRK00768 145 YAIAG-ATGGLVVGTDHAAEAV-TGF-------FTKFGDGGADIL 180 (268)
T ss_pred HHHHc-cCCCEEEcCCcccHHH-hCc-------eeccCCccccch
Confidence 11122 2356888887766411 111 256788887753
No 256
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=37.40 E-value=1e+02 Score=32.91 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCC------hHHHHHHHcCCCCceeEEEecC
Q 008975 208 ARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPS------LSAMVINHYKLRGNIISYNLGG 271 (547)
Q Consensus 208 ~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Ps------la~~I~~~lGl~~~~~~fdL~g 271 (547)
+|.+.+.+ ...++++|+++|++++|||.+.++..|.. .++ .|--++..++ ++-+.++.
T Consensus 46 ~r~H~~~l-~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~----~PligV~H 109 (345)
T PTZ00340 46 AQHHREHI-LSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWG----KPLVGVNH 109 (345)
T ss_pred HHHHHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcC----CCEeecch
Confidence 34444444 67889999999999999999999988763 232 2333444444 45666663
No 257
>PRK13410 molecular chaperone DnaK; Provisional
Probab=35.63 E-value=85 Score=36.54 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLA 284 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA 284 (547)
.+-..+.++++|+++|++++|||.|+..... ...|.+..+|.+.+|.. ...+++..-|.+.-.|+..|
T Consensus 308 ~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~aa 375 (668)
T PRK13410 308 LDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQAG 375 (668)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHHHH
Confidence 3445666889999999999999998876432 24799999999999854 23445544555555555443
No 258
>PLN03171 chalcone synthase-like protein; Provisional
Probab=34.47 E-value=1e+02 Score=33.41 Aligned_cols=71 Identities=10% Similarity=0.079 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHh---------CCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeE------EEecCccc
Q 008975 210 KEAEAVMFGAIDELFAK---------TSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIIS------YNLGGMGC 274 (547)
Q Consensus 210 ~ea~~l~~~Aa~~aL~k---------agi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~------fdL~gmgC 274 (547)
++...++.+++++++++ .|++++||+.+++ +. .+.+-..+.++||+.++-.. -+.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---PG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---CC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 44445555556666665 5888899987642 11 23556778999999754321 25566666
Q ss_pred hHHHHHHHHHH
Q 008975 275 SAGLISIDLAN 285 (547)
Q Consensus 275 sggl~AL~lA~ 285 (547)
++-..+|+.+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66677777554
No 259
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=34.37 E-value=2.1e+02 Score=30.14 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHhCCCCCCC-ccEEEEecc-CCCCC--CChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHHHHHHh
Q 008975 214 AVMFGAIDELFAKTSVKPKD-IGILIVNCS-LFNPT--PSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLANNLLQ 289 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~d-ID~LIv~~s-~~~~~--Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA~~lL~ 289 (547)
+=...++++|++|+|+++++ +..|.+.-| .+.+. --+-..+.+++. +.+..|-+.. +....+..
T Consensus 47 ~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~e~~~~~lv~~~R~~fp--s~ae~~~v~s----------Da~~sl~a 114 (336)
T KOG1794|consen 47 SRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQEDKNRKLVTEFRDKFP--SVAENFYVTS----------DADGSLAA 114 (336)
T ss_pred HHHHHHHHHHHhhcCCCccCccceeeeecccCCchhHHHHHHHHHHHhcc--chhheeeeeh----------hHHHHHhh
Confidence 33457788899999999998 888887733 33321 223344445543 3456777775 44444444
Q ss_pred cCC---CCeEEEEEEccccCccc-CCCCccccccccccccceEEEEEeccC
Q 008975 290 VHP---NSYALVISMENITLNWY-FGNDRSKLVSNCLFRMGGAAILLSNRF 336 (547)
Q Consensus 290 sg~---~~~aLVVstE~~S~~~~-~~~dr~~lv~~~lFGDGAAAvLLs~~~ 336 (547)
.-+ +..||+-++....+-.. +|..+.---.....|||++|.-+++..
T Consensus 115 ~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 115 ATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred cCCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 433 56788888887655222 222221111235779999998877643
No 260
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=34.36 E-value=69 Score=35.06 Aligned_cols=44 Identities=7% Similarity=0.092 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCChHHHHHHHcC
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYK 259 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~-~s~~~~~Psla~~I~~~lG 259 (547)
...|++++|+++|++|+|||.+-.. +.+..-.+.-...+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 3678999999999999999998765 4332222333334555444
No 261
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=33.17 E-value=1.1e+02 Score=32.88 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=51.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC--------ChHHHHHHHcCCC--CceeEEEecCcc
Q 008975 204 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP--------SLSAMVINHYKLR--GNIISYNLGGMG 273 (547)
Q Consensus 204 ~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P--------sla~~I~~~lGl~--~~~~~fdL~gmg 273 (547)
.+.+...+.-++-.+|++++++++|+++++||++=....+-+..| .-.+.|+++.|++ .|-++-|+.-.|
T Consensus 61 ~l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GG 140 (365)
T PRK09585 61 RLAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGG 140 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCC
Confidence 455666777788899999999999999999999877644322223 2478899999986 123444554333
Q ss_pred chHHHH
Q 008975 274 CSAGLI 279 (547)
Q Consensus 274 Csggl~ 279 (547)
=.|-+.
T Consensus 141 qGAPLv 146 (365)
T PRK09585 141 QGAPLV 146 (365)
T ss_pred CCCCch
Confidence 334443
No 262
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=32.56 E-value=2.2e+02 Score=28.65 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=41.8
Q ss_pred cccccEEEecc----CCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEec
Q 008975 432 KLAFEHFCIHA----GGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFG 505 (547)
Q Consensus 432 ~~did~f~~H~----~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliafG 505 (547)
.+||+|++.=. ....+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.-
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 68999999533 23455558999999998543 6667777777666655333333322 589999998754
No 263
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=32.43 E-value=41 Score=34.62 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEe
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVN 240 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~ 240 (547)
-+|...|++++++++|+.|.||+++=..
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 4778999999999999999999988755
No 264
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=31.63 E-value=1.4e+02 Score=26.99 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCChHHHHHHHcCCCCceeEEEecCc
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLF--NPTPSLSAMVINHYKLRGNIISYNLGGM 272 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~--~~~Psla~~I~~~lGl~~~~~~fdL~gm 272 (547)
.+-..+-.++.+++.+++++||--++++.++| ...| +..+.++|.-.+++-++...|
T Consensus 19 ~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~ 77 (117)
T cd02185 19 LEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEM 77 (117)
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcC
Confidence 33334455677788999999999999997764 4466 445556643336777766653
No 265
>PLN03184 chloroplast Hsp70; Provisional
Probab=29.58 E-value=1.3e+02 Score=35.16 Aligned_cols=67 Identities=10% Similarity=0.042 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHH
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLA 284 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA 284 (547)
+-....++++|++++++++|||.|+..... ..+|.+-.+|.+.+|.. ....++..-|.+--.|+..|
T Consensus 346 ~r~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~aa 412 (673)
T PLN03184 346 DRCKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQAG 412 (673)
T ss_pred HHHHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHHHH
Confidence 334556788999999999999999976422 24799999999999864 23455655555555555433
No 266
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=29.21 E-value=54 Score=29.72 Aligned_cols=51 Identities=20% Similarity=0.281 Sum_probs=33.2
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEE-ecchhhheeEEEEEeccc--CCcc---cCCCCccccc
Q 008975 478 SSLWYELAYSEAKGRIKKGDRTWQIA-FGSGFKCNSAVWKALRSI--NSAK---EKNPWMDEIH 535 (547)
Q Consensus 478 aSi~~~La~~~~~gri~~GDrVllia-fGsG~~~~sav~r~~~~~--~~~~---~~~~w~~~i~ 535 (547)
|.++++=+++.+-| ++.||+|.+.+ || .+|.++-..- .|.- ..+||++++-
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi 87 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVI 87 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceee
Confidence 44455556666554 78999999888 87 4677666543 2210 1589999874
No 267
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=28.94 E-value=1.2e+02 Score=34.78 Aligned_cols=67 Identities=9% Similarity=0.027 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDL 283 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~l 283 (547)
.+=..+.++++|+++|++++|||.|+..... ...|.+..+|.+.+|..+ . .+++..-|.+.-.|+..
T Consensus 308 ~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi~a 374 (616)
T PRK05183 308 VKRTLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAIQA 374 (616)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHHHH
Confidence 3444566789999999999999999976422 247889999999998652 2 24554455554444443
No 268
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=28.73 E-value=1.1e+02 Score=35.01 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
.+=..+.++++|+++|+++++||.|+..... ...|.+-..|.+.+|.. ...+++..-|.+--.|+.
T Consensus 304 ~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~---~~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 304 VERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKE---PNKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCc---ccCCcCcHHHHHHHHHHH
Confidence 3444566789999999999999999976432 23799999999999843 233455445555555554
No 269
>PRK08304 stage V sporulation protein AD; Validated
Probab=28.59 E-value=1.6e+02 Score=31.51 Aligned_cols=87 Identities=17% Similarity=0.208 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCC--C-----ceeEEEec---------CccchHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLR--G-----NIISYNLG---------GMGCSAGLI 279 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~--~-----~~~~fdL~---------gmgCsggl~ 279 (547)
++..+.+=|+++|.+|+|-|++|.+--.. .--.+...+..+-|+. . .+.-||.. |-|||+-+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDlg~-vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDLGR-VGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcchHH-HHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 45566677889999999999999873110 0111222233333331 0 13455532 336776665
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEccc
Q 008975 280 SIDLANNLLQVHPNSYALVISMENI 304 (547)
Q Consensus 280 AL~lA~~lL~sg~~~~aLVVstE~~ 304 (547)
.=.+-+. |+.+..+++|+|+|-.+
T Consensus 289 ~~~~~~~-~~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 289 YGYLLKE-LQKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 5444444 45677899999998774
No 270
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=28.18 E-value=1.4e+02 Score=34.37 Aligned_cols=65 Identities=11% Similarity=0.089 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
+=....++++|+++|+++++||.|+..... ...|.+..+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 307 ~~~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~---~~~~~npdeava~GAa~~ 371 (627)
T PRK00290 307 ERTIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKE---PNKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCC---CCcCcCChHHHHHhHHHH
Confidence 345566789999999999999998876432 24799999999999864 233455455665555554
No 271
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.63 E-value=54 Score=32.58 Aligned_cols=38 Identities=32% Similarity=0.353 Sum_probs=29.0
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEEecchhhhe
Q 008975 472 FGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCN 511 (547)
Q Consensus 472 ~GNtsSaSi~~~La~~~~~gri~~GDrVlliafGsG~~~~ 511 (547)
+|-|-|. +...+.+.+.=.+++||+|+=||-||||..+
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aA 88 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAA 88 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHH
Confidence 5555444 5566777776678999999999999998754
No 272
>CHL00094 dnaK heat shock protein 70
Probab=26.07 E-value=1.5e+02 Score=34.18 Aligned_cols=63 Identities=8% Similarity=0.076 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
....++++|+++|+++++||.|+..... ...|.+..++.+.+|... ..+++..-|.+.-.|+.
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~~pdeava~GAA~~ 373 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKKP---NQSVNPDEVVAIGAAVQ 373 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCCc---CcCCCchhHHHhhhHHH
Confidence 3455789999999999999999876432 357999999999998542 23344333444334443
No 273
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=25.97 E-value=1.6e+02 Score=33.76 Aligned_cols=65 Identities=8% Similarity=0.022 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
+=..+.++++|+++|++++|||.|+..... ...|.+..+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 293 ~~i~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~V~~~l~~~f~~~~---~~~~npdeaVA~GAai~ 357 (599)
T TIGR01991 293 QKTLSICRRALRDAGLSVEEIKGVVLVGGS-TRMPLVRRAVAELFGQEP---LTDIDPDQVVALGAAIQ 357 (599)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCc-CCChHHHHHHHHHhCCCC---CCCCCCcHHHHHHHHHH
Confidence 345567789999999999999998866321 247999999999998642 22455434444444443
No 274
>PRK08329 threonine synthase; Validated
Probab=25.84 E-value=68 Score=34.01 Aligned_cols=34 Identities=24% Similarity=0.201 Sum_probs=30.0
Q ss_pred ccchHHHHHHHHHHcCCCCCCCEEEEEEecchhh
Q 008975 476 SSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFK 509 (547)
Q Consensus 476 sSaSi~~~La~~~~~gri~~GDrVlliafGsG~~ 509 (547)
+|+..+..+..+.++|.+++|++|+++--|+|+|
T Consensus 312 ssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 312 TSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred cHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 3677788888888999999999999999999987
No 275
>PF09936 Methyltrn_RNA_4: SAM-dependent RNA methyltransferase; InterPro: IPR019230 This entry contains proteins that have no known function. They are found as separate proteins and as a C-terminal domain to tRNA (guanine-N(1)-)-methyltransferases to which they are structurally related. ; PDB: 3DCM_X.
Probab=25.36 E-value=1.8e+02 Score=28.33 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=42.9
Q ss_pred ccccccccccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccccccchHHHHHHHHHHcCCCCCCCEEEEEEe
Q 008975 425 KPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAF 504 (547)
Q Consensus 425 ~~~ip~~~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GNtsSaSi~~~La~~~~~gri~~GDrVlliaf 504 (547)
..|-|+-+++++.+.+...=..+++.+++.-|-.+.-+. ..-+++-|+-| +-.|...+++ .|+-.++-|
T Consensus 71 ~~yNp~R~eAl~~v~~~~sle~a~~~I~~~~G~~P~~v~---TsAr~~~~~is---~~~lr~~l~~-----~~~P~LllF 139 (185)
T PF09936_consen 71 AEYNPDRKEALSLVRVVDSLEEAIEDIEEEEGKRPLLVA---TSARKYPNTIS---YAELRRMLEE-----EDRPVLLLF 139 (185)
T ss_dssp GGT-SSSHHHHTTEEEESSHHHHHHHHHHHHSS--EEEE-----SS--SS-B----HHHHHHHHHH-------S-EEEEE
T ss_pred cCcCcCHHHHHhHhccHhhHHHHHHHHHHHhCCCCEEEE---ecCcCCCCCcC---HHHHHHHHhc-----cCCeEEEEe
Confidence 346788889999999999999999999999999887662 23344777654 3445555432 344455566
Q ss_pred cchhh
Q 008975 505 GSGFK 509 (547)
Q Consensus 505 GsG~~ 509 (547)
|.|+.
T Consensus 140 GTGwG 144 (185)
T PF09936_consen 140 GTGWG 144 (185)
T ss_dssp --TT-
T ss_pred cCCCC
Confidence 66643
No 276
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=25.15 E-value=1.9e+02 Score=33.60 Aligned_cols=65 Identities=9% Similarity=0.047 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLA 284 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA 284 (547)
....++++|+++|++++|||.|+..... ..+|..-.+|.+.+|..+ . -+++-.-|.+--.|+..|
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGs-sriP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~a~ 400 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGM-TRMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATLGG 400 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCc-ccChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHHHH
Confidence 3456788999999999999998876321 247999999999998642 2 345544555555555443
No 277
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=24.96 E-value=2.9e+02 Score=29.74 Aligned_cols=95 Identities=19% Similarity=0.210 Sum_probs=48.7
Q ss_pred ChHhHHHHHHHHHHhCCceEEecCCcccCCCCCcchHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEE--EEecc--CCC
Q 008975 170 TEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGIL--IVNCS--LFN 245 (547)
Q Consensus 170 ~~~~~~f~~rI~~~sGI~er~~~~~~~~~~~~~~~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~L--Iv~~s--~~~ 245 (547)
+++.++-+..+.++.|.++-+.-+.-...++.-..=. .+++.+.|++.|+..+.-+.. +++|. +.+
T Consensus 269 ~~~~l~~la~ia~~~g~~~irlT~~Q~l~i~~i~~~~----------~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~C 338 (390)
T TIGR02435 269 TAAQLRGLAQLAQALGDGDLRLTPWRALLVLGLPPER----------ADAAQRALAALGLVTSASDPRARIIACTGAPGC 338 (390)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCcceEEcCCCHHH----------HHHHHHHHHHCCCCcCCCCCeeeEEECCCcccc
Confidence 3333333344667777666655543221111111111 456666777788764433322 45554 222
Q ss_pred -----CCCChHHHHHHHcCCCCceeEEEecCccchHH
Q 008975 246 -----PTPSLSAMVINHYKLRGNIISYNLGGMGCSAG 277 (547)
Q Consensus 246 -----~~Psla~~I~~~lGl~~~~~~fdL~gmgCsgg 277 (547)
.+..++..|.+.++.... ..+.++ ||..+
T Consensus 339 ~~~~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~ 372 (390)
T TIGR02435 339 ASALADTRADAEALAAYCEPTAP-ITVHLS--GCAKG 372 (390)
T ss_pred ccchhhHHHHHHHHHHHhcccCC-cEEEEe--CCccc
Confidence 344567788888765422 455666 88754
No 278
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=24.47 E-value=40 Score=41.52 Aligned_cols=121 Identities=20% Similarity=0.260 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-CC-----CCCC----------ChHHHHHHHcC----CCCceeEEE
Q 008975 213 EAVMFGAIDELFAKTSVKPKDIG----ILIVNCS-LF-----NPTP----------SLSAMVINHYK----LRGNIISYN 268 (547)
Q Consensus 213 ~~l~~~Aa~~aL~kagi~p~dID----~LIv~~s-~~-----~~~P----------sla~~I~~~lG----l~~~~~~fd 268 (547)
..|..+|.-+|+-++|++|.+.. .+.+.|+ +. ...| ..-+|.+||+- ++ -++|.
T Consensus 88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq--GPS~s 165 (2376)
T KOG1202|consen 88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ--GPSFS 165 (2376)
T ss_pred HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc--CCchh
Confidence 45778999999999999998754 2333332 11 1112 12356666653 33 36677
Q ss_pred ecCccchHHHHHHHHHHHHHhcCCCCeEEEEEEccccC-----ccc-----C--CC----CccccccccccccceEEEEE
Q 008975 269 LGGMGCSAGLISIDLANNLLQVHPNSYALVISMENITL-----NWY-----F--GN----DRSKLVSNCLFRMGGAAILL 332 (547)
Q Consensus 269 L~gmgCsggl~AL~lA~~lL~sg~~~~aLVVstE~~S~-----~~~-----~--~~----dr~~lv~~~lFGDGAAAvLL 332 (547)
+. .+||+.+.+++.|.+-++.++..+|+|-++-.+-. .|. . |. |.+. ...-=.||.+|++|
T Consensus 166 ~D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~avll 242 (2376)
T KOG1202|consen 166 VD-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAVLL 242 (2376)
T ss_pred hh-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEEEE
Confidence 77 69999999999999999999999999988776432 111 1 11 1110 12344799999999
Q ss_pred eccCCC
Q 008975 333 SNRFSD 338 (547)
Q Consensus 333 s~~~~~ 338 (547)
.++...
T Consensus 243 qrk~~A 248 (2376)
T KOG1202|consen 243 QRKSLA 248 (2376)
T ss_pred ehhHHH
Confidence 887653
No 279
>PRK12404 stage V sporulation protein AD; Provisional
Probab=24.32 E-value=2.7e+02 Score=29.70 Aligned_cols=87 Identities=13% Similarity=0.218 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCC------c--eeEEEe--------cCccchHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRG------N--IISYNL--------GGMGCSAGLI 279 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~------~--~~~fdL--------~gmgCsggl~ 279 (547)
++..+.+=|+++|.+|+|-|+++.+--. ..--.+...+..+-|+.- | ..-||- +|-|||+-+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGDLg-~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGDLG-HVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcchH-HHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 4566667788999999999999987311 001122233333333321 1 233332 2345666665
Q ss_pred HHHHHHHHHhcCCCCeEEEEEEccc
Q 008975 280 SIDLANNLLQVHPNSYALVISMENI 304 (547)
Q Consensus 280 AL~lA~~lL~sg~~~~aLVVstE~~ 304 (547)
.=.+-+. |+.+..+++|+|++-.+
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 5444443 45677899999998774
No 280
>PRK13411 molecular chaperone DnaK; Provisional
Probab=23.84 E-value=1.6e+02 Score=34.22 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 214 AVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 214 ~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
+=..+.++++|+++|+++++||.++..... ...|.+-.+|.+.+|-+. ...+++..-|.+--.|+.
T Consensus 308 ~~~~~~i~~~L~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~f~~~~--~~~~~npdeaVA~GAAi~ 373 (653)
T PRK13411 308 EATIEPMQQALKDAGLKPEDIDRVILVGGS-TRIPAVQEAIQKFFGGKQ--PDRSVNPDEAVALGAAIQ 373 (653)
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEECCC-CCcchHHHHHHHHcCCcC--cCCCCCchHHHHHHHHHH
Confidence 334567789999999999999988866321 247999999999997431 223344444444444444
No 281
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=22.78 E-value=1.6e+02 Score=31.88 Aligned_cols=24 Identities=17% Similarity=0.339 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 008975 217 FGAIDELFAKTSVKPKDIGILIVN 240 (547)
Q Consensus 217 ~~Aa~~aL~kagi~p~dID~LIv~ 240 (547)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 588999999999999999988755
No 282
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=22.31 E-value=1.9e+02 Score=33.55 Aligned_cols=66 Identities=5% Similarity=0.150 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISIDLA 284 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~lA 284 (547)
....++++|+++++++++||.|+..... ...|.+-.+|.+.+|-+. ...+++..-|.+.-.|+..|
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~aa 380 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGS-TRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQAA 380 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCC-CCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhhHH
Confidence 3456889999999999999998876421 247999999999997431 23345544555555555443
No 283
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=22.15 E-value=2.5e+02 Score=30.03 Aligned_cols=71 Identities=17% Similarity=0.246 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHhCCC-CCCCccEEEEeccCCCCCCChHHHHHHHc--CCCCceeEEEecCccchHHHHHHHHHHHH
Q 008975 211 EAEAVMFGAIDELFAKTSV-KPKDIGILIVNCSLFNPTPSLSAMVINHY--KLRGNIISYNLGGMGCSAGLISIDLANNL 287 (547)
Q Consensus 211 ea~~l~~~Aa~~aL~kagi-~p~dID~LIv~~s~~~~~Psla~~I~~~l--Gl~~~~~~fdL~gmgCsggl~AL~lA~~l 287 (547)
...+...+|++++++++|| +|.|+-.|-+=| |.++. ..|.... |-+ -+..--...|+=|-+..||..|-.|
T Consensus 129 aqV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc----PLLT~-~~i~~A~~RG~~-~~t~dt~~SM~~SrgASALGvAvAL 202 (365)
T PF09663_consen 129 AQVEEVAAAVRAAMADAGITDPADVHFVQVKC----PLLTS-ERIADAKARGKT-VATEDTYESMAYSRGASALGVAVAL 202 (365)
T ss_pred HHHHHHHHHHHHHHHHcCCCChhheeeEEecC----CcCCH-HHHHHHHhCCCc-eeecccccccccccchhHHHHHHHh
Confidence 3445668899999999999 899987776666 23332 2333321 222 1111123335555566667777665
No 284
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=21.87 E-value=1.7e+02 Score=31.60 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=47.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC----------ChHHHHHHHcCCCC--ceeEEEec
Q 008975 204 SMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFNPTP----------SLSAMVINHYKLRG--NIISYNLG 270 (547)
Q Consensus 204 ~ma~~r~ea~~l~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~P----------sla~~I~~~lGl~~--~~~~fdL~ 270 (547)
.+++.+++-...-..|+..++++.++.|+||+.+.+...+....| ....+|+++.|++. |.++=|+.
T Consensus 63 ~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 63 ELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 455666777788889999999999999999996665533322222 34789999999862 33444555
No 285
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=21.28 E-value=1.3e+02 Score=34.84 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCChHHHHHHHcCCCCceeEEEecCccchHHHHHHH
Q 008975 216 MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCSAGLISID 282 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p~dID~LIv~~s~~~~~Psla~~I~~~lGl~~~~~~fdL~gmgCsggl~AL~ 282 (547)
....++++|+++|+++++||.|+..... ...|.+-.+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~f~~~~---~~~~npdeaVA~GAAi~ 412 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGM-TRMPKVSETVKKIFGKEP---SKGVNPDEAVAMGAAIQ 412 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCc-cCChHHHHHHHHHhCCCc---ccCCCCccceeeccHHH
Confidence 3556789999999999999999876421 247999999999998642 22344334444333443
No 286
>PLN02854 3-ketoacyl-CoA synthase
Probab=21.02 E-value=3.6e+02 Score=30.60 Aligned_cols=42 Identities=12% Similarity=0.199 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCC------CCccEEEEeccCCCCCCChHHHHHHHcCCC
Q 008975 216 MFGAIDELFAKTSVKP------KDIGILIVNCSLFNPTPSLSAMVINHYKLR 261 (547)
Q Consensus 216 ~~~Aa~~aL~kagi~p------~dID~LIv~~s~~~~~Psla~~I~~~lGl~ 261 (547)
+...+++.|+++|+++ +|||.++.... ....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqg----gr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAG----GRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECCC----CHHHHHHHHHHcCCC
Confidence 5678899999999997 58988776532 134456789999996
No 287
>PRK13953 mscL large-conductance mechanosensitive channel; Provisional
Probab=20.83 E-value=76 Score=28.99 Aligned_cols=27 Identities=30% Similarity=0.490 Sum_probs=22.3
Q ss_pred eeccceeeehhhhhhhHHHHHHHHhcC
Q 008975 8 FKLNVIDIIVVVVLANVLTFIIETVAG 34 (547)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 34 (547)
.|=||+|.-|-|+++...+-|++.+..
T Consensus 10 ~rGNVidLAVavIiG~AF~~iV~slV~ 36 (125)
T PRK13953 10 LKGNVLDLAVAVVIGAAFGKIVSSLVN 36 (125)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999999999888887777653
No 288
>PF04241 DUF423: Protein of unknown function (DUF423); InterPro: IPR006696 This is a potential integral membrane protein with no known function.
Probab=20.71 E-value=4.8e+02 Score=22.08 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=22.5
Q ss_pred CCCcccccccchhhhhhHHHHHHHHHHHHHHHH
Q 008975 55 LPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLV 87 (547)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (547)
|.+-......+..+.+-+|.+-|.+.++.++++
T Consensus 10 l~~~~~~~~~~~~~tA~~y~~~Halall~~~~~ 42 (89)
T PF04241_consen 10 LKDQLSPEQLEWFQTAVQYQFIHALALLALGLL 42 (89)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333445567788899999999888777653
No 289
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=20.64 E-value=2.1e+02 Score=30.57 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCC-CCCCccEEEEec
Q 008975 209 RKEAEAVMFGAIDELFAKTSV-KPKDIGILIVNC 241 (547)
Q Consensus 209 r~ea~~l~~~Aa~~aL~kagi-~p~dID~LIv~~ 241 (547)
|....+....|+++++.++|| +|.|+-.|-+=|
T Consensus 128 r~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvKc 161 (366)
T TIGR02714 128 RTAQITETAAAVKRAMRDAGIADPADVHFVQVKC 161 (366)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhHeeEEEecC
Confidence 344556678999999999999 788887776666
No 290
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=20.26 E-value=1.5e+02 Score=31.52 Aligned_cols=80 Identities=18% Similarity=0.120 Sum_probs=53.9
Q ss_pred cccccEEEeccCCHHHHHHHHHHcCCCcccccccccccccccc---cccchHHHHHHHHHHcCCCCCCCE-EEEEEecch
Q 008975 432 KLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGN---TSSSSLWYELAYSEAKGRIKKGDR-TWQIAFGSG 507 (547)
Q Consensus 432 ~~did~f~~H~~gr~vl~~v~k~LgL~~e~~e~S~~tl~r~GN---tsSaSi~~~La~~~~~gri~~GDr-VlliafGsG 507 (547)
.+|+|+|=++-+-..+--...|.||++++++..- ---=-.|| +|.+.+...|.+.+++ +.|.+ |.-+.-|.|
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~-GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGG 386 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNVH-GGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGG 386 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCC-CceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEecCCC
Confidence 6899999888888888888899999999998420 00112444 6778899999998885 12333 444555666
Q ss_pred hhheeEEEE
Q 008975 508 FKCNSAVWK 516 (547)
Q Consensus 508 ~~~~sav~r 516 (547)
-. .+++++
T Consensus 387 ga-sa~vie 394 (396)
T KOG1390|consen 387 GA-SAMVIE 394 (396)
T ss_pred ce-eeEEEe
Confidence 43 345554
Done!