Query 008984
Match_columns 547
No_of_seqs 197 out of 688
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 16:10:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008984.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008984hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.0 0.0073 2.5E-07 59.6 13.6 107 284-418 71-179 (261)
2 4a6d_A Hydroxyindole O-methylt 96.5 0.0098 3.4E-07 61.0 9.9 160 272-503 168-331 (353)
3 3dh0_A SAM dependent methyltra 96.3 0.14 4.7E-06 47.4 16.2 114 273-417 27-143 (219)
4 2aot_A HMT, histamine N-methyl 96.2 0.018 6.1E-07 56.8 10.1 116 282-417 51-172 (292)
5 1vl5_A Unknown conserved prote 96.1 0.17 5.8E-06 48.4 16.0 110 275-417 29-140 (260)
6 3bkx_A SAM-dependent methyltra 96.1 0.25 8.6E-06 47.3 17.2 126 274-423 34-165 (275)
7 3dp7_A SAM-dependent methyltra 96.0 0.047 1.6E-06 55.9 12.0 116 274-419 170-289 (363)
8 3dtn_A Putative methyltransfer 95.9 0.095 3.3E-06 49.1 13.0 176 273-503 33-211 (234)
9 1x19_A CRTF-related protein; m 95.7 0.23 7.8E-06 50.3 15.8 115 272-419 179-297 (359)
10 3mcz_A O-methyltransferase; ad 95.7 0.24 8E-06 49.8 15.6 116 274-419 169-289 (352)
11 2ip2_A Probable phenazine-spec 95.4 0.18 6E-06 50.4 13.5 115 273-419 158-274 (334)
12 3sm3_A SAM-dependent methyltra 94.9 0.25 8.5E-06 45.7 12.0 103 284-417 31-141 (235)
13 3mgg_A Methyltransferase; NYSG 94.8 0.41 1.4E-05 46.0 13.7 105 283-419 37-144 (276)
14 2r3s_A Uncharacterized protein 94.8 0.4 1.4E-05 47.5 14.0 116 273-420 153-274 (335)
15 1xxl_A YCGJ protein; structura 94.7 0.97 3.3E-05 42.7 15.9 114 272-418 10-125 (239)
16 1qzz_A RDMB, aclacinomycin-10- 94.7 0.4 1.4E-05 48.5 13.9 113 273-418 172-288 (374)
17 1tw3_A COMT, carminomycin 4-O- 94.6 0.58 2E-05 47.1 14.8 114 273-419 173-290 (360)
18 3h2b_A SAM-dependent methyltra 94.3 0.4 1.4E-05 43.7 11.7 97 284-416 42-139 (203)
19 3ujc_A Phosphoethanolamine N-m 94.2 0.49 1.7E-05 44.7 12.5 121 262-417 34-159 (266)
20 3gwz_A MMCR; methyltransferase 94.1 0.69 2.3E-05 47.3 14.2 115 273-420 192-310 (369)
21 3i53_A O-methyltransferase; CO 94.1 0.26 8.8E-06 49.3 10.6 112 274-418 160-275 (332)
22 3vc1_A Geranyl diphosphate 2-C 94.0 0.86 2.9E-05 45.0 14.3 111 273-417 106-221 (312)
23 3bus_A REBM, methyltransferase 93.9 1.8 6.2E-05 41.2 15.9 112 273-417 51-166 (273)
24 3dlc_A Putative S-adenosyl-L-m 93.6 0.66 2.3E-05 42.2 11.7 112 271-416 32-146 (219)
25 3p9c_A Caffeic acid O-methyltr 93.4 0.38 1.3E-05 49.3 10.8 108 273-419 190-300 (364)
26 3htx_A HEN1; HEN1, small RNA m 93.4 0.32 1.1E-05 56.3 10.9 121 274-419 712-836 (950)
27 3lst_A CALO1 methyltransferase 93.3 0.29 1E-05 49.5 9.7 110 273-418 174-287 (348)
28 3jwg_A HEN1, methyltransferase 93.0 0.96 3.3E-05 41.8 11.9 117 273-419 19-142 (219)
29 3hnr_A Probable methyltransfer 92.8 0.61 2.1E-05 43.0 10.3 43 273-324 35-77 (220)
30 3gu3_A Methyltransferase; alph 92.4 2.4 8.3E-05 41.1 14.6 107 282-419 21-128 (284)
31 4fsd_A Arsenic methyltransfera 92.4 1.1 3.9E-05 45.9 12.7 113 283-417 83-203 (383)
32 3jwh_A HEN1; methyltransferase 92.3 1.4 4.9E-05 40.6 12.2 114 274-417 20-140 (217)
33 3f4k_A Putative methyltransfer 92.1 2 6.8E-05 40.4 13.1 116 268-417 30-150 (257)
34 3reo_A (ISO)eugenol O-methyltr 91.9 0.65 2.2E-05 47.5 10.1 108 273-419 192-302 (368)
35 3l8d_A Methyltransferase; stru 91.7 3.3 0.00011 38.4 14.0 96 284-416 54-151 (242)
36 3e23_A Uncharacterized protein 91.6 0.88 3E-05 41.8 9.7 95 284-416 44-139 (211)
37 2fk8_A Methoxy mycolic acid sy 91.4 11 0.00038 36.8 18.3 110 274-417 81-194 (318)
38 1xtp_A LMAJ004091AAA; SGPP, st 91.2 0.73 2.5E-05 43.3 9.0 113 273-416 83-195 (254)
39 1kpg_A CFA synthase;, cyclopro 90.6 1.9 6.5E-05 41.6 11.5 108 274-414 55-164 (287)
40 3m70_A Tellurite resistance pr 90.5 3.7 0.00013 39.6 13.4 109 273-414 110-219 (286)
41 2xvm_A Tellurite resistance pr 89.5 4.8 0.00016 35.9 12.5 113 272-417 21-136 (199)
42 2o57_A Putative sarcosine dime 89.3 5.8 0.0002 38.3 13.8 113 273-418 68-188 (297)
43 3ege_A Putative methyltransfer 89.0 0.97 3.3E-05 43.4 7.9 43 273-324 24-66 (261)
44 2qe6_A Uncharacterized protein 89.0 5.3 0.00018 39.1 13.4 135 257-418 47-197 (274)
45 3g5l_A Putative S-adenosylmeth 88.3 4 0.00014 38.4 11.6 111 271-416 32-143 (253)
46 3kkz_A Uncharacterized protein 88.3 8.6 0.00029 36.5 14.1 113 271-417 33-150 (267)
47 1nkv_A Hypothetical protein YJ 87.9 4.6 0.00016 37.9 11.7 111 273-417 26-140 (256)
48 4e2x_A TCAB9; kijanose, tetron 87.7 1.8 6E-05 44.6 9.3 109 274-417 98-207 (416)
49 3cgg_A SAM-dependent methyltra 87.7 4.8 0.00017 35.5 11.2 41 274-324 38-78 (195)
50 3ccf_A Cyclopropane-fatty-acyl 87.4 2.6 8.9E-05 40.6 9.8 106 274-417 48-153 (279)
51 3hem_A Cyclopropane-fatty-acyl 87.0 8.3 0.00028 37.5 13.4 115 273-415 62-180 (302)
52 3ofk_A Nodulation protein S; N 87.0 7 0.00024 35.6 12.1 110 274-416 42-152 (216)
53 3ocj_A Putative exported prote 86.9 12 0.00039 36.7 14.4 105 283-416 118-225 (305)
54 4htf_A S-adenosylmethionine-de 86.5 5.7 0.0002 38.2 11.7 101 284-416 69-171 (285)
55 3thr_A Glycine N-methyltransfe 86.5 1.3 4.5E-05 42.8 7.1 124 273-416 47-173 (293)
56 1fp1_D Isoliquiritigenin 2'-O- 86.3 2.8 9.5E-05 42.6 9.7 43 273-322 198-241 (372)
57 1ve3_A Hypothetical protein PH 85.5 14 0.00048 33.6 13.3 102 284-416 39-140 (227)
58 2vdw_A Vaccinia virus capping 85.1 6.5 0.00022 39.2 11.6 109 284-416 49-167 (302)
59 2zfu_A Nucleomethylin, cerebra 84.1 3.8 0.00013 37.5 8.8 39 274-324 57-96 (215)
60 1wzn_A SAM-dependent methyltra 83.6 12 0.0004 35.0 12.1 103 282-417 40-144 (252)
61 3ou2_A SAM-dependent methyltra 83.4 7.3 0.00025 35.2 10.3 109 272-417 34-146 (218)
62 2p7i_A Hypothetical protein; p 83.2 7.9 0.00027 35.5 10.6 105 274-416 32-139 (250)
63 1y8c_A S-adenosylmethionine-de 83.2 7.9 0.00027 35.7 10.6 103 283-417 37-141 (246)
64 2y1w_A Histone-arginine methyl 82.7 6.5 0.00022 39.8 10.6 113 272-416 39-153 (348)
65 1vlm_A SAM-dependent methyltra 82.6 18 0.00062 33.2 12.9 21 484-504 166-186 (219)
66 3bkw_A MLL3908 protein, S-aden 82.4 13 0.00044 34.3 11.8 43 273-323 33-75 (243)
67 3dli_A Methyltransferase; PSI- 82.3 2.1 7.1E-05 40.2 6.3 32 284-324 42-73 (240)
68 2yqz_A Hypothetical protein TT 82.1 8.7 0.0003 35.9 10.6 101 283-417 39-140 (263)
69 3mq2_A 16S rRNA methyltransfer 82.1 1.7 5.9E-05 40.1 5.6 116 275-417 19-139 (218)
70 3giw_A Protein of unknown func 82.0 1.9 6.4E-05 43.4 6.1 139 257-417 48-200 (277)
71 3fzg_A 16S rRNA methylase; met 81.8 2.2 7.6E-05 41.1 6.3 99 286-416 52-150 (200)
72 3g5t_A Trans-aconitate 3-methy 81.3 11 0.00038 36.5 11.4 111 282-416 35-147 (299)
73 1zg3_A Isoflavanone 4'-O-methy 80.7 3.7 0.00013 41.4 7.9 43 274-323 182-226 (358)
74 3r0q_C Probable protein argini 80.5 11 0.00038 38.6 11.5 113 273-417 53-168 (376)
75 3i9f_A Putative type 11 methyl 80.1 12 0.00042 32.6 10.3 101 274-415 8-109 (170)
76 3d2l_A SAM-dependent methyltra 80.0 15 0.0005 33.9 11.2 108 275-417 27-136 (243)
77 1fp2_A Isoflavone O-methyltran 79.9 5.5 0.00019 40.0 8.8 33 283-322 188-220 (352)
78 3lcv_B Sisomicin-gentamicin re 78.9 4 0.00014 41.2 7.3 110 274-416 125-234 (281)
79 3p9n_A Possible methyltransfer 78.6 15 0.00052 32.9 10.6 108 285-422 46-157 (189)
80 3g2m_A PCZA361.24; SAM-depende 78.5 2.6 9.1E-05 41.0 5.8 111 273-417 73-189 (299)
81 2p35_A Trans-aconitate 2-methy 78.1 8.2 0.00028 36.1 8.9 106 274-416 24-130 (259)
82 2gb4_A Thiopurine S-methyltran 77.5 22 0.00077 34.3 12.1 33 283-324 68-100 (252)
83 2p8j_A S-adenosylmethionine-de 77.4 16 0.00056 32.8 10.5 102 284-416 24-126 (209)
84 3bgv_A MRNA CAP guanine-N7 met 76.7 20 0.0007 34.9 11.7 113 283-416 34-153 (313)
85 3e8s_A Putative SAM dependent 76.0 21 0.00074 32.1 10.9 44 271-323 40-83 (227)
86 1g6q_1 HnRNP arginine N-methyl 75.6 16 0.00054 36.5 10.7 112 273-415 28-142 (328)
87 1pjz_A Thiopurine S-methyltran 75.2 11 0.00037 34.7 8.8 33 283-324 22-54 (203)
88 3lcc_A Putative methyl chlorid 75.1 28 0.00095 32.1 11.7 99 285-416 68-169 (235)
89 2fyt_A Protein arginine N-meth 75.0 16 0.00055 36.8 10.7 109 273-415 54-168 (340)
90 3cc8_A Putative methyltransfer 74.7 22 0.00074 32.2 10.6 42 272-323 22-63 (230)
91 1dus_A MJ0882; hypothetical pr 74.3 31 0.0011 30.1 11.3 112 272-417 41-156 (194)
92 3q7e_A Protein arginine N-meth 74.3 21 0.00073 36.0 11.4 113 273-416 56-171 (349)
93 2yxd_A Probable cobalt-precorr 73.9 29 0.001 30.0 10.9 101 275-415 27-128 (183)
94 2kw5_A SLR1183 protein; struct 73.9 47 0.0016 29.6 12.6 51 286-355 32-82 (202)
95 3frh_A 16S rRNA methylase; met 72.9 5.6 0.00019 39.6 6.4 99 284-416 106-204 (253)
96 3iv6_A Putative Zn-dependent a 71.4 5.4 0.00019 39.4 5.9 43 273-324 35-77 (261)
97 3pfg_A N-methyltransferase; N, 71.3 10 0.00035 35.8 7.7 98 284-417 51-150 (263)
98 3u81_A Catechol O-methyltransf 71.0 18 0.00063 33.4 9.3 106 283-417 58-169 (221)
99 3uwp_A Histone-lysine N-methyl 70.0 15 0.0005 39.4 9.2 118 273-416 163-286 (438)
100 3b3j_A Histone-arginine methyl 68.5 11 0.00039 40.2 8.1 113 273-417 148-262 (480)
101 4azs_A Methyltransferase WBDD; 65.9 9.1 0.00031 41.5 6.8 83 283-389 66-149 (569)
102 3eey_A Putative rRNA methylase 65.9 50 0.0017 29.4 10.9 109 285-415 24-136 (197)
103 3bxo_A N,N-dimethyltransferase 65.7 78 0.0027 28.8 12.4 99 283-417 40-140 (239)
104 3hm2_A Precorrin-6Y C5,15-meth 65.5 62 0.0021 27.9 11.2 45 273-324 15-59 (178)
105 2ex4_A Adrenal gland protein A 64.8 51 0.0017 30.5 11.0 105 283-418 79-186 (241)
106 4hg2_A Methyltransferase type 64.1 34 0.0012 33.1 10.0 93 286-418 42-136 (257)
107 2gs9_A Hypothetical protein TT 63.1 20 0.0007 32.3 7.7 38 275-324 29-66 (211)
108 3dxy_A TRNA (guanine-N(7)-)-me 63.1 30 0.001 32.4 9.1 112 283-417 34-149 (218)
109 3ftd_A Dimethyladenosine trans 62.8 32 0.0011 33.3 9.4 110 273-420 21-133 (249)
110 3mti_A RRNA methylase; SAM-dep 61.5 84 0.0029 27.5 11.5 51 286-355 25-76 (185)
111 1wy7_A Hypothetical protein PH 61.2 55 0.0019 29.3 10.3 74 284-383 50-123 (207)
112 3g07_A 7SK snRNA methylphospha 60.6 6.6 0.00023 38.4 4.1 43 275-324 36-80 (292)
113 4hc4_A Protein arginine N-meth 59.8 40 0.0014 35.0 10.1 100 286-415 86-186 (376)
114 1ri5_A MRNA capping enzyme; me 57.3 1.2E+02 0.004 28.5 12.4 107 283-416 64-172 (298)
115 3lbf_A Protein-L-isoaspartate 56.1 1.1E+02 0.0038 27.4 11.4 102 275-415 69-171 (210)
116 2avn_A Ubiquinone/menaquinone 55.4 92 0.0031 29.2 11.2 33 283-324 54-86 (260)
117 2esr_A Methyltransferase; stru 55.3 35 0.0012 29.9 7.6 104 285-421 33-141 (177)
118 3ggd_A SAM-dependent methyltra 55.1 15 0.00051 34.2 5.4 104 285-418 58-164 (245)
119 2b3t_A Protein methyltransfera 55.0 65 0.0022 30.8 10.1 112 283-417 109-237 (276)
120 2g72_A Phenylethanolamine N-me 54.6 22 0.00075 34.2 6.7 44 283-340 71-114 (289)
121 1nv8_A HEMK protein; class I a 54.4 1.4E+02 0.0049 29.0 12.7 113 285-419 125-250 (284)
122 3grz_A L11 mtase, ribosomal pr 53.5 48 0.0016 29.8 8.5 69 269-355 44-115 (205)
123 3m33_A Uncharacterized protein 53.4 27 0.00092 32.3 6.9 31 285-324 50-80 (226)
124 3njr_A Precorrin-6Y methylase; 51.5 1.4E+02 0.0048 27.2 11.5 63 274-355 46-110 (204)
125 4dcm_A Ribosomal RNA large sub 51.2 44 0.0015 34.3 8.6 118 271-416 210-332 (375)
126 2fpo_A Methylase YHHF; structu 50.4 48 0.0016 30.2 8.0 102 285-419 56-161 (202)
127 3e05_A Precorrin-6Y C5,15-meth 50.3 1.2E+02 0.004 27.1 10.6 45 273-324 30-74 (204)
128 1ws6_A Methyltransferase; stru 49.4 49 0.0017 28.3 7.5 32 284-324 42-73 (171)
129 3tfw_A Putative O-methyltransf 48.1 77 0.0026 29.9 9.3 103 284-417 64-169 (248)
130 2h1r_A Dimethyladenosine trans 46.3 80 0.0027 31.0 9.4 44 272-324 31-74 (299)
131 3p2e_A 16S rRNA methylase; met 46.0 41 0.0014 31.6 6.9 35 283-324 24-58 (225)
132 3fut_A Dimethyladenosine trans 45.8 38 0.0013 33.4 6.9 99 259-383 18-121 (271)
133 1zq9_A Probable dimethyladenos 45.3 89 0.003 30.4 9.5 43 273-324 18-60 (285)
134 2gpy_A O-methyltransferase; st 45.1 84 0.0029 28.9 8.9 103 284-417 55-159 (233)
135 1o9g_A RRNA methyltransferase; 44.8 1.8E+02 0.0061 27.0 11.3 45 275-324 43-87 (250)
136 3q87_B N6 adenine specific DNA 44.8 60 0.0021 28.7 7.5 29 286-324 26-54 (170)
137 1jsx_A Glucose-inhibited divis 44.0 64 0.0022 28.8 7.7 54 285-355 67-121 (207)
138 1yzh_A TRNA (guanine-N(7)-)-me 44.0 1.4E+02 0.0049 26.9 10.2 108 284-417 42-155 (214)
139 3tma_A Methyltransferase; thum 43.2 79 0.0027 31.5 8.9 107 282-411 202-310 (354)
140 2yxe_A Protein-L-isoaspartate 41.5 1.9E+02 0.0064 25.9 10.5 45 274-324 68-112 (215)
141 1dl5_A Protein-L-isoaspartate 40.6 1.8E+02 0.0063 28.3 11.1 46 273-324 65-110 (317)
142 3orh_A Guanidinoacetate N-meth 40.1 44 0.0015 31.4 6.1 103 284-415 61-167 (236)
143 3g89_A Ribosomal RNA small sub 39.2 58 0.002 31.1 6.9 56 283-355 80-136 (249)
144 3id6_C Fibrillarin-like rRNA/T 38.9 2.4E+02 0.0083 26.9 11.3 44 274-323 64-110 (232)
145 2ift_A Putative methylase HI07 38.0 1.5E+02 0.0051 26.8 9.3 104 285-420 55-165 (201)
146 1uwv_A 23S rRNA (uracil-5-)-me 36.2 2E+02 0.0068 29.7 10.9 107 276-417 279-388 (433)
147 4dzr_A Protein-(glutamine-N5) 35.7 35 0.0012 30.4 4.4 44 275-325 21-65 (215)
148 3lpm_A Putative methyltransfer 34.9 2.8E+02 0.0097 25.9 11.0 112 284-416 50-174 (259)
149 3adn_A Spermidine synthase; am 33.8 1.3E+02 0.0044 29.7 8.6 137 284-446 84-223 (294)
150 3bwc_A Spermidine synthase; SA 33.5 1E+02 0.0035 30.3 7.8 111 285-417 97-209 (304)
151 2ksn_A Ubiquitin domain-contai 33.4 48 0.0016 30.0 4.7 35 177-212 58-92 (137)
152 2pjd_A Ribosomal RNA small sub 33.3 69 0.0024 31.9 6.6 117 271-416 184-301 (343)
153 1iy9_A Spermidine synthase; ro 33.0 1.8E+02 0.0061 28.1 9.4 135 284-446 76-214 (275)
154 1u2z_A Histone-lysine N-methyl 31.8 1.3E+02 0.0044 31.8 8.6 117 274-416 233-357 (433)
155 1zx0_A Guanidinoacetate N-meth 31.4 2.9E+02 0.0098 25.2 10.2 34 283-324 60-93 (236)
156 4a69_A Histone deacetylase 3,; 31.3 17 0.00057 38.1 1.7 62 374-442 250-314 (376)
157 2jjq_A Uncharacterized RNA met 31.2 3.3E+02 0.011 28.2 11.7 95 285-417 292-386 (425)
158 3ntv_A MW1564 protein; rossman 31.0 1.4E+02 0.0047 27.7 7.9 102 283-417 71-175 (232)
159 3tr6_A O-methyltransferase; ce 29.8 1.2E+02 0.004 27.5 7.1 55 285-355 66-122 (225)
160 1l3i_A Precorrin-6Y methyltran 29.7 2E+02 0.0067 24.7 8.3 37 279-324 29-65 (192)
161 1xj5_A Spermidine synthase 1; 29.6 1.8E+02 0.0063 29.2 9.1 134 285-443 122-257 (334)
162 2vdv_E TRNA (guanine-N(7)-)-me 29.3 2.9E+02 0.0099 25.6 9.9 48 283-343 49-96 (246)
163 1ixk_A Methyltransferase; open 28.7 3.6E+02 0.012 26.4 10.9 67 271-353 106-173 (315)
164 1fbn_A MJ fibrillarin homologu 28.4 3.4E+02 0.012 24.7 11.8 34 284-324 75-108 (230)
165 2pxx_A Uncharacterized protein 28.2 1.1E+02 0.0037 27.1 6.5 34 283-324 42-75 (215)
166 3ew8_A HD8, histone deacetylas 27.5 21 0.00073 37.5 1.7 25 275-299 162-188 (388)
167 3mb5_A SAM-dependent methyltra 27.4 2.2E+02 0.0074 26.3 8.6 45 274-324 84-128 (255)
168 3tqs_A Ribosomal RNA small sub 27.0 91 0.0031 30.2 6.0 42 274-324 20-61 (255)
169 3duw_A OMT, O-methyltransferas 27.0 2E+02 0.0069 25.9 8.2 56 284-355 59-116 (223)
170 1o54_A SAM-dependent O-methylt 27.0 2.5E+02 0.0085 26.5 9.1 45 274-324 103-147 (277)
171 3uzu_A Ribosomal RNA small sub 26.6 1.2E+02 0.0039 29.9 6.8 45 274-324 33-78 (279)
172 3ghf_A Septum site-determining 26.4 99 0.0034 26.9 5.6 50 285-351 49-99 (120)
173 2nxc_A L11 mtase, ribosomal pr 26.4 1.7E+02 0.0058 27.7 7.8 51 285-354 122-172 (254)
174 2avd_A Catechol-O-methyltransf 26.4 2.7E+02 0.0093 25.0 9.0 35 284-324 70-104 (229)
175 3max_A HD2, histone deacetylas 25.9 24 0.00081 36.9 1.7 62 374-442 249-313 (367)
176 1vbf_A 231AA long hypothetical 25.5 3.6E+02 0.012 24.3 9.6 42 274-324 61-102 (231)
177 3gru_A Dimethyladenosine trans 25.5 1.9E+02 0.0064 28.7 8.1 99 260-383 22-125 (295)
178 3dr5_A Putative O-methyltransf 25.4 1.3E+02 0.0046 27.9 6.7 59 280-354 53-114 (221)
179 2qn6_B Translation initiation 24.6 38 0.0013 28.5 2.4 43 310-354 49-91 (93)
180 1af7_A Chemotaxis receptor met 24.2 1.3E+02 0.0046 29.4 6.7 42 283-324 105-147 (274)
181 2h00_A Methyltransferase 10 do 24.2 1.7E+02 0.0058 27.2 7.2 56 283-355 65-122 (254)
182 2j66_A BTRK, decarboxylase; bu 22.6 3.6E+02 0.012 27.5 9.9 68 283-354 133-223 (428)
183 3bzb_A Uncharacterized protein 22.0 4.9E+02 0.017 24.8 10.3 30 285-322 81-110 (281)
184 2ipx_A RRNA 2'-O-methyltransfe 21.9 4.5E+02 0.015 23.8 9.7 34 284-323 78-111 (233)
185 1inl_A Spermidine synthase; be 21.6 2.7E+02 0.0094 27.1 8.5 135 285-446 92-230 (296)
186 3men_A Acetylpolyamine aminohy 21.6 32 0.0011 35.8 1.7 24 276-299 198-223 (362)
187 2pt6_A Spermidine synthase; tr 20.7 1.2E+02 0.0041 30.2 5.6 135 285-445 118-254 (321)
188 1sui_A Caffeoyl-COA O-methyltr 20.3 5.3E+02 0.018 24.1 10.7 34 285-324 81-114 (247)
189 3opn_A Putative hemolysin; str 20.1 1.4E+02 0.0046 28.3 5.6 56 261-325 15-71 (232)
190 1m6y_A S-adenosyl-methyltransf 20.0 47 0.0016 33.3 2.4 84 285-387 28-113 (301)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.04 E-value=0.0073 Score=59.64 Aligned_cols=107 Identities=17% Similarity=0.339 Sum_probs=62.9
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-+|+|+|.|.|. +...|+.+- +.|..+|||||.+. ..++...+++.++ ....+++|..- +..+
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~------~ml~~A~~~~~~~--~~~~~v~~~~~--D~~~- 134 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSP------AMIERCRRHIDAY--KAPTPVDVIEG--DIRD- 134 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCH------HHHHHHHHHHHTS--CCSSCEEEEES--CTTT-
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCH------HHHHHHHHHHHhh--ccCceEEEeec--cccc-
Confidence 3479999999985 445566553 34678999999764 2456555554322 12234566432 2222
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEec
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQ 418 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEq 418 (547)
+...+-.+++. .+.|||+++ ..|..+|+.| +.|+|. ++++.|.
T Consensus 135 ----~~~~~~d~v~~--~~~l~~~~~------~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 135 ----IAIENASMVVL--NFTLQFLEP------SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp ----CCCCSEEEEEE--ESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----cccccccccee--eeeeeecCc------hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 22223334444 457899864 2356677766 779998 4556664
No 2
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.45 E-value=0.0098 Score=60.97 Aligned_cols=160 Identities=16% Similarity=0.244 Sum_probs=90.5
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-c
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-P 350 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-p 350 (547)
...|++++.-...-+|+|+|-+.|. ++.+|+++- |.+|+|.+|.|. .++.+.+++ +.-+. .
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~-------v~~~a~~~~----~~~~~~r 229 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPE-------VVWTAKQHF----SFQEEEQ 229 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHH-------HHHHHHHHS----CC--CCS
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHH-------HHHHHHHhh----hhcccCc
Confidence 4677887765555689999999995 455666554 688999888653 233333322 11122 2
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEecCCCCC-CCCh
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQESKTN-TSPF 427 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEqEan~n-s~~F 427 (547)
++|.+-..- + . .+..+.+ |-+...||+.+|+. ...+|+.+ +.|+|. .++++|.-.+.+ ..+.
T Consensus 230 v~~~~gD~~----~-~--~~~~~D~--~~~~~vlh~~~d~~------~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~ 294 (353)
T 4a6d_A 230 IDFQEGDFF----K-D--PLPEADL--YILARVLHDWADGK------CSHLLERIYHTCKPGGGILVIESLLDEDRRGPL 294 (353)
T ss_dssp EEEEESCTT----T-S--CCCCCSE--EEEESSGGGSCHHH------HHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH
T ss_pred eeeecCccc----c-C--CCCCceE--EEeeeecccCCHHH------HHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH
Confidence 555442211 0 0 1122343 34456789998742 23566666 679997 466777544322 2222
Q ss_pred hHHHHHHHHHHHHHhhhhhccCCCCcHHHHHHHHHHHHHhhhhhhhcccccccccccchhhHHHHHHhCCCccccC
Q 008984 428 FHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRL 503 (547)
Q Consensus 428 ~~RF~EaL~yYsAlFDSLDa~lpr~~~eRi~vE~~~l~reI~NiVAcEG~eRvERhE~~~~Wr~R~~~AGF~~~pL 503 (547)
... +| +|.=++.+.|.+|. ..+|+..++.|||+.+.+
T Consensus 295 ~~~----------~~------------------------dl~ml~~~~g~ert-----~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 295 LTQ----------LY------------------------SLNMLVQTEGQERT-----PTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp HHH----------HH------------------------HHHHHHSSSCCCCC-----HHHHHHHHHHHTCEEEEE
T ss_pred HHH----------HH------------------------HHHHHHhCCCcCCC-----HHHHHHHHHHCCCceEEE
Confidence 111 11 11112345676664 578999999999987654
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.33 E-value=0.14 Score=47.38 Aligned_cols=114 Identities=9% Similarity=0.160 Sum_probs=64.4
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-e
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-F 351 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-F 351 (547)
..|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++||||.+.. .++.+.+++ +..|++ +
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~ 90 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEE------MVNYAWEKV----NKLGLKNV 90 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHH------HHHHHHHHH----HHHTCTTE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHH------HHHHHHHHH----HHcCCCcE
Confidence 456666654555689999999986444444332 34569999997542 344444433 344554 5
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEE-EEe
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVT-LVE 417 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvt-lvE 417 (547)
+|..... .+ +....+..=+|-+...|||+++ ...+|+. .+.|+|.-++ +++
T Consensus 91 ~~~~~d~--~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 91 EVLKSEE--NK-----IPLPDNTVDFIFMAFTFHELSE--------PLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEECBT--TB-----CSSCSSCEEEEEEESCGGGCSS--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeccc--cc-----CCCCCCCeeEEEeehhhhhcCC--------HHHHHHHHHHHhCCCeEEEEEE
Confidence 5543322 22 2223343434445577888854 2345554 4778998444 443
No 4
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.24 E-value=0.018 Score=56.78 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=62.7
Q ss_pred cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhC---CCceEEEEecc
Q 008984 282 EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC---NVPFEFQDTAM 358 (547)
Q Consensus 282 e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~---gvpFeF~~V~~ 358 (547)
....+|+|+|.|.|.--..++..|+.+..+ -.+.+||||.+. +.++...+++ ++.- ++.|+|...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~------~ml~~a~~~~---~~~~~~~~v~~~~~~~-- 118 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSA------EQIAKYKELV---AKTSNLENVKFAWHKE-- 118 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCH------HHHHHHHHHH---HTCSSCTTEEEEEECS--
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCH------HHHHHHHHHH---HhccCCCcceEEEEec--
Confidence 456799999999996444577777665211 133459999764 2344444433 2222 344555433
Q ss_pred cccccccc-cccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEe
Q 008984 359 TACEVERQ-HLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVV-TLVE 417 (547)
Q Consensus 359 ~~~ev~~~-~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvv-tlvE 417 (547)
..+++... .....++..=+|-+...|||++| .+.+|+.+ +-|+|.-. ++++
T Consensus 119 ~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 119 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD--------IPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSC--------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhhhhhhccccCCCceeEEEEeeeeeecCC--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 22221100 00012333445667789999976 34455555 56799943 3443
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.10 E-value=0.17 Score=48.36 Aligned_cols=110 Identities=15% Similarity=0.203 Sum_probs=62.4
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEE
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEF 353 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF 353 (547)
|++.+.-...-+|+|+|.|.|. +...|+.+. + ++||||.+.. .++.+.+ .++..|++ ++|
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~------~l~~a~~----~~~~~~~~~v~~ 89 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTED------ILKVARA----FIEGNGHQQVEY 89 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHH------HHHHHHH----HHHHTTCCSEEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHH------HHHHHHH----HHHhcCCCceEE
Confidence 4444444455689999999886 445666653 2 9999997532 2444433 34445655 555
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEE-EEe
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT-LVE 417 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvt-lvE 417 (547)
... +. ..+...++..=+|-+...|||++| +...+-.+.+-|+|.-.+ +++
T Consensus 90 ~~~--d~-----~~l~~~~~~fD~V~~~~~l~~~~d-------~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 90 VQG--DA-----EQMPFTDERFHIVTCRIAAHHFPN-------PASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEC--CC------CCCSCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEe--cH-----HhCCCCCCCEEEEEEhhhhHhcCC-------HHHHHHHHHHHcCCCCEEEEEE
Confidence 432 21 222233343334455678999975 233444455778998444 444
No 6
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.09 E-value=0.25 Score=47.35 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=68.9
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--ce
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--PF 351 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pF 351 (547)
.|++.+.-.+.-+|+|+|.|.|.--. .|+.+- | |..++||||.+...+.....++.+.+++ +..|+ ..
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~----~l~~~~-g-~~~~v~gvD~s~~~~~~~~~~~~a~~~~----~~~~~~~~v 103 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSA----VLADQV-G-SSGHVTGIDIASPDYGAPLTLGQAWNHL----LAGPLGDRL 103 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHH----HHHHHH-C-TTCEEEEECSSCTTCCSSSCHHHHHHHH----HTSTTGGGE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHH----HHHHHh-C-CCCEEEEEECCccccccHHHHHHHHHHH----HhcCCCCce
Confidence 55666554455689999998885433 344331 2 4569999997653110011355555544 34454 25
Q ss_pred EEEEecccccccccccccccCC--ceEEEeecccccCCCCCCccccchHHHHHHHHHhcCC--cEEEEEecCCCCC
Q 008984 352 EFQDTAMTACEVERQHLRVQPG--EAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSP--KVVTLVEQESKTN 423 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~g--EaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~P--kvvtlvEqEan~n 423 (547)
+|.... ++....+...++ ++|+ +...|||+++. +.+++.++.|.| ..+++.+.....+
T Consensus 104 ~~~~~d----~~~~~~~~~~~~~fD~v~--~~~~l~~~~~~--------~~~~~~~~~l~~~gG~l~~~~~~~~~~ 165 (275)
T 3bkx_A 104 TVHFNT----NLSDDLGPIADQHFDRVV--LAHSLWYFASA--------NALALLFKNMAAVCDHVDVAEWSMQPT 165 (275)
T ss_dssp EEECSC----CTTTCCGGGTTCCCSEEE--EESCGGGSSCH--------HHHHHHHHHHTTTCSEEEEEEECSSCS
T ss_pred EEEECC----hhhhccCCCCCCCEEEEE--EccchhhCCCH--------HHHHHHHHHHhCCCCEEEEEEecCCCC
Confidence 554432 111112222222 3343 44577898752 358899999887 3666776555433
No 7
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.97 E-value=0.047 Score=55.86 Aligned_cols=116 Identities=18% Similarity=0.135 Sum_probs=63.9
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--ce
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--PF 351 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pF 351 (547)
.+++.+.....-+|+|+|.|.|.- ..+|+.+- |.+++|++|.+. .++...+ .++..|+ .+
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~----~~~~~~~~~~v 231 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGKW----ATQCVQYN---KEVEVTIVDLPQ-------QLEMMRK----QTAGLSGSERI 231 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCHH----HHHHHHHS---TTCEEEEEECHH-------HHHHHHH----HHTTCTTGGGE
T ss_pred HHHHHhcccCCCEEEEeCCCcCHH----HHHHHHhC---CCCEEEEEeCHH-------HHHHHHH----HHHhcCcccce
Confidence 345554445567999999999863 34444442 567999999631 2444333 3445565 36
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecC
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKV-VTLVEQE 419 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkv-vtlvEqE 419 (547)
+|..-... +.+ ..+. ..-++++ +...||+++++ ....+|+.+ +.|+|.- ++++|.-
T Consensus 232 ~~~~~d~~--~~~-~~~p-~~~D~v~--~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 232 HGHGANLL--DRD-VPFP-TGFDAVW--MSQFLDCFSEE------EVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp EEEECCCC--SSS-CCCC-CCCSEEE--EESCSTTSCHH------HHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEEEcccc--ccC-CCCC-CCcCEEE--EechhhhCCHH------HHHHHHHHHHHhcCCCcEEEEEeec
Confidence 66543221 110 0011 1223333 44578998753 234567666 6689984 5566643
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=95.91 E-value=0.095 Score=49.10 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=87.5
Q ss_pred HHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCce
Q 008984 273 VVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351 (547)
Q Consensus 273 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 351 (547)
+.+++.+. ..+...|+|+|.|.|.- ...|+.+- |..++||||.+.. .++.+.+++ +..+ .+
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s~~------~~~~a~~~~----~~~~-~~ 94 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMSEK------MLEIAKNRF----RGNL-KV 94 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESCHH------HHHHHHHHT----CSCT-TE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECCHH------HHHHHHHhh----ccCC-CE
Confidence 56666665 44568999999999853 33444432 4579999997532 233333322 2223 44
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEecCCCCCCCChhH
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVEQESKTNTSPFFH 429 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvEqEan~ns~~F~~ 429 (547)
+|... +..++. .. +..=+|-+...|||+++. .+..+|+.+ +.|+|.-++ +++... .+...+..
T Consensus 95 ~~~~~--d~~~~~-----~~-~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~ 159 (234)
T 3dtn_A 95 KYIEA--DYSKYD-----FE-EKYDMVVSALSIHHLEDE------DKKELYKRSYSILKESGIFINADLVH-GETAFIEN 159 (234)
T ss_dssp EEEES--CTTTCC-----CC-SCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEECB-CSSHHHHH
T ss_pred EEEeC--chhccC-----CC-CCceEEEEeCccccCCHH------HHHHHHHHHHHhcCCCcEEEEEEecC-CCChhhhh
Confidence 44332 222221 11 333344455788999642 233466555 668998444 444322 12211222
Q ss_pred HHHHHHHHHHHHhhhhhccCCCCcHHHHHHHHHHHHHhhhhhhhcccccccccccchhhHHHHHHhCCCccccC
Q 008984 430 RFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRL 503 (547)
Q Consensus 430 RF~EaL~yYsAlFDSLDa~lpr~~~eRi~vE~~~l~reI~NiVAcEG~eRvERhE~~~~Wr~R~~~AGF~~~pL 503 (547)
.+... +...+.. ..+ .. .+|.+..... ...+.-....|+..|+.|||+.+.+
T Consensus 160 ~~~~~---~~~~~~~--~~~---~~-----------~~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 160 LNKTI---WRQYVEN--SGL---TE-----------EEIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHHH---HHHHHHT--SSC---CH-----------HHHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HHHHH---HHHHHHh--cCC---CH-----------HHHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 22221 1111111 111 11 1111111111 2345567789999999999987754
No 9
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.72 E-value=0.23 Score=50.35 Aligned_cols=115 Identities=12% Similarity=0.117 Sum_probs=67.8
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP- 350 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 350 (547)
...|++.+.-.+.-.|+|+|.|.|.-- ..|+.+- |.+++|+||. .. .++.+.+++. ..|++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---p~~~~~~~D~-~~------~~~~a~~~~~----~~~~~~ 240 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDIS----AAMLKHF---PELDSTILNL-PG------AIDLVNENAA----EKGVAD 240 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHH----HHHHHHC---TTCEEEEEEC-GG------GHHHHHHHHH----HTTCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHH----HHHHHHC---CCCeEEEEec-HH------HHHHHHHHHH----hcCCCC
Confidence 457778776556679999999998743 3444432 4689999987 32 3555555443 34553
Q ss_pred -eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEecC
Q 008984 351 -FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQE 419 (547)
Q Consensus 351 -FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEqE 419 (547)
++|..-.. .+ ..+..+++++. ...|||++|+ ....+|+.+ +.|+|. .++++|.-
T Consensus 241 ~v~~~~~d~--~~-----~~~~~~D~v~~--~~vlh~~~d~------~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 241 RMRGIAVDI--YK-----ESYPEADAVLF--CRILYSANEQ------LSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp TEEEEECCT--TT-----SCCCCCSEEEE--ESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CEEEEeCcc--cc-----CCCCCCCEEEE--echhccCCHH------HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 66654322 11 12223344444 4578888752 234566655 667997 44566644
No 10
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=95.68 E-value=0.24 Score=49.84 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=67.7
Q ss_pred HHHHhhhccc-eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 274 VIGEAVENEH-IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 274 AILEA~~ge~-rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+- |.+++|++|.+. .++...++ ++..++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~----~~~~~~~~~ 230 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT-------TRDAARKT----IHAHDLGGR 230 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG-------GHHHHHHH----HHHTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH-------HHHHHHHH----HHhcCCCCc
Confidence 6777776555 7899999999986 344454442 458999998732 24544443 3444553
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecC
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKV-VTLVEQE 419 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkv-vtlvEqE 419 (547)
++|...... +.. . .-++.+=+|-+...|||++++ ....+|+.+ +.|+|.- ++++|.-
T Consensus 231 v~~~~~d~~--~~~--~--~~~~~~D~v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 231 VEFFEKNLL--DAR--N--FEGGAADVVMLNDCLHYFDAR------EAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEEECCTT--CGG--G--GTTCCEEEEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEEEeCCcc--cCc--c--cCCCCccEEEEecccccCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 566543221 110 0 012224445556688998753 234566665 6789974 4466643
No 11
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=95.43 E-value=0.18 Score=50.39 Aligned_cols=115 Identities=16% Similarity=0.237 Sum_probs=63.0
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceE
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFE 352 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 352 (547)
..|++.+.-.+ ..|+|+|.|.|. +...|+.+. |.+++|++|. .. .++...+++.+.. +.-.++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~------~~~~a~~~~~~~~--~~~~v~ 220 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EG------SLGVARDNLSSLL--AGERVS 220 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TT------CTHHHHHHTHHHH--HTTSEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HH------HHHHHHHHHhhcC--CCCcEE
Confidence 45666654334 799999999995 344444442 4579999998 32 2555555544321 111355
Q ss_pred EEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEecC
Q 008984 353 FQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQE 419 (547)
Q Consensus 353 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEqE 419 (547)
|..-.. .+ .+. ..-++++ +...|||.+++ ....+|+.+ +.|+|. .++++|.-
T Consensus 221 ~~~~d~--~~----~~~-~~~D~v~--~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 221 LVGGDM--LQ----EVP-SNGDIYL--LSRIIGDLDEA------ASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EEESCT--TT----CCC-SSCSEEE--EESCGGGCCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EecCCC--CC----CCC-CCCCEEE--EchhccCCCHH------HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 544322 11 111 1123333 44678888652 234566665 678997 45566643
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.89 E-value=0.25 Score=45.70 Aligned_cols=103 Identities=25% Similarity=0.334 Sum_probs=56.5
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC------ceEEEEec
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV------PFEFQDTA 357 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv------pFeF~~V~ 357 (547)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++ ...+.++..++ .++|....
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~----~a~~~~~~~~~~~~~~~~~~~~~~d 91 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDINSE------AIR----LAETAARSPGLNQKTGGKAEFKVEN 91 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHH----HHHHHTTCCSCCSSSSCEEEEEECC
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECCHH------HHH----HHHHHHHhcCCccccCcceEEEEec
Confidence 3479999999885 34455555 2 38999997531 122 22333444555 34444322
Q ss_pred ccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 008984 358 MTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVE 417 (547)
Q Consensus 358 ~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvE 417 (547)
. . .+....+..=+|-+...|||+++. ..+..+|+.+ +.|+|.-++ +++
T Consensus 92 ~--~-----~~~~~~~~~D~v~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 92 A--S-----SLSFHDSSFDFAVMQAFLTSVPDP-----KERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp T--T-----SCCSCTTCEEEEEEESCGGGCCCH-----HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--c-----ccCCCCCceeEEEEcchhhcCCCH-----HHHHHHHHHHHHHcCCCeEEEEEE
Confidence 1 1 222223433344455788999762 2234566665 668998444 444
No 13
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.82 E-value=0.41 Score=45.96 Aligned_cols=105 Identities=23% Similarity=0.280 Sum_probs=59.6
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEEEeccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQDTAMTAC 361 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ 361 (547)
+.-+|+|+|.|.|. +...|+.+. |..++||||.+.. .++.+ .+.++..|++ .+|... +..
T Consensus 37 ~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~------~~~~a----~~~~~~~~~~~~~~~~~--d~~ 97 (276)
T 3mgg_A 37 PGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPE------SLEKA----RENTEKNGIKNVKFLQA--NIF 97 (276)
T ss_dssp TTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHH------HHHHH----HHHHHHTTCCSEEEEEC--CGG
T ss_pred CCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHH------HHHHH----HHHHHHcCCCCcEEEEc--ccc
Confidence 44589999999984 334455442 3469999997542 23333 3334455664 444432 211
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEecC
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVV-TLVEQE 419 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvv-tlvEqE 419 (547)
.+...++..=+|-+...|||+++ .+.+|+.+ +-|+|.-+ ++++.+
T Consensus 98 -----~~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 98 -----SLPFEDSSFDHIFVCFVLEHLQS--------PEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp -----GCCSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----cCCCCCCCeeEEEEechhhhcCC--------HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 22233444445556678899975 23555555 67899844 455533
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.81 E-value=0.4 Score=47.51 Aligned_cols=116 Identities=22% Similarity=0.286 Sum_probs=67.6
Q ss_pred HHHHHhhhc--cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc
Q 008984 273 VVIGEAVEN--EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350 (547)
Q Consensus 273 qAILEA~~g--e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 350 (547)
..|++.+.. .+..+|+|+|.+.|. +...|+.+. |..++|++|.+ . .++...+++. ..|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~------~~~~a~~~~~----~~~~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-S------VLEVAKENAR----IQGVA 214 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-H------HHHHHHHHHH----HHTCG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-H------HHHHHHHHHH----hcCCC
Confidence 467777765 667899999999995 344454443 45799999975 3 2555544443 33553
Q ss_pred --eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecCC
Q 008984 351 --FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKV-VTLVEQES 420 (547)
Q Consensus 351 --FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkv-vtlvEqEa 420 (547)
++|...... +. .+ ++.+=+|-+...|||.+++ ....+|+.+ +.|+|.- ++++|...
T Consensus 215 ~~v~~~~~d~~--~~-----~~-~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 215 SRYHTIAGSAF--EV-----DY-GNDYDLVLLPNFLHHFDVA------TCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGEEEEESCTT--TS-----CC-CSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred cceEEEecccc--cC-----CC-CCCCcEEEEcchhccCCHH------HHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 666543221 11 11 1223344455678998642 234555555 6689985 56666543
No 15
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.74 E-value=0.97 Score=42.67 Aligned_cols=114 Identities=18% Similarity=0.229 Sum_probs=63.8
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP- 350 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 350 (547)
+.-+++.+.-.+.-+|+|+|.|.|. +...|+.+- + ++||||.+.. .++.+.++ ++..|++
T Consensus 10 ~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~------~~~~a~~~----~~~~~~~~ 70 (239)
T 1xxl_A 10 LGLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKE------MVEVASSF----AQEKGVEN 70 (239)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHH------HHHHHHHH----HHHHTCCS
T ss_pred cchHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHH------HHHHHHHH----HHHcCCCC
Confidence 3345555555566789999999886 344556552 2 8999997532 24443333 3344554
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEE-EEec
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT-LVEQ 418 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvt-lvEq 418 (547)
++|... +.+ .+...++..=+|-+...+||+++ +...+-...+-|+|.-.+ +++.
T Consensus 71 v~~~~~--d~~-----~~~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 71 VRFQQG--TAE-----SLPFPDDSFDIITCRYAAHHFSD-------VRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEEEC--BTT-----BCCSCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEec--ccc-----cCCCCCCcEEEEEECCchhhccC-------HHHHHHHHHHHcCCCcEEEEEEc
Confidence 555432 222 22233344444445668899864 233444455778998544 4443
No 16
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=94.69 E-value=0.4 Score=48.46 Aligned_cols=113 Identities=25% Similarity=0.349 Sum_probs=65.0
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
..|++.+.-.+..+|+|+|.|.|. +...|+.+- |.+++|++|. . ..++.+.+++ +..|++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~------~~~~~a~~~~----~~~~~~~~ 233 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGG----MLAAIALRA---PHLRGTLVEL-A------GPAERARRRF----ADAGLADR 233 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-H------HHHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhCCCCCCCEEEEECCCcCH----HHHHHHHHC---CCCEEEEEeC-H------HHHHHHHHHH----HhcCCCCc
Confidence 456666654556799999999994 444455442 4689999986 2 1344444443 345553
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEec
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKV-VTLVEQ 418 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkv-vtlvEq 418 (547)
++|...... + .+ +..+=+|-+...|||.+++ ....+|+.+ +.|+|.- ++++|.
T Consensus 234 v~~~~~d~~--~----~~---~~~~D~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 234 VTVAEGDFF--K----PL---PVTADVVLLSFVLLNWSDE------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEECCTT--S----CC---SCCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEeCCCC--C----cC---CCCCCEEEEeccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 666543221 1 11 1223344455678988652 123556555 6689985 556665
No 17
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=94.63 E-value=0.58 Score=47.08 Aligned_cols=114 Identities=23% Similarity=0.324 Sum_probs=65.1
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
..|++.+.-.+..+|+|+|.|.|.-- ..|+.+. |.+++|++|. .. .++.+.+++ +..|++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~----~~l~~~~---~~~~~~~~D~-~~------~~~~a~~~~----~~~~~~~~ 234 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFA----AAIARRA---PHVSATVLEM-AG------TVDTARSYL----KDEGLSDR 234 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHH----HHHHHHC---TTCEEEEEEC-TT------HHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHH----HHHHHhC---CCCEEEEecC-HH------HHHHHHHHH----HhcCCCCc
Confidence 45666665455679999999999543 3444332 4689999986 21 355554443 344553
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEecC
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKV-VTLVEQE 419 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkv-vtlvEqE 419 (547)
++|...... + .+ ++.+=+|-+...|||.+++ ....+|+.+ +.|+|.- ++++|..
T Consensus 235 v~~~~~d~~--~----~~---~~~~D~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 235 VDVVEGDFF--E----PL---PRKADAIILSFVLLNWPDH------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEECCTT--S----CC---SSCEEEEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEeCCCC--C----CC---CCCccEEEEcccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 666543221 1 11 1223344455678988652 123566655 6689984 5556644
No 18
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.29 E-value=0.4 Score=43.73 Aligned_cols=97 Identities=18% Similarity=0.135 Sum_probs=53.2
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++...++ .-..+|... +..
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~--------~~~~~~~~~--d~~-- 94 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATR------LVELARQT--------HPSVTFHHG--TIT-- 94 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHH------HHHHHHHH--------CTTSEEECC--CGG--
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHH------HHHHHHHh--------CCCCeEEeC--ccc--
Confidence 5679999999986 45566666 2 28999997531 23333222 223333222 112
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLV 416 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvtlv 416 (547)
.+...++..=+|-+...|||++.+ + ...+|+. .+.|+|.-.+++
T Consensus 95 ---~~~~~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 95 ---DLSDSPKRWAGLLAWYSLIHMGPG-----E-LPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp ---GGGGSCCCEEEEEEESSSTTCCTT-----T-HHHHHHHHHHTEEEEEEEEE
T ss_pred ---ccccCCCCeEEEEehhhHhcCCHH-----H-HHHHHHHHHHHcCCCcEEEE
Confidence 222333433344455688999743 2 3445554 477899754443
No 19
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=94.21 E-value=0.49 Score=44.65 Aligned_cols=121 Identities=15% Similarity=0.157 Sum_probs=65.1
Q ss_pred chhhHHHHHHHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHH
Q 008984 262 PYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLS 341 (547)
Q Consensus 262 P~~kFa~~tANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~ 341 (547)
.++.-+....-..|++.+.-.+.-+|+|+|.|.|.-= ..|+.+.+ .++||||.+.. .++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~----~~l~~~~~----~~v~~vD~s~~------~~~------- 92 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGC----MYINEKYG----AHTHGIDICSN------IVN------- 92 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHH----HHHHHHHC----CEEEEEESCHH------HHH-------
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHH----HHHHHHcC----CEEEEEeCCHH------HHH-------
Confidence 3344444445567777776556679999999988543 33443322 48999997531 122
Q ss_pred HHHHhCC---CceEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEE-EE
Q 008984 342 EFAASCN---VPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVT-LV 416 (547)
Q Consensus 342 ~fA~s~g---vpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvt-lv 416 (547)
.|+... -..+|..... ..+...++..=+|-+...|||+++ .+ ...+|+. .+-|+|.-.+ ++
T Consensus 93 -~a~~~~~~~~~~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~-----~~-~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 93 -MANERVSGNNKIIFEANDI-------LTKEFPENNFDLIYSRDAILALSL-----EN-KNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp -HHHHTCCSCTTEEEEECCT-------TTCCCCTTCEEEEEEESCGGGSCH-----HH-HHHHHHHHHHHEEEEEEEEEE
T ss_pred -HHHHHhhcCCCeEEEECcc-------ccCCCCCCcEEEEeHHHHHHhcCh-----HH-HHHHHHHHHHHcCCCCEEEEE
Confidence 233221 2344433221 112222344444555678899853 22 3445554 4678997443 44
Q ss_pred e
Q 008984 417 E 417 (547)
Q Consensus 417 E 417 (547)
+
T Consensus 159 ~ 159 (266)
T 3ujc_A 159 D 159 (266)
T ss_dssp E
T ss_pred E
Confidence 4
No 20
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.14 E-value=0.69 Score=47.26 Aligned_cols=115 Identities=16% Similarity=0.177 Sum_probs=66.4
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--c
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--P 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 350 (547)
..|++.+.-.+...|+|+|.+.|. +...|+.+. |.+++|++|.+. .++...+++ ...|+ .
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~----~~~~l~~~ 253 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERPP-------VAEEARELL----TGRGLADR 253 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-------HHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCHH-------HHHHHHHhh----hhcCcCCc
Confidence 466777665667899999999996 444455442 568999998721 244444443 34454 3
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEecCC
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQES 420 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEqEa 420 (547)
++|...... .. +.. .-+++ -+...||+.+|+ ....+|+.+ +.|+|. .++++|.-.
T Consensus 254 v~~~~~d~~-~~-----~p~-~~D~v--~~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 254 CEILPGDFF-ET-----IPD-GADVY--LIKHVLHDWDDD------DVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp EEEEECCTT-TC-----CCS-SCSEE--EEESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred eEEeccCCC-CC-----CCC-CceEE--EhhhhhccCCHH------HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 666554322 11 111 12333 344567888753 233567666 567997 455666443
No 21
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.06 E-value=0.26 Score=49.31 Aligned_cols=112 Identities=19% Similarity=0.137 Sum_probs=63.2
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--e
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--F 351 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 351 (547)
.|++.+.-.+..+|+|+|.+.| .+...|+.+- |.+++|++|.+. .++...+++ +..|+. .
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~----~~~~~~~~v 221 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQG-------PASAAHRRF----LDTGLSGRA 221 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECHH-------HHHHHHHHH----HHTTCTTTE
T ss_pred HHHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCHH-------HHHHHHHhh----hhcCcCcCe
Confidence 3444444345679999999999 3444555443 567999998621 344444443 344553 6
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEec
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQ 418 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEq 418 (547)
+|...... .. +.. .-++ |-|...|||.+|+ ....+|+.+ +.|+|. .++++|.
T Consensus 222 ~~~~~d~~-~~-----~p~-~~D~--v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 222 QVVVGSFF-DP-----LPA-GAGG--YVLSAVLHDWDDL------SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEEECCTT-SC-----CCC-SCSE--EEEESCGGGSCHH------HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEecCCCC-CC-----CCC-CCcE--EEEehhhccCCHH------HHHHHHHHHHHhcCCCCEEEEEee
Confidence 66654332 11 111 1233 3344578998763 234566665 678998 4456654
No 22
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=94.01 E-value=0.86 Score=45.03 Aligned_cols=111 Identities=13% Similarity=0.062 Sum_probs=61.2
Q ss_pred HHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-
Q 008984 273 VVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP- 350 (547)
Q Consensus 273 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 350 (547)
+.|++.+. -...-+|+|+|.|.|.- ...|+.+.+ .++||||.+.. .++.+ .+.++..|++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a----~~~~~~~~~~~ 167 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGS----MVMAHRRFG----SRVEGVTLSAA------QADFG----NRRARELRIDD 167 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHH----HHHHHHHHC----CEEEEEESCHH------HHHHH----HHHHHHTTCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHH----HHHHHHHcC----CEEEEEeCCHH------HHHHH----HHHHHHcCCCC
Confidence 34666665 34456899999988843 334444422 58999997532 23333 3445566765
Q ss_pred -eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHH-HHHhcCCcEEE-EEe
Q 008984 351 -FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR-LVKSLSPKVVT-LVE 417 (547)
Q Consensus 351 -FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~-~Vk~L~Pkvvt-lvE 417 (547)
.+|..... .+ +....+..=+|-+...|||+ + ...+|+ ..+.|+|.-.+ +++
T Consensus 168 ~v~~~~~d~--~~-----~~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 168 HVRSRVCNM--LD-----TPFDKGAVTASWNNESTMYV-D--------LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp TEEEEECCT--TS-----CCCCTTCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCh--hc-----CCCCCCCEeEEEECCchhhC-C--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 66654322 22 22223333344455678888 3 234454 44778997443 444
No 23
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=93.88 E-value=1.8 Score=41.20 Aligned_cols=112 Identities=23% Similarity=0.274 Sum_probs=62.4
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
..|++.+.-...-+|+|+|.|.|.- ...|+.+.+ .++|||+.+.. .++.+ .+.++..|++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s~~------~~~~a----~~~~~~~~~~~~ 112 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKP----AVRLATARD----VRVTGISISRP------QVNQA----NARATAAGLANR 112 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHH----HHHHHHHSC----CEEEEEESCHH------HHHHH----HHHHHHTTCTTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHH----HHHHHHhcC----CEEEEEeCCHH------HHHHH----HHHHHhcCCCcc
Confidence 3455555444556899999988863 334444332 58999997532 23333 3334555664
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVE 417 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvE 417 (547)
++|..... .+ +...++..=+|-+...|||+++ ...+|+.+ +-|+|.-.+ +.+
T Consensus 113 ~~~~~~d~--~~-----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 113 VTFSYADA--MD-----LPFEDASFDAVWALESLHHMPD--------RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEEECCT--TS-----CCSCTTCEEEEEEESCTTTSSC--------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred eEEEECcc--cc-----CCCCCCCccEEEEechhhhCCC--------HHHHHHHHHHHcCCCeEEEEEE
Confidence 55544321 21 2223343334445677899865 24566555 667998443 444
No 24
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.61 E-value=0.66 Score=42.17 Aligned_cols=112 Identities=19% Similarity=0.092 Sum_probs=65.1
Q ss_pred HHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc
Q 008984 271 ANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350 (547)
Q Consensus 271 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 350 (547)
....|++.+.-... +|+|+|.|.|. +...|+.+ |..++||||.+.. .++.+.+ .++..|+.
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~------~~~~a~~----~~~~~~~~ 92 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKH------MNEIALK----NIADANLN 92 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHH------HHHHHHH----HHHHTTCT
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHH------HHHHHHH----HHHhcccc
Confidence 34556666655555 99999999985 44555555 4589999997532 2444433 34455653
Q ss_pred --eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 008984 351 --FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLV 416 (547)
Q Consensus 351 --FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvtlv 416 (547)
++|..... .+ +...++..=+|-+...|||+++ ...+|+. .+.|+|.-.+++
T Consensus 93 ~~~~~~~~d~--~~-----~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 93 DRIQIVQGDV--HN-----IPIEDNYADLIVSRGSVFFWED--------VATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp TTEEEEECBT--TB-----CSSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEEcCH--HH-----CCCCcccccEEEECchHhhccC--------HHHHHHHHHHhCCCCCEEEE
Confidence 55544322 22 2233343334445567899854 2345554 467899855544
No 25
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=93.40 E-value=0.38 Score=49.25 Aligned_cols=108 Identities=19% Similarity=0.249 Sum_probs=60.3
Q ss_pred HHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCce
Q 008984 273 VVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351 (547)
Q Consensus 273 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 351 (547)
..|++++. -...-+|+|+|.|.|.--. .|+.+- |.+++|++|.|.. ++ .|+.. -..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~----~l~~~~---p~~~~~~~D~~~~-------~~--------~a~~~-~~v 246 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVA----AIAAHY---PTIKGVNFDLPHV-------IS--------EAPQF-PGV 246 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHH----HHHHHC---TTCEEEEEECHHH-------HT--------TCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHH----HHHHHC---CCCeEEEecCHHH-------HH--------hhhhc-CCe
Confidence 45667665 3456799999999996444 444332 5779999997421 11 12211 134
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEecC
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQE 419 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEqE 419 (547)
+|..-... + .+ ..+++++ +...||+.+|+ ....+|+.+ +.|+|. .++++|.-
T Consensus 247 ~~~~~D~~--~----~~--p~~D~v~--~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 247 THVGGDMF--K----EV--PSGDTIL--MKWILHDWSDQ------HCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEEECCTT--T----CC--CCCSEEE--EESCGGGSCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEeCCcC--C----CC--CCCCEEE--ehHHhccCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 55443211 1 11 1234443 44578999763 234567766 668997 45566643
No 26
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.40 E-value=0.32 Score=56.31 Aligned_cols=121 Identities=20% Similarity=0.263 Sum_probs=71.6
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHH--HHhCCCc-
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEF--AASCNVP- 350 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~f--A~s~gvp- 350 (547)
.|++.+.....-.|+|+|.|.|. +...|+.+ ++|.-+|||||.+. ..++.+.++|... ++..|++
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p~a~VtGVDIS~------emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTSLQTIIGVDISP------KGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCCCCEEEEEESCH------HHHHHHHHHHHHHTTTTCSSCSE
T ss_pred HHHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCCCCeEEEEECCH------HHHHHHHHHhhhccchhhcCCCc
Confidence 34555554455689999999984 45566655 35667999999764 2467777777654 2234554
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEEecC
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLVEQE 419 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~PkvvtlvEqE 419 (547)
.+|. ..+..++ ....+..=+|-+...|||+++. .+..+|+. .+-|+|.++++....
T Consensus 780 Vefi--qGDa~dL-----p~~d~sFDlVV~~eVLeHL~dp------~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 780 ATLY--DGSILEF-----DSRLHDVDIGTCLEVIEHMEED------QACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp EEEE--ESCTTSC-----CTTSCSCCEEEEESCGGGSCHH------HHHHHHHHHHHTTCCSEEEEEECB
T ss_pred eEEE--ECchHhC-----CcccCCeeEEEEeCchhhCChH------HHHHHHHHHHHHcCCCEEEEEecC
Confidence 4443 3332222 2222333334445688999752 23345554 688999966665543
No 27
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.34 E-value=0.29 Score=49.48 Aligned_cols=110 Identities=13% Similarity=0.177 Sum_probs=60.9
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--c
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--P 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 350 (547)
..|++.+.-.+.-+|+|+|.|.|.- ...|+.+- |.+++|++|.+.. +. .+.++..++ .
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~~-------~~------~~~~~~~~~~~~ 233 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRAEV-------VA------RHRLDAPDVAGR 233 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECHHH-------HT------TCCCCCGGGTTS
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCHHH-------hh------cccccccCCCCC
Confidence 4677776655678999999999864 34444432 5789999997421 11 011111222 2
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEec
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQ 418 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEq 418 (547)
++|..-... . .+. .-+++ -+...|||.+|+ ....+|+.+ +.|+|. .++++|.
T Consensus 234 v~~~~~d~~-~-----~~p--~~D~v--~~~~vlh~~~d~------~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 234 WKVVEGDFL-R-----EVP--HADVH--VLKRILHNWGDE------DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEECCTT-T-----CCC--CCSEE--EEESCGGGSCHH------HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred eEEEecCCC-C-----CCC--CCcEE--EEehhccCCCHH------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 555543221 1 111 22333 344578998763 224566666 678997 4456664
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.96 E-value=0.96 Score=41.77 Aligned_cols=117 Identities=17% Similarity=0.221 Sum_probs=64.6
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC---
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--- 349 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--- 349 (547)
+.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++||||.+.. .++.+.+++ +..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~ 81 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYS------VLERAKDRL----KIDRLPEM 81 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHH------HHHHHHHHH----TGGGSCHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHH------HHHHHHHHH----Hhhccccc
Confidence 445555554555689999999986 455666553 4579999997642 244444433 22233
Q ss_pred ---ceEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecC
Q 008984 350 ---PFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVEQE 419 (547)
Q Consensus 350 ---pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvEqE 419 (547)
.++|..... .. +....+..=+|-|...|||++++ .+..+|+.+ +.|+|.-++++...
T Consensus 82 ~~~~v~~~~~d~--~~-----~~~~~~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 82 QRKRISLFQSSL--VY-----RDKRFSGYDAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp HHTTEEEEECCS--SS-----CCGGGTTCSEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCcceEEEeCcc--cc-----cccccCCCCEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEEEccc
Confidence 345544322 11 11111211123355678998642 234566655 67899976665544
No 29
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.81 E-value=0.61 Score=42.96 Aligned_cols=43 Identities=28% Similarity=0.411 Sum_probs=30.8
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++||||.+.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~ 77 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G---RTVYGIEPSR 77 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T---CEEEEECSCH
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C---CeEEEEeCCH
Confidence 456666665566789999999985 45556665 2 4899999753
No 30
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=92.44 E-value=2.4 Score=41.13 Aligned_cols=107 Identities=21% Similarity=0.210 Sum_probs=59.2
Q ss_pred cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccc
Q 008984 282 EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTAC 361 (547)
Q Consensus 282 e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 361 (547)
.+...|+|+|.|.|. +...|+.+- |+..++||||.+.. .++.+ .+.++..+..++|... +..
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~------~~~~a----~~~~~~~~~~v~~~~~--d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGET------LLAEA----RELFRLLPYDSEFLEG--DAT 82 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHH------HHHHH----HHHHHSSSSEEEEEES--CTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHH------HHHHH----HHHHHhcCCceEEEEc--chh
Confidence 355789999999984 445556552 23479999997532 23333 3334445555555443 222
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEE-EEEecC
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVV-TLVEQE 419 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvv-tlvEqE 419 (547)
++. . ++..=+|-+...|||+++ +...+-...+.|+|.-. +++|..
T Consensus 83 ~~~-----~-~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 83 EIE-----L-NDKYDIAICHAFLLHMTT-------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp TCC-----C-SSCEEEEEEESCGGGCSS-------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcC-----c-CCCeeEEEECChhhcCCC-------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 221 1 233334444567888865 23344445578899844 455543
No 31
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.39 E-value=1.1 Score=45.88 Aligned_cols=113 Identities=12% Similarity=0.121 Sum_probs=62.8
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhC-C----CceEEEEec
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC-N----VPFEFQDTA 357 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-g----vpFeF~~V~ 357 (547)
+.-.|+|+|.|.|.-=..|.+.+ .|..++||||.+. ..++.+.+++.+.+... | -..+|....
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s~------~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d 150 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDMLD------NQLEVARKYVEYHAEKFFGSPSRSNVRFLKGF 150 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECCH------HHHHHHHHTHHHHHHHHHSSTTCCCEEEEESC
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECCH------HHHHHHHHHHHHhhhhcccccCCCceEEEEcc
Confidence 34589999999985433333332 1345999999754 24677777777666553 4 345555432
Q ss_pred ccccccc-cccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 008984 358 MTACEVE-RQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVE 417 (547)
Q Consensus 358 ~~~~ev~-~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvE 417 (547)
. .++. .....+.++..=+|-+...|||++| ...+|+.+ +-|+|.-++ +.+
T Consensus 151 ~--~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 151 I--ENLATAEPEGVPDSSVDIVISNCVCNLSTN--------KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp T--TCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred H--HHhhhcccCCCCCCCEEEEEEccchhcCCC--------HHHHHHHHHHHcCCCCEEEEEE
Confidence 2 2210 0011233343334444567888865 23455544 778998544 444
No 32
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.33 E-value=1.4 Score=40.58 Aligned_cols=114 Identities=25% Similarity=0.338 Sum_probs=62.8
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc---
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--- 350 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--- 350 (547)
.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++||||.+.. .++.+.++ ++..+++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~~ 82 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYR------SLEIAQER----LDRLRLPRNQ 82 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHH------HHHHHHHH----HTTCCCCHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHH------HHHHHHHH----HHHhcCCccc
Confidence 34444444455689999999986 445566552 3469999997542 24444333 3344443
Q ss_pred ---eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 351 ---FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 351 ---FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
++|...... ... .....=++|+ |...|||+++. ....+|+.+ +.|+|.-++++.
T Consensus 83 ~~~v~~~~~d~~--~~~---~~~~~fD~v~--~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 83 WERLQLIQGALT--YQD---KRFHGYDAAT--VIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp HTTEEEEECCTT--SCC---GGGCSCSEEE--EESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEE
T ss_pred CcceEEEeCCcc--ccc---ccCCCcCEEe--eHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEEc
Confidence 555443221 111 1111123333 45678998642 245677665 568999766554
No 33
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.10 E-value=2 Score=40.43 Aligned_cols=116 Identities=21% Similarity=0.074 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhhhc-cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHh
Q 008984 268 YMSANVVIGEAVEN-EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAAS 346 (547)
Q Consensus 268 ~~tANqAILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s 346 (547)
+...-..+++.+.+ ...-+|+|+|.|.|.-- ..|+.+. |. ++||||.+.. .++.+ .+.++.
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~----~~l~~~~---~~-~v~~vD~s~~------~~~~a----~~~~~~ 91 (257)
T 3f4k_A 30 SPEATRKAVSFINELTDDAKIADIGCGTGGQT----LFLADYV---KG-QITGIDLFPD------FIEIF----NENAVK 91 (257)
T ss_dssp CHHHHHHHHTTSCCCCTTCEEEEETCTTSHHH----HHHHHHC---CS-EEEEEESCHH------HHHHH----HHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHH----HHHHHhC---CC-eEEEEECCHH------HHHHH----HHHHHH
Confidence 33334445555532 23458999999998643 3444442 22 9999997542 23333 344556
Q ss_pred CCCc--eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 008984 347 CNVP--FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVE 417 (547)
Q Consensus 347 ~gvp--FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvE 417 (547)
.|++ .+|..... .+ +...++..=+|-+...|||+ + .+.+|+.+ +-|+|.-++ +++
T Consensus 92 ~~~~~~~~~~~~d~--~~-----~~~~~~~fD~v~~~~~l~~~-~--------~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 92 ANCADRVKGITGSM--DN-----LPFQNEELDLIWSEGAIYNI-G--------FERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp TTCTTTEEEEECCT--TS-----CSSCTTCEEEEEEESCSCCC-C--------HHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCceEEEECCh--hh-----CCCCCCCEEEEEecChHhhc-C--------HHHHHHHHHHHcCCCcEEEEEE
Confidence 6776 66654322 22 22223434344455678887 2 23455555 668998444 444
No 34
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=91.93 E-value=0.65 Score=47.54 Aligned_cols=108 Identities=20% Similarity=0.254 Sum_probs=59.9
Q ss_pred HHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCce
Q 008984 273 VVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351 (547)
Q Consensus 273 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 351 (547)
..|++++. -...-+|+|+|.|.|.- ...|+.+- |.+++|++|.+.. + +.|+.. -.+
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~~-------~--------~~a~~~-~~v 248 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAV----ASMIVAKY---PSINAINFDLPHV-------I--------QDAPAF-SGV 248 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECHHH-------H--------TTCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHH----HHHHHHhC---CCCEEEEEehHHH-------H--------Hhhhhc-CCC
Confidence 45666665 34467999999999864 34444432 5789999996321 1 111111 124
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc-EEEEEecC
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK-VVTLVEQE 419 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk-vvtlvEqE 419 (547)
+|..-... + .+. .+++++. ...|||++|+ ....+|+.+ +.|+|. .++++|.-
T Consensus 249 ~~~~~d~~--~----~~p--~~D~v~~--~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 249 EHLGGDMF--D----GVP--KGDAIFI--KWICHDWSDE------HCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEEECCTT--T----CCC--CCSEEEE--ESCGGGBCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEecCCC--C----CCC--CCCEEEE--echhhcCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 55432211 1 111 2355443 4578999763 234567666 678998 45566643
No 35
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=91.72 E-value=3.3 Score=38.42 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=53.9
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhC--CCceEEEEeccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC--NVPFEFQDTAMTAC 361 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~--gvpFeF~~V~~~~~ 361 (547)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .+ +.|+.. +..++|..... .
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~------~~--------~~a~~~~~~~~~~~~~~d~--~ 108 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT--G---YKAVGVDISEV------MI--------QKGKERGEGPDLSFIKGDL--S 108 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH------HH--------HHHHTTTCBTTEEEEECBT--T
T ss_pred CCeEEEEcCCCCH----HHHHHHHc--C---CeEEEEECCHH------HH--------HHHHhhcccCCceEEEcch--h
Confidence 3489999999985 44556655 2 38999997531 12 233333 23344443322 1
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
.+...++..=+|-+...|||+++ +...+-...+.|+|.-++++
T Consensus 109 -----~~~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 109 -----SLPFENEQFEAIMAINSLEWTEE-------PLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp -----BCSSCTTCEEEEEEESCTTSSSC-------HHHHHHHHHHHEEEEEEEEE
T ss_pred -----cCCCCCCCccEEEEcChHhhccC-------HHHHHHHHHHHhCCCeEEEE
Confidence 22233344445556678899854 33444445578899855443
No 36
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=91.58 E-value=0.88 Score=41.75 Aligned_cols=95 Identities=19% Similarity=0.235 Sum_probs=53.1
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-.|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.+++ ++.|.-. +.
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a~~~~-------~~~~~~~----d~--- 94 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G---FDVDATDGSPE------LAAEASRRL-------GRPVRTM----LF--- 94 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHH-------TSCCEEC----CG---
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C---CeEEEECCCHH------HHHHHHHhc-------CCceEEe----ee---
Confidence 3479999999886 45556655 2 38999997531 244444333 4443321 11
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
..+. .++..=+|-+...|||++++ + ...+|+.+ +.|+|.-++++
T Consensus 95 --~~~~-~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 95 --HQLD-AIDAYDAVWAHACLLHVPRD-----E-LADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp --GGCC-CCSCEEEEEECSCGGGSCHH-----H-HHHHHHHHHHHEEEEEEEEE
T ss_pred --ccCC-CCCcEEEEEecCchhhcCHH-----H-HHHHHHHHHHhcCCCcEEEE
Confidence 1122 22333344456788998732 2 34455555 67899865554
No 37
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.44 E-value=11 Score=36.77 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=58.5
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--e
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--F 351 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 351 (547)
.|++.+.-.+.-+|+|+|.|.|.- ...|+.+.| .++||||.+.. .++.+.+ .++..|++ .
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a~~----~~~~~~~~~~v 142 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTT----MRRAVERFD----VNVIGLTLSKN------QHARCEQ----VLASIDTNRSR 142 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHH----HHHHHHHHC----CEEEEEESCHH------HHHHHHH----HHHTSCCSSCE
T ss_pred HHHHhcCCCCcCEEEEEcccchHH----HHHHHHHCC----CEEEEEECCHH------HHHHHHH----HHHhcCCCCce
Confidence 455555444556899999988753 334444322 28999997532 2333333 34455654 4
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEE-EEEe
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVV-TLVE 417 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvv-tlvE 417 (547)
+|... +..++. ..=++|+ +...|||++++ + ...+|+. .+-|+|.-. ++.+
T Consensus 143 ~~~~~--d~~~~~------~~fD~v~--~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 143 QVLLQ--GWEDFA------EPVDRIV--SIEAFEHFGHE-----N-YDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEEES--CGGGCC------CCCSEEE--EESCGGGTCGG-----G-HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEEC--ChHHCC------CCcCEEE--EeChHHhcCHH-----H-HHHHHHHHHHhcCCCcEEEEEE
Confidence 55432 222221 1122333 34578898642 2 3445544 477899844 3443
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=91.23 E-value=0.73 Score=43.32 Aligned_cols=113 Identities=9% Similarity=0.050 Sum_probs=59.6
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceE
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFE 352 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 352 (547)
..+++.+...+.-+|+|+|.|.|.--. .|+.+- ..++||||.+.. .++.+.+++.+ . -..+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~----~l~~~~----~~~v~~vD~s~~------~~~~a~~~~~~----~-~~~~ 143 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITK----NLLTKL----YATTDLLEPVKH------MLEEAKRELAG----M-PVGK 143 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHH----HTHHHH----CSEEEEEESCHH------HHHHHHHHTTT----S-SEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHH----HHHHhh----cCEEEEEeCCHH------HHHHHHHHhcc----C-CceE
Confidence 556666655566789999999986333 333331 248999997531 23333333211 1 2344
Q ss_pred EEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 353 FQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 353 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
|... +..+ +...++..=+|-+...|||++++ +....+-...+.|+|.-++++
T Consensus 144 ~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~~-----~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 144 FILA--SMET-----ATLPPNTYDLIVIQWTAIYLTDA-----DFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp EEES--CGGG-----CCCCSSCEEEEEEESCGGGSCHH-----HHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEc--cHHH-----CCCCCCCeEEEEEcchhhhCCHH-----HHHHHHHHHHHhcCCCeEEEE
Confidence 4332 2222 22233333334455678999642 223334444577899855443
No 39
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=90.61 E-value=1.9 Score=41.55 Aligned_cols=108 Identities=12% Similarity=0.078 Sum_probs=57.0
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--e
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--F 351 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 351 (547)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+.| .++|||+.+.. .++.+.+ .++..|+. .
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s~~------~~~~a~~----~~~~~~~~~~~ 116 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLSKN------QANHVQQ----LVANSENLRSK 116 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCHH------HHHHHHH----HHHTCCCCSCE
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECCHH------HHHHHHH----HHHhcCCCCCe
Confidence 45555544455689999988876 4444553332 29999997532 2333333 33445553 4
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEE
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT 414 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvt 414 (547)
+|... +..++. ..=++|+ +...|||++++ ++...+-...+-|+|.-.+
T Consensus 117 ~~~~~--d~~~~~------~~fD~v~--~~~~l~~~~~~-----~~~~~l~~~~~~LkpgG~l 164 (287)
T 1kpg_A 117 RVLLA--GWEQFD------EPVDRIV--SIGAFEHFGHE-----RYDAFFSLAHRLLPADGVM 164 (287)
T ss_dssp EEEES--CGGGCC------CCCSEEE--EESCGGGTCTT-----THHHHHHHHHHHSCTTCEE
T ss_pred EEEEC--ChhhCC------CCeeEEE--EeCchhhcChH-----HHHHHHHHHHHhcCCCCEE
Confidence 44332 222221 1112333 34578999652 2333344445778998443
No 40
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=90.50 E-value=3.7 Score=39.57 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=63.5
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceE
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFE 352 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 352 (547)
..+++.+...+.-+|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+ .+.++..|+..+
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~------~~~~a----~~~~~~~~~~~~ 170 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNEN------SIAFL----NETKEKENLNIS 170 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHHHH----HHHHHHTTCCEE
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHH------HHHHH----HHHHHHcCCceE
Confidence 455666655566789999999986 44556665 2 38999997542 23333 344555677666
Q ss_pred EEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE
Q 008984 353 FQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT 414 (547)
Q Consensus 353 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt 414 (547)
|..... .+.. . ++..=+|-+...|||++++ .+..+|+.+ +.|+|.-++
T Consensus 171 ~~~~d~--~~~~-----~-~~~fD~i~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l 219 (286)
T 3m70_A 171 TALYDI--NAAN-----I-QENYDFIVSTVVFMFLNRE------RVPSIIKNMKEHTNVGGYN 219 (286)
T ss_dssp EEECCG--GGCC-----C-CSCEEEEEECSSGGGSCGG------GHHHHHHHHHHTEEEEEEE
T ss_pred EEEecc--cccc-----c-cCCccEEEEccchhhCCHH------HHHHHHHHHHHhcCCCcEE
Confidence 654322 2211 1 2322233344577888642 245566655 678998553
No 41
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=89.46 E-value=4.8 Score=35.90 Aligned_cols=113 Identities=14% Similarity=0.103 Sum_probs=61.0
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-c
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-P 350 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-p 350 (547)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++||||.+.. .++.+.++ ++..++ .
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~------~~~~a~~~----~~~~~~~~ 81 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAM------SIANVERI----KSIENLDN 81 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHH----HHHHTCTT
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHH------HHHHHHHH----HHhCCCCC
Confidence 3456666654445599999999886 34455555 2 38999997532 24444333 333455 4
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEe
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVV-TLVE 417 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvv-tlvE 417 (547)
++|... +..++ .. ++..=+|-+...|||++++ + +..+|+.+ +.|+|.-. ++++
T Consensus 82 ~~~~~~--d~~~~-----~~-~~~~D~v~~~~~l~~~~~~-----~-~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 82 LHTRVV--DLNNL-----TF-DRQYDFILSTVVLMFLEAK-----T-IPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEEC--CGGGC-----CC-CCCEEEEEEESCGGGSCGG-----G-HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEEc--chhhC-----CC-CCCceEEEEcchhhhCCHH-----H-HHHHHHHHHHhcCCCeEEEEEE
Confidence 555433 22221 12 2322233344578888632 2 34555554 77899854 3444
No 42
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=89.30 E-value=5.8 Score=38.33 Aligned_cols=113 Identities=11% Similarity=0.147 Sum_probs=63.3
Q ss_pred HHHHHhh----hccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC
Q 008984 273 VVIGEAV----ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN 348 (547)
Q Consensus 273 qAILEA~----~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g 348 (547)
..|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++||||.+.. .++.+.++ ++..|
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~------~~~~a~~~----~~~~~ 129 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPV------QNKRNEEY----NNQAG 129 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHH------HHHHHHHH----HHHHT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHH------HHHHHHHH----HHhcC
Confidence 3445555 32445689999999887555444443 2 38999997542 24444333 33345
Q ss_pred Cc--eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHH-HHHhcCCcE-EEEEec
Q 008984 349 VP--FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR-LVKSLSPKV-VTLVEQ 418 (547)
Q Consensus 349 vp--FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~-~Vk~L~Pkv-vtlvEq 418 (547)
++ ++|... +.. .+...++..=+|-+...|||+++ ...+|+ +.+-|+|.- +++++.
T Consensus 130 ~~~~~~~~~~--d~~-----~~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 130 LADNITVKYG--SFL-----EIPCEDNSYDFIWSQDAFLHSPD--------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CTTTEEEEEC--CTT-----SCSSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcceEEEEc--Ccc-----cCCCCCCCEeEEEecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 53 555433 222 22233444445556678899975 234554 447789984 445543
No 43
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=89.02 E-value=0.97 Score=43.38 Aligned_cols=43 Identities=19% Similarity=0.067 Sum_probs=28.3
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..|++.+.-.+.-.|+|+|.|.|. +...|+. |..++||||.+.
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~ 66 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSI 66 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCH
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCH
Confidence 344555544455689999999986 3344443 346999999753
No 44
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=89.00 E-value=5.3 Score=39.14 Aligned_cols=135 Identities=13% Similarity=0.086 Sum_probs=70.2
Q ss_pred HHhhCchhhHHHHHHHHHHHHh----hhcc-ceeEEEEecccC---ccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCC
Q 008984 257 LFQICPYWKFAYMSANVVIGEA----VENE-HIIHIIDFQIAQ---GTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHA 328 (547)
Q Consensus 257 l~e~sP~~kFa~~tANqAILEA----~~ge-~rVHIIDf~I~~---G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~ 328 (547)
+.++.|-+. ....+|+..++. +... ..-+|+|+|.|. |. +..+ ++.+. |..|+|+||.+.
T Consensus 47 ~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~---~~~~~---p~~~v~~vD~sp---- 114 (274)
T 2qe6_A 47 ACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEV---AQSVN---PDARVVYVDIDP---- 114 (274)
T ss_dssp HHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHH---HHHHC---TTCEEEEEESSH----
T ss_pred HHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHH---HHHhC---CCCEEEEEECCh----
Confidence 444555443 123445554443 2322 234899999998 73 3333 32221 347999999753
Q ss_pred CCchHHHHHHHHHHHHHhCCCceEEEEecccccc-c-c-c---ccccccCCceEEEeecccccCCCCCCccccchHHHHH
Q 008984 329 RGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE-V-E-R---QHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLL 402 (547)
Q Consensus 329 ~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e-v-~-~---~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L 402 (547)
..++...+++. . .-..+|........+ + . + +.+. .+...+|-+...|||++++. ...+|
T Consensus 115 --~~l~~Ar~~~~----~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d--~~~~d~v~~~~vlh~~~d~~------~~~~l 179 (274)
T 2qe6_A 115 --MVLTHGRALLA----K-DPNTAVFTADVRDPEYILNHPDVRRMID--FSRPAAIMLVGMLHYLSPDV------VDRVV 179 (274)
T ss_dssp --HHHHHHHHHHT----T-CTTEEEEECCTTCHHHHHHSHHHHHHCC--TTSCCEEEETTTGGGSCTTT------HHHHH
T ss_pred --HHHHHHHHhcC----C-CCCeEEEEeeCCCchhhhccchhhccCC--CCCCEEEEEechhhhCCcHH------HHHHH
Confidence 23555554442 1 123555443322110 0 0 0 1122 23456667778999998751 45677
Q ss_pred HHHHh-cCCc-EEEEEec
Q 008984 403 RLVKS-LSPK-VVTLVEQ 418 (547)
Q Consensus 403 ~~Vk~-L~Pk-vvtlvEq 418 (547)
+.++. |+|. .+++.+.
T Consensus 180 ~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 180 GAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHHHHHSCTTCEEEEEEE
T ss_pred HHHHHhCCCCcEEEEEEe
Confidence 76655 9998 4444443
No 45
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=88.28 E-value=4 Score=38.37 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=62.9
Q ss_pred HHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc
Q 008984 271 ANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350 (547)
Q Consensus 271 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 350 (547)
.-..|++.+...+.-.|+|+|.|.|. +...|+.+ |+. ++||||.+.. .++.+.+++. +-.
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~~------~~~~a~~~~~------~~~ 91 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSER------MLTEAKRKTT------SPV 91 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHH------HHHHHHHHCC------CTT
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCHH------HHHHHHHhhc------cCC
Confidence 34556666665566789999999984 45556655 222 8999997531 2333332221 234
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
.+|..... ..+....+..=+|-+...|||+.+ ...+|+.+ +.|+|.-++++
T Consensus 92 ~~~~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 92 VCYEQKAI-------EDIAIEPDAYNVVLSSLALHYIAS--------FDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp EEEEECCG-------GGCCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEcch-------hhCCCCCCCeEEEEEchhhhhhhh--------HHHHHHHHHHHcCCCcEEEE
Confidence 45543322 122233344444445568899854 34566555 66899865554
No 46
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=88.28 E-value=8.6 Score=36.52 Aligned_cols=113 Identities=17% Similarity=0.054 Sum_probs=64.2
Q ss_pred HHHHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC
Q 008984 271 ANVVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV 349 (547)
Q Consensus 271 ANqAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv 349 (547)
.-..+++.+. -.+.-+|+|+|.|.|. +...|+.+ |..++||||.+.. .++.+ .+.++..|+
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s~~------~~~~a----~~~~~~~~~ 94 (267)
T 3kkz_A 33 VTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFLSG------FIDIF----NRNARQSGL 94 (267)
T ss_dssp HHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESCHH------HHHHH----HHHHHHTTC
T ss_pred HHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCCHH------HHHHH----HHHHHHcCC
Confidence 3344555554 2345689999998874 45567766 3469999997542 23333 344556677
Q ss_pred c--eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEe
Q 008984 350 P--FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVE 417 (547)
Q Consensus 350 p--FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvE 417 (547)
+ .+|..... .+ +....+..=+|-+...+||+ + ...+|+.+ +-|+|.-++ +.+
T Consensus 95 ~~~v~~~~~d~--~~-----~~~~~~~fD~i~~~~~~~~~-~--------~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 95 QNRVTGIVGSM--DD-----LPFRNEELDLIWSEGAIYNI-G--------FERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp TTTEEEEECCT--TS-----CCCCTTCEEEEEESSCGGGT-C--------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred CcCcEEEEcCh--hh-----CCCCCCCEEEEEEcCCceec-C--------HHHHHHHHHHHcCCCCEEEEEE
Confidence 5 66654322 22 22223444445555677888 3 23455544 678998444 444
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.92 E-value=4.6 Score=37.89 Aligned_cols=111 Identities=18% Similarity=0.129 Sum_probs=60.5
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
..|++.+.-...-+|+|+|.|.|..- ..|+.+.+ .++||||.+.. .++.+ .+.++..|++
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~----~~la~~~~----~~v~gvD~s~~------~l~~a----~~~~~~~~~~~~ 87 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEML----CTWARDHG----ITGTGIDMSSL------FTAQA----KRRAEELGVSER 87 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHH----HHHHHHTC----CEEEEEESCHH------HHHHH----HHHHHHTTCTTT
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHH----HHHHHhcC----CeEEEEeCCHH------HHHHH----HHHHHhcCCCcc
Confidence 34455544344458999999998743 34444332 37899997532 23333 3445556764
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEE-EEe
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVT-LVE 417 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvt-lvE 417 (547)
.+|..... .++ .. ++..=+|-|...+||+++ + ..+|+. .+-|+|.-.+ +++
T Consensus 88 v~~~~~d~--~~~-----~~-~~~fD~V~~~~~~~~~~~-------~-~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 88 VHFIHNDA--AGY-----VA-NEKCDVAACVGATWIAGG-------F-AGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEEESCC--TTC-----CC-SSCEEEEEEESCGGGTSS-------S-HHHHHHHTTSEEEEEEEEEEE
T ss_pred eEEEECCh--HhC-----Cc-CCCCCEEEECCChHhcCC-------H-HHHHHHHHHHcCCCeEEEEec
Confidence 66654322 221 11 233323344567888864 2 345554 4678998544 444
No 48
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=87.74 E-value=1.8 Score=44.60 Aligned_cols=109 Identities=20% Similarity=0.209 Sum_probs=63.6
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEE
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 353 (547)
.|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++||||.+. ...+.|+..|++..-
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~--------------~~~~~a~~~~~~~~~ 154 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSS--------------GVAAKAREKGIRVRT 154 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCH--------------HHHHHHHTTTCCEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCH--------------HHHHHHHHcCCCcce
Confidence 44555544456689999999997 55666655 2 2999999753 223456666776542
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
..+.. .....+...++..=+|-+...|||++| ...+|+.+ +-|+|.-+++++
T Consensus 155 ~~~~~----~~~~~l~~~~~~fD~I~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 155 DFFEK----ATADDVRRTEGPANVIYAANTLCHIPY--------VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp SCCSH----HHHHHHHHHHCCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred eeech----hhHhhcccCCCCEEEEEECChHHhcCC--------HHHHHHHHHHHcCCCeEEEEE
Confidence 11111 111222222344444555678999974 34555555 678998666554
No 49
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=87.72 E-value=4.8 Score=35.49 Aligned_cols=41 Identities=24% Similarity=0.265 Sum_probs=26.0
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|||+.+.
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~~ 78 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLDP 78 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESCH
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCCH
Confidence 44455422 34589999998886 33455555 2 3899999753
No 50
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=87.41 E-value=2.6 Score=40.57 Aligned_cols=106 Identities=14% Similarity=0.146 Sum_probs=55.9
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEE
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 353 (547)
.+++.+.-...-.|+|+|.|.|.-.. .|+. + ..++||||.+.. .++...+++ -++. |
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~----~l~~-~----~~~v~gvD~s~~------~~~~a~~~~------~~~~--~ 104 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTE----KIAQ-S----GAEVLGTDNAAT------MIEKARQNY------PHLH--F 104 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHH----HHHH-T----TCEEEEEESCHH------HHHHHHHHC------TTSC--E
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHH----HHHh-C----CCeEEEEECCHH------HHHHHHhhC------CCCE--E
Confidence 44555544445689999999986433 3443 2 358999997531 233333222 1333 3
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
... +..+ +.. ++..=+|-+...|||++| +...+-.+.+.|+|.-.+++.
T Consensus 105 ~~~--d~~~-----~~~-~~~fD~v~~~~~l~~~~d-------~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 105 DVA--DARN-----FRV-DKPLDAVFSNAMLHWVKE-------PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp EEC--CTTT-----CCC-SSCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEC--Chhh-----CCc-CCCcCEEEEcchhhhCcC-------HHHHHHHHHHhcCCCcEEEEE
Confidence 222 1111 222 233333445567899864 233344445778998555443
No 51
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=87.05 E-value=8.3 Score=37.52 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=62.2
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
..|++.+.-...-+|+|+|.|.|.- ...|+.+.| .++||||.+.. .++.+.+ .++..|++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a~~----~~~~~~~~~~ 123 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGST----MRHAVAEYD----VNVIGLTLSEN------QYAHDKA----MFDEVDSPRR 123 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEECCHH------HHHHHHH----HHHHSCCSSC
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHH----HHHHHHhCC----CEEEEEECCHH------HHHHHHH----HHHhcCCCCc
Confidence 3456665545566899999987753 344444422 58999997542 2444433 34556765
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCcc-ccchHHHHHHHH-HhcCCcEEEE
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVS-TENHRDRLLRLV-KSLSPKVVTL 415 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs-~~n~rd~~L~~V-k~L~Pkvvtl 415 (547)
++|... +..++ . ..=++|+ +...+||++|.... .......+|+.+ +-|+|.-.++
T Consensus 124 v~~~~~--d~~~~-----~-~~fD~v~--~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 180 (302)
T 3hem_A 124 KEVRIQ--GWEEF-----D-EPVDRIV--SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRML 180 (302)
T ss_dssp EEEEEC--CGGGC-----C-CCCSEEE--EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEE
T ss_pred eEEEEC--CHHHc-----C-CCccEEE--EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEE
Confidence 454432 22222 1 1113333 33678999774110 012345566555 6789984443
No 52
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=86.97 E-value=7 Score=35.65 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=61.1
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEE
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 353 (547)
.|.+.+...+.-+|+|+|.|.|. +...|+.+ .-++||||.+.. .++.+.+++. ..+ .++|
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~------~~~~a~~~~~----~~~-~~~~ 101 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH-----CKRLTVIDVMPR------AIGRACQRTK----RWS-HISW 101 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG-----EEEEEEEESCHH------HHHHHHHHTT----TCS-SEEE
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc-----CCEEEEEECCHH------HHHHHHHhcc----cCC-CeEE
Confidence 34445555667899999999984 44556655 249999997542 2444433322 222 3455
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHH-HHHhcCCcEEEEE
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR-LVKSLSPKVVTLV 416 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~-~Vk~L~Pkvvtlv 416 (547)
.... ..++. .++..=+|-+...|||+++. ..+..+|+ ..+.|+|.-++++
T Consensus 102 ~~~d--~~~~~------~~~~fD~v~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 102 AATD--ILQFS------TAELFDLIVVAEVLYYLEDM-----TQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp EECC--TTTCC------CSCCEEEEEEESCGGGSSSH-----HHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEcc--hhhCC------CCCCccEEEEccHHHhCCCH-----HHHHHHHHHHHHHcCCCCEEEE
Confidence 4332 22211 12333344455788999752 12334454 4577899855554
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=86.91 E-value=12 Score=36.67 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=58.6
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEecccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTA 360 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 360 (547)
..-+|+|+|.|.|. +...||.+ ..|..++||||.+.. .++.+ .+.++..|++ ++|.... .
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~------~~~~a----~~~~~~~~~~~~v~~~~~d--~ 179 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPE------ALDGA----TRLAAGHALAGQITLHRQD--A 179 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHH------HHHHH----HHHHTTSTTGGGEEEEECC--G
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHH------HHHHH----HHHHHhcCCCCceEEEECc--h
Confidence 34579999999884 33444422 235679999997532 23333 3344556665 6665432 2
Q ss_pred cccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 361 CEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 361 ~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
.++ ... +..=+|-+...+||+++. .....+|+.+ +.|+|.-++++
T Consensus 180 ~~~-----~~~-~~fD~v~~~~~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 180 WKL-----DTR-EGYDLLTSNGLNIYEPDD-----ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp GGC-----CCC-SCEEEEECCSSGGGCCCH-----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcC-----Ccc-CCeEEEEECChhhhcCCH-----HHHHHHHHHHHHhcCCCeEEEE
Confidence 222 111 333334455678998763 1223455555 67899866655
No 54
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=86.53 E-value=5.7 Score=38.18 Aligned_cols=101 Identities=23% Similarity=0.229 Sum_probs=56.9
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEeccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTAC 361 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~ 361 (547)
.-+|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+. +.++..|++ .+|... +..
T Consensus 69 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~----~~~~~~~~~~~v~~~~~--d~~ 127 (285)
T 4htf_A 69 KLRVLDAGGGEGQ----TAIKMAER--G---HQVILCDLSAQ------MIDRAK----QAAEAKGVSDNMQFIHC--AAQ 127 (285)
T ss_dssp CCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHHHHH----HHHHC-CCGGGEEEEES--CGG
T ss_pred CCEEEEeCCcchH----HHHHHHHC--C---CEEEEEECCHH------HHHHHH----HHHHhcCCCcceEEEEc--CHH
Confidence 5689999999984 45566665 2 48999997532 233333 334455664 455433 222
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
++. ...++..=+|-+...|||+++ +...+-...+-|+|.-++++
T Consensus 128 ~~~----~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 128 DVA----SHLETPVDLILFHAVLEWVAD-------PRSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp GTG----GGCSSCEEEEEEESCGGGCSC-------HHHHHHHHHHTEEEEEEEEE
T ss_pred Hhh----hhcCCCceEEEECchhhcccC-------HHHHHHHHHHHcCCCeEEEE
Confidence 221 022343434445678899865 23334444577899855544
No 55
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=86.50 E-value=1.3 Score=42.79 Aligned_cols=124 Identities=12% Similarity=0.107 Sum_probs=62.7
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC-Cce
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN-VPF 351 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpF 351 (547)
..|++.+.....-+|+|+|.|.|. +...|+.+ |+ ++||||.+.. .++.+.+++.+.....+ ..+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDK------MLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHH------HHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHH------HHHHHHHhhhhccccccccee
Confidence 445555554556789999999986 33445555 32 9999997642 35555444322111100 123
Q ss_pred EEEEecccccccccccccccCCceEEEeec-ccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFP-FVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~-~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
+|... +..++. ..+ ..++..=+|-|. ..|||+++...... .+..+|+.+ +.|+|.-++++
T Consensus 112 ~~~~~--d~~~~~-~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 112 VIEEA--NWLTLD-KDV-PAGDGFDAVICLGNSFAHLPDSKGDQS-EHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp EEEEC--CGGGHH-HHS-CCTTCEEEEEECTTCGGGSCCSSSSSH-HHHHHHHHHHHTEEEEEEEEE
T ss_pred eEeec--ChhhCc-ccc-ccCCCeEEEEEcChHHhhcCccccCHH-HHHHHHHHHHHHcCCCeEEEE
Confidence 33322 111111 011 223333344444 68999987222212 244555555 67899855444
No 56
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=86.26 E-value=2.8 Score=42.63 Aligned_cols=43 Identities=21% Similarity=0.229 Sum_probs=29.4
Q ss_pred HHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecC
Q 008984 273 VVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDD 322 (547)
Q Consensus 273 qAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~ 322 (547)
..|++.+. -.+.-+|+|+|.|.|.- ...|+.+- |.+++|++|.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~ 241 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRN----LELIISKY---PLIKGINFDL 241 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEEC
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHH----HHHHHHHC---CCCeEEEeCh
Confidence 46667664 23457899999998863 44455442 5679999986
No 57
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=85.46 E-value=14 Score=33.63 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=52.9
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-.|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++.+.++ ++..+...+|..... .++
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~------~~~~a~~~----~~~~~~~~~~~~~d~--~~~ 97 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISED------MIRKAREY----AKSRESNVEFIVGDA--RKL 97 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHH------HHHHHHHH----HHHTTCCCEEEECCT--TSC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHH------HHHHHHHH----HHhcCCCceEEECch--hcC
Confidence 4589999999984 34555555 33 9999997532 24444333 333444455543321 111
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
. +.-..=++|+.|.++.+||.. ++...+-...+.|+|.-++++
T Consensus 98 ~---~~~~~~D~v~~~~~~~~~~~~-------~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 98 S---FEDKTFDYVIFIDSIVHFEPL-------ELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp C---SCTTCEEEEEEESCGGGCCHH-------HHHHHHHHHHHHEEEEEEEEE
T ss_pred C---CCCCcEEEEEEcCchHhCCHH-------HHHHHHHHHHHHcCCCcEEEE
Confidence 1 111122456666554455542 233334444577899854433
No 58
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=85.06 E-value=6.5 Score=39.18 Aligned_cols=109 Identities=10% Similarity=0.178 Sum_probs=59.8
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-------ceEEEEe
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-------PFEFQDT 356 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-------pFeF~~V 356 (547)
.-+|+|+|.|.|.- +..++.+. + -++||||.+. ..++.+.++..+ .++ .++|...
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~-~---~~v~GiD~S~------~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~ 110 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGE-I---ALLVATDPDA------DAIARGNERYNK----LNSGIKTKYYKFDYIQE 110 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTT-C---SEEEEEESCH------HHHHHHHHHHHH----HCC----CCCEEEEEEC
T ss_pred CCeEEEEecCCcHh----HHHHHhcC-C---CeEEEEECCH------HHHHHHHHHHHh----ccccccccccccchhhh
Confidence 45799999998842 22233332 1 3799999865 246666655433 233 2556554
Q ss_pred cccccccccccc--cccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 357 AMTACEVERQHL--RVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 357 ~~~~~ev~~~~L--~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
........ ..| ....+..=+|-|.+.||++.+. + +++.+|+.+ +.|+|.-+.++
T Consensus 111 d~~~d~~~-~~l~~~~~~~~FD~V~~~~~lhy~~~~----~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 111 TIRSDTFV-SSVREVFYFGKFNIIDWQFAIHYSFHP----R-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp CTTSSSHH-HHHHTTCCSSCEEEEEEESCGGGTCST----T-THHHHHHHHHHHEEEEEEEEE
T ss_pred hcccchhh-hhhhccccCCCeeEEEECchHHHhCCH----H-HHHHHHHHHHHHcCCCCEEEE
Confidence 33211100 111 0123444466788899997542 1 235666665 77899855443
No 59
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=84.12 E-value=3.8 Score=37.55 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=25.2
Q ss_pred HHHHhhhc-cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVEN-EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.|++.+.. ...-+|+|+|.|.|.- ...|+ .++||||.+.
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s~ 96 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLAS 96 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESSC
T ss_pred HHHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCCC
Confidence 35555542 2346899999998863 23332 4899999764
No 60
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=83.57 E-value=12 Score=35.05 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=54.5
Q ss_pred cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccc
Q 008984 282 EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTAC 361 (547)
Q Consensus 282 e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 361 (547)
.+.-+|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.++ ++..|+.++|..... .
T Consensus 40 ~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~------~l~~a~~~----~~~~~~~v~~~~~d~--~ 98 (252)
T 1wzn_A 40 REVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHEE------MLRVARRK----AKERNLKIEFLQGDV--L 98 (252)
T ss_dssp SCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHH----HHHTTCCCEEEESCG--G
T ss_pred cCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCHH------HHHHHHHH----HHhcCCceEEEECCh--h
Confidence 344689999999985 33455554 2 38999997542 34444443 344566666644322 2
Q ss_pred ccccccccccCCce-EEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 362 EVERQHLRVQPGEA-VVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 362 ev~~~~L~i~~gEa-LaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
++. . ++.. +||.....+|++.. .....+|+.+ +.|+|.-+++++
T Consensus 99 ~~~-----~-~~~fD~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 99 EIA-----F-KNEFDAVTMFFSTIMYFDE------EDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GCC-----C-CSCEEEEEECSSGGGGSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc-----c-CCCccEEEEcCCchhcCCH------HHHHHHHHHHHHHcCCCeEEEEe
Confidence 211 1 1221 33322123344421 2244555554 778999777665
No 61
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=83.39 E-value=7.3 Score=35.23 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=60.5
Q ss_pred HHHHHHhhhc-cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-
Q 008984 272 NVVIGEAVEN-EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV- 349 (547)
Q Consensus 272 NqAILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv- 349 (547)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ | .++||||.+. ...+.|+..|+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~--------------~~~~~a~~~~~~ 90 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSA--------------EMIAEAGRHGLD 90 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCH--------------HHHHHHGGGCCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCH--------------HHHHHHHhcCCC
Confidence 4456666652 333499999999986 34445544 2 3899999753 12333444452
Q ss_pred ceEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEE-EEEe
Q 008984 350 PFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVV-TLVE 417 (547)
Q Consensus 350 pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvv-tlvE 417 (547)
..+|..... ..+ ..++..=+|-+...|||++++ .+..+|+.+ +.|+|.-+ ++++
T Consensus 91 ~~~~~~~d~-------~~~-~~~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 91 NVEFRQQDL-------FDW-TPDRQWDAVFFAHWLAHVPDD------RFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp TEEEEECCT-------TSC-CCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEEeccc-------ccC-CCCCceeEEEEechhhcCCHH------HHHHHHHHHHHHcCCCeEEEEEe
Confidence 345443221 112 223333344456689999752 134555555 67899744 4444
No 62
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=83.23 E-value=7.9 Score=35.54 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=55.5
Q ss_pred HHHHhhhc-cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceE
Q 008984 274 VIGEAVEN-EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFE 352 (547)
Q Consensus 274 AILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFe 352 (547)
.+++.+.. .+.-+|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++.+.+++. -.++
T Consensus 32 ~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~~~~a~~~~~-------~~v~ 89 (250)
T 2p7i_A 32 FMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEE------AISHAQGRLK-------DGIT 89 (250)
T ss_dssp HHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHH------HHHHHHHHSC-------SCEE
T ss_pred HHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHH------HHHHHHHhhh-------CCeE
Confidence 34444432 233469999999885 44566654 33 7999997531 2333322221 1344
Q ss_pred EEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHH--hcCCcEEEEE
Q 008984 353 FQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVK--SLSPKVVTLV 416 (547)
Q Consensus 353 F~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk--~L~Pkvvtlv 416 (547)
|... +..++ ..++..=+|-+...|||+++ .+.+|+.++ -|+|.-.+++
T Consensus 90 ~~~~--d~~~~------~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 90 YIHS--RFEDA------QLPRRYDNIVLTHVLEHIDD--------PVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp EEES--CGGGC------CCSSCEEEEEEESCGGGCSS--------HHHHHHHHHHTTEEEEEEEEE
T ss_pred EEEc--cHHHc------CcCCcccEEEEhhHHHhhcC--------HHHHHHHHHHHhcCCCCEEEE
Confidence 4332 22221 12333334445568999965 245666665 7899744433
No 63
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=83.20 E-value=7.9 Score=35.65 Aligned_cols=103 Identities=12% Similarity=0.124 Sum_probs=56.2
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE 362 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 362 (547)
+.-+|+|+|.|.|.- ...|+.+ | .++||||.+.. .++.+.+++ ...++.++|... +..+
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~---~~~~~~D~s~~------~~~~a~~~~----~~~~~~~~~~~~--d~~~ 95 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F---KNTWAVDLSQE------MLSEAENKF----RSQGLKPRLACQ--DISN 95 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S---SEEEEECSCHH------HHHHHHHHH----HHTTCCCEEECC--CGGG
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C---CcEEEEECCHH------HHHHHHHHH----hhcCCCeEEEec--cccc
Confidence 456899999999873 3445554 2 37999997532 344444443 334555555432 2222
Q ss_pred cccccccccCCceEEEeecc-cccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 363 VERQHLRVQPGEAVVVNFPF-VLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~-~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
+ ... +..=+|-+.. .|||+++. .+ ...+|+.+ +.|+|.-+++++
T Consensus 96 ~-----~~~-~~fD~v~~~~~~l~~~~~~----~~-~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 96 L-----NIN-RKFDLITCCLDSTNYIIDS----DD-LKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp C-----CCS-CCEEEEEECTTGGGGCCSH----HH-HHHHHHHHHTTEEEEEEEEEE
T ss_pred C-----Ccc-CCceEEEEcCccccccCCH----HH-HHHHHHHHHHhcCCCcEEEEE
Confidence 1 111 2222333445 78998641 12 34555555 668998666553
No 64
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=82.69 E-value=6.5 Score=39.79 Aligned_cols=113 Identities=14% Similarity=0.063 Sum_probs=62.7
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP- 350 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 350 (547)
..+|++.+...+.-+|+|+|.|.|. |...++.+. ..++|||+.+. .++ ...+.++..|++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-------~~~----~a~~~~~~~~l~~ 99 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-------MAQ----HAEVLVKSNNLTD 99 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-------HHH----HHHHHHHHTTCTT
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-------HHH----HHHHHHHHcCCCC
Confidence 3677777765556689999998885 444555552 35999999752 132 223334455653
Q ss_pred -eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 351 -FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 351 -FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
++|. ..+..++... ..=+.|+.+ ..++|+..+ +..+.+...-+-|+|.-+++.
T Consensus 100 ~v~~~--~~d~~~~~~~----~~~D~Ivs~--~~~~~~~~~-----~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 100 RIVVI--PGKVEEVSLP----EQVDIIISE--PMGYMLFNE-----RMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp TEEEE--ESCTTTCCCS----SCEEEEEEC--CCBTTBTTT-----SHHHHHHHGGGGEEEEEEEES
T ss_pred cEEEE--EcchhhCCCC----CceeEEEEe--CchhcCChH-----HHHHHHHHHHhhcCCCeEEEE
Confidence 4443 3333332211 011233333 346676543 234556666688899976664
No 65
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=82.65 E-value=18 Score=33.17 Aligned_cols=21 Identities=14% Similarity=0.184 Sum_probs=16.8
Q ss_pred cchhhHHHHHHhCCCccccCC
Q 008984 484 ELLGKWRSRFMMAGFTPYRLS 504 (547)
Q Consensus 484 E~~~~Wr~R~~~AGF~~~pLS 504 (547)
-....|+..|+.+||+.+.+.
T Consensus 166 ~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 166 FSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEe
Confidence 456789999999999887653
No 66
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=82.41 E-value=13 Score=34.25 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=28.9
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDS 323 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~ 323 (547)
..|.+.+.....-.|+|+|.|.|. +...|+.+ |. -++||||.+
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s 75 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLS 75 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCC
Confidence 356666654455689999999885 34455555 22 289999975
No 67
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=82.27 E-value=2.1 Score=40.23 Aligned_cols=32 Identities=19% Similarity=0.427 Sum_probs=21.9
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.-+|+|+|.|.|. +...|+.+ | .++||||.+.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~ 73 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINE 73 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCH
Confidence 3579999998875 34455554 2 2689999753
No 68
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=82.13 E-value=8.7 Score=35.91 Aligned_cols=101 Identities=16% Similarity=0.249 Sum_probs=54.5
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE 362 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 362 (547)
+.-+|+|+|.|.|.- ...|+.+ + .++||||.+.. .++.+.+++ +...-.++|..... .+
T Consensus 39 ~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~~d~--~~ 97 (263)
T 2yqz_A 39 EEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDADAA------MLEVFRQKI----AGVDRKVQVVQADA--RA 97 (263)
T ss_dssp SCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESCHH------HHHHHHHHT----TTSCTTEEEEESCT--TS
T ss_pred CCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECCHH------HHHHHHHHh----hccCCceEEEEccc--cc
Confidence 446899999999863 2345554 2 48999997531 234333332 22223455543321 22
Q ss_pred cccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 008984 363 VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLVE 417 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~PkvvtlvE 417 (547)
+...++..=+|-+...|||+++ ...+|+. .+-|+|.-.+++.
T Consensus 98 -----~~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 -----IPLPDESVHGVIVVHLWHLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -----CCSCTTCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCCCCeeEEEECCchhhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 2223333333444567899864 2345544 4778998554443
No 69
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=82.06 E-value=1.7 Score=40.06 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=60.7
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEE
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEF 353 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF 353 (547)
.++.+.....-+|+|+|.|.|.-= ..|+.+. |..++||||.+.. .++.+.++..+-++..+++ ++|
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~----~~la~~~---p~~~v~gvD~s~~------~l~~~~~~a~~~~~~~~~~~v~~ 85 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHP----YKVARQN---PSRLVVALDADKS------RMEKISAKAAAKPAKGGLPNLLY 85 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHH----HHHHHHC---TTEEEEEEESCGG------GGHHHHHHHTSCGGGTCCTTEEE
T ss_pred HHHHhhccCCCEEEEecCCCCHHH----HHHHHHC---CCCEEEEEECCHH------HHHHHHHHHHHhhhhcCCCceEE
Confidence 344444455678999999998543 3344432 4679999997642 3444444433334445663 555
Q ss_pred EEecccccccccccccccCCceEEEeecc-cc--cCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPF-VL--HHMPDESVSTENHRDRLLRL-VKSLSPKVVTLVE 417 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~-~L--Hhl~desvs~~n~rd~~L~~-Vk~L~PkvvtlvE 417 (547)
... +..++.. .-.. +.+.+.+.+ .+ ||+++. ..+|+. .+-|+|.-.+++.
T Consensus 86 ~~~--d~~~l~~---~~~~-d~v~~~~~~~~~~~~~~~~~--------~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 86 LWA--TAERLPP---LSGV-GELHVLMPWGSLLRGVLGSS--------PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EEC--CSTTCCS---CCCE-EEEEEESCCHHHHHHHHTSS--------SHHHHHHHHTEEEEEEEEEE
T ss_pred Eec--chhhCCC---CCCC-CEEEEEccchhhhhhhhccH--------HHHHHHHHHHcCCCcEEEEE
Confidence 432 2222211 1111 334444332 22 366542 234544 4778999666653
No 70
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=82.01 E-value=1.9 Score=43.44 Aligned_cols=139 Identities=16% Similarity=0.176 Sum_probs=75.6
Q ss_pred HHhhCchhhHHHHHHHHHHHHhh----hccce-eEEEEecccCccc--hHHHHHHHhcCCCCCCeEEEEeecCCCCCCCC
Q 008984 257 LFQICPYWKFAYMSANVVIGEAV----ENEHI-IHIIDFQIAQGTQ--WMFLLHALAKRPGGSPLVRITGIDDSQSTHAR 329 (547)
Q Consensus 257 l~e~sP~~kFa~~tANqAILEA~----~ge~r-VHIIDf~I~~G~Q--WpsLiqaLA~RpggPP~LRITgI~~~~s~~~~ 329 (547)
+.++.|-++ ...-+|.+.+.-+ .++.. =+|+|+|.|.|+. -..+.|.+ .|..|||+||.+..
T Consensus 48 ~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~------~P~arVv~VD~sp~---- 116 (277)
T 3giw_A 48 MSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSV------APESRVVYVDNDPI---- 116 (277)
T ss_dssp HHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHH------CTTCEEEEEECCHH----
T ss_pred HHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHH------CCCCEEEEEeCChH----
Confidence 567788874 2344788877643 33333 3799999997652 22233333 14579999997542
Q ss_pred CchHHHHHHHHHHHHHhCCCceEEEEecccccc--cc----cccccccCCceEEEeecccccCCCCCCccccchHHHHHH
Q 008984 330 GGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE--VE----RQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR 403 (547)
Q Consensus 330 ~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e--v~----~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~ 403 (547)
.|.....+|.. .-.-..+|........+ +. ...+ ..++.++|-+...|||++|+ ..+...|=+
T Consensus 117 --mLa~Ar~~l~~---~~~~~~~~v~aD~~~~~~~l~~~~~~~~~--D~~~p~av~~~avLH~l~d~----~~p~~~l~~ 185 (277)
T 3giw_A 117 --VLTLSQGLLAS---TPEGRTAYVEADMLDPASILDAPELRDTL--DLTRPVALTVIAIVHFVLDE----DDAVGIVRR 185 (277)
T ss_dssp --HHHTTHHHHCC---CSSSEEEEEECCTTCHHHHHTCHHHHTTC--CTTSCCEEEEESCGGGSCGG----GCHHHHHHH
T ss_pred --HHHHHHHHhcc---CCCCcEEEEEecccChhhhhccccccccc--CcCCcchHHhhhhHhcCCch----hhHHHHHHH
Confidence 34444444421 11113555544332111 00 0122 23454556677789999874 223444456
Q ss_pred HHHhcCCcE-EEEEe
Q 008984 404 LVKSLSPKV-VTLVE 417 (547)
Q Consensus 404 ~Vk~L~Pkv-vtlvE 417 (547)
..+.|.|-= +++.+
T Consensus 186 l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 186 LLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHTTSCTTCEEEEEE
T ss_pred HHHhCCCCcEEEEEe
Confidence 667889984 44544
No 71
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=81.84 E-value=2.2 Score=41.11 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=57.1
Q ss_pred EEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccccc
Q 008984 286 HIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVER 365 (547)
Q Consensus 286 HIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 365 (547)
+|+|+|.|.| +|--.++.+ +|..+++|+|-+. ..++.+.+ .|+..|+...+.... +..
T Consensus 52 ~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~------~~leiar~----~~~~~g~~~~v~~~d-----~~~ 109 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDR------AEIAFLSS----IIGKLKTTIKYRFLN-----KES 109 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCH------HHHHHHHH----HHHHSCCSSEEEEEC-----CHH
T ss_pred eEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCH------HHHHHHHH----HHHhcCCCccEEEec-----ccc
Confidence 7899987765 444455544 3566999999754 23555544 456778875443321 100
Q ss_pred ccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 366 QHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 366 ~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
. .-++.+=+|=..-.||+|.+. +..+.+.++.|+|.-|++.
T Consensus 110 ~---~~~~~~DvVLa~k~LHlL~~~-------~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 110 D---VYKGTYDVVFLLKMLPVLKQQ-------DVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp H---HTTSEEEEEEEETCHHHHHHT-------TCCHHHHHHTCEEEEEEEE
T ss_pred c---CCCCCcChhhHhhHHHhhhhh-------HHHHHHHHHHhCCCCEEEE
Confidence 1 112221222222368998332 3457789999999977664
No 72
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=81.28 E-value=11 Score=36.49 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=58.2
Q ss_pred cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccc
Q 008984 282 EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTAC 361 (547)
Q Consensus 282 e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ 361 (547)
.+.-+|+|+|.|.|.- ...|+.+- +|..++||||.+.. .++.+.+++.+. ....-.++|..... .
T Consensus 35 ~~~~~vLDiGcG~G~~----~~~la~~~--~~~~~v~gvD~s~~------~~~~a~~~~~~~-~~~~~~v~~~~~d~--~ 99 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTA----TLQMAQEL--KPFEQIIGSDLSAT------MIKTAEVIKEGS-PDTYKNVSFKISSS--D 99 (299)
T ss_dssp SCCSEEEEETCTTTHH----HHHHHHHS--SCCSEEEEEESCHH------HHHHHHHHHHHC-C-CCTTEEEEECCT--T
T ss_pred CCCCEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeCCHH------HHHHHHHHHHhc-cCCCCceEEEEcCH--H
Confidence 3567899999998843 34444321 14569999997542 244444333221 00133456654332 2
Q ss_pred cccccc-ccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 008984 362 EVERQH-LRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLV 416 (547)
Q Consensus 362 ev~~~~-L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvtlv 416 (547)
++.... ..+..+..=+|-+...|||+ + ...+|+. .+.|+|.-++++
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 221111 11112445556666788998 4 2345554 467899855433
No 73
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=80.70 E-value=3.7 Score=41.35 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=28.6
Q ss_pred HHHHhh--hccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 008984 274 VIGEAV--ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDS 323 (547)
Q Consensus 274 AILEA~--~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~ 323 (547)
.|++.+ .=.+.-+|+|+|.|.|.- ...|+.+- |.+++|++|.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~ 226 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGV----TKLIHEIF---PHLKCTVFDQP 226 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHH----HHHHHHHC---TTSEEEEEECH
T ss_pred HHHHhcchhccCCCEEEEECCCcCHH----HHHHHHHC---CCCeEEEeccH
Confidence 566666 212346899999999854 44454442 56799999864
No 74
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=80.49 E-value=11 Score=38.58 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=62.7
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
.+|++...-.+.-.|+|+|.|.|. +...|+.+ |. -++||||.+ .. ++.+ .+.++..|++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~----ls~~la~~--g~--~~V~gvD~s-~~------~~~a----~~~~~~~~~~~~ 113 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGI----LAIWSAQA--GA--RKVYAVEAT-KM------ADHA----RALVKANNLDHI 113 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTH----HHHHHHHT--TC--SEEEEEESS-TT------HHHH----HHHHHHTTCTTT
T ss_pred HHHHhccccCCCCEEEEeccCcCH----HHHHHHhc--CC--CEEEEEccH-HH------HHHH----HHHHHHcCCCCe
Confidence 344444443445689999999983 34445555 22 399999976 32 3333 4445566776
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
.+|.. .+..++... ..=++|+.+ ...|.+..+ ..++.+|+.+ +-|+|.-+++..
T Consensus 114 v~~~~--~d~~~~~~~----~~~D~Iv~~--~~~~~l~~e-----~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 114 VEVIE--GSVEDISLP----EKVDVIISE--WMGYFLLRE-----SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEEEE--SCGGGCCCS----SCEEEEEEC--CCBTTBTTT-----CTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEEE--CchhhcCcC----CcceEEEEc--Chhhcccch-----HHHHHHHHHHHhhCCCCeEEEEe
Confidence 55543 333333221 111234433 334555432 2357788887 889999666543
No 75
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=80.07 E-value=12 Score=32.56 Aligned_cols=101 Identities=13% Similarity=0.106 Sum_probs=55.9
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEE
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 353 (547)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++||||.+.. .++.+.++ .-..+|
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~------~~~~a~~~--------~~~v~~ 64 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVI------ALKEVKEK--------FDSVIT 64 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHH------HHHHHHHH--------CTTSEE
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHH------HHHHHHHh--------CCCcEE
Confidence 34555555566789999999886 344555542 3 9999997531 23333332 112333
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHH-HHHhcCCcEEEE
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR-LVKSLSPKVVTL 415 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~-~Vk~L~Pkvvtl 415 (547)
.... +....+..=+|-+...+||+++ ...+|+ ..+.|+|.-.++
T Consensus 65 ~~~d----------~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~ 109 (170)
T 3i9f_A 65 LSDP----------KEIPDNSVDFILFANSFHDMDD--------KQHVISEVKRILKDDGRVI 109 (170)
T ss_dssp ESSG----------GGSCTTCEEEEEEESCSTTCSC--------HHHHHHHHHHHEEEEEEEE
T ss_pred EeCC----------CCCCCCceEEEEEccchhcccC--------HHHHHHHHHHhcCCCCEEE
Confidence 2211 2223333334445567888854 234554 457789974443
No 76
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=79.97 E-value=15 Score=33.90 Aligned_cols=108 Identities=21% Similarity=0.220 Sum_probs=57.4
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEE
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 354 (547)
|++.+... -.|+|+|.|.|. +...|+.+ .++||||.+.. .++.+.+++ +..+...+|.
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~ 84 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEE------MLEIAQEKA----METNRHVDFW 84 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHH------HHHHHHHHH----HHTTCCCEEE
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHH------HHHHHHHhh----hhcCCceEEE
Confidence 44444432 478999999885 44456554 48999997542 344444333 3345555554
Q ss_pred EecccccccccccccccCCce-EEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 355 DTAMTACEVERQHLRVQPGEA-VVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 355 ~V~~~~~ev~~~~L~i~~gEa-LaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
.... .++ ... +.. +|+...-.+||+.+. .....+|+.+ +.|+|.-+++++
T Consensus 85 ~~d~--~~~-----~~~-~~fD~v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 85 VQDM--REL-----ELP-EPVDAITILCDSLNYLQTE-----ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp ECCG--GGC-----CCS-SCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCh--hhc-----CCC-CCcCEEEEeCCchhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 4322 111 111 222 333222267888541 2234555554 678998666654
No 77
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=79.88 E-value=5.5 Score=39.99 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=24.1
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDD 322 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~ 322 (547)
+.-+|+|+|.|.|. +...|+.+- |.+++|++|.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 44689999999985 445555442 4579999997
No 78
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=78.90 E-value=4 Score=41.22 Aligned_cols=110 Identities=10% Similarity=0.056 Sum_probs=66.0
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEE
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 353 (547)
+|++.+.. --.|+|+|.|.|. |--.++. .+|..+++++|-+.. .++.+ .+++...|+++.|
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId~~------~le~a----~~~l~~~g~~~~~ 185 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDIDAR------LVGFV----DEALTRLNVPHRT 185 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESBHH------HHHHH----HHHHHHTTCCEEE
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCCHH------HHHHH----HHHHHhcCCCceE
Confidence 45555533 3378999888763 2222222 247899999996542 34444 4456777999888
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
........ . .-.+++++.+| ..+|||.++ .+...++.+..|+|..|++.
T Consensus 186 ~v~D~~~~-----~-p~~~~DvaL~l--kti~~Le~q------~kg~g~~ll~aL~~~~vvVS 234 (281)
T 3lcv_B 186 NVADLLED-----R-LDEPADVTLLL--KTLPCLETQ------QRGSGWEVIDIVNSPNIVVT 234 (281)
T ss_dssp EECCTTTS-----C-CCSCCSEEEET--TCHHHHHHH------STTHHHHHHHHSSCSEEEEE
T ss_pred EEeeeccc-----C-CCCCcchHHHH--HHHHHhhhh------hhHHHHHHHHHhCCCCEEEe
Confidence 55432211 1 12334555555 467888653 23456799999999977654
No 79
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=78.57 E-value=15 Score=32.88 Aligned_cols=108 Identities=12% Similarity=0.195 Sum_probs=57.4
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-ceEEEEeccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-PFEFQDTAMTACEV 363 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~ev 363 (547)
-.|+|+|.|.|.- ...++.+. .-++||||.+.. .++.+.++ ++..|+ ..+|... +..++
T Consensus 46 ~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~~~------~~~~a~~~----~~~~~~~~v~~~~~--d~~~~ 105 (189)
T 3p9n_A 46 LAVLDLYAGSGAL----GLEALSRG----AASVLFVESDQR------SAAVIARN----IEALGLSGATLRRG--AVAAV 105 (189)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CSEEEEEECCHH------HHHHHHHH----HHHHTCSCEEEEES--CHHHH
T ss_pred CEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECCHH------HHHHHHHH----HHHcCCCceEEEEc--cHHHH
Confidence 4699999998843 12233342 348999997542 34444443 344455 3455432 22221
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHh---cCCcEEEEEecCCCC
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKS---LSPKVVTLVEQESKT 422 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~---L~PkvvtlvEqEan~ 422 (547)
.. .+.-..=++|+.|.++ |+.. ...+.+|..++. |+|.-++++|.+...
T Consensus 106 ~~-~~~~~~fD~i~~~~p~--~~~~-------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 106 VA-AGTTSPVDLVLADPPY--NVDS-------ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HH-HCCSSCCSEEEECCCT--TSCH-------HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred Hh-hccCCCccEEEECCCC--Ccch-------hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 10 0111222467777653 3321 224567777764 999988877765543
No 80
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=78.48 E-value=2.6 Score=41.04 Aligned_cols=111 Identities=18% Similarity=0.172 Sum_probs=60.0
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC----
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN---- 348 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g---- 348 (547)
..+++.+..... .|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.+++ ...+
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~ 132 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALELSTS------VLAAFRKRL----AEAPADVR 132 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEESCHH------HHHHHHHHH----HTSCHHHH
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEECCHH------HHHHHHHHH----hhcccccc
Confidence 344555544333 89999999997 44555655 2 47999997532 344444433 3334
Q ss_pred CceEEEEecccccccccccccccCCce-EEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 349 VPFEFQDTAMTACEVERQHLRVQPGEA-VVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 349 vpFeF~~V~~~~~ev~~~~L~i~~gEa-LaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
..++|..... .+ +.. ++.. +||.....+|++++ ..+..+|+.+ +.|+|.-.++++
T Consensus 133 ~~v~~~~~d~--~~-----~~~-~~~fD~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 133 DRCTLVQGDM--SA-----FAL-DKRFGTVVISSGSINELDE------ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp TTEEEEECBT--TB-----CCC-SCCEEEEEECHHHHTTSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEeCch--hc-----CCc-CCCcCEEEECCcccccCCH------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 3455544322 22 122 2322 34433445676642 2245666655 678998555443
No 81
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=78.08 E-value=8.2 Score=36.10 Aligned_cols=106 Identities=20% Similarity=0.202 Sum_probs=57.5
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEE
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF 353 (547)
.+++.+.....-+|+|+|.|.|.--..|.+.+ |..++||||.+.. .++...++ .-.++|
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~------~~~~a~~~--------~~~~~~ 82 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDD------MLEKAADR--------LPNTNF 82 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHH------HHHHHHHH--------STTSEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHH------HHHHHHHh--------CCCcEE
Confidence 45555544455689999999987655555544 2347999997531 23333322 222344
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
.... .. .+. .++..=+|-+...|||+++ ...+|+.+ +.|+|.-.+++
T Consensus 83 ~~~d--~~-----~~~-~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 83 GKAD--LA-----TWK-PAQKADLLYANAVFQWVPD--------HLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp EECC--TT-----TCC-CSSCEEEEEEESCGGGSTT--------HHHHHHHHGGGEEEEEEEEE
T ss_pred EECC--hh-----hcC-ccCCcCEEEEeCchhhCCC--------HHHHHHHHHHhcCCCeEEEE
Confidence 3321 11 122 1232323444567899864 34455555 78899854433
No 82
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=77.52 E-value=22 Score=34.26 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=24.2
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+.-.|+|+|.|.|.- +..||.+ | .++||||.+.
T Consensus 68 ~~~~vLD~GCG~G~~----~~~La~~--G---~~V~gvD~S~ 100 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIE----MKWFADR--G---HTVVGVEISE 100 (252)
T ss_dssp CSCEEEETTCTTCTH----HHHHHHT--T---CEEEEECSCH
T ss_pred CCCeEEEeCCCCcHH----HHHHHHC--C---CeEEEEECCH
Confidence 446899999998843 4567766 3 3899999764
No 83
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=77.42 E-value=16 Score=32.79 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=52.7
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-+|+|+|.|.|.-...++ +. ++ .++||||.+.. .++.+.+++. ..+..++|.... ..
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~~------~~~~a~~~~~----~~~~~~~~~~~d--~~-- 81 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISDL------QLKKAENFSR----ENNFKLNISKGD--IR-- 81 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCHH------HHHHHHHHHH----HHTCCCCEEECC--TT--
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCHH------HHHHHHHHHH----hcCCceEEEECc--hh--
Confidence 3479999998886444333 22 22 48999997542 3444444332 233344443322 11
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHH-HHHhcCCcEEEEE
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR-LVKSLSPKVVTLV 416 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~-~Vk~L~Pkvvtlv 416 (547)
.+...++..=+|-+...+||++. .+ ...+|+ ..+.|+|.-++++
T Consensus 82 ---~~~~~~~~fD~v~~~~~l~~~~~-----~~-~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 82 ---KLPFKDESMSFVYSYGTIFHMRK-----ND-VKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp ---SCCSCTTCEEEEEECSCGGGSCH-----HH-HHHHHHHHHHHEEEEEEEEE
T ss_pred ---hCCCCCCceeEEEEcChHHhCCH-----HH-HHHHHHHHHHHcCCCcEEEE
Confidence 12222333223334457888852 22 344554 4577899855444
No 84
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=76.73 E-value=20 Score=34.92 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=56.9
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHh----CCCceEEEEecc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAAS----CNVPFEFQDTAM 358 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s----~gvpFeF~~V~~ 358 (547)
+.-+|+|+|.|.|.- ...|+.++ ..++||||.+. ..++...+++...... ....++|.. .
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~------~~l~~a~~~~~~~~~~~~~~~~~~~~~~~--~ 97 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIAD------VSVKQCQQRYEDMKNRRDSEYIFSAEFIT--A 97 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCH------HHHHHHHHHHHHHHSSSCC-CCCEEEEEE--C
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCH------HHHHHHHHHHHHhhhcccccccceEEEEE--e
Confidence 556899999998873 33444432 35899999754 2455555555433210 111344433 2
Q ss_pred ccccccc-ccccccCCceEEEeecccccCC-CCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 359 TACEVER-QHLRVQPGEAVVVNFPFVLHHM-PDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 359 ~~~ev~~-~~L~i~~gEaLaVN~~~~LHhl-~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
+..++.. ..+.-.++..=+|-+.+.||++ .+ ......+|+.+ +.|+|.-++++
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-----~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYSFES-----YEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGS-----HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhccCC-----HHHHHHHHHHHHHHhCCCcEEEE
Confidence 2222210 0111112233334445688887 32 11234566655 67899855544
No 85
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=75.96 E-value=21 Score=32.09 Aligned_cols=44 Identities=30% Similarity=0.462 Sum_probs=33.3
Q ss_pred HHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 008984 271 ANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDS 323 (547)
Q Consensus 271 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~ 323 (547)
....|++.+.....-+|+|+|.|.|. +...|+.+ | .++||||.+
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s 83 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G---IEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T---CEEEEEESC
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C---CEEEEEcCC
Confidence 55678888876666899999999984 45667666 2 389999975
No 86
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=75.58 E-value=16 Score=36.54 Aligned_cols=112 Identities=16% Similarity=0.103 Sum_probs=57.2
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
.+|++...-.+.-+|+|+|.|.|. |...+|.+ | .-+++||+.+ . .++.+ .+.++..|++
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~~vD~s-~------~~~~a----~~~~~~~~~~~~ 88 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKH-G---AKHVIGVDMS-S------IIEMA----KELVELNGFSDK 88 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHT-C---CSEEEEEESS-T------HHHHH----HHHHHHTTCTTT
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHC-C---CCEEEEEChH-H------HHHHH----HHHHHHcCCCCC
Confidence 345444443344589999999985 33445554 2 2489999975 2 13333 3334455664
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTL 415 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtl 415 (547)
.+|.. .+..++.. ....=++|+.+.+ .+++..+. ..+.+|+.+ +-|+|.-+++
T Consensus 89 i~~~~--~d~~~~~~---~~~~~D~Ivs~~~--~~~l~~~~-----~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 89 ITLLR--GKLEDVHL---PFPKVDIIISEWM--GYFLLYES-----MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp EEEEE--SCTTTSCC---SSSCEEEEEECCC--BTTBSTTC-----CHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEE--CchhhccC---CCCcccEEEEeCc--hhhcccHH-----HHHHHHHHHHhhcCCCeEEE
Confidence 45433 23222211 1011133444432 23333221 245677665 7789986665
No 87
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=75.23 E-value=11 Score=34.74 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=22.9
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+.-+|+|+|.|.|.- ...||.+ | .++||||.+.
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~--g---~~V~gvD~S~ 54 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ--G---YHVVGAELSE 54 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH--C---CEEEEEEECH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC--C---CeEEEEeCCH
Confidence 345799999988843 3346655 2 3899999764
No 88
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=75.12 E-value=28 Score=32.13 Aligned_cols=99 Identities=16% Similarity=0.097 Sum_probs=52.8
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--ceEEEEecccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--PFEFQDTAMTACE 362 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pFeF~~V~~~~~e 362 (547)
-.|+|+|.|.|. +...|+. +..++||||.+.. .++.+.+++ +..+. .++|... +..+
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~v~~~~~--d~~~ 126 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISES------ALAKANETY----GSSPKAEYFSFVKE--DVFT 126 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCHH------HHHHHHHHH----TTSGGGGGEEEECC--CTTT
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCHH------HHHHHHHHh----hccCCCcceEEEEC--chhc
Confidence 489999999884 3335554 3468999997542 344444333 23222 2444332 2222
Q ss_pred cccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 363 VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
+.+ ++..=+|-+...|||++++ .+..+|+.+ +.|+|.-.+++
T Consensus 127 ~~~------~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 127 WRP------TELFDLIFDYVFFCAIEPE------MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CCC------SSCEEEEEEESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEE
T ss_pred CCC------CCCeeEEEEChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEE
Confidence 111 1122233345678888642 245666666 55899855443
No 89
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=74.96 E-value=16 Score=36.79 Aligned_cols=109 Identities=17% Similarity=0.118 Sum_probs=58.6
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--c
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--P 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--p 350 (547)
.+|.+.+.-.+.-.|+|+|.|.|. |...|+.+ | ..+++|||.+. .++.+.+ .++..|+ .
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s~-------~~~~a~~----~~~~~~~~~~ 114 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQSE-------ILYQAMD----IIRLNKLEDT 114 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESST-------HHHHHHH----HHHHTTCTTT
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChHH-------HHHHHHH----HHHHcCCCCc
Confidence 456665544445589999999984 34455555 2 25899999752 2444333 3344555 3
Q ss_pred eEEEEecccccccccccccccCC--ceEEEee-cccccCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 008984 351 FEFQDTAMTACEVERQHLRVQPG--EAVVVNF-PFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTL 415 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~g--EaLaVN~-~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtl 415 (547)
.+|.. .+..++ .+.++ ++|+.|. .+.|++.. ..+.+|+.+ +-|+|.-+++
T Consensus 115 i~~~~--~d~~~~-----~~~~~~~D~Ivs~~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 115 ITLIK--GKIEEV-----HLPVEKVDVIISEWMGYFLLFES--------MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEE--SCTTTS-----CCSCSCEEEEEECCCBTTBTTTC--------HHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEE--eeHHHh-----cCCCCcEEEEEEcCchhhccCHH--------HHHHHHHHHHhhcCCCcEEE
Confidence 44433 222222 12112 3455454 23344331 245677766 6789986655
No 90
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=74.69 E-value=22 Score=32.16 Aligned_cols=42 Identities=21% Similarity=0.400 Sum_probs=29.9
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDS 323 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~ 323 (547)
...|++.+. .+.-+|+|+|.|.|. +...|+.+ + .++||||.+
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~-~----~~~~~~D~~ 63 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN-G----TRVSGIEAF 63 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT-T----CEEEEEESS
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc-C----CeEEEEeCC
Confidence 345666665 455689999999883 45566766 2 589999975
No 91
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=74.33 E-value=31 Score=30.08 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=58.9
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP- 350 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp- 350 (547)
...|++.+.-.+.-+|+|+|.|.|. +...|+.+ ..++||||.+.. .++.+. +.++..+++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~~------~~~~a~----~~~~~~~~~~ 101 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINRR------AIKLAK----ENIKLNNLDN 101 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCHH------HHHHHH----HHHHHTTCTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCHH------HHHHHH----HHHHHcCCCc
Confidence 3456666654456689999999884 34455555 248999997532 233333 334455665
Q ss_pred --eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEEe
Q 008984 351 --FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLVE 417 (547)
Q Consensus 351 --FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~PkvvtlvE 417 (547)
++|..... .+. +.-..=++|+.|.+ +|+- ......+|+. .+.|+|.-++++.
T Consensus 102 ~~~~~~~~d~--~~~----~~~~~~D~v~~~~~--~~~~-------~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 102 YDIRVVHSDL--YEN----VKDRKYNKIITNPP--IRAG-------KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp SCEEEEECST--TTT----CTTSCEEEEEECCC--STTC-------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEECch--hcc----cccCCceEEEECCC--cccc-------hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 66654322 111 11111235555543 3431 1123445554 4678998555443
No 92
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=74.33 E-value=21 Score=36.00 Aligned_cols=113 Identities=16% Similarity=0.083 Sum_probs=60.5
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
.+|++...-.+.-.|+|+|.|.|. +...|+.+ +..+++|||.+. .++.+ .+.++..|++
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s~-------~l~~a----~~~~~~~~~~~~ 116 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECSS-------ISDYA----VKIVKANKLDHV 116 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECST-------HHHHH----HHHHHHTTCTTT
T ss_pred HHHHhccccCCCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcHH-------HHHHH----HHHHHHcCCCCc
Confidence 345444333334579999999984 44556665 246999999762 13333 3445566776
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
.+|... +.+++.. .-..=++|+.+++ .+++..+ ...+.+|+.+ |-|+|.-+++.
T Consensus 117 v~~~~~--d~~~~~~---~~~~fD~Iis~~~--~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 117 VTIIKG--KVEEVEL---PVEKVDIIISEWM--GYCLFYE-----SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EEEEES--CTTTCCC---SSSCEEEEEECCC--BBTBTBT-----CCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEC--cHHHccC---CCCceEEEEEccc--cccccCc-----hhHHHHHHHHHHhCCCCCEEcc
Confidence 566443 2222211 1011123444432 2333222 2256788777 77999977653
No 93
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=73.94 E-value=29 Score=30.02 Aligned_cols=101 Identities=10% Similarity=0.074 Sum_probs=54.2
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEE
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEF 353 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF 353 (547)
|++.+.-.+.-+|+|+|.|.|. +...|+. +..++||||.+.. .++.+. +.++..|++ ++|
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~------~~~~a~----~~~~~~~~~~~~~ 87 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDG------AIEVTK----QNLAKFNIKNCQI 87 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHH------HHHHHH----HHHHHTTCCSEEE
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHH------HHHHHH----HHHHHcCCCcEEE
Confidence 3344433344589999999987 3344444 3569999996532 233333 334455653 555
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEE
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTL 415 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtl 415 (547)
... +..+ . +.-..=+.|+.+.. .....+|+.++++ |.-.++
T Consensus 88 ~~~--d~~~-~---~~~~~~D~i~~~~~--------------~~~~~~l~~~~~~-~gG~l~ 128 (183)
T 2yxd_A 88 IKG--RAED-V---LDKLEFNKAFIGGT--------------KNIEKIIEILDKK-KINHIV 128 (183)
T ss_dssp EES--CHHH-H---GGGCCCSEEEECSC--------------SCHHHHHHHHHHT-TCCEEE
T ss_pred EEC--Cccc-c---ccCCCCcEEEECCc--------------ccHHHHHHHHhhC-CCCEEE
Confidence 332 2221 0 11012244555433 1246789999988 874443
No 94
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=73.86 E-value=47 Score=29.62 Aligned_cols=51 Identities=22% Similarity=0.226 Sum_probs=31.1
Q ss_pred EEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEE
Q 008984 286 HIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD 355 (547)
Q Consensus 286 HIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~ 355 (547)
.|+|+|.|.|. +...|+.+ | .++||||.+.. .++.+.+++ +..++.++|..
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~ 82 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G---YEVTAVDQSSV------GLAKAKQLA----QEKGVKITTVQ 82 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T---CEEEEECSSHH------HHHHHHHHH----HHHTCCEEEEC
T ss_pred CEEEECCCCCH----hHHHHHhC--C---CeEEEEECCHH------HHHHHHHHH----HhcCCceEEEE
Confidence 89999998875 34556655 2 38999997532 344444333 33355566543
No 95
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=72.86 E-value=5.6 Score=39.59 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=61.6
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
--.|+|+|.|.|. | +++-+ |..+++|+|-+. .+-+.+.+++...|+++.|........
T Consensus 106 p~~VLDlGCG~gp----L--al~~~----~~~~y~a~DId~----------~~i~~ar~~~~~~g~~~~~~v~D~~~~-- 163 (253)
T 3frh_A 106 PRRVLDIACGLNP----L--ALYER----GIASVWGCDIHQ----------GLGDVITPFAREKDWDFTFALQDVLCA-- 163 (253)
T ss_dssp CSEEEEETCTTTH----H--HHHHT----TCSEEEEEESBH----------HHHHHHHHHHHHTTCEEEEEECCTTTS--
T ss_pred CCeEEEecCCccH----H--HHHhc----cCCeEEEEeCCH----------HHHHHHHHHHHhcCCCceEEEeecccC--
Confidence 3489999998773 1 12222 678999999653 233445556777899998876533221
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
.+. .+.+++.++ ..+|||.++ .+...++.+..|+|.-|++.
T Consensus 164 ---~~~-~~~DvvLll--k~lh~LE~q------~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 164 ---PPA-EAGDLALIF--KLLPLLERE------QAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp ---CCC-CBCSEEEEE--SCHHHHHHH------STTHHHHHHHHCBCSEEEEE
T ss_pred ---CCC-CCcchHHHH--HHHHHhhhh------chhhHHHHHHHhcCCCEEEE
Confidence 112 245555555 356888543 23456788899999876654
No 96
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=71.40 E-value=5.4 Score=39.38 Aligned_cols=43 Identities=16% Similarity=-0.069 Sum_probs=29.4
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..|++.+.-...-+|+|+|.|.|. +...||.+ | -++||||.+.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~ 77 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQ 77 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCH
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCH
Confidence 345566654555689999999886 44556665 2 3899999764
No 97
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=71.28 E-value=10 Score=35.81 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=54.4
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-.|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++.+.+++. ..+|... +..+
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~~~~a~~~~~--------~~~~~~~--d~~~- 104 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--FG---TVEGLELSAD------MLAIARRRNP--------DAVLHHG--DMRD- 104 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESCHH------HHHHHHHHCT--------TSEEEEC--CTTT-
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECCHH------HHHHHHhhCC--------CCEEEEC--ChHH-
Confidence 3579999999984 45566665 32 8999997531 2333333221 2334322 1111
Q ss_pred ccccccccCCceEEEeecc-cccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 364 ERQHLRVQPGEAVVVNFPF-VLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~-~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
+.. ++..=+|-|.+ .|||+++. .....+|+.+ +.|+|.-+++++
T Consensus 105 ----~~~-~~~fD~v~~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 105 ----FSL-GRRFSAVTCMFSSIGHLAGQ-----AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ----CCC-SCCEEEEEECTTGGGGSCHH-----HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ----CCc-cCCcCEEEEcCchhhhcCCH-----HHHHHHHHHHHHhcCCCcEEEEE
Confidence 222 33333444555 88998641 1234555555 678999777775
No 98
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=71.00 E-value=18 Score=33.35 Aligned_cols=106 Identities=12% Similarity=0.116 Sum_probs=53.9
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEecccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTA 360 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 360 (547)
+.-+|+|+|.+.|.-=. .||.+- +|.-+||+|+.+.. .++.+.+ .++..|+. ++|..- +.
T Consensus 58 ~~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~------~~~~a~~----~~~~~~~~~~v~~~~~--d~ 119 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAV----RMARLL--QPGARLLTMEINPD------CAAITQQ----MLNFAGLQDKVTILNG--AS 119 (221)
T ss_dssp CCSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEESCHH------HHHHHHH----HHHHHTCGGGEEEEES--CH
T ss_pred CCCEEEEECCCCCHHHH----HHHHhC--CCCCEEEEEeCChH------HHHHHHH----HHHHcCCCCceEEEEC--CH
Confidence 34589999999886432 333321 23469999997532 2444433 34445654 555432 22
Q ss_pred ccccccccc----ccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 361 CEVERQHLR----VQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 361 ~ev~~~~L~----i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
.++ +..+. ..+=+.|.++.. .|+.. +...++..++-|+|.-+++++
T Consensus 120 ~~~-l~~~~~~~~~~~fD~V~~d~~--~~~~~--------~~~~~~~~~~~LkpgG~lv~~ 169 (221)
T 3u81_A 120 QDL-IPQLKKKYDVDTLDMVFLDHW--KDRYL--------PDTLLLEKCGLLRKGTVLLAD 169 (221)
T ss_dssp HHH-GGGTTTTSCCCCCSEEEECSC--GGGHH--------HHHHHHHHTTCCCTTCEEEES
T ss_pred HHH-HHHHHHhcCCCceEEEEEcCC--cccch--------HHHHHHHhccccCCCeEEEEe
Confidence 221 01111 112235555432 22221 122456656899999887775
No 99
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=70.02 E-value=15 Score=39.39 Aligned_cols=118 Identities=8% Similarity=0.029 Sum_probs=63.3
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHH---HHHHhCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLS---EFAASCNV 349 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~---~fA~s~gv 349 (547)
..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+-+.. .++.+.+++. +.++..|+
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS~~------~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKADI------PAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECCHH------HHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCCHH------HHHHHHHHHHHHHHHHHHhCC
Confidence 445565554445579999998885 2233343332 238999997542 2333333333 33556676
Q ss_pred ---ceEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 350 ---PFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 350 ---pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
.++|. ..+..++.... .+..-.+|++|..+ + . .+.+..|..+.+.|+|.-.+++
T Consensus 230 ~~~rVefi--~GD~~~lp~~d-~~~~aDVVf~Nn~~--F-~-------pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 230 KHAEYTLE--RGDFLSEEWRE-RIANTSVIFVNNFA--F-G-------PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCCEEEEE--ECCTTSHHHHH-HHHTCSEEEECCTT--C-C-------HHHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCeEEE--ECcccCCcccc-ccCCccEEEEcccc--c-C-------chHHHHHHHHHHcCCCCcEEEE
Confidence 34443 33332222111 11233567778643 2 1 2446677778899999854433
No 100
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=68.49 E-value=11 Score=40.20 Aligned_cols=113 Identities=14% Similarity=0.064 Sum_probs=63.0
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-- 350 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-- 350 (547)
.+|++.+...+.-+|+|+|.|.|. +...||.+ +..++||||.+. .+ +...+.++..|+.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s~-------~l----~~A~~~~~~~gl~~~ 208 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAST-------MA----QHAEVLVKSNNLTDR 208 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECHH-------HH----HHHHHHHHHTTCTTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcHH-------HH----HHHHHHHHHcCCCCc
Confidence 467777655555689999999886 44456654 245999999642 12 2334445566764
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
++|..- +..++.. . ..=++|+.| ..++|+.++ ...+.+....+-|+|.-+++.+
T Consensus 209 v~~~~~--d~~~~~~---~-~~fD~Ivs~--~~~~~~~~e-----~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 209 IVVIPG--KVEEVSL---P-EQVDIIISE--PMGYMLFNE-----RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EEEEES--CTTTCCC---S-SCEEEEECC--CCHHHHTCH-----HHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEEC--chhhCcc---C-CCeEEEEEe--CchHhcCcH-----HHHHHHHHHHHhcCCCCEEEEE
Confidence 555432 2222211 1 111233333 334555442 2345555566889999776643
No 101
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=65.91 E-value=9.1 Score=41.55 Aligned_cols=83 Identities=27% Similarity=0.356 Sum_probs=50.0
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC-CceEEEEeccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN-VPFEFQDTAMTAC 361 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpFeF~~V~~~~~ 361 (547)
+-+.|+|.|.|.|. |-..||++ | -++||||.+.. .++.. ...|+.-| +..+|..... +
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~--g---a~V~giD~~~~------~i~~a----~~~a~~~~~~~~~~~~~~~--~ 124 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK--G---ATIVGIDFQQE------NINVC----RALAEENPDFAAEFRVGRI--E 124 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHHHH----HHHHHTSTTSEEEEEECCH--H
T ss_pred CCCeEEEECCCCcH----HHHHHHhC--C---CEEEEECCCHH------HHHHH----HHHHHhcCCCceEEEECCH--H
Confidence 34789999999985 66778876 3 27999997642 23332 23455555 6777765433 2
Q ss_pred ccccccccccCCceEEEeecccccCCCC
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPD 389 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~d 389 (547)
++.. ...++..=||-|+-.|||++|
T Consensus 125 ~~~~---~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 125 EVIA---ALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHHH---HCCTTSCSEEEEESCHHHHHH
T ss_pred HHhh---hccCCCccEEEECcchhcCCC
Confidence 2100 112333335666778999976
No 102
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=65.86 E-value=50 Score=29.40 Aligned_cols=109 Identities=19% Similarity=0.221 Sum_probs=52.2
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC--ceEEEEecccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV--PFEFQDTAMTACE 362 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv--pFeF~~V~~~~~e 362 (547)
-.|+|+|.|.|.- ...|+.+-+ |.-++||||.+.. .++.+.+ .++..|+ .++|... +..+
T Consensus 24 ~~vLDlGcG~G~~----~~~l~~~~~--~~~~v~~vD~s~~------~~~~a~~----~~~~~~~~~~v~~~~~--d~~~ 85 (197)
T 3eey_A 24 DTVVDATCGNGND----TAFLASLVG--ENGRVFGFDIQDK------AIANTTK----KLTDLNLIDRVTLIKD--GHQN 85 (197)
T ss_dssp CEEEESCCTTSHH----HHHHHHHHC--TTCEEEEECSCHH------HHHHHHH----HHHHTTCGGGEEEECS--CGGG
T ss_pred CEEEEcCCCCCHH----HHHHHHHhC--CCCEEEEEECCHH------HHHHHHH----HHHHcCCCCCeEEEEC--CHHH
Confidence 3799999999842 333444311 2239999997532 2444433 3455566 3555432 3222
Q ss_pred cccccccccCCceEEEeecccccCCCCCCcc--ccchHHHHHHHHHhcCCcEEEE
Q 008984 363 VERQHLRVQPGEAVVVNFPFVLHHMPDESVS--TENHRDRLLRLVKSLSPKVVTL 415 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~~LHhl~desvs--~~n~rd~~L~~Vk~L~Pkvvtl 415 (547)
+.. .+. ..=++|+.|.++ +.+ .+..+. .......+-...+.|+|.-.++
T Consensus 86 ~~~-~~~-~~fD~v~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~ 136 (197)
T 3eey_A 86 MDK-YID-CPVKAVMFNLGY-LPS-GDHSISTRPETTIQALSKAMELLVTGGIIT 136 (197)
T ss_dssp GGG-TCC-SCEEEEEEEESB-CTT-SCTTCBCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred Hhh-hcc-CCceEEEEcCCc-ccC-cccccccCcccHHHHHHHHHHhCcCCCEEE
Confidence 210 111 122466667655 111 111111 1122344444557789984443
No 103
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=65.65 E-value=78 Score=28.76 Aligned_cols=99 Identities=18% Similarity=0.211 Sum_probs=52.1
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE 362 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 362 (547)
+.-.|+|+|.|.|.--. .|+.+ ++ ++||||.+.. .++...+++ -.++|.... ..+
T Consensus 40 ~~~~vLdiG~G~G~~~~----~l~~~--~~---~v~~~D~s~~------~~~~a~~~~--------~~~~~~~~d--~~~ 94 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLE----HFTKE--FG---DTAGLELSED------MLTHARKRL--------PDATLHQGD--MRD 94 (239)
T ss_dssp TCCEEEEETCTTSHHHH----HHHHH--HS---EEEEEESCHH------HHHHHHHHC--------TTCEEEECC--TTT
T ss_pred CCCeEEEecccCCHHHH----HHHHh--CC---cEEEEeCCHH------HHHHHHHhC--------CCCEEEECC--HHH
Confidence 44689999999986433 33333 22 8999997531 233332221 123443321 111
Q ss_pred cccccccccCCc-eEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 363 VERQHLRVQPGE-AVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 363 v~~~~L~i~~gE-aLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
+.. ++. -+||...-.+||+++. .....+|+.+ +.|+|.-.++++
T Consensus 95 -----~~~-~~~~D~v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 95 -----FRL-GRKFSAVVSMFSSVGYLKTT-----EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp -----CCC-SSCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred -----ccc-CCCCcEEEEcCchHhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 122 222 2444333378888641 2234555555 678999777664
No 104
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=65.49 E-value=62 Score=27.92 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=30.5
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..+++.+.-...-+|+|+|.|.|. +...|+.+. |..++||||.+.
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~ 59 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGS----IAIEWLRST---PQTTAVCFEISE 59 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTH----HHHHHHTTS---SSEEEEEECSCH
T ss_pred HHHHHHhcccCCCeEEEeCCCCCH----HHHHHHHHC---CCCeEEEEeCCH
Confidence 344555554556689999998873 444555553 568999999754
No 105
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=64.76 E-value=51 Score=30.52 Aligned_cols=105 Identities=16% Similarity=0.181 Sum_probs=55.0
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhC-CCceEEEEeccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC-NVPFEFQDTAMTAC 361 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-gvpFeF~~V~~~~~ 361 (547)
+.-.|+|+|.|.|. +...|+.+- ..++||||.+.. .++.+.+++ +.. +...+|... +..
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~~~--d~~ 138 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITED------FLVQAKTYL----GEEGKRVRNYFCC--GLQ 138 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHH------HHHHHHHHT----GGGGGGEEEEEEC--CGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHH------HHHHHHHHh----hhcCCceEEEEEc--Chh
Confidence 35689999998885 344555543 248999997532 244443332 222 223444432 222
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVEQ 418 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvEq 418 (547)
+ +....+..=+|-+...|||+++. .+..+|+.+ +.|+|.-++ +++.
T Consensus 139 ~-----~~~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 139 D-----FTPEPDSYDVIWIQWVIGHLTDQ------HLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp G-----CCCCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred h-----cCCCCCCEEEEEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEEc
Confidence 2 22223322233344678998752 234555554 678998444 4443
No 106
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=64.11 E-value=34 Score=33.13 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=51.6
Q ss_pred EEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccccc
Q 008984 286 HIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVER 365 (547)
Q Consensus 286 HIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 365 (547)
.|+|+|.|.|. +...|+.+ | -++||||.+.. .+ +.|+.. -.++|... + .
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~--~---~~v~gvD~s~~------ml--------~~a~~~-~~v~~~~~--~-----~ 90 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF--F---ERVHAVDPGEA------QI--------RQALRH-PRVTYAVA--P-----A 90 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT--C---SEEEEEESCHH------HH--------HTCCCC-TTEEEEEC--C-----T
T ss_pred CEEEEcCCCCH----HHHHHHHh--C---CEEEEEeCcHH------hh--------hhhhhc-CCceeehh--h-----h
Confidence 58999999984 34556655 2 37999997531 11 223322 12344322 2 2
Q ss_pred ccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEE-EEec
Q 008984 366 QHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVT-LVEQ 418 (547)
Q Consensus 366 ~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvt-lvEq 418 (547)
+.+.+.++..=+|-|...||++. .+.+|+.+ |-|+|.-++ ++..
T Consensus 91 e~~~~~~~sfD~v~~~~~~h~~~---------~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 91 EDTGLPPASVDVAIAAQAMHWFD---------LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp TCCCCCSSCEEEEEECSCCTTCC---------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcccCCcccEEEEeeehhHhh---------HHHHHHHHHHHcCCCCEEEEEEC
Confidence 33444455554555667788873 23455444 678998544 5543
No 107
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=63.11 E-value=20 Score=32.32 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=23.4
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+++.+.. +.-.|+|+|.|.|. +...| +. -++||||.+.
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s~ 66 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPSE 66 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCCH
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCCH
Confidence 4444433 45589999999885 22333 11 2899998653
No 108
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=63.10 E-value=30 Score=32.45 Aligned_cols=112 Identities=18% Similarity=0.166 Sum_probs=56.6
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEEEeccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQDTAMTAC 361 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ 361 (547)
+.-.|+|+|.|.|.-.. .||.+. |..+++||+.+.. .++.+. +-++..|++ ++|.. .+..
T Consensus 34 ~~~~vLDiGcG~G~~~~----~lA~~~---p~~~v~giD~s~~------~l~~a~----~~~~~~~l~nv~~~~--~Da~ 94 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLV----AMAKDR---PEQDFLGIEVHSP------GVGACL----ASAHEEGLSNLRVMC--HDAV 94 (218)
T ss_dssp CCCEEEEESCTTCHHHH----HHHHHC---TTSEEEEECSCHH------HHHHHH----HHHHHTTCSSEEEEC--SCHH
T ss_pred CCCeEEEEeeeChHHHH----HHHHHC---CCCeEEEEEecHH------HHHHHH----HHHHHhCCCcEEEEE--CCHH
Confidence 44579999999986443 344332 4578999997542 243333 345556664 55532 2222
Q ss_pred ccccccccccCC--ceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 362 EVERQHLRVQPG--EAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 362 ev~~~~L~i~~g--EaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
++-... +.++ +.|.+|++.-.++.....-... ...+|+.+ +.|+|.-++++.
T Consensus 95 ~~l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~--~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 95 EVLHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIV--QVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp HHHHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSC--SHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHH--cCCCChheEEEeCCCCccchhhhhhhhh--hHHHHHHHHHHcCCCcEEEEE
Confidence 210011 1222 3566665443332211000000 12477776 559999777664
No 109
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=62.78 E-value=32 Score=33.26 Aligned_cols=110 Identities=21% Similarity=0.204 Sum_probs=60.3
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC-Cce
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN-VPF 351 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpF 351 (547)
..|++++.-...-+|+|+|.|.|. |...|+.++ .-++|||+.+. ++.+.|+..+ -.+
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~--------------~~~~~~~~~~~~~v 78 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDR--------------EMVENLKSIGDERL 78 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCH--------------HHHHHHTTSCCTTE
T ss_pred HHHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCH--------------HHHHHHHhccCCCe
Confidence 345566554455689999998875 667787772 35899998653 3344444431 123
Q ss_pred EEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhc--CCcEEEEEecCC
Q 008984 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSL--SPKVVTLVEQES 420 (547)
Q Consensus 352 eF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L--~PkvvtlvEqEa 420 (547)
+| +..+..+++...+. ..-.|+-|.++.. + -+.+.+.+... -+..+++++.|.
T Consensus 79 ~~--i~~D~~~~~~~~~~--~~~~vv~NlPy~i--------~----~~il~~ll~~~~~~~~~~~m~Qkev 133 (249)
T 3ftd_A 79 EV--INEDASKFPFCSLG--KELKVVGNLPYNV--------A----SLIIENTVYNKDCVPLAVFMVQKEV 133 (249)
T ss_dssp EE--ECSCTTTCCGGGSC--SSEEEEEECCTTT--------H----HHHHHHHHHTGGGCSEEEEEEEHHH
T ss_pred EE--EEcchhhCChhHcc--CCcEEEEECchhc--------c----HHHHHHHHhcCCCCceEEEEEeHHH
Confidence 33 33333333332221 1225777776631 1 23455555543 466777777663
No 110
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=61.53 E-value=84 Score=27.54 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=31.1
Q ss_pred EEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-ceEEEE
Q 008984 286 HIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-PFEFQD 355 (547)
Q Consensus 286 HIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~ 355 (547)
+|+|+|.|.|.- ...||.+ ..++||||.+.. .++.+.+++. ..|+ ..+|..
T Consensus 25 ~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s~~------~l~~a~~~~~----~~~~~~v~~~~ 76 (185)
T 3mti_A 25 IVVDATMGNGND----TAFLAGL-----SKKVYAFDVQEQ------ALGKTSQRLS----DLGIENTELIL 76 (185)
T ss_dssp EEEESCCTTSHH----HHHHHTT-----SSEEEEEESCHH------HHHHHHHHHH----HHTCCCEEEEE
T ss_pred EEEEEcCCCCHH----HHHHHHh-----CCEEEEEECCHH------HHHHHHHHHH----HcCCCcEEEEe
Confidence 689999998863 3346665 258999997542 3555544443 3454 355544
No 111
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=61.23 E-value=55 Score=29.35 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=41.9
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
.-+|+|+|.|.|. +...|+.+ |+ -++||||.+.. .++.+. +-++..|+..+|.. .+..++
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~~~------~~~~a~----~~~~~~~~~~~~~~--~d~~~~ 109 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVDKE------AVDVLI----ENLGEFKGKFKVFI--GDVSEF 109 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHH------HHHHHH----HHTGGGTTSEEEEE--SCGGGC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECCHH------HHHHHH----HHHHHcCCCEEEEE--CchHHc
Confidence 3479999999987 34455555 22 28999997532 233333 33444566555543 222222
Q ss_pred ccccccccCCceEEEeeccc
Q 008984 364 ERQHLRVQPGEAVVVNFPFV 383 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~ 383 (547)
. ..=++|+.|.++.
T Consensus 110 ~------~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 110 N------SRVDIVIMNPPFG 123 (207)
T ss_dssp C------CCCSEEEECCCCS
T ss_pred C------CCCCEEEEcCCCc
Confidence 1 1235788887763
No 112
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=60.59 E-value=6.6 Score=38.44 Aligned_cols=43 Identities=21% Similarity=0.250 Sum_probs=27.4
Q ss_pred HHHhhhcc--ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 275 IGEAVENE--HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 275 ILEA~~ge--~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+++.+..+ ..-.|+|+|.+.|. +...||.+-+ ..+|||||.+.
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G~----~~~~la~~~~---~~~v~gvDis~ 80 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVGH----LTLSIACKWG---PSRMVGLDIDS 80 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTCH----HHHHHHHHTC---CSEEEEEESCH
T ss_pred HHHhhhhhhcCCCcEEEeCCCCCH----HHHHHHHHcC---CCEEEEECCCH
Confidence 44454433 44589999999983 3444555432 24999999754
No 113
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=59.83 E-value=40 Score=35.01 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=52.5
Q ss_pred EEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccccc
Q 008984 286 HIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVER 365 (547)
Q Consensus 286 HIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~ 365 (547)
+|+|+|.|.| +-++ +|.|.|. -|++||+.+. .++ ...+.++.-|+.=....+..+.+++++
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s~-------~~~----~a~~~~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEASA-------IWQ----QAREVVRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECST-------THH----HHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeChH-------HHH----HHHHHHHHcCCCceEEEEeeeeeeecC
Confidence 5888888777 3344 4555543 2789998642 122 223455666765444445555555432
Q ss_pred ccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEE
Q 008984 366 QHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTL 415 (547)
Q Consensus 366 ~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtl 415 (547)
. ..+=+|-+...-+.+..|+ ..+.+|... |-|+|.-+++
T Consensus 147 p------e~~DvivsE~~~~~l~~e~-----~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 P------EQVDAIVSEWMGYGLLHES-----MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp S------SCEEEEECCCCBTTBTTTC-----SHHHHHHHHHHHEEEEEEEE
T ss_pred C------ccccEEEeecccccccccc-----hhhhHHHHHHhhCCCCceEC
Confidence 1 1122222322234444443 356777776 6678875543
No 114
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=57.35 E-value=1.2e+02 Score=28.54 Aligned_cols=107 Identities=15% Similarity=0.131 Sum_probs=53.3
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACE 362 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~e 362 (547)
+.-.|+|+|.|.|.--.. |+.++ ..++||||.+.. .++.+.+ -++..+++-..+.+..+..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~------~~~~a~~----~~~~~~~~~~v~~~~~d~~~ 125 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEV------SINDARV----RARNMKRRFKVFFRAQDSYG 125 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHH------HHHHHHH----HHHTSCCSSEEEEEESCTTT
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHH------HHHHHHH----HHHhcCCCccEEEEECCccc
Confidence 345899999999854332 44432 348999997542 2444433 33445553233333333222
Q ss_pred cccccccc-cCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEE
Q 008984 363 VERQHLRV-QPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLV 416 (547)
Q Consensus 363 v~~~~L~i-~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~Pkvvtlv 416 (547)
. .. .++..=+|-+...|||+.. ...+ ...+|+. .+.|+|.-.+++
T Consensus 126 ~-----~~~~~~~fD~v~~~~~l~~~~~---~~~~-~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 126 R-----HMDLGKEFDVISSQFSFHYAFS---TSES-LDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp S-----CCCCSSCEEEEEEESCGGGGGS---SHHH-HHHHHHHHHHTEEEEEEEEE
T ss_pred c-----ccCCCCCcCEEEECchhhhhcC---CHHH-HHHHHHHHHHhcCCCCEEEE
Confidence 2 11 1232223334456787421 1123 3445554 477899855544
No 115
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=56.13 E-value=1.1e+02 Score=27.36 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=53.8
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEE
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEF 353 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF 353 (547)
+++.+.-.+.-+|+|+|.|.|..-. .|+.+ + -++|||+.+.. .++.+.++ ++..|++ .+|
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~----~la~~-~----~~v~~vD~~~~------~~~~a~~~----~~~~~~~~v~~ 129 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTA----ILAHL-V----QHVCSVERIKG------LQWQARRR----LKNLDLHNVST 129 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHH----HHHHH-S----SEEEEEESCHH------HHHHHHHH----HHHTTCCSEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHH----HHHHh-C----CEEEEEecCHH------HHHHHHHH----HHHcCCCceEE
Confidence 4555554555689999999886433 33333 2 48999997532 24444443 3445664 444
Q ss_pred EEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEE
Q 008984 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTL 415 (547)
Q Consensus 354 ~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtl 415 (547)
... +..+.... -.+=+.|+++ ..+||+++ ...+.|+|.-.++
T Consensus 130 ~~~--d~~~~~~~---~~~~D~i~~~--~~~~~~~~-------------~~~~~L~pgG~lv 171 (210)
T 3lbf_A 130 RHG--DGWQGWQA---RAPFDAIIVT--AAPPEIPT-------------ALMTQLDEGGILV 171 (210)
T ss_dssp EES--CGGGCCGG---GCCEEEEEES--SBCSSCCT-------------HHHHTEEEEEEEE
T ss_pred EEC--CcccCCcc---CCCccEEEEc--cchhhhhH-------------HHHHhcccCcEEE
Confidence 332 22211110 0111344444 46688864 2467788874443
No 116
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=55.37 E-value=92 Score=29.20 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=23.6
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..-.|+|+|.|.|. +...|+.+ + .++||||.+.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~ 86 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPSK 86 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCCH
Confidence 44589999999886 34456655 2 3899999753
No 117
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=55.26 E-value=35 Score=29.88 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=55.3
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEecccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTACE 362 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~e 362 (547)
-.|+|+|.|.|.- ...|+.++ .-++||||.+.. .++. ..+.++..|++ ++|.. .+..+
T Consensus 33 ~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~~~------~~~~----a~~~~~~~~~~~~~~~~~--~d~~~ 92 (177)
T 2esr_A 33 GRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKNRK------AQAI----IQDNIIMTKAENRFTLLK--MEAER 92 (177)
T ss_dssp CEEEEETCTTCHH----HHHHHHTT----CCEEEEECCCHH------HHHH----HHHHHHTTTCGGGEEEEC--SCHHH
T ss_pred CeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECCHH------HHHH----HHHHHHHcCCCCceEEEE--CcHHH
Confidence 4799999998853 33455552 358999997532 2333 33445566765 55543 22222
Q ss_pred cccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH---HhcCCcEEEEEecCCC
Q 008984 363 VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV---KSLSPKVVTLVEQESK 421 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V---k~L~PkvvtlvEqEan 421 (547)
... .+. ..=++|+.|.++.. .....+++.+ +-|+|.-+++++....
T Consensus 93 ~~~-~~~-~~fD~i~~~~~~~~-----------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 93 AID-CLT-GRFDLVFLDPPYAK-----------ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHH-HBC-SCEEEEEECCSSHH-----------HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hHH-hhc-CCCCEEEECCCCCc-----------chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 100 000 11145666655421 1234556666 6789997776664443
No 118
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=55.13 E-value=15 Score=34.19 Aligned_cols=104 Identities=23% Similarity=0.296 Sum_probs=52.1
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVE 364 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~ 364 (547)
-.|+|+|.|.|. +...|+.+ ++ ++||||.+.. .++...+++ . .-..+|..... .++.
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~------~~~~a~~~~----~--~~~~~~~~~d~--~~~~ 114 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKS------ALEIAAKEN----T--AANISYRLLDG--LVPE 114 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHH------HHHHHHHHS----C--CTTEEEEECCT--TCHH
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHH------HHHHHHHhC----c--ccCceEEECcc--cccc
Confidence 458999999884 34445543 22 8999997532 233333322 1 11344543322 2211
Q ss_pred cccccccCCc-eEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcE-EEEEec
Q 008984 365 RQHLRVQPGE-AVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKV-VTLVEQ 418 (547)
Q Consensus 365 ~~~L~i~~gE-aLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkv-vtlvEq 418 (547)
.. .....+. .-+|-+...+||++++ + +..+|+.+ +.|+|.- ++++|-
T Consensus 115 ~~-~~~~~~~~~d~v~~~~~~~~~~~~-----~-~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 115 QA-AQIHSEIGDANIYMRTGFHHIPVE-----K-RELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HH-HHHHHHHCSCEEEEESSSTTSCGG-----G-HHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cc-cccccccCccEEEEcchhhcCCHH-----H-HHHHHHHHHHHcCCCCEEEEEeC
Confidence 10 0010001 2344455678888642 2 34555544 6789974 456654
No 119
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=55.04 E-value=65 Score=30.78 Aligned_cols=112 Identities=17% Similarity=0.235 Sum_probs=57.3
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEEEeccccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQDTAMTAC 361 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~~ 361 (547)
+..+|+|+|.|.|.-=. .|+.+. |..++||||.+.. .++.+.++ ++..|++ ++|.. .+..
T Consensus 109 ~~~~vLDlG~GsG~~~~----~la~~~---~~~~v~~vD~s~~------~l~~a~~n----~~~~~~~~v~~~~--~d~~ 169 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIAL----ALASER---PDCEIIAVDRMPD------AVSLAQRN----AQHLAIKNIHILQ--SDWF 169 (276)
T ss_dssp SCCEEEEETCTTSHHHH----HHHHHC---TTSEEEEECSSHH------HHHHHHHH----HHHHTCCSEEEEC--CSTT
T ss_pred CCCEEEEecCCccHHHH----HHHHhC---CCCEEEEEECCHH------HHHHHHHH----HHHcCCCceEEEE--cchh
Confidence 34589999999886433 333221 3469999997542 34444443 3445665 55533 2222
Q ss_pred ccccccccccCCceEEEeeccc-----------ccCCCCCCccc-c---chHHHHHHH-HHhcCCcEEEEEe
Q 008984 362 EVERQHLRVQPGEAVVVNFPFV-----------LHHMPDESVST-E---NHRDRLLRL-VKSLSPKVVTLVE 417 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~-----------LHhl~desvs~-~---n~rd~~L~~-Vk~L~PkvvtlvE 417 (547)
+. +.-..=+.|+.|.++. ++|-|...... . .....+++. .+-|+|.-++++|
T Consensus 170 ~~----~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 170 SA----LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GG----GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hh----cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 21 1111225677775542 23333322110 0 122445554 4678998777776
No 120
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=54.62 E-value=22 Score=34.19 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=27.4
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHH
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRL 340 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL 340 (547)
+.-.|+|+|.|.|. +..|+ .+.+ .-+|||||.+. ..++.+.+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~----~~~~---~~~v~gvD~s~------~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLS----ACSH---FEDITMTDFLE------VNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTT----GGGG---CSEEEEECSCH------HHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHh----hccC---CCeEEEeCCCH------HHHHHHHHHH
Confidence 44589999999998 54332 2211 23899999754 2355555544
No 121
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=54.44 E-value=1.4e+02 Score=28.96 Aligned_cols=113 Identities=19% Similarity=0.226 Sum_probs=59.0
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEecccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTACE 362 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~e 362 (547)
-.|+|+|.|.|.--. .|+.+ |..++||||.+.. .++.+.+ -++..|+. ++|..- +..+
T Consensus 125 ~~vLDlG~GsG~~~~----~la~~----~~~~v~~vDis~~------al~~A~~----n~~~~~l~~~v~~~~~--D~~~ 184 (284)
T 1nv8_A 125 KTVADIGTGSGAIGV----SVAKF----SDAIVFATDVSSK------AVEIARK----NAERHGVSDRFFVRKG--EFLE 184 (284)
T ss_dssp CEEEEESCTTSHHHH----HHHHH----SSCEEEEEESCHH------HHHHHHH----HHHHTTCTTSEEEEES--STTG
T ss_pred CEEEEEeCchhHHHH----HHHHC----CCCEEEEEECCHH------HHHHHHH----HHHHcCCCCceEEEEC--cchh
Confidence 479999999995433 44444 3579999997542 3444443 34556775 666543 2222
Q ss_pred cccccccccCCceEEEeeccccc--CCCCCCc--------cccchHHHHHHHH-HhcCCcEEEEEecC
Q 008984 363 VERQHLRVQPGEAVVVNFPFVLH--HMPDESV--------STENHRDRLLRLV-KSLSPKVVTLVEQE 419 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~~LH--hl~desv--------s~~n~rd~~L~~V-k~L~PkvvtlvEqE 419 (547)
.-...+ .+-+.|+.|-++.-. ++..+-. ...+..+-+-+.+ +.|+|.-++++|-.
T Consensus 185 ~~~~~f--~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 185 PFKEKF--ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GGGGGT--TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred hccccc--CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 111111 111678888554311 1211110 0011224444555 67889877777743
No 122
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=53.52 E-value=48 Score=29.78 Aligned_cols=69 Identities=17% Similarity=0.113 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhh--ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHh
Q 008984 269 MSANVVIGEAVE--NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAAS 346 (547)
Q Consensus 269 ~tANqAILEA~~--ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s 346 (547)
......+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++||||.+.. .++.+ .+.++.
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s~~------~~~~a----~~~~~~ 105 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDISDE------SMTAA----EENAAL 105 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESCHH------HHHHH----HHHHHH
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECCHH------HHHHH----HHHHHH
Confidence 334455666655 2345689999999984 33346655 2358999997532 23333 334455
Q ss_pred CCCc-eEEEE
Q 008984 347 CNVP-FEFQD 355 (547)
Q Consensus 347 ~gvp-FeF~~ 355 (547)
.|++ ++|..
T Consensus 106 ~~~~~v~~~~ 115 (205)
T 3grz_A 106 NGIYDIALQK 115 (205)
T ss_dssp TTCCCCEEEE
T ss_pred cCCCceEEEe
Confidence 6665 56544
No 123
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=53.36 E-value=27 Score=32.30 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=23.4
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
-+|+|+|.|.|. +...|+.+ | .++||||.+.
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~ 80 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ--A---ARWAAYDFSP 80 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG--S---SEEEEEESCH
T ss_pred CeEEEeCCCCCH----HHHHHHHc--C---CEEEEEECCH
Confidence 479999999986 55566666 2 3899999753
No 124
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=51.48 E-value=1.4e+02 Score=27.15 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=38.8
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--e
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--F 351 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--F 351 (547)
.+++.+.-...-.|+|+|.|.|. +...||.+ + .++||||.+.. .++.+ .+-++..|++ +
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~------~~~~a----~~~~~~~g~~~~v 106 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRAD------RIENI----QKNIDTYGLSPRM 106 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHH----HHHHHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHH------HHHHH----HHHHHHcCCCCCE
Confidence 45555554445579999998875 33455655 2 48999997532 23333 3445667887 6
Q ss_pred EEEE
Q 008984 352 EFQD 355 (547)
Q Consensus 352 eF~~ 355 (547)
+|..
T Consensus 107 ~~~~ 110 (204)
T 3njr_A 107 RAVQ 110 (204)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6644
No 125
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=51.23 E-value=44 Score=34.29 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=62.4
Q ss_pred HHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-
Q 008984 271 ANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV- 349 (547)
Q Consensus 271 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv- 349 (547)
....+++.+.....-+|+|+|.|.|.- ...|+.+. |..++||||.+.. .++.+.+++ +..|+
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~----s~~la~~~---p~~~V~gvD~s~~------al~~Ar~n~----~~ngl~ 272 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVI----GLTLLDKN---PQAKVVFVDESPM------AVASSRLNV----ETNMPE 272 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHH----HHHHHHHC---TTCEEEEEESCHH------HHHHHHHHH----HHHCGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHH----HHHHHHHC---CCCEEEEEECcHH------HHHHHHHHH----HHcCCC
Confidence 345678888766667899999999953 33444442 4569999997532 344444443 33444
Q ss_pred ---ceEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 350 ---PFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 350 ---pFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
.++|..-... + .+.-..=++|+.|-+| |+...- . ......+++.+ +.|+|.-.+++
T Consensus 273 ~~~~v~~~~~D~~--~----~~~~~~fD~Ii~nppf--h~~~~~--~-~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 273 ALDRCEFMINNAL--S----GVEPFRFNAVLCNPPF--HQQHAL--T-DNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp GGGGEEEEECSTT--T----TCCTTCEEEEEECCCC------------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCceEEEEechhh--c----cCCCCCeeEEEECCCc--ccCccc--C-HHHHHHHHHHHHHhCCCCcEEEE
Confidence 3566543221 1 1111112467777665 432111 0 11233566665 56899855544
No 126
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=50.35 E-value=48 Score=30.24 Aligned_cols=102 Identities=19% Similarity=0.155 Sum_probs=53.3
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-ceEEEEeccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-PFEFQDTAMTACEV 363 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~ev 363 (547)
-+|+|+|.|.|.--..+ +.+ |. -+|||||.+.. .++.+.+ -++..|+ ..+|.. .+..+.
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~--~~--~~V~~vD~s~~------~l~~a~~----~~~~~~~~~v~~~~--~D~~~~ 115 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSR--YA--AGATLIEMDRA------VSQQLIK----NLATLKAGNARVVN--SNAMSF 115 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHT--TC--SEEEEECSCHH------HHHHHHH----HHHHTTCCSEEEEC--SCHHHH
T ss_pred CeEEEeCCCcCHHHHHH----Hhc--CC--CEEEEEECCHH------HHHHHHH----HHHHcCCCcEEEEE--CCHHHH
Confidence 47999999888643322 233 21 28999997542 2444433 3445566 455543 222221
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHh---cCCcEEEEEecC
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKS---LSPKVVTLVEQE 419 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~---L~PkvvtlvEqE 419 (547)
... .-..=++|++|.+| | .. ....+|+.++. |+|.-+++++..
T Consensus 116 ~~~--~~~~fD~V~~~~p~--~-~~--------~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 116 LAQ--KGTPHNIVFVDPPF--R-RG--------LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HSS--CCCCEEEEEECCSS--S-TT--------THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Hhh--cCCCCCEEEECCCC--C-CC--------cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 000 00111356666553 2 11 23567777776 999976666543
No 127
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=50.31 E-value=1.2e+02 Score=27.15 Aligned_cols=45 Identities=11% Similarity=0.056 Sum_probs=29.3
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..+++.+.-.+.-.|+|+|.|.|.- ...|+.+ + |..++||||.+.
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~----~~~la~~--~-~~~~v~~vD~s~ 74 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASV----SIEASNL--M-PNGRIFALERNP 74 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHH----HHHHHHH--C-TTSEEEEEECCH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHH----HHHHHHH--C-CCCEEEEEeCCH
Confidence 3455555555566899999998862 3334443 1 456999999754
No 128
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=49.38 E-value=49 Score=28.31 Aligned_cols=32 Identities=13% Similarity=0.023 Sum_probs=21.8
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.-+|+|+|.|.|. +...|+.+ ++ . +||||.+.
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~--~~-~--v~~vD~~~ 73 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE--GW-E--AVLVEKDP 73 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT--TC-E--EEEECCCH
T ss_pred CCeEEEeCCCcCH----HHHHHHHC--CC-e--EEEEeCCH
Confidence 3479999999985 34445554 33 3 99999753
No 129
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=48.08 E-value=77 Score=29.89 Aligned_cols=103 Identities=10% Similarity=0.118 Sum_probs=53.5
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEeccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTAC 361 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~ 361 (547)
.-.|+|+|.+.|.--. .||.+- ||..+|||||.+.. .++.+ .+.++..|++ .+|..- +..
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s~~------~~~~a----~~~~~~~g~~~~v~~~~~--d~~ 125 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--PADGQLLTLEADAH------HAQVA----RENLQLAGVDQRVTLREG--PAL 125 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECCHH------HHHHH----HHHHHHTTCTTTEEEEES--CHH
T ss_pred CCEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECCHH------HHHHH----HHHHHHcCCCCcEEEEEc--CHH
Confidence 3589999999886543 344432 33579999997532 23333 3445556775 565433 222
Q ss_pred cccccccc-ccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 362 EVERQHLR-VQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 362 ev~~~~L~-i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
+. +..+. ...=+.|+++.. ..+....+-...+-|+|.-+++++
T Consensus 126 ~~-l~~~~~~~~fD~V~~d~~------------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 126 QS-LESLGECPAFDLIFIDAD------------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp HH-HHTCCSCCCCSEEEECSC------------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred HH-HHhcCCCCCeEEEEECCc------------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 21 11111 012234554431 112233333445788999777774
No 130
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=46.32 E-value=80 Score=31.05 Aligned_cols=44 Identities=14% Similarity=-0.002 Sum_probs=29.1
Q ss_pred HHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 272 NVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 272 NqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
...|++++.-...-.|+|+|.|.|.-- ..|+.+ + -++|||+.+.
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~-~----~~v~~vDi~~ 74 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL-A----KKVITIDIDS 74 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT-S----SEEEEECSCH
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc-C----CEEEEEECCH
Confidence 345556655444458999999998743 456655 2 3899999753
No 131
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=45.97 E-value=41 Score=31.60 Aligned_cols=35 Identities=23% Similarity=0.144 Sum_probs=25.1
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..=+|+|+|.|.|. +...||.+. |..++||||.+.
T Consensus 24 ~~~~vLDiGCG~G~----~~~~la~~~---~~~~v~GvD~s~ 58 (225)
T 3p2e_A 24 FDRVHIDLGTGDGR----NIYKLAIND---QNTFYIGIDPVK 58 (225)
T ss_dssp CSEEEEEETCTTSH----HHHHHHHTC---TTEEEEEECSCC
T ss_pred CCCEEEEEeccCcH----HHHHHHHhC---CCCEEEEEeCCH
Confidence 33478999998883 455666543 468999999864
No 132
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=45.84 E-value=38 Score=33.36 Aligned_cols=99 Identities=18% Similarity=0.220 Sum_probs=54.2
Q ss_pred hhCchhhHHH-HHHH----HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchH
Q 008984 259 QICPYWKFAY-MSAN----VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGL 333 (547)
Q Consensus 259 e~sP~~kFa~-~tAN----qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L 333 (547)
.+-|=-+||. |..| ..|++++.-... +|+|+|.|.|. |-..|+.+. -++|||+.+.. .+
T Consensus 18 ~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~~------~~ 81 (271)
T 3fut_A 18 GLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDLR------LR 81 (271)
T ss_dssp TCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCGG------GH
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCHH------HH
Confidence 3445455554 3233 345566554556 99999999885 556677662 37999996542 24
Q ss_pred HHHHHHHHHHHHhCCCceEEEEecccccccccccccccCCceEEEeeccc
Q 008984 334 DIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFV 383 (547)
Q Consensus 334 ~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~ 383 (547)
+...+++. +-.+++ +..+..+++...+ .....|+-|.++.
T Consensus 82 ~~l~~~~~------~~~v~v--i~~D~l~~~~~~~--~~~~~iv~NlPy~ 121 (271)
T 3fut_A 82 PVLEETLS------GLPVRL--VFQDALLYPWEEV--PQGSLLVANLPYH 121 (271)
T ss_dssp HHHHHHTT------TSSEEE--EESCGGGSCGGGS--CTTEEEEEEECSS
T ss_pred HHHHHhcC------CCCEEE--EECChhhCChhhc--cCccEEEecCccc
Confidence 44444332 123443 3333333333222 1345788888775
No 133
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=45.31 E-value=89 Score=30.42 Aligned_cols=43 Identities=9% Similarity=0.074 Sum_probs=28.5
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..|++++.-...-+|+|+|.|.|.--..|.+ + + -++|||+.+.
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~----~-~----~~v~~vD~~~ 60 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLE----K-A----KKVVACELDP 60 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHH----H-S----SEEEEEESCH
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHh----h-C----CEEEEEECCH
Confidence 3455555444455899999999976555544 3 2 1899999653
No 134
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=45.14 E-value=84 Score=28.87 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=51.2
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEeccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTAC 361 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~ 361 (547)
.-.|+|+|.|.|.-=.. ||.+- |..++|+|+.+.. .++.+. +.++..|+. ++|... +..
T Consensus 55 ~~~vLdiG~G~G~~~~~----la~~~---~~~~v~~vD~~~~------~~~~a~----~~~~~~~~~~~v~~~~~--d~~ 115 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIR----MAQAL---PEATIVSIERDER------RYEEAH----KHVKALGLESRIELLFG--DAL 115 (233)
T ss_dssp CSEEEEECCTTSHHHHH----HHHHC---TTCEEEEECCCHH------HHHHHH----HHHHHTTCTTTEEEECS--CGG
T ss_pred CCEEEEecCCCcHHHHH----HHHHC---CCCEEEEEECCHH------HHHHHH----HHHHHcCCCCcEEEEEC--CHH
Confidence 34799999998854333 33321 2469999997532 233333 334455663 555432 222
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
+.......-.+=++|+++... + +..+.+-...+.|+|.-++++.
T Consensus 116 ~~~~~~~~~~~fD~I~~~~~~--~----------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 116 QLGEKLELYPLFDVLFIDAAK--G----------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GSHHHHTTSCCEEEEEEEGGG--S----------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHhcccCCCccEEEECCCH--H----------HHHHHHHHHHHHcCCCeEEEEE
Confidence 210000000111455555432 1 2233444555778999777764
No 135
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=44.84 E-value=1.8e+02 Score=27.04 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=28.4
Q ss_pred HHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 275 IGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+++.+.+.....|+|+|.|.|.- .-.|+.+- ..|..+|||||-+.
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~~----~~~la~~~-~~~~~~v~gvDis~ 87 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGYL----LTVLGLLH-RRSLRQVIASDVDP 87 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSHH----HHHHHHHT-GGGEEEEEEEESCH
T ss_pred HHHhcccCCCCeEEECCCCCCHH----HHHHHHHh-ccCCCeEEEEECCH
Confidence 33444444668999999999943 33344331 11457999999754
No 136
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=44.81 E-value=60 Score=28.69 Aligned_cols=29 Identities=21% Similarity=0.358 Sum_probs=22.1
Q ss_pred EEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 286 HIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 286 HIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.|+|+|.|.|. +...|+.+- ++||||.+.
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~------~v~gvD~s~ 54 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN------TVVSTDLNI 54 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS------EEEEEESCH
T ss_pred eEEEeccCccH----HHHHHHhcC------cEEEEECCH
Confidence 89999999984 455666552 999999754
No 137
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=44.02 E-value=64 Score=28.81 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=33.6
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEEE
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQD 355 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~ 355 (547)
-+|+|+|.|.|.--..|.+.+ |..++||||.+.. .++. +.+.++..|++ ++|..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~------~~~~----a~~~~~~~~~~~v~~~~ 121 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGK------RVRF----LRQVQHELKLENIEPVQ 121 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHH------HHHH----HHHHHHHTTCSSEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHH------HHHH----HHHHHHHcCCCCeEEEe
Confidence 489999999997655544432 3469999997532 2333 33445556765 56543
No 138
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=43.97 E-value=1.4e+02 Score=26.90 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=54.1
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-ceEEEEecccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-PFEFQDTAMTACE 362 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~e 362 (547)
.-.|+|+|.|.|.-= ..||.+. |..++||||.+.. .++.+.++ ++..|+ .++|... +..+
T Consensus 42 ~~~vLDiGcG~G~~~----~~la~~~---p~~~v~gvD~s~~------~l~~a~~~----~~~~~~~~v~~~~~--d~~~ 102 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFV----SGMAKQN---PDINYIGIDIQKS------VLSYALDK----VLEVGVPNIKLLWV--DGSD 102 (214)
T ss_dssp CCEEEEESCTTSHHH----HHHHHHC---TTSEEEEEESCHH------HHHHHHHH----HHHHCCSSEEEEEC--CSSC
T ss_pred CCeEEEEccCcCHHH----HHHHHHC---CCCCEEEEEcCHH------HHHHHHHH----HHHcCCCCEEEEeC--CHHH
Confidence 346999999998533 3344432 3579999997542 34444443 334455 3555432 2222
Q ss_pred cccccccccCCceEEEeecccccCCCCCCccccch----HHHHHHHH-HhcCCcEEEEEe
Q 008984 363 VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENH----RDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 363 v~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~----rd~~L~~V-k~L~PkvvtlvE 417 (547)
+. ..+.-..=+.|++|++. ++... ...+ ...+|+.+ +.|+|.-+++++
T Consensus 103 ~~-~~~~~~~~D~i~~~~~~--~~~~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 103 LT-DYFEDGEIDRLYLNFSD--PWPKK----RHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp GG-GTSCTTCCSEEEEESCC--CCCSG----GGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred HH-hhcCCCCCCEEEEECCC--Ccccc----chhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 11 11111112467777532 11100 0001 14566666 558999766665
No 139
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=43.22 E-value=79 Score=31.54 Aligned_cols=107 Identities=19% Similarity=0.136 Sum_probs=53.5
Q ss_pred cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEEEecccc
Q 008984 282 EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQDTAMTA 360 (547)
Q Consensus 282 e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~V~~~~ 360 (547)
...-.|+|.+.|.|.- .-.+|.+- .|..+|+|+|.+.. .++.+. +-++..|++ .+|.. .+.
T Consensus 202 ~~~~~vLD~gcGsG~~----~ie~a~~~--~~~~~v~g~Di~~~------~i~~a~----~n~~~~g~~~i~~~~--~D~ 263 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTI----ALEAASTL--GPTSPVYAGDLDEK------RLGLAR----EAALASGLSWIRFLR--ADA 263 (354)
T ss_dssp CTTCCEEESSCTTSHH----HHHHHHHH--CTTSCEEEEESCHH------HHHHHH----HHHHHTTCTTCEEEE--CCG
T ss_pred CCCCEEEeCCCCcCHH----HHHHHHhh--CCCceEEEEECCHH------HHHHHH----HHHHHcCCCceEEEe--CCh
Confidence 3345799999999862 22333321 14578999997542 244443 345556775 44433 222
Q ss_pred cccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCc
Q 008984 361 CEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPK 411 (547)
Q Consensus 361 ~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pk 411 (547)
.++... ...-.+|+.|-++........ ........+++.+ +.|+|.
T Consensus 264 ~~~~~~---~~~~D~Ii~npPyg~r~~~~~--~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 264 RHLPRF---FPEVDRILANPPHGLRLGRKE--GLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp GGGGGT---CCCCSEEEECCCSCC----CH--HHHHHHHHHHHHHHHTSCTT
T ss_pred hhCccc---cCCCCEEEECCCCcCccCCcc--cHHHHHHHHHHHHHHhcCCC
Confidence 222111 111268999988754322111 1111124566655 556785
No 140
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=41.51 E-value=1.9e+02 Score=25.88 Aligned_cols=45 Identities=9% Similarity=0.120 Sum_probs=29.3
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.+++.+.-...-.|+|+|.|.|.--..|.+.+ | |..++|||+.+.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~-~~~~v~~vD~~~ 112 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV-----G-EDGLVVSIERIP 112 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----C-TTSEEEEEESCH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh-----C-CCCEEEEEeCCH
Confidence 44455544445689999999886555555443 2 345899999753
No 141
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=40.56 E-value=1.8e+02 Score=28.33 Aligned_cols=46 Identities=9% Similarity=0.068 Sum_probs=29.0
Q ss_pred HHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 273 qAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..+++.+.-...-+|+|+|.|.|. +...||.+ +++..++|||+.+.
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~ 110 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSR 110 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCH
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCH
Confidence 345555554455689999998885 33344433 22246899999753
No 142
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=40.13 E-value=44 Score=31.45 Aligned_cols=103 Identities=12% Similarity=0.001 Sum_probs=55.3
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEeccccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEV 363 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev 363 (547)
--+|+|+|.|.|. +...|+++. | -++|||+.+. .+-++..+.++..+....|... +..++
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~~----------~~~~~a~~~~~~~~~~~~~~~~--~a~~~ 120 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECND----------GVFQRLRDWAPRQTHKVIPLKG--LWEDV 120 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECCH----------HHHHHHHHHGGGCSSEEEEEES--CHHHH
T ss_pred CCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCCH----------HHHHHHHHHHhhCCCceEEEee--hHHhh
Confidence 3478999998883 334455542 2 3789998753 2345556667777777666432 22222
Q ss_pred ccccccccCCceEEEe---ecccccCCCCCCccccchHHHHHH-HHHhcCCcEEEE
Q 008984 364 ERQHLRVQPGEAVVVN---FPFVLHHMPDESVSTENHRDRLLR-LVKSLSPKVVTL 415 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN---~~~~LHhl~desvs~~n~rd~~L~-~Vk~L~Pkvvtl 415 (547)
... +.-..=+.+.+. +...++|+++ ++.+|+ ..|-|+|.=+.+
T Consensus 121 ~~~-~~~~~FD~i~~D~~~~~~~~~~~~~--------~~~~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 121 APT-LPDGHFDGILYDTYPLSEETWHTHQ--------FNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp GGG-SCTTCEEEEEECCCCCBGGGTTTHH--------HHHHHHTHHHHEEEEEEEE
T ss_pred ccc-ccccCCceEEEeeeecccchhhhcc--------hhhhhhhhhheeCCCCEEE
Confidence 111 110111223222 2445555543 456666 447789986553
No 143
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=39.16 E-value=58 Score=31.13 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=34.1
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEEE
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQD 355 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~~ 355 (547)
..-+|+|+|.|.|.--..|.+.. |..+|||||.+.. .++ .+.+-++.+|+. .+|..
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-------~~~~v~~vD~s~~------~~~----~a~~~~~~~~l~~v~~~~ 136 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-------PELELVLVDATRK------KVA----FVERAIEVLGLKGARALW 136 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-------TTCEEEEEESCHH------HHH----HHHHHHHHHTCSSEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-------CCCEEEEEECCHH------HHH----HHHHHHHHhCCCceEEEE
Confidence 34589999999987544443321 4579999997542 233 334445566774 55543
No 144
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=38.92 E-value=2.4e+02 Score=26.86 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=29.1
Q ss_pred HHHHhhh---ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 008984 274 VIGEAVE---NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDS 323 (547)
Q Consensus 274 AILEA~~---ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~ 323 (547)
+|+++++ =...=.|+|+|.+.|. |...|-.+... .=+|+|||.+
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-----~G~V~avD~s 110 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-----NGKAYGVEFS 110 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-----TSEEEEEECC
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-----CCEEEEEECc
Confidence 4455543 2334578999999998 77666655432 2389999964
No 145
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=37.99 E-value=1.5e+02 Score=26.82 Aligned_cols=104 Identities=18% Similarity=0.263 Sum_probs=54.2
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC---ceEEEEeccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV---PFEFQDTAMTAC 361 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv---pFeF~~V~~~~~ 361 (547)
-.|+|+|.|.|.--. .++.+ |. -++||||.+.. .++.+.++ ++..|+ ..+|..- +..
T Consensus 55 ~~vLDlGcGtG~~~~----~~~~~--~~--~~v~gvD~s~~------~l~~a~~~----~~~~~~~~~~v~~~~~--d~~ 114 (201)
T 2ift_A 55 SECLDGFAGSGSLGF----EALSR--QA--KKVTFLELDKT------VANQLKKN----LQTLKCSSEQAEVINQ--SSL 114 (201)
T ss_dssp CEEEETTCTTCHHHH----HHHHT--TC--SEEEEECSCHH------HHHHHHHH----HHHTTCCTTTEEEECS--CHH
T ss_pred CeEEEcCCccCHHHH----HHHHc--cC--CEEEEEECCHH------HHHHHHHH----HHHhCCCccceEEEEC--CHH
Confidence 478999998885322 23333 11 48999997542 34444433 445666 3555432 222
Q ss_pred ccccccccccC-CceEEEeecccccCCCCCCccccchHHHHHHHHHh---cCCcEEEEEecCC
Q 008984 362 EVERQHLRVQP-GEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKS---LSPKVVTLVEQES 420 (547)
Q Consensus 362 ev~~~~L~i~~-gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~---L~PkvvtlvEqEa 420 (547)
+... .+.-.. =++|+.|.+| | . ...+.+|+.+.. |+|.-+++++-..
T Consensus 115 ~~~~-~~~~~~~fD~I~~~~~~--~-~--------~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 115 DFLK-QPQNQPHFDVVFLDPPF--H-F--------NLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp HHTT-SCCSSCCEEEEEECCCS--S-S--------CHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred HHHH-hhccCCCCCEEEECCCC--C-C--------ccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 2110 010011 1356666553 2 1 124567888765 9999776665443
No 146
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=36.17 E-value=2e+02 Score=29.74 Aligned_cols=107 Identities=12% Similarity=0.099 Sum_probs=59.3
Q ss_pred HHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc-eEEE
Q 008984 276 GEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP-FEFQ 354 (547)
Q Consensus 276 LEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp-FeF~ 354 (547)
++.+.....-.|+|+|.|.|.--. .||.+ .-+++||+.+.. .++.+.+ -|+..|++ .+|.
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-----~~~V~gvD~s~~------al~~A~~----n~~~~~~~~v~f~ 339 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-----AASVVGVEGVPA------LVEKGQQ----NARLNGLQNVTFY 339 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHH----HHHTT-----SSEEEEEESCHH------HHHHHHH----HHHHTTCCSEEEE
T ss_pred HHhhcCCCCCEEEECCCCCCHHHH----HHHhh-----CCEEEEEeCCHH------HHHHHHH----HHHHcCCCceEEE
Confidence 344432333479999999886433 45555 248999997542 2444433 34556774 6665
Q ss_pred Eecccccccccccccc--cCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 355 DTAMTACEVERQHLRV--QPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 355 ~V~~~~~ev~~~~L~i--~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
.- +..+. ...+.. ..=++|++|-+.. ..+.+++.+..++|+-++.+.
T Consensus 340 ~~--d~~~~-l~~~~~~~~~fD~Vv~dPPr~-------------g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 340 HE--NLEED-VTKQPWAKNGFDKVLLDPARA-------------GAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp EC--CTTSC-CSSSGGGTTCCSEEEECCCTT-------------CCHHHHHHHHHHCCSEEEEEE
T ss_pred EC--CHHHH-hhhhhhhcCCCCEEEECCCCc-------------cHHHHHHHHHhcCCCeEEEEE
Confidence 43 22221 111111 1225677663221 113688899999999888764
No 147
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=35.73 E-value=35 Score=30.38 Aligned_cols=44 Identities=20% Similarity=0.173 Sum_probs=27.7
Q ss_pred HHHhhhc-cceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCC
Q 008984 275 IGEAVEN-EHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQS 325 (547)
Q Consensus 275 ILEA~~g-e~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s 325 (547)
+++.+.. .+.-+|+|+|.|.|.--. .|+.+. |..++||||.+..
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~----~l~~~~---~~~~v~~vD~~~~ 65 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAV----SIALAC---PGVSVTAVDLSMD 65 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHH----HHHHHC---TTEEEEEEECC--
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHH----HHHHhC---CCCeEEEEECCHH
Confidence 3344443 556799999999996433 333331 4579999997643
No 148
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=34.86 E-value=2.8e+02 Score=25.87 Aligned_cols=112 Identities=14% Similarity=0.174 Sum_probs=54.8
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEeccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTAC 361 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~~ 361 (547)
.-.|+|+|.|.|. +...||.+. +. +||||+.+.. .++.+. +-++..|+. ++|.. .+..
T Consensus 50 ~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~~~------~~~~a~----~n~~~~~~~~~v~~~~--~D~~ 109 (259)
T 3lpm_A 50 KGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQER------LADMAK----RSVAYNQLEDQIEIIE--YDLK 109 (259)
T ss_dssp CCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCSHH------HHHHHH----HHHHHTTCTTTEEEEC--SCGG
T ss_pred CCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECCHH------HHHHHH----HHHHHCCCcccEEEEE--CcHH
Confidence 4579999999984 444667763 22 9999997532 233333 334455665 45433 2322
Q ss_pred ccccccccccCCceEEEeeccccc---CCCCC--Cccc-----cchHHHHHHHH-HhcCCcEEEEE
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLH---HMPDE--SVST-----ENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LH---hl~de--svs~-----~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
++. ..+.-..=++|+.|-++.-. ++... .... ....+.+++.+ +-|+|.-.+++
T Consensus 110 ~~~-~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 110 KIT-DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp GGG-GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred Hhh-hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 221 11111223578888766432 22211 0000 01234566555 66899855544
No 149
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=33.83 E-value=1.3e+02 Score=29.72 Aligned_cols=137 Identities=11% Similarity=0.136 Sum_probs=67.7
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHh-CCC-ceEEEEeccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAAS-CNV-PFEFQDTAMTAC 361 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s-~gv-pFeF~~V~~~~~ 361 (547)
.-+|+|+|.|.|. +...|+.++ |.-+||+|+-+.. .++...+++...... ++- .++|.. .+..
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~V~~VDid~~------vi~~ar~~~~~~~~~~~~~~rv~~~~--~D~~ 148 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRHK---NVESITMVEIDAG------VVSFCRQYLPNHNAGSYDDPRFKLVI--DDGV 148 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTCT---TCCEEEEECSCTT------HHHHHHHHCHHHHSSCTTCTTCCEEC--SCSC
T ss_pred CCEEEEEeCChhH----HHHHHHhCC---CCCEEEEEECCHH------HHHHHHHhhhhcccccccCCceEEEE--ChHH
Confidence 3479999999885 455666653 4579999997653 466666666554321 111 233322 1211
Q ss_pred ccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecCCCCCCCChhHHHHHHHHHHHH
Q 008984 362 EVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTA 440 (547)
Q Consensus 362 ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvEqEan~ns~~F~~RF~EaL~yYsA 440 (547)
+.- .. .-..=++|++++.. +..+++..- ...|++.+ +.|+|.-++++.-++.... .+.+.+.+....+
T Consensus 149 ~~l-~~-~~~~fDvIi~D~~~--p~~~~~~l~----~~~f~~~~~~~LkpgG~lv~~~~s~~~~---~~~~~~~~~~l~~ 217 (294)
T 3adn_A 149 NFV-NQ-TSQTFDVIISDCTD--PIGPGESLF----TSAFYEGCKRCLNPGGIFVAQNGVCFLQ---QEEAIDSHRKLSH 217 (294)
T ss_dssp C----C-CCCCEEEEEECC------------C----CHHHHHHHHHTEEEEEEEEEEEEECSSC---CHHHHHHHHHHHH
T ss_pred HHH-hh-cCCCccEEEECCCC--ccCcchhcc----HHHHHHHHHHhcCCCCEEEEecCCcccc---hHHHHHHHHHHHH
Confidence 110 00 00112466666532 111111100 14566555 6789997776653322112 2455666666667
Q ss_pred Hhhhhh
Q 008984 441 MFESID 446 (547)
Q Consensus 441 lFDSLD 446 (547)
+|....
T Consensus 218 ~F~~v~ 223 (294)
T 3adn_A 218 YFSDVG 223 (294)
T ss_dssp HCSEEE
T ss_pred HCCCeE
Confidence 776654
No 150
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=33.50 E-value=1e+02 Score=30.28 Aligned_cols=111 Identities=10% Similarity=0.098 Sum_probs=55.5
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC-CceEEEEeccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN-VPFEFQDTAMTACEV 363 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpFeF~~V~~~~~ev 363 (547)
-.|+|+|.|.|. +...|+.+ +|..+||+|+.+.. .++...+++..++..++ -.++|..- +..+.
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid~~------~i~~a~~~~~~~~~~~~~~~v~~~~~--D~~~~ 161 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDIDGE------VMEQSKQHFPQISRSLADPRATVRVG--DGLAF 161 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESCHH------HHHHHHHHCHHHHGGGGCTTEEEEES--CHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECCHH------HHHHHHHHhHHhhcccCCCcEEEEEC--cHHHH
Confidence 479999999885 45566655 34579999997542 35666666655544432 22444332 22111
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
... ..-..=++|++|... ++.+++..- ...+++.+ +.|+|.-++++.
T Consensus 162 ~~~-~~~~~fDvIi~d~~~--~~~~~~~l~----~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 162 VRQ-TPDNTYDVVIIDTTD--PAGPASKLF----GEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp HHS-SCTTCEEEEEEECC-----------C----CHHHHHHHHHHEEEEEEEEEE
T ss_pred HHh-ccCCceeEEEECCCC--ccccchhhh----HHHHHHHHHHhcCCCcEEEEe
Confidence 000 000112466666533 222221110 13556555 778998666654
No 151
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=33.39 E-value=48 Score=30.03 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhhccCCCCC
Q 008984 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGE 212 (547)
Q Consensus 177 L~~LLl~CAeAV~~gd~~~A~~lL~~L~~~aS~~Gd 212 (547)
+=+-|-+|++|++.||+..|+.||.... +.-|+|+
T Consensus 58 IW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gd 92 (137)
T 2ksn_A 58 IWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGA 92 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCc
Confidence 4466788999999999999999997764 5556776
No 152
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=33.34 E-value=69 Score=31.91 Aligned_cols=117 Identities=17% Similarity=0.170 Sum_probs=61.0
Q ss_pred HHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc
Q 008984 271 ANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350 (547)
Q Consensus 271 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 350 (547)
....|++.+.....-+|+|+|.|.|.--. .|+.+ + |..++||||.+.. .++.+.+++ +..|+.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~----~la~~--~-~~~~v~~vD~s~~------~l~~a~~~~----~~~~~~ 246 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSV----AFARH--S-PKIRLTLCDVSAP------AVEASRATL----AANGVE 246 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHH----HHHHH--C-TTCBCEEEESBHH------HHHHHHHHH----HHTTCC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHH----HHHHH--C-CCCEEEEEECCHH------HHHHHHHHH----HHhCCC
Confidence 35678887743333479999999886433 33333 2 4568999997542 244444433 446676
Q ss_pred eEEEEecccccccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEE
Q 008984 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLV 416 (547)
Q Consensus 351 FeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~Pkvvtlv 416 (547)
.+|.. .+..+. . -..=++|+.|.+ +|+-... . ......+|+.+ +.|+|.-.+++
T Consensus 247 ~~~~~--~d~~~~----~-~~~fD~Iv~~~~--~~~g~~~--~-~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 247 GEVFA--SNVFSE----V-KGRFDMIISNPP--FHDGMQT--S-LDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp CEEEE--CSTTTT----C-CSCEEEEEECCC--CCSSSHH--H-HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CEEEE--cccccc----c-cCCeeEEEECCC--cccCccC--C-HHHHHHHHHHHHHhCCCCcEEEE
Confidence 66632 221111 1 111235555654 4542210 1 12234555555 67899855433
No 153
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=33.04 E-value=1.8e+02 Score=28.09 Aligned_cols=135 Identities=12% Similarity=0.108 Sum_probs=70.8
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCC-ceEEEEecccccc
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV-PFEFQDTAMTACE 362 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gv-pFeF~~V~~~~~e 362 (547)
.-+|+|+|.|.|. +...++.++ |.-+||+|+-+. ..++.+.+++.+++..++- .++++. .+..+
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vEid~------~~v~~ar~~~~~~~~~~~~~rv~v~~--~D~~~ 140 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---SVKKATLVDIDG------KVIEYSKKFLPSIAGKLDDPRVDVQV--DDGFM 140 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---TCSEEEEEESCH------HHHHHHHHHCHHHHTTTTSTTEEEEE--SCSHH
T ss_pred CCEEEEECCchHH----HHHHHHhCC---CCceEEEEECCH------HHHHHHHHHhHhhccccCCCceEEEE--CcHHH
Confidence 3579999999884 455666653 456999999654 2356666666555433322 244432 22221
Q ss_pred -cccccccccCCceEEEeecccccCCCCCCccccchHHHHHHH-HHhcCCcEEEEEecCCCCCCCCh-hHHHHHHHHHHH
Q 008984 363 -VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL-VKSLSPKVVTLVEQESKTNTSPF-FHRFLETLDYYT 439 (547)
Q Consensus 363 -v~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~-Vk~L~PkvvtlvEqEan~ns~~F-~~RF~EaL~yYs 439 (547)
+.. .. ..=++|+++... +..+.+..- ...+++. .+.|+|.-++++.... +.+ ...+.+.+....
T Consensus 141 ~l~~--~~-~~fD~Ii~d~~~--~~~~~~~l~----~~~~~~~~~~~L~pgG~lv~~~~~----~~~~~~~~~~~~~~l~ 207 (275)
T 1iy9_A 141 HIAK--SE-NQYDVIMVDSTE--PVGPAVNLF----TKGFYAGIAKALKEDGIFVAQTDN----PWFTPELITNVQRDVK 207 (275)
T ss_dssp HHHT--CC-SCEEEEEESCSS--CCSCCCCCS----TTHHHHHHHHHEEEEEEEEEECCC----TTTCHHHHHHHHHHHH
T ss_pred HHhh--CC-CCeeEEEECCCC--CCCcchhhh----HHHHHHHHHHhcCCCcEEEEEcCC----ccccHHHHHHHHHHHH
Confidence 110 00 122566766543 222221111 1245544 4778999777775321 212 455666666666
Q ss_pred HHhhhhh
Q 008984 440 AMFESID 446 (547)
Q Consensus 440 AlFDSLD 446 (547)
.+|....
T Consensus 208 ~~F~~v~ 214 (275)
T 1iy9_A 208 EIFPITK 214 (275)
T ss_dssp TTCSEEE
T ss_pred HhCCCeE
Confidence 6675443
No 154
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=31.82 E-value=1.3e+02 Score=31.80 Aligned_cols=117 Identities=9% Similarity=0.059 Sum_probs=61.5
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHH---HHHHHHHHHhCCC-
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIV---GKRLSEFAASCNV- 349 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~t---G~rL~~fA~s~gv- 349 (547)
.|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+.+.. .++.+ -+.+.+-++..|+
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~~------~l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMDD------ASDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCHH------HHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCHH------HHHHHHHhHHHHHHHHHHcCCC
Confidence 45566554455579999999987655544432 2348999997642 23333 2223444556674
Q ss_pred --ceEEEEecccccccccccc--cccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEE
Q 008984 350 --PFEFQDTAMTACEVERQHL--RVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416 (547)
Q Consensus 350 --pFeF~~V~~~~~ev~~~~L--~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~Pkvvtlv 416 (547)
.++|..- .... ....+ ...+=++|++|..+ + . .+....+-.+.+.|+|.-.+++
T Consensus 300 ~~nV~~i~g--D~~~-~~~~~~~~~~~FDvIvvn~~l--~-~-------~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 300 LNNVEFSLK--KSFV-DNNRVAELIPQCDVILVNNFL--F-D-------EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp CCCEEEEES--SCST-TCHHHHHHGGGCSEEEECCTT--C-C-------HHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCceEEEEc--Cccc-cccccccccCCCCEEEEeCcc--c-c-------ccHHHHHHHHHHhCCCCeEEEE
Confidence 3555321 1100 00001 01233577777533 1 1 1233445566788999865554
No 155
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=31.36 E-value=2.9e+02 Score=25.24 Aligned_cols=34 Identities=6% Similarity=-0.026 Sum_probs=23.1
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
..-+|+|+|.|.|. +...|+.+. + -++||||.+.
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~s~ 93 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECND 93 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEECCH
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcCCH
Confidence 45689999999984 334445432 2 2899999764
No 156
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=31.30 E-value=17 Score=38.08 Aligned_cols=62 Identities=15% Similarity=0.110 Sum_probs=33.8
Q ss_pred ceEEEeecccccCC---CCCCccccchHHHHHHHHHhcCCcEEEEEecCCCCCCCChhHHHHHHHHHHHHHh
Q 008984 374 EAVVVNFPFVLHHM---PDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMF 442 (547)
Q Consensus 374 EaLaVN~~~~LHhl---~desvs~~n~rd~~L~~Vk~L~PkvvtlvEqEan~ns~~F~~RF~EaL~yYsAlF 442 (547)
|+|+|.|-+=-|.- ..-.++.... ..+.+.+|+++-++|++.|..-+. .....|+.|-+++.
T Consensus 250 d~IvvsaG~Da~~~DpLg~l~Lt~~g~-~~~~~~l~~~~~p~v~v~eGGY~~------~~var~w~~~~a~l 314 (376)
T 4a69_A 250 TCIVLQCGADSLGCDRLGCFNLSIRGH-GECVEYVKSFNIPLLVLGGGGYTV------RNVARCWTYETSLL 314 (376)
T ss_dssp SEEEEECCGGGBTTCSSCCCBBCHHHH-HHHHHHHHTTCCCEEEECCCCCSH------HHHHHHHHHHHHHH
T ss_pred CEEEEeCcccCCCCCcccCeecCHHHH-HHHHHHHHHcCCCEEEEECCCCCh------hHHHHHHHHHHHHh
Confidence 57777775533332 1222232222 345677888888887777644332 23455666666554
No 157
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=31.16 E-value=3.3e+02 Score=28.22 Aligned_cols=95 Identities=26% Similarity=0.381 Sum_probs=55.1
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVE 364 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~ 364 (547)
-.|+|++.|.|.--. .||.+ + -+++||+.+.. .++.+.++ |+..|++.+|..- +..++.
T Consensus 292 ~~VLDlgcG~G~~sl----~la~~--~---~~V~gvD~s~~------ai~~A~~n----~~~ngl~v~~~~~--d~~~~~ 350 (425)
T 2jjq_A 292 EKILDMYSGVGTFGI----YLAKR--G---FNVKGFDSNEF------AIEMARRN----VEINNVDAEFEVA--SDREVS 350 (425)
T ss_dssp SEEEEETCTTTHHHH----HHHHT--T---CEEEEEESCHH------HHHHHHHH----HHHHTCCEEEEEC--CTTTCC
T ss_pred CEEEEeeccchHHHH----HHHHc--C---CEEEEEECCHH------HHHHHHHH----HHHcCCcEEEEEC--ChHHcC
Confidence 368999999886333 45554 2 28999997542 24444333 4445666555433 333321
Q ss_pred cccccccCCceEEEeecccccCCCCCCccccchHHHHHHHHHhcCCcEEEEEe
Q 008984 365 RQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVE 417 (547)
Q Consensus 365 ~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~Vk~L~PkvvtlvE 417 (547)
.. .=++|++|-+. . ...+.+++.++.|+|+-++.+.
T Consensus 351 ~~-----~fD~Vv~dPPr-------~-----g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 351 VK-----GFDTVIVDPPR-------A-----GLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp CT-----TCSEEEECCCT-------T-----CSCHHHHHHHHHHCCSEEEEEE
T ss_pred cc-----CCCEEEEcCCc-------c-----chHHHHHHHHHhcCCCcEEEEE
Confidence 11 23466666432 1 1124688999999999887774
No 158
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=30.99 E-value=1.4e+02 Score=27.66 Aligned_cols=102 Identities=11% Similarity=0.174 Sum_probs=52.2
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEEecccc
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQDTAMTA 360 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~V~~~~ 360 (547)
+.-.|+|+|.+.|.--. .||... |..++||||.+.. .++.+ .+.++..|++ .+|..- +.
T Consensus 71 ~~~~vLDiG~G~G~~~~----~la~~~---~~~~v~~vD~~~~------~~~~a----~~~~~~~~~~~~v~~~~~--d~ 131 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSM----QFASIS---DDIHVTTIERNET------MIQYA----KQNLATYHFENQVRIIEG--NA 131 (232)
T ss_dssp TCCEEEEECCSSSHHHH----HHHTTC---TTCEEEEEECCHH------HHHHH----HHHHHHTTCTTTEEEEES--CG
T ss_pred CCCEEEEEeCchhHHHH----HHHHhC---CCCEEEEEECCHH------HHHHH----HHHHHHcCCCCcEEEEEC--CH
Confidence 44589999999886332 344421 3579999997532 23333 3344556763 555432 22
Q ss_pred cccccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEe
Q 008984 361 CEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVE 417 (547)
Q Consensus 361 ~ev~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvE 417 (547)
.+.-.+.+. ..=+.|+++.. ..+ ...+|+.+ +.|+|.-+++++
T Consensus 132 ~~~~~~~~~-~~fD~V~~~~~------------~~~-~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 132 LEQFENVND-KVYDMIFIDAA------------KAQ-SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp GGCHHHHTT-SCEEEEEEETT------------SSS-HHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHhhcc-CCccEEEEcCc------------HHH-HHHHHHHHHHhcCCCeEEEEe
Confidence 221110110 11134444421 012 23455544 778999888774
No 159
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=29.82 E-value=1.2e+02 Score=27.54 Aligned_cols=55 Identities=11% Similarity=0.105 Sum_probs=33.1
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEE
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQD 355 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~ 355 (547)
-+|+|+|.+.|.--. .||.+- |+..+||+||.+.. .++.+. +.++..|+. ++|..
T Consensus 66 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~------~~~~a~----~~~~~~~~~~~v~~~~ 122 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVDEK------STALAK----EYWEKAGLSDKIGLRL 122 (225)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESCHH------HHHHHH----HHHHHTTCTTTEEEEE
T ss_pred CEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCCHH------HHHHHH----HHHHHCCCCCceEEEe
Confidence 489999999886433 344432 23579999997532 233333 344556665 66654
No 160
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=29.69 E-value=2e+02 Score=24.67 Aligned_cols=37 Identities=24% Similarity=0.230 Sum_probs=24.1
Q ss_pred hhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 279 VENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 279 ~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+.-...-+|+|+|.|.|. +...|+.+. .++||||.+.
T Consensus 29 ~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~ 65 (192)
T 1l3i_A 29 AEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNP 65 (192)
T ss_dssp HCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCH
T ss_pred cCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCH
Confidence 333344589999998874 333455442 5899999753
No 161
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=29.61 E-value=1.8e+02 Score=29.16 Aligned_cols=134 Identities=12% Similarity=0.131 Sum_probs=67.5
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhC-CCceEEEEeccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC-NVPFEFQDTAMTACEV 363 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-gvpFeF~~V~~~~~ev 363 (547)
-+|+|+|.|.|. +...|+.++ |..+||+|+.+. ..++...+++.+++..+ +-.++|..- +..+.
T Consensus 122 ~~VLdIG~G~G~----~a~~la~~~---~~~~V~~VDis~------~~l~~Ar~~~~~~~~gl~~~rv~~~~~--D~~~~ 186 (334)
T 1xj5_A 122 KKVLVIGGGDGG----VLREVARHA---SIEQIDMCEIDK------MVVDVSKQFFPDVAIGYEDPRVNLVIG--DGVAF 186 (334)
T ss_dssp CEEEEETCSSSH----HHHHHTTCT---TCCEEEEEESCH------HHHHHHHHHCHHHHGGGGSTTEEEEES--CHHHH
T ss_pred CEEEEECCCccH----HHHHHHHcC---CCCEEEEEECCH------HHHHHHHHHHHhhccccCCCcEEEEEC--CHHHH
Confidence 479999999886 455666653 567999999754 23566666665554323 123555332 22111
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecCCCCCCCChhHHHHHHHHHHHHHh
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMF 442 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvEqEan~ns~~F~~RF~EaL~yYsAlF 442 (547)
+..+.-..=++|++|+....+.. + .. ....+++.+ +.|+|.-++++.-+.-.... ..+.+.+.-...+|
T Consensus 187 -l~~~~~~~fDlIi~d~~~p~~~~-~-~l----~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~~~l~~~F 256 (334)
T 1xj5_A 187 -LKNAAEGSYDAVIVDSSDPIGPA-K-EL----FEKPFFQSVARALRPGGVVCTQAESLWLHM---DIIEDIVSNCREIF 256 (334)
T ss_dssp -HHTSCTTCEEEEEECCCCTTSGG-G-GG----GSHHHHHHHHHHEEEEEEEEEECCCTTTCH---HHHHHHHHHHHHHC
T ss_pred -HHhccCCCccEEEECCCCccCcc-h-hh----hHHHHHHHHHHhcCCCcEEEEecCCccccH---HHHHHHHHHHHHhC
Confidence 00010011246666654222211 1 00 013455554 77899987777533322221 22344444445566
Q ss_pred h
Q 008984 443 E 443 (547)
Q Consensus 443 D 443 (547)
.
T Consensus 257 ~ 257 (334)
T 1xj5_A 257 K 257 (334)
T ss_dssp S
T ss_pred c
Confidence 5
No 162
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=29.26 E-value=2.9e+02 Score=25.59 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=30.7
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHH
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEF 343 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~f 343 (547)
+.-.|+|+|.|.|.-- ..||.+- |..++||||.+.. .++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~~~----~~la~~~---~~~~v~gvD~s~~------~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLM----IDLSPAF---PEDLILGMEIRVQ------VTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSHHH----HHHHHHS---TTSEEEEEESCHH------HHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHH----HHHHHhC---CCCCEEEEEcCHH------HHHHHHHHHHHH
Confidence 4468999999998633 3344332 3579999997542 356666555444
No 163
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=28.71 E-value=3.6e+02 Score=26.43 Aligned_cols=67 Identities=13% Similarity=0.036 Sum_probs=38.8
Q ss_pred HHHHHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc
Q 008984 271 ANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350 (547)
Q Consensus 271 ANqAILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp 350 (547)
+-+.+.+++.-...-.|+|+|.+.|.--..|.+.+ ++.-+|||||.+.. .++.+.+ -++..|++
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s~~------~l~~a~~----~~~~~g~~ 169 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVDEN------RLRETRL----NLSRLGVL 169 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSCHH------HHHHHHH----HHHHHTCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCCHH------HHHHHHH----HHHHhCCC
Confidence 44445555554444579999999987544443332 12458999997542 3444444 44455763
Q ss_pred -eEE
Q 008984 351 -FEF 353 (547)
Q Consensus 351 -FeF 353 (547)
++|
T Consensus 170 ~v~~ 173 (315)
T 1ixk_A 170 NVIL 173 (315)
T ss_dssp SEEE
T ss_pred eEEE
Confidence 444
No 164
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=28.38 E-value=3.4e+02 Score=24.72 Aligned_cols=34 Identities=15% Similarity=0.074 Sum_probs=22.6
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.-.|+|+|.|.|.- ...||.+-+ .-+++|||.+.
T Consensus 75 ~~~VLDlGcG~G~~----~~~la~~~~---~~~v~gvD~s~ 108 (230)
T 1fbn_A 75 DSKILYLGASAGTT----PSHVADIAD---KGIVYAIEYAP 108 (230)
T ss_dssp TCEEEEESCCSSHH----HHHHHHHTT---TSEEEEEESCH
T ss_pred CCEEEEEcccCCHH----HHHHHHHcC---CcEEEEEECCH
Confidence 34799999998863 334444422 34899999753
No 165
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=28.24 E-value=1.1e+02 Score=27.07 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=22.6
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
+.-.|+|+|.|.|.- ...|+.+ |+. ++||||.+.
T Consensus 42 ~~~~vLdiGcG~G~~----~~~l~~~--~~~--~v~~~D~s~ 75 (215)
T 2pxx_A 42 PEDRILVLGCGNSAL----SYELFLG--GFP--NVTSVDYSS 75 (215)
T ss_dssp TTCCEEEETCTTCSH----HHHHHHT--TCC--CEEEEESCH
T ss_pred CCCeEEEECCCCcHH----HHHHHHc--CCC--cEEEEeCCH
Confidence 345799999988753 3344444 332 899999753
No 166
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=27.54 E-value=21 Score=37.51 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=18.8
Q ss_pred HHHhhhccceeEEEEecc--cCccchH
Q 008984 275 IGEAVENEHIIHIIDFQI--AQGTQWM 299 (547)
Q Consensus 275 ILEA~~ge~rVHIIDf~I--~~G~QWp 299 (547)
|..+.++.+||=|||||+ |.|+|+.
T Consensus 162 a~~l~~~~~RV~ivD~DvHHGnGtq~i 188 (388)
T 3ew8_A 162 ILRLRRKFERILYVDLDLHHGDGVEDA 188 (388)
T ss_dssp HHHHTTTCSCEEEEECSSSCCHHHHHH
T ss_pred HHHHHhcCCeEEEEecCCCCChhHHHH
Confidence 445556678999999999 5558864
No 167
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=27.42 E-value=2.2e+02 Score=26.30 Aligned_cols=45 Identities=16% Similarity=0.183 Sum_probs=29.5
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.|++.+.-...-.|+|+|.|.|.--..|.+.+ .|..+++|||.+.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~ 128 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIRE 128 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCH
Confidence 55566554555679999999986444444433 1356899998753
No 168
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=26.98 E-value=91 Score=30.21 Aligned_cols=42 Identities=12% Similarity=0.149 Sum_probs=29.7
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+.+.
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEid~ 61 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEIDR 61 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEECCH
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEECCH
Confidence 46666654555689999999886 456677662 3899999653
No 169
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=26.96 E-value=2e+02 Score=25.89 Aligned_cols=56 Identities=20% Similarity=0.201 Sum_probs=32.5
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEE
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQD 355 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~ 355 (547)
.-+|+|+|.+.|.--. .||.+- |+..++|+|+.+.. .++.+. +.++..|++ ++|..
T Consensus 59 ~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~------~~~~a~----~~~~~~~~~~~v~~~~ 116 (223)
T 3duw_A 59 ARNILEIGTLGGYSTI----WLARGL--SSGGRVVTLEASEK------HADIAR----SNIERANLNDRVEVRT 116 (223)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTC--CSSCEEEEEESCHH------HHHHHH----HHHHHTTCTTTEEEEE
T ss_pred CCEEEEecCCccHHHH----HHHHhC--CCCCEEEEEECCHH------HHHHHH----HHHHHcCCCCcEEEEE
Confidence 4579999998885332 344432 33569999996531 233333 344556763 55544
No 170
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=26.96 E-value=2.5e+02 Score=26.52 Aligned_cols=45 Identities=18% Similarity=0.242 Sum_probs=27.7
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.|++.+.-...-.|+|+|.|.|.--. .|+.+-+ |..++|+|+.+.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~----~la~~~~--~~~~v~~vD~s~ 147 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCA----VLARAVG--SSGKVFAYEKRE 147 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHH----HHHHHTT--TTCEEEEECCCH
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHH----HHHHHhC--CCcEEEEEECCH
Confidence 45555544444589999999885333 3443311 345999999653
No 171
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=26.55 E-value=1.2e+02 Score=29.92 Aligned_cols=45 Identities=11% Similarity=0.089 Sum_probs=30.5
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCC-eEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSP-LVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP-~LRITgI~~~~ 324 (547)
.|++++.-...-+|+|+|.|.|.-=..|.+.. ++ ..++|||+-+.
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~------~~~~~~V~avDid~ 78 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARL------ATPGSPLHAVELDR 78 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHH------CBTTBCEEEEECCH
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhC------CCcCCeEEEEECCH
Confidence 46666655555689999999998655555442 22 35699999653
No 172
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=26.45 E-value=99 Score=26.86 Aligned_cols=50 Identities=16% Similarity=0.241 Sum_probs=36.0
Q ss_pred eEEEEeccc-CccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCce
Q 008984 285 IHIIDFQIA-QGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351 (547)
Q Consensus 285 VHIIDf~I~-~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpF 351 (547)
-=|||++-. ...+|..|++.|.++ .|++-||..... .++.+.|+..|+|+
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~-----gl~~vGV~g~~~------------~~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTST-----GLRIIGVSGCKD------------ASLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTT-----TCEEEEEESCCC------------HHHHHHHHHHTCCE
T ss_pred cEEEEccccCChHHHHHHHHHHHHc-----CCEEEEEeCCCc------------HHHHHHHHHCCCCc
Confidence 347888743 458999999999887 488888864321 23456788889985
No 173
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=26.39 E-value=1.7e+02 Score=27.67 Aligned_cols=51 Identities=24% Similarity=0.245 Sum_probs=31.7
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEE
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 354 (547)
-.|+|+|.|.|. +..+++.+ |+ +++|||.+.. .++.+.++ ++..|+.++|.
T Consensus 122 ~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~------~v~~a~~n----~~~~~~~v~~~ 172 (254)
T 2nxc_A 122 DKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPM------VLPQAEAN----AKRNGVRPRFL 172 (254)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGG------GHHHHHHH----HHHTTCCCEEE
T ss_pred CEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHH------HHHHHHHH----HHHcCCcEEEE
Confidence 479999998886 33345554 43 9999997542 35554443 44566664543
No 174
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=26.37 E-value=2.7e+02 Score=25.04 Aligned_cols=35 Identities=17% Similarity=0.071 Sum_probs=22.6
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.-+|+|+|.+.|.- ...||..- |+.-+||+|+.+.
T Consensus 70 ~~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~~~ 104 (229)
T 2avd_A 70 AKKALDLGTFTGYS----ALALALAL--PADGRVVTCEVDA 104 (229)
T ss_dssp CCEEEEECCTTSHH----HHHHHTTS--CTTCEEEEEESCS
T ss_pred CCEEEEEcCCccHH----HHHHHHhC--CCCCEEEEEECCH
Confidence 34799999988742 23344432 2346999999754
No 175
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=25.93 E-value=24 Score=36.85 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=35.2
Q ss_pred ceEEEeecccccCC---CCCCccccchHHHHHHHHHhcCCcEEEEEecCCCCCCCChhHHHHHHHHHHHHHh
Q 008984 374 EAVVVNFPFVLHHM---PDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMF 442 (547)
Q Consensus 374 EaLaVN~~~~LHhl---~desvs~~n~rd~~L~~Vk~L~PkvvtlvEqEan~ns~~F~~RF~EaL~yYsAlF 442 (547)
|+|+|.|-+=-|.- ..-.++... -..+.+.+++++.++|++.|..=+ +.....++.|-+++.
T Consensus 249 d~ivvsaG~D~~~~Dplg~~~lt~~g-~~~~~~~~~~~~~p~v~~~eGGY~------~~~var~wt~~ta~~ 313 (367)
T 3max_A 249 SAVVLQCGADSLSGDRLGCFNLTVKG-HAKCVEVVKTFNLPLLMLGGGGYT------IRNVARCWTYETAVA 313 (367)
T ss_dssp SEEEEECCGGGBTTCSSCCCCBCHHH-HHHHHHHHHTTCCCEEEECCCCCS------HHHHHHHHHHHHHHH
T ss_pred CEEEEECCccCcCCCCCCCeeeCHHH-HHHHHHHHHhcCCCEEEEeCCCCC------hhHHHHHHHHHHHHH
Confidence 67777776643332 112223222 234678888888888887764433 234556666666654
No 176
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=25.49 E-value=3.6e+02 Score=24.25 Aligned_cols=42 Identities=5% Similarity=0.122 Sum_probs=26.4
Q ss_pred HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 274 VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 274 AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
.|++.+.-...-+|+|+|.|.|.--.. |+.+. -++|||+.+.
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~-----~~v~~vD~~~ 102 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTAL----IAEIV-----DKVVSVEINE 102 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHH----HHHHS-----SEEEEEESCH
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHHc-----CEEEEEeCCH
Confidence 444555444455899999998864333 33331 4899999753
No 177
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=25.47 E-value=1.9e+02 Score=28.75 Aligned_cols=99 Identities=17% Similarity=0.085 Sum_probs=48.5
Q ss_pred hCchhhHHH-HHHHH----HHHHhhhccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHH
Q 008984 260 ICPYWKFAY-MSANV----VIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLD 334 (547)
Q Consensus 260 ~sP~~kFa~-~tANq----AILEA~~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~ 334 (547)
+-|=-+||. |..+. .|++++.-...-+|+|+|.|.|..-..|. .+ + -++|||+.+.. .++
T Consensus 22 ~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La----~~-~----~~V~aVEid~~------li~ 86 (295)
T 3gru_A 22 FKPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELA----KN-A----KKVYVIEIDKS------LEP 86 (295)
T ss_dssp --------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHH----HH-S----SEEEEEESCGG------GHH
T ss_pred CCCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHH----hc-C----CEEEEEECCHH------HHH
Confidence 345555554 44444 45555554455689999999987544444 33 1 37999997542 344
Q ss_pred HHHHHHHHHHHhCCCceEEEEecccccccccccccccCCceEEEeeccc
Q 008984 335 IVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFV 383 (547)
Q Consensus 335 ~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~~~~L~i~~gEaLaVN~~~~ 383 (547)
...+++. ..+ .++|. ..+..+++... .+-.+|+.|.++.
T Consensus 87 ~a~~~~~----~~~-~v~vi--~gD~l~~~~~~---~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 87 YANKLKE----LYN-NIEII--WGDALKVDLNK---LDFNKVVANLPYQ 125 (295)
T ss_dssp HHHHHHH----HCS-SEEEE--ESCTTTSCGGG---SCCSEEEEECCGG
T ss_pred HHHHHhc----cCC-CeEEE--ECchhhCCccc---CCccEEEEeCccc
Confidence 4444443 111 24443 33333222222 1235788887764
No 178
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=25.41 E-value=1.3e+02 Score=27.93 Aligned_cols=59 Identities=15% Similarity=0.165 Sum_probs=35.0
Q ss_pred hccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc---eEEE
Q 008984 280 ENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP---FEFQ 354 (547)
Q Consensus 280 ~ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp---FeF~ 354 (547)
...+.-.|+|+|.+.|.-=..|.+++ ||.-+||+|+.+.. .++. ..+.++..|+. ++|.
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~------~~~~----a~~~~~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESE------HQRQ----AKALFREAGYSPSRVRFL 114 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHH------HHHH----HHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHH------HHHH----HHHHHHHcCCCcCcEEEE
Confidence 33445589999988886544444443 23468999997532 2333 33445566775 5554
No 179
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=24.59 E-value=38 Score=28.54 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=32.7
Q ss_pred CCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEE
Q 008984 310 GGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354 (547)
Q Consensus 310 ggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~ 354 (547)
=|||.-|||........ ....|+++-+.+.+..+..|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k~--ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPKE--ASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHHH--HHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHHH--HHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 38999888888754321 12457888899999999999999986
No 180
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=24.16 E-value=1.3e+02 Score=29.42 Aligned_cols=42 Identities=10% Similarity=-0.037 Sum_probs=28.2
Q ss_pred ceeEEEEecccCccchHHHHHHHhcC-CCCCCeEEEEeecCCC
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKR-PGGSPLVRITGIDDSQ 324 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~R-pggPP~LRITgI~~~~ 324 (547)
+.+.|.|.|.+.|.---+|--.|+.. +..+...+|+|+|-+.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~ 147 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT 147 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH
Confidence 46899999999997544444445543 2222257999999764
No 181
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=24.15 E-value=1.7e+02 Score=27.16 Aligned_cols=56 Identities=11% Similarity=0.057 Sum_probs=35.5
Q ss_pred ceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCc--eEEEE
Q 008984 283 HIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP--FEFQD 355 (547)
Q Consensus 283 ~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvp--FeF~~ 355 (547)
+.-+|+|+|.|.|.--..|.+.. |..++||||.+.. .++.+.++ ++..|++ ++|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVDDM------CFNYAKKN----VEQNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESCHH------HHHHHHHH----HHHTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECCHH------HHHHHHHH----HHHcCCCccEEEEE
Confidence 34589999999997655555543 2368999997542 34444443 4455664 66654
No 182
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=22.59 E-value=3.6e+02 Score=27.53 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=40.1
Q ss_pred ceeEE-EEecc--------------cCcc---chHHHHHHHhcCCCCCCeEEEEeecCC-CCCCCCCchHHHHHHHHHHH
Q 008984 283 HIIHI-IDFQI--------------AQGT---QWMFLLHALAKRPGGSPLVRITGIDDS-QSTHARGGGLDIVGKRLSEF 343 (547)
Q Consensus 283 ~rVHI-IDf~I--------------~~G~---QWpsLiqaLA~RpggPP~LRITgI~~~-~s~~~~~~~L~~tG~rL~~f 343 (547)
-+||| ||-|+ -.|+ ++..+++.++.. |.|+|.||..- .+.......+...-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 46888 88775 3565 667777777654 47999999753 22111112334444555555
Q ss_pred HHh----CCCceEEE
Q 008984 344 AAS----CNVPFEFQ 354 (547)
Q Consensus 344 A~s----~gvpFeF~ 354 (547)
++. .|+++++-
T Consensus 209 ~~~l~~~~g~~~~~l 223 (428)
T 2j66_A 209 GRNIYERYGIVCECI 223 (428)
T ss_dssp HHHHHHHHCCCCSEE
T ss_pred HHHHHHHhCCCCCEE
Confidence 543 47766654
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=22.00 E-value=4.9e+02 Score=24.77 Aligned_cols=30 Identities=10% Similarity=0.077 Sum_probs=20.4
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecC
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDD 322 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~ 322 (547)
-.|+|+|.|.|.- + ..|+.+ |. -++||||.
T Consensus 81 ~~vLDlG~G~G~~--~--~~~a~~--~~--~~v~~~D~ 110 (281)
T 3bzb_A 81 KTVCELGAGAGLV--S--IVAFLA--GA--DQVVATDY 110 (281)
T ss_dssp CEEEETTCTTSHH--H--HHHHHT--TC--SEEEEEEC
T ss_pred CeEEEecccccHH--H--HHHHHc--CC--CEEEEEeC
Confidence 4799999988852 2 245554 21 38999997
No 184
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=21.94 E-value=4.5e+02 Score=23.83 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=22.0
Q ss_pred eeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 008984 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDS 323 (547)
Q Consensus 284 rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~ 323 (547)
.-+|+|+|.|.|.- ...|+.+-| |.-+++|||.+
T Consensus 78 ~~~vLDlG~G~G~~----~~~la~~~g--~~~~v~gvD~s 111 (233)
T 2ipx_A 78 GAKVLYLGAASGTT----VSHVSDIVG--PDGLVYAVEFS 111 (233)
T ss_dssp TCEEEEECCTTSHH----HHHHHHHHC--TTCEEEEECCC
T ss_pred CCEEEEEcccCCHH----HHHHHHHhC--CCcEEEEEECC
Confidence 34799999999863 333443321 23489999865
No 185
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=21.65 E-value=2.7e+02 Score=27.06 Aligned_cols=135 Identities=10% Similarity=0.071 Sum_probs=68.7
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCC-CceEEEEeccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCN-VPFEFQDTAMTACEV 363 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~g-vpFeF~~V~~~~~ev 363 (547)
-.|+|+|.|.|. +...|+.+. |..+||+|+.+. ..++.+.+++.+++..++ -.+++..- +..+.
T Consensus 92 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid~------~~~~~a~~~~~~~~~~~~~~~v~~~~~--D~~~~ 156 (296)
T 1inl_A 92 KKVLIIGGGDGG----TLREVLKHD---SVEKAILCEVDG------LVIEAARKYLKQTSCGFDDPRAEIVIA--NGAEY 156 (296)
T ss_dssp CEEEEEECTTCH----HHHHHTTST---TCSEEEEEESCH------HHHHHHHHHCHHHHGGGGCTTEEEEES--CHHHH
T ss_pred CEEEEEcCCcCH----HHHHHHhcC---CCCEEEEEECCH------HHHHHHHHHhHhhccccCCCceEEEEC--cHHHH
Confidence 479999999885 455666653 357999999754 235666666655544332 23444322 21111
Q ss_pred ccccccccCCceEEEeeccc-ccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecCCCCCCCCh-hHHHHHHHHHHHH
Q 008984 364 ERQHLRVQPGEAVVVNFPFV-LHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVEQESKTNTSPF-FHRFLETLDYYTA 440 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~-LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvEqEan~ns~~F-~~RF~EaL~yYsA 440 (547)
- ... -..=++|++|.... .. +.... ....+++.+ +.|+|.-+++++.. ++.+ ...+.+.+.....
T Consensus 157 l-~~~-~~~fD~Ii~d~~~~~~~--~~~~l----~~~~~l~~~~~~LkpgG~lv~~~~----~~~~~~~~~~~~~~~l~~ 224 (296)
T 1inl_A 157 V-RKF-KNEFDVIIIDSTDPTAG--QGGHL----FTEEFYQACYDALKEDGVFSAETE----DPFYDIGWFKLAYRRISK 224 (296)
T ss_dssp G-GGC-SSCEEEEEEEC------------C----CSHHHHHHHHHHEEEEEEEEEECC----CTTTTHHHHHHHHHHHHH
T ss_pred H-hhC-CCCceEEEEcCCCcccC--chhhh----hHHHHHHHHHHhcCCCcEEEEEcc----CcccCHHHHHHHHHHHHH
Confidence 0 000 01124666664321 11 00000 013455554 77899977777522 2212 4556666666666
Q ss_pred Hhhhhh
Q 008984 441 MFESID 446 (547)
Q Consensus 441 lFDSLD 446 (547)
.|....
T Consensus 225 ~F~~v~ 230 (296)
T 1inl_A 225 VFPITR 230 (296)
T ss_dssp HCSEEE
T ss_pred HCCceE
Confidence 776544
No 186
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=21.57 E-value=32 Score=35.79 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=17.5
Q ss_pred HHhhhccceeEEEEecc--cCccchH
Q 008984 276 GEAVENEHIIHIIDFQI--AQGTQWM 299 (547)
Q Consensus 276 LEA~~ge~rVHIIDf~I--~~G~QWp 299 (547)
..+.+..+||=|||||+ +.|+|+.
T Consensus 198 ~~l~~~~~RV~ivD~DvHHGnGtq~i 223 (362)
T 3men_A 198 QALRARHARVAVLDTDMHHGQGIQEI 223 (362)
T ss_dssp HHHTTTCSCEEEEECSSSCCHHHHHH
T ss_pred HHHHHcCCeEEEEeCcCCCchhHhHH
Confidence 34444469999999999 4558865
No 187
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=20.71 E-value=1.2e+02 Score=30.22 Aligned_cols=135 Identities=10% Similarity=0.160 Sum_probs=65.0
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhC-CCceEEEEeccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC-NVPFEFQDTAMTACEV 363 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~-gvpFeF~~V~~~~~ev 363 (547)
-+|+|+|.|.|. +...|+.++ |..++|+|+.+.. .++.+.+++.+++..+ +-.++|.. .+..+.
T Consensus 118 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDis~~------~l~~ar~~~~~~~~~~~~~~v~~~~--~D~~~~ 182 (321)
T 2pt6_A 118 KNVLVVGGGDGG----IIRELCKYK---SVENIDICEIDET------VIEVSKIYFKNISCGYEDKRVNVFI--EDASKF 182 (321)
T ss_dssp CEEEEEECTTCH----HHHHHTTCT---TCCEEEEEESCHH------HHHHHHHHCTTTSGGGGSTTEEEEE--SCHHHH
T ss_pred CEEEEEcCCccH----HHHHHHHcC---CCCEEEEEECCHH------HHHHHHHHHHhhccccCCCcEEEEE--ccHHHH
Confidence 579999999885 455666553 4579999997542 3444444433321112 11244432 222111
Q ss_pred ccccccccCCceEEEeecccccCCCCCCccccchHHHHHHHH-HhcCCcEEEEEecCCCCCCCChhHHHHHHHHHHHHHh
Q 008984 364 ERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLV-KSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMF 442 (547)
Q Consensus 364 ~~~~L~i~~gEaLaVN~~~~LHhl~desvs~~n~rd~~L~~V-k~L~PkvvtlvEqEan~ns~~F~~RF~EaL~yYsAlF 442 (547)
- ... -..=++|++|.....+ +.+ .-....+++.+ +.|+|.-+++++.+..... ...+.+.+......|
T Consensus 183 l-~~~-~~~fDvIi~d~~~p~~--~~~----~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F 251 (321)
T 2pt6_A 183 L-ENV-TNTYDVIIVDSSDPIG--PAE----TLFNQNFYEKIYNALKPNGYCVAQCESLWIH---VGTIKNMIGYAKKLF 251 (321)
T ss_dssp H-HHC-CSCEEEEEEECCCSSS--GGG----GGSSHHHHHHHHHHEEEEEEEEEEECCTTTC---HHHHHHHHHHHHTTC
T ss_pred H-hhc-CCCceEEEECCcCCCC--cch----hhhHHHHHHHHHHhcCCCcEEEEEcCCcccC---HHHHHHHHHHHHHHC
Confidence 0 000 0112466667532111 000 00014566555 6789998887764332222 234444444445556
Q ss_pred hhh
Q 008984 443 ESI 445 (547)
Q Consensus 443 DSL 445 (547)
...
T Consensus 252 ~~v 254 (321)
T 2pt6_A 252 KKV 254 (321)
T ss_dssp SEE
T ss_pred CCe
Confidence 544
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=20.26 E-value=5.3e+02 Score=24.06 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=22.9
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ 324 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~ 324 (547)
-+|+|+|.+.|.-=..|.+++ |+.-+||+|+.+.
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~------~~~~~v~~iD~s~ 114 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAI------PEDGKILAMDINK 114 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHS------CTTCEEEEEESCC
T ss_pred CEEEEeCCCcCHHHHHHHHhC------CCCCEEEEEECCH
Confidence 479999998886444344433 2246999999764
No 189
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=20.08 E-value=1.4e+02 Score=28.30 Aligned_cols=56 Identities=9% Similarity=0.081 Sum_probs=33.5
Q ss_pred CchhhHHHHHHHHHHHHhhh-ccceeEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCC
Q 008984 261 CPYWKFAYMSANVVIGEAVE-NEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQS 325 (547)
Q Consensus 261 sP~~kFa~~tANqAILEA~~-ge~rVHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s 325 (547)
.||+.=+.+---. +++.+. ....-.|+|+|.|.|. +...|+.+ |+ -++||||.+..
T Consensus 15 ~~yvsrg~~kL~~-~L~~~~~~~~g~~VLDiGcGtG~----~t~~la~~--g~--~~V~gvDis~~ 71 (232)
T 3opn_A 15 LRYVSRGGLKLEK-ALKEFHLEINGKTCLDIGSSTGG----FTDVMLQN--GA--KLVYALDVGTN 71 (232)
T ss_dssp CCSSSTTHHHHHH-HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHT--TC--SEEEEECSSCC
T ss_pred CCccCCcHHHHHH-HHHHcCCCCCCCEEEEEccCCCH----HHHHHHhc--CC--CEEEEEcCCHH
Confidence 4666555443332 334443 2233479999999985 44556655 22 29999997653
No 190
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=20.01 E-value=47 Score=33.26 Aligned_cols=84 Identities=19% Similarity=0.278 Sum_probs=46.6
Q ss_pred eEEEEecccCccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCCCchHHHHHHHHHHHHHhCCCceEEEEecccccccc
Q 008984 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVE 364 (547)
Q Consensus 285 VHIIDf~I~~G~QWpsLiqaLA~RpggPP~LRITgI~~~~s~~~~~~~L~~tG~rL~~fA~s~gvpFeF~~V~~~~~ev~ 364 (547)
-+|+|.+.|.|..-..|++.+ |..+++|||.+. ..++.+.+++.. .|-.++|..- +..++.
T Consensus 28 ~~vLD~g~G~G~~s~~la~~~-------~~~~VigvD~d~------~al~~A~~~~~~----~g~~v~~v~~--d~~~l~ 88 (301)
T 1m6y_A 28 KIILDCTVGEGGHSRAILEHC-------PGCRIIGIDVDS------EVLRIAEEKLKE----FSDRVSLFKV--SYREAD 88 (301)
T ss_dssp CEEEETTCTTSHHHHHHHHHC-------TTCEEEEEESCH------HHHHHHHHHTGG----GTTTEEEEEC--CGGGHH
T ss_pred CEEEEEeCCcCHHHHHHHHHC-------CCCEEEEEECCH------HHHHHHHHHHHh----cCCcEEEEEC--CHHHHH
Confidence 479999999998776666654 135899999764 246666666543 3334555432 322221
Q ss_pred --cccccccCCceEEEeecccccCC
Q 008984 365 --RQHLRVQPGEAVVVNFPFVLHHM 387 (547)
Q Consensus 365 --~~~L~i~~gEaLaVN~~~~LHhl 387 (547)
+..+++..=+.|+++..+..+++
T Consensus 89 ~~l~~~g~~~~D~Vl~D~gvSs~ql 113 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDLGVSTYQL 113 (301)
T ss_dssp HHHHHTTCSCEEEEEEECSCCHHHH
T ss_pred HHHHhcCCCCCCEEEEcCccchhhh
Confidence 11112122245666765544443
Done!