BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008986
(547 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5 OS=Danio rerio GN=alkbh5 PE=2 SV=1
Length = 352
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 295 GNLEPIPALLQS-VIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G ++ IP + VID LV +IPE +P GCI++ D P
Sbjct: 127 GEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVD----------PI 176
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + + L L ++ GS+ V+ G +AD H +
Sbjct: 177 HIFERPIVSVSFFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDITHCI 236
Query: 403 CPS--PNKRISITFFRVRPESNQSQSPPTTPT 432
P +R I + R ++ + S +P+
Sbjct: 237 RPQDIKERRAVIILRKTRADAPRLDSNSLSPS 268
>sp|D3ZKD3|ALKB5_RAT RNA demethylase ALKBH5 OS=Rattus norvegicus GN=Alkbh5 PE=3 SV=1
Length = 395
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 295 GNLEPIPALL-QSVIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G+++ IP + Q VI LV+ ++IPE +P GCI++ D P
Sbjct: 160 GDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD----------PI 209
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + L L ++ GS+ V+ G +AD H +
Sbjct: 210 HIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCI 269
Query: 403 CP 404
P
Sbjct: 270 RP 271
>sp|Q6P6C2|ALKB5_HUMAN RNA demethylase ALKBH5 OS=Homo sapiens GN=ALKBH5 PE=1 SV=2
Length = 394
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 295 GNLEPIPALL-QSVIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G+++ IP + Q VI LV+ ++IPE +P GCI++ D P
Sbjct: 159 GDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD----------PI 208
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + L L ++ GS+ V+ G +AD H +
Sbjct: 209 HIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCI 268
Query: 403 CP 404
P
Sbjct: 269 RP 270
>sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5 OS=Mus musculus GN=Alkbh5 PE=1 SV=2
Length = 395
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 295 GNLEPIPALL-QSVIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G+++ IP + Q VI LV+ ++IPE +P GCI++ D P
Sbjct: 160 GDVDEIPDWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD----------PI 209
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + L L ++ GS+ V+ G +AD H +
Sbjct: 210 HIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCI 269
Query: 403 CP 404
P
Sbjct: 270 RP 271
>sp|E1BH29|ALKB5_BOVIN RNA demethylase ALKBH5 OS=Bos taurus GN=ALKBH5 PE=3 SV=1
Length = 394
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 295 GNLEPIPALL-QSVIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G+++ IP + Q VI LV+ ++IPE +P GCI++ D P
Sbjct: 159 GDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD----------PI 208
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + L L ++ GS+ V+ G +AD H +
Sbjct: 209 HIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAADEITHCI 268
Query: 403 CP 404
P
Sbjct: 269 RP 270
>sp|Q66JG8|ALKB5_XENTR RNA demethylase ALKBH5 OS=Xenopus tropicalis GN=alkbh5 PE=2 SV=1
Length = 358
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 295 GNLEPIPALLQS-VIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G ++ IPA + VI LV+ ++IPE +P GCI++ D P
Sbjct: 125 GEVDEIPAWVNELVIRRLVEHRVIPEGFVNSAVINDYQPGGCIVSHVD----------PI 174
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + L ++ GS+ V+ G +AD H +
Sbjct: 175 HIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVQRGSVTVLSGYAADEITHCI 234
Query: 403 CP 404
P
Sbjct: 235 RP 236
>sp|Q6GPB5|ALKB5_XENLA RNA demethylase ALKBH5 OS=Xenopus laevis GN=alkbh5 PE=2 SV=1
Length = 360
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 295 GNLEPIPALLQS-VIDHLVQWQLIPE---------YKKPNGCIINFFDEAEYSQPFLKPP 344
G ++ IP + VI LV+ ++IPE +P GCI++ D P
Sbjct: 127 GEVDEIPGWVHELVIRRLVERRIIPEGFVNSAVINDYQPGGCIVSHVD----------PI 176
Query: 345 HL-DQPI-STLLLSDSAMAFGRSLVCDNDGNYKGQLMLSLKEGSLVVMRGNSADTARHVM 402
H+ ++PI S SDSA+ FG + L ++ GS+ V+ G +AD H +
Sbjct: 177 HIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVRRGSVTVLSGYAADEITHCI 236
Query: 403 CPS--PNKRISITFFRVRPESNQSQSPPTTPTGTMNGAMALWQP 444
P +R + + R E+ P M + +QP
Sbjct: 237 RPQDIKERRAVVILRKTRTEA---------PRLEMKSLSSSYQP 271
>sp|Q9ZD49|SCA4_RICPR Antigenic heat-stable 120 kDa protein OS=Rickettsia prowazekii
(strain Madrid E) GN=sca4 PE=4 SV=2
Length = 1022
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 48 AANAIIDALCGHLAEVRGGGGIGSGYEKVFAAIHRRRMNWISVLQMQKYHSIAEVTLELR 107
ANA+ + + L + G G+ K +++ +N IS ++K +++ + +
Sbjct: 817 VANALKNVITTVLDDNSGQRGVSEEAPKKVSSL----LNDISKRTIEKINNLRAMLSQDG 872
Query: 108 NVTEKMVEEKKDDGEKKVDELKECLDSEKSTENGEKMTES 147
N+ K EEKKD+ KKVDEL + D++ STE + +S
Sbjct: 873 NL--KTFEEKKDEATKKVDELVKAFDNKSSTEEQQNFIKS 910
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 34.7 bits (78), Expect = 1.9, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 105 ELRNVTEKMVEEKKD---------DGEKKVDELKECLDSEKSTENGEKMTESEKKCEVEE 155
EL++V E++ EEKK D EK+V ELK+ ++ E +++ +++K+ E++E
Sbjct: 1291 ELKHVNEQLEEEKKQKESNEKRKVDLEKEVSELKDQIEEEVASKKAVTEAKNKKESELDE 1350
Query: 156 ETAVEEDDSPNSDIT-------DSGSQEMQPITENVEICSNHEECDARRSQIKLTKGFAA 208
D + D + + ++E++ E E + E ++++ L +
Sbjct: 1351 IKRQYADVVSSRDKSVEQLKTLQAKNEELRNTAEEAEGQLDRAERSKKKAEFDLEEAVKN 1410
Query: 209 KEQVKGHMVNVVKGLKLYEDVF--TDSEL 235
E+ V K +K E + T SEL
Sbjct: 1411 LEEETAKKVKAEKAMKKAETDYRSTKSEL 1439
>sp|Q9H3S7|PTN23_HUMAN Tyrosine-protein phosphatase non-receptor type 23 OS=Homo sapiens
GN=PTPN23 PE=1 SV=1
Length = 1636
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 431 PTGTMNGAMALWQPGVPSPYSVPNG-APSGYEAMDMTP----------KWGVLRAPVVML 479
P GT +G L QP P P+++P P+ Y A TP + GV+ +P V +
Sbjct: 792 PPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGV 851
Query: 480 APVRPMALSPGRMPHGGTGVFLPWAV 505
P P+A P P +G L AV
Sbjct: 852 GPAPPVAGLPSAPPPQFSGPELAMAV 877
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 34.3 bits (77), Expect = 2.6, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 26/141 (18%)
Query: 101 EVTLELRNVTEKMVEEKKDDGEKKVDELKECLDSEKSTENG---EKMTESEKKCE--VEE 155
E +E EK VE+ +D EK V EK+TE+ EK TE EK E E+
Sbjct: 4138 EKAIEKNTEDEKAVEKNTED-EKAV---------EKNTEDEKAIEKNTEDEKAVEKNTED 4187
Query: 156 ETAVEEDDSPNSDITDSGSQEMQPITENVE----ICSNHEECDARRSQIKLTKGFAAKEQ 211
E AVE+ ++ + + + +++ + + +N E + N E+ +I+ KG E+
Sbjct: 4188 EKAVEQ-NTEDEKVVEENTEDEKAVEKNTEDEKAVEKNTEDEKVVEEKIEDEKG----EE 4242
Query: 212 VKGHMVNVVKGLKLYEDVFTD 232
K NV G++ E V D
Sbjct: 4243 QKAEEENV--GIEEVEKVQID 4261
>sp|Q8BYR2|LATS1_MOUSE Serine/threonine-protein kinase LATS1 OS=Mus musculus GN=Lats1 PE=1
SV=3
Length = 1129
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 149 KKCEVEEETAVEEDDSPNS-DITDSGSQEMQPITEN-VEICSNHEECDARRSQIKLTKGF 206
K C+ E+ + +EDDS S D DSG +E + IT + + + N ++ + R S+I+
Sbjct: 577 KPCKDEQPSLPKEDDSEKSADSGDSGDKEKKQITTSPITVRKNKKDEERRESRIQSYSPQ 636
Query: 207 AAKEQVKGHMVNVVK 221
A K ++ H+ NV+K
Sbjct: 637 AFKFFMEQHVENVLK 651
>sp|Q9AJ63|SCA4_RICTY Antigenic heat-stable 120 kDa protein OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=sca4 PE=4 SV=2
Length = 1019
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 85 MNWISVLQMQKYHSIAEVTLELRNVTEKMVEEKKDDGEKKVDELKECLDSEKSTENGEKM 144
+N IS ++K +++ + + N+ K EEKKD+ KKVDEL + D++ STE +
Sbjct: 847 LNDISQRTIEKVNNLRAMLSQDANL--KTFEEKKDESTKKVDELVKAFDNKSSTEEQQNF 904
Query: 145 TES 147
+S
Sbjct: 905 IKS 907
>sp|Q4I1B1|VAC8_GIBZE Vacuolar protein 8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620
/ FGSC 9075 / NRRL 31084) GN=VAC8 PE=3 SV=4
Length = 559
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 34/82 (41%)
Query: 225 LYEDVFTDSELSMLTDYVNELRLAGQSGELSGETFILFNKQMKGNRRELIRFGIPIFRHI 284
LYE V DSE + D + L G++ SGE + + +L R F I
Sbjct: 17 LYEPVLADSEREAVADLLQYLENRGETDFFSGEPLRALSTLVFSENIDLQRSASLTFAEI 76
Query: 285 KEEATSNNEIGNLEPIPALLQS 306
E + LEPI LLQS
Sbjct: 77 TERDVREVDRDTLEPILFLLQS 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,828,469
Number of Sequences: 539616
Number of extensions: 9603402
Number of successful extensions: 37675
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 436
Number of HSP's that attempted gapping in prelim test: 33768
Number of HSP's gapped (non-prelim): 2953
length of query: 547
length of database: 191,569,459
effective HSP length: 123
effective length of query: 424
effective length of database: 125,196,691
effective search space: 53083396984
effective search space used: 53083396984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)