Your job contains 1 sequence.
>008988
MQTSQKHQSAASVQRMYHQPVQGIEPCCLSHVQILDNNICSDVSSQGTNMSFQTYKEQFY
TLDSSTATTGFSHDSPSAVSISSNRSTFSPQGSQSYQSDPHHSPDNAYGSPMSGSSIVDE
GNELRNKLRELEISLLGPESDIIDSCSCCFKSGTHQDTSAASWNWDQLMEMIPRLDLKQV
LIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKIYKAL
KCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMF
LLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTA
CEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQES
KTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERV
ERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAM
ATSSAWK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008988
(547 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 1410 2.8e-144 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 1338 1.2e-136 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 1182 4.1e-120 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 1014 2.6e-102 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 608 2.7e-59 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 560 3.4e-54 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 545 1.3e-52 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 542 2.7e-52 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 542 2.7e-52 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 536 1.2e-51 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 531 4.0e-51 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 530 5.1e-51 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 526 1.3e-50 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 511 5.2e-49 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 500 7.7e-48 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 488 1.4e-46 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 480 1.0e-45 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 275 1.8e-44 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 455 4.5e-43 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 423 1.1e-39 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 377 5.6e-39 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 400 3.0e-37 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 387 1.5e-34 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 336 5.0e-30 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 345 7.2e-30 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 281 2.6e-21 2
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 271 1.4e-20 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 265 6.1e-20 2
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 263 1.6e-19 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 253 1.0e-18 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 235 9.0e-17 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 234 1.0e-16 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 202 2.4e-15 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 197 8.2e-15 1
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 1410 (501.4 bits), Expect = 2.8e-144, P = 2.8e-144
Identities = 268/452 (59%), Positives = 343/452 (75%)
Query: 98 SDPHHSPDNAYGSPMSGSSIVDEGNELRNKLRELEISLLGPES-DIIDSCSCCFKSGTHQ 156
S P+++ A GS + DE N+ ++K+RE+E ++GP+S D++ C+ F S Q
Sbjct: 43 SPPYNALSTATYDDTCGSCVTDELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQ 102
Query: 157 DTSAASWNWDQLMEMIPRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIER 216
+ + W +E I R DL+ L+ CA+A+S+ D+ A +M L QMVSVSGEPI+R
Sbjct: 103 EING----WRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQR 158
Query: 217 LGAYMLEGLRARLEFSGSKIYKAL-KCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVI 275
LGAY+LEGL A+L SGS IYKAL +C +P S+EL+SYM +L+++CPY+KF YMSAN I
Sbjct: 159 LGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAI 218
Query: 276 GEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDI 335
EA++ E+ +HIIDFQI QG+QW+ L+ A A RPGG P +RITGIDD S +ARGGGL I
Sbjct: 219 AEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSI 278
Query: 336 VGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTE 395
VG RL++ A NVPFEF +++ EV+ ++L V+PGEA+ VNF FVLHHMPDESVSTE
Sbjct: 279 VGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTE 338
Query: 396 NHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQ 455
NHRDRLLR+VKSLSPKVVTLVEQES TNT+ FF RF+ET++YY AMFESIDVT PRD KQ
Sbjct: 339 NHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQ 398
Query: 456 RISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVL 515
RI+ EQHC+ARD+VN+IACEG +RVERHELLGKWRSRF MAGFTPY LSPLV + ++ +L
Sbjct: 399 RINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL 458
Query: 516 KDYDSNYRVEENDGALYLGWRNRAMATSSAWK 547
++Y YR+EE DGALYLGW +R + S AWK
Sbjct: 459 RNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 281/554 (50%), Positives = 366/554 (66%)
Query: 2 QTSQKHQSAASVQRMYHQPVQGIEPCCLSH-VQILDNNICSDVSS-QGTNMSFQTYKEQF 59
Q + QS + Y+QP H +Q + SS + ++S QT+ + +
Sbjct: 49 QRISQTQSPICLSANYYQPDNLDMEATQKHMIQEGSSMFYHQPSSVKQMDLSVQTF-DSY 107
Query: 60 YTLDSSTATTGF-----SHDSPSAVSISSNRSTFSPQGSQSYQSDPHHSPDNAYGSPMSG 114
TL+SS+ T ++S S S SSN S S + + +HSP+ SP+SG
Sbjct: 108 CTLESSSGTKSHPCLNNKNNSSSTTSFSSNESPISQANNNNLSRFNNHSPEENNNSPLSG 167
Query: 115 SSIVDEGN-ELRNKLRELEISLLGPESDIIDSCSCCFKSGTHQDTSAASWNWDQLMEMIP 173
SS + EL L++LE +++ P+ +D+ S + G Q S + MEMI
Sbjct: 168 SSATNTNETELSLMLKDLETAMMEPD---VDN-SYNNQGGFGQQHGVVSSAMYRSMEMIS 223
Query: 174 RLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSG 233
R DLK VL CA+AV + D+ L+ L+QMVSVSGEP++RLGAYMLEGL ARL SG
Sbjct: 224 RGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSG 283
Query: 234 SKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIA 293
S IYKAL+C+ P EL++YM +L++ CPY+KF Y SAN I EAV+NE +HIIDFQI+
Sbjct: 284 SSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQIS 343
Query: 294 QGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353
QG QW+ L+ AL RPGG P VRITGIDD +S+ AR GGL++VG+RL + A C VPFEF
Sbjct: 344 QGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEF 403
Query: 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVV 413
A+ EVE + L V+ GEA+ VNFP VLHHMPDESV+ ENHRDRLLRLVK LSP VV
Sbjct: 404 HGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVV 463
Query: 414 TLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIA 473
TLVEQE+ TNT+PF RF+ET+++Y A+FESIDV RD K+RI+ EQHC+AR++VN+IA
Sbjct: 464 TLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIA 523
Query: 474 CEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYL 533
CEG+ER ERHE LGKWRSRF MAGF PY LS V ++ +L+ Y Y +EE DGALYL
Sbjct: 524 CEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYL 583
Query: 534 GWRNRAMATSSAWK 547
GW+N+ + TS AW+
Sbjct: 584 GWKNQPLITSCAWR 597
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 1182 (421.1 bits), Expect = 4.1e-120, P = 4.1e-120
Identities = 230/380 (60%), Positives = 287/380 (75%)
Query: 168 LMEMIPRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRA 227
++E I R DLK VL+ CA+AVS+ ++ A M L MVS+SGEPI+RLGAYMLEGL A
Sbjct: 41 IVEAISRGDLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVA 100
Query: 228 RLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHI 287
RL SGS IYK+L+ +P S E +SY+ VL ++CPY+KF YMSAN I EA+++E IHI
Sbjct: 101 RLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHI 160
Query: 288 IDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASC 347
IDFQI QG+QW+ L+ A A RPGG+P +RITG+ D G L V KRL + A
Sbjct: 161 IDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGD-------GSVLVTVKKRLEKLAKKF 213
Query: 348 NVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKS 407
+VPF F + +CEVE ++L V+ GEA+ VNF ++LHH+PDESVS ENHRDRLLR+VKS
Sbjct: 214 DVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKS 273
Query: 408 LSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARD 467
LSPKVVTLVEQE TNTSPF RFLETL YYTAMFESIDV PR+ K+RI+ EQHC+ARD
Sbjct: 274 LSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARD 333
Query: 468 IVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEEN 527
+VN+IACEG ER+ERHELLGKW+SRF MAGF PY LS +++ +R +L+DY + Y +EE
Sbjct: 334 VVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEER 393
Query: 528 DGALYLGWRNRAMATSSAWK 547
DGALYLGW +R + +S AWK
Sbjct: 394 DGALYLGWMDRILVSSCAWK 413
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
Identities = 202/444 (45%), Positives = 298/444 (67%)
Query: 120 EGNELRNKLRELEISLLGPESDI---------IDS-CSCCFKSGTHQDTSAASWNWDQ-- 167
+ ++R+K++ELE +LLG E D IDS S +S HQD+ S + D
Sbjct: 150 DDEQMRSKIQELERALLGDEDDKMVGIDNLMEIDSEWSYQNESEQHQDSPKESSSADSNS 209
Query: 168 ---LMEMIPRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEG 224
E++ + KQ+LI CA+A+S+G + A ++ L Q+VS+ G+P +R+ AYM+EG
Sbjct: 210 HVSSKEVVSQATPKQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEG 269
Query: 225 LRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHI 284
L AR+ SG IY+ALKC++P S E ++ M VLF++CP +KF +++AN I EA++ E
Sbjct: 270 LAARMAASGKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEE 329
Query: 285 IHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFA 344
+HIIDF I QG Q+M L+ ++A+ PG P +R+TGIDD +S GGL I+G RL + A
Sbjct: 330 VHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLA 389
Query: 345 ASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRL 404
V F+F+ V L +PGE ++VNF F LHHMPDESV+T N RD LL +
Sbjct: 390 EDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHM 449
Query: 405 VKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCV 464
VKSL+PK+VT+VEQ+ TNTSPFF RF+E +YY+A+FES+D+T PR+ ++R++ E+ C+
Sbjct: 450 VKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCL 509
Query: 465 ARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKD-YDSNYR 523
ARDIVN++ACEG ER+ER+E GKWR+R MMAGF P +S VTN +++++K Y + Y+
Sbjct: 510 ARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYK 569
Query: 524 VEENDGALYLGWRNRAMATSSAWK 547
++E G L+ W +++ +SAW+
Sbjct: 570 LKEEMGELHFCWEEKSLIVASAWR 593
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 137/374 (36%), Positives = 207/374 (55%)
Query: 176 DLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSK 235
DL+ +L+ CAQAVS D TA ++R + + S G ERL Y L ARL +G++
Sbjct: 392 DLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQ 451
Query: 236 IYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQG 295
IY AL ++ +++++ +CP+ K A + AN + N + IHIIDF I+ G
Sbjct: 452 IYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYG 511
Query: 296 TQWMFLLHALA-KRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354
QW L+H L+ RPGGSP +RITGI+ Q G+ G RL+ + NVPFE+
Sbjct: 512 FQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYN 571
Query: 355 DTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT 414
A ++ + L+++ GE VVVN F ++ DE+V + RD +L+L++ ++P V
Sbjct: 572 AIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFI 631
Query: 415 LVEQESKTNTSPFF-HRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIA 473
N +PFF RF E L +Y+A+F+ D R+D+ R+ E+ R+IVN++A
Sbjct: 632 PAILSGNYN-APFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVA 690
Query: 474 CEGIERVERHELLGKWRSRFMMAGFTPYRLSP-LVTNAVRDVLKDYDSNYRVEENDGALY 532
CEG ERVER E +W++R + AGF L L+ N + YD N+ V++N L
Sbjct: 691 CEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLL 750
Query: 533 LGWRNRAMATSSAW 546
GW+ R + SS W
Sbjct: 751 QGWKGRIVYASSLW 764
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 135/380 (35%), Positives = 208/380 (54%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKI 236
L L+ CA+A+ +++ A L++ + + + ++ Y + L AR +I
Sbjct: 180 LVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQAL-AR------RI 232
Query: 237 YKALKCEQPVSSELM-SYMSVL----FQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQ 291
Y+ E V + + S+ VL ++ CPY KFA+ +AN I EAV +H+ID
Sbjct: 233 YRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQAILEAVTTARRVHVIDLG 292
Query: 292 IAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351
+ QG QW L+ ALA RPGG P R+TGI Q+ ++ L +G +L++FA + V F
Sbjct: 293 LNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENS--DSLQQLGWKLAQFAQNMGVEF 350
Query: 352 EFQDTAMTAC-EVERQHLRVQP-GEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLS 409
EF+ A + ++E + +P E +VVN F LH + S S E +LL VK++
Sbjct: 351 EFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIE----KLLNTVKAIK 406
Query: 410 PKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIV 469
P +VT+VEQE+ N F RF E L YY+++F+S++ + + R+ +E + + R I+
Sbjct: 407 PSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVY-LGRQIL 465
Query: 470 NMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN--YRVEEN 527
N++A EG +RVERHE +WR R AGF P L +L Y + YRVEEN
Sbjct: 466 NVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEEN 525
Query: 528 DGALYLGWRNRAMATSSAWK 547
DG L +GW+ R + T+SAWK
Sbjct: 526 DGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 151/506 (29%), Positives = 240/506 (47%)
Query: 49 NMSFQTYKEQFY-TLDSSTATTGFSHDSPSAVSISSNRSTFSPQGSQSYQSDPHHSPDNA 107
+++ Q + F+ L T +G D S + SS S P+ S+ H D+
Sbjct: 85 SLALQAAERSFFEVLQDQTPISGDLEDG-SLGNFSSITSLHQPEVSEESTRRYRHRDDDE 143
Query: 108 YGSPMSG--SSI--VDEGNELRNKLRELEISLLGPESDIIDSCSCCFKSGTHQDTSAASW 163
SG S + + +EL K E+ LL + + D K H +S
Sbjct: 144 DDDLESGRKSKLPAISTVDELAEKFEEV---LLVCQKN--DQGEATEKKTRH--VKGSSN 196
Query: 164 NWDQLMEMIPRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLE 223
+ Q P +D++ +L+ CAQAV+ D A ++ + + S G+ +RLG + E
Sbjct: 197 RYKQQKSDQP-VDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAE 255
Query: 224 GLRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEH 283
L AR+ + + A + L +Y + Q CP Y +AN I E
Sbjct: 256 ALEARITGTMTTPISATSSRTSMVDILKAYKGFV-QACPTLIMCYFTANRTINELASKAT 314
Query: 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEF 343
+HIIDF I G QW L+ AL+KR G PL+R+TGI+ QS ++ G+RL F
Sbjct: 315 TLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRF 374
Query: 344 AASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLR 403
NVPFE+ A + L + GE VVN L + PDE+VS + RD L+
Sbjct: 375 CDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALK 434
Query: 404 LVKSLSPKVVTLVEQESKTNTSPFF-HRFLETLDYYTAMFESIDVTRPRDDKQRISAEQH 462
L + ++P + E N SPFF RF E L + +++F+ + T DD R E+
Sbjct: 435 LFRDINPDLFVFAEINGTYN-SPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERE 493
Query: 463 CVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKD-YDSN 521
+ RD +++IACEG ER R E +W+ R + AGF P +LS + ++++K+ Y +
Sbjct: 494 LIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKD 553
Query: 522 YRVEENDGALYLGWRNRAMATSSAWK 547
+ ++ ++ ++ GW+ R + S WK
Sbjct: 554 FVIDNDNHWMFQGWKGRVLYAVSCWK 579
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 131/385 (34%), Positives = 209/385 (54%)
Query: 178 KQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKIY 237
+Q ++ A A+++G A ++ + Q ++ E+L +M+ LR+R+ +++Y
Sbjct: 266 RQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELY 325
Query: 238 KALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEH----IIHIIDFQIA 293
E +S++L L+++ P +K + +AN+ I +A +N I H+IDF I
Sbjct: 326 GK---EHLISTQL------LYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFDIG 376
Query: 294 QGTQWMFLLHALAKRPGG------SPLVRITGIDDS-QSTHARGGG---LDIVGKRLSEF 343
+G Q++ LL L+ R G SP+V+IT + ++ GG L VG LS+
Sbjct: 377 EGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLSQL 436
Query: 344 AASCNVPFEFQD-TAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLL 402
+ F T++ ++ R+ L P E + VN F L+ +PDESV TEN RD LL
Sbjct: 437 GDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCTENPRDELL 496
Query: 403 RLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQH 462
R VK L P+VVTLVEQE +NT+PF R E+ Y A+ ES++ T P + R E+
Sbjct: 497 RRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEG 556
Query: 463 CVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNY 522
+ R +VN +ACEGI+R+ER E+ GKWR R MAGF LS + +++ +
Sbjct: 557 -IGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGNRVHPGF 615
Query: 523 RVEENDGALYLGWRNRAMATSSAWK 547
V+E++G + GW RA+ +SAW+
Sbjct: 616 TVKEDNGGVCFGWMGRALTVASAWR 640
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 131/378 (34%), Positives = 208/378 (55%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQM-VSVSGEPIERLGAYMLEGLRARLEFSGSK 235
L L+ CA+AV +++ A L++ + + VS G + ++ Y E L AR +
Sbjct: 169 LVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGA-MRKVATYFAEAL-AR------R 220
Query: 236 IYKALKCEQPVSSELMSYMSVLF-QICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQ 294
IY+ + P+ L + + F + CPY KFA+ +AN I EA + + +H+IDF ++Q
Sbjct: 221 IYRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQ 280
Query: 295 GTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354
G QW L+ ALA RPGG P+ R+TGI + L VG +L+ A + +V FE++
Sbjct: 281 GLQWPALMQALALRPGGPPVFRLTGIGPPAPDNF--DYLHEVGCKLAHLAEAIHVEFEYR 338
Query: 355 D-TAMTACEVERQHLRVQPGE--AVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPK 411
A T +++ L ++P E +V VN F LH + + D++L +V + P+
Sbjct: 339 GFVANTLADLDASMLELRPSEIESVAVNSVFELHKL----LGRPGAIDKVLGVVNQIKPE 394
Query: 412 VVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNM 471
+ T+VEQES N+ F RF E+L YY+ +F+S++ DK + +E + + + I N+
Sbjct: 395 IFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDK--VMSEVY-LGKQICNV 451
Query: 472 IACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN--YRVEENDG 529
+AC+G +RVERHE L +WR+RF AGF + +L ++ YRVEE+DG
Sbjct: 452 VACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDG 511
Query: 530 ALYLGWRNRAMATSSAWK 547
L LGW R + +SAWK
Sbjct: 512 CLMLGWHTRPLIATSAWK 529
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 122/378 (32%), Positives = 194/378 (51%)
Query: 175 LDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGS 234
+DL+ +L CAQAV+ D A ++ + S +G+ +RL Y E L AR+ + S
Sbjct: 222 VDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNIS 281
Query: 235 K-IYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIA 293
+ +++ + CP + Y +AN I E +HI+DF +
Sbjct: 282 PPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVL 341
Query: 294 QGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF 353
G QW LL AL+KRPGG P++R+TGI+ Q+ ++ G+RL F NVPFEF
Sbjct: 342 YGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEF 401
Query: 354 QDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVV 413
A + L + PGE VVN L + PDE+VS ++ RD +L+L + ++P +
Sbjct: 402 NFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLF 461
Query: 414 TLVEQESKTNTSPFFH-RFLETLDYYTAMFESIDVTRPRDD--KQRISAEQHCVARDIVN 470
E N SPFF RF E L +Y+++F+ D T +D K R E+ + RD ++
Sbjct: 462 VFAEINGMYN-SPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMS 520
Query: 471 MIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVL-KDYDSNYRVEENDG 529
+I+CEG ER R E +WR R + AGF P +S + ++++ K Y ++ ++ ++
Sbjct: 521 VISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNN 580
Query: 530 ALYLGWRNRAMATSSAWK 547
+ GW+ R + S WK
Sbjct: 581 WMLQGWKGRVIYAFSCWK 598
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 128/376 (34%), Positives = 202/376 (53%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKI 236
L L+ CA+AV ++ A L++ + + S + ++ Y EGL AR +I
Sbjct: 152 LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGL-AR------RI 204
Query: 237 YKALKCEQPVSSELMSYMSVLF-QICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQG 295
Y+ + S + + F + CPY KFA+ +AN I E +H+ID + G
Sbjct: 205 YRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHG 264
Query: 296 TQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD 355
QW L+ ALA RP G P R+TGI S + + VG +L + A++ V FEF+
Sbjct: 265 LQWPALIQALALRPNGPPDFRLTGIGYSLTD------IQEVGWKLGQLASTIGVNFEFKS 318
Query: 356 TAMT-ACEVERQHLRVQPG-EAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVV 413
A+ +++ + L ++PG E+V VN F LH + ++ D+ L +KS+ P ++
Sbjct: 319 IALNNLSDLKPEMLDIRPGLESVAVNSVFELHRL----LAHPGSIDKFLSTIKSIRPDIM 374
Query: 414 TLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIA 473
T+VEQE+ N + F RF E+L YY+++F+S++ P D R+ +E + R I+N++A
Sbjct: 375 TVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQD--RVMSELF-LGRQILNLVA 430
Query: 474 CEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS--NYRVEENDGAL 531
CEG +RVERHE L +WR+RF + GF P + +L Y Y VEEN+G L
Sbjct: 431 CEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCL 490
Query: 532 YLGWRNRAMATSSAWK 547
LGW+ R + +SAW+
Sbjct: 491 LLGWQTRPLIATSAWR 506
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 149/471 (31%), Positives = 238/471 (50%)
Query: 93 SQSYQSDPHHSPDNAYGSPMSGSSIVDEGNELR-NKLRELEISLLGPESDIIDSCSCCFK 151
S ++ H++P + G S S ++ +L N++ +L P +D D C C
Sbjct: 71 SNAFNDTVHYNPSDLSGWAQSMLSDLNYYPDLDPNRICDLR-----PITDD-DEC-CSSN 123
Query: 152 SGTHQDTSAASWNWDQLMEMIPR---------LDLKQVLIFCAQAVSDGDISTAAGLMRV 202
S +++ W D + R + L Q L+ CA+AV ++S A L++
Sbjct: 124 SNSNKRIRLGPW-CDSVTSESTRSVVLIEETGVRLVQALVACAEAVQLENLSLADALVKR 182
Query: 203 LEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICP 262
+ + + + ++ Y E L R+ +I+ + P E++ M+ + CP
Sbjct: 183 VGLLAASQAGAMGKVATYFAEALARRIY----RIHPSAAAIDPSFEEILQ-MN-FYDSCP 236
Query: 263 YWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDD 322
Y KFA+ +AN I EAV ++H+ID + QG QW L+ ALA RPGG P R+TG+ +
Sbjct: 237 YLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGN 296
Query: 323 SQSTHARGGGLDIVGKRLSEFAASCNVPFEFQD-TAMTACEVERQHLRVQP-GEAVVVNF 380
+ G+ +G +L++ A + V F+F T ++E + E +VVN
Sbjct: 297 PSNRE----GIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNS 352
Query: 381 PFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTA 440
F LH + + S E +LL VK++ P +VT+VEQE+ N F RF E L YY++
Sbjct: 353 VFELHPVLSQPGSIE----KLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSS 408
Query: 441 MFESID--VTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGF 498
+F+S++ V P D R+ +E + + R I+N++A EG +R+ERHE L +WR R AGF
Sbjct: 409 LFDSLEDGVVIPSQD--RVMSEVY-LGRQILNLVATEGSDRIERHETLAQWRKRMGSAGF 465
Query: 499 TPYRL-SPLVTNA-VRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 547
P L S A + L YRVEENDG+L L W+ + + +SAWK
Sbjct: 466 DPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK 516
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 131/378 (34%), Positives = 206/378 (54%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQM-VSVSGEPIERLGAYMLEGLRARLEFSGSK 235
L L+ CA+A+ +++ A L++ + + VS +G + ++ Y E L AR +
Sbjct: 221 LVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGA-MRKVATYFAEAL-AR------R 272
Query: 236 IYKALKCEQPVSSELMSYMSVLF-QICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQ 294
IY+ + + L + + F + CPY KFA+ +AN I EA E + +H+IDF + Q
Sbjct: 273 IYRLSPPQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQ 332
Query: 295 GTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354
G QW L+ ALA R GG P R+TGI ++ L VG +L++ A + +V FE++
Sbjct: 333 GLQWPALMQALALREGGPPTFRLTGIGPPAPDNS--DHLHEVGCKLAQLAEAIHVEFEYR 390
Query: 355 D-TAMTACEVERQHLRVQPG--EAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPK 411
A + +++ L ++P EAV VN F LH + E ++L +VK + P
Sbjct: 391 GFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIE----KVLGVVKQIKPV 446
Query: 412 VVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNM 471
+ T+VEQES N F RF E+L YY+ +F+S++ DK + +E + + + I N+
Sbjct: 447 IFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDK--VMSEVY-LGKQICNL 503
Query: 472 IACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN--YRVEENDG 529
+ACEG +RVERHE L +W +RF +G P L +L ++S YRVEE++G
Sbjct: 504 VACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNG 563
Query: 530 ALYLGWRNRAMATSSAWK 547
L LGW R + T+SAWK
Sbjct: 564 CLMLGWHTRPLITTSAWK 581
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 118/375 (31%), Positives = 196/375 (52%)
Query: 175 LDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGS 234
+DL+ +LI CAQAV+ D A L++ + + G+ +RL GL ARL +GS
Sbjct: 342 VDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGS 401
Query: 235 KIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQ 294
+IYK + + ++ ++ + CP+ K +Y N I + V N +H+IDF I
Sbjct: 402 QIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILY 461
Query: 295 GTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354
G QW L+H + GSP VRITGI+ Q ++ G+RL+ +A VPFE++
Sbjct: 462 GFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYK 519
Query: 355 DTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT 414
A ++ + L + E VVN + ++ DESV E+ RD +L L+ ++P +
Sbjct: 520 AIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFV 579
Query: 415 LVEQESKTNTSPFF-HRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIA 473
N +PFF RF E L +++++F+ ++ PR+D++R+ E R+ +N+IA
Sbjct: 580 FGIVNGAYN-APFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIA 638
Query: 474 CEGIERVERHELLGKWRSRFMMAGFTPYRLSP-LVTNAVRDVLKDYDSNYRVEENDGALY 532
CEG ERVER E +W R M +G P ++ ++ V Y ++ +++++ L
Sbjct: 639 CEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLL 698
Query: 533 LGWRNRAMATSSAWK 547
GW+ R + S WK
Sbjct: 699 QGWKGRTVMALSVWK 713
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 129/376 (34%), Positives = 199/376 (52%)
Query: 175 LDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGS 234
L L +L+ CA+AVS ++ A L+ + Q+ + G +R+ AY E + ARL S
Sbjct: 288 LHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCL 347
Query: 235 KIYKALKCE---QPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQ 291
IY AL Q S +++S V I P KF++ +AN I EA E E +HIID
Sbjct: 348 GIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLD 407
Query: 292 IAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351
I QG QW L H LA RPGG P VR+TG+ S L GKRLS+FA +PF
Sbjct: 408 IMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEA------LQATGKRLSDFADKLGLPF 461
Query: 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPK 411
EF A ++ + L V+ EAV V++ L H + ++ H L L++ L+PK
Sbjct: 462 EFCPLAEKVGNLDTERLNVRKREAVAVHW---LQHSLYDVTGSDAHT---LWLLQRLAPK 515
Query: 412 VVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNM 471
VVT+VEQ+ ++ F RF+E + YY+A+F+S+ + + ++R EQ ++++I N+
Sbjct: 516 VVTVVEQDL-SHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNV 574
Query: 472 IACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN-YRVEENDGA 530
+A G R + WR + GF L+ +L + S+ Y + +++G
Sbjct: 575 LAVGGPSRSGEVKF-ESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGT 633
Query: 531 LYLGWRNRAMATSSAW 546
L LGW++ ++ T+SAW
Sbjct: 634 LKLGWKDLSLLTASAW 649
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 117/382 (30%), Positives = 198/382 (51%)
Query: 175 LDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFS-G 233
+D + +L CAQ+VS GD TA L+R + + S G+ +RL + L ARLE S G
Sbjct: 313 VDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTG 372
Query: 234 SKI---YKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDF 290
+ I Y ++ ++ +++++ SV P+ Y +N +I +A ++ ++HI+DF
Sbjct: 373 TMIQSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDF 432
Query: 291 QIAQGTQW-MFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNV 349
I G QW MF+ H PG L RITGI+ Q + G+RL+E+ V
Sbjct: 433 GILYGFQWPMFIQHLSKSNPGLRKL-RITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGV 491
Query: 350 PFEFQDTAMTACE-VERQHLRVQPGEAVVVNFPFVLHHMPDESVSTEN-HRDRLLRLVKS 407
PFE+ A E ++ + +++P E + VN ++ D E+ RD L+L++
Sbjct: 492 PFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRD 551
Query: 408 LSPKVVTLVEQESKTNTSPFFH-RFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVAR 466
++P V N +PFF RF E L +Y+A+F+ T +++ +RI E R
Sbjct: 552 MNPNVFLSSTVNGSFN-APFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGR 610
Query: 467 DIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKD--YDSNYRV 524
+++N+IACEG++RVER E +W+ R + AGF + + R+ +K Y ++ +
Sbjct: 611 EVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVL 670
Query: 525 EENDGALYLGWRNRAMATSSAW 546
+E+ GW+ R + +SS W
Sbjct: 671 DEDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 157/502 (31%), Positives = 231/502 (46%)
Query: 59 FYTLDSSTATTG--FSHDSPSAVSISSNRSTFSPQGSQSYQSDPHH---SPD--NAYGSP 111
F D T G F D IS S ++ +P + PD + Y S
Sbjct: 97 FRLSDFGGGTGGGEFESDEWMETLISGGDSVADGPDCDTWHDNPDYVIYGPDPFDTYPSR 156
Query: 112 MSGSSIVDEGNELRNKLRELEISLLGPESDIIDSCSCCFKSGTHQDTSAASWNWDQLMEM 171
+S + N + + L L P S + +S T +D + D ++
Sbjct: 157 LSVQP--SDLNRVIDTSSPLPPPTLWPPSSPLSIPPLTHESPTKEDPETND-SEDDDFDL 213
Query: 172 IPRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEF 231
P L LK + CA+ +SD D + A+ + + + VS G+P ER+ Y E L RL
Sbjct: 214 EPPL-LKAIYD-CAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSP 270
Query: 232 SGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQ 291
+ + + + ++SY + L CPY KFA+++AN I EA E + IHI+DF
Sbjct: 271 NSPATSSSSSSTEDL---ILSYKT-LNDACPYSKFAHLTANQAILEATEKSNKIHIVDFG 326
Query: 292 IAQGTQWMFLLHALAKRPGGSPL-VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350
I QG QW LL ALA R G P +R++GI + L G RL +FA ++
Sbjct: 327 IVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLN 386
Query: 351 FEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSP 410
F+F + RV P E + VNF L+ + DE T D LRL KSL+P
Sbjct: 387 FDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE---TPTIVDTALRLAKSLNP 443
Query: 411 KVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVN 470
+VVTL E E N F +R L +Y+A+FES++ RD ++R+ E+ R I
Sbjct: 444 RVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISG 503
Query: 471 MIACE--GIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYD-SN-YR-VE 525
+I E GI R ER E +WR AGF +LS + + +L +Y+ SN Y VE
Sbjct: 504 LIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVE 562
Query: 526 ENDGALYLGWRNRAMATSSAWK 547
G + L W + + T S+W+
Sbjct: 563 SKPGFISLAWNDLPLLTLSSWR 584
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 275 (101.9 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 69/214 (32%), Positives = 108/214 (50%)
Query: 175 LDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGS 234
L L +L+ CA V+ G + A + L + S G+ ++R+ AY E L R+ S
Sbjct: 52 LYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWP 111
Query: 235 KIYKALKCEQPVS---SELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQ 291
+YKAL Q + SE + + F++ P K +Y+ N I EA+E E ++H+ID
Sbjct: 112 GLYKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLD 171
Query: 292 IAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351
++ QW+ LL A RP G P +RITG+ H + L+ + RL E A ++PF
Sbjct: 172 ASEPAQWLALLQAFNSRPEGPPHLRITGV------HHQKEVLEQMAHRLIEEAEKLDIPF 225
Query: 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLH 385
+F + + LRV+ GEA+ V+ LH
Sbjct: 226 QFNPVVSRLDCLNVEQLRVKTGEALAVSSVLQLH 259
Score = 262 (97.3 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
Identities = 57/151 (37%), Positives = 83/151 (54%)
Query: 399 DRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRIS 458
D L + LSPKV+ + EQ+S N S R LE+L Y A+F+ ++ PR + RI
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 459 AEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKD- 517
E+ +I N+I+CEG ER ERHE L KW R +AGF LS R +L+
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449
Query: 518 -YDSNYRVEENDGALYLGWRNRAMATSSAWK 547
+D YR++E G + W++R + + SAW+
Sbjct: 450 GFDG-YRIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 127/384 (33%), Positives = 189/384 (49%)
Query: 173 PRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFS 232
P DL Q + + + L+R+ E VS SG+PI+R+G Y E L + S
Sbjct: 169 PDFDLNQPIFKAIHDYARKPETKPDTLIRIKES-VSESGDPIQRVGYYFAEALSHKETES 227
Query: 233 GSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQI 292
S + ++SY + L CPY KFA+++AN I EA + IHI+DF I
Sbjct: 228 PSS-----SSSSSLEDFILSYKT-LNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGI 281
Query: 293 AQGTQWMFLLHALAKRPGGSPL-VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPF 351
QG QW LL ALA R G P +RI+GI + G L G RL +FAA ++ F
Sbjct: 282 FQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNF 341
Query: 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPK 411
EF + RV P E +VVNF L+ + DE+ +T LRL +SL+P+
Sbjct: 342 EFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVG---TALRLARSLNPR 398
Query: 412 VVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNM 471
+VTL E E N F +R +L +Y+A+FES++ RD K+R+ E+ R I+++
Sbjct: 399 IVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDL 458
Query: 472 IACEGIERVE--RHELLGK---WRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSN--YR- 523
+ + R L+ + WR AGF P + S + + +L +Y+ + Y
Sbjct: 459 VRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSL 518
Query: 524 VEENDGALYLGWRNRAMATSSAWK 547
VE G + L W N + T S+W+
Sbjct: 519 VESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 117/381 (30%), Positives = 194/381 (50%)
Query: 175 LDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGS 234
+ L +L+ CA+ V+ + A+ L+ + ++ S G ER+ AY + L+ R+ S
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 235 KIYKALKCEQPV----SSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDF 290
+ E+P+ S ++ S + + P KF++ +AN I +A++ E +HIID
Sbjct: 98 SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 291 QIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVP 350
+ QG QW L H LA RP +RITG S A G+RL++FA+S N+P
Sbjct: 158 DVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDLLAS------TGRRLADFASSLNLP 211
Query: 351 FEFQDT-AMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLS 409
FEF + ++ L + GEAVVV++ + H + D T N+ + L +++ L
Sbjct: 212 FEFHPIEGIIGNLIDPSQLATRQGEAVVVHW--MQHRLYDV---TGNNLETL-EILRRLK 265
Query: 410 PKVVTLVEQE-SKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDI 468
P ++T+VEQE S + F RF+E L YY+A+F+++ + +R + EQ + +I
Sbjct: 266 PNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEI 325
Query: 469 VNMIACEGIERVERHELLGKWRSRFMMAGFTPYRL--SPLVTNAVRDVLKDYDSNYRVEE 526
N++A G R KW+ GF P L +P + + ++ VEE
Sbjct: 326 RNIVAHGGGRRKRM-----KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEE 380
Query: 527 NDGALYLGWRNRAMATSSAWK 547
N G L LGW++ ++ T+SAWK
Sbjct: 381 N-GTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 377 (137.8 bits), Expect = 5.6e-39, Sum P(2) = 5.6e-39
Identities = 95/310 (30%), Positives = 162/310 (52%)
Query: 253 YMSVLFQICPYWKFAYMSANVVIGEAVE-NEH-IIHIIDFQIAQGTQWMFLLHALAKR-- 308
Y L Q+ P+ +F +++AN I +A E N++ +HI+D I+QG QW L+ ALA+R
Sbjct: 145 YYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSS 204
Query: 309 -PGGSP-LVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEF-------QDTAMT 359
P P +RITG + GL+ G RL+ FA S + F+F +D A
Sbjct: 205 NPSSPPPSLRITGCGRDVT------GLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGL 258
Query: 360 ACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQE 419
++ L GE + VN LH + ++ H L +KSL+ ++VT+ E+E
Sbjct: 259 LLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGH---FLSAIKSLNSRIVTMAERE 315
Query: 420 SKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIER 479
+ F +RF E +D+Y A+F+S++ T P + ++R++ EQ ++I++++A E ER
Sbjct: 316 ANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETER 375
Query: 480 VERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLK-DYDSN-YRVEENDGALYLGWRN 537
+RH W GF + + + +L+ Y S Y ++ + +L+LGW+N
Sbjct: 376 KQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQN 435
Query: 538 RAMATSSAWK 547
R + + S+WK
Sbjct: 436 RPLFSVSSWK 445
Score = 56 (24.8 bits), Expect = 5.6e-39, Sum P(2) = 5.6e-39
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARL 229
L+++L A VS + + A L+ +L S G+ ERL + L R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 149/545 (27%), Positives = 239/545 (43%)
Query: 43 VSSQGTNMSFQTYKEQFYTLDSSTATTG-----FSHDSPSAVSISSNRSTFSPQ----GS 93
VS Q S Q +ST TTG + ++ P + + F + S
Sbjct: 8 VSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECFNFFMDEEDLSSS 67
Query: 94 QSYQSDPHHSPDNAYGSPMSGSSIVDEGNELRNKLRELEISLLGPESDIIDSCSCCFKSG 153
S+ + +H+ N Y SP + + +L P S SG
Sbjct: 68 SSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSS----------SG 117
Query: 154 THQDTSAASWNWDQLMEMIPRLDLK-------QVLIFCAQAVSDGDISTAAGLMRVLEQM 206
H D SA S + + P D VL+ A+A SD D + A ++ L ++
Sbjct: 118 HHNDPSAFS-----IPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNEL 172
Query: 207 VSVSGEPIERLGAYMLEGLRARLEFSGSKIYK----ALKCEQPVSSELMSYMSVLFQ-IC 261
S G+ ++L +Y L+ L R+ SG + Y+ A E+ S E + FQ +
Sbjct: 173 SSPYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVS 232
Query: 262 PYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGI- 320
P+ F +++AN I EAV+ E IHI+D TQW LL ALA R +P +R+T +
Sbjct: 233 PWATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVV 292
Query: 321 ------DDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTA--CEVERQHLRVQP 372
+D ++H + +G R+ +FA VPF+F E + L V+P
Sbjct: 293 VANKFVNDQTASHRM---MKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKP 349
Query: 373 GEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKT---NTSPFFH 429
E + +N +H + S + RD ++ + L P++VT+VE+E+ F
Sbjct: 350 DEVLAINCVGAMHGI----ASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDD 405
Query: 430 RFL----ETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHEL 485
FL E L ++ FES + + PR +R+ E+ R IV+++ACE + ER E
Sbjct: 406 EFLRGFGECLRWFRVCFESWEESFPRTSNERLMLER-AAGRAIVDLVACEPSDSTERRET 464
Query: 486 LGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNY--RVEENDGA-LYLGWRNRAMAT 542
KW R +GF S V + VR +L+ Y V+ D A ++L WR++ +
Sbjct: 465 ARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVW 524
Query: 543 SSAWK 547
+SAW+
Sbjct: 525 ASAWR 529
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 387 (141.3 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 120/414 (28%), Positives = 186/414 (44%)
Query: 151 KSGTHQDTSAASWNWDQLMEMIPRLDLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVS 210
+ T + T+ N + ++ +L +L C A+ +I+ + + S
Sbjct: 248 RGATEERTTGNINNNNNRNDLQRDFELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPR 307
Query: 211 GE-PIERLGAYMLEGLRARLEFSGSKIYKAL---KCEQPVSSELMSYMSVLFQICPYWKF 266
G P+ RL AY +E L R+ I+ + ++ V E + + L Q+ P KF
Sbjct: 308 GRTPMTRLIAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKF 367
Query: 267 AYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQST 326
+ +AN ++ A E + +HIIDF I QG QW +LA R VRITGI +S+
Sbjct: 368 IHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLE 427
Query: 327 HARGGGLDIVGKRLSEFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHH 386
L+ G RL FA + N+ FEF +V L V+ GE+V VN +H
Sbjct: 428 ------LNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHK 481
Query: 387 MPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESID 446
+ RD L L++S +P + L EQE++ N+ R +L YY+AMF++I
Sbjct: 482 TLYDGTGAAI-RD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIH 539
Query: 447 VTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPL 506
D R+ E+ R+I N++ACEG R ERH WR GF +S
Sbjct: 540 TNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSER 599
Query: 507 VTNAVRDVLKDYDSN----YRVEEND----------GALYLGWRNRAMATSSAW 546
+ +L+ Y S+ + VE +D G + L W + + T SAW
Sbjct: 600 EVLQSKMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
Score = 40 (19.1 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 76 PSAVSISSNRSTFSPQGSQSYQSDPHHSPDNAYGS--PMSGSSIVDE-------GNELRN 126
P+AV +S S+ S S+S +S H P+ GS P S +E N RN
Sbjct: 209 PAAVKEASGGSSTSAS-SES-RSLSHRVPEPTNGSRNPYSHRGATEERTTGNINNNNNRN 266
Query: 127 KL-RELE-ISLLGPESDIIDS 145
L R+ E ++LL D I S
Sbjct: 267 DLQRDFELVNLLTGCLDAIRS 287
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 336 (123.3 bits), Expect = 5.0e-30, P = 5.0e-30
Identities = 100/388 (25%), Positives = 188/388 (48%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKI 236
++Q+L+ CA A+ D + ++ VL + G+ +RL + L L +R +
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTL 86
Query: 237 YKALKCEQPVSSELMSY----MSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQI 292
+ P + EL + ++ + P+ +F +++AN I AVE +HI+D +
Sbjct: 87 SSTISF-LPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSL 145
Query: 293 AQGTQWMFLLHALAKRPGGSP-LVRITGIDDSQSTHAR---GGGLDIVGKRLSEFAASCN 348
Q L+ A+A R P L+++T + S S H + +G +L FA + N
Sbjct: 146 THCMQIPTLIDAMASRLNKPPPLLKLTVV--SSSDHFPPFINISYEELGSKLVNFATTRN 203
Query: 349 VPFEFQDTAMTACEVER---QHLRVQPG---EAVVVNFPFVLHHMPDESV--STENHRDR 400
+ EF T + Q LR+ P EA+VVN +L ++P+E + S+ + R
Sbjct: 204 ITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTV 263
Query: 401 LLRLVKSLSPKVVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAE 460
L+ ++SL+P++VTL+E++ + +R +Y+ F++ D T + ++ AE
Sbjct: 264 FLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTD-TFMSEQRRWYEAE 322
Query: 461 QHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS 520
++ I N++A EG ERVER E +W R A F R+ V+ +L+++
Sbjct: 323 ---ISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAV 379
Query: 521 NY--RVEENDGALYLGWRNRAMATSSAW 546
+ + E++D +L L W+ ++ ++ W
Sbjct: 380 GWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 345 (126.5 bits), Expect = 7.2e-30, P = 7.2e-30
Identities = 109/387 (28%), Positives = 176/387 (45%)
Query: 173 PRLDLKQVLIFCAQAVSDGDISTAAG----LMRV----LEQMVSVSGEP-IERLGAYMLE 223
P+ D + L V+ D ST A L RV L+ +VS +ERL A+
Sbjct: 94 PKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTN 153
Query: 224 GLRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEH 283
GL LE + + + ++++S +L + PY F Y++A I EAV+ E
Sbjct: 154 GLSKLLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYER 213
Query: 284 IIHIIDFQIAQGTQWMFLLHALAKRPGGSPL--VRITGIDDSQSTHARGGGLDIVGKRLS 341
IHI+D+ I +G QW L+ AL R G +RIT + + + + G+RL+
Sbjct: 214 RIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLT 273
Query: 342 EFAASCNVPFEFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRL 401
FA S PF +Q + L++ GEAVV+N + H+P S T +
Sbjct: 274 AFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVIN---CMLHLPRFSHQTPSSVISF 330
Query: 402 LRLVKSLSPKVVTLVEQE-SKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAE 460
L K+L+PK+VTLV +E F +RF++ L ++A+F+S++ + R E
Sbjct: 331 LSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVE 390
Query: 461 QHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS 520
+ + + N + E E W GF P +S + +L ++
Sbjct: 391 RVFIGPWVANWLTRITANDAEV-ESFASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFND 449
Query: 521 NYRVEE-NDGALYLGWRNRAMATSSAW 546
+RVEE L LGW++R + ++S W
Sbjct: 450 GFRVEELGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 281 (104.0 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 97/348 (27%), Positives = 150/348 (43%)
Query: 213 PIERLGAYMLEGLRARLEFSGSKIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSAN 272
P R +Y+ E L + L+ S S +L Q + + +Y + + P+ +F +AN
Sbjct: 291 PFHRAASYITEALHSLLQDS-SLSPPSLSPPQNLIFRIAAYRA-FSETSPFLQFVNFTAN 348
Query: 273 VVIGEAVENEHIIHIIDFQIAQGTQWMFLLHALA---KRPGGSPLVRITGIDDSQSTHAR 329
I E+ E IHI+DF I G QW L+ LA R +P ++IT S ST +
Sbjct: 349 QTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFA-SPSTVSD 407
Query: 330 GGGLDIVGKRLSEFAASCNVPFEFQ----DTAMTACEVERQHLRVQPGEAVVVNFPFVLH 385
L + L FA V FE + + + R EA+ VN P
Sbjct: 408 EFELRFTEENLRSFAGETGVSFEIELLNMEILLNPTYWPLSLFRSSEKEAIAVNLPI--- 464
Query: 386 HMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQE-SKTNTSPFFHRFLETLDYYTAMFES 444
S + +LR +K +SP VV ++ + N +PF + + L YYT++ ES
Sbjct: 465 -----SSMVSGYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLES 519
Query: 445 IDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLS 504
+D + + S E+ CV I ++ R E WRS F GFTP LS
Sbjct: 520 LDSGNLNNAEAATSIERFCVQPSIQKLLT----NRYRWMERSPPWRSLFGQCGFTPVTLS 575
Query: 505 PLV-TNAV----RDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 547
T A R+ ++ + R + + +L L W+ + + T SAWK
Sbjct: 576 QTAETQAEYLLQRNPMRGFHLEKR-QSSSPSLVLCWQRKELVTVSAWK 622
Score = 41 (19.5 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 62 LDSSTATTGFSHDSPSAVSISSNRSTFS 89
+ SST T SH PS ++ +TFS
Sbjct: 68 VSSSTTTLSSSHGGPSGGGAAA--ATFS 93
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 271 (100.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 94/375 (25%), Positives = 169/375 (45%)
Query: 177 LKQVLIFCAQAVSDGDISTAAGLM-RVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSK 235
+ + L+ A+ + + D A G++ R+ +Q+ S G+P+ER Y E L L
Sbjct: 205 ITEQLVKAAEVI-ESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLH----N 259
Query: 236 IYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQG 295
+ + L + ++ +Y S +I P +FA ++N + E+ H +HIIDF I G
Sbjct: 260 VSQTLN-PYSLIFKIAAYKS-FSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYG 317
Query: 296 TQWMFLLHALAKRPGGSPL-VRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQ 354
QW L+ L R +PL ++IT + S + H + L L FA+ N+ + Q
Sbjct: 318 GQWASLMQELVLRDNAAPLSLKIT-VFASPANHDQLE-LGFTQDNLKHFASEINISLDIQ 375
Query: 355 DTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT 414
++ EAV VN S ++ +H +LR VK LSP ++
Sbjct: 376 VLSLDLLG-SISWPNSSEKEAVAVNI----------SAASFSHLPLVLRFVKHLSPTIIV 424
Query: 415 LVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPR-DDKQRISAEQHCVARDIVNMIA 473
++ + PF + +L +TA+FES+D D Q+I E+ + +I ++
Sbjct: 425 CSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKI--ERFLIQPEIEKLVL 482
Query: 474 CEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYD-SNYRVEENDGALY 532
+ +ER + W++ F+ GF+P S + +++ + VE+ +L
Sbjct: 483 -DRSRPIERPMMT--WQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLL 539
Query: 533 LGWRNRAMATSSAWK 547
L W+ + SAW+
Sbjct: 540 LCWQRTELVGVSAWR 554
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 265 (98.3 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 99/379 (26%), Positives = 171/379 (45%)
Query: 184 CAQAVSDGDISTAAGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSG--SKIYKALK 241
CA A++ + S + VL ++ S SG+ RL A+ L L+ L S S +
Sbjct: 152 CALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVSSSFWPVFT 211
Query: 242 CEQPVSSELMSYMSVL---FQICPYWKFAYMSANV----VIGEAVENEHIIHIIDFQIAQ 294
S+E+ + L +++ P++ AN ++ + +++ +HIID ++
Sbjct: 212 F---ASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHIIDIGVSH 268
Query: 295 GTQWMFLLHALAKR-PGGSPLVRITGIDD--SQSTHARGGGLDIVGKRLSEFAASCNVPF 351
G QW LL AL+ R G P VRIT I D + + G G +L FA S +
Sbjct: 269 GMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFARSLKI-- 326
Query: 352 EFQDTAMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPK 411
Q + + ++ + P E ++V F LHH+ S++ E R L+ V+SL PK
Sbjct: 327 NLQISVLDKLQL----IDTSPHENLIVCAQFRLHHLK-HSINDE--RGETLKAVRSLRPK 379
Query: 412 VVTLVEQESKTNTSPFFHR-FLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVN 470
V L E + ++S F F + L+Y +++ +D T K+ S E+ + +
Sbjct: 380 GVVLCENNGECSSSADFAAGFSKKLEY---VWKFLDSTSS-GFKEENSEERKLMEGEATK 435
Query: 471 MIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGA 530
++ G + +E KW R AGF + + +L+ YD+N+ + DG
Sbjct: 436 VLMNAG----DMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLRKYDNNWEIRMEDGD 491
Query: 531 LYLG--WRNRAMATSSAWK 547
+ G W+ A++ S WK
Sbjct: 492 TFAGLMWKGEAVSFCSLWK 510
Score = 41 (19.5 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 155 HQDTSAASWNWDQLME 170
H+ + +W WDQ +
Sbjct: 39 HEFDGSQTWEWDQTQD 54
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 263 (97.6 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 95/377 (25%), Positives = 167/377 (44%)
Query: 189 SDGDISTAA-GLMRVLEQMVSVSGE---PIERLGAYMLEGLRARLEFSGSKIYKALKCEQ 244
++GD + A G++ L ++ S P +R +++ E L + + S L +
Sbjct: 285 NNGDHTVLAQGILARLNHHLNTSSNHKSPFQRAASHIAEALLSLIHNESSP---PLITPE 341
Query: 245 PVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHI--IHIIDFQIAQGTQWMFLL 302
+ + +Y S + P+ +F +AN I E+ IHIIDF + G QW L+
Sbjct: 342 NLILRIAAYRS-FSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLM 400
Query: 303 HALAKRPGG-----SPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTA 357
LA GG + +++T ST + L + L FA +PFE + +
Sbjct: 401 QELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLS 460
Query: 358 MTACEVERQ---HLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVT 414
+ LR EA+ VN P SV++ + +LR +K LSP +V
Sbjct: 461 VELLLNPAYWPLSLRSSEKEAIAVNLPV-------NSVAS-GYLPLILRFLKQLSPNIVV 512
Query: 415 LVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNMIAC 474
++ N +PF + + +L Y+T++ ES+D + +DD S E+ V I ++
Sbjct: 513 CSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDANQNQDDS---SIERFWVQPSIEKLL-- 567
Query: 475 EGIERVERHELLGK---WRSRFMMAGFTPYRLSPLVTNAVRDVL-KDYDSNYRVEENDGA 530
++RH + + WR F GF+P LS + +L ++ + VE+ +
Sbjct: 568 -----MKRHRWIERSPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSS 622
Query: 531 LYLGWRNRAMATSSAWK 547
L + W+ + + T SAWK
Sbjct: 623 LVMCWQRKELVTVSAWK 639
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 253 (94.1 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 97/383 (25%), Positives = 165/383 (43%)
Query: 176 DLKQVLIFCAQAVSDGDISTA-AGLMRVLEQMVSVSGEPIERLGAYMLEGLRARLEFSGS 234
D + LI V ++ A L R+ +++ S +G P++R Y E L + L S
Sbjct: 121 DFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNR 180
Query: 235 KIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEH---IIHIIDFQ 291
+ + V + + + I P F++ +AN I +++ ++ +H++DF+
Sbjct: 181 NPIRLSSWSEIV--QRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFE 238
Query: 292 IAQGTQWMFLLHALAKRPGGSPLVRITGIDDSQ-STHARGGGLDIVGKRLSEFAASCNVP 350
I G Q+ L+ + ++ +R+T + + + R +V + L++FAA +
Sbjct: 239 IGFGGQYASLMREITEKSVSGGFLRVTAVVAEECAVETR-----LVKENLTQFAAEMKIR 293
Query: 351 FEFQDTAMTACEV-ERQHLRVQPGEAVVVNF-PFVLHHMPDESVSTENHRDRLLRLVKSL 408
F+ + M E+ + +R GE VV P + + + N LR V
Sbjct: 294 FQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNN-----LRRV--- 345
Query: 409 SPKVVTLVEQESKTNT--SPFFHR-FLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVA 465
SPKVV V+ E T S F R F+ L++YT + ES+D P D + E V
Sbjct: 346 SPKVVVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAF-VL 404
Query: 466 RDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVL-KDYDSNYRV 524
R ++ +R RH WR F AG P +LS +L K + V
Sbjct: 405 RPKISAAVETAADR--RHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHV 462
Query: 525 EENDGALYLGWRNRAMATSSAWK 547
+ G L L W RA+ +SAW+
Sbjct: 463 AKRQGELVLCWHGRALVATSAWR 485
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 235 (87.8 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 91/385 (23%), Positives = 160/385 (41%)
Query: 176 DLKQVLIFCAQAVSDGDISTAAGLMRVLEQMVSVS-GEPIERLGAYMLEGLRARLEFSGS 234
D + LI + ++ A ++ L Q + S G P++R Y E L + L +G+
Sbjct: 98 DYIEDLIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLL--TGT 155
Query: 235 KIYKALKCEQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEH---IIHIIDFQ 291
+ V + + I P F++ +AN I +++ ++ +H++DF+
Sbjct: 156 NRNQLFSWSDIVQK--IRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFE 213
Query: 292 IAQGTQWMFLLHALAKRPGGSPLVRITGI-DDSQSTHARGGGLDIVGKRLSEFAASCNVP 350
I G Q+ L+ +A++ +R+T + + + R +V + L++FAA +
Sbjct: 214 IGFGGQYASLMREIAEKSANGGFLRVTAVVAEDCAVETR-----LVKENLTQFAAEMKIR 268
Query: 351 FEFQDTAMTACEV-ERQHLRVQPGEAVVVNF-PFVLHHMPDESVSTENHRDRLLRLVKSL 408
F+ + M E+ + +R GE VV P + + + + L R+
Sbjct: 269 FQIEFVLMKTFEILSFKAIRFVDGERTVVLISPAIFRRV----IGIAEFVNNLGRV---- 320
Query: 409 SPKVVTLVEQESKTNT--SPFFHR-FLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVA 465
SP VV V+ E T T S F R F+ ++YT + ES+D P D + E +
Sbjct: 321 SPNVVVFVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLR 380
Query: 466 RDIVNMIACEGIERVERHELLGK--WRSRFMMAGFTPYRLSPLVTNAVRDVL-KDYDSNY 522
I +E G+ WR AG P +LS +L K +
Sbjct: 381 PKI-----SAAVETAANRRSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGF 435
Query: 523 RVEENDGALYLGWRNRAMATSSAWK 547
V + G L L W RA+ +SAW+
Sbjct: 436 HVAKRQGELVLCWHGRALVATSAWR 460
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 234 (87.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 90/316 (28%), Positives = 138/316 (43%)
Query: 128 LRELEISLLGPESDIIDSCSCCFKSGTHQDTSAAS--WNWDQLMEMIPRLDLKQVLIFCA 185
LR L S SD ++ C +G +AA+ DQ + +L+ CA
Sbjct: 2 LRSLHSS---SSSDTDNNSGGCKNNGGGGGEAAAAVEGGGDQRAVAAAAPSTRDLLLACA 58
Query: 186 QAVSDGDISTAAGLMR-VLEQMVSVSGEPIERLGAYMLEGLRARLEFSGSKIYKALK--C 242
+ GD+ A VL S G+ +RL + L R++ + +
Sbjct: 59 DLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGHGHVVVGGGA 118
Query: 243 EQPVSSELMSYMSVLFQICPYWKFAYMSANVVIGEAVENEHIIHIIDFQIAQGTQWMFLL 302
+P SS +Y++ QI P+ +FA+++AN I EAV+ +HI+D G QW LL
Sbjct: 119 ARPASSG--AYLA-FNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLL 175
Query: 303 HALAKR--PG-GSPLVRITGIDDSQSTHARGGGLDIVGKRLSEFAASCNVPFEFQDTAMT 359
A+A+R P G P VR+TG + T R G RL FA S ++PF F ++
Sbjct: 176 QAIAERADPALGPPEVRVTGAGADRDTLLR------TGNRLRAFARSIHLPFHFTPLLLS 229
Query: 360 ACEVERQHLR-VQPGEAVVVNFPFV---LHHMPDESVSTEN----HR----DRL---LRL 404
H+ G A + L PDE+++ H D L L+
Sbjct: 230 CATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDELAAFLKW 289
Query: 405 VKSLSPKVVTLVEQES 420
VK++SP VVT+ E+E+
Sbjct: 290 VKAMSPAVVTIAEREA 305
Score = 193 (73.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 71/259 (27%), Positives = 113/259 (43%)
Query: 311 GSPLVRITGIDDSQSTHARGGG-LDIVGKRL------SEFAASC--NVPFEFQDT----- 356
G P VR+TG + T R G L + + + SC P T
Sbjct: 187 GPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAA 246
Query: 357 AMTACEVERQHLRVQPGEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLV 416
A + L P E + VN LH++ + + L+ VK++SP VVT+
Sbjct: 247 AAASTAAAATGLEFHPDETLAVNCVMFLHNL-----AGHDELAAFLKWVKAMSPAVVTIA 301
Query: 417 EQESKTNTSPFFH------RFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVN 470
E+E+ H R +D+Y+A+FE+++ T P ++R++ EQ + R+I
Sbjct: 302 EREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEA 361
Query: 471 MIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLK-DYDSN-YRVEEND 528
+ G R R + +W AGF LS + R +L+ Y S Y V+E
Sbjct: 362 AVGPSG-GRWWRG--IERWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEAR 418
Query: 529 GALYLGWRNRAMATSSAWK 547
GA +LGW+ R + + SAW+
Sbjct: 419 GACFLGWQTRPLLSVSAWQ 437
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 202 (76.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 477 IERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWR 536
+ERVERHELLGKW+ RF MAGF Y LS V + ++ +++ Y +Y + E DGA+ LGW+
Sbjct: 1 MERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYSEHYTLVEKDGAMLLGWK 60
Query: 537 NRAMATSSAW 546
R + ++SAW
Sbjct: 61 KRNLISASAW 70
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 197 (74.4 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 58/193 (30%), Positives = 101/193 (52%)
Query: 301 LLHALAKRPGGSPLVRITGIDDSQSTHAR---GGGLDIVGKRLSEFAASCNVPFEFQDTA 357
+ + L K+P PL+++T I H G + +G +L FA + NV EF+ +
Sbjct: 10 MANKLHKKP--PPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIIS 67
Query: 358 MTACEVER---QHLRVQP---GEAVVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPK 411
+ + + LR+ P EA+VVN +LH++PDE + T N R L+ ++ L+P
Sbjct: 68 SSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDE-ILTSNLRSVFLKELRDLNPT 126
Query: 412 VVTLVEQESKTNTSPFFHRFLETLDYYTAMFESIDVTRPRDDKQRISAEQHCVARDIVNM 471
+VTL++++S ++ F R +Y +++ ++ R +QR E ++ I N+
Sbjct: 127 IVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEAD-ISWKIDNV 185
Query: 472 IACEGIERVERHE 484
+A EG ERVER E
Sbjct: 186 VAKEGAERVERLE 198
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 547 547 0.00096 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 625 (66 KB)
Total size of DFA: 331 KB (2168 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.96u 0.13s 49.09t Elapsed: 00:00:03
Total cpu time: 48.98u 0.13s 49.11t Elapsed: 00:00:03
Start: Sat May 11 15:20:19 2013 End: Sat May 11 15:20:22 2013