Query 008993
Match_columns 547
No_of_seqs 116 out of 1556
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 19:06:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008993.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008993hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1574 Predicted metal-depend 100.0 1.7E-66 3.6E-71 532.6 49.7 495 43-547 3-533 (535)
2 cd01300 YtcJ_like YtcJ_like me 100.0 1E-54 2.2E-59 457.6 47.7 443 66-518 1-479 (479)
3 PF07969 Amidohydro_3: Amidohy 100.0 2.2E-37 4.8E-42 320.1 13.1 357 100-518 1-404 (404)
4 PRK06687 chlorohydrolase; Vali 100.0 1.5E-34 3.2E-39 299.1 33.3 367 47-547 2-410 (419)
5 PRK15493 5-methylthioadenosine 100.0 1.5E-34 3.2E-39 299.1 32.6 366 46-546 2-409 (435)
6 PRK09045 N-ethylammeline chlor 100.0 6.4E-34 1.4E-38 296.1 35.3 367 44-547 6-415 (443)
7 PRK07228 N-ethylammeline chlor 100.0 6.3E-34 1.4E-38 296.9 34.6 366 45-547 1-414 (445)
8 PRK08204 hypothetical protein; 100.0 1.1E-33 2.3E-38 295.8 33.1 371 44-547 1-417 (449)
9 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 4.5E-33 9.8E-38 288.8 34.1 365 47-547 1-406 (411)
10 PRK06038 N-ethylammeline chlor 100.0 7.8E-33 1.7E-37 286.4 34.6 360 45-546 2-400 (430)
11 PRK09356 imidazolonepropionase 100.0 3.3E-33 7.1E-38 288.6 30.4 376 44-547 2-406 (406)
12 PRK08203 hydroxydechloroatrazi 100.0 8.6E-33 1.9E-37 288.5 33.8 370 47-547 4-424 (451)
13 PRK12393 amidohydrolase; Provi 100.0 1.5E-32 3.2E-37 286.1 33.8 374 44-547 1-429 (457)
14 PRK06380 metal-dependent hydro 100.0 1.9E-32 4.1E-37 283.5 34.4 356 46-546 2-399 (418)
15 PRK09228 guanine deaminase; Pr 100.0 2.1E-32 4.5E-37 282.7 32.9 178 350-547 228-431 (433)
16 PRK07203 putative chlorohydrol 100.0 5.3E-32 1.1E-36 281.6 35.9 372 47-546 2-414 (442)
17 PRK07213 chlorohydrolase; Prov 100.0 4.4E-32 9.5E-37 275.7 30.1 354 47-544 2-375 (375)
18 TIGR03314 Se_ssnA putative sel 100.0 2E-31 4.2E-36 276.4 35.1 177 350-546 220-413 (441)
19 cd01303 GDEase Guanine deamina 100.0 5E-32 1.1E-36 280.1 30.3 179 350-542 225-429 (429)
20 PRK06151 N-ethylammeline chlor 100.0 6.9E-32 1.5E-36 283.3 31.8 374 46-547 2-438 (488)
21 PRK08393 N-ethylammeline chlor 100.0 5E-31 1.1E-35 272.7 35.1 178 350-546 205-399 (424)
22 COG1228 HutI Imidazolonepropio 100.0 1.1E-31 2.4E-36 270.3 28.9 359 45-547 10-402 (406)
23 cd01293 Bact_CD Bacterial cyto 100.0 9.2E-32 2E-36 277.8 29.2 156 374-545 230-398 (398)
24 TIGR02967 guan_deamin guanine 100.0 5.2E-31 1.1E-35 271.4 31.2 173 350-542 203-401 (401)
25 PRK09229 N-formimino-L-glutama 100.0 1.5E-30 3.3E-35 271.4 29.1 182 350-547 231-432 (456)
26 PRK07572 cytosine deaminase; V 100.0 1.2E-30 2.5E-35 269.8 26.4 373 45-547 2-402 (426)
27 PRK08418 chlorohydrolase; Prov 100.0 2E-29 4.4E-34 258.2 34.8 146 378-545 253-407 (408)
28 cd01313 Met_dep_hydrolase_E Me 100.0 6.6E-30 1.4E-34 263.3 27.8 178 350-543 222-418 (418)
29 PRK14085 imidazolonepropionase 100.0 1.4E-29 2.9E-34 258.5 29.8 336 45-524 1-365 (382)
30 TIGR01224 hutI imidazoloneprop 100.0 4.3E-30 9.4E-35 262.8 25.8 269 238-544 86-377 (377)
31 PRK09230 cytosine deaminase; P 100.0 7.1E-30 1.5E-34 262.8 26.2 375 43-547 2-406 (426)
32 TIGR02022 hutF formiminoglutam 100.0 1.2E-29 2.6E-34 263.9 27.8 182 350-547 231-432 (455)
33 PRK05985 cytosine deaminase; P 100.0 4.8E-29 1E-33 255.6 28.8 362 44-547 1-389 (391)
34 PRK07583 cytosine deaminase-li 100.0 8E-29 1.7E-33 256.9 29.6 377 41-546 7-422 (438)
35 cd01296 Imidazolone-5PH Imidaz 100.0 9.1E-29 2E-33 252.5 26.2 264 238-542 83-371 (371)
36 PLN02942 dihydropyrimidinase 100.0 5.9E-28 1.3E-32 253.0 32.0 164 376-547 233-442 (486)
37 COG0402 SsnA Cytosine deaminas 100.0 8.6E-28 1.9E-32 248.1 31.8 179 350-546 214-408 (421)
38 cd01312 Met_dep_hydrolase_D Me 100.0 2.4E-27 5.3E-32 240.4 33.6 152 370-543 222-381 (381)
39 PRK13309 ureC urease subunit a 100.0 9.4E-28 2E-32 247.0 29.7 124 413-547 333-461 (572)
40 KOG3968 Atrazine chlorohydrola 100.0 3.2E-28 6.9E-33 233.2 21.2 181 350-547 236-438 (439)
41 TIGR02033 D-hydantoinase D-hyd 100.0 3.2E-27 6.9E-32 247.7 29.1 165 377-547 230-438 (454)
42 PRK09357 pyrC dihydroorotase; 100.0 4.8E-27 1E-31 243.6 29.6 164 378-547 224-422 (423)
43 cd01314 D-HYD D-hydantoinases 100.0 1.1E-27 2.3E-32 250.4 25.0 166 376-547 228-436 (447)
44 cd01297 D-aminoacylase D-amino 100.0 5.8E-27 1.3E-31 241.5 30.0 370 46-547 1-404 (415)
45 PRK07627 dihydroorotase; Provi 100.0 1.4E-27 3.1E-32 245.1 24.6 168 378-547 226-423 (425)
46 PRK15446 phosphonate metabolis 100.0 9E-27 1.9E-31 236.2 30.0 95 431-547 287-381 (383)
47 PRK13207 ureC urease subunit a 100.0 7.3E-27 1.6E-31 239.8 27.3 146 389-547 281-457 (568)
48 cd01299 Met_dep_hydrolase_A Me 100.0 7.9E-27 1.7E-31 235.6 25.6 154 350-529 176-341 (342)
49 TIGR02318 phosphono_phnM phosp 100.0 3.3E-26 7.2E-31 231.3 29.4 126 389-546 251-376 (376)
50 PRK08323 phenylhydantoinase; V 100.0 5.5E-27 1.2E-31 246.0 24.0 166 376-547 226-436 (459)
51 PRK13206 ureC urease subunit a 100.0 2.4E-26 5.1E-31 235.3 27.5 106 433-547 351-462 (573)
52 cd01309 Met_dep_hydrolase_C Me 100.0 1.3E-26 2.8E-31 233.9 24.3 163 350-546 195-359 (359)
53 PRK09236 dihydroorotase; Revie 100.0 1.1E-25 2.4E-30 233.9 31.0 137 402-547 256-427 (444)
54 PRK06189 allantoinase; Provisi 100.0 3.1E-26 6.7E-31 238.5 26.4 162 379-547 233-432 (451)
55 PRK07575 dihydroorotase; Provi 100.0 1E-25 2.2E-30 233.2 30.1 160 378-547 225-421 (438)
56 PRK12394 putative metallo-depe 99.9 1.7E-25 3.8E-30 227.9 30.2 142 380-547 210-375 (379)
57 cd01315 L-HYD_ALN L-Hydantoina 99.9 4.6E-25 1E-29 230.6 31.1 161 379-547 231-433 (447)
58 PLN02795 allantoinase 99.9 4.8E-25 1E-29 230.9 31.2 164 378-547 285-489 (505)
59 TIGR03178 allantoinase allanto 99.9 2.6E-25 5.7E-30 231.3 27.3 160 379-547 230-429 (443)
60 PRK09060 dihydroorotase; Valid 99.9 1.6E-24 3.5E-29 224.5 32.0 159 378-547 227-423 (444)
61 PRK06846 putative deaminase; V 99.9 8.3E-25 1.8E-29 225.3 28.8 168 350-546 222-404 (410)
62 PRK13985 ureB urease subunit b 99.9 9.5E-25 2.1E-29 221.5 28.2 120 415-547 331-457 (568)
63 PRK13404 dihydropyrimidinase; 99.9 4.9E-25 1.1E-29 230.0 24.5 395 45-547 4-445 (477)
64 PRK09059 dihydroorotase; Valid 99.9 3.5E-24 7.6E-29 220.4 30.4 163 378-547 231-428 (429)
65 PRK09061 D-glutamate deacylase 99.9 3.6E-24 7.7E-29 224.6 30.8 67 43-115 17-83 (509)
66 TIGR01792 urease_alph urease, 99.9 7.6E-25 1.6E-29 225.4 25.0 120 414-546 329-455 (567)
67 TIGR01975 isoAsp_dipep isoaspa 99.9 1.8E-24 3.9E-29 218.1 25.8 91 433-546 267-377 (389)
68 PRK02382 dihydroorotase; Provi 99.9 8.3E-24 1.8E-28 219.7 30.9 154 379-547 228-419 (443)
69 PRK09237 dihydroorotase; Provi 99.9 5.9E-24 1.3E-28 217.2 29.3 140 381-546 206-368 (380)
70 PRK13308 ureC urease subunit a 99.9 2.7E-24 5.9E-29 219.2 26.5 102 434-547 346-458 (569)
71 cd00375 Urease_alpha Urease al 99.9 7.3E-24 1.6E-28 216.0 29.5 117 415-547 331-457 (567)
72 PRK08044 allantoinase; Provisi 99.9 1E-23 2.3E-28 218.6 29.6 168 379-547 236-434 (449)
73 COG0044 PyrC Dihydroorotase an 99.9 9.5E-24 2.1E-28 213.9 28.0 354 46-547 2-421 (430)
74 PRK10657 isoaspartyl dipeptida 99.9 1.5E-23 3.4E-28 215.2 29.9 159 350-546 193-376 (388)
75 PLN02303 urease 99.9 7.9E-24 1.7E-28 222.5 26.5 122 414-547 599-726 (837)
76 COG1820 NagA N-acetylglucosami 99.9 7.4E-24 1.6E-28 204.9 22.8 366 47-547 2-380 (380)
77 TIGR01178 ade adenine deaminas 99.9 5.7E-24 1.2E-28 223.2 23.9 142 381-547 177-332 (552)
78 PRK07369 dihydroorotase; Provi 99.9 2.8E-23 6.2E-28 212.7 26.0 144 378-523 227-386 (418)
79 KOG2584 Dihydroorotase and rel 99.9 4.1E-25 8.9E-30 210.9 8.2 400 43-547 12-454 (522)
80 PRK08417 dihydroorotase; Provi 99.9 2.3E-22 4.9E-27 204.9 25.2 164 378-547 195-386 (386)
81 PRK04250 dihydroorotase; Provi 99.9 8E-22 1.7E-26 200.7 28.6 156 378-547 197-385 (398)
82 TIGR00857 pyrC_multi dihydroor 99.9 3.5E-22 7.7E-27 205.5 25.9 169 378-547 212-410 (411)
83 COG1001 AdeC Adenine deaminase 99.9 5.1E-22 1.1E-26 200.0 21.4 133 382-547 226-359 (584)
84 PRK01211 dihydroorotase; Provi 99.9 1.9E-21 4.1E-26 197.8 25.9 150 380-546 209-389 (409)
85 COG3454 Metal-dependent hydrol 99.9 1.1E-21 2.4E-26 181.6 21.3 134 390-546 233-377 (377)
86 cd01308 Isoaspartyl-dipeptidas 99.9 4.1E-21 8.9E-26 197.1 26.6 96 432-546 264-375 (387)
87 PRK10027 cryptic adenine deami 99.9 3.9E-21 8.4E-26 201.8 26.0 68 43-114 28-95 (588)
88 TIGR00221 nagA N-acetylglucosa 99.9 2.1E-21 4.6E-26 195.3 23.1 67 455-543 314-380 (380)
89 PRK11170 nagA N-acetylglucosam 99.9 4.9E-21 1.1E-25 193.2 23.6 71 455-547 311-381 (382)
90 PRK00369 pyrC dihydroorotase; 99.9 1.9E-20 4.2E-25 189.3 26.3 153 379-546 191-372 (392)
91 cd01304 FMDH_A Formylmethanofu 99.9 3.6E-20 7.8E-25 188.9 27.7 110 436-546 367-496 (541)
92 cd00854 NagA N-acetylglucosami 99.9 5.4E-21 1.2E-25 194.1 20.5 128 382-542 242-374 (374)
93 COG3964 Predicted amidohydrola 99.9 3.9E-21 8.4E-26 175.9 16.6 69 44-117 3-71 (386)
94 TIGR03121 one_C_dehyd_A formyl 99.9 8.8E-20 1.9E-24 187.0 27.9 68 479-547 427-499 (556)
95 TIGR03583 EF_0837 probable ami 99.8 6.2E-18 1.3E-22 171.9 28.9 64 480-544 291-363 (365)
96 cd01295 AdeC Adenine deaminase 99.8 1.2E-18 2.5E-23 180.0 22.2 153 350-547 137-291 (422)
97 cd01307 Met_dep_hydrolase_B Me 99.8 5.9E-18 1.3E-22 170.1 26.0 117 381-523 187-317 (338)
98 COG3653 N-acyl-D-aspartate/D-g 99.8 5E-18 1.1E-22 162.5 21.6 71 43-116 4-74 (579)
99 cd01318 DHOase_IIb Dihydroorot 99.8 4.1E-18 8.9E-23 171.6 22.0 143 378-524 171-328 (361)
100 cd01317 DHOase_IIa Dihydroorot 99.8 1.9E-17 4.1E-22 168.6 18.9 137 379-523 186-344 (374)
101 COG0804 UreC Urea amidohydrola 99.8 6.7E-17 1.5E-21 153.5 20.3 118 416-546 332-456 (568)
102 cd01306 PhnM PhnM is believed 99.8 1.1E-16 2.4E-21 156.8 22.4 121 389-542 205-325 (325)
103 PF01979 Amidohydro_1: Amidohy 99.7 5.2E-17 1.1E-21 163.5 17.7 121 379-520 205-333 (333)
104 cd01302 Cyclic_amidohydrolases 99.7 6.1E-16 1.3E-20 154.9 22.0 139 379-523 147-307 (337)
105 cd01305 archeal_chlorohydrolas 99.7 3.9E-16 8.5E-21 151.2 16.6 97 381-498 166-263 (263)
106 COG1229 FwdA Formylmethanofura 99.6 2.9E-13 6.2E-18 129.3 25.2 68 479-546 435-509 (575)
107 PRK06886 hypothetical protein; 99.6 1.4E-13 3E-18 135.4 21.2 243 237-502 59-328 (329)
108 PF13147 Amidohydro_4: Amidohy 99.6 8.7E-15 1.9E-19 144.6 9.0 77 429-517 224-304 (304)
109 cd01316 CAD_DHOase The eukaryo 99.5 1.1E-11 2.5E-16 123.6 23.6 152 378-547 148-333 (344)
110 KOG3892 N-acetyl-glucosamine-6 99.3 3.5E-11 7.6E-16 109.2 15.7 60 478-547 345-404 (407)
111 cd01292 metallo-dependent_hydr 99.3 2E-10 4.4E-15 111.8 17.5 224 239-498 27-275 (275)
112 PF13594 Amidohydro_5: Amidohy 99.2 2.1E-11 4.4E-16 91.3 3.6 44 67-113 1-44 (68)
113 cd01294 DHOase Dihydroorotase 99.1 9.8E-09 2.1E-13 103.1 19.7 123 379-512 163-308 (335)
114 cd01320 ADA Adenosine deaminas 99.0 2.8E-08 6.1E-13 99.5 19.4 230 240-502 66-314 (325)
115 TIGR01430 aden_deam adenosine 98.9 1.4E-07 3.1E-12 94.3 19.4 231 240-503 65-314 (324)
116 PRK09358 adenosine deaminase; 98.7 3.3E-07 7.1E-12 92.3 16.6 230 239-502 73-323 (340)
117 TIGR00856 pyrC_dimer dihydroor 98.3 8.3E-05 1.8E-09 74.5 20.6 126 379-520 166-311 (341)
118 PTZ00124 adenosine deaminase; 98.3 0.0001 2.3E-09 73.9 20.0 225 241-501 100-349 (362)
119 cd00443 ADA_AMPD Adenosine/AMP 98.3 6E-05 1.3E-09 74.5 17.6 226 240-502 39-294 (305)
120 PRK05451 dihydroorotase; Provi 98.1 6.9E-05 1.5E-09 75.4 14.0 126 378-511 168-313 (345)
121 PLN02599 dihydroorotase 98.0 0.0011 2.4E-08 66.7 20.3 123 378-508 186-329 (364)
122 cd01321 ADGF Adenosine deamina 97.9 0.0013 2.8E-08 65.9 19.3 229 241-502 64-330 (345)
123 TIGR00010 hydrolase, TatD fami 97.8 0.0022 4.8E-08 61.5 18.3 98 380-501 146-252 (252)
124 PRK10812 putative DNAse; Provi 97.7 0.0051 1.1E-07 59.3 19.8 123 350-503 127-258 (265)
125 cd01310 TatD_DNAse TatD like p 97.7 0.0031 6.6E-08 60.5 18.1 94 380-500 146-251 (251)
126 COG1816 Add Adenosine deaminas 97.7 0.0018 3.9E-08 63.8 15.9 229 240-502 78-326 (345)
127 PF00962 A_deaminase: Adenosin 97.5 0.0014 2.9E-08 65.9 13.1 227 241-502 72-321 (331)
128 PRK11449 putative deoxyribonuc 97.2 0.026 5.7E-07 54.2 17.8 117 350-501 130-258 (258)
129 cd00530 PTE Phosphotriesterase 97.2 0.074 1.6E-06 52.3 20.5 130 350-499 152-293 (293)
130 TIGR01431 adm_rel adenosine de 97.1 0.04 8.8E-07 57.6 19.0 233 241-503 191-457 (479)
131 PRK09875 putative hydrolase; P 97.1 0.1 2.2E-06 50.8 20.1 220 249-500 36-292 (292)
132 PRK10425 DNase TatD; Provision 97.0 0.074 1.6E-06 51.0 18.5 122 350-501 124-258 (258)
133 COG0084 TatD Mg-dependent DNas 96.8 0.051 1.1E-06 51.7 15.2 120 350-501 128-256 (256)
134 KOG1097 Adenine deaminase/aden 96.8 0.1 2.2E-06 52.0 17.0 229 242-502 116-372 (399)
135 PLN03055 AMP deaminase; Provis 95.5 0.073 1.6E-06 56.3 9.6 120 350-503 419-544 (602)
136 cd01319 AMPD AMP deaminase (AM 95.5 0.073 1.6E-06 55.4 9.3 120 350-503 329-454 (496)
137 TIGR01429 AMP_deaminase AMP de 95.3 0.1 2.3E-06 55.3 9.9 120 350-503 441-566 (611)
138 PF00449 Urease_alpha: Urease 95.2 0.033 7.1E-07 44.6 4.4 37 44-82 65-101 (121)
139 COG1099 Predicted metal-depend 95.2 2.5 5.4E-05 38.7 17.9 97 375-501 154-253 (254)
140 PLN02768 AMP deaminase 94.6 0.2 4.3E-06 54.4 9.9 120 350-503 652-777 (835)
141 PF02126 PTE: Phosphotriestera 94.6 2.6 5.7E-05 41.5 16.9 231 246-499 37-307 (308)
142 PRK06361 hypothetical protein; 93.8 0.32 7E-06 45.2 8.6 96 380-501 114-210 (212)
143 PTZ00310 AMP deaminase; Provis 93.7 0.34 7.4E-06 56.0 9.8 120 350-503 482-608 (1453)
144 PTZ00310 AMP deaminase; Provis 93.5 0.41 9E-06 55.3 10.1 120 350-503 1112-1237(1453)
145 PF12890 DHOase: Dihydro-orota 92.7 0.037 8.1E-07 45.8 0.4 20 98-117 1-20 (142)
146 PF01026 TatD_DNase: TatD rela 91.5 8.5 0.00018 36.9 15.1 117 350-500 127-255 (255)
147 COG0418 PyrC Dihydroorotase [N 90.3 18 0.00039 34.9 16.5 83 366-451 158-250 (344)
148 PRK00912 ribonuclease P protei 86.6 5.7 0.00012 37.6 9.8 114 380-512 104-228 (237)
149 PRK07328 histidinol-phosphatas 83.7 24 0.00052 34.0 12.9 63 380-451 155-231 (269)
150 KOG2902 Dihydroorotase [Nucleo 83.3 23 0.0005 32.9 11.4 47 364-412 155-202 (344)
151 PRK08392 hypothetical protein; 81.1 46 0.001 30.8 14.9 43 394-452 143-185 (215)
152 COG1735 Php Predicted metal-de 78.5 68 0.0015 31.2 15.5 232 249-502 50-315 (316)
153 PRK07945 hypothetical protein; 76.4 66 0.0014 32.2 13.5 49 391-453 248-296 (335)
154 PRK08609 hypothetical protein; 73.4 86 0.0019 34.0 14.3 85 350-452 434-529 (570)
155 COG1387 HIS2 Histidinol phosph 68.0 1.1E+02 0.0024 28.9 12.7 62 378-453 124-198 (237)
156 PRK07114 keto-hydroxyglutarate 62.9 1.3E+02 0.0029 28.0 12.6 50 380-448 70-119 (222)
157 PF07908 D-aminoacyl_C: D-amin 59.4 12 0.00026 25.3 2.9 16 532-547 17-32 (48)
158 TIGR01856 hisJ_fam histidinol 55.5 1.9E+02 0.0041 27.5 12.4 51 392-451 189-239 (253)
159 PRK06740 histidinol-phosphatas 52.7 2.5E+02 0.0054 28.0 13.8 50 394-451 245-294 (331)
160 COG0800 Eda 2-keto-3-deoxy-6-p 51.9 2E+02 0.0043 26.6 13.5 61 365-448 53-113 (211)
161 PRK08123 histidinol-phosphatas 46.4 2.8E+02 0.006 26.7 14.7 54 391-452 200-253 (270)
162 COG1603 RPP1 RNase P/RNase MRP 42.2 2.1E+02 0.0046 26.7 9.0 91 389-500 114-210 (229)
163 PRK06015 keto-hydroxyglutarate 40.7 2.9E+02 0.0063 25.3 10.7 62 364-448 43-104 (201)
164 COG3618 Predicted metal-depend 40.7 3.5E+02 0.0075 26.2 18.5 56 435-501 220-278 (279)
165 PF15581 Imm35: Immunity prote 39.8 91 0.002 23.9 5.1 49 480-546 44-92 (93)
166 PF04909 Amidohydro_2: Amidohy 38.9 2.6E+02 0.0057 26.3 10.0 112 367-501 155-273 (273)
167 PF10055 DUF2292: Uncharacteri 33.1 61 0.0013 20.8 2.8 16 66-81 19-34 (38)
168 COG4464 CapC Capsular polysacc 32.4 4.1E+02 0.009 24.6 12.9 62 380-452 131-197 (254)
169 PRK06552 keto-hydroxyglutarate 28.0 4.9E+02 0.011 24.1 13.5 66 364-449 52-117 (213)
170 PF01081 Aldolase: KDPG and KH 27.6 2.4E+02 0.0052 25.8 6.9 62 364-448 47-108 (196)
171 TIGR01182 eda Entner-Doudoroff 27.5 4.9E+02 0.011 23.9 12.7 62 364-448 47-108 (204)
172 PRK05718 keto-hydroxyglutarate 26.2 5.3E+02 0.011 23.9 11.9 62 364-448 54-115 (212)
173 PRK05588 histidinol-phosphatas 25.7 96 0.0021 29.5 4.3 52 391-452 169-221 (255)
174 cd01733 LSm10 The eukaryotic S 25.2 1.4E+02 0.003 22.6 4.2 35 43-77 41-75 (78)
175 COG0502 BioB Biotin synthase a 24.6 4.4E+02 0.0096 26.3 8.6 84 358-447 115-198 (335)
176 PRK06256 biotin synthase; Vali 20.6 8.4E+02 0.018 24.1 11.5 59 385-445 146-204 (336)
177 PRK07329 hypothetical protein; 20.1 1.6E+02 0.0035 27.9 4.6 51 392-452 169-220 (246)
No 1
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=1.7e-66 Score=532.58 Aligned_cols=495 Identities=38% Similarity=0.592 Sum_probs=438.9
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
.+.++++.|++|++++...+....|.|+||||++||+......+..+.+++||++|++|+|||||+|.|+..++......
T Consensus 3 ~~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~ 82 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLEL 82 (535)
T ss_pred cccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhcc
Confidence 45689999999999998777888999999999999999888777667889999999999999999999999999988777
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEE--EeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWIL--GGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g 200 (547)
.+.++++.+++.+.+++..+..+..+|+. |++|+...|....|++..+|+++++.|+++.+.++|.+++|+++|+.+|
T Consensus 83 ~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~G 162 (535)
T COG1574 83 NLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAG 162 (535)
T ss_pred cccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcC
Confidence 88899999999999999999888776655 5667788888889999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHH-HHHHHHhCCccEEEeCccCCCCcccccc
Q 008993 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLR-ASNLALSRGVTTVVDFGRYYPGESVQLS 279 (547)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 279 (547)
++..++.+.||.+.+..+|+++|.+.|.+...+....+..+++...+.... +++.+.+.|+|+++++..+ ..
T Consensus 163 i~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~~-------~~ 235 (535)
T COG1574 163 ITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAGY-------QG 235 (535)
T ss_pred CCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEccccc-------cc
Confidence 999999999998889999999999999988888888888776666666555 8999999999999999851 23
Q ss_pred hhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc----------
Q 008993 280 WEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE---------- 349 (547)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------- 349 (547)
....+..++.+...+.+++++..........+ ...-.........++..+++|.|.||++++.++.+.+
T Consensus 236 ~~~~~~~~r~~~~~~~l~~rv~~~l~~~~~~~-~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G 314 (535)
T COG1574 236 YYADYEAYRALAAGGELPVRVALLLFTEDLKE-ERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSG 314 (535)
T ss_pred chhHHHHHHHHHhcCcceEEEEeeccccchhh-HHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCC
Confidence 35667899999999999999998776655443 1111112233456788899999999999999886544
Q ss_pred ----------------------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEec
Q 008993 350 ----------------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ 407 (547)
Q Consensus 350 ----------------------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~ 407 (547)
+.+|+.|+.+++.+++++|+....++..+.+.+++|..++++++++++++.|+.+++|
T Consensus 315 ~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~R~~~Lgv~~svQ 394 (535)
T COG1574 315 ELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIERFAKLGVIASVQ 394 (535)
T ss_pred CcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHHHHHhcCceEeec
Confidence 9999999999999999999999999888889999999999999999999999999999
Q ss_pred CccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHH
Q 008993 408 PQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 487 (547)
Q Consensus 408 p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 487 (547)
|.+..++.+++..++|.+|. ...+|++.|.++|++++.|||+|+++.|||.+++.++.|....+.... .+..||.+||
T Consensus 395 P~f~~~~~~~~~~rlG~~r~-~~~~p~~~ll~~G~~la~gSD~Pv~~~dP~~~i~~AVtr~~~~g~~~~-~~~~L~~~eA 472 (535)
T COG1574 395 PNFLFSDGEWYVDRLGEERA-SRSYPFRSLLKAGVPLAGGSDAPVEPYDPWLGIYAAVTRKTPGGRVLG-PEERLTREEA 472 (535)
T ss_pred cccccccchHHHHhhhhhhh-hccCcHHHHHHCCCeEeccCCCCCCCCChHHHHHHHHcCCCCCCCCCc-cccccCHHHH
Confidence 99998887899999999999 999999999999999999999999999999999999998765442211 2227999999
Q ss_pred HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993 488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+++|.++|++.|.++++|+|++||.|||+|+|.|+|. +...+...+|..|+++|++||.
T Consensus 473 L~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~i~~~~v~~T~~~Gk~VY~ 533 (535)
T COG1574 473 LRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDSIKDTKVVLTIVAGKVVYR 533 (535)
T ss_pred HHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHHhccceEEEEEEcCeEeec
Confidence 99999999999999999999999999999999999999 8888889999999999999995
No 2
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=100.00 E-value=1e-54 Score=457.58 Aligned_cols=443 Identities=44% Similarity=0.683 Sum_probs=377.2
Q ss_pred EEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccCCCCCHHHHHHHHHHHHHcCC
Q 008993 66 SMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSK 145 (547)
Q Consensus 66 ~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~~~~ 145 (547)
.|.|+||||++||+..+...+..+.++++|+.|++|+|||||+|+|+..++......++.++.+.+++.+++++..+..+
T Consensus 1 a~~v~~g~i~~vg~~~~~~~~~~~~~~~~d~~~~~~~PGfiD~H~H~~~~~~~~~~~~l~~~~s~~e~~~~l~~~~~~~~ 80 (479)
T cd01300 1 AVAVRDGRIVAVGSDAEAKALKGPATEVIDLKGKTVLPGFIDSHSHLLLGGLSLLWLDLSGVTSKEEALARIREDAAAAP 80 (479)
T ss_pred CeEEECCEEEEECCHHHHHhhcCCCcEEEECCCCEEccCcccccccchhhcccceeecCCCCCCHHHHHHHHHHHHHhCC
Confidence 37899999999998776654434677999999999999999999999988887777888999999999999999988888
Q ss_pred CCCeEEEeCCCCCCcC-CCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCCCCCCCeEeeCCCCCcCEE
Q 008993 146 KGSWILGGGWNNDLWG-GDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGL 224 (547)
Q Consensus 146 ~~~~~~g~~~~~~~~~-~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~~~~~~~~~~~g~ 224 (547)
++.|+.|++|++..|. ++.|++..||++++++|+++.+.++|..++|+++|+.+|++..++.+.+|.+.++.+|.++|.
T Consensus 81 ~~~wi~~~g~~~~~~~~~~~p~~~~LD~~~~d~Pv~l~~~~~H~~~~Ns~al~~~gi~~~~~~~~~g~~~~~~~g~~tG~ 160 (479)
T cd01300 81 PGEWILGFGWDESLLGEGRYPTRAELDAVSPDRPVLLLRRDGHSAWVNSAALRLAGITRDTPDPPGGEIVRDADGEPTGV 160 (479)
T ss_pred CCCeEEECCcCHHHcCCCCCCCHHHHhcccCCCcEEEEccCchHHHHHHHHHHHcCCCCCCCCCCCCEEeeCCCCCccEE
Confidence 9999999999999995 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred EhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEcc
Q 008993 225 LIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF 304 (547)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (547)
+.|.++......++..+.++..+.++.+.+.+.++|+|++.++.... ....+.++++.+++.+++++....
T Consensus 161 l~e~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GiT~v~d~~~~~---------~~~~~~~~~l~~~~~l~~rv~~~~ 231 (479)
T cd01300 161 LVEAAAALVLEAVPPPTPEERRAALRAAARELASLGVTTVHDAGGGA---------ADDIEAYRRLAAAGELTLRVRVAL 231 (479)
T ss_pred EeHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCCh---------hhHHHHHHHHHHCCCCeEEEEEEe
Confidence 99998877777777888899999999999999999999999976321 123578889998888888876643
Q ss_pred Cccchh--hHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc--------------------------------e
Q 008993 305 PLETWS--SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE--------------------------------V 350 (547)
Q Consensus 305 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------------------------------v 350 (547)
...... ...+..........+++..+++|++.||+++.+++.+.+ +
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vKl~~DG~~~~~ta~l~~pY~~~~~~~g~~~~~~e~l~~~~~~a~~~g~~v 311 (479)
T cd01300 232 YVSPLAEDLLEELGARKNGAGDDRLRLGGVKLFADGSLGSRTAALSEPYLDSPGTGGLLLISPEELEELVRAADEAGLQV 311 (479)
T ss_pred ccccchhhhhhHHhhhccCCCCCcEEEeeEEEEEcCCCCcccccccCCcCCCCCCCCCccCCHHHHHHHHHHHHHCCCCE
Confidence 222211 111111111223457899999999999999977765433 9
Q ss_pred eEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHh-hChhhhhh
Q 008993 351 AIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKK-LGVDRAER 429 (547)
Q Consensus 351 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~-~g~~~~~~ 429 (547)
++|+.++.+++.+++++++.....+..+.+..++|+.++++++++++++.|+.+++||.+........... ++.++. +
T Consensus 312 ~~Ha~gd~~i~~~l~~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~gv~~~~~P~~~~~~~~~~~~~~lg~~~~-~ 390 (479)
T cd01300 312 AIHAIGDRAVDTVLDALEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKLGVIASVQPNHLYSDGDAAEDRRLGEERA-K 390 (479)
T ss_pred EEEEecHHHHHHHHHHHHHHHHhcCCCCCCceeeecccCCHHHHHHHHHcCCceEeCcccccCchHHHHHhcccHHHH-h
Confidence 99999999999999999998888777778899999999999999999999999999999887665554444 787787 8
Q ss_pred hchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccccc
Q 008993 430 ESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 509 (547)
Q Consensus 430 ~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~ 509 (547)
..+|++.+.++|+++++|||++..+.+|+..++.++.+........+..+++++++++|+++|.|||+++|+++++|+|+
T Consensus 391 ~~~p~~~~~~~Gv~v~lGSD~~~~~~~p~~~~~~av~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe 470 (479)
T cd01300 391 RSYPFRSLLDAGVPVALGSDAPVAPPDPLLGIWAAVTRKTPGGGVLGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLE 470 (479)
T ss_pred cCchHHHHHHCCCeeeccCCCCCCCCCHHHHHHHHheeeCCCCCCCCCccccCCHHHHHHHHHHHHHHHhcccccccccc
Confidence 88899999999999999999998888999999999887553322222356789999999999999999999999899999
Q ss_pred CCCcccEEE
Q 008993 510 PGKIADFVI 518 (547)
Q Consensus 510 ~Gk~ADlvv 518 (547)
+||.|||+|
T Consensus 471 ~Gk~ADlvv 479 (479)
T cd01300 471 PGKLADFVV 479 (479)
T ss_pred CCcccceeC
Confidence 999999986
No 3
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=100.00 E-value=2.2e-37 Score=320.07 Aligned_cols=357 Identities=41% Similarity=0.604 Sum_probs=282.5
Q ss_pred eeeccccccccccccccccc-cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcC-CCCC-Chhhh--hhhC
Q 008993 100 VVVPGFIDSHVHFIPGGLQM-ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWG-GDLP-MASWI--DDIT 174 (547)
Q Consensus 100 ~v~PGlID~H~H~~~~~~~~-~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-~~~~l--d~~~ 174 (547)
+|+|||||+|+|+...+... ..+++.+..|..++...++.+..+ .|++|..+.|. ++.| ++..| |.++
T Consensus 1 ~v~PGfiD~H~H~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~-------~~~g~~~~~~~~~~~~~~~~~L~~D~~~ 73 (404)
T PF07969_consen 1 TVMPGFIDSHTHLDSAGLWDPRSVDLSGQGSIDEILCGIRAAAAK-------VGFGWDESLFPEGRLPPTREELPWDEAS 73 (404)
T ss_dssp EEEE-EEEEEEEHTTHHHHHTCSECHCTTTCCCCHHCCHHT-SSS-------EEEEEHHHHHCCSSTCTCHHHHHCTTSS
T ss_pred CCccChhHHhhChHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh-------ccCCCCHHHhhcccccCCHHHhhhhhHh
Confidence 58999999999998776654 556777777888888888877654 88888888884 6677 99999 9999
Q ss_pred CCCeEEEEecCCchhhhcHHHHHHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCC--CCHHHHHHHHHHH
Q 008993 175 PHNPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPE--VSVDERREALLRA 252 (547)
Q Consensus 175 ~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 252 (547)
++.|+++.+.++|..++|+++|+. .+|.++|.+.+.++......++. .+.++.++.++.+
T Consensus 74 ~~~Pv~~~~~~~h~~~~Ns~al~~------------------~~g~~~G~l~e~a~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (404)
T PF07969_consen 74 PDRPVFIRRFDGHSAWLNSAALEL------------------ADGEPTGILREAAMVLGWRAIPATAAELEEMREALREA 135 (404)
T ss_dssp SSSHEEEEECCCSEEEECHHHHHH------------------TEETTCCEEEHHHHHHCCHHHHHTHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCcChHHHHhHHHhhc------------------cccCCceeeehhhhhhHHhhCccccCCHHHHHHHHHHH
Confidence 999999999999999999999986 34667899999988666555555 5677778888888
Q ss_pred HHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceE
Q 008993 253 SNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGV 332 (547)
Q Consensus 253 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (547)
.+.+.+.|+|++.++.. ......+..+.++++.++++++++++.++ ..+++
T Consensus 136 ~~~~~a~GiTt~~d~~~------~~~~~~~~~~~~~~l~~~~~l~~rv~~~~-----------------------~~~~v 186 (404)
T PF07969_consen 136 AMAAGAYGITTVLDYGG------GFASDPEDLEALRELAAEGGLPLRVHLYP-----------------------RIGGV 186 (404)
T ss_dssp HHHHCHTCEEEETTCEC------CCGEHHHHHHHHHHHHHCTC--SEEEEEE-----------------------EEEEE
T ss_pred HHHhcCCCeEEecCCcc------ccCCCHHHHHHHHHHhhhcCCCeeeeeec-----------------------ccCce
Confidence 99999999999999871 11244678899999999999999988654 34455
Q ss_pred EEEEcCCcCcchhhhhc-------------------------------------eeEEecccHHHHHHHHHHHHHHHhcC
Q 008993 333 KAFADGSLGSNSALFHE-------------------------------------VAIHAIGDRANDLVLDMYKSVVVTTG 375 (547)
Q Consensus 333 ~~~~d~~~~~~~~~~~~-------------------------------------v~~H~~~~~~~~~~~~~~~~~~~~~~ 375 (547)
|.+.||+....++.+.. +.+|+.++.+++.+++++++.....
T Consensus 187 k~~~dg~~~~~~a~~~~~~~~~~~g~~~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~~l~a~~~~~~~~- 265 (404)
T PF07969_consen 187 KIFADGSPGGRTALLEEPYYADEPGAPVHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDEALDAIEAARARG- 265 (404)
T ss_dssp EEESSSSTTHHHHHHHHHHHHHHHTSEEEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHHHHHHHHHHTCCH-
T ss_pred eeccccccccchhhhccccccCcccccccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHhHHHHHHhhcccc-
Confidence 55555554432222111 9999999999999999998874432
Q ss_pred CCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCCh-hHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC
Q 008993 376 KRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDA-DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD 454 (547)
Q Consensus 376 ~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~-~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~ 454 (547)
.++|+...++++++++++.++.+.++|.+...+. ......++.++. +...+++.+.++|+++++|||+|...
T Consensus 266 ------~i~h~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Gv~v~~gsD~p~~~ 338 (404)
T PF07969_consen 266 ------RIEHAELIDPDDIERMAELGVTASVQPHFLFSWGGEWYEERLGPERA-RRIYPIRSLLDAGVRVALGSDAPVSP 338 (404)
T ss_dssp ------EEEEHCBCCHHHHHHHHHHTTEEEECCTHHHHETEETHHHHHHHHCG-GGBTHHHHHHHCTTEEEE--TTTTSS
T ss_pred ------eeeccccCCHHHHHHHHHhCCccccChhHhhhccchhhhhhhhhHHH-HHHhHHHHHHhccCceecCcCCcccc
Confidence 8999999999999999999999999996655544 556777888888 88899999999999999999999988
Q ss_pred CChHHHHHHHHcccCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEE
Q 008993 455 INPLCAIRTAMKRIPPGWD--NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 518 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv 518 (547)
.+|+..++.++.+...... ..+..++.+|++|||+++|.|||+.+|+++++|+|+|||.|||||
T Consensus 339 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 339 PNPFRGIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp CCHHHHHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred cCcchhhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 9999999999987553210 112224789999999999999999999999889999999999997
No 4
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=1.5e-34 Score=299.07 Aligned_cols=367 Identities=23% Similarity=0.281 Sum_probs=231.7
Q ss_pred EEEEcCEEEeCCCC--CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 47 LVVTNGVIFTGDDS--LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 47 ~li~n~~v~~~~~~--~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
++|+|++|+++++. ..++++|+|+||||++||+...... +...++||++|++|+|||||+|+|+++...
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~--~~~~~viD~~g~~v~PGlIn~H~H~~~~~~------- 72 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFL--EQAEQIIDYQGAWIMPGLVNCHTHSAMTGL------- 72 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccc--cccCeEEeCCCCEEccceeeeccCCCcccc-------
Confidence 47999999998764 3367799999999999998654311 245689999999999999999999975532
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
.|.+. ..+...|++..
T Consensus 73 --------------------------rg~~~-------~~~~~~wl~~~------------------------------- 88 (419)
T PRK06687 73 --------------------------RGIRD-------DSNLHEWLNDY------------------------------- 88 (419)
T ss_pred --------------------------ccccC-------CCCHHHHHHhh-------------------------------
Confidence 00000 00111122110
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
++......+++......+.++.++.+.|+|++.++.... + .. ..
T Consensus 89 ----------------------------~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~-~----~~---~~ 132 (419)
T PRK06687 89 ----------------------------IWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPN-G----VD---IQ 132 (419)
T ss_pred ----------------------------hccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccc-c----cc---HH
Confidence 000001234455666677778888889999888864211 0 01 12
Q ss_pred HHHHHHhhCCCCeeEEEEcc-----Ccc----chhhHHHHHHhcCCCCCCcEEEceEEE-EEcCCcCcchhh-hhc----
Q 008993 285 DVYQWASYSEKMKIRVCLFF-----PLE----TWSSLADLINKTGHVLSDWVYLGGVKA-FADGSLGSNSAL-FHE---- 349 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~-~~~---- 349 (547)
..++.+.+.| +|..+.. ... ...+..++++......... ++. ++-......+.. +..
T Consensus 133 ~~~~a~~~~G---ir~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----i~~~~~~~~~~~~s~e~l~~~~~~ 204 (419)
T PRK06687 133 QIYQVVKTSK---MRCYFSPTLFSSETETTAETISRTRSIIDEILKYKNPN-----FKVMVAPHSPYSCSRDLLEASLEM 204 (419)
T ss_pred HHHHHHHHhC---CceEeccccccCCcccHHHHHHHHHHHHHHHhccCCCc-----eEEEEeCCCCCCCCHHHHHHHHHH
Confidence 2333333322 2322211 011 1222233332211110111 221 122222211111 111
Q ss_pred -------eeEEecccH-HHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH
Q 008993 350 -------VAIHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS 417 (547)
Q Consensus 350 -------v~~H~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~ 417 (547)
+++|..+.. ....+++.+. +.+...+.++++..++|+.++++++++++++.|+.+.+||.++.
T Consensus 205 A~~~g~~i~~H~~e~~~e~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~----- 279 (419)
T PRK06687 205 AKELNIPLHVHVAETKEESGIILKRYGKRPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNL----- 279 (419)
T ss_pred HHHcCCcEEEEeCCCHHHHHHHHHHHCcCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhh-----
Confidence 888987543 3444444332 23566788889999999999999999999999999999998543
Q ss_pred HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 418 ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 418 ~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
+++ .+.+|+++++++|+++++|||+..+ +.+++.++..+....... ......++++++++|+|.+|
T Consensus 280 ---~l~-----~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~aT~~g 347 (419)
T PRK06687 280 ---KLA-----SGIAPIIQLQKAGVAVGIATDSVASNNNLDMFEEGRTAALLQKMK----SGDASQFPIETALKVLTIEG 347 (419)
T ss_pred ---hhc-----cCCCcHHHHHHCCCeEEEeCCCCCCCCChhHHHHHHHHHHHhccc----cCCCccCCHHHHHHHHhHHH
Confidence 222 5567899999999999999998543 467888888765432210 01234689999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCC-CC--Ch----hhh----cCCeEEEEEECcEEeCC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSS-WE--DF----AAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~-~~--~~----~~~----~~~~v~~v~v~G~~v~~ 547 (547)
|+++|+++++|+|++||.|||+++|.+. +. +. ..+ ...+|..|||+|++|++
T Consensus 348 A~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~p~~~~~~~lv~~~~~~~v~~v~v~G~~v~~ 410 (419)
T PRK06687 348 AKALGMENQIGSLEVGKQADFLVIQPQGKIHLQPQENMLSHLVYAVKSSDVDDVYIAGEQVVK 410 (419)
T ss_pred HHHcCCCCCCcccCCCccCCEEEECCCCCCCcCCccCHHHHhheeCCCCCccEEEECCEEEEE
Confidence 9999999889999999999999999752 21 22 222 25689999999999863
No 5
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=1.5e-34 Score=299.10 Aligned_cols=366 Identities=19% Similarity=0.235 Sum_probs=229.7
Q ss_pred cEEEEcCEEEeCCCC--CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccc
Q 008993 46 DLVVTNGVIFTGDDS--LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (547)
Q Consensus 46 ~~li~n~~v~~~~~~--~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~ 123 (547)
+++|+|++|++++.. ..++++|+|+||||++||+...... ++++++||++|++|+|||||+|+|+++...
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~~--~~~~~viD~~g~~i~PGlVn~H~H~~~~~~------ 73 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFASD--FEVDEVIDMKGKWVLPGLVNTHTHVVMSLL------ 73 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCcccccc--CCCCeEEeCCCCEEccceeecccCccchhh------
Confidence 589999999987643 3467899999999999998532211 346789999999999999999999875421
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 008993 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (547)
Q Consensus 124 ~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~ 203 (547)
.|.+- ..+...|+...
T Consensus 74 ---------------------------rg~~~-------~~~l~~wl~~~------------------------------ 89 (435)
T PRK15493 74 ---------------------------RGIGD-------DMLLQPWLETR------------------------------ 89 (435)
T ss_pred ---------------------------hccCC-------CCCHHHHHHhc------------------------------
Confidence 11100 00111111110
Q ss_pred CCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHH
Q 008993 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (547)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 283 (547)
++......++++.+...+.++.++++.|+|++.|+..... . ..+
T Consensus 90 -----------------------------~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~-~----~~~-- 133 (435)
T PRK15493 90 -----------------------------IWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIG-V----DQD-- 133 (435)
T ss_pred -----------------------------hhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccc-c----CHH--
Confidence 0000123455666777777888888889988888642110 0 011
Q ss_pred HHHHHHHhhCCCCeeEEEEc---cC---ccc----hhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc---
Q 008993 284 ADVYQWASYSEKMKIRVCLF---FP---LET----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE--- 349 (547)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~---~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~--- 349 (547)
...+.+.+ - ++|.... +. .+. ..+...+++..... .+++.. .+.-+.....+. .+.+
T Consensus 134 -~~~~a~~~-~--GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~----~~~~~~~~t~s~e~l~~~~~ 204 (435)
T PRK15493 134 -AIMETVSR-S--GMRAAVSRTLFSFGTKEDEKKAIEEAEKYVKRYYNE-SGMLTT----MVAPHSPYTCSTELLEECAR 204 (435)
T ss_pred -HHHHHHHH-c--CCcEEEeeeecCCCCCccHHHHHHHHHHHHHHhcCC-CCCeEE----EEeCCCCCcCCHHHHHHHHH
Confidence 22222222 2 2333221 11 111 12222222221110 111111 011111211111 1111
Q ss_pred --------eeEEeccc-HHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChh
Q 008993 350 --------VAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDAD 416 (547)
Q Consensus 350 --------v~~H~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~ 416 (547)
+++|.... ...+.+.+.+ -+.+.+.|.++++..+.||.++++++++++++.|+.+++||.++.
T Consensus 205 ~A~~~g~~v~~H~~e~~~e~~~~~~~~g~~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~---- 280 (435)
T PRK15493 205 IAVENQTMVHIHLSETEREVRDIEAQYGKRPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNL---- 280 (435)
T ss_pred HHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHH----
Confidence 88888643 3333333322 134556688889999999999999999999999999999999653
Q ss_pred HHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 008993 417 SARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLS 494 (547)
Q Consensus 417 ~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n 494 (547)
.++ .+.+|+++|.++|+++++|||+..+ +.+++.+++.+....... ......++++++++++|.+
T Consensus 281 ----~l~-----~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~aT~~ 347 (435)
T PRK15493 281 ----KLG-----SGIANVKAMLEAGIKVGIATDSVASNNNLDMFEEMRIATLLQKGI----HQDATALPVETALTLATKG 347 (435)
T ss_pred ----HHh-----cCcccHHHHHHCCCeEEEccCccccCCCcCHHHHHHHHHHHHhhc----cCCCCcCCHHHHHHHHhHH
Confidence 222 5567999999999999999998654 468999998766542210 1124578999999999999
Q ss_pred HHHHcccCCCcccccCCCcccEEEEcCC-CCC--C----hhhhc----CCeEEEEEECcEEeC
Q 008993 495 AARACFLENDVGSLSPGKIADFVILSTS-SWE--D----FAAEV----SASIEATYVSGVQAY 546 (547)
Q Consensus 495 ~A~~lgl~~~~GsI~~Gk~ADlvv~d~d-~~~--~----~~~~~----~~~v~~v~v~G~~v~ 546 (547)
||+.+|+++ +|+|++||.|||+++|.+ ... + ...+. ..+|.+|||+|++|+
T Consensus 348 gA~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~p~~d~~~~lv~~~~~~~V~~v~V~G~~v~ 409 (435)
T PRK15493 348 AAEVIGMKQ-TGSLEVGKCADFITIDPSNKPHLQPADEVLSHLVYAASGKDISDVIINGKRVV 409 (435)
T ss_pred HHHHcCCCC-CCccCCCCcCCEEEEcCCCCCCcCCccChHHhEEEeCCCCCccEEEECCEEEE
Confidence 999999975 899999999999999963 211 2 22222 557999999999886
No 6
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.4e-34 Score=296.07 Aligned_cols=367 Identities=24% Similarity=0.273 Sum_probs=228.6
Q ss_pred cccEEEEcCEEEeCCC--CCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMAR 121 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~--~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~ 121 (547)
+.+++|+|+.|++++. ...++++|+|+||||++||+....... +++.++||++|++|+|||||+|+|+.....
T Consensus 6 ~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~-~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~---- 80 (443)
T PRK09045 6 PVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARAR-YAAAETVELPDHVLIPGLINAHTHAAMSLL---- 80 (443)
T ss_pred cccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCccccccc-CCcceEEeCCCCEEecCEeccccChhhHhh----
Confidence 3589999999999763 334677999999999999986543211 245789999999999999999999964421
Q ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCC
Q 008993 122 VKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (547)
Q Consensus 122 ~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~ 201 (547)
.|... ..+...++...
T Consensus 81 ---~g~~~---------------------------------~~~~~~w~~~~---------------------------- 96 (443)
T PRK09045 81 ---RGLAD---------------------------------DLPLMTWLQDH---------------------------- 96 (443)
T ss_pred ---hhccC---------------------------------CCCHHHHHHhh----------------------------
Confidence 00000 00000111100
Q ss_pred CCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchh
Q 008993 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (547)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 281 (547)
+.. ......+++..+......+.++.+.|+|++.++..+ .+
T Consensus 97 ----------------------------~~~--~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~~---------~~ 137 (443)
T PRK09045 97 ----------------------------IWP--AEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMYFF---------PE 137 (443)
T ss_pred ----------------------------hhh--hhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecccc---------HH
Confidence 000 000123456666667777788888888888876421 00
Q ss_pred HHHHHHHHHhhCCCCeeEEEEcc-----Ccc---chhhHH----HHHHhcCCCCCCcEEEceEEEEEcCCcCcch-hhhh
Q 008993 282 DFADVYQWASYSEKMKIRVCLFF-----PLE---TWSSLA----DLINKTGHVLSDWVYLGGVKAFADGSLGSNS-ALFH 348 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~ 348 (547)
...+...+. + +|..+.. +.. ...+.. +...... ..+++... +.-+.....+ ..+.
T Consensus 138 ---~~~~~~~~~-G--~R~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~i~~~----~~~~~~~~~~~~~l~ 205 (443)
T PRK09045 138 ---AAAEAAHQA-G--MRAQIGMPVLDFPTAWASDADEYLAKGLELHDQWR--HHPLISTA----FAPHAPYTVSDENLE 205 (443)
T ss_pred ---HHHHHHHHc-C--CeEEEecccccCCCccccCHHHHHHHHHHHHHHhc--CCCcEEEE----EeCCCCCCCCHHHHH
Confidence 112222322 2 2332211 111 111111 1111111 11222221 1111111111 1111
Q ss_pred c-----------eeEEec-ccHHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCcccc
Q 008993 349 E-----------VAIHAI-GDRANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLL 412 (547)
Q Consensus 349 ~-----------v~~H~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~ 412 (547)
+ +++|+. +.......++.+ -+.+.+.+..+++..++|+.++++++++++++.|+.+.+||.++.
T Consensus 206 ~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~ 285 (443)
T PRK09045 206 RIRTLAEQLDLPIHIHLHETAQEIADSLKQHGQRPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNL 285 (443)
T ss_pred HHHHHHHHcCCCEEEeecCcHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHh
Confidence 1 788874 223333333321 123456678888999999999999999999999999999997542
Q ss_pred CChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHH
Q 008993 413 DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIA 490 (547)
Q Consensus 413 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 490 (547)
.++ ....|++.+.++|+++++|||++.+ ..+++.+++.+...... ......+++++++|++
T Consensus 286 --------~~~-----~~~~~~~~l~~~Gv~v~lGtD~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~al~~ 348 (443)
T PRK09045 286 --------KLA-----SGFCPVAKLLQAGVNVALGTDGAASNNDLDLFGEMRTAALLAKA----VAGDATALPAHTALRM 348 (443)
T ss_pred --------hhc-----cCCCcHHHHHHCCCeEEEecCCCCCCCCccHHHHHHHHHHHHhh----ccCCCCcCCHHHHHHH
Confidence 111 4456899999999999999998764 36888888876432210 0112457899999999
Q ss_pred HHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--C----hhhh----cCCeEEEEEECcEEeCC
Q 008993 491 HTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 491 aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~----~~~~----~~~~v~~v~v~G~~v~~ 547 (547)
+|.|||+.+|+++++|+|++||.|||+++|.++++ + ..++ ...+|..||++|++||+
T Consensus 349 ~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~p~~~~~~~lv~~~~~~~v~~v~v~G~~v~~ 415 (443)
T PRK09045 349 ATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLETQPVYDPVSQLVYAAGREQVSHVWVAGKQLLD 415 (443)
T ss_pred HhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCcCCccChHhHhhEeCCCCCccEEEECCEEEEE
Confidence 99999999999988999999999999999998764 1 1222 25689999999999974
No 7
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.3e-34 Score=296.94 Aligned_cols=366 Identities=22% Similarity=0.294 Sum_probs=232.6
Q ss_pred ccEEEEcCEEEeCCCC-CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccc
Q 008993 45 ADLVVTNGVIFTGDDS-LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~-~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~ 123 (547)
++++|+|++|+++++. ...+++|+|+||+|.+|++.... +..+++||++|++|+|||||+|+|+.....
T Consensus 1 ~~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~----~~~~~vID~~G~~vlPGlId~H~H~~~~~~------ 70 (445)
T PRK07228 1 MTILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDL----EDYDDHIDATGKVVIPGLIQGHIHLCQTLF------ 70 (445)
T ss_pred CeEEEEccEEEecCCCcEecccEEEEECCEEEEecCCccc----CcCCeEEeCCCCEEecCEEecccCCccccc------
Confidence 3589999999998653 34778999999999999986432 236789999999999999999999964311
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 008993 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (547)
Q Consensus 124 ~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~ 203 (547)
.|..- ..+...+++.
T Consensus 71 ---------------------------~g~~~-------~~~~~~~~~~------------------------------- 85 (445)
T PRK07228 71 ---------------------------RGIAD-------DLELLDWLKD------------------------------- 85 (445)
T ss_pred ---------------------------eeccC-------CCCHHHHHHh-------------------------------
Confidence 00000 0000011100
Q ss_pred CCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHH
Q 008993 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (547)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 283 (547)
.++......++++.....+....++...|+|++.++.... ..
T Consensus 86 ----------------------------~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~----------~~ 127 (445)
T PRK07228 86 ----------------------------RIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVH----------HT 127 (445)
T ss_pred ----------------------------hhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEcccccc----------Ch
Confidence 0000113356677778888889999999999999986311 11
Q ss_pred HHHHHHHhhCCCCeeEEEEc-----c----Cc---cc----hhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-h
Q 008993 284 ADVYQWASYSEKMKIRVCLF-----F----PL---ET----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-L 346 (547)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~-----~----~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 346 (547)
...++.+.+.+ +|.... . +. +. ..+..++++.........+.. .+........+. .
T Consensus 128 ~~~~~a~~~~g---~r~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~----~~~~~~~~~~~~~~ 200 (445)
T PRK07228 128 DSAFEAAGESG---IRAVLGKVMMDYGDDVPEGLQEDTEASLAESVRLLEKWHGADNGRIRY----AFTPRFAVSCTEEL 200 (445)
T ss_pred HHHHHHHHHcC---CeEEEecceecCCcCCCccccccHHHHHHHHHHHHHHhcCCCCCceEE----EEeCCCCCCCCHHH
Confidence 23344444333 232221 0 11 01 122223332211100011111 111211111111 1
Q ss_pred hhc-----------eeEEecccHH-HHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCcc
Q 008993 347 FHE-----------VAIHAIGDRA-NDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 410 (547)
Q Consensus 347 ~~~-----------v~~H~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~ 410 (547)
+.. +++|+.+... ++.+..... ..+...+..+.+..++|+.++++++++++++.|+.+.+||.+
T Consensus 201 l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~ 280 (445)
T PRK07228 201 LRGVRDLADEYGVRIHTHASENRGEIETVEEETGMRNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSS 280 (445)
T ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHH
Confidence 111 8899865433 222211110 233445677889999999999999999999999999999985
Q ss_pred ccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHH
Q 008993 411 LLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 488 (547)
Q Consensus 411 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 488 (547)
+.. ++ ...+|++.++++|+++++|||++.. ..+++.++..+....... ......+++++++
T Consensus 281 ~~~--------~~-----~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~al 343 (445)
T PRK07228 281 NLK--------LA-----SGIAPVPDLLERGINVALGADGAPCNNTLDPFTEMRQAALIQKVD----RLGPTAMPARTVF 343 (445)
T ss_pred hhh--------cc-----cccCcHHHHHHCCCeEEEcCCCCccCCCccHHHHHHHHHHHhhhc----cCCCcccCHHHHH
Confidence 431 11 4557899999999999999998653 367898888765432210 0122468999999
Q ss_pred HHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-Ch-h------h----hcCCeEEEEEECcEEeCC
Q 008993 489 IAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF-A------A----EVSASIEATYVSGVQAYP 547 (547)
Q Consensus 489 ~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~-~------~----~~~~~v~~v~v~G~~v~~ 547 (547)
+++|.|||+.+|+++++|+|++||.|||+|+|.+++. .+ . . ....+|..||++|++||+
T Consensus 344 ~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 414 (445)
T PRK07228 344 EMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSHGVDVLSHLVYAAHGSDVETTMVDGKIVME 414 (445)
T ss_pred HHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCcccCHHHHhheeCCCCCeeEEEECCEEEEE
Confidence 9999999999999888999999999999999998654 11 1 1 225689999999999874
No 8
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=295.79 Aligned_cols=371 Identities=20% Similarity=0.235 Sum_probs=232.7
Q ss_pred cccEEEEcCEEEeCCC--CCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMAR 121 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~--~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~ 121 (547)
|.+++|+|++|++.++ ....+++|+|++|||++|++..+ ++..++||++|++|+|||||+|+|+......
T Consensus 1 ~~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~-----~~~~~viD~~g~~v~PGlId~H~H~~~~~~~--- 72 (449)
T PRK08204 1 MKRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIE-----APDAEVVDARGMIVMPGLVDTHRHTWQSVLR--- 72 (449)
T ss_pred CCcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCC-----CCCCeEEeCCCCEEecCEEeeeeccchhhhc---
Confidence 4578999999998654 34467799999999999998643 2356899999999999999999998543210
Q ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCC
Q 008993 122 VKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (547)
Q Consensus 122 ~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~ 201 (547)
|... ..+...++..
T Consensus 73 ----~~~~---------------------------------~~~~~~~~~~----------------------------- 86 (449)
T PRK08204 73 ----GIGA---------------------------------DWTLQTYFRE----------------------------- 86 (449)
T ss_pred ----cccC---------------------------------CCcHHHHHHh-----------------------------
Confidence 0000 0000000000
Q ss_pred CCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchh
Q 008993 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (547)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 281 (547)
......+..++++...........+.+.|+|++.++...... ..
T Consensus 87 ------------------------------~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~------~~ 130 (449)
T PRK08204 87 ------------------------------IHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNS------PE 130 (449)
T ss_pred ------------------------------hcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCC------hh
Confidence 000011334556666667777889999999999987643211 12
Q ss_pred HHHHHHHHHhhCCCCeeEEEEc--cCc-----------cchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhh
Q 008993 282 DFADVYQWASYSEKMKIRVCLF--FPL-----------ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFH 348 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 348 (547)
......+.+.+.| +|..+. ... +..++...+.++........+.. + ....+........+.
T Consensus 131 ~~~~~~~~~~~~G---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~e~l~ 204 (449)
T PRK08204 131 HADAAIRGLAEAG---IRAVFAHGSPGPSPYWPFDSVPHPREDIRRVKKRYFSSDDGLLTL-G--LAIRGPEFSSWEVAR 204 (449)
T ss_pred HHHHHHHHHHHcC---CeEEEEccccCCCCCCCcchhhhhHHHHHHHHHhhccCCCCceEE-E--EecCCcccCCHHHHH
Confidence 2234444444332 233221 110 11222222222211111111111 1 111111000001111
Q ss_pred c-----------eeEEecccHH--HHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCCh
Q 008993 349 E-----------VAIHAIGDRA--NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDA 415 (547)
Q Consensus 349 ~-----------v~~H~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~ 415 (547)
. +++|+.+... ....++.+ ...+..+++..++|+.++++++++++++.|+.+++||.++.
T Consensus 205 ~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~l----~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~--- 277 (449)
T PRK08204 205 ADFRLARELGLPISMHQGFGPWGATPRGVEQL----HDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEM--- 277 (449)
T ss_pred HHHHHHHHcCCcEEEEEcCCCcccCCCHHHHH----HHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHh---
Confidence 1 8888853311 11112222 23466778899999999999999999999999999997542
Q ss_pred hHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHHHHHHHHcccCCC--C-----CCCCCCCCCCCHHHH
Q 008993 416 DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPG--W-----DNAWIPSERISLTDA 487 (547)
Q Consensus 416 ~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~l~~~~a 487 (547)
.++ ...+|++.+.++|+++++|||++. .+.+++.+++.++...... . ...+..+.++++.++
T Consensus 278 -----~~g-----~~~~~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 347 (449)
T PRK08204 278 -----MMG-----HGYPVTGRLLAHGVRPSLGVDVVTSTGGDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQV 347 (449)
T ss_pred -----hhc-----CCCCcHHHHHhcCCceeeccccCCCCCcCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHH
Confidence 122 445689999999999999999864 4578999998877542210 0 001224578999999
Q ss_pred HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC------Chhhh----cCCeEEEEEECcEEeCC
Q 008993 488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE------DFAAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~------~~~~~----~~~~v~~v~v~G~~v~~ 547 (547)
|+++|.|+|+.+|+++++|+|++||.|||+++|.+++. +..++ ...+|..||++|++||.
T Consensus 348 l~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld~~~~~~~p~~dp~~~lv~~~~~~~v~~v~v~G~~v~~ 417 (449)
T PRK08204 348 LEWATIEGARALGLEDRIGSLTPGKQADLVLIDATDLNLAPVHDPVGAVVQSAHPGNVDSVMVAGRAVKR 417 (449)
T ss_pred HHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCccccCCcChhhhheeccCCCCceEEEECCEEEEE
Confidence 99999999999999988999999999999999998543 12222 25699999999999863
No 9
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=4.5e-33 Score=288.77 Aligned_cols=365 Identities=20% Similarity=0.271 Sum_probs=224.7
Q ss_pred EEEEcCEEEeCCCC-CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccC
Q 008993 47 LVVTNGVIFTGDDS-LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLR 125 (547)
Q Consensus 47 ~li~n~~v~~~~~~-~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~ 125 (547)
++|+|++|+++++. ...+++|+|+||||.+|++..+... ++..++||+.|++|+|||||+|+|+......... .
T Consensus 1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~--~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~---~ 75 (411)
T cd01298 1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPA--YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLA---D 75 (411)
T ss_pred CeEEeeEEEEeCCcceeecceEEEECCEEEEecCcccccc--CCcCeEEeCCCCEEccCccccccchhhHHhhccc---C
Confidence 47999999998543 3367799999999999998654211 2467899999999999999999998643110000 0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCC
Q 008993 126 GVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLS 205 (547)
Q Consensus 126 g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~ 205 (547)
+ .+.. .++...
T Consensus 76 ~-~~~~------------------------------------~~l~~~-------------------------------- 86 (411)
T cd01298 76 D-LPLM------------------------------------EWLKDL-------------------------------- 86 (411)
T ss_pred C-CCHH------------------------------------HHHHhh--------------------------------
Confidence 0 0000 001000
Q ss_pred CCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHH
Q 008993 206 EDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFAD 285 (547)
Q Consensus 206 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (547)
........+.+++......+...+...|+|++.++....+ + .
T Consensus 87 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--------~---~ 128 (411)
T cd01298 87 ---------------------------IWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYP--------D---A 128 (411)
T ss_pred ---------------------------hhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccch--------H---H
Confidence 0000012344566666777778888889988888754211 1 1
Q ss_pred HHHHHhhCCCCeeEEEEcc---Cc---cc----hhhHHHHHHhcCCCCCCcEEEceEEEEEc-CCcCcch-hhhhc----
Q 008993 286 VYQWASYSEKMKIRVCLFF---PL---ET----WSSLADLINKTGHVLSDWVYLGGVKAFAD-GSLGSNS-ALFHE---- 349 (547)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~---~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~-~~~~~---- 349 (547)
..+.... .++.+...... +. +. .++..+.++.......+ .++.+.. +.....+ ..+.+
T Consensus 129 ~~~~~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~k~~~~~~~~~~~~~~~l~~~~~~ 202 (411)
T cd01298 129 VAEAAEE-LGIRAVLGRGIMDLGTEDVEETEEALAEAERLIREWHGAADG-----RIRVALAPHAPYTCSDELLREVAEL 202 (411)
T ss_pred HHHHHHH-hCCeEEEEcceecCCCcccccHHHHHHHHHHHHHHhcCCCCC-----ceEEEEeCCCCccCCHHHHHHHHHH
Confidence 1222222 12222221111 11 11 12222322221111011 1222211 1111111 11111
Q ss_pred -------eeEEecccH-HHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH
Q 008993 350 -------VAIHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS 417 (547)
Q Consensus 350 -------v~~H~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~ 417 (547)
+.+|+.+.. ..+.+.+... +.....+..+.+..++|+.++++++++++++.|+.+.+||.++.
T Consensus 203 A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~----- 277 (411)
T cd01298 203 AREYGVPLHIHLAETEDEVEESLEKYGKRPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNM----- 277 (411)
T ss_pred HHHcCCcEEEEecCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhh-----
Confidence 889976443 3333332221 12234566677889999999999999999999999999998543
Q ss_pred HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 418 ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 418 ~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
.++ ...+|++.++++|+++++|||++.+ ..+++.+++.+....... ...+.+++++++|+++|.||
T Consensus 278 ---~~~-----~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~al~~~T~~~ 345 (411)
T cd01298 278 ---KLA-----SGIAPVPEMLEAGVNVGLGTDGAASNNNLDMFEEMRLAALLQKLA----HGDPTALPAEEALEMATIGG 345 (411)
T ss_pred ---hhh-----hCCCCHHHHHHCCCcEEEeCCCCccCCCcCHHHHHHHHHHHhccc----cCCCCcCCHHHHHHHHHhhH
Confidence 111 3456899999999999999998754 468888887765432211 11235799999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCCCC--Chhhh--------cCCeEEEEEECcEEeCC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE--------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~~~~~--------~~~~v~~v~v~G~~v~~ 547 (547)
|+++|++ ++|+|++||.|||+++|.+.+. +..++ ...++..||++|++||.
T Consensus 346 A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~G~~v~~ 406 (411)
T cd01298 346 AKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDPISHLVYSANGGDVDTVIVNGRVVME 406 (411)
T ss_pred HHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccchhhHheEecCCCCeeEEEECCEEEEE
Confidence 9999999 6899999999999999998543 11222 25699999999999973
No 10
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=7.8e-33 Score=286.37 Aligned_cols=360 Identities=20% Similarity=0.294 Sum_probs=229.5
Q ss_pred ccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
.+++|+|++|+++++....+++|+|++|+|.+|++... ++..++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~-----~~~~~~id~~g~~v~PG~vd~H~H~~~~~~------- 69 (430)
T PRK06038 2 ADIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTP-----GDADTVIDAKGSVVMPGLVNTHTHAAMTLF------- 69 (430)
T ss_pred CCEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCC-----CCCCEEEeCCCCEEecCeeecccCcchhhh-------
Confidence 46899999999887554567799999999999998532 234589999999999999999999864421
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
. |.+ ...+...+++..
T Consensus 70 ~--------------------------g~~-------~~~~~~~~~~~~------------------------------- 85 (430)
T PRK06038 70 R--------------------------GYA-------DDLPLAEWLNDH------------------------------- 85 (430)
T ss_pred h--------------------------hcc-------CCCCHHHHHHhh-------------------------------
Confidence 0 000 000111111110
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
........+.++.+...+....++.+.|+|++.|+... ..
T Consensus 86 ----------------------------~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~---------~~--- 125 (430)
T PRK06038 86 ----------------------------IWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYFY---------MD--- 125 (430)
T ss_pred ----------------------------hhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccccC---------HH---
Confidence 00001234556666677777888888899988876421 01
Q ss_pred HHHHHHhhCCCCeeEEEEcc---C---cc----chhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc----
Q 008993 285 DVYQWASYSEKMKIRVCLFF---P---LE----TWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE---- 349 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~---~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~---- 349 (547)
...+.+ .+.+ +|..... . .+ ..++..+++..........+.. .+.-......+. .+..
T Consensus 126 ~~~~a~-~~~G--iR~~~~~~~~d~~~~~~~~~~l~~~~~~i~~~~~~~~g~v~~----~~~~~~~~~~s~e~l~~~~~~ 198 (430)
T PRK06038 126 EVAKAV-EESG--LRAALSYGMIDLGDDEKGEAELKEGKRFVKEWHGAADGRIKV----MYGPHAPYTCSEEFLSKVKKL 198 (430)
T ss_pred HHHHHH-HHhC--CeEEEEchhccCCCccchHHHHHHHHHHHHHhcCCCCCceEE----EEeCCcCccCCHHHHHHHHHH
Confidence 222222 2223 3332211 0 01 1122333333221111111111 011111111111 1110
Q ss_pred -------eeEEecccHHHHHHHHH-H----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH
Q 008993 350 -------VAIHAIGDRANDLVLDM-Y----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS 417 (547)
Q Consensus 350 -------v~~H~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~ 417 (547)
+++|+.+.......... + -+.+.+.+..+++..++|+.++++++++++++.|+.+++||.++..
T Consensus 199 A~~~g~~v~~H~~e~~~~~~~~~~~~G~~~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~---- 274 (430)
T PRK06038 199 ANKDGVGIHIHVLETEAELNQMKEQYGMCSVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMK---- 274 (430)
T ss_pred HHHcCCcEEEEcCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhh----
Confidence 89998766543322222 1 1234566788899999999999999999999999999999986541
Q ss_pred HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 418 ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 418 ~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
++ .+.+|+++++++|+++++|||++.+ +.|++.+++.+..+.... .....+++++++|+|+|.||
T Consensus 275 ----~~-----~~~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~----~~~~~~~~~~~al~~aT~~g 341 (430)
T PRK06038 275 ----LA-----SGIAPVPKLLERGVNVSLGTDGCASNNNLDMFEEMKTAALLHKVN----TMDPTALPARQVLEMATVNG 341 (430)
T ss_pred ----hc-----cCCCCHHHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhhhc----cCCCCcCCHHHHHHHHhHHH
Confidence 12 4556899999999999999997643 578999998876543311 11245789999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCC-----CC-Chhhh----cCCeEEEEEECcEEeC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSS-----WE-DFAAE----VSASIEATYVSGVQAY 546 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~-----~~-~~~~~----~~~~v~~v~v~G~~v~ 546 (547)
|+.+|++ .|+|++||.|||+++|.+. .. +...+ ...+|..|||+|+++|
T Consensus 342 A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~~~~~~~~v~~~~~~~v~~v~v~G~~v~ 400 (430)
T PRK06038 342 AKALGIN--TGMLKEGYLADIIIVDMNKPHLTPVRDVPSHLVYSASGSDVDTTIVDGRILM 400 (430)
T ss_pred HHHhCCC--CCccCCCcccCEEEEeCCCCccCCCCChHHheeEeCCCCceeEEEECCEEEE
Confidence 9999996 5999999999999999873 23 22233 2458999999999986
No 11
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=3.3e-33 Score=288.57 Aligned_cols=376 Identities=24% Similarity=0.256 Sum_probs=226.6
Q ss_pred cccEEEEcCEEEeCCCC------CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDDS------LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~------~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 117 (547)
|++++|+|++|+++++. ..++++|+|+||||++||+..+... ....++||++|++|||||||+|+|+.....
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~--~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~ 79 (406)
T PRK09356 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA--AYAAEVIDAGGKLVTPGLIDCHTHLVFGGN 79 (406)
T ss_pred CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc--ccCceEEECCCCEEeeceEecCCCcccCCC
Confidence 46799999999998653 3467799999999999998654311 123589999999999999999999864311
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHH
Q 008993 118 QMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQ 197 (547)
Q Consensus 118 ~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~ 197 (547)
.. .++..... .. ...+.+.
T Consensus 80 ----------~~-~~~~~~~~------------------------~~---~~~~~~~----------------------- 98 (406)
T PRK09356 80 ----------RA-NEFELRLQ------------------------GV---SYEEIAA----------------------- 98 (406)
T ss_pred ----------cH-HHHHHHHC------------------------CC---cHHHHHH-----------------------
Confidence 00 00000000 00 0000000
Q ss_pred HcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccc
Q 008993 198 LVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQ 277 (547)
Q Consensus 198 ~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 277 (547)
. .++ . ...+ ......+.+++....+.++..+.+.|+|++.++..+. ...
T Consensus 99 ~----------~~~------------~-----~~~~-~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~--~~~- 147 (406)
T PRK09356 99 Q----------GGG------------I-----LSTV-RATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYG--LDL- 147 (406)
T ss_pred h----------cCC------------h-----HHHH-HHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCC--CCH-
Confidence 0 000 0 0000 0012355677778888899999999999998764221 111
Q ss_pred cchhHHHHHHHHHhhCCCCeeEEEEc----cCcc---chhh----HHH-HHHhcCCCCCCcEEEceEEEEEcCCcC---c
Q 008993 278 LSWEDFADVYQWASYSEKMKIRVCLF----FPLE---TWSS----LAD-LINKTGHVLSDWVYLGGVKAFADGSLG---S 342 (547)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~---~ 342 (547)
....+..+.++.+..+.++.+...+. ++.. ...+ ..+ ........ . .....+.+...... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~i~~~~~~~~~~~~~ 223 (406)
T PRK09356 148 ETELKMLRVARRLGEEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEE--G--LADAVDVFCETGAFSVEQ 223 (406)
T ss_pred HHHHHHHHHHHHHhhhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhc--C--CcceEEEEecCCCCCHHH
Confidence 11123344555555444333332221 1111 1011 111 11111100 0 12223333322111 1
Q ss_pred chhhhh---c----eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCCh
Q 008993 343 NSALFH---E----VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDA 415 (547)
Q Consensus 343 ~~~~~~---~----v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~ 415 (547)
....+. + +++|+........ .+... ..+ ...+.|+.++++++++++++.|+.+.+||.++..
T Consensus 224 l~~~~~~A~~~g~~v~~H~~~~~~~~~----~~~~~-~~~----~~~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~-- 292 (406)
T PRK09356 224 SERVLEAAKALGLPVKIHAEQLSNLGG----AELAA-EYG----ALSADHLEYLDEAGIAAMAEAGTVAVLLPGAFYF-- 292 (406)
T ss_pred HHHHHHHHHHCCCCEEEEEecccCCCH----HHHHH-HcC----CcEehHhhcCCHHHHHHHHHhCCEEEECccchhh--
Confidence 111111 0 7888753211111 11111 112 4578999999999999999999999999986542
Q ss_pred hHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 416 DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 416 ~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
++. ....|++.+.++|+++++|||++. ..+++..++..+.... ...+++++++++++|.||
T Consensus 293 ------l~~----~~~~~~~~l~~~Gi~v~lgtD~~~-~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~~~T~~~ 353 (406)
T PRK09356 293 ------LRE----TQYPPARLLRDAGVPVALATDFNP-GSSPTESLLLAMNMAC--------TLFRLTPEEALAAVTINA 353 (406)
T ss_pred ------cCc----ccCchHHHHHHCCCeEEEeCCCCC-CCChhHHHHHHHHHHh--------hhcCCCHHHHHHHHHHHH
Confidence 111 335689999999999999999743 1345666665543211 245789999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+++|+++++|+|++||.|||+++|.|++. ........+|..||++|++||+
T Consensus 354 A~~~g~~~~~G~i~~G~~AD~vvld~~~~~~~~~~~~~~~v~~v~v~G~~vy~ 406 (406)
T PRK09356 354 ARALGRQDTHGSLEVGKKADLVIWDAPSPAELPYHFGVNPVETVVKNGEVVVD 406 (406)
T ss_pred HHHhCCCCCceeeCCCCcCCEEEECCCchhhhhhhhCCCCccEEEECCEEeeC
Confidence 999999988999999999999999999876 3344446699999999999996
No 12
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=8.6e-33 Score=288.51 Aligned_cols=370 Identities=22% Similarity=0.271 Sum_probs=230.4
Q ss_pred EEEEcCEEEeCCCCC--ceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 47 LVVTNGVIFTGDDSL--LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 47 ~li~n~~v~~~~~~~--~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
+++.|+.|+++++.. ..+++|+|+||||++|++..+.. .+++++||++|++|||||||+|+|++.....
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~---~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~------ 74 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALP---QPADEVFDARGHVVTPGLVNTHHHFYQTLTR------ 74 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCC---CCCCeEEeCCCCEEecceEeccccccchhcc------
Confidence 445557899987753 57789999999999999965421 1356899999999999999999999754210
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
|... .. ..+...++
T Consensus 75 -g~~~------------------------~~-------~~~~~~~~---------------------------------- 88 (451)
T PRK08203 75 -ALPA------------------------AQ-------DAELFPWL---------------------------------- 88 (451)
T ss_pred -cccc------------------------cC-------CCcHHHHH----------------------------------
Confidence 0000 00 00000000
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
..+.......++++.+.....+..++.+.|+|++.++....+... .....
T Consensus 89 --------------------------~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~----~~~~~ 138 (451)
T PRK08203 89 --------------------------TTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGL----RDALD 138 (451)
T ss_pred --------------------------HHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccc----cchHH
Confidence 000111134567788888888899999999999998753222110 01122
Q ss_pred HHHHHHhhCCCCeeEEEEcc------------Ccc----chh----hHHHHHHhcCCC-CCCcEEEceEEEEEcCCcCcc
Q 008993 285 DVYQWASYSEKMKIRVCLFF------------PLE----TWS----SLADLINKTGHV-LSDWVYLGGVKAFADGSLGSN 343 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~------------~~~----~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~ 343 (547)
...+...+ -+ +|..... ... ... ...+.+...... ..+++.. + +.-.+....
T Consensus 139 ~~~~a~~~-~G--~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~-~---~~~~~~~~~ 211 (451)
T PRK08203 139 DQIEAARE-IG--MRFHATRGSMSLGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRI-A---LAPCSPFSV 211 (451)
T ss_pred HHHHHHHH-cC--CeEEEecceeecCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEE-E---EecCCCCcC
Confidence 22222222 22 3332210 000 111 122222221110 0122221 0 111111111
Q ss_pred hh-hhhc-----------eeEEec-ccHHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEe
Q 008993 344 SA-LFHE-----------VAIHAI-GDRANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASM 406 (547)
Q Consensus 344 ~~-~~~~-----------v~~H~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~ 406 (547)
+. .+.+ +++|+. +......+.+.+ -+.+.+.+..+++..++|+.+++++++++|++.|+.+.+
T Consensus 212 ~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~ 291 (451)
T PRK08203 212 SRELMRESAALARRLGVRLHTHLAETLDEEAFCLERFGMRPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAH 291 (451)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEE
Confidence 11 1111 788864 222333333322 123456678888999999999999999999999999999
Q ss_pred cCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCH
Q 008993 407 QPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISL 484 (547)
Q Consensus 407 ~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 484 (547)
||.++. +++ ...++++.++++|+++++|||++.+ ..+++.+++.++....... ....+++
T Consensus 292 ~P~~~~--------~l~-----~~~~~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~ 353 (451)
T PRK08203 292 CPCSNM--------RLA-----SGIAPVRELRAAGVPVGLGVDGSASNDGSNLIGEARQALLLQRLRY-----GPDAMTA 353 (451)
T ss_pred CcHHhh--------hhc-----cCCCCHHHHHHCCCeEEEecCCCccCCCcCHHHHHHHHHHHhhccc-----CCCCCCH
Confidence 998543 222 4567899999999999999998754 4689999887665432110 1346899
Q ss_pred HHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC------Chhhhc---CCeEEEEEECcEEeCC
Q 008993 485 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE------DFAAEV---SASIEATYVSGVQAYP 547 (547)
Q Consensus 485 ~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~------~~~~~~---~~~v~~v~v~G~~v~~ 547 (547)
.++++++|.|||+++|++ .+|+|++||.|||+++|.++.. +...+. ..+|..||++|++||+
T Consensus 354 ~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d~~~~~~~~~~~p~~~l~~~~~~~v~~v~v~G~~v~~ 424 (451)
T PRK08203 354 REALEWATLGGARVLGRD-DIGSLAPGKLADLALFDLDELRFAGAHDPVAALVLCGPPRADRVMVGGRWVVR 424 (451)
T ss_pred HHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEcCCccccCCccChHHHHHccCCCCccEEEECCEEEEE
Confidence 999999999999999998 5899999999999999987543 112221 3589999999999873
No 13
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=1.5e-32 Score=286.06 Aligned_cols=374 Identities=21% Similarity=0.236 Sum_probs=230.8
Q ss_pred cccEEEEcCE-EEeCCCC--Cceee-EEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccc
Q 008993 44 EADLVVTNGV-IFTGDDS--LLFAD-SMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (547)
Q Consensus 44 ~~~~li~n~~-v~~~~~~--~~~~~-~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~ 119 (547)
|.+++|+|++ |++.... ...++ +|+|+||+|++||+... ++++++||++|++|+|||||+|+|+++...
T Consensus 1 ~~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~-----~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~-- 73 (457)
T PRK12393 1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGALTP-----LPGERVIDATDCVVYPGWVNTHHHLFQSLL-- 73 (457)
T ss_pred CCcEEEECCeEEEecCCCccccccCceEEEECCEEEEEeccCC-----CCCCeEEeCCCCEEecCEeecccCcccccc--
Confidence 4678999996 7776543 23444 89999999999998321 256799999999999999999999975422
Q ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 008993 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (547)
Q Consensus 120 ~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~ 199 (547)
.|.... ...+...++...
T Consensus 74 -------------------------------rg~~~~-----~~~~~~~wl~~~-------------------------- 91 (457)
T PRK12393 74 -------------------------------KGVPAG-----INQSLTAWLAAV-------------------------- 91 (457)
T ss_pred -------------------------------cccccc-----cCCchHHHhhhC--------------------------
Confidence 010000 000001111100
Q ss_pred CCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccc
Q 008993 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (547)
Q Consensus 200 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 279 (547)
.+......++++.+...+.++.++++.|+|++.|+........ .
T Consensus 92 ---------------------------------~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~---~ 135 (457)
T PRK12393 92 ---------------------------------PYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGM---P 135 (457)
T ss_pred ---------------------------------cchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhccccc---c
Confidence 0001123567788888899999999999999998752111111 1
Q ss_pred hhHHHHHHHHHhhCCCCeeEEEEcc-------------Cc----cchhhHH----HHHHhcCCCCCCcEEEceEEEEEcC
Q 008993 280 WEDFADVYQWASYSEKMKIRVCLFF-------------PL----ETWSSLA----DLINKTGHVLSDWVYLGGVKAFADG 338 (547)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~ 338 (547)
. +..+...++..+-+ +|..+.. +. +..++.. .+...........+. .+. ++-.
T Consensus 136 ~-~~~~~~~~a~~~~G--~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~-~~~~ 209 (457)
T PRK12393 136 F-DTGDILFDEAEALG--MRFVLCRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLR--RVV-VAPT 209 (457)
T ss_pred c-chHHHHHHHHHHcC--CeEEEEccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCce--EEE-EcCC
Confidence 1 11222223333333 3433210 00 1111111 111111100000000 010 1101
Q ss_pred Cc-Ccch-hhhhc-----------eeEEec-ccHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhC
Q 008993 339 SL-GSNS-ALFHE-----------VAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ 400 (547)
Q Consensus 339 ~~-~~~~-~~~~~-----------v~~H~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~ 400 (547)
.. ...+ ..+.+ +++|+. +..+++...+.+. +.+...+.++++..++|+.++++++++++++.
T Consensus 210 ~~~~~~~~e~l~~~~~~a~~~g~~~~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~ 289 (457)
T PRK12393 210 TPTFSLPPELLREVARAARGMGLRLHSHLSETVDYVDFCREKYGMTPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQT 289 (457)
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHc
Confidence 11 1111 11111 888875 2223333333221 23345677788999999999999999999999
Q ss_pred CcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCC
Q 008993 401 GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIP 478 (547)
Q Consensus 401 g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (547)
|+.+.+||.++. +++ .+.+|+++|.++|+++++|||++.+ +.+++.+++.+..+.... ..
T Consensus 290 g~~v~~~P~sn~--------~lg-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-----~~ 351 (457)
T PRK12393 290 GTGIAHCPQSNG--------RLG-----SGIAPALAMEAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-----GG 351 (457)
T ss_pred CCeEEECchhhh--------hhc-----ccCCCHHHHHHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-----CC
Confidence 999999997542 333 4557899999999999999998654 578999998876654311 12
Q ss_pred CCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--Ch--------hhhcCCeEEEEEECcEEeCC
Q 008993 479 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DF--------AAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 479 ~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~~--------~~~~~~~v~~v~v~G~~v~~ 547 (547)
...++++++++++|.|||+++|+++ +|+|++||.|||+++|.++.. +. ......+|..||++|+++|.
T Consensus 352 ~~~~~~~~~l~~~T~~~A~~l~~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 429 (457)
T PRK12393 352 ADATTVEDVVHWGTAGGARVLGLDA-IGTLAVGQAADLAIYDLDDPRFFGLHDPAIAPVACGGPAPVKALLVNGRPVVE 429 (457)
T ss_pred CCCCCHHHHHHHHhHHHHHHhCCCC-CCCcCCCCcCCEEEEeCCCcccCCCCCchhhhhccCCCCCeeEEEECCEEEEE
Confidence 3468999999999999999999986 899999999999999987432 11 11125689999999999863
No 14
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=1.9e-32 Score=283.47 Aligned_cols=356 Identities=18% Similarity=0.250 Sum_probs=224.5
Q ss_pred cEEEEcCEEEeCCCC-CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 46 DLVVTNGVIFTGDDS-LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 46 ~~li~n~~v~~~~~~-~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
+++|+|++|+++++. ...+++|+|+||||++||+... ...++||++|++|+|||||+|+|+.....
T Consensus 2 ~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~------- 68 (418)
T PRK06380 2 SILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE------EADYIIDATGKVVMPGLINTHAHVGMTAS------- 68 (418)
T ss_pred eEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC------CCCEEEECCCCEEccCEEeeccCCCcccc-------
Confidence 479999999998643 3467799999999999998532 34689999999999999999999864422
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
.|.. ...+...++..
T Consensus 69 rg~~---------------------------------~~~~l~~~~~~-------------------------------- 83 (418)
T PRK06380 69 KGLF---------------------------------DDVDLEEFLMK-------------------------------- 83 (418)
T ss_pred CCcc---------------------------------cCCCHHHHHHH--------------------------------
Confidence 0000 00011111111
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
+.......++++.+...+..+.++.+.|+|++.++... .+.
T Consensus 84 ----------------------------~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~---------~~~-- 124 (418)
T PRK06380 84 ----------------------------TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYS---------EDI-- 124 (418)
T ss_pred ----------------------------HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccC---------hHH--
Confidence 00111335667777788888889999999999876421 111
Q ss_pred HHHHHHhhCCCCeeEEEEcc---Ccc-------chhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc----
Q 008993 285 DVYQWASYSEKMKIRVCLFF---PLE-------TWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE---- 349 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~---- 349 (547)
..+.+.+. ++|.++.. ..+ ...+..++++.... ...+.. ++ .-+.+...+. .+..
T Consensus 125 -~~~a~~~~---G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~-~~---~~~~~~~~s~e~l~~~~~~ 194 (418)
T PRK06380 125 -IAKAAEEL---GIRAFLSWAVLDEEITTQKGDPLNNAENFIREHRN--EELVTP-SI---GVQGIYVANDETYLKAKEI 194 (418)
T ss_pred -HHHHHHHh---CCeEEEecccccCCcccccchHHHHHHHHHHHhcC--CCCeEE-EE---ECCCCccCCHHHHHHHHHH
Confidence 22222222 23443311 100 11223333332111 111111 00 1011111111 1111
Q ss_pred -------eeEEeccc-HHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH
Q 008993 350 -------VAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS 417 (547)
Q Consensus 350 -------v~~H~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~ 417 (547)
+++|+.+. .++....... -+.+...+..+.+..+.|+.++++++++++++.|+.+.+||.++.
T Consensus 195 A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~----- 269 (418)
T PRK06380 195 AEKYDTIMHMHLSETRKEVYDHVKRTGERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNF----- 269 (418)
T ss_pred HHHcCCCEEEEeCCcHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHH-----
Confidence 88888643 2222222211 123344567778999999999999999999999999999998542
Q ss_pred HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 418 ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 418 ~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
+++. .+.+|+++++++|+++++|||++.+ ..+++.+++.+...... ..+ ....++++++|+++|.|+
T Consensus 270 ---~l~~----~g~~p~~~~~~~Gv~v~lGTD~~~~~~~~d~~~~~~~~~~~~~~---~~~-~~~~~~~~~~l~~aT~~g 338 (418)
T PRK06380 270 ---KLGT----GGSPPIPEMLDNGINVTIGTDSNGSNNSLDMFEAMKFSALSVKN---ERW-DASIIKAQEILDFATINA 338 (418)
T ss_pred ---hhcc----CCCCcHHHHHHCCCeEEEcCCCCcCCCCcCHHHHHHHHHHHhhh---ccC-CCCcCCHHHHHHHHHHHH
Confidence 2221 2467899999999999999998653 46899998876543221 111 122589999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCC-CCC-C------hhhhc----CCeEEEEEECcEEeC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTS-SWE-D------FAAEV----SASIEATYVSGVQAY 546 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d-~~~-~------~~~~~----~~~v~~v~v~G~~v~ 546 (547)
|+.||++ .|+|++||+|||+++|.+ |.. + ..++. ..+|..|||+|++++
T Consensus 339 A~~lg~~--~G~l~~G~~ADlvv~d~~~~~~~p~~~~~~~~~lv~~~~~~~v~~v~v~G~~v~ 399 (418)
T PRK06380 339 AKALELN--AGSIEVGKLADLVILDARAPNMIPTRKNNIVSNIVYSLNPLNVDHVIVNGKILK 399 (418)
T ss_pred HHHhCCC--CCccCCCccCCEEEEeCCCCccCCCCccChHHheeecCCCCceeEEEECCEEEE
Confidence 9999994 799999999999999987 222 2 23322 458999999999986
No 15
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=2.1e-32 Score=282.70 Aligned_cols=178 Identities=26% Similarity=0.332 Sum_probs=139.1
Q ss_pred eeEEec-ccHHHHHHHHHH------HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhh
Q 008993 350 VAIHAI-GDRANDLVLDMY------KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKL 422 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 422 (547)
+++|.. +....+.+.+.+ -+.+.+.|.++++..+.|+.++++++++++++.|+.+.+||.++. ++
T Consensus 228 i~~Hl~E~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~--------~l 299 (433)
T PRK09228 228 IQTHLSENLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNL--------FL 299 (433)
T ss_pred eEEeecCChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHH--------hh
Confidence 788875 334444444322 234566788889999999999999999999999999999999653 12
Q ss_pred ChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 423 GVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 423 g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+ .+.++++.+.++|+++++|||++. .+.+++..++.+..... ....+++++++|+++|.|||+++|+
T Consensus 300 g-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~l~~aT~~~A~~lg~ 367 (433)
T PRK09228 300 G-----SGLFDLKRADAAGVRVGLGTDVGGGTSFSMLQTMNEAYKVQQ-------LQGYRLSPFQAFYLATLGGARALGL 367 (433)
T ss_pred c-----CCCcCHHHHHHCCCeEEEecCCCCCCCCCHHHHHHHHHHHhh-------cccCCCCHHHHHHHHhHHHHHHhCC
Confidence 2 456789999999999999999865 35689999887765422 1345689999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCC---C-----------hhhhc----CCeEEEEEECcEEeCC
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWE---D-----------FAAEV----SASIEATYVSGVQAYP 547 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~---~-----------~~~~~----~~~v~~v~v~G~~v~~ 547 (547)
++++|+|++||+|||++++.+... + +..+. ..+|+.|||||++|+.
T Consensus 368 ~~~~G~l~~Gk~ADlvv~d~~~~~~~~~~~~~~~~~~d~~~~lv~~~~~~~V~~v~VdG~~v~~ 431 (433)
T PRK09228 368 DDRIGNLAPGKEADFVVLDPAATPLLALRTARAESLEELLFALMTLGDDRAVAETYVAGRPVYR 431 (433)
T ss_pred CCCCcccCCCCCCCEEEEcCCCCccccchhcccCCHHHHHHHHhhcCCccceeEEEECCEEecc
Confidence 987999999999999999987421 1 11121 6799999999999874
No 16
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=5.3e-32 Score=281.63 Aligned_cols=372 Identities=17% Similarity=0.153 Sum_probs=226.8
Q ss_pred EEEEcCEEEeCCCC--CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 47 LVVTNGVIFTGDDS--LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 47 ~li~n~~v~~~~~~--~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
++|+|++|+++++. ...+++|+|+||+|++||+....... .+..++||++|++|+|||||+|+|+.....
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~-~~~~~viD~~g~lv~PGfID~H~H~~~~~~------- 73 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAK-YPDAEFIDAKGKLIMPGLINSHNHIYSGLA------- 73 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccc-cCCCeEEeCCCCEEecceeeccccchhhhh-------
Confidence 58999999986443 23567999999999999975433211 145689999999999999999999864321
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
.|.+.+.. .......++.
T Consensus 74 --------------------------rg~~~~~~---~~~~l~~~l~--------------------------------- 91 (442)
T PRK07203 74 --------------------------RGMMANIP---PPPDFISILK--------------------------------- 91 (442)
T ss_pred --------------------------cccccccC---CCCCHHHHHH---------------------------------
Confidence 00000000 0000000000
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
...+...+.+++++.+...+.++.++.+.|+|++.++..... ..+ ...
T Consensus 92 --------------------------~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~--~~~----~~~ 139 (442)
T PRK07203 92 --------------------------NLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPN--YIG----GSL 139 (442)
T ss_pred --------------------------hheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccc--ccc----chH
Confidence 001111234566777777777888889999999988742110 011 111
Q ss_pred HHHHHHhhCCCCeeEEEEccC---c---cc----hhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc----
Q 008993 285 DVYQWASYSEKMKIRVCLFFP---L---ET----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE---- 349 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~---~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~---- 349 (547)
+...+..++- ++|..+... . +. ..+..+++..........+.. .+.-......+. .+..
T Consensus 140 ~~~~~a~~~~--GiR~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~----~~~p~~~~~~s~~~l~~~~~l 213 (442)
T PRK07203 140 FTIADAAKKV--GLRAMLCYETSDRDGEKELQEGVEENIRFIKHIDEAKDDMVEA----MFGLHASFTLSDATLEKCREA 213 (442)
T ss_pred HHHHHHHHHh--CCeEEEecccccCCcchhHHHHHHHHHHHHHHhcCCCCCceEE----EEccCCCcCcCHHHHHHHHHH
Confidence 2222222222 334333211 0 11 112222222211111111111 011111111111 1111
Q ss_pred -------eeEEec-ccHHHHHHHHH----HHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH
Q 008993 350 -------VAIHAI-GDRANDLVLDM----YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS 417 (547)
Q Consensus 350 -------v~~H~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~ 417 (547)
+++|.. +..+...+.+. .-+.+.+.|.++++..+.||.++++++++.+++.|+.+++||.++..
T Consensus 214 A~~~g~~i~~H~~E~~~e~~~~~~~~g~~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~---- 289 (442)
T PRK07203 214 VKETGRGYHIHVAEGIYDVSDSHKKYGKDIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMG---- 289 (442)
T ss_pred HHHcCCcEEEEecCChHHHHHHHHHcCCCHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhh----
Confidence 888875 33344443332 12355667888999999999999999999999999999999986642
Q ss_pred HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 418 ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 418 ~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
++ .+.+|+++|.++|+++++|||+. ..|++.+++.+....... ..+..++++++++|+|.+||+
T Consensus 290 ----l~-----~g~~p~~~~~~~Gv~v~lGtD~~--~~d~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~aT~~gA~ 353 (442)
T PRK07203 290 ----NA-----VGYNPVLEMIKNGILLGLGTDGY--TSDMFESYKVANFKHKHA-----GGDPNVGWPESPAMLFENNNK 353 (442)
T ss_pred ----cc-----cCCCCHHHHHHCCCeEEEcCCCC--CccHHHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHHHHH
Confidence 22 55678999999999999999974 358999988875433211 112234578999999999999
Q ss_pred Hcc--cCCCcccccCCCcccEEEEcCCCCC--Chh----hh----cCCeEEEEEECcEEeC
Q 008993 498 ACF--LENDVGSLSPGKIADFVILSTSSWE--DFA----AE----VSASIEATYVSGVQAY 546 (547)
Q Consensus 498 ~lg--l~~~~GsI~~Gk~ADlvv~d~d~~~--~~~----~~----~~~~v~~v~v~G~~v~ 546 (547)
++| +++++|+|+|||.|||+++|.+... +.. .+ ...+|..|||+|++||
T Consensus 354 ~lg~~~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G~~v~ 414 (442)
T PRK07203 354 IAERYFGAKFGILEEGAKADLIIVDYNPPTPLNEDNINGHILFGMNGGSVDTTIVNGKVVM 414 (442)
T ss_pred HHHHhcCCCCCCCCCCCccCEEEEcCCCCeecCccccccceEeecCCCceEEEEECCEEEE
Confidence 999 4667899999999999999976422 111 22 1668999999999986
No 17
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=4.4e-32 Score=275.73 Aligned_cols=354 Identities=21% Similarity=0.249 Sum_probs=216.9
Q ss_pred EEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccCC
Q 008993 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (547)
Q Consensus 47 ~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~g 126 (547)
++|+|++|+++....+.+++|+|++|+|.+|++.. +..++||++|++| |||||+|+|+.....
T Consensus 2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~-------~~~~~id~~g~~v-PGlvd~H~H~~~~~~--------- 64 (375)
T PRK07213 2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV-------HEGNVIDAKGLVI-PPLINAHTHIGDSSI--------- 64 (375)
T ss_pred EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC-------CCCeEEeCCCCEe-cceeeeccccCchhh---------
Confidence 68999999998765556778999999999998741 3568999999999 999999999864311
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCC
Q 008993 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (547)
Q Consensus 127 ~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 206 (547)
.|.+++ .+...++.. |.
T Consensus 65 ------------------------rg~~~~-------~~l~~~~~~-----~~--------------------------- 81 (375)
T PRK07213 65 ------------------------KDIGIG-------KSLDELVKP-----PN--------------------------- 81 (375)
T ss_pred ------------------------hcCCCC-------CCHHHHccC-----CC---------------------------
Confidence 011100 000000000 00
Q ss_pred CCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHH
Q 008993 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (547)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (547)
|.. . ......++++.....+....++.+.|+|++.|+.... . ...+.
T Consensus 82 ----------------~~~-----~---~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~--------~-~~~~~ 128 (375)
T PRK07213 82 ----------------GLK-----H---KFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGG--------I-KGINL 128 (375)
T ss_pred ----------------cch-----H---HHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcC--------h-hHHHH
Confidence 000 0 0013457788888889999999999999999863210 0 11222
Q ss_pred HHHHhhCCCCeeEEEEccCc--cchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc----eeEEecc-cHH
Q 008993 287 YQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE----VAIHAIG-DRA 359 (547)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----v~~H~~~-~~~ 359 (547)
+.++.. +++++..+.... ...+...+.++...+. .+.+...+...+.+..+........+ +++|+.. ..+
T Consensus 129 ~~~a~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e 205 (375)
T PRK07213 129 LKKASS--DLPIKPIILGRPTEADENELKKEIREILKN-SDGIGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGS 205 (375)
T ss_pred HHHHHH--cCCCceEEecCCCcccchhhHHHHHHHHHh-cccccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhH
Confidence 333322 234444322111 1111222222211110 00011111100000000000000000 8888752 222
Q ss_pred HHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHH
Q 008993 360 NDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQ 435 (547)
Q Consensus 360 ~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~ 435 (547)
.....+.+ -+...+.|.. ++ .++|+.+++++++++|++.|+.+.+||.++.. ++ .+.+|++
T Consensus 206 ~~~~~~~~G~~~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~--------l~-----~g~~~v~ 270 (375)
T PRK07213 206 VEYSLEKYGMTEIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANAS--------FN-----VGLPPLN 270 (375)
T ss_pred HHHHHHHcCCChHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhh--------hc-----cCCccHH
Confidence 22222221 1122334543 44 68999999999999999999999999997642 12 5567899
Q ss_pred HHHHCCCeeeecCCCCCC-CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcc
Q 008993 436 SLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIA 514 (547)
Q Consensus 436 ~l~~~Gv~~~~GTD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~A 514 (547)
+|+++|+++++|||+..+ ..+++.+++.+... .++++.++++++|.|+|++||+++ .|+|+|||+|
T Consensus 271 ~l~~~Gv~v~lGTD~~~~~~~~~~~e~~~~~~~------------~~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~A 337 (375)
T PRK07213 271 EMLEKGILLGIGTDNFMANSPSIFREMEFIYKL------------YHIEPKEILKMATINGAKILGLIN-VGLIEEGFKA 337 (375)
T ss_pred HHHHCCCEEEEeeCCCCCchHhHHHHHHHHHHH------------hCcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCcc
Confidence 999999999999998543 35788888875432 358999999999999999999986 8999999999
Q ss_pred cEEEEcCCCCC----Chhhhc----CCeEEEEEECcEE
Q 008993 515 DFVILSTSSWE----DFAAEV----SASIEATYVSGVQ 544 (547)
Q Consensus 515 Dlvv~d~d~~~----~~~~~~----~~~v~~v~v~G~~ 544 (547)
||+++|.+.+. +...+. ...|..||||||+
T Consensus 338 Dlvv~d~~~~~p~~dp~~~lV~~~~~~~v~~v~v~G~~ 375 (375)
T PRK07213 338 DFTFIKPTNIKFSKNPYASIITRCESGDIVNKILKGKL 375 (375)
T ss_pred cEEEEcCccccccCCchHHHhhhccCCCceEEEECCcC
Confidence 99999865222 333332 5689999999984
No 18
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=2e-31 Score=276.37 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=134.2
Q ss_pred eeEEec-ccHHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|.. +......+.+.+ -+.+.+.|.++++..+.||.++++++++.+++.|+.+++||.++. +++
T Consensus 220 i~~H~~E~~~e~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~--------~l~- 290 (441)
T TIGR03314 220 FHIHVAEDIYDVEDSHHKYGKDIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNM--------GNA- 290 (441)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHh--------hhc-
Confidence 888876 333344333332 234566788999999999999999999999999999999998664 222
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc--cC
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF--LE 502 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg--l~ 502 (547)
.+.+|+++|+++|+++++|||+. +.|++.+|+.+....+... .+....+.++++|+|.++|+.+| +.
T Consensus 291 ----~G~~p~~~~~~~Gv~v~LGtD~~--~~d~~~em~~a~~~~~~~~-----~~~~~~~~~~~~~aT~~ga~al~~~l~ 359 (441)
T TIGR03314 291 ----VGYNPVLRMFKNGILLGLGTDGY--TSDMFESLKFANFKHKDAG-----GDLNAAWPESPAMLFENNNEIAERNFG 359 (441)
T ss_pred ----cCCCCHHHHHHCCCEEEEcCCCC--CcCHHHHHHHHHHHhcccc-----CCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 55678999999999999999974 3599999998876533111 11223457899999999999997 45
Q ss_pred CCcccccCCCcccEEEEcCCCCC--Chhh----h----cCCeEEEEEECcEEeC
Q 008993 503 NDVGSLSPGKIADFVILSTSSWE--DFAA----E----VSASIEATYVSGVQAY 546 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~~--~~~~----~----~~~~v~~v~v~G~~v~ 546 (547)
+++|+|++||+|||+++|.+... +..+ + ...+|..|||+|++||
T Consensus 360 ~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~ 413 (441)
T TIGR03314 360 AKFGRLEPGAKADLIIVDYNAPTPLTADNINGHILFGMNGGSVDSTMVNGKVVM 413 (441)
T ss_pred CCCCCCCCCCcccEEEEcCCCCeeechhhccccceecCCCCeeEEEEECCEEEE
Confidence 56899999999999999976332 1111 1 2668999999999986
No 19
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=5e-32 Score=280.05 Aligned_cols=179 Identities=21% Similarity=0.228 Sum_probs=136.3
Q ss_pred eeEEecc-cHHHHHHHHHHH------HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhh
Q 008993 350 VAIHAIG-DRANDLVLDMYK------SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKL 422 (547)
Q Consensus 350 v~~H~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 422 (547)
+++|... ...++.+...+. +.+...|.++++..++||.++++++++++++.|+.+.+||.++.. +
T Consensus 225 v~~H~~e~~~e~~~~~~~~g~~~~p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~--------l 296 (429)
T cd01303 225 IQTHISENLDEIAWVKELFPGARDYLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLF--------L 296 (429)
T ss_pred EEEeeCCCHHHHHHHHHHcCCCCCHHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhh--------h
Confidence 7888753 333443333221 345566778889999999999999999999999999999986541 2
Q ss_pred ChhhhhhhchHHHHHHHCCCeeeecCCCCCC-CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 423 GVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 423 g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+ .+.++++++.++|+++++|||++.+ +.+++.+++.+........ .......+++++++|+|+|.|||+++|+
T Consensus 297 ~-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~aT~~gA~~lg~ 370 (429)
T cd01303 297 G-----SGLFDVRKLLDAGIKVGLGTDVGGGTSFSMLDTLRQAYKVSRLLG-YELGGHAKLSPAEAFYLATLGGAEALGL 370 (429)
T ss_pred c-----cCCCCHHHHHHCCCeEEEeccCCCCCCccHHHHHHHHHHHHHhhc-cccCCcCCCCHHHHHHHHhhHHHHHcCC
Confidence 2 4556899999999999999998754 5789999988765432110 0012456789999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCC-C-h--------hhh----c----CCeEEEEEECc
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWE-D-F--------AAE----V----SASIEATYVSG 542 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~-~-~--------~~~----~----~~~v~~v~v~G 542 (547)
++++|+|++||+|||+++|.++.. . + .+. . ...|+.|||||
T Consensus 371 ~~~~Gsle~Gk~ADlvvld~~~~~~~~p~~~~~~~~~d~~~~lV~~~~~~~V~~v~V~G 429 (429)
T cd01303 371 DDKIGNFEVGKEFDAVVIDPSATPLLADRMFRVESLEEALFKFLYLGDDRNIREVYVAG 429 (429)
T ss_pred CCCCcCcCCCCccCEEEEcCCCccccccccccccchhhHHHHHeeeCCCCCeeEEEeCC
Confidence 988999999999999999988642 1 1 122 1 66899999998
No 20
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=6.9e-32 Score=283.33 Aligned_cols=374 Identities=20% Similarity=0.206 Sum_probs=230.9
Q ss_pred cEEEEcCEEEeCCC--C-CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 46 DLVVTNGVIFTGDD--S-LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 46 ~~li~n~~v~~~~~--~-~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
.++|+|++|++.++ . ..++++|+|+||||++||+... ++.+++||++|++|+|||||+|+|+.......
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~-----~~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~--- 73 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFD-----GEVDRVIDAGNALVGPGFIDLDALSDLDTTIL--- 73 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCC-----CCCCeEEeCCCCEEecCEEeeecccchhhhhc---
Confidence 57999999976543 2 3467799999999999998532 13468999999999999999999985221000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhh-hhCCCCeEEEEecCCchhhhcHHHHHHcCC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWID-DITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld-~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~ 201 (547)
..++ .+ .++. ...+
T Consensus 74 ------------------------------~~~~-------~~--~~~~~~~~~-------------------------- 88 (488)
T PRK06151 74 ------------------------------GLDN-------GP--GWAKGRVWS-------------------------- 88 (488)
T ss_pred ------------------------------cccc-------ch--hHHhcccCc--------------------------
Confidence 0000 00 0000 0000
Q ss_pred CCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchh
Q 008993 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (547)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 281 (547)
...... ......++++.+...+..+.++.+.|+|++.++....... ...+..
T Consensus 89 -------------------------~~~~~~--~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~-~~~~~~ 140 (488)
T PRK06151 89 -------------------------RDYVEA--GRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQ-WAETYA 140 (488)
T ss_pred -------------------------hhhhhc--chhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccc-cccccc
Confidence 000000 0012467788888888999999999999999875321110 001111
Q ss_pred HHHHHHHHHhhCCCCeeEEEEccCc-----------------------cchhhHHHHHHhcCCCCCCcEEEceEEEEEcC
Q 008993 282 DFADVYQWASYSEKMKIRVCLFFPL-----------------------ETWSSLADLINKTGHVLSDWVYLGGVKAFADG 338 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 338 (547)
...+.++...+. .+|....... +...+..++++.......+++. +. +.-+
T Consensus 141 ~~~~~~~a~~~~---GiR~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~--~~--~~p~ 213 (488)
T PRK06151 141 EFAAAAEAAGRL---GLRVYLGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVR--GM--LAPD 213 (488)
T ss_pred hHHHHHHHHHHc---CCeEEecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceE--EE--EcCC
Confidence 223333333332 2333222100 0012222333332211112221 11 1111
Q ss_pred CcCcchhh-hhc-----------eeEEec-ccHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCCh---------h
Q 008993 339 SLGSNSAL-FHE-----------VAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLAS---------G 392 (547)
Q Consensus 339 ~~~~~~~~-~~~-----------v~~H~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~---------~ 392 (547)
.....+.. +.. +++|+. +..+.+.+.+.+. +.+...+..+.+..++|+.++++ +
T Consensus 214 ~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~ 293 (488)
T PRK06151 214 RIETCTVDLLRRTAAAARELGCPVRLHCAQGVLEVETVRRLHGTTPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGD 293 (488)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCcEEEEECCchHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHH
Confidence 21111111 111 899985 5555555444322 23455677788999999999999 9
Q ss_pred HHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCC
Q 008993 393 TAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGW 472 (547)
Q Consensus 393 ~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~ 472 (547)
+++++++.|+.+++||..+. +++ ...+|++++.++|+++++|||+ ...+++.+++.+.......
T Consensus 294 ~~~~la~~g~~v~~~P~~~~--------~~g-----~~~~p~~~l~~~Gv~v~lGtD~--~~~~~~~~~~~~~~~~~~~- 357 (488)
T PRK06151 294 DLALLAEHGVSIVHCPLVSA--------RHG-----SALNSFDRYREAGINLALGTDT--FPPDMVMNMRVGLILGRVV- 357 (488)
T ss_pred HHHHHHhcCCEEEECchhhh--------hhc-----cccccHHHHHHCCCcEEEECCC--CCccHHHHHHHHHHHHHHh-
Confidence 99999999999999997432 222 4557899999999999999997 3468888888766432100
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC------Chhhhc----CCeEEEEEECc
Q 008993 473 DNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE------DFAAEV----SASIEATYVSG 542 (547)
Q Consensus 473 ~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~------~~~~~~----~~~v~~v~v~G 542 (547)
-.....++++++++++|.|||+++|+++ +|+|++||.|||+|+|.+.++ +..++. ..+|..||++|
T Consensus 358 ---~~~~~~~~~~~al~~aT~~~A~~lg~~~-~G~I~~G~~ADlvvld~~~~~~~~~~d~~~~lv~~~~~~~v~~v~v~G 433 (488)
T PRK06151 358 ---EGDLDAASAADLFDAATLGGARALGRDD-LGRLAPGAKADIVVFDLDGLHMGPVFDPIRTLVTGGSGRDVRAVFVDG 433 (488)
T ss_pred ---cCCCCCCCHHHHHHHHHHHHHHHhCCCC-CcccCCCCcCCEEEEeCCccccCCccCHHHHHHhhCCCCCccEEEECC
Confidence 0012358999999999999999999987 799999999999999987654 122221 35899999999
Q ss_pred EEeCC
Q 008993 543 VQAYP 547 (547)
Q Consensus 543 ~~v~~ 547 (547)
++||.
T Consensus 434 ~~v~~ 438 (488)
T PRK06151 434 RVVME 438 (488)
T ss_pred EEEEE
Confidence 99873
No 21
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=5e-31 Score=272.66 Aligned_cols=178 Identities=18% Similarity=0.214 Sum_probs=131.8
Q ss_pred eeEEec-ccHHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|+. +..++..+...+ .+.+...+.++++..++|+.++++++++++++.|+.+++||.++. +++
T Consensus 205 v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~--------~lg- 275 (424)
T PRK08393 205 ITIHLSETMDEIKQIREKYGKSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNM--------KLG- 275 (424)
T ss_pred EEEEeCCCHHHHHHHHHHhCcCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHH--------hhc-
Confidence 888875 223333333221 123455677888999999999999999999999999999997432 233
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.+.+|++.+.++|+++++|||++.+ +.+++.+++.+........ . ....++++++++++|.|||+.+|++
T Consensus 276 ----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~~---~-~~~~~~~~~al~~aT~~~A~~lg~~ 347 (424)
T PRK08393 276 ----SGVMPLRKLLNAGVNVALGTDGAASNNNLDMLREMKLAALLHKVHN---L-DPTIADAETVFRMATQNGAKALGLK 347 (424)
T ss_pred ----cCCCCHHHHHHCCCcEEEecCCCccCCchhHHHHHHHHHHHHhhcc---C-CCCcCCHHHHHHHHHHHHHHHhCCC
Confidence 4567899999999999999998754 3689999987653321110 1 1234689999999999999999996
Q ss_pred CCcccccCCCcccEEEEcCCCC-----CC-hhhh----cCCeEEEEEECcEEeC
Q 008993 503 NDVGSLSPGKIADFVILSTSSW-----ED-FAAE----VSASIEATYVSGVQAY 546 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~-----~~-~~~~----~~~~v~~v~v~G~~v~ 546 (547)
.|+|++||+|||+++|.+.. .+ ...+ ...+|..|||+|+++|
T Consensus 348 --~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 399 (424)
T PRK08393 348 --AGVIKEGYLADIAVIDFNRPHLRPINNPISHLVYSANGNDVETTIVDGKIVM 399 (424)
T ss_pred --CCccCCCCccCEEEEeCCCCCcCCCCChHHHeeeeCCCCCeeEEEECCEEEE
Confidence 59999999999999998732 11 1121 1458999999999986
No 22
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-31 Score=270.32 Aligned_cols=359 Identities=26% Similarity=0.304 Sum_probs=213.2
Q ss_pred ccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccc-
Q 008993 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK- 123 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~- 123 (547)
..+++.+++.+++.+.. +++.|+|+||||+.||+.. ... |++.++||++|++|+|||||+|+|+...+.......
T Consensus 10 ~~~~~~~~~~~~~~~~i-~~~~v~i~~GkI~~vg~~~-~~~--~~~~~viD~~G~~V~PGLID~HtHl~~~~~~~~~~~~ 85 (406)
T COG1228 10 AMLATLAGRGLPGLGII-EDGAVLIEDGKIVAVGPEE-IDI--PAGAEVIDAKGKTVTPGLIDAHTHLGFGGSRGGEFEL 85 (406)
T ss_pred hhheeeccccCCCccee-ecceEEEECCEEEEecCcc-cCC--CCCCeEEeCCCCEEccceeeccccccccCCccchhhh
Confidence 45678889998874444 4589999999999999874 111 577899999999999999999999998664321111
Q ss_pred -------------cCCCCCHHHHHH-------------HHHHHHHc-CCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCC
Q 008993 124 -------------LRGVSHKDEFVR-------------RVKEAVKN-SKKGSWILGGGWNNDLWGGDLPMASWIDDITPH 176 (547)
Q Consensus 124 -------------~~g~~t~~~~~~-------------~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~ 176 (547)
..|+.+....+. +++..... ......+.|++.+...-++....... ....
T Consensus 86 ~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~---~~~~ 162 (406)
T COG1228 86 REAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAG---LKES 162 (406)
T ss_pred cccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhh---cccc
Confidence 122222222111 12211211 12445555555543332111100000 0000
Q ss_pred CeEEEEecCCchhhhcHHHHHHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHH
Q 008993 177 NPVWLSRMDGHMGLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLA 256 (547)
Q Consensus 177 ~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (547)
.|..+ + +.+. .+++ . +...+.+.+...+.+...+...
T Consensus 163 ~~~~~------------------~-----~t~~------~~~~-------------~-~~~~~~~r~~~~~g~~~~i~~~ 199 (406)
T COG1228 163 RPVAV------------------G-----STPL------AAHG-------------V-PEERKATREAYVAGARLLIKIV 199 (406)
T ss_pred ccccc------------------c-----Cccc------cccC-------------C-cccccchHHHHHHHHHHHHHHH
Confidence 00000 0 0000 0000 0 0001122233334443335555
Q ss_pred HhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEE
Q 008993 257 LSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFA 336 (547)
Q Consensus 257 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (547)
...|+....+.- ......+.++..+++..+.+. +++
T Consensus 200 a~~~l~~~~d~~----~~~~~fs~~e~~~~l~~a~~~-g~~--------------------------------------- 235 (406)
T COG1228 200 ATGGLASFVDAF----CEGGQFSPEEIRAVLAAALKA-GIP--------------------------------------- 235 (406)
T ss_pred Hhccccchhhcc----ccccccCHHHHHHHHHHHHHC-CCc---------------------------------------
Confidence 565665555421 111222444555555555443 222
Q ss_pred cCCcCcchhhhhceeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHh--CCcE-EEecCccccC
Q 008993 337 DGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD--QGIV-ASMQPQHLLD 413 (547)
Q Consensus 337 d~~~~~~~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~--~g~~-~~~~p~~~~~ 413 (547)
+.+|+.+...+..+++.. ...++|..+++++..+.|++ .|.. +.+.|....
T Consensus 236 -------------v~~HA~~~~g~~~A~~~g------------~~s~~H~~~ld~~~~~~~a~~~~g~~~~~l~p~~~~- 289 (406)
T COG1228 236 -------------VKAHAHGADGIKLAIRLG------------AKSAEHGTLLDHETAALLAEKGAGTPVPVLLPRTKF- 289 (406)
T ss_pred -------------eEEEecccchHHHHHHhC------------cceehhhhhcCHhHHHHHhhccCCCccccccchhhh-
Confidence 555655444444433322 55899999999999999999 7763 344444211
Q ss_pred ChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC--CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 414 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 414 ~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
.+.. ....+++.|+++|+++++|||++.++ .+....+..++ ..++|++|||+++
T Consensus 290 -------~l~e----~~~~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~-------------~~gmtp~EaL~a~ 345 (406)
T COG1228 290 -------ELRE----LDYKPARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAV-------------RLGMTPEEALKAA 345 (406)
T ss_pred -------hhhc----ccchhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHH-------------HcCCCHHHHHHHH
Confidence 1111 33356899999999999999998776 33444444433 3359999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCCCh-hhhcCCeEEEEEECcEEeCC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF-AAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~-~~~~~~~v~~v~v~G~~v~~ 547 (547)
|.|||++||++++.|||++||.|||+||++||+.++ ......++..||++|+++|+
T Consensus 346 T~naA~alG~~~~~Gsle~Gk~ADlvv~~~dp~~~i~y~~~~~~v~~v~k~G~~~~~ 402 (406)
T COG1228 346 TINAAKALGLADKVGSLEPGKDADLVVWDGDPLADIPYFLGLNKVEAVIKDGKVVYE 402 (406)
T ss_pred HHHHHHHcCCccccccccCCCccCEEEEcCCChhhccccccCCceEEEEECCEEeec
Confidence 999999999999999999999999999999997752 11224599999999999984
No 23
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=9.2e-32 Score=277.82 Aligned_cols=156 Identities=24% Similarity=0.145 Sum_probs=115.7
Q ss_pred cCCCCCCceEeecCCCCh-------hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeee
Q 008993 374 TGKRDQRFRIEHAQHLAS-------GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLAL 446 (547)
Q Consensus 374 ~~~~~~~~~i~H~~~~~~-------~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~ 446 (547)
.+.. .+..++|+.++++ +.++++++.|+.+++||.++...... ....+ .. ...+++++|.++|+++++
T Consensus 230 ~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~-~~~~~--~~-~~~~~~~~~~~~Gv~v~l 304 (398)
T cd01293 230 RGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGR-EDTTP--KR-RGVTPVKELRAAGVNVAL 304 (398)
T ss_pred hCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhccc-ccCCC--CC-CCCCcHHHHHHCCCeEEE
Confidence 3444 5789999998863 45899999999999999876422111 00010 11 456789999999999999
Q ss_pred cCCCC------CCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEc
Q 008993 447 GSDWP------VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILS 520 (547)
Q Consensus 447 GTD~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d 520 (547)
|||++ ....+++..+..+..+... ....+.+++|+++|.|+|+++|+ +.|+|+|||.|||+++|
T Consensus 305 GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~al~~aT~~~A~~lg~--~~G~l~~Gk~ADlv~~d 374 (398)
T cd01293 305 GSDNVRDPWYPFGSGDMLEVANLAAHIAQL--------GTPEDLALALDLITGNAARALGL--EDYGIKVGCPADLVLLD 374 (398)
T ss_pred CCCCCCCCCcCCCCCCHHHHHHHHHHHHcC--------CChhhHHHHHHhcChhhhhhcCC--cCcccccCCcceEEEEC
Confidence 99973 2235788888875543210 01134589999999999999999 37999999999999999
Q ss_pred CCCCCChhhhcCCeEEEEEECcEEe
Q 008993 521 TSSWEDFAAEVSASIEATYVSGVQA 545 (547)
Q Consensus 521 ~d~~~~~~~~~~~~v~~v~v~G~~v 545 (547)
.|++.++... ..++..||++|+++
T Consensus 375 ~~~~~~~~~~-~~~~~~v~~~G~~~ 398 (398)
T cd01293 375 AEDVAEAVAR-QPPRRVVIRKGRVV 398 (398)
T ss_pred CCCHHHHHhc-CCCccEEEECCEEC
Confidence 9987754333 34899999999974
No 24
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=5.2e-31 Score=271.43 Aligned_cols=173 Identities=26% Similarity=0.364 Sum_probs=134.8
Q ss_pred eeEEec-ccHHHHHHHHHH------HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhh
Q 008993 350 VAIHAI-GDRANDLVLDMY------KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKL 422 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 422 (547)
+++|+. .....+.+.+.+ -+.+.+.|.++.+..++|+.++++++++++++.|+.+.+||.++. ++
T Consensus 203 v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~--------~~ 274 (401)
T TIGR02967 203 VQTHLSENKDEIAWVKELFPEAKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNL--------FL 274 (401)
T ss_pred eEEEECCCchHHHHHHHHcCCCCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHH--------Hh
Confidence 888876 444455554432 234556677888999999999999999999999999999998643 12
Q ss_pred ChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 423 GVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 423 g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+ .+.++++.++++|+++++|||++. ...+++..++.+...... ...+++++++|+|+|.|||+.+|+
T Consensus 275 ~-----~g~~~~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~aT~~~A~~lg~ 342 (401)
T TIGR02967 275 G-----SGLFNLKKALEHGVRVGLGTDVGGGTSFSMLQTLREAYKVSQL-------QGARLSPFEAFYLATLGGARALDL 342 (401)
T ss_pred c-----cCCCCHHHHHHCCCeEEEecCCCCCCCcCHHHHHHHHHHHhhh-------cCCCCCHHHHHHHHHHHHHHHhCC
Confidence 2 455689999999999999999865 346899988877654321 135689999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCC--------------Chhhhc----CCeEEEEEECc
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWE--------------DFAAEV----SASIEATYVSG 542 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~--------------~~~~~~----~~~v~~v~v~G 542 (547)
++++|+|++||.|||+++|.+... +...+. ..+|..|||+|
T Consensus 343 ~~~~G~i~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~v~G 401 (401)
T TIGR02967 343 DDRIGNFEPGKEADFVVLDPAATPLLALRFEGADTLEDKLFKLMYLGDDRNVAETYVAG 401 (401)
T ss_pred cCCccccCCCCccCEEEEcCCCCcccccccccccchhhHHHHheeecCccceeEEEeCC
Confidence 988999999999999999976322 122222 56899999998
No 25
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=99.98 E-value=1.5e-30 Score=271.38 Aligned_cols=182 Identities=23% Similarity=0.224 Sum_probs=136.0
Q ss_pred eeEEecc-cHHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAIG-DRANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|+.. ......+.+.+ -+.+.+.+..+++..++||.++++++++++++.|+.+++||.++. +++
T Consensus 231 i~~H~~e~~~e~~~~~~~~g~~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~--------~lg- 301 (456)
T PRK09229 231 VHIHIAEQTKEVDDCLAWSGARPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEA--------NLG- 301 (456)
T ss_pred eEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhh--------hhc-
Confidence 8888853 33333333322 123445678889999999999999999999999999999998643 233
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCC--CCCCCC-CCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPP--GWDNAW-IPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
.+.+|+++|+++|+++++|||++. +.+++..++.+...... .....+ ..++.++++++|+|+|.|+|+++|+
T Consensus 302 ----~g~~p~~~l~~~Gv~v~lGtD~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~ 376 (456)
T PRK09229 302 ----DGIFPAVDYLAAGGRFGIGSDSHV-SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR 376 (456)
T ss_pred ----CCCCCHHHHHHCCCeEEEecCCCC-CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC
Confidence 556789999999999999999754 46888888877643211 101111 1225789999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCC--C--hhhh--------cCCeEEEEEECcEEeCC
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWE--D--FAAE--------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~--~--~~~~--------~~~~v~~v~v~G~~v~~ 547 (547)
+ +|+|+|||+|||+++|.+.+. + ..++ ...+|..|||+|++||.
T Consensus 377 -~-~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~ 432 (456)
T PRK09229 377 -A-IGGLAVGARADLVVLDLDHPALAGREGDALLDRWVFAGGDAAVRDVWVAGRWVVR 432 (456)
T ss_pred -C-cCCcCCCCccCEEEEeCCCccccCCChhhHHHHHhhcCCCCCeeEEEECCEEEEE
Confidence 4 899999999999999987532 1 1222 14689999999999873
No 26
>PRK07572 cytosine deaminase; Validated
Probab=99.98 E-value=1.2e-30 Score=269.83 Aligned_cols=373 Identities=20% Similarity=0.225 Sum_probs=223.6
Q ss_pred ccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
++++|+|++|+++.. ..+|+|+||+|.+|++..+ +...++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~~i~~~~i~~~~~----~~~i~i~~g~I~~v~~~~~-----~~~~~~id~~g~~~~PG~id~h~h~~~~~~------- 65 (426)
T PRK07572 2 FDLIVRNANLPDGRT----GIDIGIAGGRIAAVEPGLQ-----AEAAEEIDAAGRLVSPPFVDPHFHMDATLS------- 65 (426)
T ss_pred CcEEEECeEECCCCe----eEEEEEECCEEEEecCCCC-----CCcCceEeCCCCEEcccceehhhCcchhhc-------
Confidence 467899999999752 4589999999999998542 135589999999999999999999853210
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
.|. + ...
T Consensus 66 --------------------------~~~-----------~------~~~------------------------------ 72 (426)
T PRK07572 66 --------------------------YGL-----------P------RVN------------------------------ 72 (426)
T ss_pred --------------------------cCC-----------C------CCC------------------------------
Confidence 000 0 000
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
. .|.+.+ .+..+....+..+.++.+......++.+.+.|+|++.++...... ....+....
T Consensus 73 ------------~----~g~l~e-~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~--~~~~~~a~~ 133 (426)
T PRK07572 73 ------------A----SGTLLE-GIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDP--RLLAVEALL 133 (426)
T ss_pred ------------C----CCCHHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCC--cccHHHHHH
Confidence 0 011111 112222223456788999999999999999999999997532100 001111111
Q ss_pred HHHHHHhhCCCCeeEEEEccCccc--hhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcC----cchhhhhc-------ee
Q 008993 285 DVYQWASYSEKMKIRVCLFFPLET--WSSLADLINKTGHVLSDWVYLGGVKAFADGSLG----SNSALFHE-------VA 351 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~-------v~ 351 (547)
+ +++... ..+.+.......... .+...+.+++.-+...+.+ +|.. ..+.... .....+.. ++
T Consensus 134 ~-~~~~~~-~~~~~~~~a~~~~g~~~~~~~~~~~~~~l~~g~d~i--Gg~p-~~~~~~~~~~e~l~~~~~~A~~~g~~v~ 208 (426)
T PRK07572 134 E-VRERVA-PYLDLQLVAFPQDGVLRSPGAVDNLERALDMGVDVV--GGIP-HFERTMADGAESVRLLCEIAAERGLRVD 208 (426)
T ss_pred H-HHHHhh-ccceEEEEeccChhhccCccHHHHHHHHHHcCCCEE--eCCC-CCccccchHHHHHHHHHHHHHHcCCCeE
Confidence 1 111111 111211211111100 0111112211111111222 2221 1111111 11111111 88
Q ss_pred EEec-ccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCh-------hHHHHHHhCCcEEEecCccccCChhHHHHhhC
Q 008993 352 IHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARFGDQGIVASMQPQHLLDDADSARKKLG 423 (547)
Q Consensus 352 ~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-------~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g 423 (547)
+|+. +.......++.+.+...+.|..+ +..++|+..++. ++++.|++.|+.+++||.++...... .-+
T Consensus 209 ~H~~e~~~~~~~~~~~~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~---~~~ 284 (426)
T PRK07572 209 MHCDESDDPLSRHIETLAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGR---HDT 284 (426)
T ss_pred EEECCCCChhHHHHHHHHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCC---CCC
Confidence 8874 45555555555555556667666 789999987765 56999999999999999765421100 000
Q ss_pred hhhhhhhchHHHHHHHCCCeeeecCCCC------CCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 424 VDRAERESYLFQSLLANNALLALGSDWP------VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 424 ~~~~~~~~~~~~~l~~~Gv~~~~GTD~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
... +++..++++|+++||++++|||++ ..+.++++.++.+..... +.. .-.+.++++++|.|||+
T Consensus 285 ~~~-~~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~------~~~--~~~l~~~l~~aT~~~A~ 355 (426)
T PRK07572 285 YPK-RRGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQ------MTG--QDAMRACFDAVTVNPAR 355 (426)
T ss_pred CCC-CCCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHc------CCC--HHHHHHHHHHhhcchHH
Confidence 001 145668999999999999999974 234578877766443211 000 11346788899999999
Q ss_pred HcccCCCcccccCCCcccEEEEc-CCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 498 ACFLENDVGSLSPGKIADFVILS-TSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 498 ~lgl~~~~GsI~~Gk~ADlvv~d-~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+||+++ .| |++||.|||++++ .+|++.+.... ++..||++|++||.
T Consensus 356 ~lgl~~-~g-i~~G~~ADlvl~d~~~p~e~i~~~~--~~~~V~~~G~~v~~ 402 (426)
T PRK07572 356 IMGLEG-YG-LEPGCNADLVLLQARDPIEAIRLRA--ARLAVIRRGKVIAR 402 (426)
T ss_pred hhCCCC-cC-CCCCCcCCEEEEeCCCHHHHHHhcC--CceEEEECCEEEec
Confidence 999988 67 9999999999999 58877655544 78999999999874
No 27
>PRK08418 chlorohydrolase; Provisional
Probab=99.98 E-value=2e-29 Score=258.18 Aligned_cols=146 Identities=13% Similarity=0.096 Sum_probs=116.3
Q ss_pred CCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CC
Q 008993 378 DQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DI 455 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~ 455 (547)
..+..+.||.++++++++++++.|+.+++||.++. ++| .+.+|+++|+++|+++++|||+..+ +.
T Consensus 253 ~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~--------~lg-----~g~~p~~~~~~~Gi~v~lGtD~~~~~~~~ 319 (408)
T PRK08418 253 GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNR--------LLS-----NKALDLEKAKKAGINYSIATDGLSSNISL 319 (408)
T ss_pred CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHH--------Hhc-----CCCccHHHHHhCCCeEEEeCCCCCCCCCc
Confidence 45889999999999999999999999999998553 333 4456899999999999999997654 47
Q ss_pred ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCC-CCChhh----h
Q 008993 456 NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS-WEDFAA----E 530 (547)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~-~~~~~~----~ 530 (547)
+++.+++.+...... .....+++++|+|+|.|+|++||++ .|+|++||+|||+++|.+. ..++.. .
T Consensus 320 ~~~~em~~~~~~~~~-------~~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~ADlv~~d~~~~~~~~~~~~~~~ 390 (408)
T PRK08418 320 SLLDELRAALLTHAN-------MPLLELAKILLLSATRYGAKALGLN--NGEIKEGKDADLSVFELPEECTKKEQLPLQF 390 (408)
T ss_pred CHHHHHHHHHHHhcc-------CCccccHHHHHHHHHHHHHHHhCCC--CccccCCCccCEEEEeCCCCCCChhHhHHHH
Confidence 899999987654320 0112347899999999999999996 6999999999999999862 212111 1
Q ss_pred --cCCeEEEEEECcEEe
Q 008993 531 --VSASIEATYVSGVQA 545 (547)
Q Consensus 531 --~~~~v~~v~v~G~~v 545 (547)
....|..|||+|++|
T Consensus 391 ~~~~~~v~~v~v~G~~v 407 (408)
T PRK08418 391 ILHAKEVKKLFIGGKEV 407 (408)
T ss_pred HhccCccceEEECCEEc
Confidence 255899999999987
No 28
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.97 E-value=6.6e-30 Score=263.34 Aligned_cols=178 Identities=25% Similarity=0.273 Sum_probs=131.1
Q ss_pred eeEEeccc-HHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|.... ..+..+.+.+ -+.+.+.+..+++..++||.++++++++++++.|+.+++||.++.. ++
T Consensus 222 i~~H~~e~~~e~~~~~~~~g~~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~--------lg- 292 (418)
T cd01313 222 VHIHLAEQPKEVDDCLAAHGRRPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEAN--------LG- 292 (418)
T ss_pred eEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhh--------cc-
Confidence 88887522 2232222221 1244556788899999999999999999999999999999997642 22
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPP--GWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.+.+|+++|+++|+++++|||++. +.+++..++.+....+. .....+.....++++++|+++|.|+|+++|++
T Consensus 293 ----~g~~p~~~l~~~Gv~v~lGtD~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~ 367 (418)
T cd01313 293 ----DGIFPAAALLAAGGRIGIGSDSNA-RIDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA 367 (418)
T ss_pred ----CCCCCHHHHHHCCCcEEEecCCCC-CcCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC
Confidence 456789999999999999999754 35888888776542110 00011223557999999999999999999997
Q ss_pred CCcccccCCCcccEEEEcCCCCC--C------hhhhc----CCeEEEEEECcE
Q 008993 503 NDVGSLSPGKIADFVILSTSSWE--D------FAAEV----SASIEATYVSGV 543 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~~--~------~~~~~----~~~v~~v~v~G~ 543 (547)
+|+|++||.|||+++|.+... + +..+. ..+|+.|||+|+
T Consensus 368 --~Gsle~Gk~ADlvvld~~~~~~~p~~~~~~~~~lv~~~~~~~V~~v~V~G~ 418 (418)
T cd01313 368 --TGALEAGARADLLSLDLDHPSLAGALPDTLLDAWVFAAGDREVRDVVVGGR 418 (418)
T ss_pred --CCeECCCCccCEEEEcCCCccccCCCchhHHHHHeecCCCCceeEEEeCCC
Confidence 899999999999999977322 2 22222 558999999996
No 29
>PRK14085 imidazolonepropionase; Provisional
Probab=99.97 E-value=1.4e-29 Score=258.52 Aligned_cols=336 Identities=22% Similarity=0.274 Sum_probs=199.4
Q ss_pred ccEEEEc-CEEEeCCCC-------CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccc
Q 008993 45 ADLVVTN-GVIFTGDDS-------LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (547)
Q Consensus 45 ~~~li~n-~~v~~~~~~-------~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 116 (547)
++++|+| +.|++++.. ..++++|+|+||||++|++..+. +.++++||++|++|+|||||+|+|+....
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~----~~~~~~iD~~g~~v~PGlId~H~Hl~~~~ 76 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADA----PAADERVDAGGRAVLPGFVDSHSHLVFAG 76 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccC----CCCCeEEeCCCCEEecCeEecCcCccccC
Confidence 3678999 599998643 34677999999999999986432 34678999999999999999999995331
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHH
Q 008993 117 LQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVAL 196 (547)
Q Consensus 117 ~~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l 196 (547)
... .++... ..+..|
T Consensus 77 ~r~-----------~~~~~~-------------~~~~~~----------------------------------------- 91 (382)
T PRK14085 77 DRS-----------AEFAAR-------------MAGEPY----------------------------------------- 91 (382)
T ss_pred Chh-----------HHHHhh-------------hcCCCc-----------------------------------------
Confidence 100 000000 000000
Q ss_pred HHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCccc
Q 008993 197 QLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESV 276 (547)
Q Consensus 197 ~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 276 (547)
+. +.+.. ........+.++........+..+.+.|+|++.+++.+. ..
T Consensus 92 -----------~~-------------~~i~~-----~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~--~~- 139 (382)
T PRK14085 92 -----------SA-------------GGIRT-----TVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYG--LT- 139 (382)
T ss_pred -----------cC-------------CChHH-----HHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCC--CC-
Confidence 00 00000 001123467788888899999999999999999875331 11
Q ss_pred ccchhHHHHHHHHHhhC--CCCeeEEEEccCc--cchhhHHHHHH----hcCCCCCCcEEEceEEEEEcCCcCc---chh
Q 008993 277 QLSWEDFADVYQWASYS--EKMKIRVCLFFPL--ETWSSLADLIN----KTGHVLSDWVYLGGVKAFADGSLGS---NSA 345 (547)
Q Consensus 277 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~---~~~ 345 (547)
..+..+..+..... .......+...+. ...+...+... ...... ...++.++++.... ...
T Consensus 140 ---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~idi~~~~~~~~~~~l~~ 211 (382)
T PRK14085 140 ---VEDEARSARIAAEFTDEVTFLGAHVVPPEYAGDADEYVDLVCGPMLDAVAPH-----ARWIDVFCERGAFDEDQSRR 211 (382)
T ss_pred ---HHHHHHHHHHHHHhhhcceeeccccCCcccCCCHHHHHHHHHHHHHHHHHHh-----CCeEEEEecCCCCCHHHHHH
Confidence 12222222211110 0000111111111 01111111110 000001 12245555543111 111
Q ss_pred hhhc-------eeEEecccH---HHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCCh
Q 008993 346 LFHE-------VAIHAIGDR---ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDA 415 (547)
Q Consensus 346 ~~~~-------v~~H~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~ 415 (547)
.... +.+|+.+.. .++.+.+ .+ ...++|+.++++++++++++.|+.+++||.++...
T Consensus 212 ~~~~a~~~g~~v~~H~~~~~~~~~v~~~~~--------~g----~~~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~- 278 (382)
T PRK14085 212 VLTAGRAAGLGLRVHGNQLGPGPGVRLAVE--------LG----AASVDHCTYLTDADVDALAGSGTVATLLPGAEFST- 278 (382)
T ss_pred HHHHHHHcCCCeEEEeCcccCChHHHHHHH--------cC----CCcHHHhCCCCHHHHHHHHHcCCEEEECcHHHHhc-
Confidence 1111 788876421 2322221 12 34689999999999999999999999999864310
Q ss_pred hHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 416 DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 416 ~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
+...++++.++++|+++++|||++... .....+...+... ....+++++++++++|.||
T Consensus 279 ------------~~~~~~~~~l~~aGv~v~lgsD~~~~~-~~~~~~~~~~~~~--------~~~~~l~~~~al~~aT~~~ 337 (382)
T PRK14085 279 ------------RQPYPDARRLLDAGVTVALASDCNPGS-SYTSSMPFCVALA--------VRQMGMTPAEAVWAATAGG 337 (382)
T ss_pred ------------CCCCchHHHHHHCCCcEEEEeCCCCCC-ChHHHHHHHHHHH--------HHhcCCCHHHHHHHHHHHH
Confidence 134578999999999999999975321 1112222221111 1345789999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCCC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSSW 524 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~ 524 (547)
|+++|+++ +|+|++||.|||++++.+..
T Consensus 338 A~~lg~~~-~G~l~~G~~ADlvv~d~~~~ 365 (382)
T PRK14085 338 ARALRRDD-VGVLAVGARADLHVLDAPSH 365 (382)
T ss_pred HHHcCCCC-CCCcCCCCCCCEEEEcCCCC
Confidence 99999985 89999999999999998763
No 30
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.97 E-value=4.3e-30 Score=262.77 Aligned_cols=269 Identities=19% Similarity=0.174 Sum_probs=166.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEc----cCcc---chh
Q 008993 238 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLF----FPLE---TWS 310 (547)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~ 310 (547)
...++++.+......+..+.+.|+|++.....+ +...+. .....+..+++..+.++.+..... ++.+ ...
T Consensus 86 ~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~--g~~~~~-~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T TIGR01224 86 RAASEEELLKLALFRLKSMLRSGTTTAEVKSGY--GLDLET-ELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRPD 162 (377)
T ss_pred HhCCHHHHHHHHHHHHHHHHHCCceEEEecccC--CCCHHH-HHHHHHHHHHHHhhCCCceEeeeeecccCCccccCCHH
Confidence 346778889999999999999999999432211 111111 123445555554444343332211 1111 111
Q ss_pred ----hHHH-HHHhcCCCCCCcEEEceEEEEEcCCcCcchh---hhhc-------eeEEecccHHHHHHHHHHHHHHHhcC
Q 008993 311 ----SLAD-LINKTGHVLSDWVYLGGVKAFADGSLGSNSA---LFHE-------VAIHAIGDRANDLVLDMYKSVVVTTG 375 (547)
Q Consensus 311 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~ 375 (547)
+..+ .++..... . ...+++.+.......... .+.. +++|+.+...... ++.... .+
T Consensus 163 ~~~~~~~~~~~~~~~~~--~--~v~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~~----~~~~~~-~g 233 (377)
T TIGR01224 163 DYVDGICEELIPQVAEE--G--LASFADVFCEAGVFSVEQSRRILQAAQEAGLPVKLHAEELSNLGG----AELAAK-LG 233 (377)
T ss_pred HHHHHHHHHHHHHHHHh--C--CCCeeEEEecCCCcCHHHHHHHHHHHHHCCCCEEEEecCCCCCCH----HHHHHH-cC
Confidence 1111 11111110 0 123444444332221111 1101 7888864322111 111111 22
Q ss_pred CCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC
Q 008993 376 KRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI 455 (547)
Q Consensus 376 ~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~ 455 (547)
...+.|+.++++++++++++.|+.+.+||.++.. ++ ...+|++.+.++|+++++|||+.. +.
T Consensus 234 ----~~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~--------l~-----~~~~p~~~l~~~Gv~v~lgTD~~~-~~ 295 (377)
T TIGR01224 234 ----AVSADHLEHASDAGIKALAEAGTVAVLLPGTTFY--------LR-----ETYPPARQLIDYGVPVALATDLNP-GS 295 (377)
T ss_pred ----CCccHHHhcCCHHHHHHHHhcCCEEEECchHHHh--------cC-----CcCccHHHHHHCCCCEEEECCCCC-CC
Confidence 4468899999999999999999999999996542 12 345689999999999999999632 24
Q ss_pred ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCe
Q 008993 456 NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSAS 534 (547)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~ 534 (547)
+++..+...+.... ...+++++++++++|.|||+++|+++++|+|++||.|||+++|.+++. .+......+
T Consensus 296 ~~~~~~~~~~~~~~--------~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~ 367 (377)
T TIGR01224 296 SPTLSMQLIMSLAC--------RLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAEIPYHYGVNH 367 (377)
T ss_pred ChhHHHHHHHHHHH--------HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHHhhhhcCCCC
Confidence 45555554443211 235689999999999999999999988999999999999999999876 333334569
Q ss_pred EEEEEECcEE
Q 008993 535 IEATYVSGVQ 544 (547)
Q Consensus 535 v~~v~v~G~~ 544 (547)
|..||++|++
T Consensus 368 v~~v~v~G~~ 377 (377)
T TIGR01224 368 VHAVIKNGNI 377 (377)
T ss_pred ceEEEECCCC
Confidence 9999999984
No 31
>PRK09230 cytosine deaminase; Provisional
Probab=99.97 E-value=7.1e-30 Score=262.78 Aligned_cols=375 Identities=15% Similarity=0.197 Sum_probs=223.9
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
....++|+|++|+++.. ..+|+|+||+|.+|++..... ....++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~~~li~~~~~~~~~~----~~~i~i~~g~I~~i~~~~~~~---~~~~~~id~~g~~v~PGlid~H~H~~~~~~----- 69 (426)
T PRK09230 2 NNALMTIKNARLPGKEG----LWQITIEDGKISAIEPQSEAS---LEAGEVLDAEGGLAIPPFIEPHIHLDTTQT----- 69 (426)
T ss_pred CCceEEEECcEEcCCCe----eEEEEEECCEEEEecCCCCCC---CCCCceEeCCCCEeccceeEEEEcccccee-----
Confidence 34578999999998642 248999999999999864311 135689999999999999999999864311
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeC-CCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGG-WNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~ 201 (547)
.+.. |.. ..+...++
T Consensus 70 ----------------------------~~~~~~~~-----~~~l~~~i------------------------------- 85 (426)
T PRK09230 70 ----------------------------AGEPNWNQ-----SGTLFEGI------------------------------- 85 (426)
T ss_pred ----------------------------cCCCccCC-----CCCHHHHH-------------------------------
Confidence 0000 000 00000000
Q ss_pred CCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchh
Q 008993 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (547)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 281 (547)
..........+.++.+......+.++.+.|+|++.++-... ......++
T Consensus 86 -----------------------------~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~--~~~~~~~~ 134 (426)
T PRK09230 86 -----------------------------ERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVS--DPTLTALK 134 (426)
T ss_pred -----------------------------HHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccC--CcchhHHH
Confidence 00011113356788889999999999999999998875321 11111223
Q ss_pred HHHHHHHHHhhCCCCeeEEEEcc---CccchhhHHHHHHhcCCCCCCcEEEceEEEEE-c--CCcCcchhhhh---c---
Q 008993 282 DFADVYQWASYSEKMKIRVCLFF---PLETWSSLADLINKTGHVLSDWVYLGGVKAFA-D--GSLGSNSALFH---E--- 349 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d--~~~~~~~~~~~---~--- 349 (547)
...+..+++....++.++..... ..+...+..+...+.. .+. .++..... + .+.......+. +
T Consensus 135 a~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~~~l~~a~~~~---~~~--vg~~p~~~~~~~~~~e~l~~~~~~A~~~g~ 209 (426)
T PRK09230 135 AMLEVKEEVAPWVDLQIVAFPQEGILSYPNGEALLEEALRLG---ADV--VGAIPHFEFTREYGVESLHKAFALAQKYDR 209 (426)
T ss_pred HHHHHHHHhhCcceEEEEeccCccccCCccHHHHHHHHHHcC---CCE--EeCCCCccccchhHHHHHHHHHHHHHHhCC
Confidence 33444444544444444443221 1112222222222211 111 11111000 0 00001111111 0
Q ss_pred -eeEEecc-cHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-------ChhHHHHHHhCCcEEEecCccccCChhHHHH
Q 008993 350 -VAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL-------ASGTAARFGDQGIVASMQPQHLLDDADSARK 420 (547)
Q Consensus 350 -v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~-------~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~ 420 (547)
+++|... ............+.....+ .+.+..+.||.++ ++++++++++.|+.+.+||.++.....
T Consensus 210 ~~~~H~~E~~~~~~~~~~~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~---- 284 (426)
T PRK09230 210 LIDVHCDEIDDEQSRFVETVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQG---- 284 (426)
T ss_pred CcEEEECCCCCcchHHHHHHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcC----
Confidence 7777642 2222222222334444455 5778999999999 578899999999999999997652211
Q ss_pred hhChhhhhhhchHHHHHHHCCCeeeecCCCCCC------CCChHHHHHHHHcccCCCCCCCCCCCCCC-CHHHHHHHHHH
Q 008993 421 KLGVDRAERESYLFQSLLANNALLALGSDWPVA------DINPLCAIRTAMKRIPPGWDNAWIPSERI-SLTDALIAHTL 493 (547)
Q Consensus 421 ~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~al~~aT~ 493 (547)
+......+++..|+++|.++|+++++|||+... ..+++..+........ .... +++++|+|+|.
T Consensus 285 ~~~~~p~~~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~---------~~~~~~~~~~l~maT~ 355 (426)
T PRK09230 285 RFDTYPKRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQ---------LMGYGQINDGLNLITT 355 (426)
T ss_pred CCCCCCCCCCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHh---------hCChhhHHHHHHHHhc
Confidence 000001125567899999999999999997532 3567777665432211 0001 36899999999
Q ss_pred HHHHHcccCCCcccccCCCcccEEEEcC-CCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 494 SAARACFLENDVGSLSPGKIADFVILST-SSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 494 n~A~~lgl~~~~GsI~~Gk~ADlvv~d~-d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|||++||+++ .| |++||.|||++++. ++.+.+.. ...++.|+++|++|+.
T Consensus 356 ~gA~alg~~~-~g-le~G~~ADlv~~~~~~~~~~~~~--~~~~~~v~~~G~~v~~ 406 (426)
T PRK09230 356 HSARTLNLQD-YG-IEVGNPANLIILPAENGFDAVRR--QVPVRYSIRHGKVIAE 406 (426)
T ss_pred chhHHhCCCC-cC-CCCCCcCCEEEEeCCCHHHHHhc--cCCceEEEECCEEEec
Confidence 9999999987 78 99999999999996 44332222 3478999999999974
No 32
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=99.97 E-value=1.2e-29 Score=263.85 Aligned_cols=182 Identities=23% Similarity=0.225 Sum_probs=133.8
Q ss_pred eeEEec-ccHHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|.. +..+...+.+.+ -+.+...+..+++..+.||.++++++++++++.|+.+++||.++. +++
T Consensus 231 v~~H~~e~~~e~~~~~~~~G~~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~--------~lg- 301 (455)
T TIGR02022 231 VHIHVAEQQKEVDDCLAWSGRRPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEA--------NLG- 301 (455)
T ss_pred eEEEECCChHHHHHHHHHhCCCHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhc--------ccc-
Confidence 888875 333333333322 134556688899999999999999999999999999999999654 222
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCC--CCCCCC-CCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPP--GWDNAW-IPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
.+.+|+++|+++|+++++|||+.. +.+++.+++.+....+. .....+ .....++++++|+|+|.|+|++||+
T Consensus 302 ----~g~~pi~~l~~~Gv~v~lGTD~~~-~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~ 376 (455)
T TIGR02022 302 ----DGIFPAVDFVAAGGRFGIGSDSHV-VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL 376 (455)
T ss_pred ----CCCCCHHHHHHCCCeEEEECCCCC-CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC
Confidence 455789999999999999999643 46889998887543211 000001 1123577899999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCC-CCC-Ch--hh----h----cCCeEEEEEECcEEeCC
Q 008993 502 ENDVGSLSPGKIADFVILSTS-SWE-DF--AA----E----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d-~~~-~~--~~----~----~~~~v~~v~v~G~~v~~ 547 (547)
+ +|+|++||+|||+++|.+ |.. +. .+ + ...+|..|||+|++|++
T Consensus 377 -~-~GsLe~Gk~ADlvvld~~~~~~~~~~~~~~~~~lv~~~~~~~V~~v~V~G~~v~~ 432 (455)
T TIGR02022 377 -A-TGGLRAGARADFLTLDGDHPYLAGALGDSLLDRWLFAGGGAAVRDVWVGGRWVVR 432 (455)
T ss_pred -C-CCccCCCCCcCEEEEeCCCcccCCCCchhHHHHHhhcCCCCCccEEEECCEEEEE
Confidence 3 899999999999999976 322 21 12 1 14689999999999863
No 33
>PRK05985 cytosine deaminase; Provisional
Probab=99.97 E-value=4.8e-29 Score=255.63 Aligned_cols=362 Identities=20% Similarity=0.185 Sum_probs=213.3
Q ss_pred cccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~ 123 (547)
+.+++|+|++|+++. ..+|+|++|+|.+|++.... +...++||++|++|+|||||+|+|+......
T Consensus 1 ~~~~~i~~~~i~~~~-----~~~v~i~~g~i~~i~~~~~~----~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~----- 66 (391)
T PRK05985 1 MTDLLFRNVRPAGGA-----AVDILIRDGRIAAIGPALAA----PPGAEVEDGGGALALPGLVDGHIHLDKTFWG----- 66 (391)
T ss_pred CCCEEEECcEECCCC-----eeEEEEECCEEEEecCCCCC----CCCCcEEECCCCEEecceEeeEEccCccccC-----
Confidence 357899999999974 34899999999999986432 2356799999999999999999999643210
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 008993 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (547)
Q Consensus 124 ~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~ 203 (547)
..|.... ..+
T Consensus 67 -----------------------------~~~~~~~---~~~-------------------------------------- 76 (391)
T PRK05985 67 -----------------------------DPWYPNE---PGP-------------------------------------- 76 (391)
T ss_pred -----------------------------CccccCC---CCC--------------------------------------
Confidence 0000000 000
Q ss_pred CCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHH
Q 008993 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (547)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 283 (547)
.+.+. ...... ....+.++........+..+.+.|+|++.++....++. ....++..
T Consensus 77 --------------------~~~~~-i~~~~~-~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~-~~~~~~~~ 133 (391)
T PRK05985 77 --------------------SLRER-IANERR-RRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDA-GLRHLEAV 133 (391)
T ss_pred --------------------CHHHH-HHHHHH-hhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCc-ccchHHHH
Confidence 00000 000000 01234556777888889999999999998876443321 11233444
Q ss_pred HHHHHHHhhCCCCeeEEEEccCccchh--hHHHHHHhcCCCCCCcEEEceEEEE-EcCCcCcchhhhhc--------eeE
Q 008993 284 ADVYQWASYSEKMKIRVCLFFPLETWS--SLADLINKTGHVLSDWVYLGGVKAF-ADGSLGSNSALFHE--------VAI 352 (547)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~--------v~~ 352 (547)
.++.+.+. +.+.+.+..+.+..... ...+.+++..+...+ -.+++... .+......-..+.+ +++
T Consensus 134 ~~~~~~~~--~~~~~~~v~~~~~g~~~~~~~~~ll~~~l~~g~~--~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~ 209 (391)
T PRK05985 134 LAARETLR--GLIDIQIVAFPQSGVLSRPGTAELLDAALRAGAD--VVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDI 209 (391)
T ss_pred HHHHHHhh--CcccEEEEeccCccccCCcCHHHHHHHHHHcCCC--EEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEE
Confidence 44433322 23444444333222111 111222221111111 11111110 01100000001101 555
Q ss_pred Ee--cccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC---h----hHHHHHHhCCcEEEecCccccCChhHHHHhhC
Q 008993 353 HA--IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA---S----GTAARFGDQGIVASMQPQHLLDDADSARKKLG 423 (547)
Q Consensus 353 H~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~---~----~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g 423 (547)
|. .++.........++... ..+.. .+..++|+..+. + +.++++++.|+.+.+|+...
T Consensus 210 Hv~e~~d~~~~~~~~~~e~~~-~~g~~-~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~~------------ 275 (391)
T PRK05985 210 HLHEPGELGAFQLERIAARTR-ALGMQ-GRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPGS------------ 275 (391)
T ss_pred eeCCCCCccHHHHHHHHHHHH-HhCCC-CCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCCC------------
Confidence 54 45544445445554443 23432 368999998653 3 45789999999998885421
Q ss_pred hhhhhhhchHHHHHHHCCCeeeecCCCCC------CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 424 VDRAERESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 424 ~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
.+.+|+++|.++|+++++|||++. .+.+++..+........ +..+ -+++++|+++|.|||+
T Consensus 276 -----~~~~~~~~l~~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~--~~~~~al~~~T~~~A~ 342 (391)
T PRK05985 276 -----VPVPPVAALRAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSG------FRTD--DELAAALDCVTHGGAR 342 (391)
T ss_pred -----CCCCCHHHHHHCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHc------cCCh--HHHHHHHHHHcchhHH
Confidence 556789999999999999999753 34567777664433211 0011 2468999999999999
Q ss_pred HcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993 498 ACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 498 ~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
++|+++ ++|++||.||||+++.+++. .+.. ...+..|+++|++||.
T Consensus 343 ~lg~~~--~~l~~G~~ADlvvld~~~~~~~~~~--~~~~~~v~~~G~~v~~ 389 (391)
T PRK05985 343 ALGLED--YGLAVGARADFVLVDAETVAEAVVA--VPVRRLVVRGGRIVAR 389 (391)
T ss_pred HhCCcc--cCCCCCCcCCEEEECCCCHHHHHhh--CCcceEEEECCEEEec
Confidence 999986 46999999999999998754 1111 3356779999999985
No 34
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.97 E-value=8e-29 Score=256.86 Aligned_cols=377 Identities=20% Similarity=0.252 Sum_probs=223.8
Q ss_pred cCCcccEEEEcCEEEeCCCC----------CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccc
Q 008993 41 TNLEADLVVTNGVIFTGDDS----------LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHV 110 (547)
Q Consensus 41 ~~~~~~~li~n~~v~~~~~~----------~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~ 110 (547)
-+.+..++|+|+++-.+... .....+|.|+||||.+|++.... +.+.++||++|++|+|||||+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~----~~~~~~id~~g~~v~Pg~id~H~ 82 (438)
T PRK07583 7 LPESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGA----PDELPAVDLKGRMVWPCFVDMHT 82 (438)
T ss_pred CCCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCC----CCCCceecCCCCcccCCccccee
Confidence 34666789999996544211 11345999999999999986531 23678999999999999999999
Q ss_pred ccccccccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhh
Q 008993 111 HFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGL 190 (547)
Q Consensus 111 H~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~ 190 (547)
|+..... |.+..+. .
T Consensus 83 Hld~~~~-------------------------------------~~~~~~~-~--------------------------- 97 (438)
T PRK07583 83 HLDKGHI-------------------------------------WPRSPNP-D--------------------------- 97 (438)
T ss_pred cccccee-------------------------------------cCCCCCC-C---------------------------
Confidence 9853311 0000000 0
Q ss_pred hcHHHHHHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCcc
Q 008993 191 ANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLIL-PWIPEVSVDERREALLRASNLALSRGVTTVVDFGR 269 (547)
Q Consensus 191 ~~~~~l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 269 (547)
|.+. ...+.+. .....++.+++.+.+..+++.+...|+|.+.....
T Consensus 98 --------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd 144 (438)
T PRK07583 98 --------------------------------GTFP-GALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLD 144 (438)
T ss_pred --------------------------------CCHH-HHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeec
Confidence 0000 0000000 00123445677777888999999999997776543
Q ss_pred CCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCcc-----chhhHHHHHHhcCCCCCCcEEEceEEEEEcC-CcCcc
Q 008993 270 YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE-----TWSSLADLINKTGHVLSDWVYLGGVKAFADG-SLGSN 343 (547)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~ 343 (547)
...... ...++...++.+... ..+.......++.+ ...++.+.+.+.+ ..+ +.+.+.+. .....
T Consensus 145 ~~~~~~-~~~~~~i~~~~~~~~--~~~~~~~v~~~p~~~~~~~~~~eL~~~v~~~~----gv~---g~~~~~~~~~d~~l 214 (438)
T PRK07583 145 SFAPQA-AISWEVFAELREAWA--GRIALQAVSLVPLDAYLTDAGERLADLVAEAG----GLL---GGVTYMNPDLDAQL 214 (438)
T ss_pred cCCCCc-ccHHHHHHHHHHHhh--ccCeEEEEEecChhhccCchHHHHHHHHHHcC----CEE---eCCCCCCCCHHHHH
Confidence 211100 122222323333322 22333333323221 1233333332221 001 11111111 00011
Q ss_pred hhhhhc-------eeEEec-ccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-------hhHHHHHHhCCcEEEecC
Q 008993 344 SALFHE-------VAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-------SGTAARFGDQGIVASMQP 408 (547)
Q Consensus 344 ~~~~~~-------v~~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~-------~~~l~~~~~~g~~~~~~p 408 (547)
...+.. +.+|+. ........+..+.+.....+. ..+..++|+..+. +++++++++.|+.+.+||
T Consensus 215 ~~i~~lA~~~G~~v~vH~~E~~~~~~~~l~~~~~~~~~~G~-~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P 293 (438)
T PRK07583 215 DRLFRLARERGLDLDLHVDETGDPASRTLKAVAEAALRNGF-EGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLP 293 (438)
T ss_pred HHHHHHHHHhCCCcEEeECCCCCchHHHHHHHHHHHHHhCC-CCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECc
Confidence 111111 788873 222222223334444444454 3468999999877 467999999999999999
Q ss_pred ccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCC------CCCCChHHHHHHHHcccCCCCCCCCCCCCCC
Q 008993 409 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP------VADINPLCAIRTAMKRIPPGWDNAWIPSERI 482 (547)
Q Consensus 409 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 482 (547)
.++.......... ..+. +...++++|.++|+++++|||+. .++.+++..+..+.... ..+.
T Consensus 294 ~~~~~l~~~~~~~--~p~~-~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~----------~~~~ 360 (438)
T PRK07583 294 MCNLYLQDRQPGR--TPRW-RGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRIL----------HLDH 360 (438)
T ss_pred chhhhhcCCCcCC--CCCC-CCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHH----------hcCC
Confidence 9764321110000 1122 45678999999999999999973 33467777777655321 1246
Q ss_pred CHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCC-hhhhcCCeEEEEEECcEEeC
Q 008993 483 SLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWED-FAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 483 ~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~-~~~~~~~~v~~v~v~G~~v~ 546 (547)
+++++|+++|.|||+++|+++ +|+|++||.|||+++|.+++.+ +.. ...++.||++|++|+
T Consensus 361 ~~~~al~~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~~~~~~~~~--~~~~~~V~~~G~~v~ 422 (438)
T PRK07583 361 PYDDWPAAVTTTPADIMGLPD-LGRIAVGAPADLVLFKARSFSELLSR--PQSDRIVLRAGKPID 422 (438)
T ss_pred cHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCCCHHHHHhc--CCCccEEEECCEEec
Confidence 889999999999999999987 8999999999999999998764 233 236788999999885
No 35
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.97 E-value=9.1e-29 Score=252.54 Aligned_cols=264 Identities=23% Similarity=0.220 Sum_probs=166.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEc----cCccch--hh
Q 008993 238 PEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLF----FPLETW--SS 311 (547)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~ 311 (547)
+..+.++.+......+..+.+.|+|++.+...+ +.+.+ ...+..+.++++.+++.+.+...+. ++.+.. ..
T Consensus 83 ~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~--~~~~~-~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~ 159 (371)
T cd01296 83 RAASEDELFASALRRLARMLRHGTTTVEVKSGY--GLDLE-TELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREE 159 (371)
T ss_pred HhCCHHHHHHHHHHHHHHHHHCCceEEEecccC--CCCHH-HHHHHHHHHHHHHhhCCCceEeeeeecccCCcccCChHH
Confidence 346778888999999999999999999875322 11111 1233566666666655555554332 121110 11
Q ss_pred -----HHHHHHhcCCCCCCcEEEceEEEEEcCCcCcc---hhhhhc-------eeEEecccHHHHHHHHHHHHHHHhcCC
Q 008993 312 -----LADLINKTGHVLSDWVYLGGVKAFADGSLGSN---SALFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGK 376 (547)
Q Consensus 312 -----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~ 376 (547)
..+.+...... -...+.+.+..+..... ...+.. +.+|+.+...... .+... ..+
T Consensus 160 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~~----~~~~~-~~g- 229 (371)
T cd01296 160 YIDLVIEEVLPAVAEE----NLADFCDVFCEKGAFSLEQSRRILEAAKEAGLPVKIHADELSNIGG----AELAA-ELG- 229 (371)
T ss_pred HHHHHHHHHHHHHHHh----CCCCEEEEeecCCccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCCH----HHHHH-HcC-
Confidence 11222211100 01233444433322111 111111 7888764321111 11111 112
Q ss_pred CCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCC-CCCCC
Q 008993 377 RDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW-PVADI 455 (547)
Q Consensus 377 ~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~-~~~~~ 455 (547)
...++|+.++++++++++++.|+.+.+||.++.. ++ ...+|++.++++|+++++|||+ |....
T Consensus 230 ---~~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~--------l~-----~~~~~~~~l~~~Gv~v~lgsD~~p~~~~ 293 (371)
T cd01296 230 ---ALSADHLEHTSDEGIAALAEAGTVAVLLPGTAFS--------LR-----ETYPPARKLIDAGVPVALGTDFNPGSSP 293 (371)
T ss_pred ---CCeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHH--------hC-----CCCCCHHHHHHCCCcEEEecCCCCCCCh
Confidence 3468999999999999999999999999986531 11 2356899999999999999997 33321
Q ss_pred --ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcC
Q 008993 456 --NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVS 532 (547)
Q Consensus 456 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~ 532 (547)
+++..+..++ ...+++++++++++|.|||+++|+++++|+|++||.|||+++|.|++. .+.....
T Consensus 294 ~~~l~~~~~~~~------------~~~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~ 361 (371)
T cd01296 294 TSSMPLVMHLAC------------RLMRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSYEHLAYRFGV 361 (371)
T ss_pred HHHHHHHHHHHH------------HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCchHhhhhhcCC
Confidence 2444444433 234689999999999999999999988999999999999999999876 3333345
Q ss_pred CeEEEEEECc
Q 008993 533 ASIEATYVSG 542 (547)
Q Consensus 533 ~~v~~v~v~G 542 (547)
.+++.||++|
T Consensus 362 ~~v~~v~~~G 371 (371)
T cd01296 362 NLVEYVIKNG 371 (371)
T ss_pred CCceEEEeCc
Confidence 5799999998
No 36
>PLN02942 dihydropyrimidinase
Probab=99.97 E-value=5.9e-28 Score=252.99 Aligned_cols=164 Identities=17% Similarity=0.164 Sum_probs=112.4
Q ss_pred CCCCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH----------hhChhhhhhhchHHHHHHHCCC
Q 008993 376 KRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK----------KLGVDRAERESYLFQSLLANNA 442 (547)
Q Consensus 376 ~~~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~l~~~Gv 442 (547)
..+.+.++.|+++... ++++.+++.| ++..+||+++..+.+.+.. ..++-|.+.....+.+++++|+
T Consensus 233 ~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~ 312 (486)
T PLN02942 233 FVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGI 312 (486)
T ss_pred HhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCc
Confidence 3456899999999988 8899888888 5556677766654443321 1122222122234578999999
Q ss_pred eeeecCCCCCCCCC-------hHH---------HH--HHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCC
Q 008993 443 LLALGSDWPVADIN-------PLC---------AI--RTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 504 (547)
Q Consensus 443 ~~~~GTD~~~~~~~-------~~~---------~~--~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~ 504 (547)
.+++|||+...+.+ ++. ++ ..++.. ......++++++++++|.|||+++|++++
T Consensus 313 i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~--------~~~~~~i~~~~~l~~~t~~pA~~lgl~~~ 384 (486)
T PLN02942 313 LQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDT--------MVESGQISPTDYVRVTSTECAKIFNIYPR 384 (486)
T ss_pred eEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 99999997554311 111 11 111100 11234589999999999999999999877
Q ss_pred cccccCCCcccEEEEcCCCCCChh--hhc-------------CCeEEEEEECcEEeCC
Q 008993 505 VGSLSPGKIADFVILSTSSWEDFA--AEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 505 ~GsI~~Gk~ADlvv~d~d~~~~~~--~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
+|+|++|++|||+++|.++...+. .+. ..+|..||++|++||+
T Consensus 385 ~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py~g~~l~g~v~~tiv~G~~v~~ 442 (486)
T PLN02942 385 KGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVYEGRRGKGKVEVTISQGRVVWE 442 (486)
T ss_pred CCCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCccCcEeeeeEEEEEECCEEEEE
Confidence 899999999999999988654222 110 5689999999999873
No 37
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=99.97 E-value=8.6e-28 Score=248.11 Aligned_cols=179 Identities=25% Similarity=0.259 Sum_probs=134.7
Q ss_pred eeEEec-ccHHHHHHHHH----HHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDM----YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|+. ...++....+. .-+.+...+..+.+..+.|+.++++++++.+++.|+.+.+||.+|.. ++
T Consensus 214 v~iH~~E~~~e~~~~~~~~g~~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~--------L~- 284 (421)
T COG0402 214 VHIHLAETLDEVERVLEPYGARPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLK--------LG- 284 (421)
T ss_pred eEEEecCcHHHHHHHHhhcCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhcc--------cc-
Confidence 888875 44445554441 12234456788889999999999999999999999999999998763 22
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCC--CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.+..|++++.+.|+++++|||+..++ .++|.++..+........ .......+. ++++++|.|+|++||+
T Consensus 285 ----sG~~p~~~~~~~gv~v~~gTD~~~~~~~~d~l~~~~~a~~l~~~~~---~~~~~~~~~-~~l~~aT~~gA~alg~- 355 (421)
T COG0402 285 ----SGIAPVRRLLERGVNVALGTDGAASNNVLDMLREMRTADLLQKLAG---GLLAAQLPG-EALDMATLGGAKALGL- 355 (421)
T ss_pred ----CCCCCHHHHHHcCCCEEEecCCccccChHHHHHHHHHHHHHHHhhc---CCCcccchH-HHHHHHHhhHHHHcCC-
Confidence 44678999999999999999987764 689999988866433211 011122222 4999999999999999
Q ss_pred CCcccccCCCcccEEEEcCCCCC--Chh---hhc----CCeEEEEEECcEEeC
Q 008993 503 NDVGSLSPGKIADFVILSTSSWE--DFA---AEV----SASIEATYVSGVQAY 546 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~~--~~~---~~~----~~~v~~v~v~G~~v~ 546 (547)
++.|+|++||.|||+++|.+... ... .+. ...|..||++|+.++
T Consensus 356 ~~~G~le~G~~ADlvvld~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~g~~v~ 408 (421)
T COG0402 356 DDIGSLEVGKKADLVVLDASAPHLAPLRPVSRLVFAAGGKDVDRVLVDGRLVM 408 (421)
T ss_pred cccCCcccccccCEEEEcCCCCccccccHHHHHHHhcCCCceeEEEECCEEEE
Confidence 55999999999999999987432 222 111 558999999999875
No 38
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.96 E-value=2.4e-27 Score=240.43 Aligned_cols=152 Identities=19% Similarity=0.195 Sum_probs=121.7
Q ss_pred HHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 370 VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 370 ~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+...+.++++..++||.++++++++++++.|+.+++||.++. +++ .+.+|+++|+++|+++++|||
T Consensus 222 ~l~~~g~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~--------~lg-----~g~~p~~~~~~~Gv~v~lGtD 288 (381)
T cd01312 222 FLDMLGGLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNR--------LLN-----GGKLDVSELKKAGIPVSLGTD 288 (381)
T ss_pred HHHHcCCCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhh--------hhc-----CCCcCHHHHHHCCCcEEEeCC
Confidence 4456688899999999999999999999999999999998543 233 344689999999999999999
Q ss_pred CCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--
Q 008993 450 WPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-- 525 (547)
Q Consensus 450 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-- 525 (547)
++.+ ..+++.+++.+...... ....+++.++|+|+|.|+|++||++ .|+|++||+|||+++|.+...
T Consensus 289 ~~~~~~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~ADlvv~d~~~~~~~ 359 (381)
T cd01312 289 GLSSNISLSLLDELRALLDLHPE-------EDLLELASELLLMATLGGARALGLN--NGEIEAGKRADFAVFELPGPGIK 359 (381)
T ss_pred CCccCCCCCHHHHHHHHHHhccc-------ccccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcccEEEEeCCCcCCC
Confidence 8764 35899999887764321 1113688999999999999999996 899999999999999976321
Q ss_pred --Chhhh--cCCeEEEEEECcE
Q 008993 526 --DFAAE--VSASIEATYVSGV 543 (547)
Q Consensus 526 --~~~~~--~~~~v~~v~v~G~ 543 (547)
++..+ ....|.+|||+|+
T Consensus 360 ~~~~~~~~~~~~~v~~v~v~G~ 381 (381)
T cd01312 360 EQAPLQFILHAKEVRHLFISGK 381 (381)
T ss_pred CccHHHHHHccCCCCEEEecCC
Confidence 11111 1668999999996
No 39
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.96 E-value=9.4e-28 Score=247.01 Aligned_cols=124 Identities=17% Similarity=0.125 Sum_probs=102.7
Q ss_pred CChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC---CCChHHHHHHHHcccCCCCC--CCCCCCCCCCHHHH
Q 008993 413 DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA---DINPLCAIRTAMKRIPPGWD--NAWIPSERISLTDA 487 (547)
Q Consensus 413 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~a 487 (547)
.+..+.+.+++.++. ++.+.|.++|+.+++|||+|+. +.+++..++.++.|....+. ........+++.++
T Consensus 333 ~D~~~a~srig~e~~----~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~iq~Av~rk~~~g~l~~~~~~~~~~~v~~a 408 (572)
T PRK13309 333 ADVAFAESRVRPETI----AAENVLHDMGVISMFSSDSQAMGRVGENWLRAIQTADAMKAARGKLPEDAAGNDNFRVLRY 408 (572)
T ss_pred CChhHHHHhhCchhh----cchhHHHhCCCEEEEcCCCCcccCCcccHHHHHHHHHHHHhccCCCCccCCCcccccHHHH
Confidence 445667778888666 8899999999999999999973 67899999999976432111 11123567899999
Q ss_pred HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+++|.|||+++|+++++|+|++||.|||+||+.++|.. ++..||++|++||.
T Consensus 409 L~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~~-------~~~~vi~~G~iv~~ 461 (572)
T PRK13309 409 VAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFGA-------KPKMVIKGGMINWA 461 (572)
T ss_pred HHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcCC-------CccEEEECCEEEEe
Confidence 999999999999999999999999999999999998863 67899999999983
No 40
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=3.2e-28 Score=233.23 Aligned_cols=181 Identities=23% Similarity=0.266 Sum_probs=136.1
Q ss_pred eeEEec-ccHHHHHHHHHHHH------HHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhh
Q 008993 350 VAIHAI-GDRANDLVLDMYKS------VVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKL 422 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 422 (547)
++.|.. -..++..+.+-+.+ .+...+++++...++|+.++++++++.|+++|..+.+||.++. .+
T Consensus 236 ~q~hIsen~~EI~~~~~ff~~~~~y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~--------~L 307 (439)
T KOG3968|consen 236 IQIHISENGKEIEAVKNFFPEKLSYTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNS--------IL 307 (439)
T ss_pred hhhhhhhcHHHHHHHHHhhhhcccchHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchh--------hh
Confidence 455543 23445555555433 3444678888999999999999999999999999999999764 22
Q ss_pred ChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 423 GVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 423 g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
+ .+.+++++|++.||.+.+|||-.. .+....++.++.....- ........||++++|.+||.|+|++||++
T Consensus 308 ~-----sG~~~vr~lL~~~v~VgLGtDv~~--~s~l~a~r~A~~~s~hL--~~~~~~~~Ls~~e~L~lATi~GA~aLg~d 378 (439)
T KOG3968|consen 308 G-----SGIPRVRELLDIGVIVGLGTDVSG--CSILNALRQAMPMSMHL--ACVLDVMKLSMEEALYLATIGGAKALGRD 378 (439)
T ss_pred c-----cCCccHHHHHhcCceEeecCCccc--cccHHHHHHHHHHHHHH--HhccCcccCCHHHHHHHHhccchhhccCC
Confidence 2 667799999999999999999643 44455555544432110 00114578999999999999999999999
Q ss_pred CCcccccCCCcccEEEEcCCCCC-Chhhh------c--------CCeEEEEEECcEEeCC
Q 008993 503 NDVGSLSPGKIADFVILSTSSWE-DFAAE------V--------SASIEATYVSGVQAYP 547 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~------~--------~~~v~~v~v~G~~v~~ 547 (547)
+..|++++||++|++++|.+..+ .+..+ . +.++..|||+|+.|++
T Consensus 379 ~~~Gs~eVGK~fDai~id~s~~~~~l~~~~~~~~lI~~~v~~g~drni~~V~V~Gk~v~~ 438 (439)
T KOG3968|consen 379 DTHGSLEVGKYFDAIIIDLSAPESPLYRFSGHHDLISKVVYNGDDRNIAEVFVAGKLVKQ 438 (439)
T ss_pred CcccceecccccceEEEeCCCCcchhhhccchHHHHHHHHhcCCCCceEEEEEccEEecc
Confidence 99999999999999999988553 22222 1 6699999999999874
No 41
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=99.96 E-value=3.2e-27 Score=247.72 Aligned_cols=165 Identities=19% Similarity=0.183 Sum_probs=109.3
Q ss_pred CCCCceEeecCCC-ChhHHHHHHhCC--cEEEecCccccCChhHHHH---hhC------hhhhhhhchHHHHHHHCCCee
Q 008993 377 RDQRFRIEHAQHL-ASGTAARFGDQG--IVASMQPQHLLDDADSARK---KLG------VDRAERESYLFQSLLANNALL 444 (547)
Q Consensus 377 ~~~~~~i~H~~~~-~~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~---~~g------~~~~~~~~~~~~~l~~~Gv~~ 444 (547)
.+.+.++.|.... +.++++..++.| +++.+||+++..+.+.+.. +.+ |-|.+.....+.++++.|+..
T Consensus 230 ~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~ 309 (454)
T TIGR02033 230 ANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEGAKYVCSPPLREKEDQDALWSALSSGALQ 309 (454)
T ss_pred hCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCcccccceeEECCCCCChhhHHHHHHHhhcCCeE
Confidence 3457788888873 356777788888 6678999998755544321 111 112111112266999999999
Q ss_pred eecCCCCCCCCC--------hHH---------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccc
Q 008993 445 ALGSDWPVADIN--------PLC---------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 507 (547)
Q Consensus 445 ~~GTD~~~~~~~--------~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~Gs 507 (547)
++|||+...+.. ++. ++........ ......++++++++++|.|||++||+++++|+
T Consensus 310 ~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~------~v~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~ 383 (454)
T TIGR02033 310 TVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDE------GVATGRITLEKFVELTSTNPAKIFNMYPRKGT 383 (454)
T ss_pred EEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHH------HHHcCCCCHHHHHHHHhhHHHHHcCCCCCCCc
Confidence 999997654311 111 2211111000 01234689999999999999999999766899
Q ss_pred ccCCCcccEEEEcCCCCC--Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 508 LSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 508 I~~Gk~ADlvv~d~d~~~--~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
|++|+.|||+++|.+... +...+ ...+|..||++|++||+
T Consensus 384 l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~ 438 (454)
T TIGR02033 384 IAVGSDADIVIWDPNRTTVISAETHHDNADYNPFEGFKVQGAVVSVLSRGRVVVE 438 (454)
T ss_pred cccCCcCCEEEEcCCcCeeechHHhhccCCCCcccCeEEeeeEEEEEECCEEEEE
Confidence 999999999999976432 11110 14589999999999873
No 42
>PRK09357 pyrC dihydroorotase; Validated
Probab=99.96 E-value=4.8e-27 Score=243.60 Aligned_cols=164 Identities=23% Similarity=0.259 Sum_probs=113.0
Q ss_pred CCCceEeecCCCChhHHHHHH-hCC--cEEEecCccccCChhHHH------HhhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLASGTAARFG-DQG--IVASMQPQHLLDDADSAR------KKLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~-~~g--~~~~~~p~~~~~~~~~~~------~~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.++.|.......++.+.+ +.| +++.+||++...+.+.+. +..++.|.+....++++++++|+..++||
T Consensus 224 g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~s 303 (423)
T PRK09357 224 GARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIAT 303 (423)
T ss_pred CCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhCcCCceEECCCCCCHHHHHHHHHHHHcCCCeEEec
Confidence 357899999987665555444 344 777799998876655432 22455555455678999999999999999
Q ss_pred CCCCCCCC----hH-------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEE
Q 008993 449 DWPVADIN----PL-------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFV 517 (547)
Q Consensus 449 D~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlv 517 (547)
|+...+.+ ++ .++...+..+. ..+..+..++++++++++|.|||+++|+++ |+|++|++|||+
T Consensus 304 Dh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~----~~~~~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~AD~~ 377 (423)
T PRK09357 304 DHAPHAREEKECEFEAAPFGITGLETALSLLY----TTLVKTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPADLV 377 (423)
T ss_pred CCCCCChHHccCCHhhCCCCceEHHHHHHHHH----HHHHHcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcCCEE
Confidence 98754422 01 01111111100 001134579999999999999999999975 999999999999
Q ss_pred EEcCCCC-C-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 518 ILSTSSW-E-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 518 v~d~d~~-~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
++|.+.. . +...+. ..+|..||++|++||+
T Consensus 378 i~d~~~~~~v~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~ 422 (423)
T PRK09357 378 IFDPEAEWTVDGEDFASKGKNTPFIGMKLKGKVVYTIVDGKIVYQ 422 (423)
T ss_pred EEcCCCCEEEchhhcccCCCCCCCcCCEEeeEEEEEEECCEEEec
Confidence 9997743 2 222221 5589999999999985
No 43
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=99.96 E-value=1.1e-27 Score=250.41 Aligned_cols=166 Identities=19% Similarity=0.149 Sum_probs=110.1
Q ss_pred CCCCCceEeecCCCCh-hHHHHHHhCCc--EEEecCccccCChhHHHH---------hhChhhhhhhchHHHHHHHCCCe
Q 008993 376 KRDQRFRIEHAQHLAS-GTAARFGDQGI--VASMQPQHLLDDADSARK---------KLGVDRAERESYLFQSLLANNAL 443 (547)
Q Consensus 376 ~~~~~~~i~H~~~~~~-~~l~~~~~~g~--~~~~~p~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~l~~~Gv~ 443 (547)
..+.+.++.|+..... +.++.+++.|+ +..+||+++..+.+.+.+ ..++-|.+....++.+++++|+.
T Consensus 228 ~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~~~g~~~~~~pplr~~~~~~~l~~~l~~G~i 307 (447)
T cd01314 228 LAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEGAKYVCSPPLRPKEDQEALWDGLSSGTL 307 (447)
T ss_pred HhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhccccccccceEECCCCCChHHHHHHHHHHhCCCe
Confidence 3456888999986543 34677777775 457899987655444311 11222222333457799999999
Q ss_pred eeecCCCCCCCC--ChHH--------------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccc
Q 008993 444 LALGSDWPVADI--NPLC--------------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 507 (547)
Q Consensus 444 ~~~GTD~~~~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~Gs 507 (547)
..+|||+...+. +++. ++........ ......++++++++++|.|||++||+.+++|+
T Consensus 308 ~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~------~~~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~ 381 (447)
T cd01314 308 QTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSE------GVAKGRITLEKFVELTSTNPAKIFGLYPRKGT 381 (447)
T ss_pred eEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHH------HHHcCCCCHHHHHHHHhhHHHHHhCCCCCCCc
Confidence 999999865432 1110 1211111000 01234599999999999999999999777899
Q ss_pred ccCCCcccEEEEcCCCCC--C------------hhhhc-CCeEEEEEECcEEeCC
Q 008993 508 LSPGKIADFVILSTSSWE--D------------FAAEV-SASIEATYVSGVQAYP 547 (547)
Q Consensus 508 I~~Gk~ADlvv~d~d~~~--~------------~~~~~-~~~v~~v~v~G~~v~~ 547 (547)
|++||+|||+|+|.+... + ..... ..+|..||++|++||+
T Consensus 382 l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~ 436 (447)
T cd01314 382 IAVGSDADLVIWDPNAEKTISADTHHHNVDYNIFEGMKVKGWPVVTISRGKVVVE 436 (447)
T ss_pred cCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcccCeEEeeeEEEEEECCEEEEE
Confidence 999999999999976321 1 11111 4589999999999873
No 44
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=99.96 E-value=5.8e-27 Score=241.49 Aligned_cols=370 Identities=21% Similarity=0.213 Sum_probs=201.4
Q ss_pred cEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccc---cccc
Q 008993 46 DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQ---MARV 122 (547)
Q Consensus 46 ~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~---~~~~ 122 (547)
+++|+|++|+++.+.....++|+|+||||++|++... +...++||++|++|+|||||+|+|+..+... ....
T Consensus 1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~-----~~~~~~iD~~G~~v~PG~iD~H~H~~~~~~~~~~~~~a 75 (415)
T cd01297 1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILS-----TSAREVIDAAGLVVAPGFIDVHTHYDGQVFWDPDLRPS 75 (415)
T ss_pred CEEEECCEEECCCCCccccceEEEECCEEEEEecCCC-----CCCCeEEECCCCEEccCEeeeeecCCcccccCcchhhH
Confidence 4789999999987765567799999999999987532 2456899999999999999999999764321 0111
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCCh--hhhhhhC------CCCeEEEEecCCchhhhcH-
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMA--SWIDDIT------PHNPVWLSRMDGHMGLANS- 193 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~ld~~~------~~~p~~~~~~~~~~~~~~~- 193 (547)
...|+||.-++-.. ..+.. ..+.+ ...+... ...+ + ++......
T Consensus 76 ~~~GvTt~~~~~~~------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~ 128 (415)
T cd01297 76 SRQGVTTVVLGNCG------------------VSPAP---ANPDDLARLIMLMEGLVALGEGLP---W---GWATFAEYL 128 (415)
T ss_pred HhCcEEEEEecccc------------------CccCC---CChhhhhhhhhhhhcccccccccC---C---CCCCHHHHH
Confidence 22344332111000 00000 00000 0000000 0000 0 00000000
Q ss_pred HHHHHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCC
Q 008993 194 VALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPG 273 (547)
Q Consensus 194 ~~l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 273 (547)
..++..+... .-+.+. +.+.+....+.. .....+.++ .+.+...++++.+.|+.+++....|.+.
T Consensus 129 ~~~~~~~~~~-----~~~~~~------~h~~l~~~~~g~---~~~~~~~~~-~~~~~~l~~~al~~Ga~g~~~~~~y~~~ 193 (415)
T cd01297 129 DALEARPPAV-----NVAALV------GHAALRRAVMGL---DAREATEEE-LAKMRELLREALEAGALGISTGLAYAPR 193 (415)
T ss_pred HHHHhcCCCc-----Ceeecc------CcHHHHHHHhCc---CCCCCCHHH-HHHHHHHHHHHHHCCCeEEEcccccCCc
Confidence 0010111000 000000 001111100000 001233333 3446666777788999999876544321
Q ss_pred cccccchhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhceeEE
Q 008993 274 ESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIH 353 (547)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~H 353 (547)
. ..+..++.++++.+.+.+. . +.+|
T Consensus 194 ~--~~~~~~l~~~~~~a~~~g~-~----------------------------------------------------v~~H 218 (415)
T cd01297 194 L--YAGTAELVALARVAARYGG-V----------------------------------------------------YQTH 218 (415)
T ss_pred c--cCCHHHHHHHHHHHHHcCC-E----------------------------------------------------EEEE
Confidence 1 1244566666666555432 2 4555
Q ss_pred eccc--HHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCh----------hHHHHHHhCC--cEEEecCccccCChhHHH
Q 008993 354 AIGD--RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS----------GTAARFGDQG--IVASMQPQHLLDDADSAR 419 (547)
Q Consensus 354 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~----------~~l~~~~~~g--~~~~~~p~~~~~~~~~~~ 419 (547)
+..+ .....+.++++.. ...+.+.++.|+..... +.+++.++.| ++..+||.+...
T Consensus 219 ~e~~~~~e~~av~~~~~~a----~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~~~------ 288 (415)
T cd01297 219 VRYEGDSILEALDELLRLG----RETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAEGLQVTADVYPYGAGS------ 288 (415)
T ss_pred ECcccccHHHHHHHHHHHH----HHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHhCCcEEEEeCCCCCCc------
Confidence 5422 1222222222222 12245889999997765 5566666654 667788965432
Q ss_pred HhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC---CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 008993 420 KKLGVDRAERESYLFQSLLANNALLALGSDWPVAD---INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAA 496 (547)
Q Consensus 420 ~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A 496 (547)
..+++.+.++ ..+++|||++..+ ......+...+... ......++++++++++|.|||
T Consensus 289 -----------~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~t~~pA 349 (415)
T cd01297 289 -----------EDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGDFTRVLGHY-------VRERKLLSLEEAVRKMTGLPA 349 (415)
T ss_pred -----------HHHHHHHHcC-CCceeeeCCCcCCCCCcchhCCHHHHHHHH-------hcccCCCCHHHHHHHHHHHHH
Confidence 2356778888 8999999986532 11111111111000 002234899999999999999
Q ss_pred HHcccCCCcccccCCCcccEEEEcCCCCCChh-----hhcCCeEEEEEECcEEeCC
Q 008993 497 RACFLENDVGSLSPGKIADFVILSTSSWEDFA-----AEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 497 ~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~-----~~~~~~v~~v~v~G~~v~~ 547 (547)
+++|+++ +|+|++|+.|||+|+|.+.+.... ......|..||++|++||+
T Consensus 350 ~~~gl~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~v~~viv~G~~v~~ 404 (415)
T cd01297 350 RVFGLAD-RGRIAPGYRADIVVFDPDTLADRATFTRPNQPAEGIEAVLVNGVPVVR 404 (415)
T ss_pred HHhCCCC-CceeCCCCCCCEEEEcccccccccchhhhccCCCCceEEEECCEEEEE
Confidence 9999985 699999999999999988654221 1124579999999999873
No 45
>PRK07627 dihydroorotase; Provisional
Probab=99.96 E-value=1.4e-27 Score=245.14 Aligned_cols=168 Identities=21% Similarity=0.272 Sum_probs=109.9
Q ss_pred CCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.+|.|.+.... +.+...++.| +++.+||+++..+.+.+.. ..+|-|.+.....+++.+++|...+++|
T Consensus 226 ~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~S 305 (425)
T PRK07627 226 GARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICS 305 (425)
T ss_pred CCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhccCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEc
Confidence 34778888875432 3344455565 7788999998766554432 2334444344456788899999999999
Q ss_pred CC-CCCC---CChHHHHHHHHcccCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC
Q 008993 449 DW-PVAD---INPLCAIRTAMKRIPPGWD--NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 522 (547)
Q Consensus 449 D~-~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d 522 (547)
|+ |... ..++.....++.+...... ..+..+.+++++++++++|.|||+++|+ . .|+|++|+.|||+++|.+
T Consensus 306 DHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~~~~~~i~~~~~l~~~t~~pA~~lg~-~-~G~l~~G~~ADlvv~d~~ 383 (425)
T PRK07627 306 DHTPVDDDEKLLPFAEATPGATGLELLLPLTLKWADEAKVPLARALARITSAPARVLGL-P-AGRLAEGAPADLCVFDPD 383 (425)
T ss_pred CCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcCCEEEECCC
Confidence 98 3321 1122222221111110000 0012355799999999999999999999 3 699999999999999987
Q ss_pred C-CC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 523 S-WE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 523 ~-~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
. +. +..++. ..+|..||++|++||+
T Consensus 384 ~~~~v~~~~~~s~~~~sp~~g~~~~g~v~~t~v~G~~v~~ 423 (425)
T PRK07627 384 AHWRVEPRALKSQGKNTPFLGYELPGRVRATLVAGQVAFE 423 (425)
T ss_pred CcEEEChhhccccCCCCCCcCCEeeeEEEEEEECCEEEee
Confidence 3 33 322332 2589999999999984
No 46
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.96 E-value=9e-27 Score=236.22 Aligned_cols=95 Identities=25% Similarity=0.264 Sum_probs=76.0
Q ss_pred chHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccC
Q 008993 431 SYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSP 510 (547)
Q Consensus 431 ~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~ 510 (547)
..+++.++++|+++++|||+.. .+++..+.... ...+++++++++++|.|||+++|++++ |+|++
T Consensus 287 ~~~~~~~~~~Gv~~~lgSD~~p--~~~~~~~~~~~------------~~~gls~~~al~~~T~npA~~lgl~~~-G~I~~ 351 (383)
T PRK15446 287 NVSALDLAAAGLLDILSSDYYP--ASLLDAAFRLA------------DDGGLDLPQAVALVTANPARAAGLDDR-GEIAP 351 (383)
T ss_pred hHhHHHHHHCCCcEEEEcCCCh--hhHHHHHHHHH------------HhcCCCHHHHHHHHhHHHHHHcCCCCC-cCcCC
Confidence 4567889999999999999732 23444333221 345799999999999999999999874 99999
Q ss_pred CCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 511 GKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 511 Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
||.|||+++|.++. ..++..||++|++||+
T Consensus 352 G~~ADlvv~d~~~~-------~~~v~~v~~~G~~v~~ 381 (383)
T PRK15446 352 GKRADLVRVRRAGG-------LPVVRAVWRGGRRVFL 381 (383)
T ss_pred CCcCCEEEEcCCCC-------CcchheEEECCEEEEe
Confidence 99999999998831 1278899999999874
No 47
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.96 E-value=7.3e-27 Score=239.81 Aligned_cols=146 Identities=19% Similarity=0.160 Sum_probs=105.9
Q ss_pred CChhHHHHHHhCCcEEE-ecCcc--------------------c---cCChhHHHHhhChhhhhhhchHHHHHHHCCCee
Q 008993 389 LASGTAARFGDQGIVAS-MQPQH--------------------L---LDDADSARKKLGVDRAERESYLFQSLLANNALL 444 (547)
Q Consensus 389 ~~~~~l~~~~~~g~~~~-~~p~~--------------------~---~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~ 444 (547)
-.++.++.++..++.++ ++|.. + ..+..+.+.|+.++.. ..-..|.++|+..
T Consensus 281 hapdii~~~~~~~v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~----~ae~~l~d~Ga~~ 356 (568)
T PRK13207 281 HAPDIIKVAGEPNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETI----AAEDILHDLGAIS 356 (568)
T ss_pred CchHHHHHhhcCCCccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceee----cccchhhhCCCEE
Confidence 34777888888886544 22321 1 1223334444444332 3345678999999
Q ss_pred eecCCCCCCC---CChHHHHHHHHcccCCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEE
Q 008993 445 ALGSDWPVAD---INPLCAIRTAMKRIPPGWD----NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFV 517 (547)
Q Consensus 445 ~~GTD~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlv 517 (547)
++|||+++.+ .+++..++.++.|....+. ..|...+.++.+ |+++|.|||+++|+++.+|+|++||.|||+
T Consensus 357 ~~~SD~p~~~~~~~~~~r~~q~A~~r~~~~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~ADlV 434 (568)
T PRK13207 357 MISSDSQAMGRVGEVIIRTWQTAHKMKVQRGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLADLV 434 (568)
T ss_pred EecCCcccccccccchhHHHHHHHHHHHccCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcCCEE
Confidence 9999999773 6789999999887643221 124445566655 999999999999999999999999999999
Q ss_pred EEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 518 ILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 518 v~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+|+.++|.. ++..||++|+++|.
T Consensus 435 vld~d~f~~-------~~~~ti~~G~iv~~ 457 (568)
T PRK13207 435 LWKPAFFGV-------KPELVLKGGMIAWA 457 (568)
T ss_pred EECchhcCC-------CceEEEECCEEEEe
Confidence 999998753 68899999999873
No 48
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=7.9e-27 Score=235.63 Aligned_cols=154 Identities=21% Similarity=0.199 Sum_probs=115.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCC---------hhHHHH
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDD---------ADSARK 420 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~---------~~~~~~ 420 (547)
+.+|+.++..+..++++ + ...++|+.++++++++++++.|+.++.||.+.... ......
T Consensus 176 v~~H~~~~~~i~~~l~~--------G----~~~i~H~~~~~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T cd01299 176 VAAHAYGAEAIRRAIRA--------G----VDTIEHGFLIDDETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAE 243 (342)
T ss_pred EEEEeCCHHHHHHHHHc--------C----CCEEeecCCCCHHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHH
Confidence 89998877666654432 2 45899999999999999999999999998754311 000011
Q ss_pred hhChhhhhhhchHHHHHHHCCCeeeecCCCCCC---CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 421 KLGVDRAERESYLFQSLLANNALLALGSDWPVA---DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 421 ~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
.....+. ....+++.+.++|+++++|||++.. ..+.+.++... .+.+++++++|+++|.|||+
T Consensus 244 ~~~~~~~-~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~~e~~~~-------------~~~~~~~~~al~~~T~~~a~ 309 (342)
T cd01299 244 KVALVLE-AGRDALRRAHKAGVKIAFGTDAGFPVPPHGWNARELELL-------------VKAGGTPAEALRAATANAAE 309 (342)
T ss_pred HHHHHHH-HHHHHHHHHHHcCCeEEEecCCCCCCCchhHHHHHHHHH-------------HHhCCCHHHHHHHHHHHHHH
Confidence 1111123 5567899999999999999998741 22344444432 23468999999999999999
Q ss_pred HcccCCCcccccCCCcccEEEEcCCCCCChhh
Q 008993 498 ACFLENDVGSLSPGKIADFVILSTSSWEDFAA 529 (547)
Q Consensus 498 ~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~ 529 (547)
++|+++++|+|++||.|||+|++.||++++.+
T Consensus 310 ~~g~~~~~G~i~~G~~ADlvvl~~~pl~di~~ 341 (342)
T cd01299 310 LLGLSDELGVIEAGKLADLLVVDGDPLEDIAV 341 (342)
T ss_pred HhCccCCcceECCCCcCCEEEECCChhhhhhh
Confidence 99998889999999999999999999987664
No 49
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.95 E-value=3.3e-26 Score=231.25 Aligned_cols=126 Identities=25% Similarity=0.266 Sum_probs=87.8
Q ss_pred CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHccc
Q 008993 389 LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRI 468 (547)
Q Consensus 389 ~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~ 468 (547)
++.+..+.+.+.|+.+..+...... +. .+....+++.++++|+..+++||+.. .+++..+.....
T Consensus 251 ~t~e~a~~~~~~G~~v~~~~p~~~r---------~~--~~~~~~~l~~~~~~G~~~~l~SD~~p--~~~l~~~~~~~~-- 315 (376)
T TIGR02318 251 TTLEAAKEARSLGMQILMGAPNIVR---------GG--SHSGNLSARELAHEGLLDVLASDYVP--ASLLLAAFQLAD-- 315 (376)
T ss_pred CCHHHHHHHHHcCCeEEECCccccc---------cc--cccchHHHHHHHHCCCcEEEEcCCCc--HHHHHHHHHHHH--
Confidence 4555666666677765555221110 00 00223567899999999999999833 233333332111
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 469 PPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 469 ~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
...+++++++++++|.|||+.+|+++ +|+|++||+|||++++.+.. ..++..||++|++||
T Consensus 316 ---------~~~gl~~~~al~~~T~npA~~lgl~~-~G~I~~G~~ADlvvvd~~~~-------~~~v~~v~~~G~~v~ 376 (376)
T TIGR02318 316 ---------DVEGIPLPQAVKMVTKNPARAVGLSD-RGSIAPGKRADLVRVHRVDG-------VPRIRAVWRAGRRVY 376 (376)
T ss_pred ---------hhcCCCHHHHHHHHhHHHHHHcCCCC-CCcCCCCCcccEEEEcCCCC-------CccceEEEECCEEeC
Confidence 22468999999999999999999985 79999999999999998421 128899999999997
No 50
>PRK08323 phenylhydantoinase; Validated
Probab=99.95 E-value=5.5e-27 Score=246.02 Aligned_cols=166 Identities=17% Similarity=0.082 Sum_probs=108.0
Q ss_pred CCCCCceEeecCCC-ChhHHHHHHhCCc--EEEecCccccCChhHHHHh----------hChhhhhhhchHHHHHHHCCC
Q 008993 376 KRDQRFRIEHAQHL-ASGTAARFGDQGI--VASMQPQHLLDDADSARKK----------LGVDRAERESYLFQSLLANNA 442 (547)
Q Consensus 376 ~~~~~~~i~H~~~~-~~~~l~~~~~~g~--~~~~~p~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~l~~~Gv 442 (547)
..+.+.++.|.... +.+.++.+++.|+ ++.+||++...+......- .++-|.+....++.+++++|+
T Consensus 226 ~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~ 305 (459)
T PRK08323 226 LAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGD 305 (459)
T ss_pred HhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHhhcCC
Confidence 34568888888854 3446667778884 4679999776444332210 122222222345789999999
Q ss_pred eeeecCCCCCCCCC--h------H---------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCc
Q 008993 443 LLALGSDWPVADIN--P------L---------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDV 505 (547)
Q Consensus 443 ~~~~GTD~~~~~~~--~------~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~ 505 (547)
..++|||+...+.+ . + .++........ ......++++++++++|.|||+++|+.+++
T Consensus 306 i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~------~~~~~~~~~~~~~~~~t~~pA~~lgl~~~~ 379 (459)
T PRK08323 306 LQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSE------GVMTGRITLNRFVELTSTNPAKIFGLYPRK 379 (459)
T ss_pred eeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHH------HHHcCCCCHHHHHHHHhhHHHHHhCCCCCC
Confidence 99999998655321 1 0 11111111000 012346899999999999999999996668
Q ss_pred ccccCCCcccEEEEcCCCC-C-------------Chhhhc-CCeEEEEEECcEEeCC
Q 008993 506 GSLSPGKIADFVILSTSSW-E-------------DFAAEV-SASIEATYVSGVQAYP 547 (547)
Q Consensus 506 GsI~~Gk~ADlvv~d~d~~-~-------------~~~~~~-~~~v~~v~v~G~~v~~ 547 (547)
|+|++|+.|||+|||.+.. . +..... ..+|..||++|++||+
T Consensus 380 G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~~g~~~~g~v~~viv~G~~v~~ 436 (459)
T PRK08323 380 GTIAVGADADIVIWDPNATKTISASTLHSNVDYNPYEGFEVTGWPVTTLSRGEVVVE 436 (459)
T ss_pred cccCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcccCcEEeeeEEEEEECCEEEEE
Confidence 9999999999999997621 1 111111 4588999999999863
No 51
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.95 E-value=2.4e-26 Score=235.32 Aligned_cols=106 Identities=18% Similarity=0.158 Sum_probs=90.3
Q ss_pred HHHHHHHCCCeeeecCCCCC------CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcc
Q 008993 433 LFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVG 506 (547)
Q Consensus 433 ~~~~l~~~Gv~~~~GTD~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~G 506 (547)
.-..|.+.|+..++|||+++ ...++|..+..+..+... ...|...+.++.+++|+++|.|||+++|+++.+|
T Consensus 351 ae~~l~d~G~~~~~~SDs~~~~~~~e~~~~~~q~a~~~~~rr~~--l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~G 428 (573)
T PRK13206 351 AEDVLHDMGAISMIGSDSQAMGRIGEVVLRTWQTAHVMKRRRGA--LPGDGRADNNRARRYVAKYTICPAVAHGIDHEIG 428 (573)
T ss_pred cCchHhhCCcEEeccCCccccccccchhhhHHHHHHHHHhccCC--CCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCc
Confidence 34578899999999999997 446899999999887543 1123347789999999999999999999998899
Q ss_pred cccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 507 SLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 507 sI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+|++||.|||++|+.++|.. ++..||++|+++|.
T Consensus 429 sLe~Gk~ADlVvld~d~f~~-------~~~~ti~~G~iv~~ 462 (573)
T PRK13206 429 SVEVGKLADLVLWEPAFFGV-------RPHAVLKGGAIAWA 462 (573)
T ss_pred ccCCCCcCCEEEECccccCC-------CccEEEECCEEEEe
Confidence 99999999999999988753 78899999999873
No 52
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=1.3e-26 Score=233.90 Aligned_cols=163 Identities=28% Similarity=0.313 Sum_probs=126.9
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.....+..+++..++. + .+..++|+... .+.++++++.++.+.++|.+...... ..+. .
T Consensus 195 v~vHa~~~~~i~~~l~~~~e~----g---~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~~~-------~~~~-~ 258 (359)
T cd01309 195 VRIHAHRADDILTAIRIAKEF----G---IKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKV-------EEVN-D 258 (359)
T ss_pred EEEEeCCHHHHHHHHHHHHHc----C---CCEEEECchhH-HHHHHHHHHcCCCEEECccccccccH-------HHhh-c
Confidence 788888777777777666553 2 25789999987 77889999999999999986543221 0111 4
Q ss_pred hchHHHHHHHCC-CeeeecCCCCCCCCC-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccc
Q 008993 430 ESYLFQSLLANN-ALLALGSDWPVADIN-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 507 (547)
Q Consensus 430 ~~~~~~~l~~~G-v~~~~GTD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~Gs 507 (547)
...+.+.+.++| +++++|||++..... .+..+..+ ...+++++++|+++|.|||+++|+++++|+
T Consensus 259 ~~~~~~~l~~aGGv~valgsD~~~~~~~~l~~~~~~a-------------~~~gl~~~~al~~~T~n~A~~lg~~~~~G~ 325 (359)
T cd01309 259 AIDTNAYLLKKGGVAFAISSDHPVLNIRNLNLEAAKA-------------VKYGLSYEEALKAITINPAKILGIEDRVGS 325 (359)
T ss_pred chhhHHHHHHcCCceEEEECCCCCccchhHHHHHHHH-------------HHcCCCHHHHHHHHHHHHHHHhCCCCCccc
Confidence 456788999998 999999999764333 22222211 234689999999999999999999998999
Q ss_pred ccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 508 LSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 508 I~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
|++||.|||++|++||++. ..++..||++|++||
T Consensus 326 l~~G~~ADlvv~d~dpl~~-----~~~v~~v~i~G~~v~ 359 (359)
T cd01309 326 LEPGKDADLVVWNGDPLEP-----TSKPEQVYIDGRLVY 359 (359)
T ss_pred CCCCCccCEEEECCCcccc-----cCcccEEEECCEEeC
Confidence 9999999999999999875 348999999999987
No 53
>PRK09236 dihydroorotase; Reviewed
Probab=99.95 E-value=1.1e-25 Score=233.87 Aligned_cols=137 Identities=17% Similarity=0.223 Sum_probs=88.2
Q ss_pred cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC--------------ChHHHH
Q 008993 402 IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDWPVADI--------------NPLCAI 461 (547)
Q Consensus 402 ~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~--------------~~~~~~ 461 (547)
++..+||++...+.+.+.. ..++-|......++++++++|+..++|||+..... ..++.+
T Consensus 256 vt~e~~~H~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~ 335 (444)
T PRK09236 256 ITAEVCVHHLWFDDSDYARLGNLIKCNPAIKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHA 335 (444)
T ss_pred EEEEEchhhhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHH
Confidence 4555666665544433321 11111222344578899999999999999754321 011111
Q ss_pred HHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCC-CC-Chhhhc--------
Q 008993 462 RTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS-WE-DFAAEV-------- 531 (547)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~-~~-~~~~~~-------- 531 (547)
...+.. ...+.++|++++++++|.|||+++|+++ +|+|++|++|||+++|.+. +. +..++.
T Consensus 336 l~~l~~--------~v~~~~~~~~~~~~~~t~~pA~~lgl~~-~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~ 406 (444)
T PRK09236 336 LPALLE--------LVHEGKLSLEKVVEKTSHAPAILFDIKE-RGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSPF 406 (444)
T ss_pred HHHHHH--------HHHhcCCCHHHHHHHHHHhHHHhcCCCC-CCccccCCcCCEEEEcCCCCEEEchHHhcccCCCCCC
Confidence 111110 1124469999999999999999999965 7999999999999999662 22 222221
Q ss_pred -----CCeEEEEEECcEEeCC
Q 008993 532 -----SASIEATYVSGVQAYP 547 (547)
Q Consensus 532 -----~~~v~~v~v~G~~v~~ 547 (547)
..+|.+||++|++||+
T Consensus 407 ~g~~~~g~v~~t~v~G~~v~~ 427 (444)
T PRK09236 407 EGRTFRSRVATTFVNGQLVYH 427 (444)
T ss_pred CCCEEeeeEEEEEECCEEEEE
Confidence 4489999999999873
No 54
>PRK06189 allantoinase; Provisional
Probab=99.95 E-value=3.1e-26 Score=238.46 Aligned_cols=162 Identities=16% Similarity=0.117 Sum_probs=105.5
Q ss_pred CCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|.+.... +.++..++.| +++.+||++...+.+.+.. ..++-|.+....++.++++.|+..++|||
T Consensus 233 ~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sD 312 (451)
T PRK06189 233 CPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGEIDMISSD 312 (451)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCCceEEECC
Confidence 3678888775432 3344455555 7788999987766554432 22333333344567889999999999999
Q ss_pred CCCCCC------ChHH--------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCccc
Q 008993 450 WPVADI------NPLC--------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIAD 515 (547)
Q Consensus 450 ~~~~~~------~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~AD 515 (547)
+...+. +.+. +......... ...+.+++++++++++|.|||++||+++ +|+|++|++||
T Consensus 313 h~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~------~~~~~~l~~~~~~~~~t~npA~~lgl~~-~G~l~~G~~AD 385 (451)
T PRK06189 313 HSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTE------GYIERGIPLETIARLLATNPAKRFGLPQ-KGRLEVGADAD 385 (451)
T ss_pred CCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHH------HHhcCCCCHHHHHHHHhhhHHHHhCCCC-CCcccCCCcCC
Confidence 854321 1110 0111000000 0134569999999999999999999954 79999999999
Q ss_pred EEEEcCC-CCC-Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 516 FVILSTS-SWE-DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 516 lvv~d~d-~~~-~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
|+|+|.+ ++. ....+ ...+|..|+++|++||.
T Consensus 386 lvi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~tiv~G~~v~~ 432 (451)
T PRK06189 386 FVLVDLDETYTLTKEDLFYRHKQSPYEGRTFPGRVVATYLRGQCVYQ 432 (451)
T ss_pred EEEEcCCCCEEECHHHhhhcCCCCCcCCcEEEeEEEEEEECCEEEEE
Confidence 9999986 222 11111 14579999999999873
No 55
>PRK07575 dihydroorotase; Provisional
Probab=99.95 E-value=1e-25 Score=233.23 Aligned_cols=160 Identities=18% Similarity=0.213 Sum_probs=109.1
Q ss_pred CCCceEeecCCCChhHHHHHHhC---CcEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLASGTAARFGDQ---GIVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~~~---g~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.++++.|.+ +.+.++.+++. .++..+||++...+.+.+.. ..++-|......++.+++++|+..+++|
T Consensus 225 g~~lhi~HiS--t~~~v~~i~~~k~~~vt~ev~phhL~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~s 302 (438)
T PRK07575 225 QRRLHILHLS--TAIEAELLRQDKPSWVTAEVTPQHLLLNTDAYERIGTLAQMNPPLRSPEDNEALWQALRDGVIDFIAT 302 (438)
T ss_pred CCCEEEEECC--CHHHHHHHHHhcCCCEEEEEchhhheeCHHHHhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEec
Confidence 4478888988 55666554422 37889999998766655432 2233444344567889999999999999
Q ss_pred CCCCCCC------------C-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCccc
Q 008993 449 DWPVADI------------N-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIAD 515 (547)
Q Consensus 449 D~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~AD 515 (547)
|+...+. . +..++...+... ...+.++|++++++++|.|||++||+++ +|+|++|++||
T Consensus 303 Dh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~-------~~~~~~lsl~~~~~~~s~npAk~lgl~~-~G~L~~G~~AD 374 (438)
T PRK07575 303 DHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLT-------AAMRGKCTVAQVVRWMSTAVARAYGIPN-KGRIAPGYDAD 374 (438)
T ss_pred CCCCCCHHHccCCcccCCCCcccHHHHHHHHHH-------HHhcCCCCHHHHHHHHhhhHHHHcCCCC-CCccCCCCcCC
Confidence 9765431 1 122222221110 0124569999999999999999999965 69999999999
Q ss_pred EEEEcCCCCC--Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 516 FVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 516 lvv~d~d~~~--~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
|+|+|.+... +...+. ..++..||++|++||+
T Consensus 375 lvi~D~~~~~~v~~~~~~s~~~~sp~~g~~~~G~v~~tiv~G~~v~~ 421 (438)
T PRK07575 375 LVLVDLNTYRPVRREELLTKCGWSPFEGWNLTGWPVTTIVGGQIVFD 421 (438)
T ss_pred EEEEcCCCCEEEchHHccccCCCCCCCCCEEeeEEEEEEECCEEEEE
Confidence 9999976432 222111 3468999999999873
No 56
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=99.95 E-value=1.7e-25 Score=227.88 Aligned_cols=142 Identities=20% Similarity=0.233 Sum_probs=100.7
Q ss_pred CceEeecCCCC-----------hhHHHHHHhCCcEE-EecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC-eeee
Q 008993 380 RFRIEHAQHLA-----------SGTAARFGDQGIVA-SMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLAL 446 (547)
Q Consensus 380 ~~~i~H~~~~~-----------~~~l~~~~~~g~~~-~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv-~~~~ 446 (547)
...+.||.+.+ .++++.+++.|+.+ ..++.+.. .....+.++++|+ ++++
T Consensus 210 g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~~-----------------~~~~~~~~l~~G~~~~~l 272 (379)
T PRK12394 210 GDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGRSHF-----------------DMNVARRAIANGFLPDII 272 (379)
T ss_pred CCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCcccc-----------------chHHHHHHHHCCCCceEE
Confidence 45778887632 34667788899876 55554221 1123568889995 8999
Q ss_pred cCCCCCCC--CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCC
Q 008993 447 GSDWPVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSW 524 (547)
Q Consensus 447 GTD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~ 524 (547)
|||+..++ .+++..+...+.+. ...+++++++++++|.|||+++|+++++|+|++|+.|||++++.+..
T Consensus 273 gTD~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G~~ADl~~~~~~~~ 343 (379)
T PRK12394 273 SSDLSTITKLAWPVYSLPWVLSKY---------LALGMALEDVINACTHTPAVLMGMAAEIGTLAPGAFADIAIFKLKNR 343 (379)
T ss_pred ECCCCCCCcccCccchHHHHHHHH---------HHcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCccCEEEEecCcC
Confidence 99987654 23334444433321 24579999999999999999999985589999999999999997754
Q ss_pred C-Chhhhc--------CCeEEEEEECcEEeCC
Q 008993 525 E-DFAAEV--------SASIEATYVSGVQAYP 547 (547)
Q Consensus 525 ~-~~~~~~--------~~~v~~v~v~G~~v~~ 547 (547)
. +..++. ..+|..||++|++||+
T Consensus 344 ~~~~~d~~g~~~~~~~~~~v~~t~v~G~~v~~ 375 (379)
T PRK12394 344 HVEFADIHGETLTGTHVLVPQMTIKSGEILYR 375 (379)
T ss_pred cceeccCCCCEEEeeeecceEEEEECCEEEEe
Confidence 4 323332 2378999999999874
No 57
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=99.95 E-value=4.6e-25 Score=230.56 Aligned_cols=161 Identities=17% Similarity=0.153 Sum_probs=102.2
Q ss_pred CCceEeecCCCC-hhHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLA-SGTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~-~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|..... -+.++.++..| +++.+||+++..+.+.+.. ..++.|.+.....+.++++.|...++|||
T Consensus 231 ~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SD 310 (447)
T cd01315 231 CRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSD 310 (447)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccCCCCceEECCCCCChHHHHHHHHHHhCCceeEEeCC
Confidence 477888876422 22334444555 6677889887655444321 11122222223456677889999999999
Q ss_pred CCCCCC--------ChHH----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCC
Q 008993 450 WPVADI--------NPLC----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 511 (547)
Q Consensus 450 ~~~~~~--------~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~G 511 (547)
+..... +.+. .+...+.. +....+++++++++++|.|||+++|+++++|+|++|
T Consensus 311 h~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g 382 (447)
T cd01315 311 HSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTE--------AVNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVG 382 (447)
T ss_pred CCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCC
Confidence 654221 1000 01111100 113457999999999999999999998778999999
Q ss_pred CcccEEEEcCCCC-C-Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 512 KIADFVILSTSSW-E-DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 512 k~ADlvv~d~d~~-~-~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
++|||+|+|.+.. . ....+ ...+|..||++|++||.
T Consensus 383 ~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~ti~~G~~v~~ 433 (447)
T cd01315 383 YDADFVVWDPEEEFTVDAEDLYYKNKISPYVGRTLKGRVHATILRGTVVYQ 433 (447)
T ss_pred CCCCEEEEcCCCCEEEcHHHccccCCCCCccCeEEeeeEEEEEECCEEEEE
Confidence 9999999997641 1 11111 14479999999999873
No 58
>PLN02795 allantoinase
Probab=99.95 E-value=4.8e-25 Score=230.92 Aligned_cols=164 Identities=16% Similarity=0.145 Sum_probs=106.5
Q ss_pred CCCceEeecCCC-C-hhHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeec
Q 008993 378 DQRFRIEHAQHL-A-SGTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALG 447 (547)
Q Consensus 378 ~~~~~i~H~~~~-~-~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~G 447 (547)
+.+.++.|.+.. . -+.++..++.| +++.+||+++..+.+.+.. ..++-|.......+.+.++.|...++|
T Consensus 285 g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~ 364 (505)
T PLN02795 285 GAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLS 364 (505)
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEe
Confidence 457888888764 2 23445556667 8889999998766554322 222333323334567788899999999
Q ss_pred CCCCCCCCC-------hHH-------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCc
Q 008993 448 SDWPVADIN-------PLC-------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKI 513 (547)
Q Consensus 448 TD~~~~~~~-------~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ 513 (547)
||+...... .+. ++...+...- ....+.+++++++++++|.|||+++|++ ++|+|++|++
T Consensus 365 sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~-----~~~~~~~l~l~~~v~~~s~~pA~~~gl~-~~G~l~~G~~ 438 (505)
T PLN02795 365 SDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATW-----TAGRAYGLTLEQLARWWSERPAKLAGLD-SKGAIAPGKD 438 (505)
T ss_pred cCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHH-----HHHHHcCCCHHHHHHHHHHHHHHHhCCC-CCCccCCCCc
Confidence 997653211 011 0001111000 0013556999999999999999999995 4799999999
Q ss_pred ccEEEEcCCCC-C---C--h---hh-h-------cCCeEEEEEECcEEeCC
Q 008993 514 ADFVILSTSSW-E---D--F---AA-E-------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 514 ADlvv~d~d~~-~---~--~---~~-~-------~~~~v~~v~v~G~~v~~ 547 (547)
|||+|+|.+-. . . . .. . ...+|..|+++|++||+
T Consensus 439 ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~~G~~l~g~v~~tiv~G~~v~~ 489 (505)
T PLN02795 439 ADIVVWDPEAEFVLDESYPIYHKHKSLSPYLGTKLSGKVIATFVRGNLVFL 489 (505)
T ss_pred cCEEEEcCCcceEECcchhhhhcCCCcCCCCCeEEEeEEEEEEECCEEEEE
Confidence 99999986531 1 0 0 10 1 15589999999999873
No 59
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=99.94 E-value=2.6e-25 Score=231.31 Aligned_cols=160 Identities=18% Similarity=0.188 Sum_probs=102.2
Q ss_pred CCceEeecCCCC-hhHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLA-SGTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~-~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|..... .+.++.+++.| +++.+||+++..+.+.+.. ..++-|.......+.+.++.|...+++||
T Consensus 230 ~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SD 309 (443)
T TIGR03178 230 CRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSD 309 (443)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCC
Confidence 467788877532 34455556666 5667799987655444322 11122221222345677889999999999
Q ss_pred CCCCCC------ChH---------HH-HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCc
Q 008993 450 WPVADI------NPL---------CA-IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKI 513 (547)
Q Consensus 450 ~~~~~~------~~~---------~~-~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ 513 (547)
+..... +.+ +. +..++.. ...+.+++++++++++|.|||+++|+++ +|+|++|+.
T Consensus 310 h~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~--------~~~~~~l~~~~~~~~~t~~pA~~~g~~~-~G~l~~G~~ 380 (443)
T TIGR03178 310 HSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDE--------AVQKRGLPLEDIARLMATNPAKRFGLAQ-KGRIAPGKD 380 (443)
T ss_pred CCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHH--------HHHhcCCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCc
Confidence 854321 110 00 1111100 1135579999999999999999999954 799999999
Q ss_pred ccEEEEcCC-CCC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 514 ADFVILSTS-SWE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 514 ADlvv~d~d-~~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
|||+|+|.+ ++. +...+. ..+|..|+++|++||.
T Consensus 381 Ad~vi~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~t~v~G~~v~~ 429 (443)
T TIGR03178 381 ADFVFVDPDESYTLTPDDLYYRHKVSPYVGRTIGGRVRATYLRGQCIYD 429 (443)
T ss_pred CCEEEEcCCCcEEEcHHHhhhcCCCCCcCCcEEeeEEEEEEECCEEEEE
Confidence 999999985 443 222111 4579999999999873
No 60
>PRK09060 dihydroorotase; Validated
Probab=99.94 E-value=1.6e-24 Score=224.52 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=102.4
Q ss_pred CCCceEeecCCCChhHHHHHH--hCCcEEEecCccccCChhH-HH------HhhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLASGTAARFG--DQGIVASMQPQHLLDDADS-AR------KKLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~--~~g~~~~~~p~~~~~~~~~-~~------~~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.++++.|... .+.++.++ +..+++.+||++...+.+. +. +..++-|.......+.+.++.|+..++||
T Consensus 227 ~~~lhi~h~st--~~~v~~i~~~~~~vt~ev~ph~l~l~~~~~~~~~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~s 304 (444)
T PRK09060 227 GRRIHVLHVST--AEEIDFLADHKDVATVEVTPHHLTLAAPECYERLGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGS 304 (444)
T ss_pred CCCEEEEeCCC--HHHHHHHHHhCCCeEEEeChHHhccCchhhcccCCceEEEeCCCCCHHHHHHHHHHHhCCCccEEec
Confidence 34778888885 45555443 3348899999887654433 22 12223332233345778889999999999
Q ss_pred CCCCCCCC--------------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcc
Q 008993 449 DWPVADIN--------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIA 514 (547)
Q Consensus 449 D~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~A 514 (547)
|+...... -.+.+...+.. ...+..++++++++++|.|||+++|+++ +|+|++|+.|
T Consensus 305 Dh~p~~~~~k~~~~~~~~~G~~g~e~~~~l~~~--------~v~~g~l~~~~~~~~~s~~pa~~~gl~~-~G~l~~G~~A 375 (444)
T PRK09060 305 DHAPHTLEEKAKPYPASPSGMTGVQTLVPIMLD--------HVNAGRLSLERFVDLTSAGPARIFGIAG-KGRIAVGYDA 375 (444)
T ss_pred CCCCCCHHHhcCCcccCCCCcccHHHHHHHHHH--------HHHcCCCCHHHHHHHHhHhHHHHhCCCC-CCcccCCCcC
Confidence 96542211 01111111111 1123459999999999999999999965 7999999999
Q ss_pred cEEEEcCCCCC--------------Chhhh-cCCeEEEEEECcEEeCC
Q 008993 515 DFVILSTSSWE--------------DFAAE-VSASIEATYVSGVQAYP 547 (547)
Q Consensus 515 Dlvv~d~d~~~--------------~~~~~-~~~~v~~v~v~G~~v~~ 547 (547)
||+|+|.+... +.... ...++..|+++|++||+
T Consensus 376 Dlvl~d~~~~~~v~~~~~~s~~~~sp~~g~~l~g~~~~tiv~G~~v~~ 423 (444)
T PRK09060 376 DFTIVDLKRRETITNEWIASRCGWTPYDGKEVTGWPVGTIVRGQRVMW 423 (444)
T ss_pred CEEEEcCCCCEEEChHHhcccCCCCCCCCCEEeeeEEEEEECCEEEEE
Confidence 99999976321 11111 14578899999999873
No 61
>PRK06846 putative deaminase; Validated
Probab=99.94 E-value=8.3e-25 Score=225.30 Aligned_cols=168 Identities=19% Similarity=0.160 Sum_probs=117.6
Q ss_pred eeEEecc-cHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC---ChhHHH----HHHhCCcEEEecCccccCChhHHHHh
Q 008993 350 VAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL---ASGTAA----RFGDQGIVASMQPQHLLDDADSARKK 421 (547)
Q Consensus 350 v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~---~~~~l~----~~~~~g~~~~~~p~~~~~~~~~~~~~ 421 (547)
+++|... .......++.+-+...+.+..+ +..+.|+.++ ++++++ ++++.|+.+..++..
T Consensus 222 v~~Hv~e~~~~~~~~~~~~~~~~~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~~----------- 289 (410)
T PRK06846 222 VDIHLHDTGPLGVATIKYLVETTEEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGISITSTVPI----------- 289 (410)
T ss_pred cEEEECCCCChhHHHHHHHHHHHHHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCCC-----------
Confidence 7888642 2122222233333444456555 8999999965 666644 799999888765330
Q ss_pred hChhhhhhhchHHHHHHHCCCeeeecCCCCC------CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 422 LGVDRAERESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 422 ~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
+ ++.+|+++|.++|+++++|||++. .+.|++.++..+..... +..+. ++.++++++|.+
T Consensus 290 -~-----~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~~~~~~~~~~~~~------~~~~~--~~~~~l~~~T~~- 354 (410)
T PRK06846 290 -G-----RLHMPIPLLHDKGVKVSLGTDSVIDHWSPFGTGDMLEKANLLAELYR------WSDER--SLSRSLALATGG- 354 (410)
T ss_pred -C-----CCCCCHHHHHhCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHhc------CCCHH--HHHHHHHHHcCC-
Confidence 1 556789999999999999999752 24578888876654322 11222 456899999988
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~ 546 (547)
|+.+++++.+|+|+|||.|||+++|.+... .+.. ..++..||++|++||
T Consensus 355 a~~l~~~~~~G~l~~G~~ADlvlld~~~~~~~~~~--~~~v~~v~~~G~~v~ 404 (410)
T PRK06846 355 VLPLNDEGERVWPKVGDEASFVLVDASCSAEAVAR--QSPRTAVFHKGQLVA 404 (410)
T ss_pred ccccccCCCccCCCCCCcccEEEEeCCChHHHHHh--cCCceEEEECCEEEe
Confidence 566888777899999999999999986532 2222 448999999999987
No 62
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.94 E-value=9.5e-25 Score=221.49 Aligned_cols=120 Identities=17% Similarity=0.096 Sum_probs=91.0
Q ss_pred hhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC------CChHHHHHHHHcccC-CCCCCCCCCCCCCCHHHH
Q 008993 415 ADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTAMKRIP-PGWDNAWIPSERISLTDA 487 (547)
Q Consensus 415 ~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~a 487 (547)
..+.+.|+.++.. ..-..|.+.|+.-.++||+...+ ...|+....+...+- ..++ -.....++.+++
T Consensus 331 ~afa~srir~~ti----aaed~l~d~G~~s~~~SDs~~mgr~ge~~~r~~q~a~k~~~~~g~l~~~--~~~~dnl~v~eA 404 (568)
T PRK13985 331 VQFADSRIRPQTI----AAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEE--KGDNDNFRIKRY 404 (568)
T ss_pred hhhhhhhcccccc----ccCchhhhCCcEEEEeccchhhCcccceeeehHHHHHHHHHhcCCCCCc--cccccccCHHHH
Confidence 3344444444333 23346788999999999987543 468888887776322 1111 112457899999
Q ss_pred HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+++|.|||+++|+++++|+|+|||.||||||+.+++.. ++..||++|+++|.
T Consensus 405 L~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~~-------~pe~vi~~G~iv~~ 457 (568)
T PRK13985 405 LSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGV-------KPNMIIKGGFIALS 457 (568)
T ss_pred HHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCCC-------ChheEEECCEEEEc
Confidence 999999999999999999999999999999999998864 77899999999984
No 63
>PRK13404 dihydropyrimidinase; Provisional
Probab=99.94 E-value=4.9e-25 Score=230.00 Aligned_cols=395 Identities=19% Similarity=0.191 Sum_probs=206.7
Q ss_pred ccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
++++|+|++|+++.+. ..++|+|+||||.+|++.. +.+.++||+.|++|+|||||+|+|+..++.
T Consensus 4 ~d~~i~~~~v~~~~~~--~~~~i~I~dg~I~~i~~~~------~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~------- 68 (477)
T PRK13404 4 FDLVIRGGTVVTATDT--FQADIGIRGGRIAALGEGL------GPGAREIDATGRLVLPGGVDSHCHIDQPSG------- 68 (477)
T ss_pred CcEEEECCEEEcCCCc--eEEEEEEECCEEEEecCCC------CCCCeEEECCCCEEecCEEEeEEcCCcccc-------
Confidence 4689999999997653 4579999999999998642 345689999999999999999999975421
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC-CCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG-ITN 203 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g-~~~ 203 (547)
.+....+++....+++.. .+.++++.-.... .....+ .+++..- ..
T Consensus 69 ~~~~~~e~~~~~s~aa~~-gGvTtv~~~~~~~-----~~~~~~--------------------------~~l~~~~~~~- 115 (477)
T PRK13404 69 DGIMMADDFYTGTVSAAF-GGTTTVIPFAAQH-----RGQSLR--------------------------EAVEDYHRRA- 115 (477)
T ss_pred CCccccchHHHHHHHHHc-CCccEEEEccCCC-----CCCCHH--------------------------HHHHHHHHHh-
Confidence 111223555555554443 2222211110000 000001 1111000 00
Q ss_pred CCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHH
Q 008993 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (547)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 283 (547)
.+..++ +. .....+.....+. ....+..+.+.|+.+++-+..+.. ..-+.+++
T Consensus 116 -----~~~~~v------------d~---~~~~~~~~~~~~~----~~~~v~~l~~~G~~~iKi~~~~~~---~~~~~~~l 168 (477)
T PRK13404 116 -----AGKAVI------------DY---AFHLIVADPTEEV----LTEELPALIAQGYTSFKVFMTYDD---LKLDDRQI 168 (477)
T ss_pred -----ccCcEE------------EE---EEEEEecCCChhh----HHHHHHHHHHcCCCEEEEEecCCC---CCCCHHHH
Confidence 000000 00 0000111111221 222355667789888886532111 11233456
Q ss_pred HHHHHHHhhCCCCeeEEEEccCccch-hhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhceeEEecc---cHH
Q 008993 284 ADVYQWASYSEKMKIRVCLFFPLETW-SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIG---DRA 359 (547)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~H~~~---~~~ 359 (547)
.++++.+++. ...+..++..+.. ....+.....+... ...|..+ ..+
T Consensus 169 ~~~~~~a~~~---g~~V~~Hae~~~~i~~~~~~~~~~G~~~--------------------------~~~~~~~rp~~~E 219 (477)
T PRK13404 169 LDVLAVARRH---GAMVMVHAENHDMIAWLTKRLLAAGLTA--------------------------PKYHAISRPMLAE 219 (477)
T ss_pred HHHHHHHHhc---CCEEEEEeCCHHHHHHHHHHHHHCCCcc--------------------------hhhccccCCHHHH
Confidence 6666666543 3334444433322 11111111111100 1111111 111
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH---------hhChhhh
Q 008993 360 NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK---------KLGVDRA 427 (547)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~---------~~g~~~~ 427 (547)
...+...+ .+.+.. +.+.++.|.+.-.. +.+..+++.| +++.+||+++..+.+.+.. ..++-|.
T Consensus 220 ~~~v~~~~-~la~~~---g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~ 295 (477)
T PRK13404 220 REATHRAI-ALAELV---DVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGMEGAKYICSPPPRD 295 (477)
T ss_pred HHHHHHHH-HHHHHh---CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccccCCceEECCCCCC
Confidence 11112222 122222 33678888874322 3344455555 6778999988766554422 1223333
Q ss_pred hhhchHHHHHHHCCCeeeecCCCCCCCCC------------hHHHHHHHHcccCCCCCCC---CCCCCCCCHHHHHHHHH
Q 008993 428 ERESYLFQSLLANNALLALGSDWPVADIN------------PLCAIRTAMKRIPPGWDNA---WIPSERISLTDALIAHT 492 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~------------~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~al~~aT 492 (547)
......+...++.|...+++||+.....+ ++.....++.......... .....+++++++++++|
T Consensus 296 ~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t 375 (477)
T PRK13404 296 KANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTS 375 (477)
T ss_pred hHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34445678888999999999997654311 1110000000000000000 11244699999999999
Q ss_pred HHHHHHcccCCCcccccCCCcccEEEEcCCCCC--Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 493 LSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 493 ~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
.|||++||+.+++|+|++|+.|||+++|.+... +...+ ...+|..||++|++||+
T Consensus 376 ~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~vv~~ 445 (477)
T PRK13404 376 TNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPYEGMRVTGWPVTVLSRGRVVVE 445 (477)
T ss_pred HHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcccceEEeeeEEEEEECCEEEEE
Confidence 999999999655899999999999999976321 11111 15578899999999873
No 64
>PRK09059 dihydroorotase; Validated
Probab=99.94 E-value=3.5e-24 Score=220.38 Aligned_cols=163 Identities=18% Similarity=0.224 Sum_probs=102.6
Q ss_pred CCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.++.|.+.... +.+++.++.| ++..+||+++..+.+.+.. ..+|-|.+.....+.+.+..|...+++|
T Consensus 231 ~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~s 310 (429)
T PRK09059 231 RGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVS 310 (429)
T ss_pred CCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEe
Confidence 34778888876443 3344455555 7788999998766554432 2222232222334566677888888999
Q ss_pred CCCCCCCC----hHH-------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEE
Q 008993 449 DWPVADIN----PLC-------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFV 517 (547)
Q Consensus 449 D~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlv 517 (547)
|+..-... ++. ++..++.... ....+.++++++++++.|.|||+++|++ .|+|++|+.|||+
T Consensus 311 Dh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~-----~~v~~~~l~l~~~~~~~s~nPA~~~gl~--~G~l~~G~~ADlv 383 (429)
T PRK09059 311 SHDPQDVDTKRLPFSEAAAGAIGLETLLAAAL-----RLYHNGEVPLLRLIEALSTRPAEIFGLP--AGTLKPGAPADII 383 (429)
T ss_pred CCCCCCHHHCcCChhhCCCCcccHHHHHHHHH-----HHHHcCCCCHHHHHHHHhHHHHHHhCCC--cCcccCCCcCCEE
Confidence 96532100 110 1111111000 0113456899999999999999999995 5999999999999
Q ss_pred EEcCCCCC--Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 518 ILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 518 v~d~d~~~--~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
++|.+-.. ....+ ...+|..|+++|++||+
T Consensus 384 l~d~~~~~~v~~~~~~s~~~~sPf~G~~l~G~v~~ti~~G~~v~~ 428 (429)
T PRK09059 384 VIDLDEPWVVDPEDLKSRSKNTPFEEARFQGRVVRTIVAGKTVYE 428 (429)
T ss_pred EECCCCCEEECcccCccCCCCCCCCCCEEeeEEEEEEECCEEEee
Confidence 99965211 11111 16699999999999985
No 65
>PRK09061 D-glutamate deacylase; Validated
Probab=99.94 E-value=3.6e-24 Score=224.58 Aligned_cols=67 Identities=34% Similarity=0.546 Sum_probs=56.3
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~ 115 (547)
.+++++|+|++|+|+.+.....++|+|+||||++|++.. +.+.++||++|++|+|||||+|+|....
T Consensus 17 ~~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~------~~~~~viD~~g~~v~PG~ID~H~H~~~~ 83 (509)
T PRK09061 17 APYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAA------IEGDRTIDATGLVVAPGFIDLHAHGQSV 83 (509)
T ss_pred ccCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCC------CCCCeEEeCCCCEEecCeEeeeeCCCCC
Confidence 456789999999998776545579999999999999742 2356899999999999999999998654
No 66
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.94 E-value=7.6e-25 Score=225.40 Aligned_cols=120 Identities=18% Similarity=0.168 Sum_probs=86.5
Q ss_pred ChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC------CChHHHHHHHHcccCC-CCCCCCCCCCCCCHHH
Q 008993 414 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTAMKRIPP-GWDNAWIPSERISLTD 486 (547)
Q Consensus 414 ~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 486 (547)
+..+.+.|+.++.. ..-..|.+.|+..+++||+...+ ...|+....+...... .....+..++.++.+
T Consensus 329 d~~~a~~r~r~~t~----~ae~~l~d~G~~~~~~sDs~~mgr~~~~~~r~~q~a~k~~~~~g~~~~~~~~~~~~rl~r~- 403 (567)
T TIGR01792 329 DVAFAESRIRKETI----AAEDVLQDMGAISMISSDSQAMGRIGEVVTRCWQTADKMKKQRGPLPGDSPGNDNNRVKRY- 403 (567)
T ss_pred cchhhhhhccceec----cccchhhhCCcEEEecCCchhhCcccceeechHHHHHHHHHhcCCCcccccCChhhhHHHH-
Confidence 34445555555443 33456789999999999987442 3566666666443221 111112334555555
Q ss_pred HHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 487 ALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 487 al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
|+++|.|||+++|+++++|+|++||.||||||+.++|.. ++..||++|+++|
T Consensus 404 -L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f~~-------~p~~v~~~G~i~~ 455 (567)
T TIGR01792 404 -VAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFFGV-------KPDMVLKGGLIAW 455 (567)
T ss_pred -HHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcccCC-------ChheEEECCEEEE
Confidence 999999999999999999999999999999999999863 6779999999987
No 67
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.93 E-value=1.8e-24 Score=218.13 Aligned_cols=91 Identities=23% Similarity=0.262 Sum_probs=69.0
Q ss_pred HHHHHHHCCCe---eeecCCCCCCC--C---------------ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHH
Q 008993 433 LFQSLLANNAL---LALGSDWPVAD--I---------------NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHT 492 (547)
Q Consensus 433 ~~~~l~~~Gv~---~~~GTD~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT 492 (547)
.++.++++|++ +++|||+..+. . +++..+..++ ...++|++++|+++|
T Consensus 267 ~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv------------~~g~ls~~eal~~~T 334 (389)
T TIGR01975 267 GIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAV------------KDGDVPLEKALRVIT 334 (389)
T ss_pred HHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHH------------HhCCCCHHHHHHHHH
Confidence 46899999997 49999975321 1 1234444332 234589999999999
Q ss_pred HHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 493 LSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 493 ~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
.|||++||++ ++|+|++|+.|||++++.+. ++..||.+|++++
T Consensus 335 ~npA~~Lgl~-~~G~I~~G~~ADlvild~~~----------~i~~v~~~G~~v~ 377 (389)
T TIGR01975 335 SNVAGVLNLT-GKGEISPGNDADLVVLDPDL----------RIHSVIARGKLMV 377 (389)
T ss_pred HHHHHHhCCC-CCCeECCCCcCCEEEEcCCC----------CEEEEEECCEEEE
Confidence 9999999998 48999999999999999872 5666667766653
No 68
>PRK02382 dihydroorotase; Provisional
Probab=99.93 E-value=8.3e-24 Score=219.74 Aligned_cols=154 Identities=19% Similarity=0.192 Sum_probs=103.0
Q ss_pred CCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 379 QRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 379 ~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
.+.++.|... .+.++.+++..++..+||+++..+.+.+.. ..++-|.......+.+.++.|...+++||+..
T Consensus 228 ~~~hi~h~ss--~~~~~~i~~~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P 305 (443)
T PRK02382 228 ARIHIAHIST--PEGVDAARREGITCEVTPHHLFLSRRDWERLGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDHAP 305 (443)
T ss_pred CCEEEEECCC--HHHHHHHHHCCcEEEEchhhhhcCHHHHhccCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 4677777664 455665555568999999988766554422 12233322222345566778999999999755
Q ss_pred CCCC------------------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcc
Q 008993 453 ADIN------------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIA 514 (547)
Q Consensus 453 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~A 514 (547)
.+.. .+.-+... ..+.+++++++++++|.|||+++|+++ +|+|++|+.|
T Consensus 306 ~~~~~K~~~~~~~~~G~~g~e~~~~~~~~~------------~~~~~~~l~~~~~~~t~~pA~~~g~~~-~G~l~~G~~A 372 (443)
T PRK02382 306 HTREEKDADIWDAPSGVPGVETMLPLLLAA------------VRKNRLPLERVRDVTAANPARIFGLDG-KGRIAEGYDA 372 (443)
T ss_pred CCHHHhcCChhhCCCCcccHHHHHHHHHHH------------HHcCCCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCcC
Confidence 3210 11111111 134579999999999999999999974 7999999999
Q ss_pred cEEEEcCCCCC--Chhhhc------------CCeEEEEEECcEEeCC
Q 008993 515 DFVILSTSSWE--DFAAEV------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 515 Dlvv~d~d~~~--~~~~~~------------~~~v~~v~v~G~~v~~ 547 (547)
||+++|.+... ....+. ...+..|+++|+++|+
T Consensus 373 D~vi~d~~~~~~~~~~~~~s~~~~sp~~g~~~~~v~~tiv~G~~v~~ 419 (443)
T PRK02382 373 DLVLVDPDAAREIRGDDLHSKAGWTPFEGMEGVFPELTMVRGTVVWD 419 (443)
T ss_pred CEEEEcCCCcEEEcHHHhcccCCCCCcCCCEeceEEEEEECCEEEEE
Confidence 99999975322 111111 2377899999999874
No 69
>PRK09237 dihydroorotase; Provisional
Probab=99.93 E-value=5.9e-24 Score=217.15 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=95.1
Q ss_pred ceEeecCCCCh-----------hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC-eeeecC
Q 008993 381 FRIEHAQHLAS-----------GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGS 448 (547)
Q Consensus 381 ~~i~H~~~~~~-----------~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv-~~~~GT 448 (547)
..+.||...+. +.+....+.|+.+.+...... ....+.+.+.++|+ +.+++|
T Consensus 206 ~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~~----------------~~~~~~~~l~~~g~~~~~l~t 269 (380)
T PRK09237 206 DILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGTAS----------------FSFKVAEAAIAAGILPDTIST 269 (380)
T ss_pred CEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCCCc----------------ccHHHHHHHHHCCCCceEEEC
Confidence 36789997776 456666778888775532211 11123456778896 568999
Q ss_pred CCCCCC--CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-
Q 008993 449 DWPVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE- 525 (547)
Q Consensus 449 D~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~- 525 (547)
|....+ ..+...+...+.+. .+.+++++++++++|.|||+++|++ ++|+|++||.|||++++.+...
T Consensus 270 D~~~~~~~~~~~~~l~~~~~~~---------~~~g~~~~~al~~aT~n~A~~lgl~-~~G~l~~G~~ADlvv~~~~~~~~ 339 (380)
T PRK09237 270 DIYCRNRINGPVYSLATVMSKF---------LALGMPLEEVIAAVTKNAADALRLP-ELGRLQVGSDADLTLFTLKDGPF 339 (380)
T ss_pred CCCCCCcccchHhHHHHHHHHH---------HHhCCCHHHHHHHHHHHHHHHcCCC-CCCcCCCCCcCCEEEEeCCCCCc
Confidence 965432 12222233333221 1247999999999999999999995 4899999999999999854222
Q ss_pred Chhhhc--------CCeEEEEEECcEEeC
Q 008993 526 DFAAEV--------SASIEATYVSGVQAY 546 (547)
Q Consensus 526 ~~~~~~--------~~~v~~v~v~G~~v~ 546 (547)
...+.. ..+|+.||++|++||
T Consensus 340 ~~~d~~~~~~~~~~~~~~~~~~v~G~~~~ 368 (380)
T PRK09237 340 TLTDSEGDSLIGERLLTPLATVRGGKVVL 368 (380)
T ss_pred cccCCCCCEEEecCCCcceEEEECCEEEE
Confidence 222221 469999999999996
No 70
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.93 E-value=2.7e-24 Score=219.19 Aligned_cols=102 Identities=21% Similarity=0.189 Sum_probs=72.7
Q ss_pred HHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHH-----------HHHHHHHHHHHHcccC
Q 008993 434 FQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTD-----------ALIAHTLSAARACFLE 502 (547)
Q Consensus 434 ~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------al~~aT~n~A~~lgl~ 502 (547)
-..|.+.|+.-.++||+...+ .+++.+....+.... ...+...|+.++ .|+++|.|||+++|++
T Consensus 346 e~~l~d~g~~s~~~sds~~mg-r~~e~i~r~~q~a~~----~~~~~g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~ 420 (569)
T PRK13308 346 EDVLHDIGAISMLGSDSQGMG-RIAEVIARTWQLASK----MKDQRGPLPEDRGTFADNARIKRYIAKYTINPAITFGID 420 (569)
T ss_pred CchhhcCCcEEEEecchHHHh-HHHHHHHHHHHHHHH----HhhcCCCCCcccccCCchhhhhHHHHHHhHHHHHHcCCC
Confidence 346788999999999986543 222222222221110 001122344433 6999999999999999
Q ss_pred CCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 503 NDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+++|+|++||.||||+|+.++|.. ++..||++|+++|.
T Consensus 421 ~~vGsLe~Gk~ADLVv~d~d~fgv-------~p~~ti~~G~iv~~ 458 (569)
T PRK13308 421 DHIGSLEPGKLADIVLWRPAFFGI-------KPELVIKGGFPAWA 458 (569)
T ss_pred CCceeeCCCCcCCEEEECCcccCC-------CeeEEEECCEEEEe
Confidence 999999999999999999998754 68899999999873
No 71
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.93 E-value=7.3e-24 Score=215.96 Aligned_cols=117 Identities=18% Similarity=0.144 Sum_probs=86.1
Q ss_pred hhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC------CChHHHHHHHHcccC-CCCCCCCCCCCCCCHHHH
Q 008993 415 ADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTAMKRIP-PGWDNAWIPSERISLTDA 487 (547)
Q Consensus 415 ~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~a 487 (547)
..+.+.|+.++.. ..-..|.+.|+..+++||+...+ ...|+....+....- ..+ ...+.+...+
T Consensus 331 ~~fa~srir~~ti----~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r~~q~a~k~~~~~g~~~~-----~~~~~~n~r~ 401 (567)
T cd00375 331 VAFAESRIRAETI----AAEDVLHDLGAISIMSSDSQAMGRVGEVILRTWQTAHKMKAQRGPLPE-----DSGDADNFRV 401 (567)
T ss_pred hhhhhhhccchhh----ccchhhhccCcEEEEccchhhcCccceeeechHHHHHHHHHhcCCCCc-----ccccCchHHH
Confidence 3344445544433 33456788999999999986432 457777777766322 111 1123455555
Q ss_pred ---HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 488 ---LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 488 ---l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+++|.|||+++|+++++|+|++||.||||||+.+++.. ++..||++|+++|.
T Consensus 402 ~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f~~-------~p~~vi~~G~iv~~ 457 (567)
T cd00375 402 KRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFFGV-------KPEMVLKGGFIAYA 457 (567)
T ss_pred HHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcccCC-------CeeEEEECCEEEEe
Confidence 999999999999999999999999999999999998753 78899999999984
No 72
>PRK08044 allantoinase; Provisional
Probab=99.93 E-value=1e-23 Score=218.60 Aligned_cols=168 Identities=20% Similarity=0.149 Sum_probs=106.4
Q ss_pred CCceEeecCCC-ChhHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHL-ASGTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~-~~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|.... .-+.+...++.| ++..+||+++..+.+.+.. ..++-|.+.....+.+.+..|...+++||
T Consensus 236 ~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sD 315 (449)
T PRK08044 236 CRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSD 315 (449)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcC
Confidence 37788888842 234455555665 7788999998866665432 12233332334556777789999999999
Q ss_pred CCCCCCC----hHHHHHHHHcccCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC
Q 008993 450 WPVADIN----PLCAIRTAMKRIPPGWDN---AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 522 (547)
Q Consensus 450 ~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d 522 (547)
+...... ++......+......... ......+++++++++++|.|||++||+++ +|+|++|++|||+++|.+
T Consensus 316 H~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~lgl~~-~G~i~~G~~ADlvi~d~~ 394 (449)
T PRK08044 316 HSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDADFVFIQPN 394 (449)
T ss_pred CCCCChHHccCChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCC-CCcCCCCCccCEEEECCC
Confidence 7553210 111000000000000000 01135579999999999999999999965 699999999999999976
Q ss_pred CC-C-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 523 SW-E-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 523 ~~-~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
-. . ....+. ..+|..|+++|++||+
T Consensus 395 ~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~t~~~G~~v~~ 434 (449)
T PRK08044 395 SSYVLKNEDLEYRHKVSPYVGRTIGARITKTILRGDVIYD 434 (449)
T ss_pred CcEEECHHHccccCCCCCCCCCEEeeeEEEEEECCEEEEE
Confidence 32 1 111111 5679999999999874
No 73
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.93 E-value=9.5e-24 Score=213.89 Aligned_cols=354 Identities=22% Similarity=0.308 Sum_probs=208.0
Q ss_pred cEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccC
Q 008993 46 DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLR 125 (547)
Q Consensus 46 ~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~ 125 (547)
+++|+|+++++.+. ...++|+|++|+|.+|++.... ..+.++||++|.+|+||+||.|+|+..++.
T Consensus 2 ~~lIk~~~iv~~~~--~~~~di~i~~g~I~~Ig~~l~~----~~~~~iiD~~g~~v~PG~ID~HVH~repg~-------- 67 (430)
T COG0044 2 DLLIKNARVVDPGE--DEVADILIKDGKIAAIGKNLEP----TSGAEIIDAKGLLVLPGLVDLHVHFREPGF-------- 67 (430)
T ss_pred cEEEeccEEEcCCC--ceEecEEEECCEEEEeccCCCC----CCCCcEEECCCCEEccCeeEEEEecCCCCc--------
Confidence 67999999999822 3667999999999999976332 136799999999999999999999976643
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCC
Q 008993 126 GVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLS 205 (547)
Q Consensus 126 g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~ 205 (547)
+.
T Consensus 68 --~~---------------------------------------------------------------------------- 69 (430)
T COG0044 68 --EH---------------------------------------------------------------------------- 69 (430)
T ss_pred --ch----------------------------------------------------------------------------
Confidence 11
Q ss_pred CCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHH
Q 008993 206 EDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFAD 285 (547)
Q Consensus 206 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (547)
++.+..+.+.+...|+|++.+|.+..|... +.+.+..
T Consensus 70 ----------------------------------------ke~~~tgs~AAa~GG~Ttv~dmPnt~P~~~---~~~~~~~ 106 (430)
T COG0044 70 ----------------------------------------KETFETGSRAAAAGGVTTVVDMPNTKPPID---TAEALED 106 (430)
T ss_pred ----------------------------------------hhhHHHHHHHHHcCCceEEEECCCCCCCCC---CHHHHHH
Confidence 122444566777888888888887665543 3333333
Q ss_pred HHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcC-cchhhhhc-----------eeEE
Q 008993 286 VYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLG-SNSALFHE-----------VAIH 353 (547)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~-----------v~~H 353 (547)
.++...++.-..+..+.......... .+.... ....|.+.|.+.+-. .....+.+ +.+|
T Consensus 107 ~~~~a~~~~~vd~~~~~~it~~~~~~-~~~~~~--------~~~~g~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 177 (430)
T COG0044 107 KLERAKGKSVVDYAFYGGLTKGNLGK-LELTER--------GVEAGFKGFMDDSTGALDDDVLEEALEYAAELGALILVH 177 (430)
T ss_pred HHHHhhccceeEEEEEEEEeccccch-hhhhhh--------hhccceEEEecCCcCcCCHHHHHHHHHHHHhcCCeEEEe
Confidence 33333333322233332222221110 011110 113456777766632 22222211 6677
Q ss_pred ecccHHHH---------------------HHHHHHHH---HHHhcCCCCCCceEeecCCCCh-hHHHHHHhCC--cEEEe
Q 008993 354 AIGDRAND---------------------LVLDMYKS---VVVTTGKRDQRFRIEHAQHLAS-GTAARFGDQG--IVASM 406 (547)
Q Consensus 354 ~~~~~~~~---------------------~~~~~~~~---~~~~~~~~~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~ 406 (547)
+..+.-+. ....+++. +.... +.+.++.|...... +.++..+..| ++..+
T Consensus 178 ~Ed~~~~~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~---g~~vhi~HiSt~~sv~li~~ak~~g~~vt~Ev 254 (430)
T COG0044 178 AEDDDLIAEGVMNEGLRAPELGLAGRPPIAEASAIARDLELARAT---GARVHICHISTKESVELIRAAKAEGIRVTAEV 254 (430)
T ss_pred cCChhHhhhHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHh---CCcEEEEEcCCHHHHHHHHHHhhcCCceEEee
Confidence 64321110 00111111 11122 24777777765433 2233444443 77899
Q ss_pred cCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCCh----HHHHHHHHcccCCCCC--C
Q 008993 407 QPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSDWPVADINP----LCAIRTAMKRIPPGWD--N 474 (547)
Q Consensus 407 ~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~----~~~~~~~~~~~~~~~~--~ 474 (547)
||+++..+.+.+.. ..+|-|.+.....+.+.+..|....++||+..-..+. +......+........ .
T Consensus 255 tphHL~l~~~~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l 334 (430)
T COG0044 255 TPHHLLLDEEDIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLL 334 (430)
T ss_pred cchheEccHhHhhccCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHH
Confidence 99998866544433 3334343233334667788999999999975332110 1110000000000000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCC-CC-Chhhhc-------------CCeEEEEE
Q 008993 475 AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS-WE-DFAAEV-------------SASIEATY 539 (547)
Q Consensus 475 ~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~-~~-~~~~~~-------------~~~v~~v~ 539 (547)
.+..+..+|+.+.+++.|.|||+++|++. .|.|++|+.|||+|+|.+- +. ..+.+. ..+|.+|+
T Consensus 335 ~lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf~G~~~~g~v~~Ti 413 (430)
T COG0044 335 TLVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPFEGFELKGRVVATI 413 (430)
T ss_pred HHHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCcCCCEEeeeEEEEE
Confidence 02346679999999999999999999998 7889999999999999773 22 112221 66999999
Q ss_pred ECcEEeCC
Q 008993 540 VSGVQAYP 547 (547)
Q Consensus 540 v~G~~v~~ 547 (547)
++|+++|.
T Consensus 414 ~rG~~v~~ 421 (430)
T COG0044 414 LRGKVVYE 421 (430)
T ss_pred ECCEEEEE
Confidence 99999873
No 74
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.93 E-value=1.5e-23 Score=215.17 Aligned_cols=159 Identities=21% Similarity=0.207 Sum_probs=100.6
Q ss_pred eeEEec-ccHHHHHHHHHHHHHHHhcCCCCCCceEeecCC---CChhHHHHHHhCCcEEEec-CccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH---LASGTAARFGDQGIVASMQ-PQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~---~~~~~l~~~~~~g~~~~~~-p~~~~~~~~~~~~~~g~ 424 (547)
+++|.. +.... +.+.+++...|....+....|+.+ ..++.++.+ +.|..+.+. +.......
T Consensus 193 i~vH~~~~~~~l----~~v~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~~~-~~G~~~~v~~~~~~~~~~--------- 258 (388)
T PRK10657 193 VHVHMGDGKKGL----QPLFELLENTDIPISQFLPTHVNRNEPLFEQALEFA-KKGGVIDLTTSDPDFLGE--------- 258 (388)
T ss_pred EEEEeCCchHHH----HHHHHHHHhcCCCcceeeCcccCCCHHHHHHHHHHH-HcCCeEEEecCCCccccc---------
Confidence 677765 23333 333233344465555656667665 333434444 456555322 22111000
Q ss_pred hhhhhhchHHHHHHHCCC---eeeecCCCCCCC--C---------------ChHHHHHHHHcccCCCCCCCCCCCCCCCH
Q 008993 425 DRAERESYLFQSLLANNA---LLALGSDWPVAD--I---------------NPLCAIRTAMKRIPPGWDNAWIPSERISL 484 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv---~~~~GTD~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 484 (547)
... .....++.++++|+ ++.++||+.... . .++..+..++ ...++|+
T Consensus 259 ~~~-~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~------------~~~gis~ 325 (388)
T PRK10657 259 GEV-APAEALKRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELV------------KDEGLPL 325 (388)
T ss_pred Ccc-CHHHHHHHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHH------------HhcCCCH
Confidence 000 12245788999998 789999963221 1 1344444332 2457999
Q ss_pred HHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 485 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 485 ~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
+++++++|.|||+.+|+++ +|+|++|+.|||++++.+. ++..||++|++|+
T Consensus 326 ~~~l~~aT~npA~~lg~~~-~G~l~~G~~AD~vv~~~~~----------~~~~~~~~G~~v~ 376 (388)
T PRK10657 326 EDALKPLTSNVARFLKLNG-KGEILPGKDADLLVLDDDL----------RIEQVIAKGKLMV 376 (388)
T ss_pred HHHHHHHHHHHHHHhCCCC-CCccCCCCccCEEEECCCC----------CEEEEEECCEEEE
Confidence 9999999999999999987 8999999999999999332 7899999999886
No 75
>PLN02303 urease
Probab=99.93 E-value=7.9e-24 Score=222.48 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=90.5
Q ss_pred ChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC------CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHH
Q 008993 414 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDA 487 (547)
Q Consensus 414 ~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 487 (547)
+..+.+.|+.++.. ..-..|.+.|+..+++||+...+ ...|+....+..... ............+.+++
T Consensus 599 dvafa~srir~~ti----aaed~l~d~G~~s~~~SDs~amgr~ge~i~r~~q~A~k~~~~~g-~l~~~~~~~dn~rv~~a 673 (837)
T PLN02303 599 DVAFAESRIRAETI----AAEDILHDMGAISIISSDSQAMGRIGEVITRTWQTAHKMKSQRG-ALEPRGADNDNFRIKRY 673 (837)
T ss_pred hhhhhhhhccchhh----ccchhhhccCCEEEEeccchhhCcccceeeehHHHHHHHHHhcC-CCCCccccccccCHHHH
Confidence 34445555544443 33456788999999999987543 457887777744321 10001112356788999
Q ss_pred HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+++|+|||+++|+++++|||++||.||||||+.++|. .++..||++|++||.
T Consensus 674 L~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~fg-------~~~~~vi~~G~ivy~ 726 (837)
T PLN02303 674 IAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFG-------AKPEMVIKGGQIAWA 726 (837)
T ss_pred HHHHhHHHHHHCCcccCceeeCCCcccCEEEecccccC-------CCeeEEEECCEEEEc
Confidence 99999999999999999999999999999999998875 378999999999984
No 76
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.92 E-value=7.4e-24 Score=204.90 Aligned_cols=366 Identities=19% Similarity=0.231 Sum_probs=193.8
Q ss_pred EEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccCC
Q 008993 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (547)
Q Consensus 47 ~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~g 126 (547)
.+|+|++||++.+.. ..+.|+|+||+|.+|.+ .+. |...++||.+|.+|+|||||.|+|...+...++
T Consensus 2 ~~~~~~~i~t~~~~~-~~~~v~i~dg~I~~i~~-~~~----p~~~e~id~~G~~l~PGfID~hihG~gG~~~~D------ 69 (380)
T COG1820 2 YALKNGRIFTGHGVL-DGGAVVIEDGKIEAVVP-AEL----PADAEIIDLKGALLVPGFIDLHIHGGGGADFMD------ 69 (380)
T ss_pred ceeeccEEEcCcceE-ECcEEEEcCCEEEEEec-CcC----CCcceeecCCCCEecccEEEEeecCcCcccccC------
Confidence 468999999998764 56699999999999998 222 678899999999999999999999988865443
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCC
Q 008993 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (547)
Q Consensus 127 ~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 206 (547)
..+.+. +.++.++..+.+.++|+.- .+ . .+...+.+.. .+.+....
T Consensus 70 ~~~~~~-l~~i~~~~~~~GtTsfLpT------~i--T-~~~e~i~~al----------------~~~~e~~~-------- 115 (380)
T COG1820 70 AGSVET-LETMAEAHLRHGTTSFLPT------LI--T-ASLEKIKAAL----------------RAIREAIA-------- 115 (380)
T ss_pred ccCHHH-HHHHHHHhhhcCeeeeeee------cc--c-CCHHHHHHHH----------------HHHHHHHh--------
Confidence 122222 2233333333333322221 11 0 0111121110 00000000
Q ss_pred CCCCCeEeeCCCCCcCEEEhhhHHH-Hh------cccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccc
Q 008993 207 DPNGGTIMKTSSGEPTGLLIDAAMK-LI------LPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (547)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 279 (547)
..+..+ .|...|++.- .- ..++..++++++.. ..+.. ...++.+.-.+-
T Consensus 116 -~~ga~i--------lGiHLEGP~ls~~kkGAh~~~~ir~~~~~~~~~----~~~~a-~g~i~~vTlAPE---------- 171 (380)
T COG1820 116 -KGGAQI--------LGIHLEGPFLSPEKKGAHNPEYIRPPDPEELEQ----LIAAA-DGLIKLVTLAPE---------- 171 (380)
T ss_pred -ccCCce--------EEEEeecCccCHhhccCCCHHHhCCCCHHHHHH----HHhhc-cCceEEEEECCC----------
Confidence 001011 1333332210 00 01122344333222 12211 113444444431
Q ss_pred hhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhceeEEecccHH
Q 008993 280 WEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRA 359 (547)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~H~~~~~~ 359 (547)
.+...+..+.+.+. .+.+.......++++....+.......+..+ .++.-+....++-..+.+..-
T Consensus 172 ~~~~~e~i~~l~~~---giivs~GHS~Atye~~~~a~~~Ga~~~THlf--NaMs~l~hREPGvvGA~L~~~--------- 237 (380)
T COG1820 172 LDGTKELIRLLANA---GIVVSIGHSNATYEQARAAFEAGATFVTHLF--NAMSGLHHREPGVVGAALDNP--------- 237 (380)
T ss_pred CCCCHHHHHHHHhC---CeEEEecCccccHHHHHHHHHhCccEEEeec--cCCCCCCCCCCcccceeecCC---------
Confidence 11245777777776 4777777777777777777666443211111 000000000000000000000
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCC----cEEEecCccccCChhHHHHhhChhhhhhhchHHH
Q 008993 360 NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQG----IVASMQPQHLLDDADSARKKLGVDRAERESYLFQ 435 (547)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g----~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~ 435 (547)
.-..-.|..+.|+++..++...+.. +.+.+...... ........++....
T Consensus 238 -----------------~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~-G~~dg~y~lgg~~V-------- 291 (380)
T COG1820 238 -----------------DVYAEIIADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAA-GLPDGEYILGGQTV-------- 291 (380)
T ss_pred -----------------CeEEEEEccCcccCHHHHHHHHhccCCceEEEEEcccccc-CCCCccEEECCEEE--------
Confidence 0012256677788888777554433 33322222111 00000111111111
Q ss_pred HHHHCCCeeeecCCCC-C-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCc
Q 008993 436 SLLANNALLALGSDWP-V-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKI 513 (547)
Q Consensus 436 ~l~~~Gv~~~~GTD~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ 513 (547)
.++.| ...-.|+. . +...+-.+++.++. ..+++++||++|+|.+||+.+|+++++|+|++||+
T Consensus 292 -~v~~g--~~~~~~GtLAGS~Ltm~~avrn~v~------------~~~~~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~ 356 (380)
T COG1820 292 -TVADG--ARRLEDGTLAGSTLTMDEAVRNLVE------------WGGISLAEAVRMASLNPAKALGLDDRLGSIKPGKD 356 (380)
T ss_pred -EEECC--EEECCCCceeeeeeeHHHHHHHHHH------------HhCCCHHHHHHHhhhhHHHHhCCcCcccccCCCcc
Confidence 11222 11111221 1 22678888888764 45689999999999999999999999999999999
Q ss_pred ccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 514 ADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 514 ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
||||++|.|. ++..||++|+++|.
T Consensus 357 Adlvvld~d~----------~v~~T~i~G~~~~~ 380 (380)
T COG1820 357 ADLVVLDDDL----------NVKATWINGEKVFN 380 (380)
T ss_pred cCEEEECCCC----------cEEEEEECCEEeeC
Confidence 9999999887 99999999999874
No 77
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.92 E-value=5.7e-24 Score=223.16 Aligned_cols=142 Identities=22% Similarity=0.259 Sum_probs=96.6
Q ss_pred ceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhh------hhhhchHHHHHH--HCCCeeeecCCCCC
Q 008993 381 FRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDR------AERESYLFQSLL--ANNALLALGSDWPV 452 (547)
Q Consensus 381 ~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~~l~--~~Gv~~~~GTD~~~ 452 (547)
..-.|+..++.+++..+.+.|+..+++|.+...- ....++|... .+.....+..+. +.+.+++++||..
T Consensus 177 ~I~gHap~l~~~eL~~~~~aGi~~dHe~~s~~ea--~e~~~~Gm~~~ir~gs~~~n~~~~~~~~~~~~~~~~~l~TD~~- 253 (552)
T TIGR01178 177 VIDGHCPGLSGKLLNKYISAGISNDHESTSIEEA--REKLRLGMKLMIREGSAAKNLEALHPLINEKNCRSLMLCTDDR- 253 (552)
T ss_pred EEEecCCCCCHHHHHHHHHcCCCCCcCcCCHHHH--HHHHHCCCEEEEeCCccccCHHHHHHHHhhcCCceEEEEeCCC-
Confidence 4667999999999999999999999998754210 0112222211 001111222222 3668999999931
Q ss_pred CCCCh------HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCC
Q 008993 453 ADINP------LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWED 526 (547)
Q Consensus 453 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~ 526 (547)
...++ ...++.++ +.++++++|++|+|.|||+++|+++ .|+|+||+.|||++++...
T Consensus 254 ~~~~~~~~g~l~~~v~~ai-------------~~g~~~~~Al~maT~npA~~lgl~~-~G~I~pG~~ADlvvl~~l~--- 316 (552)
T TIGR01178 254 HVNDILNEGHINHIVRRAI-------------EHGVDPFDALQMASINPAEHFGIDV-GGLIAPGDPADFVILKDLR--- 316 (552)
T ss_pred ChhHHHhcCCHHHHHHHHH-------------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcCCEEEECCCC---
Confidence 12222 23333332 2468999999999999999999987 7999999999999999311
Q ss_pred hhhhcCCeEEEEEECcEEeCC
Q 008993 527 FAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 527 ~~~~~~~~v~~v~v~G~~v~~ 547 (547)
..++..||++|++|.+
T Consensus 317 -----~~~v~~v~~~G~~v~~ 332 (552)
T TIGR01178 317 -----NFKVNKTYVKGKLLDL 332 (552)
T ss_pred -----CceEEEEEECCEEEcc
Confidence 2389999999998753
No 78
>PRK07369 dihydroorotase; Provisional
Probab=99.92 E-value=2.8e-23 Score=212.68 Aligned_cols=144 Identities=15% Similarity=0.106 Sum_probs=91.1
Q ss_pred CCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.++.|.+.... +.++..++.| +++.+||+++..+.+.+.. ..++-|.+.....+.+.++.|....++|
T Consensus 227 ~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~S 306 (418)
T PRK07369 227 GTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAI 306 (418)
T ss_pred CCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhccCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEc
Confidence 34788888876433 3344445554 7889999998866655432 2234444334445778888999999999
Q ss_pred CCCCCCCC----hHHHHHHHHcccCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcC
Q 008993 449 DWPVADIN----PLCAIRTAMKRIPPGWDN---AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILST 521 (547)
Q Consensus 449 D~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~ 521 (547)
|+..-... ++......+......... .+....+++++++++++|.|||++||++ .|+|++|++|||+++|.
T Consensus 307 DHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~ADlvi~d~ 384 (418)
T PRK07369 307 DHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPAELILFDP 384 (418)
T ss_pred CCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcCCEEEEcC
Confidence 97543210 111000000000000000 0113457999999999999999999996 49999999999999997
Q ss_pred CC
Q 008993 522 SS 523 (547)
Q Consensus 522 d~ 523 (547)
+.
T Consensus 385 ~~ 386 (418)
T PRK07369 385 QK 386 (418)
T ss_pred CC
Confidence 63
No 79
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=99.91 E-value=4.1e-25 Score=210.90 Aligned_cols=400 Identities=18% Similarity=0.166 Sum_probs=225.5
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
....++|+|++|++.+.. +..||+++||.|.+|+++..+ |.+.++||+.|+.|+||.||.|+|+..+
T Consensus 12 ~s~rllikgg~vvN~d~~--~~aDV~vedGiI~~vg~~l~i----pgg~~~ida~g~~ViPGgID~Hthlq~p------- 78 (522)
T KOG2584|consen 12 ASNRLLIKGGRVVNDDQS--FKADVYVEDGIIKEVGENLII----PGGVKVIDATGKMVIPGGIDPHTHLQMP------- 78 (522)
T ss_pred cccceeeeCCEEEccCCc--eeeeEEeccCEEEEecccEEc----CCCceEEecCCcEEecCccCccceeccc-------
Confidence 345789999999999766 566999999999999998544 7788999999999999999999999544
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeE-EEEecCCchhhhcHHHHHHcCC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPV-WLSRMDGHMGLANSVALQLVGI 201 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~-~~~~~~~~~~~~~~~~l~~~g~ 201 (547)
+.|.++++||....+++++- -.+ -.+|...++.+. ++....-+..|+..+.....|+
T Consensus 79 -~~G~ts~DdF~~GTkAAlaG--GtT-------------------miID~vlp~~~~slv~afe~wr~~Ad~k~cCDygl 136 (522)
T KOG2584|consen 79 -FMGMTSVDDFFQGTKAALAG--GTT-------------------MIIDFVLPDKGTSLVEAFEKWREWADPKVCCDYGL 136 (522)
T ss_pred -cCCccchhhhhcccHHHhcC--Cce-------------------EEEEEecCCCCchHHHHHHHHHhhcCCceeeeeee
Confidence 56889999999999988761 111 112222222110 0000000111111111111111
Q ss_pred CCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchh
Q 008993 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (547)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 281 (547)
+. .+-.+. ....+.+...+ ..+|+.+|.-+..|..- .+-+-+
T Consensus 137 hv--------------------------------~It~W~-~~v~eem~~l~---~ekGvnsF~~fmayk~~--~~v~d~ 178 (522)
T KOG2584|consen 137 HV--------------------------------GITWWS-PSVKEEMEILV---KEKGVNSFKFFMAYKDL--YMVRDS 178 (522)
T ss_pred eE--------------------------------eeeecC-cchHHHHHHHh---hhcCcceEEeeeeeccc--cccCHH
Confidence 10 011111 12233333333 57789888876655422 222346
Q ss_pred HHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhceeEEec---ccH
Q 008993 282 DFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAI---GDR 358 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~H~~---~~~ 358 (547)
++++.++.+.+.+.+ .++|.-...- ..+....+.+.+... -.-|.. ..-
T Consensus 179 ~lye~l~~~~~lgal-a~vHAEngd~-iae~q~~~l~~gitg--------------------------PEgh~lSRPee~ 230 (522)
T KOG2584|consen 179 ELYEALKVCAELGAL-AMVHAENGDA-IAEGQQRLLELGITG--------------------------PEGHELSRPEEL 230 (522)
T ss_pred HHHHHHHHHhhcchh-heehhhcchh-hhhhhhHHHHcCCcC--------------------------cccccccCchhh
Confidence 778888888877765 3333211111 111111111111110 011211 122
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhH-HHHHHhCCcEEEecCccc--------cCChhHH----HHhhChh
Q 008993 359 ANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGT-AARFGDQGIVASMQPQHL--------LDDADSA----RKKLGVD 425 (547)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~-l~~~~~~g~~~~~~p~~~--------~~~~~~~----~~~~g~~ 425 (547)
+.+.+..++.-+.+.+. .+.+.|....+..+ +.+.++.|..+--.|... ..+.++. ...-+|-
T Consensus 231 EaEA~~rai~ia~~~nc----PlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPl 306 (522)
T KOG2584|consen 231 EAEATNRAITIARQANC----PLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPL 306 (522)
T ss_pred hHHHHHHHHHHHHhcCC----CcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCC
Confidence 33334444444444332 45667766555433 344444453333222110 0000000 0001111
Q ss_pred hhhh-hchHHHHHHHCCCeeeecCCCCCCC-------CChHHHHHHHHcccCCCCCCCCCC---CCCCCHHHHHHHHHHH
Q 008993 426 RAER-ESYLFQSLLANNALLALGSDWPVAD-------INPLCAIRTAMKRIPPGWDNAWIP---SERISLTDALIAHTLS 494 (547)
Q Consensus 426 ~~~~-~~~~~~~l~~~Gv~~~~GTD~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~al~~aT~n 494 (547)
|... .-.-+..++..|..-..|||+...+ -+.|..+...++.......+.|.+ ...+++.+-+..-+.|
T Consensus 307 r~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstn 386 (522)
T KOG2584|consen 307 RPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTN 386 (522)
T ss_pred CCCCCCHHHHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEeccc
Confidence 1100 1113678899999999999976543 234455555555444444444533 3356678888888999
Q ss_pred HHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhc---------------CCeEEEEEECcEEeCC
Q 008993 495 AARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEV---------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 495 ~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~---------------~~~v~~v~v~G~~v~~ 547 (547)
.||++++..++|+|.+|++||+||||.+....|++-. ...+..|+.+|++||+
T Consensus 387 aAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d~NifEGm~~~G~plvtIsrGriv~e 454 (522)
T KOG2584|consen 387 AAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSANDFNIFEGMTVHGVPLVTISRGRVVYE 454 (522)
T ss_pred chhheeccCcCceecccCCCcEEEECCCcceEeccccccccccceeecCcEecceeEEEEeCCeEEEe
Confidence 9999999999999999999999999988655332221 6678899999999984
No 80
>PRK08417 dihydroorotase; Provisional
Probab=99.91 E-value=2.3e-22 Score=204.87 Aligned_cols=164 Identities=15% Similarity=0.165 Sum_probs=105.4
Q ss_pred CCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHH------HhhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSAR------KKLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~------~~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.++.|.+.... +.++..++.| ++..+||+++..+.+.+. +..+|-|.+.....+.+.++.|...+++|
T Consensus 195 ~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~S 274 (386)
T PRK08417 195 KNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTS 274 (386)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHHHHhcCCceEEEc
Confidence 34778888775332 3344445555 788999999887765542 22233333233344667788999999999
Q ss_pred CCCCCCCC----hH-------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEE
Q 008993 449 DWPVADIN----PL-------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFV 517 (547)
Q Consensus 449 D~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlv 517 (547)
|+..-... ++ .++..++..+. ..+....+++++++++++|.|||++||+++ |+|++|+.|||+
T Consensus 275 DHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~----~~~v~~~~~~~~~~~~~~t~~pA~~lgl~~--G~l~~G~~ADlv 348 (386)
T PRK08417 275 LHSAKSNSKKDLAFDEAAFGIDSICEYFSLCY----TYLVKEGIITWSELSRFTSYNPAQFLGLNS--GEIEVGKEADLV 348 (386)
T ss_pred CCCCCCHHHccCCHhHCCCCchHHHHHHHHHH----HHHHhcCCCCHHHHHHHHHHHHHHHhCCCC--CccCCCCcCCEE
Confidence 97543210 01 11111111000 001234568999999999999999999963 999999999999
Q ss_pred EEcCCCCC-------Chhhh-cCCeEEEEEECcEEeCC
Q 008993 518 ILSTSSWE-------DFAAE-VSASIEATYVSGVQAYP 547 (547)
Q Consensus 518 v~d~d~~~-------~~~~~-~~~~v~~v~v~G~~v~~ 547 (547)
++|.+... +.... ...+|..||++|++||+
T Consensus 349 i~d~~~~~~~~~~~~p~~g~~~~g~v~~tiv~G~~v~~ 386 (386)
T PRK08417 349 LFDPNESTIIDDNFSLYSGDELYGKIEAVIIKGKLYLE 386 (386)
T ss_pred EEcCCCCeEeCCCCCCccCCEEeccEEEEEECCEEEeC
Confidence 99976322 11111 14579999999999985
No 81
>PRK04250 dihydroorotase; Provisional
Probab=99.90 E-value=8e-22 Score=200.73 Aligned_cols=156 Identities=16% Similarity=0.129 Sum_probs=95.8
Q ss_pred CCCceEeecCCCChhHHHHHHhCC---cEEEecCccccCChhHHH-----HhhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 378 DQRFRIEHAQHLASGTAARFGDQG---IVASMQPQHLLDDADSAR-----KKLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~~~g---~~~~~~p~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
+.+.++.|.+. .+.++.+++.| +++.+||+++..+.+.+. +..+|-|.+.....+.+.+. -..+++||
T Consensus 197 ~~~lhi~HvSt--~~~~~~i~~~g~~~vt~Ev~ph~L~l~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~--~Id~i~sD 272 (398)
T PRK04250 197 KKPLHICHIST--KDGLKLILKSNLPWVSFEVTPHHLFLTRKDYERNPLLKVYPPLRSEEDRKALWENFS--KIPIIASD 272 (398)
T ss_pred CCCEEEEeCCC--HHHHHHHHHcCCCcEEEEeCHHHhccCHHHHCCCCceEEcCCCCCHHHHHHHHHhhc--cCCEEEcC
Confidence 34777777765 34455555544 789999999987766541 11112222111122233333 26779999
Q ss_pred CCCCC----------CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEE
Q 008993 450 WPVAD----------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVIL 519 (547)
Q Consensus 450 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~ 519 (547)
+.... ..-.+.....+.. ...+..+|++++++++|.|||++||+++ .| |++|++|||+|+
T Consensus 273 HaP~~~~~k~~~~~G~~g~e~~lpl~~~--------~v~~~~lsl~~~v~~~t~npAk~lgl~~-~G-L~~G~~ADlvi~ 342 (398)
T PRK04250 273 HAPHTLEDKEAGAAGIPGLETEVPLLLD--------AANKGMISLFDIVEKMHDNPARIFGIKN-YG-IEEGNYANFAVF 342 (398)
T ss_pred CcccCHHHhhcCCCCcchHHHHHHHHHH--------HHHhcCCCHHHHHHHHHHHHHHHhCCCC-cC-ccCCCcCCEEEE
Confidence 65321 1111111111111 1134569999999999999999999975 69 999999999999
Q ss_pred cCCCCC--Chh------------hh-cCCeEEEEEECcEEeCC
Q 008993 520 STSSWE--DFA------------AE-VSASIEATYVSGVQAYP 547 (547)
Q Consensus 520 d~d~~~--~~~------------~~-~~~~v~~v~v~G~~v~~ 547 (547)
|.+... +.. .. ...+|..||++|++||+
T Consensus 343 D~~~~~~v~~~~~~s~~~~sp~~g~~l~g~v~~tiv~G~~v~~ 385 (398)
T PRK04250 343 DMKKEWTIKAEELYTKAGWTPYEGFKLKGKVIMTILRGEVVME 385 (398)
T ss_pred cCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEE
Confidence 976321 111 11 14488999999999873
No 82
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.90 E-value=3.5e-22 Score=205.53 Aligned_cols=169 Identities=18% Similarity=0.198 Sum_probs=106.4
Q ss_pred CCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.++.|.+.... +.++..++.| +++.+||+++..+.+.+.. ..++-|.+.....+.+.++.|...+++|
T Consensus 212 ~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~s 291 (411)
T TIGR00857 212 GCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDRLALIEGLKDGIIDIIAT 291 (411)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEc
Confidence 34788888886332 3334445555 7889999998766655432 2233333344456778899999999999
Q ss_pred CCCCCCCC----hHHHHHHHHcccCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC
Q 008993 449 DWPVADIN----PLCAIRTAMKRIPPGWDN--AWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 522 (547)
Q Consensus 449 D~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d 522 (547)
|+...... ++......+......... ....+.+++++++++++|.|||+++|++++ |+|++|+.|||+++|.+
T Consensus 292 Dh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~~g~~~~-G~l~~G~~ADlvi~d~~ 370 (411)
T TIGR00857 292 DHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQLLVKGLISLKDLIRMLSINPARIFGLPDK-GTLEEGNPADITVFDLK 370 (411)
T ss_pred CCCCCChHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHHHhHHHHHHhCCCCC-CccCCCCcCCEEEEcCC
Confidence 97532210 000000000000000000 001233699999999999999999999764 99999999999999977
Q ss_pred CCC--Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 523 SWE--DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 523 ~~~--~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
... +..++. ..+|..|+++|++||+
T Consensus 371 ~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~tiv~G~~v~~ 410 (411)
T TIGR00857 371 KEWTINAETFYSKAKNTPFEGMSLKGKPIATILRGKVVYE 410 (411)
T ss_pred CCEEEchHHCccCCCCCCcCCCEEEeEEEEEEECCEEEec
Confidence 432 112211 2379999999999974
No 83
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.89 E-value=5.1e-22 Score=200.03 Aligned_cols=133 Identities=17% Similarity=0.180 Sum_probs=88.2
Q ss_pred eEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC-eeeecCCCCCCCCChHHH
Q 008993 382 RIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGSDWPVADINPLCA 460 (547)
Q Consensus 382 ~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv-~~~~GTD~~~~~~~~~~~ 460 (547)
...|=...-+|.++++ +.|+.+.+--.+... .....++.+.+.|. .+.+-||.....-...++
T Consensus 226 ~tDHE~~t~EEa~~kl-r~Gm~i~iReGS~a~---------------dl~~l~~~i~e~~~~~~~lcTDD~~p~dl~~eG 289 (584)
T COG1001 226 STDHESTTAEEALEKL-RLGMKIMIREGSAAK---------------DLAALLPAITELGSRRVMLCTDDRHPDDLLEEG 289 (584)
T ss_pred CcCcccCCHHHHHHHH-hCCcEEEEEcCchhh---------------hHHHHHHHHhhcCCceEEEECCCCChhHhhhcC
Confidence 4456556555656665 568877766443321 11123455566775 577778753332111111
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEE
Q 008993 461 IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYV 540 (547)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v 540 (547)
.-.-+.|+. -+.|++|.+|++|||+|||+.+|+++ +|.|+||+.|||++++ |+ +..++.+|++
T Consensus 290 hld~~vR~A--------i~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~~ADlvi~~-DL-------~~~~v~~V~~ 352 (584)
T COG1001 290 HLDRLVRRA--------IEEGVDPLDAYQMATINPAEHYGLDD-LGLIAPGRRADLVILE-DL-------RNFKVTSVLI 352 (584)
T ss_pred CHHHHHHHH--------HHcCCCHHHHHHHHhcCHHHHcCCcc-cccccCCccccEEEEc-cc-------ccCceeEEEE
Confidence 111111211 35689999999999999999999998 9999999999999998 32 2449999999
Q ss_pred CcEEeCC
Q 008993 541 SGVQAYP 547 (547)
Q Consensus 541 ~G~~v~~ 547 (547)
+|++|.+
T Consensus 353 ~G~~v~~ 359 (584)
T COG1001 353 KGRVVAE 359 (584)
T ss_pred CCEEEec
Confidence 9999853
No 84
>PRK01211 dihydroorotase; Provisional
Probab=99.89 E-value=1.9e-21 Score=197.78 Aligned_cols=150 Identities=13% Similarity=0.043 Sum_probs=97.2
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH----HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS----ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI 455 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~----~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~ 455 (547)
+.++.|.... +.+ ..+++.+||+++..+.+. ..+..+|-|.+.....+.+.+..|...+++||+..-..
T Consensus 209 ~~hi~HvSt~--~~~-----~~vt~Ev~phhL~l~~~~~~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i~SDHaP~~~ 281 (409)
T PRK01211 209 TKIIAHVSSI--DVI-----GRFLREVTPHHLLLNDDMPLGSYGKVNPPLRDRWTQERLLEEYISGRFDILSSDHAPHTE 281 (409)
T ss_pred CcEEEEecCh--hhc-----CceEEEecHHHHccccccccCCceeEcCCCCCHHHHHHHHHHHhCCCCCEEeCCCCCCCh
Confidence 4566666542 222 368999999998755432 11223333433334456778889999999999753221
Q ss_pred -------------ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC
Q 008993 456 -------------NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 522 (547)
Q Consensus 456 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d 522 (547)
.-.+.+...+.. ...+.++|+++++++.|.|||++||++ +|+|++|++|||+|||.+
T Consensus 282 ~eK~~~~~a~~G~~gle~~lpl~~~--------~v~~~~isl~~~v~~~s~nPAki~gl~--kG~l~~G~~ADlvi~D~~ 351 (409)
T PRK01211 282 EDKQEFEYAKSGIIGVETRVPLFLA--------LVKKKILPLDVLYKTAIERPASLFGIK--KGKIEEGYDADFMAFDFT 351 (409)
T ss_pred hHhCCHhhCCCCCCcHHHHHHHHHH--------HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCcccCCCcCCEEEEcCC
Confidence 111111111110 123557999999999999999999994 699999999999999976
Q ss_pred CCC--Chhhh------------cCCeEEEEEECcEEeC
Q 008993 523 SWE--DFAAE------------VSASIEATYVSGVQAY 546 (547)
Q Consensus 523 ~~~--~~~~~------------~~~~v~~v~v~G~~v~ 546 (547)
... ....+ .-.+|..|+++|++||
T Consensus 352 ~~~~v~~~~~~s~~~~spf~G~~~~~v~~tiv~G~~v~ 389 (409)
T PRK01211 352 NIKKINDKRLHSKCPVSPFNGFDAIFPSHVIMRGEVVI 389 (409)
T ss_pred CeEEEChHHhhccCCCCCCCCCEeccEEEEEECCEEEE
Confidence 321 11111 1117999999999987
No 85
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.89 E-value=1.1e-21 Score=181.57 Aligned_cols=134 Identities=23% Similarity=0.226 Sum_probs=89.9
Q ss_pred ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh-----------hhhchHHHHHHHCCCeeeecCCCCCCCCChH
Q 008993 390 ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA-----------ERESYLFQSLLANNALLALGSDWPVADINPL 458 (547)
Q Consensus 390 ~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~-----------~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~ 458 (547)
+.+-++.....|+.+.-+|.... .....+.+|.... ..+.-..+++.+.|+...+.||.-+ .+.+
T Consensus 233 T~~hV~es~~~Gv~iAEFPtT~e--AA~asr~~Gm~VlMGAPNivrGgSHsGNvsA~ela~~glLDiLsSDY~P--~SLl 308 (377)
T COG3454 233 TVEHVAESHGLGVAIAEFPTTVE--AAKASRELGMQVLMGAPNIVRGGSHSGNVSARELAQHGLLDILSSDYVP--ASLL 308 (377)
T ss_pred cHHHHHHHHhcCeeEEeCccHHH--HHHHHHHhCchhhcCCCceeccCCcccchhHHHHHhCCceeeecccCCc--HHHH
Confidence 33445566677888888887532 1111222332222 1233346899999999999999533 2223
Q ss_pred HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEE
Q 008993 459 CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEAT 538 (547)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v 538 (547)
...+... . ....+++++|++|+|.|||+++|+.| +|.|+||++|||+.+..+-. -..|+.|
T Consensus 309 ~A~F~La---~--------~~~~~~lpqAvalvt~nPA~algl~D-RG~Ia~GlrADlv~v~~~~~-------vp~ir~v 369 (377)
T COG3454 309 HAAFRLA---D--------LGSNISLPQAVALVTKNPARALGLTD-RGRIAPGLRADLVRVRRDGG-------VPVIRTV 369 (377)
T ss_pred HHHHHHh---h--------hhcccCHHHHHHHhccCHHHhcCCCc-ccccccccccceEEEecCCC-------Cceeeee
Confidence 3222211 0 22335899999999999999999997 89999999999998864421 1289999
Q ss_pred EECcEEeC
Q 008993 539 YVSGVQAY 546 (547)
Q Consensus 539 ~v~G~~v~ 546 (547)
|+.|+.|+
T Consensus 370 wr~G~rv~ 377 (377)
T COG3454 370 WRAGKRVA 377 (377)
T ss_pred eecceecC
Confidence 99999885
No 86
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.89 E-value=4.1e-21 Score=197.08 Aligned_cols=96 Identities=24% Similarity=0.274 Sum_probs=69.3
Q ss_pred hHHHHHHHCCC---eeeecCCCC----CCC---------CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 432 YLFQSLLANNA---LLALGSDWP----VAD---------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 432 ~~~~~l~~~Gv---~~~~GTD~~----~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
..++.++++|+ ++.++||+. ... ......+...+.. .....++|++++++++|.||
T Consensus 264 ~~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~~~~~~~~~--------~v~~~~i~~~~al~~~T~np 335 (387)
T cd01308 264 EALKRLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVDTLLREVRE--------AVKCGDIPLEVALRVITSNV 335 (387)
T ss_pred HHHHHHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHHHHHHHHHH--------HHHhCCCCHHHHHHHHHHHH
Confidence 45778889986 379999962 110 0111112221111 11234699999999999999
Q ss_pred HHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 496 ARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 496 A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
|+++|+++ +|+|+||++|||+++|.+. ++..|+++|++|+
T Consensus 336 A~~lg~~~-~G~i~~G~~ADlvv~d~~~----------~~~~~~~~G~~v~ 375 (387)
T cd01308 336 ARILKLRK-KGEIQPGFDADLVILDKDL----------DINSVIAKGQIMV 375 (387)
T ss_pred HHHhCCCC-CCCcCCCCcCCEEEEcCCC----------CEEEEEECCEEEE
Confidence 99999986 7999999999999999873 6788889998875
No 87
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.89 E-value=3.9e-21 Score=201.77 Aligned_cols=68 Identities=29% Similarity=0.394 Sum_probs=55.0
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIP 114 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~ 114 (547)
...+++|+|++|+++.......++|+|++|||++|++.... ..+.++||++|++|+|||||+|+|+..
T Consensus 28 ~~~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~----~~~~~vIDa~G~~v~PGlIDaHvHies 95 (588)
T PRK10027 28 AVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYAD----APALQRIDARGATAVPGFIDAHLHIES 95 (588)
T ss_pred CCCCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCC----CCCCeEEECCCCEEEECeEeccccCCc
Confidence 44678999999999855555667999999999999764211 124689999999999999999999853
No 88
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.89 E-value=2.1e-21 Score=195.27 Aligned_cols=67 Identities=30% Similarity=0.395 Sum_probs=58.0
Q ss_pred CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCe
Q 008993 455 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSAS 534 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~ 534 (547)
..+...++..+. ..+++++++++++|.|||+++|+++++|+|++|++|||+++|.+. +
T Consensus 314 ltl~~~v~~l~~------------~~~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvv~d~~~----------~ 371 (380)
T TIGR00221 314 LTMIEGARNLVE------------FTNISLTDAARMSSLNPARALGIDDRLGSVTVGKDANLVVFTPDF----------E 371 (380)
T ss_pred hhHHHHHHHHHH------------hhCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCcCCEEEECCCC----------C
Confidence 567777776542 346899999999999999999998878999999999999999875 8
Q ss_pred EEEEEECcE
Q 008993 535 IEATYVSGV 543 (547)
Q Consensus 535 v~~v~v~G~ 543 (547)
+..||++|+
T Consensus 372 v~~t~~~G~ 380 (380)
T TIGR00221 372 VILTIVNGN 380 (380)
T ss_pred EEEEEeCCC
Confidence 999999995
No 89
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.88 E-value=4.9e-21 Score=193.20 Aligned_cols=71 Identities=28% Similarity=0.396 Sum_probs=62.0
Q ss_pred CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCe
Q 008993 455 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSAS 534 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~ 534 (547)
..+...++..+ ...+++++++++++|.|||+.+|+++++|+|++|+.|||+++|.+. +
T Consensus 311 l~l~~~v~~l~------------~~~~~~~~eal~~aT~npA~~lgl~~~~G~i~~G~~ADlvvld~~~----------~ 368 (382)
T PRK11170 311 LTMIEAVRNLV------------EHVGIALDEALRMATLYPARAIGVDKRLGSIEAGKVANLTAFTRDF----------K 368 (382)
T ss_pred hHHHHHHHHHH------------HhcCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEECCCC----------c
Confidence 56777777655 3357999999999999999999998878999999999999999775 8
Q ss_pred EEEEEECcEEeCC
Q 008993 535 IEATYVSGVQAYP 547 (547)
Q Consensus 535 v~~v~v~G~~v~~ 547 (547)
+..||++|+++|.
T Consensus 369 v~~v~~~G~~~~~ 381 (382)
T PRK11170 369 ITKTIVNGNEVVT 381 (382)
T ss_pred EEEEEECCEEeec
Confidence 9999999999873
No 90
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.88 E-value=1.9e-20 Score=189.35 Aligned_cols=153 Identities=23% Similarity=0.295 Sum_probs=99.7
Q ss_pred CCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH--HHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCC
Q 008993 379 QRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS--ARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADIN 456 (547)
Q Consensus 379 ~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~--~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~ 456 (547)
.++++.|.+.. +.++..++.|+++.+||+++..+.+. ..+..+|-|.+.....+.+.++. ..+++||+..-...
T Consensus 191 ~~lhi~HvSt~--~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~ 266 (392)
T PRK00369 191 QNVHITHASNP--RTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSF 266 (392)
T ss_pred CCEEEEECCCH--HHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHH
Confidence 46778777754 45777777899999999998754431 12223333432222334445555 67899997543211
Q ss_pred ----hHH----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC
Q 008993 457 ----PLC----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 522 (547)
Q Consensus 457 ----~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d 522 (547)
++. .....+.. ...+.+++++++++++|.|||+++|++. |.|++|+.|||++||.+
T Consensus 267 ~K~~~f~~~~~Gi~GlE~~lpll~~--------~v~~~~lsl~~~v~~~s~nPA~ilgl~~--g~i~~G~~ADlvi~d~~ 336 (392)
T PRK00369 267 EKLQPYEVCPPGIAALSFTPPFIYT--------LVSKGILSIDRAVELISTNPARILGIPY--GEIKEGYRANFTVIQFE 336 (392)
T ss_pred HccCCHhhCCCCCeeHHHHHHHHHH--------HHHcCCCCHHHHHHHHHHHHHHHhCCCC--CccCCCCccCEEEEeCC
Confidence 111 10111110 1234579999999999999999999963 88999999999999987
Q ss_pred CCCChhhh-------------cCCeEEEEEECcEEeC
Q 008993 523 SWEDFAAE-------------VSASIEATYVSGVQAY 546 (547)
Q Consensus 523 ~~~~~~~~-------------~~~~v~~v~v~G~~v~ 546 (547)
.+. +..+ ...+|..||++|++||
T Consensus 337 ~~~-~~~~~sk~~~sp~~G~~l~G~v~~ti~~G~~v~ 372 (392)
T PRK00369 337 DWR-YSTKYSKVIETPLDGFELKASVYATIVQGKLAY 372 (392)
T ss_pred cee-EccccccCCCCCCCCCEeeeEEEEEEECCEEEE
Confidence 432 1111 1459999999999987
No 91
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.87 E-value=3.6e-20 Score=188.87 Aligned_cols=110 Identities=17% Similarity=0.066 Sum_probs=73.5
Q ss_pred HHHHCCCeeeecCCCCCCC-CChHHH-HHHHHcccCCC------------CCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 436 SLLANNALLALGSDWPVAD-INPLCA-IRTAMKRIPPG------------WDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 436 ~l~~~Gv~~~~GTD~~~~~-~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
.+.+.=-++.+.||+|..+ +.-+.. ++..+.+.... ....-.-+-.+|++++++++|.|||++||+
T Consensus 367 ll~~dp~~~~~tTDhPn~gpf~~YP~~i~~lm~~~~r~~~~~~~~~~~~~~~~l~~~~reLSLeei~~mtT~nPAKiLGL 446 (541)
T cd01304 367 LLIDDPWKVILTTDHPNGGPFTRYPRIIAWLMSKKFRAEEIATLHKWAQDRSALPGIDREYSLYEIAIMTRAGPAKLLGL 446 (541)
T ss_pred HHhCCcceEEeecCCCCCCCcccHHHHHHHHhCHHHHHHHHHhcCHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 4455556899999998765 222222 22222110000 000001234589999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCC-Chhhhc-----CCeEEEEEECcEEeC
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWE-DFAAEV-----SASIEATYVSGVQAY 546 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~-----~~~v~~v~v~G~~v~ 546 (547)
++ +|+|++|+.|||+|+|.++.. ...++. ..+|..||++|++||
T Consensus 447 ~~-kG~L~~G~~ADLvIfD~n~~~v~~~dl~s~~~~~gkV~~Tiv~GkvVv 496 (541)
T cd01304 447 SD-KGHLGVGADADIAIYDDDPDQVDPSDYEKVEKAFSRAAYVLKDGEIVV 496 (541)
T ss_pred CC-CCccCCCCcCCEEEEeCCcCccCchhhcCceeecCcEEEEEECCEEEE
Confidence 75 799999999999999987653 222222 448999999999986
No 92
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.87 E-value=5.4e-21 Score=194.13 Aligned_cols=128 Identities=20% Similarity=0.225 Sum_probs=86.9
Q ss_pred eEeecCCCChhHHHHHHhCC--cEEEecCccccCChhHHHHhhChhhhhhhchHHHHH--HHCCCeeeecCCCCCC-CCC
Q 008993 382 RIEHAQHLASGTAARFGDQG--IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSL--LANNALLALGSDWPVA-DIN 456 (547)
Q Consensus 382 ~i~H~~~~~~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l--~~~Gv~~~~GTD~~~~-~~~ 456 (547)
.|.|+.|+++++++.+.+.. ..+.++|.++....- + .+.+++... ...+..+.+.+|...+ ..+
T Consensus 242 li~dg~Hv~~~~~~~~~r~~g~~~~~lvtD~~~~~G~------~-----~g~y~~~~~~~~~~~~~~~~~~g~laG~~~~ 310 (374)
T cd00854 242 LIADGIHVHPAAVRLAYRAKGADKIVLVTDAMAAAGL------P-----DGEYELGGQTVTVKDGVARLADGTLAGSTLT 310 (374)
T ss_pred EEcCCCcCCHHHHHHHHHhcCCCcEEEEeccccccCC------C-----CCeEEECCEEEEEECCEEEcCCCCeeehHhh
Confidence 77899999999999888774 455666665431110 0 011111110 0112233344444333 245
Q ss_pred hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEE
Q 008993 457 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 536 (547)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~ 536 (547)
+...+...+. ..+++++++++++|.|||+.+|++++.|+|++|+.|||++++.+. ++.
T Consensus 311 l~~~~~~l~~------------~~~l~~~~al~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~~----------~v~ 368 (374)
T cd00854 311 MDQAVRNMVK------------WGGCPLEEAVRMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDDL----------NVK 368 (374)
T ss_pred HHHHHHHHHH------------hhCCCHHHHHHHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCCC----------cEE
Confidence 6666665442 345899999999999999999999778999999999999999875 899
Q ss_pred EEEECc
Q 008993 537 ATYVSG 542 (547)
Q Consensus 537 ~v~v~G 542 (547)
.||++|
T Consensus 369 ~~~~~G 374 (374)
T cd00854 369 ATWING 374 (374)
T ss_pred EEEeCc
Confidence 999987
No 93
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.87 E-value=3.9e-21 Score=175.87 Aligned_cols=69 Identities=32% Similarity=0.575 Sum_probs=58.3
Q ss_pred cccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 117 (547)
+.++|++|++++|.........+|.|.||||++++.-.. |..+++||++|.+|.|||||.|+|.+.++.
T Consensus 3 qfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~d~~a-----pa~tq~Ida~Gc~VspG~iDlHvHvy~ggt 71 (386)
T COG3964 3 QFDILLTGGRLIDPARGIDEITNIAIINGKIAAADDYPA-----PAETQIIDADGCIVSPGLIDLHVHVYYGGT 71 (386)
T ss_pred ccceeeeCCeecccccccCccceeeeecCeEEeccCcCC-----ChhheEEccCccEeccCeeeeeeEEecCCC
Confidence 458999999999985555566699999999999994322 566799999999999999999999998875
No 94
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.87 E-value=8.8e-20 Score=187.00 Aligned_cols=68 Identities=19% Similarity=0.197 Sum_probs=54.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC---Chhhh--cCCeEEEEEECcEEeCC
Q 008993 479 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE---DFAAE--VSASIEATYVSGVQAYP 547 (547)
Q Consensus 479 ~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~---~~~~~--~~~~v~~v~v~G~~v~~ 547 (547)
+-.+|++|+++|+|.|||++||+++ +|+|++|+.|||+|+|.++.. +...+ ...++..||++|++|+.
T Consensus 427 ~Re~sL~EI~~mtTanPAkaLGL~d-kG~L~pGa~ADIaI~D~~~~~~~~~~~~v~~~~~~v~~Tik~G~vV~~ 499 (556)
T TIGR03121 427 DREYSLYEIAIMTRAGPAKLLGLTD-RGHLGVGADADIAVYDINPDDVDTDYADVEKAFSTALYVFKDGEIVVK 499 (556)
T ss_pred cCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcCCEEEEeCcccccCCchHHHhhccCCccEEEECCEEEEE
Confidence 4578999999999999999999987 699999999999999865432 11111 13578999999999863
No 95
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.82 E-value=6.2e-18 Score=171.88 Aligned_cols=64 Identities=22% Similarity=0.174 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-Chhhhc--------CCeEEEEEECcEE
Q 008993 480 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEV--------SASIEATYVSGVQ 544 (547)
Q Consensus 480 ~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~--------~~~v~~v~v~G~~ 544 (547)
.|++++++++++|.|||+++|+++ .|+|++|+.|||++|+.+... ...+.. ...++.||++|+.
T Consensus 291 ~g~~~~ea~~~~t~npa~~~gl~~-~g~i~~g~~ad~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 363 (365)
T TIGR03583 291 LGYSLEEVIEKVTKNAAEILKLTQ-KGRLQEGYDADLTIFTVKAEPKKLTDSEGDSRIAEEQIKPLAVIIGGEY 363 (365)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcccEEEEecCCCCceeecCCCCEEEeccccceEEEEECCEE
Confidence 379999999999999999999976 799999999999999964322 222221 4466889999996
No 96
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.82 E-value=1.2e-18 Score=179.97 Aligned_cols=153 Identities=21% Similarity=0.280 Sum_probs=100.7
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+..|+.+... ..+.++.+. +. ...|+....++.++++ +.|+.+.+++.+...+.+..
T Consensus 137 v~~Ha~g~~~--~~L~a~l~a----Gi-----~~dH~~~~~eea~e~l-~~G~~i~i~~g~~~~~~~~~----------- 193 (422)
T cd01295 137 VDGHAPGLSG--EELNAYMAA----GI-----STDHEAMTGEEALEKL-RLGMYVMLREGSIAKNLEAL----------- 193 (422)
T ss_pred EEEeCCCCCH--HHHHHHHHc----CC-----CCCcCCCcHHHHHHHH-HCCCEEEEECcccHhhHHHH-----------
Confidence 8899876552 223333221 21 2258888777777777 68999998877542111111
Q ss_pred hchHHHHHH-HCCCeeeecCCCCCCCCChH-HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccc
Q 008993 430 ESYLFQSLL-ANNALLALGSDWPVADINPL-CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 507 (547)
Q Consensus 430 ~~~~~~~l~-~~Gv~~~~GTD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~Gs 507 (547)
++.+. +.+.+++++||.+... ++. ......+.+.. ...+++++++++++|.|||+.+|+ +++|+
T Consensus 194 ----~~~l~~~~~~~i~l~TD~~~~~-~~~~~g~~~~v~r~a--------~~~g~s~~eal~~aT~n~A~~~gl-~~~G~ 259 (422)
T cd01295 194 ----LPAITEKNFRRFMFCTDDVHPD-DLLSEGHLDYIVRRA--------IEAGIPPEDAIQMATINPAECYGL-HDLGA 259 (422)
T ss_pred ----HHhhhhccCCeEEEEcCCCCch-hhhhcchHHHHHHHH--------HHcCCCHHHHHHHHhHHHHHHcCC-CCCcc
Confidence 11111 2589999999986322 111 11111221111 245799999999999999999999 45899
Q ss_pred ccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 508 LSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 508 I~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|+|||.|||++++.. ...++..||++|++||+
T Consensus 260 i~~G~~AD~vv~~~~--------~~~~v~~v~~~G~~v~~ 291 (422)
T cd01295 260 IAPGRIADIVILDDL--------ENFNITTVLAKGIAVVE 291 (422)
T ss_pred cCCCCcCCEEEECCC--------CCCceEEEEECCeEEEE
Confidence 999999999999831 13389999999999874
No 97
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.81 E-value=5.9e-18 Score=170.05 Aligned_cols=117 Identities=17% Similarity=0.202 Sum_probs=79.4
Q ss_pred ceEeecCCCCh-----------hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC-eeeecC
Q 008993 381 FRIEHAQHLAS-----------GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA-LLALGS 448 (547)
Q Consensus 381 ~~i~H~~~~~~-----------~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv-~~~~GT 448 (547)
..+.|+...+. +.+..+.+.|+.+.+...... ....+.+.+.++|+ +..++|
T Consensus 187 ~~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~~----------------~~~~~~~~l~~~G~~~~~lst 250 (338)
T cd01307 187 DVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTAS----------------FSFRVARAAIAAGLLPDTISS 250 (338)
T ss_pred CEEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCCc----------------hhHHHHHHHHHCCCCCeeecC
Confidence 46788887654 567888889988775532100 11124567888997 568999
Q ss_pred CCCCCC-C-ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCC
Q 008993 449 DWPVAD-I-NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS 523 (547)
Q Consensus 449 D~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~ 523 (547)
|.+..+ . .+...+...+... ...+++++++++++|.|||+++|++ ++|+|++|+.|||++++.+-
T Consensus 251 D~~~~~~~~~p~~~l~~~l~~l---------~~~gi~~ee~~~~~T~NpA~~lgl~-~~G~l~~G~~ad~~v~~~~~ 317 (338)
T cd01307 251 DIHGRNRTNGPVYALATTLSKL---------LALGMPLEEVIEAVTANPARMLGLA-EIGTLAVGYDADLTVFDLKD 317 (338)
T ss_pred CccccCCCCCccccHHHHHHHH---------HHcCCCHHHHHHHHHHHHHHHcCCC-CCCccCCCCcCCEEEEeCCC
Confidence 985421 1 1111111111111 2347999999999999999999995 58999999999999999764
No 98
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=5e-18 Score=162.51 Aligned_cols=71 Identities=28% Similarity=0.548 Sum_probs=60.3
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 116 (547)
...|++|++++|||+++..++..+|.|+||+|++|+.....-. ...++||+.|++|.|||||+|+|-....
T Consensus 4 ~~YD~ViR~g~ifDGtGnp~f~tdvgIrDGvIaav~kg~~dg~---~~~eevDaagriVaPGFIDvHtHyD~~~ 74 (579)
T COG3653 4 VTYDVVIRDGLIFDGTGNPPFTTDVGIRDGVIAAVAKGALDGT---GCPEEVDAAGRIVAPGFIDVHTHYDAEV 74 (579)
T ss_pred eeeeEEEeeceEEeCCCCCccccccccccceEEEEeccccccc---CCCeeecccCcEecccEEEeeeccccee
Confidence 4568999999999999999998899999999999998754211 2238999999999999999999976443
No 99
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.80 E-value=4.1e-18 Score=171.63 Aligned_cols=143 Identities=19% Similarity=0.219 Sum_probs=91.1
Q ss_pred CCCceEeecCCCChhHHHHHHhC--CcEEEecCccccCChhHHHHhhC-------hhhhhhhchHHHHHHHCCCeeeecC
Q 008993 378 DQRFRIEHAQHLASGTAARFGDQ--GIVASMQPQHLLDDADSARKKLG-------VDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~~~--g~~~~~~p~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+.+.++.|.... +.++.+++. +++..+||+++..+.+.+.+ .+ +-|.+.....+.+.++.|...++||
T Consensus 171 ~~~~hi~Hvs~~--~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~~-~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~S 247 (361)
T cd01318 171 GARLHICHVSTP--EELKLIKKAKPGVTVEVTPHHLFLDVEDYDR-LGTLGKVNPPLRSREDRKALLQALADGRIDVIAS 247 (361)
T ss_pred CCCEEEEeCCCH--HHHHHHHHhCCCeEEEeCHHHhhcCHHHHhc-CCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEee
Confidence 347788888765 455655554 89999999998776665542 22 2222122234566789999999999
Q ss_pred CCC-CCCCChHHHHHHHHcccCCC---CC--CCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC
Q 008993 449 DWP-VADINPLCAIRTAMKRIPPG---WD--NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS 522 (547)
Q Consensus 449 D~~-~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d 522 (547)
|+. ....+....++.+.....-. .. ..+..+.+++++++++++|.|||+++|+++ +|+|++|+.|||+++|.+
T Consensus 248 Dh~P~~~~~k~~~~~~a~~G~~g~e~~l~~~~~~v~~~~l~l~~a~~~~t~nPA~~lgl~~-~G~i~~G~~ADlvv~d~~ 326 (361)
T cd01318 248 DHAPHTLEEKRKGYPAAPSGIPGVETALPLMLTLVNKGILSLSRVVRLTSHNPARIFGIKN-KGRIAEGYDADLTVVDLK 326 (361)
T ss_pred CCCCCCHHHccCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcCCEEEEeCC
Confidence 953 22111000000000000000 00 001234579999999999999999999976 799999999999999977
Q ss_pred CC
Q 008993 523 SW 524 (547)
Q Consensus 523 ~~ 524 (547)
..
T Consensus 327 ~~ 328 (361)
T cd01318 327 EE 328 (361)
T ss_pred CC
Confidence 43
No 100
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.76 E-value=1.9e-17 Score=168.58 Aligned_cols=137 Identities=20% Similarity=0.266 Sum_probs=89.8
Q ss_pred CCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|...... +.++..++.| +...++|++...+.+.+.. ..++-|.+....++.+++++|+..++|||
T Consensus 186 ~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~~~~~~k~~Pplr~~~~~~~l~~~~~~G~i~~igsD 265 (374)
T cd01317 186 ARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASD 265 (374)
T ss_pred CcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhccCCceEEcCCCCCHHHHHHHHHHHhcCCceEEEcC
Confidence 4778888774222 3444555556 6678888887655544322 11222222345678899999999999999
Q ss_pred CCCCCCC----hHH---------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccE
Q 008993 450 WPVADIN----PLC---------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADF 516 (547)
Q Consensus 450 ~~~~~~~----~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADl 516 (547)
+...+.+ ++. ++....... .+.+...++++++++++|.|||+++|+++ |+|++|++|||
T Consensus 266 h~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~------~~~~~~~~~~~~~~~~~t~npA~~lgl~~--G~l~~G~~ADl 337 (374)
T cd01317 266 HAPHTDEEKDLPFAEAPPGIIGLETALPLLWT------LLVKGGLLTLPDLIRALSTNPAKILGLPP--GRLEVGAPADL 337 (374)
T ss_pred CCCCCHHHccCCHhhCCCcHhHHHHHHHHHHH------HHHHcCCCCHHHHHHHHHHHHHHHhCCCC--CcccCCCcCCE
Confidence 8654321 111 111111000 01134468999999999999999999973 99999999999
Q ss_pred EEEcCCC
Q 008993 517 VILSTSS 523 (547)
Q Consensus 517 vv~d~d~ 523 (547)
+++|.+.
T Consensus 338 vi~d~~~ 344 (374)
T cd01317 338 VLFDPDA 344 (374)
T ss_pred EEECCCC
Confidence 9999774
No 101
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.76 E-value=6.7e-17 Score=153.53 Aligned_cols=118 Identities=17% Similarity=0.155 Sum_probs=81.4
Q ss_pred hHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC------CChHHHHHHHHccc-CCCCCCCCCCCCCCCHHHHH
Q 008993 416 DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD------INPLCAIRTAMKRI-PPGWDNAWIPSERISLTDAL 488 (547)
Q Consensus 416 ~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~al 488 (547)
.+.+.|+.++.. ..-..|.+.|+.-.++||+-..+ ...|+....+-..+ ...++... ...+-...=+
T Consensus 332 aFAeSRIR~eTI----AAEdiLhDmGafSmisSDSQAMGRvGEvi~RtwQtA~kmK~qrG~L~~d~~~--nDN~RvkRYi 405 (568)
T COG0804 332 AFAESRIRPETI----AAEDILHDMGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALPEDAGG--NDNFRVKRYI 405 (568)
T ss_pred hhhhhccchhhh----hHHHHHhhccceEEeccchHhhhccchhhhhHHHHHHHHHHhcCCCCCCCCC--CccHHHhhhh
Confidence 334445444433 34456789999999999986553 23455444443321 11111111 1234456668
Q ss_pred HHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 489 IAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 489 ~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
...|+|||-.-|+++.+||+|+||.||||+|+..+|.. ++..|+++|-+.+
T Consensus 406 aKyTINPAIthGis~~vGSvEvGK~ADlVLW~PaFFGv-------KP~~vlkgG~ia~ 456 (568)
T COG0804 406 AKYTINPAITHGISHEVGSVEVGKLADLVLWDPAFFGV-------KPELVLKGGMIAW 456 (568)
T ss_pred hheecCHHHhcccchhccceeccceeeeeeechhhcCC-------CcceEEecceeee
Confidence 89999999999999999999999999999999888854 8889999998754
No 102
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.76 E-value=1.1e-16 Score=156.80 Aligned_cols=121 Identities=23% Similarity=0.252 Sum_probs=88.3
Q ss_pred CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHccc
Q 008993 389 LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRI 468 (547)
Q Consensus 389 ~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~ 468 (547)
.+.+.++.+++.|+.+.+++..... +. . ..+..+++++.++|+++++|||.... +++.......
T Consensus 205 ~t~e~a~~a~~~G~~vv~gapn~lr---------g~-s-~~g~~~~~~ll~~Gv~~al~SD~~p~--sll~~~~~la--- 268 (325)
T cd01306 205 TTLEAAKAARELGLQTLMGAPNVVR---------GG-S-HSGNVSARELAAHGLLDILSSDYVPA--SLLHAAFRLA--- 268 (325)
T ss_pred CCHHHHHHHHHCCCEEEecCccccc---------Cc-c-ccccHhHHHHHHCCCeEEEEcCCCcH--hHHHHHHHHH---
Confidence 5667777888888877766532210 10 0 02345789999999999999998432 3333322211
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECc
Q 008993 469 PPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSG 542 (547)
Q Consensus 469 ~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G 542 (547)
...+++++++|+++|.|||+++|+++ +|+|++||.|||++++.+.- ...+..||++|
T Consensus 269 ---------~~~gl~l~eAl~~aT~nPA~~lGl~d-~G~I~~G~~ADlvvvd~~~~-------~p~v~~v~~~G 325 (325)
T cd01306 269 ---------DLGGWSLPEAVALVSANPARAVGLTD-RGSIAPGKRADLILVDDMDG-------VPVVRTVWRGG 325 (325)
T ss_pred ---------HHcCCCHHHHHHHHhHHHHHHcCCCC-CCCcCCCCCCCEEEEeCCCC-------CCccceEEeCc
Confidence 34579999999999999999999986 79999999999999998632 22788899987
No 103
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.74 E-value=5.2e-17 Score=163.53 Aligned_cols=121 Identities=25% Similarity=0.268 Sum_probs=84.7
Q ss_pred CCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHH-------hhChhhhhhhchHHHHHHHC-CCeeeecCCC
Q 008993 379 QRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARK-------KLGVDRAERESYLFQSLLAN-NALLALGSDW 450 (547)
Q Consensus 379 ~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~-------~~g~~~~~~~~~~~~~l~~~-Gv~~~~GTD~ 450 (547)
....+.|+.++++++++++++.+..+..||...........+ ..+.........++..+.+. |+. +|||+
T Consensus 205 ~~~~~~h~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg 282 (333)
T PF01979_consen 205 GVDLIAHGTHLSDEEIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDG 282 (333)
T ss_dssp HCEEEEEHTTSEHHHHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCT
T ss_pred ccceeeccccCCHHHhhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--ccccc
Confidence 377999999999999999999999999999754320000000 00000001233355566665 888 99993
Q ss_pred CCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEc
Q 008993 451 PVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILS 520 (547)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d 520 (547)
.. .++..++.. +++++++|+|+|.|||+++|+++++|+|++||+|||||||
T Consensus 283 ~~------~~l~~~~~~-------------~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 283 VA------EELKLFVRL-------------GISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp TC------HHHHHHHHH-------------HSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred cc------ccccccccc-------------cccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 22 555554432 3899999999999999999998889999999999999997
No 104
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.72 E-value=6.1e-16 Score=154.90 Aligned_cols=139 Identities=17% Similarity=0.151 Sum_probs=89.6
Q ss_pred CCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|...... +.++.+++.| ++..+||++...+.+.+.. ..++-|.+.....++..++.|...+++||
T Consensus 147 ~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sD 226 (337)
T cd01302 147 ANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASD 226 (337)
T ss_pred CcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecC
Confidence 3678888874333 3444555555 6778999987765544321 12222322333457788899999999999
Q ss_pred CCCCCCCh------HH-------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccE
Q 008993 450 WPVADINP------LC-------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADF 516 (547)
Q Consensus 450 ~~~~~~~~------~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADl 516 (547)
+....... +. ++...+... .....+.+++++++++++|.|||+++|+.+ .|+|++|+.|||
T Consensus 227 h~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~-----~~~~~~~~i~~~~~~~~~s~~pA~~~gl~~-~g~i~~G~~ADl 300 (337)
T cd01302 227 HAPHSKEEKESGKDIWKAPPGFPGLETRLPIL-----LTEGVKRGLSLETLVEILSENPARIFGLYP-KGTIAVGYDADL 300 (337)
T ss_pred CCCCCHHHhccCCCcccCCCCcccHHHHHHHH-----HHHHHhcCCCHHHHHHHHHHHHHHHcCCCC-CCccccCCcCCE
Confidence 75432100 00 000000000 001124579999999999999999999976 699999999999
Q ss_pred EEEcCCC
Q 008993 517 VILSTSS 523 (547)
Q Consensus 517 vv~d~d~ 523 (547)
+++|.+.
T Consensus 301 vi~d~~~ 307 (337)
T cd01302 301 VIVDPKK 307 (337)
T ss_pred EEEeCCC
Confidence 9999874
No 105
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.70 E-value=3.9e-16 Score=151.23 Aligned_cols=97 Identities=19% Similarity=0.149 Sum_probs=79.6
Q ss_pred ceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHH
Q 008993 381 FRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLC 459 (547)
Q Consensus 381 ~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~ 459 (547)
..++|+.++++++++++++.|+.+.+||.++.. ++ .+.+|+++|+++|+++++|||++. .+.+++.
T Consensus 166 ~~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~--------l~-----~g~~p~~~l~~~Gv~v~lGtD~~~~~~~~~~~ 232 (263)
T cd01305 166 DLLVHGTHLTDEDLELVRENGVPVVLCPRSNLY--------FG-----VGIPPVAELLKLGIKVLLGTDNVMVNEPDMWA 232 (263)
T ss_pred CEEEEcCCCCHHHHHHHHHcCCcEEEChhhHHH--------hC-----CCCCCHHHHHHCCCcEEEECCCCccCCCCHHH
Confidence 358999999999999999999999999985431 11 455689999999999999999754 4578999
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 008993 460 AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARA 498 (547)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~ 498 (547)
+++.+...... ...+++.++|+++|.|+|++
T Consensus 233 ~~~~~~~~~~~--------~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 233 EMEFLAKYSRL--------QGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred HHHHHHHHhcc--------cccCCHHHHHHHHhhccccC
Confidence 99988765431 11579999999999999974
No 106
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.62 E-value=2.9e-13 Score=129.28 Aligned_cols=68 Identities=19% Similarity=0.136 Sum_probs=54.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-C-hhhh---c--CCeEEEEEECcEEeC
Q 008993 479 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-D-FAAE---V--SASIEATYVSGVQAY 546 (547)
Q Consensus 479 ~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~-~~~~---~--~~~v~~v~v~G~~v~ 546 (547)
+.-++++++..+--.+|||.+|+.+++|.|.+|.+||+.|.|-+|.+ + ..+. . -.+...|+++|++|.
T Consensus 435 drE~t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~v~kaf~~A~ytlK~GeIvv 509 (575)
T COG1229 435 DRELTLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEKVEKAFRKAAYTLKGGEIVV 509 (575)
T ss_pred cccccHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHHHHHHHhheeEEecCceEEE
Confidence 44578999999999999999999999999999999999999999875 3 2222 1 336777888888763
No 107
>PRK06886 hypothetical protein; Validated
Probab=99.59 E-value=1.4e-13 Score=135.44 Aligned_cols=243 Identities=12% Similarity=0.125 Sum_probs=149.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCccch--hhHHH
Q 008993 237 IPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETW--SSLAD 314 (547)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 314 (547)
.+.++.++.++.+.+.++.+..+|++.+..+....+. .....++...++.++.. +.+.+.+..+ |.+.+ +...+
T Consensus 59 k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~-~~l~~~~a~~~~r~~~~--~~idlq~vaf-Pq~g~~~~~~~~ 134 (329)
T PRK06886 59 KRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPI-CEDRAIIAAHKAREVYK--HDIILKFANQ-TLKGVIEPTAKK 134 (329)
T ss_pred hccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCC-ccccHHHHHHHHHHHhc--CcceEEEEec-ChhhccCccHHH
Confidence 4567889999999999999999999999877644221 12234444444444443 4455555433 33221 11222
Q ss_pred HHHhcCCCCCCcEEEceEEEEEcCCcCcchhh---hhc--------eeEEecc-cHHHHHHHHHHHHHHHhcCCCCCCce
Q 008993 315 LINKTGHVLSDWVYLGGVKAFADGSLGSNSAL---FHE--------VAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFR 382 (547)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~--------v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (547)
.+.+.... .+ -.+|+..+.+......... ..+ +++|+.. .......++.+.+...+.|..+ +..
T Consensus 135 l~~~al~~-ad--vvGGiP~~~~~~~~~~~e~l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~l~~~~~~~Gl~g-rV~ 210 (329)
T PRK06886 135 WFDIGSEM-VD--MIGGLPYRDELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNTPKEKETEQLCDKTIEHGMQG-RVV 210 (329)
T ss_pred HHHHHHHh-CC--EEeCccCCcCCCCCCCHHHHHHHHHHHHHcCCCeEEeECCCCchhHHHHHHHHHHHHHcCCCC-CEE
Confidence 22221111 11 2234422222211111111 111 7777752 2222333444444444567655 799
Q ss_pred EeecCCCChhH-------HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCC----
Q 008993 383 IEHAQHLASGT-------AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP---- 451 (547)
Q Consensus 383 i~H~~~~~~~~-------l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~---- 451 (547)
+.|++.++..+ ++++++.|+.+.+||..+..... +......+++.+|+++|.++||++++|||+.
T Consensus 211 ~sH~~~L~~~~~~~~~~~i~~La~agi~Vv~~P~snl~l~~----~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~ 286 (329)
T PRK06886 211 AIHGISIGAHSKEYRYRLYQKMREADMMVIACPMAWIDSNR----KEDLMPFHNALTPADEMIPEGITVALGTDNICDYM 286 (329)
T ss_pred EEEeccccCcChhhHHHHHHHHHHcCCeEEECchhhhhhcc----ccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccC
Confidence 99999998775 89999999999999986532100 0000001267789999999999999999975
Q ss_pred --CCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 452 --VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 452 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.++.|++..++.+..... ..++.++++|+|.|+|+.||++
T Consensus 287 ~p~g~~Dmle~~~l~~~~~~-----------~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 287 VPLCEGDMWQELSLLAAGCR-----------FYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred CCCCCCCHHHHHHHHHHHcC-----------CCCHHHHHHHHhhhHHHHhCCC
Confidence 456799999998775432 1268999999999999999985
No 108
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.55 E-value=8.7e-15 Score=144.65 Aligned_cols=77 Identities=32% Similarity=0.360 Sum_probs=61.6
Q ss_pred hhchHHHHHHHCCCeeeecCCCCC----CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCC
Q 008993 429 RESYLFQSLLANNALLALGSDWPV----ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 504 (547)
Q Consensus 429 ~~~~~~~~l~~~Gv~~~~GTD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~ 504 (547)
....+++.++++|+++++|||+.. .+.+.+..+...+. ..|+++++|++++|.|||++||++++
T Consensus 224 ~~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~------------~~gl~~~~al~~~T~~pA~~lgl~~~ 291 (304)
T PF13147_consen 224 EDRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAV------------RAGLSPEEALRAATSNPARILGLDDD 291 (304)
T ss_dssp HHHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHH------------HTSSTHHHHHHHHTHHHHHHTTBTTT
T ss_pred hhhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHh------------hcCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 444578899999999999999876 44455555554432 35799999999999999999999878
Q ss_pred cccccCCCcccEE
Q 008993 505 VGSLSPGKIADFV 517 (547)
Q Consensus 505 ~GsI~~Gk~ADlv 517 (547)
+|+|++||+||||
T Consensus 292 ~G~i~~G~~ADlv 304 (304)
T PF13147_consen 292 KGSIAPGKDADLV 304 (304)
T ss_dssp SSSTSTTSB-EEE
T ss_pred CccCCCCCCCCcC
Confidence 9999999999997
No 109
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.47 E-value=1.1e-11 Score=123.56 Aligned_cols=152 Identities=12% Similarity=0.150 Sum_probs=89.3
Q ss_pred CCCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH----hhChhhhhhhchHHHHHHHCCCeeeecCCC
Q 008993 378 DQRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK----KLGVDRAERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 378 ~~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~----~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
+.+.++.|.+.... +.++..++.| ++..+||+++..+.+.+.. ..++-|.+.....+.+.+. ...+++||+
T Consensus 148 g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~~k~~PPLR~~~dr~aL~~~l~--~id~i~SDH 225 (344)
T cd01316 148 NRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPRGQYEVRPFLPTREDQEALWENLD--YIDCFATDH 225 (344)
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhcCCceeCCCCcCHHHHHHHHHHHh--cCCEEEcCC
Confidence 34788888876433 3334445555 7889999999877665422 2222232111222333332 367899996
Q ss_pred CCCCC------------ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEE
Q 008993 451 PVADI------------NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 518 (547)
Q Consensus 451 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv 518 (547)
..-.. .-.+.+...+.. ...+.++++++++++.+.|||+++|+.. + .+||++
T Consensus 226 aP~~~~~K~~~~a~~G~~g~e~~lpl~~~--------~v~~~~i~l~~l~~~~s~nPAk~~gl~~-------~-~~~lvi 289 (344)
T cd01316 226 APHTLAEKTGNKPPPGFPGVETSLPLLLT--------AVHEGRLTIEDIVDRLHTNPKRIFNLPP-------Q-SDTYVE 289 (344)
T ss_pred CCCCHHHhcCCCCCCCcccHHHHHHHHHH--------HHHcCCCCHHHHHHHHHHhHHHHhCCCC-------C-CCCEEE
Confidence 53211 111111111110 1134479999999999999999999864 2 347999
Q ss_pred EcCC-CCC-Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 519 LSTS-SWE-DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 519 ~d~d-~~~-~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
+|.+ .+. +...+ ...+|..|+++|++||+
T Consensus 290 ~d~~~~~~v~~~~~~s~~~~sp~~G~~l~G~v~~ti~rG~~v~~ 333 (344)
T cd01316 290 VDLDEEWTIPKNPLQSKKGWTPFEGKKVKGKVQRVVLRGETAFI 333 (344)
T ss_pred EeCCCcEEEChhhccccCCCCCCCCCEEeeEEEEEEECCEEEEE
Confidence 9954 221 11111 16699999999999873
No 110
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.35 E-value=3.5e-11 Score=109.18 Aligned_cols=60 Identities=38% Similarity=0.471 Sum_probs=56.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 478 PSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 478 ~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+..+-|.+-||++||..||+.||+++.+|+|..|..||||++|.+. +|+.||+.|+.||.
T Consensus 345 kATgCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~l----------~V~aT~isG~~V~~ 404 (407)
T KOG3892|consen 345 KATGCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDSL----------HVQATYISGELVWQ 404 (407)
T ss_pred HhcCCcHHHHHhhhccChHHhhccccccccccccccCceEEEccce----------EEEEEEEccEEEEe
Confidence 5667899999999999999999999999999999999999999776 99999999999984
No 111
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.27 E-value=2e-10 Score=111.76 Aligned_cols=224 Identities=24% Similarity=0.239 Sum_probs=133.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCccc-------hhh
Q 008993 239 EVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET-------WSS 311 (547)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 311 (547)
..+.++.+.........+.+.|+|++.++....+...... ......+.+.+..++.+.......... .+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (275)
T cd01292 27 ELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKA---AIEAVAEAARASAGIRVVLGLGIPGVPAAVDEDAEAL 103 (275)
T ss_pred ccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccch---HHHHHHHHHHHhcCeeeEEeccCCCCccccchhHHHH
Confidence 3456677788888899999999999999875443322111 222333333322122333222222111 112
Q ss_pred HHHHHHhcCCCCCCcEEEceEEEEEcCCcC-cchhhhhc-----------eeEEecccHH----HHHHHHHHHHHHHhcC
Q 008993 312 LADLINKTGHVLSDWVYLGGVKAFADGSLG-SNSALFHE-----------VAIHAIGDRA----NDLVLDMYKSVVVTTG 375 (547)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~-----------v~~H~~~~~~----~~~~~~~~~~~~~~~~ 375 (547)
..+.+..... ....+++........ .....+.. +.+|+..... +..+++...
T Consensus 104 ~~~~i~~~~~-----~~~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~~~~~~~~~~~~~~------- 171 (275)
T cd01292 104 LLELLRRGLE-----LGAVGLKLAGPYTATGLSDESLRRVLEEARKLGLPVVIHAGELPDPTRALEDLVALLR------- 171 (275)
T ss_pred HHHHHHHHHh-----cCCeeEeeCCCCCCCCCCcHHHHHHHHHHHHcCCeEEEeeCCcccCccCHHHHHHHHh-------
Confidence 2233332211 122344433222211 01111111 8888764332 333333221
Q ss_pred CCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--
Q 008993 376 KRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-- 453 (547)
Q Consensus 376 ~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-- 453 (547)
. +.+..+.|+...+++.++.+++.|+.+.+||.++.... ... ....+++.+.++|+++++|||++..
T Consensus 172 ~-~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~g~~~~lgTD~~~~~~ 240 (275)
T cd01292 172 L-GGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYLLG---------RDG-EGAEALRRLLELGIRVTLGTDGPPHPL 240 (275)
T ss_pred c-CCCEEEECCccCCHHHHHHHHHcCCeEEECCccccccc---------CCc-CCcccHHHHHHCCCcEEEecCCCCCCC
Confidence 1 45889999999999999999999999999998764321 011 4456789999999999999999875
Q ss_pred CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 008993 454 DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARA 498 (547)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~ 498 (547)
..+++..++.+.... ..+++++++++++|.|||++
T Consensus 241 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 241 GTDLLALLRLLLKVL----------RLGLSLEEALRLATINPARA 275 (275)
T ss_pred CCCHHHHHHHHHHHH----------hcCCCHHHHHHHHhccccCC
Confidence 467888887766542 22389999999999999973
No 112
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.16 E-value=2.1e-11 Score=91.32 Aligned_cols=44 Identities=45% Similarity=0.797 Sum_probs=34.5
Q ss_pred EEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccc
Q 008993 67 MAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFI 113 (547)
Q Consensus 67 I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~ 113 (547)
|+|+||||++|++..... ....++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELP---ADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCTT---STCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCCC---CCCCEEEECCCCEEeCCeEeeeeccc
Confidence 789999999997554331 24567899999999999999999976
No 113
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.08 E-value=9.8e-09 Score=103.09 Aligned_cols=123 Identities=15% Similarity=0.084 Sum_probs=78.0
Q ss_pred CCceEeecCCCChhHHHHHHhC--CcEEEecCccccCChhHHHH--------hhChhhhhhhchHHHHHHHCCCee-eec
Q 008993 379 QRFRIEHAQHLASGTAARFGDQ--GIVASMQPQHLLDDADSARK--------KLGVDRAERESYLFQSLLANNALL-ALG 447 (547)
Q Consensus 379 ~~~~i~H~~~~~~~~l~~~~~~--g~~~~~~p~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~l~~~Gv~~-~~G 447 (547)
.+.++.|.. +.+.++.+++. .++..+||+++..+.+.+.. ..++-|.+.....+.+.+..|... .++
T Consensus 163 ~~v~i~Hvs--t~~~~~~i~~ak~~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~ 240 (335)
T cd01294 163 LKIVLEHIT--TADAVEYVKSCNENVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLG 240 (335)
T ss_pred CeEEEeccc--HHHHHHHHHhCCCCcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEE
Confidence 477888885 45666666543 59999999998877655432 122323223334466777889988 599
Q ss_pred CCCCCCC------------CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCC
Q 008993 448 SDWPVAD------------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 512 (547)
Q Consensus 448 TD~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk 512 (547)
||+.... ...++.+...+.. ..+ .++++++++++.+.||||+||+..++|+|.+|+
T Consensus 241 SDHaP~~~~~K~~~~g~~Gi~~~~~~l~~~~~--------~~~-~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 241 SDSAPHPKSNKESSCGCAGIFSAPIALPYLAE--------VFE-EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred CCCCCCCCccccCCCCCccccCHHHHHHHHHH--------HHh-ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 9974321 1111111111111 112 379999999999999999999976666666664
No 114
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.00 E-value=2.8e-08 Score=99.50 Aligned_cols=230 Identities=15% Similarity=0.063 Sum_probs=135.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEeCccC-----CCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCc-cchhhHH
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVDFGRY-----YPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL-ETWSSLA 313 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 313 (547)
.++++++...+..+.++.+.|++.+- +... ..+.+.+.-.+...+.+.++.++.++.+++...... ...+...
T Consensus 66 ~~~ed~~~~~~~~~~e~~~~Gvt~~E-~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~gi~~~l~~~~~~~~~~~~~~ 144 (325)
T cd01320 66 QTEEDFERLAYEYLEDAAADGVVYAE-IRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEFGIKARLILCGLRHLSPESAQ 144 (325)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEE-EEeCchhhccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEecCCCCHHHHH
Confidence 57899999999999999999998653 2111 111111111222344555555555555555543222 1222222
Q ss_pred HHHHhcCCCCCCcEEEceEEEEEcCCcC---cchhhhhc-------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceE
Q 008993 314 DLINKTGHVLSDWVYLGGVKAFADGSLG---SNSALFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRI 383 (547)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 383 (547)
+.++...+...+ ...|+.+..+.... .....+.. +.+|+.+......+.++++.+ + ..++
T Consensus 145 ~~~~~~~~~~~~--~vvg~~l~~~~~~~~~~~~~~~~~~A~~~g~~v~~H~~E~~~~~~~~~a~~~~----g----~~~i 214 (325)
T cd01320 145 ETLELALKYRDK--GVVGFDLAGDEVGFPPEKFVRAFQRAREAGLRLTAHAGEAGGPESVRDALDLL----G----AERI 214 (325)
T ss_pred HHHHHHHhccCC--CEEEeecCCCCCCCCHHHHHHHHHHHHHCCCceEEeCCCCCCHHHHHHHHHHc----C----Cccc
Confidence 332221111111 12333332221111 11111111 899986544444444555433 2 2368
Q ss_pred eecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC-CCChHHH
Q 008993 384 EHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCA 460 (547)
Q Consensus 384 ~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~~~~~ 460 (547)
.|+.+++ +++++++++.|+.+.+||.++... +.... ....|++.|+++|+++++|||.+.. +.+++.+
T Consensus 215 ~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l--------~~~~~-~~~~p~~~l~~~Gv~v~lgTD~~~~~~~~~~~e 285 (325)
T cd01320 215 GHGIRAIEDPELVKRLAERNIPLEVCPTSNVQT--------GAVKS-LAEHPLRELLDAGVKVTINTDDPTVFGTYLTDE 285 (325)
T ss_pred chhhccCccHHHHHHHHHcCCeEEECCCccccc--------cccCC-cccChHHHHHHCCCEEEECCCCCcccCCCHHHH
Confidence 9999994 668999999999999999876531 21111 3357899999999999999998764 3567777
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 461 IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
+..+... .++++.+ |..+|.|+++...+.
T Consensus 286 ~~~~~~~------------~~l~~~e-l~~~~~na~~~~f~~ 314 (325)
T cd01320 286 YELLAEA------------FGLTEEE-LKKLARNAVEASFLS 314 (325)
T ss_pred HHHHHHH------------cCCCHHH-HHHHHHHHHHHhCCC
Confidence 7776543 3689999 666889999988764
No 115
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=98.88 E-value=1.4e-07 Score=94.25 Aligned_cols=231 Identities=16% Similarity=0.076 Sum_probs=132.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEeCccCC-----CCcccccchhHHHHHHHHHhhCCCCeeEEEEcc-CccchhhHH
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVDFGRYY-----PGESVQLSWEDFADVYQWASYSEKMKIRVCLFF-PLETWSSLA 313 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 313 (547)
.+.+++....+..+.++.+.|++ ..++.... .+.+.+...+...+.+.++.++.++..++.... .....+...
T Consensus 65 ~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi~~~li~~~~r~~~~~~~~ 143 (324)
T TIGR01430 65 RTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGIKSRLILCGMRHKQPEAAE 143 (324)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEEeCCCCHHHHH
Confidence 57788999999999999999995 44443211 111111122223445555555555555444332 222222222
Q ss_pred HHHHhcCCCCCCcEEEceEEEEEcCC---cCcchhhhhc-------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceE
Q 008993 314 DLINKTGHVLSDWVYLGGVKAFADGS---LGSNSALFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRI 383 (547)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 383 (547)
+.++......... .-|+.+..+.. .......+.. +.+|+...........+++.. + ..++
T Consensus 144 ~~~~~~~~~~~~~--vvg~~l~~~e~~~~~~~~~~~~~~A~~~g~~i~~Ha~E~~~~~~~~~~~~~~----g----~~ri 213 (324)
T TIGR01430 144 ETLELAKPYKEQT--IVGFGLAGDERGGPPPDFVRAFAIARELGLHLTVHAGELGGPESVREALDDL----G----ATRI 213 (324)
T ss_pred HHHHHHHhhccCc--EEEecCCCCCCCCCHHHHHHHHHHHHHCCCCeEEecCCCCChHHHHHHHHHc----C----chhc
Confidence 2222211111111 11222211111 0011111101 888875321122223333222 2 2478
Q ss_pred eecCCC--ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC-CCChHHH
Q 008993 384 EHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCA 460 (547)
Q Consensus 384 ~H~~~~--~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~~~~~ 460 (547)
.|+.++ ++++++.+++.|+.+.+||.++..... .+. ....|++.|+++|+++++|||.+.. +.++..+
T Consensus 214 ~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~-----~~~----~~~~pi~~l~~~Gv~v~igTD~~~~~~~~l~~e 284 (324)
T TIGR01430 214 GHGVRALEDPELLKRLAQENITLEVCPTSNVALGV-----VKS----LAEHPLRRFLEAGVKVTLNSDDPAYFGSYLTEE 284 (324)
T ss_pred chhhhhccCHHHHHHHHHcCceEEECCcccccccc-----cCC----cccChHHHHHHCCCEEEECCCCCcccCCCHHHH
Confidence 999999 667899999999999999998763220 000 2346899999999999999998754 3478888
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 461 IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
+..++.. .++++.+ |+++|.|+++.+-+++
T Consensus 285 ~~~a~~~------------~~l~~~e-l~~~~~na~~~~f~~~ 314 (324)
T TIGR01430 285 YEIAAKH------------AGLTEEE-LKQLARNALEGSFLSD 314 (324)
T ss_pred HHHHHHH------------cCCCHHH-HHHHHHHHHHHhCCCH
Confidence 8877643 4799999 8899999999887653
No 116
>PRK09358 adenosine deaminase; Provisional
Probab=98.74 E-value=3.3e-07 Score=92.33 Aligned_cols=230 Identities=17% Similarity=0.102 Sum_probs=131.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCccEEEeCcc----CCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCc-cchhhHH
Q 008993 239 EVSVDERREALLRASNLALSRGVTTVVDFGR----YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL-ETWSSLA 313 (547)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 313 (547)
..++++++.....++.++.+.|++.+.-... ...+.+.+...+...+...++.++.++..++...... ...+...
T Consensus 73 ~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~~~gi~~~li~~~~r~~~~~~~~ 152 (340)
T PRK09358 73 LQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEAEFGISVRLILCFMRHFGEEAAA 152 (340)
T ss_pred hCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHHhcCceEEEEEEecCCCCHHHHH
Confidence 3678999999999999999999987532211 0112222223333455555555555555555543221 1122212
Q ss_pred HHHHhcCC-CCCCcEEEceEEEEEcCCcCcch-hhhhc-----------eeEEecccHHHHHHHHHHHHHHHhcCCCCCC
Q 008993 314 DLINKTGH-VLSDWVYLGGVKAFADGSLGSNS-ALFHE-----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQR 380 (547)
Q Consensus 314 ~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~-~~~~~-----------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (547)
+.+..... ...+. .-|+.+..+. ...+ ..+.. +++|+..........++++.+ + .
T Consensus 153 ~~~~~~~~~~~~~~--vvg~~l~g~e--~~~~~~~~~~~~~~A~~~g~~~~~H~~E~~~~~~~~~al~~l----g----~ 220 (340)
T PRK09358 153 RELEALAARYRDDG--VVGFDLAGDE--LGFPPSKFARAFDRARDAGLRLTAHAGEAGGPESIWEALDEL----G----A 220 (340)
T ss_pred HHHHHHHHHhcCCc--EEEEeCCCcC--CCCCHHHHHHHHHHHHHCCCCeEEcCCCCCchhHHHHHHHHc----C----C
Confidence 22111111 01111 1122111111 1111 11111 888875322222223333321 2 2
Q ss_pred ceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCCh
Q 008993 381 FRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINP 457 (547)
Q Consensus 381 ~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~ 457 (547)
.++.|+.+++ ++.++++++.|+.+.+||.++.... .... ....|+++|+++|+++++|||.+. .+.++
T Consensus 221 ~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~--------~~~~-~~~~pi~~l~~~Gv~v~lgTD~~~~~~~~l 291 (340)
T PRK09358 221 ERIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTG--------AVPS-LAEHPLKTLLDAGVRVTINTDDPLVFGTTL 291 (340)
T ss_pred cccchhhhhccCHHHHHHHHHcCCeEEECCCcccccc--------ccCC-cccChHHHHHHCCCEEEECCCCCcccCCCH
Confidence 3689999985 5579999999999999999875221 1000 234689999999999999999875 34688
Q ss_pred HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 458 LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
+.++..+.. ..++++++ +..++.|+.+..-++
T Consensus 292 ~~e~~~~~~------------~~~l~~~e-l~~l~~nai~~sf~~ 323 (340)
T PRK09358 292 TEEYEALAE------------AFGLSDED-LAQLARNALEAAFLS 323 (340)
T ss_pred HHHHHHHHH------------HhCCCHHH-HHHHHHHHHHHHCCC
Confidence 888887653 34789999 566678988876654
No 117
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=98.32 E-value=8.3e-05 Score=74.46 Aligned_cols=126 Identities=14% Similarity=0.117 Sum_probs=76.9
Q ss_pred CCceEeecCCCChhHHHHHH--hCCcEEEecCccccCChhHHHH--------hhChhhhhhhchHHHHHHHCCCee-eec
Q 008993 379 QRFRIEHAQHLASGTAARFG--DQGIVASMQPQHLLDDADSARK--------KLGVDRAERESYLFQSLLANNALL-ALG 447 (547)
Q Consensus 379 ~~~~i~H~~~~~~~~l~~~~--~~g~~~~~~p~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~l~~~Gv~~-~~G 447 (547)
.+.++.|... .+.++.++ +..++..+||+++..+.+.+.. ..++-|.+.....+.+.+..|... .++
T Consensus 166 ~~~~i~H~st--~~~~~~i~~a~~~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~ 243 (341)
T TIGR00856 166 LKVVLEHITT--KDAIDYVEDGNNRLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLG 243 (341)
T ss_pred CeEEEEecCc--HHHHHHHHHcCCCEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEe
Confidence 3677777754 34444333 2348899999998876665432 122333333334566778889998 699
Q ss_pred CCCCCCCCC---------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEE
Q 008993 448 SDWPVADIN---------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVI 518 (547)
Q Consensus 448 TD~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv 518 (547)
||+...... -..++...+.... ..+ .. ++++++++++.+.||||++|++ .| .|||+|
T Consensus 244 SDHaP~~~~~K~~~~~~~G~~g~e~~l~~~~----~~~-~~-~~~l~~~v~~~s~nPAk~~gl~--~~------dAdi~~ 309 (341)
T TIGR00856 244 TDSAPHARHRKESSCGCAGCFSAPTALPSYA----EVF-EE-MNALENLEAFCSDNGPQFYGLP--VN------STKIEL 309 (341)
T ss_pred CCCCCCChhHcCCCCCCCCcccHHHHHHHHH----HHH-hc-CCCHHHHHHHHhHhHHHHhCCC--CC------CceEEE
Confidence 997543210 0111111111100 001 22 6899999999999999999993 24 899999
Q ss_pred Ec
Q 008993 519 LS 520 (547)
Q Consensus 519 ~d 520 (547)
++
T Consensus 310 ~~ 311 (341)
T TIGR00856 310 VK 311 (341)
T ss_pred Ee
Confidence 95
No 118
>PTZ00124 adenosine deaminase; Provisional
Probab=98.27 E-value=0.0001 Score=73.87 Aligned_cols=225 Identities=13% Similarity=0.041 Sum_probs=129.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCccC-----CCCcccccchhHHHHHHHHHhh--CCCCeeEEEEccCc-cchh--
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGRY-----YPGESVQLSWEDFADVYQWASY--SEKMKIRVCLFFPL-ETWS-- 310 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~-- 310 (547)
+.+++++...+.++.+.+.|+..+.-.-.. ..+.+.++-++...+.+++..+ +.++.+++.+.... ...+
T Consensus 100 t~~dl~r~a~e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~~~~vv~av~~g~~~a~~~~~~gI~~~lI~~~~R~~~~e~a 179 (362)
T PTZ00124 100 DYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKHNLDIDLIHQAIVKGIKEAVELLDHKIEVGLLCIGDTGHDAAPI 179 (362)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEcCchhhhcCCCCCHHHHHHHHHHHHHHHHhccCCCceEeEEEEecCCCCHHHH
Confidence 567788888888999999999766543211 1122223333344455555555 34555555544321 1222
Q ss_pred -hHHHHHHhcCCCCCCcEEEceEEEEEcCC-cCcchhhhhc-------eeEEeccc---HHHHHHHHHHHHHHHhcCCCC
Q 008993 311 -SLADLINKTGHVLSDWVYLGGVKAFADGS-LGSNSALFHE-------VAIHAIGD---RANDLVLDMYKSVVVTTGKRD 378 (547)
Q Consensus 311 -~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~-------v~~H~~~~---~~~~~~~~~~~~~~~~~~~~~ 378 (547)
+..+....... . .-|+.+-.+.. ...+...+.. +.+|+... .......+++..+
T Consensus 180 ~e~~~~a~~~~~----~--vvGiDLaG~E~~~~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~v~~ai~~l-------- 245 (362)
T PTZ00124 180 KESADFCLKHKA----D--FVGFDHAGHEVDLKPFKDIFDYVREAGVNLTVHAGEDVTLPNLNTLYSAIQVL-------- 245 (362)
T ss_pred HHHHHHHHhccC----C--eEEEeccCCCCCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcchhHHHHHHHh--------
Confidence 33333332111 1 22333332221 1112222211 88998531 1223334444333
Q ss_pred CCceEeecCCC--ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC-CC
Q 008993 379 QRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DI 455 (547)
Q Consensus 379 ~~~~i~H~~~~--~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~ 455 (547)
...+|.|+..+ +++.++.+++.++.+.+||.++.... .+.. ....|++.|+++|++++++||.|.. +.
T Consensus 246 ~~~RIGHG~~~~~d~~l~~~l~~~~I~lEvCPtSN~~~~-----~v~~----~~~HPi~~l~~~Gv~v~InTDDp~~~~t 316 (362)
T PTZ00124 246 KVKRIGHGIRVAESQELIDMVKEKDILLEVCPISNVLLN-----NAKS----MDTHPIRKLYDAGVKVSVNSDDPGMFLT 316 (362)
T ss_pred CCCccccccccCCCHHHHHHHHHcCCeEEECCcchhhhh-----cCCc----hhhHHHHHHHHCCCcEEEeCCCccccCC
Confidence 14589999987 57889999999999999999886221 1111 2235899999999999999998854 45
Q ss_pred ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 456 NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+...++..+. ...+++.++..++ +.|+.++.-+
T Consensus 317 ~l~~Ey~~~~------------~~~gls~~~l~~l-~~nai~asF~ 349 (362)
T PTZ00124 317 NINDDYEELY------------THLNFTLADFMKM-NEWALEKSFL 349 (362)
T ss_pred ChhHHHHHHH------------HHcCCCHHHHHHH-HHHHHHHhcC
Confidence 6666666544 3457899887776 5566655444
No 119
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=98.25 E-value=6e-05 Score=74.48 Aligned_cols=226 Identities=14% Similarity=0.080 Sum_probs=132.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEeCccCC----C-CcccccchhHHHHHHHHHhhCCC-CeeEEEEccCcc-chh--
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVDFGRYY----P-GESVQLSWEDFADVYQWASYSEK-MKIRVCLFFPLE-TWS-- 310 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-- 310 (547)
.+.+.+.+.+.+.++.+.+.|+..+.-.-... . +.+.++-++...+.+++..+..+ +.++........ ..+
T Consensus 39 ~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~lI~~~~R~~~~~~~ 118 (305)
T cd00443 39 QKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQWFPPIKVRLILSVDRRGPYVQN 118 (305)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhcCcccCCCHHHHHHHHHHHHHHHHHHcCCeeEeEEEEEeCCCChhhh
Confidence 34577788888889999999997665422111 1 22333344455666666666554 555555433221 222
Q ss_pred -----hHHHHHHhcCCCCCCcEEEceEEEEEcCCcC-----cchhhh--------hceeEEecccHHHHHHHHHHHHHHH
Q 008993 311 -----SLADLINKTGHVLSDWVYLGGVKAFADGSLG-----SNSALF--------HEVAIHAIGDRANDLVLDMYKSVVV 372 (547)
Q Consensus 311 -----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~--------~~v~~H~~~~~~~~~~~~~~~~~~~ 372 (547)
+..+...... + ..-|+.+-.+.... .+...+ ..+.+|+..........+++...
T Consensus 119 ~~~~~~~~~l~~~~~----~--~vvG~Dl~g~E~~~~~~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~~~v~~~~~~~-- 190 (305)
T cd00443 119 YLVASEILELAKFLS----N--YVVGIDLVGDESKGENPLRDFYSYYEYARRLGLLGLTLHCGETGNREELLQALLLL-- 190 (305)
T ss_pred hhhHHHHHHHHHHhc----C--CEEEEEcCCCCCCCCCCHHHHHHHHHHHHHcCCcceEEeecCCCChHHHHHHHHhc--
Confidence 2222222211 1 13444443332221 111111 22788875332333333333221
Q ss_pred hcCCCCCCceEeecCCCCh--hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCC
Q 008993 373 TTGKRDQRFRIEHAQHLAS--GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 373 ~~~~~~~~~~i~H~~~~~~--~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
..+|.|+..+.+ +.++++++.++.+.+||.++.... .... ....|++.|+++|++++++||.
T Consensus 191 -------~~RIgHg~~~~~~p~~~~~l~~~~i~ie~CP~SN~~~~--------~~~~-~~~hP~~~~~~~G~~v~i~TDd 254 (305)
T cd00443 191 -------PDRIGHGIFLLKHPELIYLVKLRNIPIEVCPTSNVVLG--------TVQS-YEKHPFMRFFKAGLPVSLSTDD 254 (305)
T ss_pred -------cceeeceEecCCCHHHHHHHHHcCCEEEECcchhhhhc--------CCCC-hhhChHHHHHHCCCeEEEeCCC
Confidence 559999999887 999999999999999999875221 1110 2235799999999999999999
Q ss_pred CCC-CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 451 PVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 451 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
+.. +.+...++..+.. ..+++.++..+++ .|+-+...++
T Consensus 255 ~~~~~~~l~~E~~~~~~------------~~~l~~~~l~~l~-~nsi~~sf~~ 294 (305)
T cd00443 255 PGIFGTSLSEEYSLAAK------------TFGLTFEDLCELN-RNSVLSSFAK 294 (305)
T ss_pred CcccCCChHHHHHHHHH------------HcCcCHHHHHHHH-HHHHHHhcCC
Confidence 864 4577777776553 3468988866655 5666655543
No 120
>PRK05451 dihydroorotase; Provisional
Probab=98.07 E-value=6.9e-05 Score=75.39 Aligned_cols=126 Identities=13% Similarity=0.146 Sum_probs=79.7
Q ss_pred CCCceEeecCCCChhHHHHHHh--CCcEEEecCccccCChhHHH--------HhhChhhhhhhchHHHHHHHCCCee-ee
Q 008993 378 DQRFRIEHAQHLASGTAARFGD--QGIVASMQPQHLLDDADSAR--------KKLGVDRAERESYLFQSLLANNALL-AL 446 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~~--~g~~~~~~p~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~l~~~Gv~~-~~ 446 (547)
+.+.++.|.. +.+.++.+++ .+++..+||+++..+.+.+. +..++-|.+.....+.+.+..|... .+
T Consensus 168 g~~lhI~Hls--t~~~~e~i~~a~~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i 245 (345)
T PRK05451 168 KLKIVFEHIT--TKDAVDYVREANDNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFL 245 (345)
T ss_pred CCcEEEEecC--cHHHHHHHHhcCCCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEE
Confidence 3477888885 4555555443 36888999999876655433 1223444434445577888899999 79
Q ss_pred cCCCCCCC---------CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCC
Q 008993 447 GSDWPVAD---------INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 511 (547)
Q Consensus 447 GTD~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~G 511 (547)
|||+.... ...+.....++.... ..+ ... .++++++++.+.|||+++|+..++|+|.+|
T Consensus 246 ~SDHaP~~~~~K~~~~G~~gi~~~~~g~~~~~----~~~-~~~-~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 246 GTDSAPHARHAKESACGCAGIFSAPAALELYA----EVF-EEA-GALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred eCCCCCCChHHhCCCCCCCchhhHHHHHHHHH----HHH-HcC-CCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 99975431 111211111111000 001 122 389999999999999999998889999888
No 121
>PLN02599 dihydroorotase
Probab=97.97 E-value=0.0011 Score=66.73 Aligned_cols=123 Identities=14% Similarity=0.129 Sum_probs=70.5
Q ss_pred CCCceEeecCCCChhHHHHHH--hC-CcEEEecCccccCChhHHH--------HhhChhhhhhhchHHHHHHHCCCe-ee
Q 008993 378 DQRFRIEHAQHLASGTAARFG--DQ-GIVASMQPQHLLDDADSAR--------KKLGVDRAERESYLFQSLLANNAL-LA 445 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~--~~-g~~~~~~p~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~l~~~Gv~-~~ 445 (547)
+.+.+++|.+. .+.++.++ +. .++..+||+++..+.+.+. +..++-|.+.....+++.+..|.. ..
T Consensus 186 g~kI~i~HiSt--~~~ve~v~~ak~~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~ 263 (364)
T PLN02599 186 QLKIVMEHITT--MDAVEFVESCGDGNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFF 263 (364)
T ss_pred CCeEEEEecCh--HHHHHHHHhccCCCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEE
Confidence 34677888754 34444333 23 6889999999876655432 122233332333456777888995 79
Q ss_pred ecCCCCCCCCC---------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccc
Q 008993 446 LGSDWPVADIN---------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 508 (547)
Q Consensus 446 ~GTD~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI 508 (547)
+|||+..-... -.+....++..+. ....+.+ ++++++++.+.|||+++|++..+|+|
T Consensus 264 i~SDHaPh~~~~K~~~~g~~Gi~~~~~~l~~l~-----~~~~~~g-~l~~l~~~~S~npA~~~gL~~~kg~i 329 (364)
T PLN02599 264 LGTDSAPHPKRAKEASCGCAGIYSAPVALSLYA-----KAFEEAG-ALDKLEAFTSFNGPDFYGLPRNTSTI 329 (364)
T ss_pred EecCCCCCChHHhcCCCCCCCcccHHHHHHHHH-----HHHHhcC-CHHHHHHHHhHHHHHHhCCCCCCCeE
Confidence 99996532211 0111000111000 0012234 89999999999999999996445653
No 122
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=97.89 E-value=0.0013 Score=65.88 Aligned_cols=229 Identities=13% Similarity=0.008 Sum_probs=125.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCccC-------CCCcccccchhHHHHHHHHHhhCC--CCeeEEEEccC-ccchh
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGRY-------YPGESVQLSWEDFADVYQWASYSE--KMKIRVCLFFP-LETWS 310 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~ 310 (547)
+.+.++..+.+.++.+.+.|+..+.-.-.. ..+.+.++-++...+..+.+.+.. ++.+++.+... ..+.+
T Consensus 64 ~~~~~~~~~~~~~~d~~~dgV~Y~Eir~~P~~~~~~~~~g~~~~~v~~av~~~~~~~~~~~~~~i~v~lI~~~~R~~~~e 143 (345)
T cd01321 64 YLPIFRDYYRRLLEELYEDNVQYVELRSSFSPLYDLDGREYDYEETVQLLEEVVEKFKKTHPDFIGLKIIYATLRNFNDS 143 (345)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeecchHHHHccCCCCCHHHHHHHHHHHHHHHHHhCCCCceEEEEEEecCCCCHH
Confidence 446677788888899999999776653221 111222222222333334444443 45555554332 22222
Q ss_pred ---hHHHHHHhcCCCCCCcEEEceEEEEEcCC----cCcchhhh---------hceeEEecccH-----HHHHHHHHHHH
Q 008993 311 ---SLADLINKTGHVLSDWVYLGGVKAFADGS----LGSNSALF---------HEVAIHAIGDR-----ANDLVLDMYKS 369 (547)
Q Consensus 311 ---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~---------~~v~~H~~~~~-----~~~~~~~~~~~ 369 (547)
+..+..........+ ..-|+.+..+.. ...+...+ ..+.+|+.... ....+.+++ .
T Consensus 144 ~~~e~~~~a~~~~~~~~~--~VvGidL~G~E~~~~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~~~~~~v~~al-~ 220 (345)
T cd01321 144 EIKESMEQCLNLKKKFPD--FIAGFDLVGQEDAGRPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGTETDENLVDAL-L 220 (345)
T ss_pred HHHHHHHHHHHHHHhCCC--eEEEEecCCCccCCCCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCCCChhHHHHHH-H
Confidence 233333221110111 123333332221 11111111 12788875221 122334444 1
Q ss_pred HHHhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeec
Q 008993 370 VVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALG 447 (547)
Q Consensus 370 ~~~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~G 447 (547)
+ ...+|.|+..+. ++.++.+++.++.+.+||.++.... .+.. ...-|++.|+++|+++++.
T Consensus 221 l--------g~~RIGHG~~~~~dp~ll~~l~~~~I~lEvCPtSN~~~~-----~v~~----~~~HPl~~ll~~Gv~vtin 283 (345)
T cd01321 221 L--------NTKRIGHGFALPKHPLLMDLVKKKNIAIEVCPISNQVLG-----LVSD----LRNHPAAALLARGVPVVIS 283 (345)
T ss_pred h--------CCCcCccccccCcCHHHHHHHHHcCCeEEECcchhhhhc-----cccc----hhhChHHHHHHCCCeEEEe
Confidence 1 145899999775 7889999999999999999876221 1111 2235899999999999999
Q ss_pred CCCCCC-CC-ChHHHHHHHHcccCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHcccC
Q 008993 448 SDWPVA-DI-NPLCAIRTAMKRIPPGWDNAWIPSER---ISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 448 TD~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~al~~aT~n~A~~lgl~ 502 (547)
||.|.. +. +...+.+.+.. ..+ ++.++ +...+.|+.++.-++
T Consensus 284 TDDp~~f~t~~l~~Ey~~~~~------------~~g~~~l~~~~-l~~l~~nsi~~sF~~ 330 (345)
T cd01321 284 SDDPGFWGAKGLSHDFYQAFM------------GLAPADAGLRG-LKQLAENSIRYSALS 330 (345)
T ss_pred CCCcchhCCCCchHHHHHHHH------------HhccCCCCHHH-HHHHHHHHHHHHCCC
Confidence 998864 34 56666665442 234 88888 555566777766554
No 123
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=97.77 E-value=0.0022 Score=61.55 Aligned_cols=98 Identities=15% Similarity=0.083 Sum_probs=61.2
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCC--CeeeecCCCCCCCC--
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN--ALLALGSDWPVADI-- 455 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~G--v~~~~GTD~~~~~~-- 455 (547)
...+.|+...+.+.+..+.+.|+.+.+......... ..++++.+.. =++.++||.|....
T Consensus 146 ~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------~~~~~~i~~~~~dril~~TD~p~~~~~~ 209 (252)
T TIGR00010 146 VGGVLHCFTGDAELAKKLLDLGFYISISGIVTFKNA----------------KSLREVVRKIPLERLLVETDSPYLAPVP 209 (252)
T ss_pred CCEEEEccCCCHHHHHHHHHCCCeEeeceeEecCCc----------------HHHHHHHHhCCHHHeEecccCCCCCCCC
Confidence 467779987777888888889999888864322111 1234444443 27899999875321
Q ss_pred -----ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 456 -----NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 456 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+....+...... +....|++++++.++.+.|+++.+++
T Consensus 210 ~~~~~~~p~~i~~~~~~--------~a~~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 210 YRGKRNEPAFVRYTVEA--------IAEIKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred CCCCCCCChhHHHHHHH--------HHHHhCcCHHHHHHHHHHHHHHHhCc
Confidence 111111111100 01223799999999999999999975
No 124
>PRK10812 putative DNAse; Provisional
Probab=97.73 E-value=0.0051 Score=59.28 Aligned_cols=123 Identities=17% Similarity=0.134 Sum_probs=76.5
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +.+.+++.+++. +... ...+.|+..-+.+.++++.+.|..+.+...... .
T Consensus 127 v~iH~r~--a~~~~l~iL~~~----~~~~-~~~v~H~fsG~~~~a~~~~~~G~~is~~g~~t~----------------~ 183 (265)
T PRK10812 127 VIVHTRD--ARADTLAILREE----KVTD-CGGVLHCFTEDRETAGKLLDLGFYISFSGIVTF----------------R 183 (265)
T ss_pred eEEEeeC--chHHHHHHHHhh----cCCC-CCEEEEeecCCHHHHHHHHHCCCEEEECeeeec----------------C
Confidence 8899753 344656666543 1111 235689998888999999999988887754221 1
Q ss_pred hchHHHHHHHCC--CeeeecCCCCCCCCCh-------HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 430 ESYLFQSLLANN--ALLALGSDWPVADINP-------LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 430 ~~~~~~~l~~~G--v~~~~GTD~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
....++++.+.+ =++.+.||+|...+.+ ...+....... ..-.+++.+++.+..+.|+.+.++
T Consensus 184 ~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~i--------a~l~g~~~eei~~~~~~N~~~lf~ 255 (265)
T PRK10812 184 NAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYM--------AVLKGVSVEELAQVTTDNFARLFH 255 (265)
T ss_pred ccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHH--------HHHhCCCHHHHHHHHHHHHHHHHC
Confidence 112355666654 3789999998653211 11111111110 112468999999999999999999
Q ss_pred cCC
Q 008993 501 LEN 503 (547)
Q Consensus 501 l~~ 503 (547)
++.
T Consensus 256 ~~~ 258 (265)
T PRK10812 256 IDA 258 (265)
T ss_pred CCh
Confidence 853
No 125
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=97.70 E-value=0.0031 Score=60.49 Aligned_cols=94 Identities=16% Similarity=0.087 Sum_probs=60.1
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC--eeeecCCCCCCCCC-
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVADIN- 456 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv--~~~~GTD~~~~~~~- 456 (547)
...+.|+...+.+.++.+.+.|+.+.+.+....... ..++.+.+.+- ++.++||.|.....
T Consensus 146 ~~~i~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------------~~~~~~~~~~~~dril~~TD~p~~~~~~ 209 (251)
T cd01310 146 KRGVFHCFSGSAEEAKELLDLGFYISISGIVTFKNA----------------NELREVVKEIPLERLLLETDSPYLAPVP 209 (251)
T ss_pred CCEEEEccCCCHHHHHHHHHcCCEEEeeeeeccCCC----------------HHHHHHHHhCChHHEEEcccCCCCCCCC
Confidence 556778876666788888889998888876422111 11344444432 78999998764321
Q ss_pred ---------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 457 ---------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 457 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
....+...+. ...+++.+++.+..+.|+++.||
T Consensus 210 ~~~~~~~~~~~~~~~~~la-----------~~~gl~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 210 FRGKRNEPAYVKHVAEKIA-----------ELKGISVEEVAEVTTENAKRLFG 251 (251)
T ss_pred CCCCCCCChhHHHHHHHHH-----------HHHCcCHHHHHHHHHHHHHHHhC
Confidence 1111221111 23578999999999999999986
No 126
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=97.68 E-value=0.0018 Score=63.79 Aligned_cols=229 Identities=16% Similarity=0.075 Sum_probs=129.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEe----CccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccC-ccchhhHHH
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVD----FGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFP-LETWSSLAD 314 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 314 (547)
.+.++......+.++.+...|+...-- ......+.+.+.-.+...+..+.+...-++..++..... +-..++..+
T Consensus 78 ~~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~~~~~~gi~s~li~~~~r~~~~e~~~~ 157 (345)
T COG1816 78 RTEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRPAERDFGIHSKLIVCLLRHLGFESADE 157 (345)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHHHhhccCCccceEEEEEeecCHHHHHH
Confidence 356777888888889999888865442 222223334444444555666666665555555544332 223333333
Q ss_pred HHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc------------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCce
Q 008993 315 LINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFR 382 (547)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (547)
............+. ++ =.+|+........+. +.+|+......+.+.+++..+.. .+
T Consensus 158 ~~~~a~~~~~~~~~--~~--~l~~~e~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i~~al~~~~~--------~r 225 (345)
T COG1816 158 ELELALRYRDKLVT--GV--GLAGSESGYPPELFVSLFKLARDNGLKLTIHAGEAGGPESIRDALDLLGA--------ER 225 (345)
T ss_pred HHHHHhhcccccCc--cC--CCCcccccCCHHHHHHHHHHHHHcCceEEEeccccCCcHHHHHHHHHhch--------hh
Confidence 33222211100000 11 112222222221111 89998744444555555544322 26
Q ss_pred EeecCCC--ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC-ChHH
Q 008993 383 IEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI-NPLC 459 (547)
Q Consensus 383 i~H~~~~--~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~-~~~~ 459 (547)
|.|+..+ +++.+.++++.++.+.+||.++.... .-.. -...|+++|.++|+++++.||.|.... ..-.
T Consensus 226 I~HGi~~~~d~~L~~~l~~~qI~levCP~SNi~~~--------~v~~-~~~hPf~~~~d~Gv~VsLnTDdp~~f~~~l~~ 296 (345)
T COG1816 226 IGHGIRAIEDPELLYRLAERQIPLEVCPLSNIQLG--------VVPS-LAKHPFKKLFDAGVKVSLNTDDPLYFGTPLIE 296 (345)
T ss_pred hccccccccCHHHHHHHHHhCCeeEECCcchhhcc--------cccc-hhhCcHHHHHHcCCceEEcCCChhhcCCchHH
Confidence 8898844 45678899999999999999884111 1111 223579999999999999999987654 5556
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 460 AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
+...+... .+++.+| +.-.+.|+=+..+++
T Consensus 297 Ey~~aa~~------------~~l~~~d-l~~~arnav~~af~~ 326 (345)
T COG1816 297 EYLVAAQI------------YGLSRED-LCELARNAVEAAFIS 326 (345)
T ss_pred HHHHHHHH------------hCCCHHH-HHHHHHHHHHHccCC
Confidence 66555432 3477777 555666766665554
No 127
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=97.51 E-value=0.0014 Score=65.90 Aligned_cols=227 Identities=17% Similarity=0.103 Sum_probs=127.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCcc----CCCC--cccccchhHHHHHHHHHhhCCCCeeEEEEccCcc-c---hh
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGR----YYPG--ESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE-T---WS 310 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~ 310 (547)
+.+..+......++.+.+.|+..+.-.-. ...+ .+...-++...+.++++.++.++..++....... . ..
T Consensus 72 ~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R~~~~~~~~ 151 (331)
T PF00962_consen 72 TPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLRHFPDEWAE 151 (331)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTSTHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhccccccccccccccccccchHHHHH
Confidence 67888888888899999999987764321 1111 2333444455556666666656666666543222 2 22
Q ss_pred hHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh---hhhc-------eeEEecccHHHHHHHHHHHHHHHhcCCCCCC
Q 008993 311 SLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA---LFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQR 380 (547)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (547)
+..+........ ..-|+.+..+........ .+.. +.+|+..........+++..+ ..
T Consensus 152 ~~~~~~~~~~~~-----~vvG~dl~g~E~~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~~~~ai~~l--------~~ 218 (331)
T PF00962_consen 152 EIVELASKYPDK-----GVVGFDLAGDEDGGPPLKFAPAFRKAREAGLKLTVHAGETGGPEHIRDAILLL--------GA 218 (331)
T ss_dssp HHHHHHHHTTTT-----TEEEEEEESSTTSTTGGGHHHHHHHHHHTT-EEEEEESSSSTHHHHHHHHHTS--------T-
T ss_pred HHHHHHhhcccc-----eEEEEEecCCcccCchHHHHHHHhhhcccceeecceecccCCcccccchhhhc--------cc
Confidence 333333333321 233444444332222111 1111 999986554555555555331 14
Q ss_pred ceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCCh
Q 008993 381 FRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINP 457 (547)
Q Consensus 381 ~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~ 457 (547)
.+|.|+..+. ++.++.+++.++.+.+||.++.. ++.... -...|++.|+++|++++++||.|. .+.+.
T Consensus 219 ~RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~--------~~~~~~-~~~hP~~~~~~~gv~v~i~TDd~~~~~~~l 289 (331)
T PF00962_consen 219 DRIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQ--------LGAVPS-YEEHPLRKLLDAGVPVSINTDDPGVFGTTL 289 (331)
T ss_dssp SEEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHH--------TTSSST-GGG-CHHHHHHTT-EEEE--BSHHHHT-SH
T ss_pred eeecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcc--------cceeee-cchhHHHHHHHcCCceeccCCCccccCCCc
Confidence 5999999664 56688999999999999997652 111111 234589999999999999999874 34566
Q ss_pred HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 458 LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
..++..+... .+++.++ +.....|+.+...++
T Consensus 290 ~~ey~~~~~~------------~~l~~~~-l~~l~~nsi~~sf~~ 321 (331)
T PF00962_consen 290 SDEYYLAAEA------------FGLSLAD-LKQLARNSIEASFLS 321 (331)
T ss_dssp HHHHHHHHHH------------HT--HHH-HHHHHHHHHHCSSS-
T ss_pred HHHHHHHHHH------------cCCCHHH-HHHHHHHHHHHHcCC
Confidence 6666665532 3688887 555556877766654
No 128
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=97.25 E-value=0.026 Score=54.19 Aligned_cols=117 Identities=15% Similarity=0.051 Sum_probs=72.4
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +.+.+++.+.+. +. ....+-|+.--+.++++++.+.|..+...+.......
T Consensus 130 v~iH~r~--a~~~~~~il~~~----~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS~~g~it~~~~-------------- 187 (258)
T PRK11449 130 VILHSRR--THDKLAMHLKRH----DL--PRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRA-------------- 187 (258)
T ss_pred EEEEecC--ccHHHHHHHHhc----CC--CCCeEEEcCCCCHHHHHHHHHCCCEEEeCccccccCc--------------
Confidence 8899853 455666655432 21 1246899999899999999999998887765432111
Q ss_pred hchHHHHHHHC-CC-eeeecCCCCCCCCC----------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 430 ESYLFQSLLAN-NA-LLALGSDWPVADIN----------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 430 ~~~~~~~l~~~-Gv-~~~~GTD~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
..++++.+. .. .+.+.||+|...+. ........+. .-.+++++++.+..+.|..+
T Consensus 188 --~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia-----------~l~~~~~~el~~~~~~N~~~ 254 (258)
T PRK11449 188 --SKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLC-----------ELRPEPADEIAEVLLNNTYT 254 (258)
T ss_pred --HHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHH-----------HHHCcCHHHHHHHHHHHHHH
Confidence 122333331 22 57899999874322 1112221111 22367889999989999888
Q ss_pred Hccc
Q 008993 498 ACFL 501 (547)
Q Consensus 498 ~lgl 501 (547)
.+|+
T Consensus 255 lf~~ 258 (258)
T PRK11449 255 LFNV 258 (258)
T ss_pred HhCc
Confidence 8874
No 129
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=97.15 E-value=0.074 Score=52.28 Aligned_cols=130 Identities=9% Similarity=-0.021 Sum_probs=78.3
Q ss_pred eeEEeccc-HHHHHHHHHHHHHHHhcCCCCCCceEeecC-CCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+.+|+... .+....++.+++ .+....+..+.|+. ..+.+.++.+.+.|+.+..+........ ...+. .
T Consensus 152 v~iH~~~~~~~~~~~l~~l~~----~g~~~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~----~~~~~--~ 221 (293)
T cd00530 152 ISTHTQAGLTMGLEQLRILEE----EGVDPSKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIF----GYPSD--E 221 (293)
T ss_pred EEEcCCCCccccHHHHHHHHH----cCCChhheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCccccc----CCCCH--H
Confidence 78887532 344554544433 24444456889998 4567889999999988877743211000 00000 0
Q ss_pred hhhchHHHHHHHCCC--eeeecCCCCCCCCC--------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 428 ERESYLFQSLLANNA--LLALGSDWPVADIN--------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv--~~~~GTD~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
.....++++.+.|. .+.++||+|..... +..-+..... .....+++.+++.++.+.||++
T Consensus 222 -~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~e~i~~~~~~N~~~ 291 (293)
T cd00530 222 -TRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYGGHGYDYILTRFIP---------RLRERGVTEEQLDTILVENPAR 291 (293)
T ss_pred -HHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccCCCChHHHHHHHHH---------HHHHcCCCHHHHHHHHHHCHHH
Confidence 12235788888987 78999998764321 1111111111 1135578999999999999998
Q ss_pred Hc
Q 008993 498 AC 499 (547)
Q Consensus 498 ~l 499 (547)
.|
T Consensus 292 lf 293 (293)
T cd00530 292 FL 293 (293)
T ss_pred hC
Confidence 75
No 130
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=97.14 E-value=0.04 Score=57.56 Aligned_cols=233 Identities=15% Similarity=0.080 Sum_probs=127.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCccC-----CCCc--ccccchhHHHHHHHHHhhCC--CCeeEEEEccC-ccchh
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGRY-----YPGE--SVQLSWEDFADVYQWASYSE--KMKIRVCLFFP-LETWS 310 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~ 310 (547)
.....+.-+.+.++.+.+-||..+.-.... ..+. +.++.++...+.++.+.+.+ .+.+++..... ....+
T Consensus 191 y~p~~~~~~~~~l~d~~~DgV~Y~ElR~~p~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~fi~~rlI~~~~R~~~~~ 270 (479)
T TIGR01431 191 YAPSWRDYYYRALEEFYADNVQYLELRSTLFILYELEGTSHDEEDSVRIYKEVTEKFMAEHPDFIGSKLIYSPLRNKDKE 270 (479)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEecCchHhhcCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEEEccCCCCHH
Confidence 456777888888999999999877654321 1111 22223444455555555544 34555544332 22223
Q ss_pred hHHHHHHhc---CCCCCCcEEEceEEEEEcCC----cCcchhhhh-----c---eeEEecccH-----HHHHHHHHHHHH
Q 008993 311 SLADLINKT---GHVLSDWVYLGGVKAFADGS----LGSNSALFH-----E---VAIHAIGDR-----ANDLVLDMYKSV 370 (547)
Q Consensus 311 ~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~-----~---v~~H~~~~~-----~~~~~~~~~~~~ 370 (547)
...+.+... .....+ .+-|+.+-.+.. +..+...+. . +.+|+.... .-..+.+++ .+
T Consensus 271 ~~~~~~~~a~~~k~~~p~--~vvGfDL~G~E~~g~pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~~~d~nl~dAI-lL 347 (479)
T TIGR01431 271 ELDNYIKVAMELKEKYPD--FVAGFDLVGQEDKGRSLLDFIDALLGPSDKEKLPYFFHAGETNWQGTTVDENLIDAL-LL 347 (479)
T ss_pred HHHHHHHHHHHHHhhCCC--eEEEEeccCCCCCCCCHHHHHHHHHHHHHhCCCCEEEecCCcCCCCCCchhHHHHHH-Hc
Confidence 333332222 111111 144554443332 111111221 1 778874211 123344444 22
Q ss_pred HHhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 371 VVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 371 ~~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
...+|.|+..+. ++.++.+++.++.+.+||.++... +.+.. -..-|++.|+++|++++++|
T Consensus 348 --------g~~RIGHG~~l~~~P~l~~~vke~~I~lEvCP~SN~~l-----~~v~~----~~~HPl~~lla~Gvpv~InS 410 (479)
T TIGR01431 348 --------NTTRIGHGFALVKHPLVLQMLKERNIAVEVNPISNQVL-----QLVAD----LRNHPCAYLFADNYPMVISS 410 (479)
T ss_pred --------CCccccCcccccCCHHHHHHHHHhCCeEEECccchhhh-----cccCC----cccChHHHHHHCCCcEEEeC
Confidence 144899999765 778999999999999999987522 12221 22358999999999999999
Q ss_pred CCCCCC-C-ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 449 DWPVAD-I-NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 449 D~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
|.|... . ..-.+.+.+..... ...+++. -|+....|+.+.--+++
T Consensus 411 DDP~~~~~t~Ls~ef~~a~~~~~---------~~~~~l~-~L~~la~NSi~~Sfl~~ 457 (479)
T TIGR01431 411 DDPAFWGATPLSHDFYIAFMGLA---------SAKADLR-TLKQLALNSIKYSALSE 457 (479)
T ss_pred CCccccCCCCchHHHHHHHHHhc---------ccCCCHH-HHHHHHHHHHHHHCCCH
Confidence 988642 2 35555555443211 1113554 46666667777665543
No 131
>PRK09875 putative hydrolase; Provisional
Probab=97.09 E-value=0.1 Score=50.84 Aligned_cols=220 Identities=12% Similarity=0.113 Sum_probs=122.1
Q ss_pred HHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCcc----------chhhHHHHHHh
Q 008993 249 LLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE----------TWSSLADLINK 318 (547)
Q Consensus 249 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 318 (547)
...-++.+.+.|..++.|+....-+ +..+.+++++++.++.+.....+-.+ ..+++.+.+..
T Consensus 36 ~~~el~~~~~~Gg~tiVd~T~~g~G--------Rd~~~l~~is~~tgv~Iv~~TG~y~~~~~p~~~~~~~~e~la~~~i~ 107 (292)
T PRK09875 36 ICQEMNDLMTRGVRNVIEMTNRYMG--------RNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVD 107 (292)
T ss_pred HHHHHHHHHHhCCCeEEecCCCccC--------cCHHHHHHHHHHhCCcEEEcCcCCCCccCCHHHhcCCHHHHHHHHHH
Confidence 3344556678899999998755433 44577888888888777766543222 12333333322
Q ss_pred -cCCCC-CCcEEEceEEEEE--cCCcCcchhhhhc------------eeEEeccc-HHHHHHHHHHHHHHHhcCCCCCCc
Q 008993 319 -TGHVL-SDWVYLGGVKAFA--DGSLGSNSALFHE------------VAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRF 381 (547)
Q Consensus 319 -~~~~~-~~~~~~~~~~~~~--d~~~~~~~~~~~~------------v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 381 (547)
..... .+-++.+-+.-+. .+.+...-....+ +.+|.... ...++ ++. +.+.|....+.
T Consensus 108 ei~~Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~e~-l~i----l~e~Gvd~~rv 182 (292)
T PRK09875 108 EIEQGIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQ-LAL----LQAHGVDLSRV 182 (292)
T ss_pred HHHHhhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchHHH-HHH----HHHcCcCcceE
Confidence 11110 1111222231221 2223322221111 78886432 22332 333 34447777789
Q ss_pred eEeecC-CCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCC-C-eeeecCCCCCCC----
Q 008993 382 RIEHAQ-HLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-A-LLALGSDWPVAD---- 454 (547)
Q Consensus 382 ~i~H~~-~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~G-v-~~~~GTD~~~~~---- 454 (547)
.+.|.. ..+.+.+..+++.|+.+..+-- .... +.+.+ .....++.+.+.| . ++.+++|....+
T Consensus 183 vi~H~d~~~d~~~~~~l~~~G~~l~fD~~-g~~~------~~pd~---~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~ 252 (292)
T PRK09875 183 TVGHCDLKDNLDNILKMIDLGAYVQFDTI-GKNS------YYPDE---KRIAMLHALRDRGLLNRVMLSMDITRRSHLKA 252 (292)
T ss_pred EEeCCCCCCCHHHHHHHHHcCCEEEeccC-CCcc------cCCHH---HHHHHHHHHHhcCCCCeEEEeCCCCCcccccc
Confidence 999997 4456778899999999887521 1000 00100 2234678899998 3 788999964321
Q ss_pred ---CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 455 ---INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 455 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
...-..+...+.++ .+.|++.+++=++...||++.|+
T Consensus 253 ~gg~G~~~i~~~~ip~L---------~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 253 NGGYGYDYLLTTFIPQL---------RQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred cCCCChhHHHHHHHHHH---------HHcCCCHHHHHHHHHHCHHHHhC
Confidence 11123333333332 45589999999999999999874
No 132
>PRK10425 DNase TatD; Provisional
Probab=97.03 E-value=0.074 Score=51.04 Aligned_cols=122 Identities=13% Similarity=0.017 Sum_probs=72.1
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+. .+.+.+++.++.... ...-.+.|+..-+.+.++++.+.|..+...+.......
T Consensus 124 v~iH~r--~a~~~~l~iL~~~~~-----~~~~~i~H~fsG~~~~~~~~l~~G~~~si~g~i~~~~~-------------- 182 (258)
T PRK10425 124 VFMHCR--DAHERFMALLEPWLD-----KLPGAVLHCFTGTREEMQACLARGLYIGITGWVCDERR-------------- 182 (258)
T ss_pred eEEEEe--CchHHHHHHHHHhcc-----CCCCeEEEecCCCHHHHHHHHHCCCEEEECceeecccc--------------
Confidence 889985 444666766654211 11236789999999999999999998888775332110
Q ss_pred hchHHHHHHH-CCC-eeeecCCCCCCCCChH-----------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 008993 430 ESYLFQSLLA-NNA-LLALGSDWPVADINPL-----------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAA 496 (547)
Q Consensus 430 ~~~~~~~l~~-~Gv-~~~~GTD~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A 496 (547)
...++++.+ -.. .+.+-||+|...+.++ ..+...+.. +..-.+++.+++.+..+.|.-
T Consensus 183 -~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~--------iA~l~~~~~~~v~~~~~~N~~ 253 (258)
T PRK10425 183 -GLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQR--------IAHWRGEDAAWLAATTDANAR 253 (258)
T ss_pred -cHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHH--------HHHHHCcCHHHHHHHHHHHHH
Confidence 001223332 111 4788999986432111 111111111 112346899999998888888
Q ss_pred HHccc
Q 008993 497 RACFL 501 (547)
Q Consensus 497 ~~lgl 501 (547)
+.+|+
T Consensus 254 ~lf~~ 258 (258)
T PRK10425 254 TLFGL 258 (258)
T ss_pred HHhCc
Confidence 87764
No 133
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=96.83 E-value=0.051 Score=51.71 Aligned_cols=120 Identities=20% Similarity=0.169 Sum_probs=75.5
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+ ..+.+.+++.+++... ....+-||.--+.++++++.+.|..+...+.....+..
T Consensus 128 viIH~--R~A~~d~~~iL~~~~~------~~~gi~HcFsGs~e~a~~~~d~G~yisisG~itfk~a~------------- 186 (256)
T COG0084 128 VIIHT--RDAHEDTLEILKEEGA------PVGGVLHCFSGSAEEARKLLDLGFYISISGIVTFKNAE------------- 186 (256)
T ss_pred EEEEc--cccHHHHHHHHHhcCC------CCCEEEEccCCCHHHHHHHHHcCeEEEECceeecCCcH-------------
Confidence 88998 4456666666655422 35688999999999999999999888877765442211
Q ss_pred hchHHHHHHHC-CC-eeeecCCCCCCCCChHHH-------HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 430 ESYLFQSLLAN-NA-LLALGSDWPVADINPLCA-------IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 430 ~~~~~~~l~~~-Gv-~~~~GTD~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
.++++.+. -. ++.+=||+|...+.|+.+ +...+.. ...--+++++++.+..|.|.-+.+|
T Consensus 187 ---~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~--------iAelk~~~~eeva~~t~~N~~~lf~ 255 (256)
T COG0084 187 ---KLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEK--------LAELKGISAEEVAEITTENAKRLFG 255 (256)
T ss_pred ---HHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHH--------HHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 11222211 11 367889999765432222 1111100 1122378999999999999888876
Q ss_pred c
Q 008993 501 L 501 (547)
Q Consensus 501 l 501 (547)
+
T Consensus 256 ~ 256 (256)
T COG0084 256 L 256 (256)
T ss_pred C
Confidence 4
No 134
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=96.77 E-value=0.1 Score=52.00 Aligned_cols=229 Identities=15% Similarity=0.088 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHHhCCccEEEeCccCC-----CC-cccccchhHHHHHHHHHhhCCCCeeEEEEccC-ccchhhHHH
Q 008993 242 VDERREALLRASNLALSRGVTTVVDFGRYY-----PG-ESVQLSWEDFADVYQWASYSEKMKIRVCLFFP-LETWSSLAD 314 (547)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 314 (547)
....+.-..+++++....|+..+.-..... .| .+.+.......+..++..+...+..++.+.+- ..+.+...+
T Consensus 116 ~~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~~~~~fpI~sklI~~~~R~~~~e~~~e 195 (399)
T KOG1097|consen 116 APAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEKAKRDFPIKSKLIMCCIRHMPPEVAEE 195 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCCCcceEEEeeccCCChHHHHH
Confidence 455666777888999999998776542110 11 33344455556666666766667777665442 222222223
Q ss_pred HHHhcCC---CCCCcEEEceEEEEEcCCc--Ccchhhhhc-----------eeEEeccc-HHHHHHHHHHHHHHHhcCCC
Q 008993 315 LINKTGH---VLSDWVYLGGVKAFADGSL--GSNSALFHE-----------VAIHAIGD-RANDLVLDMYKSVVVTTGKR 377 (547)
Q Consensus 315 ~~~~~~~---~~~~~~~~~~~~~~~d~~~--~~~~~~~~~-----------v~~H~~~~-~~~~~~~~~~~~~~~~~~~~ 377 (547)
.+..... .... -.-|+.+ +|.. ......+.. +.+|+... .......+++. ++
T Consensus 196 ~v~~~~~~~~~~~~--~VvGidL--~G~e~~~~p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~v~~~LD-~l------ 264 (399)
T KOG1097|consen 196 TVSEAKELNKLFPN--FVVGIDL--VGQEDLGGPLSLFLEVLAKAPAKGIHLTFHAGETNGGASVVKNALD-LL------ 264 (399)
T ss_pred HHHHHHHHHHhCCC--eEEEEec--CCCCCCCCChhhhHHHHHhhhhcCCcEEEEccccCCChHHHHHHHH-hh------
Confidence 3322211 1011 1112222 3332 111111111 78887422 12222222222 11
Q ss_pred CCCceEeecCCCChhH--HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC
Q 008993 378 DQRFRIEHAQHLASGT--AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI 455 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~--l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~ 455 (547)
...+|.|+..+.++. +.++++.++.+.+||.++....- +.. ....|++.+.++|+++.+.||.|..-.
T Consensus 265 -~~~RIGHG~~l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~-----v~d----~rnhp~~~~~~~~vP~vI~sDDP~~f~ 334 (399)
T KOG1097|consen 265 -GTERIGHGYFLTKDPELINLLKSRNIALEICPISNQVLGL-----VSD----LRNHPVARLLAAGVPVVINSDDPGFFG 334 (399)
T ss_pred -CCccccCceeccCCHHHHHHHHhcCceEEEccchhhheec-----ccc----ccccHHHHHHhCCCCEEEeCCCccccc
Confidence 144899999887766 88999999999999998752221 111 334689999999999999999875422
Q ss_pred C--hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 456 N--PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 456 ~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
. .-...+.++.... . +++..+.. .+..|..+..-++
T Consensus 335 ~~~Lt~dfy~A~~~~~---------~-~~~~~~l~-~la~nai~~S~l~ 372 (399)
T KOG1097|consen 335 AAPLTLDFYLAFLGIA---------P-NLDLRELK-RLALNAIKYSFLS 372 (399)
T ss_pred CccccHHHHHHHHhcc---------c-cCCHHHHH-HHHHHHhhhccCC
Confidence 1 1223333332221 1 56777744 4455777766553
No 135
>PLN03055 AMP deaminase; Provisional
Probab=95.52 E-value=0.073 Score=56.30 Aligned_cols=120 Identities=15% Similarity=0.059 Sum_probs=81.6
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~--~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+..|+......+.+..++ + ...+|.|+..+ ++.....+...++.+.+||.++..... .
T Consensus 419 ~rpHAGEag~~~~v~~al--L--------~a~RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~-------~--- 478 (602)
T PLN03055 419 FRPHAGEAGDIDHLAAAF--L--------LAHNIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFL-------D--- 478 (602)
T ss_pred ccccCCCCCCHHHHHHHh--h--------CCceecCccccCCCHHHHHHHHHcCCeEEEccCcchhhcc-------c---
Confidence 788876333344444443 1 14588999966 356677888999999999998852111 1
Q ss_pred hhhchHHHHHHHCCCeeeecCCCCCCC-C---ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 428 ERESYLFQSLLANNALLALGSDWPVAD-I---NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
...-|++.|.++|++++++||.|... . ...++...+. +..+++..+. ...+.|+.++.++++
T Consensus 479 -y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa------------~~~~LS~~DL-~eLarNSV~~Sf~~~ 544 (602)
T PLN03055 479 -YHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAA------------QVWKLSSCDL-CEIARNSVLQSGFPH 544 (602)
T ss_pred -hhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHH------------HHhCCCHHHH-HHHHHHHHHHhcCCH
Confidence 22347999999999999999998653 2 2555555544 2346888885 556789999888854
No 136
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=95.47 E-value=0.073 Score=55.41 Aligned_cols=120 Identities=14% Similarity=0.056 Sum_probs=80.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChh--HHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASG--TAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~--~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+..|+......+.+.+++ + . ..+|.|+..+.++ ....+...++.+.+||.++..- ...
T Consensus 329 ~r~HaGE~g~~~~l~~al--L-------~-adRIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~l-------~~~--- 388 (496)
T cd01319 329 LRPHCGEAGDIDHLASAF--L-------L-AHGISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNSL-------FLS--- 388 (496)
T ss_pred eeeecCCCCChHHHHHHh--h-------c-CcccccccccCCCHHHHHHHHHcCCeEEEecCccHhh-------hcC---
Confidence 888987555555555555 1 1 4589999977543 3344567899999999987521 011
Q ss_pred hhhchHHHHHHHCCCeeeecCCCCCCC-C---ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 428 ERESYLFQSLLANNALLALGSDWPVAD-I---NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
...-|+..+.+.|+++++.||.|... . ...++...+. +..+++..+ +.....|+.+..++++
T Consensus 389 -~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~------------~~~~Ls~~D-l~eLarNSV~~Sf~~~ 454 (496)
T cd01319 389 -YEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAA------------QVWKLSTCD-MCELARNSVLQSGFEH 454 (496)
T ss_pred -cccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHH------------HHcCCCHHH-HHHHHHHHHHHhCCCH
Confidence 22357999999999999999998643 2 2555555443 234688877 4566779988888864
No 137
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=95.31 E-value=0.1 Score=55.32 Aligned_cols=120 Identities=14% Similarity=0.056 Sum_probs=79.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+..|+......+.+.+++ + ...+|.|+..+. +.....+...++.+.+||.++..-. .+
T Consensus 441 LrpHaGEag~~e~l~~A~--L--------~adRIgHGi~l~~dp~L~yl~~~~qI~LevCPtSN~~l~------~~---- 500 (611)
T TIGR01429 441 LRPHCGEAGSVDHLVSAF--L--------TSHGINHGILLRKVPVLQYLYYLTQIPIAMSPLSNNSLF------LE---- 500 (611)
T ss_pred eeecCCCCCCHHHHHHHh--h--------cCcccccceecCCCHHHHHHHHHcCCeEEEcCCcchhhc------cC----
Confidence 568886444455555544 1 145789999764 3334456789999999999885211 11
Q ss_pred hhhchHHHHHHHCCCeeeecCCCCCCC-C---ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 428 ERESYLFQSLLANNALLALGSDWPVAD-I---NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
...-|++.|.++|+++++.||.|... . ...++...+. +..+++..+. .....|+....++++
T Consensus 501 -y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa------------~~~~Ls~~Dl-~eLarNSV~~S~~~~ 566 (611)
T TIGR01429 501 -YSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAA------------QVWKLSTCDM-CELARNSVLQSGFEH 566 (611)
T ss_pred -hhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHH------------HHhCCCHHHH-HHHHHHHHHHhCCCH
Confidence 22347999999999999999998643 2 2555554443 2346888874 445678898888864
No 138
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=95.20 E-value=0.033 Score=44.62 Aligned_cols=37 Identities=35% Similarity=0.598 Sum_probs=30.3
Q ss_pred cccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhH
Q 008993 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSA 82 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~ 82 (547)
..|++|+|+.|+|..+ +.+.+|.|+||||+.||....
T Consensus 65 ~lD~VItNa~IiD~~G--I~KADIGIkdG~I~gIGkAGN 101 (121)
T PF00449_consen 65 ALDLVITNALIIDYTG--IVKADIGIKDGRIVGIGKAGN 101 (121)
T ss_dssp C-SEEEEEEEEEETTE--EEEEEEEEETTEEEEEE-EB-
T ss_pred cccEEEeCcEEEecCC--cEEeeEEeeCCEEEEEeccCC
Confidence 5699999999999955 477899999999999997654
No 139
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=95.18 E-value=2.5 Score=38.69 Aligned_cols=97 Identities=21% Similarity=0.196 Sum_probs=60.3
Q ss_pred CCCCCCceEeecCCCChhHHHHHHhCC--cEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCC-CeeeecCCCC
Q 008993 375 GKRDQRFRIEHAQHLASGTAARFGDQG--IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWP 451 (547)
Q Consensus 375 ~~~~~~~~i~H~~~~~~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~G-v~~~~GTD~~ 451 (547)
+.......|.|++ .+.++.+-..+ +.+.++|.-. ++.. .++...+.| -++.+.||..
T Consensus 154 ~l~~~lvvIDH~N---~etv~~vld~e~~vGlTvqPgKl-----------t~~e------AveIV~ey~~~r~ilnSD~~ 213 (254)
T COG1099 154 GLKPSLVVIDHVN---EETVDEVLDEEFYVGLTVQPGKL-----------TVEE------AVEIVREYGAERIILNSDAG 213 (254)
T ss_pred CCChhheehhccc---HHHHHHHHhccceEEEEecCCcC-----------CHHH------HHHHHHHhCcceEEEecccc
Confidence 5555566666765 46666555555 4566777522 2222 356666777 5899999987
Q ss_pred CCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 452 VADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
....|++.--+.++.. ...|+.-++.-+.+-.|+-+.+|+
T Consensus 214 s~~sd~lavprtal~m----------~~~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 214 SAASDPLAVPRTALEM----------EERGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred cccccchhhhHHHHHH----------HHhcCCHHHHHHHHHHHHHHHhCc
Confidence 6666766655555443 345678777666666666666665
No 140
>PLN02768 AMP deaminase
Probab=94.64 E-value=0.2 Score=54.37 Aligned_cols=120 Identities=13% Similarity=0.003 Sum_probs=80.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+..|+......+.+..++ + ...+|.|+..+. +.....+...++.+.+||.++..-.. .
T Consensus 652 fRPHAGEag~~e~I~~Al--L--------~AdRIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~-------~--- 711 (835)
T PLN02768 652 FRPHSGEAGDIDHLAATF--L--------TCHNIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFL-------D--- 711 (835)
T ss_pred cccccCCCCCHHHHHHHH--h--------cCCccCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhc-------c---
Confidence 778876444445555555 1 144778998663 34445677789999999998862111 1
Q ss_pred hhhchHHHHHHHCCCeeeecCCCCCCC-C---ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 428 ERESYLFQSLLANNALLALGSDWPVAD-I---NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
...-|++.|.++|+++++.||.|... . ...++...+. +..+++..+..+ .+.|+....+++.
T Consensus 712 -y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAa------------k~~~LS~~DL~E-LarNSV~aSff~~ 777 (835)
T PLN02768 712 -YHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAA------------SVWKLSSCDLCE-IARNSVYQSGFSH 777 (835)
T ss_pred -hhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHH------------HHhCcCHHHHHH-HHHHHHHHhcCCH
Confidence 22358999999999999999998653 2 2555555443 334688887554 4678888888854
No 141
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=94.57 E-value=2.6 Score=41.49 Aligned_cols=231 Identities=16% Similarity=0.102 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCccc----------hhhHHHH
Q 008993 246 REALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET----------WSSLADL 315 (547)
Q Consensus 246 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 315 (547)
.+....-++.+.+.|..++.|+.....+ +....+++++++.++.+-....+..+. .+++.+.
T Consensus 37 ~~~~~~El~~~k~~Gg~tiVd~T~~g~G--------Rd~~~l~~is~~tGv~II~~TG~y~~~~~p~~~~~~s~e~la~~ 108 (308)
T PF02126_consen 37 VEAAVAELKEFKAAGGRTIVDATPIGLG--------RDVEALREISRRTGVNIIASTGFYKEPFYPEWVREASVEELADL 108 (308)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--SGGGT--------B-HHHHHHHHHHHT-EEEEEEEE-SGGCSCHHHHTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccC--------cCHHHHHHHHHHhCCeEEEeCCCCccccCChhhhcCCHHHHHHH
Confidence 3445555677788999999998754322 445888888888888877766443211 2333333
Q ss_pred HHh-cCCC-CCCcEEEceEEEEEcC-CcCcchhhhhc------------eeEEecccH-HHHHHHHHHHHHHHhcCCCCC
Q 008993 316 INK-TGHV-LSDWVYLGGVKAFADG-SLGSNSALFHE------------VAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQ 379 (547)
Q Consensus 316 ~~~-~~~~-~~~~~~~~~~~~~~d~-~~~~~~~~~~~------------v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~ 379 (547)
+.. .... -.+-++.+=+|...+. .+......... +.+|..... ...+.++.++ +.|....
T Consensus 109 ~i~Ei~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~e~~~il~----e~Gv~~~ 184 (308)
T PF02126_consen 109 FIREIEEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGLEQLDILE----EEGVDPS 184 (308)
T ss_dssp HHHHHHT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHHHHHHHHH----HTT--GG
T ss_pred HHHHHHhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHHHHHHHHH----HcCCChh
Confidence 322 1111 1233555666665544 23322222111 888886443 3344444443 3466677
Q ss_pred CceEeecCCC-ChhHHHHHHhCCcEEEecCc-cccCChhHHHHhhC-hhhhhhhchHHHHHHHCCC--eeeecCCCCC--
Q 008993 380 RFRIEHAQHL-ASGTAARFGDQGIVASMQPQ-HLLDDADSARKKLG-VDRAERESYLFQSLLANNA--LLALGSDWPV-- 452 (547)
Q Consensus 380 ~~~i~H~~~~-~~~~l~~~~~~g~~~~~~p~-~~~~~~~~~~~~~g-~~~~~~~~~~~~~l~~~Gv--~~~~GTD~~~-- 452 (547)
+..+.|.... +.+.+..+++.|+.+..--. ...+.... ...++ +... .....+..|.++|- .+.+|.|...
T Consensus 185 rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~-~~~~~~~~d~-~ri~~l~~L~~~Gy~~qIlLS~D~~~k~ 262 (308)
T PF02126_consen 185 RVVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDK-NPRVGYPPDE-ERIELLKELIEEGYADQILLSHDIGRKS 262 (308)
T ss_dssp GEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTT-CHSCTTS-HH-HHHHHHHHHHHTTTGGGEEE-HHHESEE
T ss_pred HeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCccc-CccCCCCCHH-HHHHHHHHHHHcCCcCcEEEeccccccc
Confidence 8999999833 34556788899998876322 00000000 00000 0011 33346889999988 6999999432
Q ss_pred -CCCC--hHHH----HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 008993 453 -ADIN--PLCA----IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARAC 499 (547)
Q Consensus 453 -~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~l 499 (547)
+... .... +...+.+ .++.|++.+++=++...||+++|
T Consensus 263 ~~~~~gg~g~~~~~i~~~fiP~---------L~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 263 RLYRYGGGGYGYIYILTRFIPR---------LKERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp GSSSCCHHHHTTTHHHHTHHHH---------HHHTTS-HHHHHHHHTHHHHHHH
T ss_pred cccccCCCCccHHHHHHHHHHH---------HHHcCCCHHHHHHHHHHCHHHHc
Confidence 1000 0010 0111111 13458999999999999999986
No 142
>PRK06361 hypothetical protein; Provisional
Probab=93.82 E-value=0.32 Score=45.19 Aligned_cols=96 Identities=9% Similarity=-0.010 Sum_probs=67.3
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC-CChH
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD-INPL 458 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~~~~ 458 (547)
-..+.|......+.++.+++.++.+.++...... . ....-++...+.|+++++|||+-... ...+
T Consensus 114 ~dvlaHpd~~~~~~~~~~~~~~~~lEin~~~~~~--------~------~~~~~l~~a~~~gi~vv~~SDaH~~~d~~~~ 179 (212)
T PRK06361 114 VDILAHPGLITEEEAELAAENGVFLEITARKGHS--------L------TNGHVARIAREAGAPLVINTDTHAPSDLITY 179 (212)
T ss_pred CcEecCcchhhHHHHHHHHHcCeEEEEECCCCcc--------c------chHHHHHHHHHhCCcEEEECCCCCHHHHHHH
Confidence 4688888888888899999999999987531110 0 11123566778899999999976221 1222
Q ss_pred HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 459 CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
..+.. +..+.|++.++++.+.+.||+..++.
T Consensus 180 ~~~~~------------i~~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 180 EFARK------------VALGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred HHHHH------------HHcCCCCCHHHHHHHHHHhHHHHHHh
Confidence 22222 22677899999999999999999874
No 143
>PTZ00310 AMP deaminase; Provisional
Probab=93.70 E-value=0.34 Score=56.00 Aligned_cols=120 Identities=13% Similarity=0.019 Sum_probs=80.9
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCh-hHHHHH-HhCCcEEEecCccccCCh-hHHHHhhChhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-GTAARF-GDQGIVASMQPQHLLDDA-DSARKKLGVDR 426 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-~~l~~~-~~~g~~~~~~p~~~~~~~-~~~~~~~g~~~ 426 (547)
+..|+.....++..+.++-. ..+|.|+..+.+ ..+..+ ...++.+.+||.++.... ..
T Consensus 482 LRPhcgeag~~dhLv~~fLl----------adRI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~s--------- 542 (1453)
T PTZ00310 482 LRPSGEKAPAYDQLISSYLL----------GDVITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITA--------- 542 (1453)
T ss_pred ecCCCCCCCCHHHHHHHHHh----------hccccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCc---------
Confidence 66666555556665554422 458889985543 344444 489999999999886332 11
Q ss_pred hhhhchHHHHHHHCCCeeeecCCCCCCC-CC---hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 427 AERESYLFQSLLANNALLALGSDWPVAD-IN---PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 427 ~~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
....|++.|.++|+++++.||.|... .. ..++...+. +..+++..+.. .++.|+....+++
T Consensus 543 --y~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa------------q~~gLS~~DL~-eLarNSV~aSf~~ 607 (1453)
T PTZ00310 543 --YFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM------------KLFSLSPLDTT-ELARNSVLNSSFP 607 (1453)
T ss_pred --hhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH------------HHhCcCHHHHH-HHHHHHHHHhCCC
Confidence 22358999999999999999998763 32 555555544 34478988744 4567888888885
Q ss_pred C
Q 008993 503 N 503 (547)
Q Consensus 503 ~ 503 (547)
+
T Consensus 608 ~ 608 (1453)
T PTZ00310 608 P 608 (1453)
T ss_pred H
Confidence 4
No 144
>PTZ00310 AMP deaminase; Provisional
Probab=93.51 E-value=0.41 Score=55.32 Aligned_cols=120 Identities=13% Similarity=-0.002 Sum_probs=82.3
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+..||......+.+..++ + ...+|.|+..+. +..+..+...++.+.+||.++......
T Consensus 1112 ~rpHAGEag~~~hI~~Al--L--------~a~RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~s---------- 1171 (1453)
T PTZ00310 1112 LRPHCGESGSMDHLYGAF--L--------CANSICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLA---------- 1171 (1453)
T ss_pred ccccCCCCCCHHHHHHHH--h--------CCccccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhc----------
Confidence 788886444555555555 1 145899999774 444567778999999999988521111
Q ss_pred hhhchHHHHHHHCCCeeeecCCCCCCC-CC---hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 428 ERESYLFQSLLANNALLALGSDWPVAD-IN---PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 428 ~~~~~~~~~l~~~Gv~~~~GTD~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
...-|++.|.+.|++++++||.|... .. ..++...+. +..+++..+.. -...|+...-|++.
T Consensus 1172 -y~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa------------~~~~LS~~Dl~-elarNSV~~SGf~~ 1237 (1453)
T PTZ00310 1172 -FLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAA------------RVWGLSLNDLC-EIARNSVLQSGFDA 1237 (1453)
T ss_pred -hhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHH------------HHhCCCHHHHH-HHHHHHHHHcCCCH
Confidence 22348999999999999999998653 33 445544433 33468988844 45679999999854
No 145
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=92.75 E-value=0.037 Score=45.80 Aligned_cols=20 Identities=45% Similarity=1.016 Sum_probs=18.2
Q ss_pred CCeeeccccccccccccccc
Q 008993 98 GKVVVPGFIDSHVHFIPGGL 117 (547)
Q Consensus 98 g~~v~PGlID~H~H~~~~~~ 117 (547)
|++++|||||+|+|+..+++
T Consensus 1 ~kli~~g~vd~hVhlrepg~ 20 (142)
T PF12890_consen 1 GKLILPGLVDVHVHLREPGF 20 (142)
T ss_pred Cceeehhhhhhhhhhhcccc
Confidence 68999999999999998876
No 146
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=91.48 E-value=8.5 Score=36.85 Aligned_cols=117 Identities=20% Similarity=0.136 Sum_probs=71.6
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +...+++.+++.... ....+-|+.--+.++++.+.+.|..+...+.......
T Consensus 127 v~iH~r~--a~~~~l~il~~~~~~-----~~~~i~H~f~g~~~~~~~~~~~g~~~S~~~~~~~~~~-------------- 185 (255)
T PF01026_consen 127 VSIHCRK--AHEELLEILKEYGPP-----NLRVIFHCFSGSPEEAKKFLDLGCYFSFSGAITFKNS-------------- 185 (255)
T ss_dssp EEEEEES--HHHHHHHHHHHTTGG-----TSEEEETT--S-HHHHHHHHHTTEEEEEEGGGGSTTS--------------
T ss_pred EEEecCC--cHHHHHHHHHhcccc-----ceeEEEecCCCCHHHHHHHHhcCceEEeccccccccc--------------
Confidence 8999854 666777777665311 1257889999999999999999999998887443211
Q ss_pred hchHHHHHHH-CCC-eeeecCCCCCCCC----------ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 430 ESYLFQSLLA-NNA-LLALGSDWPVADI----------NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 430 ~~~~~~~l~~-~Gv-~~~~GTD~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
...+++.+ -.. ++.+-||+|.... .....+...+.. -.+++++++.+....|..+
T Consensus 186 --~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~-----------~~~~~~e~~~~~~~~N~~r 252 (255)
T PF01026_consen 186 --KKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAE-----------IKGISLEELAQIIYENAKR 252 (255)
T ss_dssp --HHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHH-----------HHTSTHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHH-----------HcCCCHHHHHHHHHHHHHH
Confidence 11223332 222 5889999986422 122222222221 1258999999999999888
Q ss_pred Hcc
Q 008993 498 ACF 500 (547)
Q Consensus 498 ~lg 500 (547)
++|
T Consensus 253 ~f~ 255 (255)
T PF01026_consen 253 LFG 255 (255)
T ss_dssp HHT
T ss_pred HhC
Confidence 775
No 147
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=90.30 E-value=18 Score=34.92 Aligned_cols=83 Identities=14% Similarity=0.201 Sum_probs=45.3
Q ss_pred HHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHH-HhhCh--------hhhhhhchHHHH
Q 008993 366 MYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSAR-KKLGV--------DRAERESYLFQS 436 (547)
Q Consensus 366 ~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~-~~~g~--------~~~~~~~~~~~~ 436 (547)
.++.+.++.+. -+..++|+..-+.-++-+-...++...++|++...+..... ..+.+ .|. .....++.
T Consensus 158 vl~pl~~~fP~--LKIV~EHiTT~dav~~v~~~~~nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~-~hr~AL~~ 234 (344)
T COG0418 158 VLEPLRQRFPK--LKIVLEHITTKDAVEYVKDANNNLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRE-THREALRE 234 (344)
T ss_pred HHHHHHhhCCc--ceEEEEEeccHHHHHHHHhcCcceeeEeehhheeeehhhhhcCCCCcceeeeccccch-hhHHHHHH
Confidence 45555555543 37888898765444444333444788888888765543322 10000 111 22224555
Q ss_pred HHHCCC-eeeecCCCC
Q 008993 437 LLANNA-LLALGSDWP 451 (547)
Q Consensus 437 l~~~Gv-~~~~GTD~~ 451 (547)
+...|- +..+|||+.
T Consensus 235 aa~sg~~kfFlGtDSA 250 (344)
T COG0418 235 AATSGHPKFFLGTDSA 250 (344)
T ss_pred HHhcCCCcEEecCCCC
Confidence 555554 799999953
No 148
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=86.56 E-value=5.7 Score=37.58 Aligned_cols=114 Identities=12% Similarity=-0.004 Sum_probs=69.3
Q ss_pred CceEeecCC------CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh---hhhchHHHHHHHCCCeeeecCCC
Q 008993 380 RFRIEHAQH------LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA---ERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 380 ~~~i~H~~~------~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~---~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
-..+.|... .....++.+++.|+.+.++-....... +..|. ......++...+.|+++++|||+
T Consensus 104 vdIi~hp~~~~~~~~~~~~~~~~a~~~gv~lEIn~s~~~~~~-------~~~r~~~~~~~~~~~~~~~~~g~piiisSdA 176 (237)
T PRK00912 104 VDILSHPYTKRKDSGINHVLAKEAARNNVAIEFNLRDILKSR-------GGRRARTLSNFRDNLALARKYDFPLVLTSGA 176 (237)
T ss_pred CcEEeCccccCCCCCcCHHHHHHHHHCCeEEEEEchHhhhhc-------ccHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 446667653 345667888899998887754321100 00111 01112346667889999999997
Q ss_pred CCCC-CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC-CCcccccCCC
Q 008993 451 PVAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE-NDVGSLSPGK 512 (547)
Q Consensus 451 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~-~~~GsI~~Gk 512 (547)
.... ...+...... ....|++.++++.+.+.+|.+.+..- .+.+.|.+|.
T Consensus 177 h~~~~l~~~~~~~~l------------~~~~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (237)
T PRK00912 177 MSCYDLRSPREMIAL------------AELFGMEEDEALKALSYYPESIIKKNRNRKNYVIEGV 228 (237)
T ss_pred CcccccCCHHHHHHH------------HHHcCCCHHHHHHHHHHhHHHHHHhhccCCCcccccE
Confidence 5432 2223333222 24568999999999999999998874 3345565554
No 149
>PRK07328 histidinol-phosphatase; Provisional
Probab=83.73 E-value=24 Score=34.04 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=39.8
Q ss_pred CceEeecCCCC--------------hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeee
Q 008993 380 RFRIEHAQHLA--------------SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLA 445 (547)
Q Consensus 380 ~~~i~H~~~~~--------------~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~ 445 (547)
-..+.|..... .+.++.+++.|+.+.++......... ... ....-++.+.+.|++++
T Consensus 155 ~dvlgH~d~i~~~~~~~~~~~~~~~~~il~~~~~~g~~lEiNt~~~r~~~~---~~y------p~~~il~~~~~~g~~it 225 (269)
T PRK07328 155 FDIIGHPDLIKKFGHRPREDLTELYEEALDVIAAAGLALEVNTAGLRKPVG---EIY------PSPALLRACRERGIPVV 225 (269)
T ss_pred CCEeeCccHHHHcCCCCchhHHHHHHHHHHHHHHcCCEEEEEchhhcCCCC---CCC------CCHHHHHHHHHcCCCEE
Confidence 46778887532 35567888999999888742211000 000 11123678889999999
Q ss_pred ecCCCC
Q 008993 446 LGSDWP 451 (547)
Q Consensus 446 ~GTD~~ 451 (547)
+|||+-
T Consensus 226 igSDAH 231 (269)
T PRK07328 226 LGSDAH 231 (269)
T ss_pred EeCCCC
Confidence 999973
No 150
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=83.35 E-value=23 Score=32.90 Aligned_cols=47 Identities=15% Similarity=0.214 Sum_probs=25.3
Q ss_pred HHHHHHHHHhcCCCCCCceEeecCCCChhHH-HHHHhCCcEEEecCcccc
Q 008993 364 LDMYKSVVVTTGKRDQRFRIEHAQHLASGTA-ARFGDQGIVASMQPQHLL 412 (547)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l-~~~~~~g~~~~~~p~~~~ 412 (547)
+..+.++.++.+ .-+..++||...+.-.. +...+..+...++++++.
T Consensus 155 lptll~LhqrfP--~LKivlEHcTt~dAv~~ve~a~~~sVaaTvTahHL~ 202 (344)
T KOG2902|consen 155 LPTLLQLHQRFP--QLKIVLEHCTTMDAVNFVESAKEGSVAATVTAHHLL 202 (344)
T ss_pred HHHHHHHHHhCc--cceeHHHhcccHHHHHHHHhhcCCceeeEeehheeE
Confidence 333444444443 33667788887654332 333344466667777654
No 151
>PRK08392 hypothetical protein; Provisional
Probab=81.09 E-value=46 Score=30.80 Aligned_cols=43 Identities=12% Similarity=0.036 Sum_probs=30.3
Q ss_pred HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 394 AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 394 l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
++.+++.|+.+.++.... . +.+ .-++.+.+.|+++++|||+-.
T Consensus 143 ~~~~~~~g~~lEiNt~~~----------~-p~~-----~~l~~~~~~G~~~~igSDAH~ 185 (215)
T PRK08392 143 LDLAEAYGKAFEISSRYR----------V-PDL-----EFIRECIKRGIKLTFASDAHR 185 (215)
T ss_pred HHHHHHhCCEEEEeCCCC----------C-CCH-----HHHHHHHHcCCEEEEeCCCCC
Confidence 577888999998875311 0 101 136778899999999999754
No 152
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=78.50 E-value=68 Score=31.20 Aligned_cols=232 Identities=15% Similarity=0.078 Sum_probs=112.8
Q ss_pred HHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCc----------cchhhHHHHHHh
Q 008993 249 LLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL----------ETWSSLADLINK 318 (547)
Q Consensus 249 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 318 (547)
+..-.....++|..++.|+....-| +....+++++++-++.+.....+-. .+.+++.+++..
T Consensus 50 ~~~e~~~~~a~Gg~TIVD~T~~~~G--------Rdv~~m~~vs~atglnIV~~TGfy~~~~~p~~~~~~~i~~~ae~~v~ 121 (316)
T COG1735 50 AIAELKRLMARGGQTIVDATNIGIG--------RDVLKMRRVAEATGLNIVAATGFYKAAFHPEYFALRPIEELAEFVVK 121 (316)
T ss_pred HHHHHHHHHHcCCCeEeeCCccccC--------cCHHHHHHHHHHhCCcEEEeccccccccchhHHhhCCHHHHHHHHHH
Confidence 3334556667899999998754333 3335566666666677776654321 223444444433
Q ss_pred cCC-C-CCCcEEEceEEEEEcCC-cCc-----chhhhhc-------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceE
Q 008993 319 TGH-V-LSDWVYLGGVKAFADGS-LGS-----NSALFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRI 383 (547)
Q Consensus 319 ~~~-~-~~~~~~~~~~~~~~d~~-~~~-----~~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 383 (547)
-.+ . ..+-+..+=++...+.. +.. ..++... +.+|..... ...+.++- +...+....+..+
T Consensus 122 ei~~Gi~gT~ikAGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt---~g~eq~~i-l~~egvdl~~v~i 197 (316)
T COG1735 122 EIEEGIAGTGIKAGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGT---MGLEQLRI-LAEEGVDLRKVSI 197 (316)
T ss_pred HHHhcccCCccccceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchh---hhHHHHHH-HHHcCCChhHeeE
Confidence 222 1 12223333333332211 111 1111111 777765333 33333332 2333566678999
Q ss_pred eecCC-CChhH-HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC--eeeecCC-CCCCCCChH
Q 008993 384 EHAQH-LASGT-AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSD-WPVADINPL 458 (547)
Q Consensus 384 ~H~~~-~~~~~-l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv--~~~~GTD-~~~~~~~~~ 458 (547)
.|+.- .++-. .+.++.+|+.+...-- -. + .+.++ . .+..++..+.+.|. .+.+|-| +..+..-+.
T Consensus 198 gH~d~n~dd~~y~~~l~~~Ga~l~fD~i-G~---d----~y~pd-~-~r~~~~~~l~~~gy~d~i~ls~d~~~~~~~~~~ 267 (316)
T COG1735 198 GHMDPNTDDVYYQKKLADRGAFLEFDRI-GK---D----KYYPD-E-DRIAPLLELVARGYADLILLSHDDICLSDDVFL 267 (316)
T ss_pred eccCCCCChHHHHHHHHhcCceEEeccc-Cc---c----ccCcH-H-HhhhhHHHHHHhhHhhheecccchhhhhhhHHH
Confidence 99994 44433 3567778987764321 00 0 00000 0 33346777888887 4666623 222211122
Q ss_pred HHHHHHHcccCCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 459 CAIRTAMKRIPPGWD----NAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 459 ~~~~~~~~~~~~~~~----~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
..+..........+- ....+..|++-+++=++.--||++.|..+
T Consensus 268 ~~~~~~~~~~g~~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~~ 315 (316)
T COG1735 268 KSMLKANGGWGYGYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTAK 315 (316)
T ss_pred HhhhhhcCCcccchhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhccC
Confidence 222211111100000 00134679997776677778999998653
No 153
>PRK07945 hypothetical protein; Provisional
Probab=76.45 E-value=66 Score=32.18 Aligned_cols=49 Identities=12% Similarity=0.160 Sum_probs=33.8
Q ss_pred hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC
Q 008993 391 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA 453 (547)
Q Consensus 391 ~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~ 453 (547)
++.++.+++.|+.+.++..... ..+. ..-++.+.+.|+++++|||+-..
T Consensus 248 ~~i~~a~~e~g~~lEINt~~~r---------~~P~-----~~il~~a~e~G~~vtigSDAH~p 296 (335)
T PRK07945 248 EAVFAACREHGTAVEINSRPER---------RDPP-----TRLLRLALDAGCLFSIDTDAHAP 296 (335)
T ss_pred HHHHHHHHHhCCEEEEeCCCCC---------CCCh-----HHHHHHHHHcCCeEEecCCCCCh
Confidence 4567888999999988864221 0111 11367888999999999997553
No 154
>PRK08609 hypothetical protein; Provisional
Probab=73.41 E-value=86 Score=34.02 Aligned_cols=85 Identities=11% Similarity=0.064 Sum_probs=48.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CC---------hhHHHHHHhCCcEEEecCccccCChhHH
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH--LA---------SGTAARFGDQGIVASMQPQHLLDDADSA 418 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~--~~---------~~~l~~~~~~g~~~~~~p~~~~~~~~~~ 418 (547)
..+|.......+...+.+.++.. ++ .-..+.|... +. ++.++.+++.|+.+.++..+..
T Consensus 434 ~SvH~~~~~~~~~~~~~l~~a~~-~~---~~dILaHpd~rli~~~~~~~~d~~~i~~~a~~~G~~lEINa~~~r------ 503 (570)
T PRK08609 434 AAIHSSFSQSEEEIMKRLENACR-NP---YVRLIAHPTGRLIGRRDGYDVNIDQLIELAKETNTALELNANPNR------ 503 (570)
T ss_pred EEeecCCCCCHHHHHHHHHHHhc-CC---CceEEECCCccccccCCCchHHHHHHHHHHHHhCCEEEEcCCccc------
Confidence 67775433233333344433332 22 2457778761 11 2334566889999888865321
Q ss_pred HHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 419 RKKLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 419 ~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
.+ .....++.+.+.|+++++|||+..
T Consensus 504 ---~~-----~~~~~~~~~~e~Gv~i~igSDAH~ 529 (570)
T PRK08609 504 ---LD-----LSAEHLKKAQEAGVKLAINTDAHH 529 (570)
T ss_pred ---cC-----ccHHHHHHHHHcCCEEEEECCCCC
Confidence 11 111246889999999999999754
No 155
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=67.96 E-value=1.1e+02 Score=28.87 Aligned_cols=62 Identities=11% Similarity=0.002 Sum_probs=40.2
Q ss_pred CCCceEeecCC-------------CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCee
Q 008993 378 DQRFRIEHAQH-------------LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALL 444 (547)
Q Consensus 378 ~~~~~i~H~~~-------------~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~ 444 (547)
..-..+.|... ...+.++.+.+.|+.+.++..... ......-++.+.+.|+.+
T Consensus 124 ~~v~il~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~aleins~~~~--------------~~~~~~~~~~~~e~G~~~ 189 (237)
T COG1387 124 GAVDILAHPGGRLLGRIDRGAYKEDIEELIELAEKNGKALEINSRPGR--------------LDPNSEILRLARELGVKL 189 (237)
T ss_pred CCccEEecCCccccccccccccHHHHHHHHHHHHHhCcEEeecCCcCc--------------cCchHHHHHHHHHhCCeE
Confidence 44567778776 224556778889988887665110 001222356777889999
Q ss_pred eecCCCCCC
Q 008993 445 ALGSDWPVA 453 (547)
Q Consensus 445 ~~GTD~~~~ 453 (547)
++|||+-..
T Consensus 190 ~i~tDaH~~ 198 (237)
T COG1387 190 AIGTDAHRP 198 (237)
T ss_pred EeecCcCCh
Confidence 999997544
No 156
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=62.87 E-value=1.3e+02 Score=28.01 Aligned_cols=50 Identities=12% Similarity=0.029 Sum_probs=40.3
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecC
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGS 448 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GT 448 (547)
+..+.=++.++.++++...+.|..+.+.|.+.. .-++...+.|++..-|.
T Consensus 70 ~~~vGaGTVl~~e~a~~a~~aGA~FiVsP~~~~-------------------~v~~~~~~~~i~~iPG~ 119 (222)
T PRK07114 70 GMILGVGSIVDAATAALYIQLGANFIVTPLFNP-------------------DIAKVCNRRKVPYSPGC 119 (222)
T ss_pred CeEEeeEeCcCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHHcCCCEeCCC
Confidence 568888899999999999999999999998542 12456778888777765
No 157
>PF07908 D-aminoacyl_C: D-aminoacylase, C-terminal region; InterPro: IPR012855 D-aminoacylase (Q9AGH8 from SWISSPROT, 3.5.1.81 from EC) hydrolyses a wide variety of N-acyl derivatives of neutral D-amino acids, in a zinc-dependent manner. The enzyme is composed of a small beta-barrel domain and a larger catalytic alpha/beta-barrel that contains a short alpha/beta insert. The overall structure shares significant similarity to the alpha/beta-barrel amidohydrolase superfamily, in which the beta-strands in both barrels superimpose well []. The C-terminal region featured in this entry forms part of the beta-barrel domain, together with a short N-terminal segment. This domain does not seem to contribute to the substrate-binding site or to be involved in the catalytic process.; GO: 0008270 zinc ion binding, 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; PDB: 3GIQ_B 3GIP_B 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A.
Probab=59.40 E-value=12 Score=25.33 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=13.2
Q ss_pred CCeEEEEEECcEEeCC
Q 008993 532 SASIEATYVSGVQAYP 547 (547)
Q Consensus 532 ~~~v~~v~v~G~~v~~ 547 (547)
...+.+|||||+++++
T Consensus 17 ~~GI~~V~VNG~~vv~ 32 (48)
T PF07908_consen 17 AEGIDYVFVNGQIVVE 32 (48)
T ss_dssp -BSEEEEEETTEEEEC
T ss_pred CCCEEEEEECCEEEEE
Confidence 5589999999999864
No 158
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=55.46 E-value=1.9e+02 Score=27.48 Aligned_cols=51 Identities=20% Similarity=0.118 Sum_probs=31.4
Q ss_pred hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCC
Q 008993 392 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 451 (547)
Q Consensus 392 ~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~ 451 (547)
+.++.+++.|+.+.++...... +....-....-++.+.+.|+++++|||+-
T Consensus 189 ~il~~~~~~g~~lEiNt~g~r~---------~~~~~yP~~~il~~~~~~g~~itlgSDAH 239 (253)
T TIGR01856 189 RILKLVASQGKALEFNTSGLRK---------PLEEAYPSKELLNLAKELGIPLVLGSDAH 239 (253)
T ss_pred HHHHHHHHcCCEEEEEcHhhcC---------CCCCCCCCHHHHHHHHHcCCCEEecCCCC
Confidence 4457788999998887642110 00000011113577888999999999974
No 159
>PRK06740 histidinol-phosphatase; Validated
Probab=52.68 E-value=2.5e+02 Score=28.02 Aligned_cols=50 Identities=14% Similarity=0.147 Sum_probs=30.3
Q ss_pred HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCC
Q 008993 394 AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 451 (547)
Q Consensus 394 l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~ 451 (547)
++.+++.|+.+.++......... .. ..+ ...-++.+.+.|+++++|||+-
T Consensus 245 ~~a~~~~g~~lEINt~~~~r~~~--~e-~yP-----~~~il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 245 ARALVETNTATEINAGLYYRYPV--RE-MCP-----SPLFLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHcCCEEEEECccccCCCC--CC-CCc-----CHHHHHHHHHCCCeEEEeeCCC
Confidence 35678899999888753111000 00 000 0113578889999999999973
No 160
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=51.91 E-value=2e+02 Score=26.56 Aligned_cols=61 Identities=10% Similarity=-0.042 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCee
Q 008993 365 DMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALL 444 (547)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~ 444 (547)
++++++.+.++ +..+.-++.+++++++...+.|..+.+.|.... .-++...+.|+++
T Consensus 53 e~I~~l~~~~p----~~lIGAGTVL~~~q~~~a~~aGa~fiVsP~~~~-------------------ev~~~a~~~~ip~ 109 (211)
T COG0800 53 EAIRALAKEFP----EALIGAGTVLNPEQARQAIAAGAQFIVSPGLNP-------------------EVAKAANRYGIPY 109 (211)
T ss_pred HHHHHHHHhCc----ccEEccccccCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHhCCCcc
Confidence 33444444433 668889999999999999999999999998542 2356777888887
Q ss_pred eecC
Q 008993 445 ALGS 448 (547)
Q Consensus 445 ~~GT 448 (547)
.-|.
T Consensus 110 ~PG~ 113 (211)
T COG0800 110 IPGV 113 (211)
T ss_pred cCCC
Confidence 7766
No 161
>PRK08123 histidinol-phosphatase; Reviewed
Probab=46.35 E-value=2.8e+02 Score=26.68 Aligned_cols=54 Identities=15% Similarity=0.060 Sum_probs=32.6
Q ss_pred hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 391 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 391 ~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
.+.++.+++.|+.+.++....... ..+ +.. ....-++.+.+.|+++++|||+-.
T Consensus 200 ~~il~~~~~~g~~lEINtsgl~~~------~~~-~~y-P~~~il~~~~e~g~~itlgSDAH~ 253 (270)
T PRK08123 200 EDILALIKKRGYELDFNTAGLRKP------YCG-EPY-PPGEIITLAKKLGIPLVYGSDAHS 253 (270)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCC------CCC-CCC-CcHHHHHHHHHcCCCEEEeCCCCC
Confidence 344678889999998886422100 000 000 111135778889999999999743
No 162
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=42.19 E-value=2.1e+02 Score=26.68 Aligned_cols=91 Identities=18% Similarity=0.074 Sum_probs=56.5
Q ss_pred CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhch----HHHHHHHCCCeeeecCCCCCC--CCChHHHHH
Q 008993 389 LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESY----LFQSLLANNALLALGSDWPVA--DINPLCAIR 462 (547)
Q Consensus 389 ~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~----~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~ 462 (547)
++...++.+++.++.+...=.... +..|..|+ +... .++...+.++++.++||+... -.+|..-+.
T Consensus 114 ldh~~a~laa~~~valeisl~~ll-------~~~g~~Ra-~~l~~lr~~lrl~rk~~v~ivvtS~A~s~~elrsP~dv~s 185 (229)
T COG1603 114 LDHVLARLAAEKGVALEISLRPLL-------RSSGYRRA-RLLSFLRSLLRLARKYDVPIVVTSDAESPLELRSPRDVIS 185 (229)
T ss_pred ccHHHHHHHHhcCceEEEehHHhh-------ccchhHHH-HHHHHHHHHHHHHHhcCCCEEEeCCCCChhhhcChhhHHH
Confidence 444667788888887765432221 11222222 1111 344555789999999996332 123444443
Q ss_pred HHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 463 TAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
.+ .-.|++.+||-.+.+..|.++|.
T Consensus 186 l~-------------~~lG~e~~ea~~~~~~~p~~iL~ 210 (229)
T COG1603 186 LA-------------KVLGLEDDEAKKSLSEYPRLILR 210 (229)
T ss_pred HH-------------HHhCCCHHHHHHHHHHhHHHHHH
Confidence 32 34478999999999999999998
No 163
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=40.73 E-value=2.9e+02 Score=25.32 Aligned_cols=62 Identities=15% Similarity=0.118 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe
Q 008993 364 LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL 443 (547)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~ 443 (547)
++.++++.+.++ ...+.=++.++.++++...+.|..+.+.|.... .-++...+.|++
T Consensus 43 ~~~I~~l~~~~~----~~~vGAGTVl~~e~a~~ai~aGA~FivSP~~~~-------------------~vi~~a~~~~i~ 99 (201)
T PRK06015 43 LDAIRAVAAEVE----EAIVGAGTILNAKQFEDAAKAGSRFIVSPGTTQ-------------------ELLAAANDSDVP 99 (201)
T ss_pred HHHHHHHHHHCC----CCEEeeEeCcCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHHcCCC
Confidence 344444444432 567888899999999999999999999998442 124567788887
Q ss_pred eeecC
Q 008993 444 LALGS 448 (547)
Q Consensus 444 ~~~GT 448 (547)
..-|-
T Consensus 100 ~iPG~ 104 (201)
T PRK06015 100 LLPGA 104 (201)
T ss_pred EeCCC
Confidence 77665
No 164
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=40.66 E-value=3.5e+02 Score=26.19 Aligned_cols=56 Identities=20% Similarity=0.331 Sum_probs=32.6
Q ss_pred HHHHH-CC-CeeeecCCCCCCCCCh-HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 435 QSLLA-NN-ALLALGSDWPVADINP-LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 435 ~~l~~-~G-v~~~~GTD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+.+.+ .| -++..|||.|..+... +.+...+.... -.+ +..+=-+.-..|++++.++
T Consensus 220 e~~i~~fg~dR~vfGSdwPv~~l~~~~~~~~~~~~~~----------v~~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 220 EELIELFGWDRFVFGSDWPVTSLESDFASWVAATREL----------VPG-DAAERARILVDNARRLYRL 278 (279)
T ss_pred HHHHHhcCccceEecCCCCcccccCChHHHHHHHHHH----------cCC-CHHHHHHHHhhCHHHHhCC
Confidence 44444 56 4899999999765332 22322222111 011 4666677788888887764
No 165
>PF15581 Imm35: Immunity protein 35
Probab=39.81 E-value=91 Score=23.94 Aligned_cols=49 Identities=10% Similarity=0.107 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 480 ERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 480 ~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
-|||-+|+++..-.-+|+-- -+++-.-|.-|++.|+ .|+..+.+|+++.
T Consensus 44 RGl~~~qV~~kl~ava~~~~-----~~~~vvKkE~~~Iwfd-------------~VrF~f~~GrL~~ 92 (93)
T PF15581_consen 44 RGLPEEQVLYKLEAVAAKGP-----EAKIVVKKEGNIIWFD-------------EVRFNFDEGRLVS 92 (93)
T ss_pred cCCCHHHHHHHHHHHHhcCC-----CcceEEEecCCeEEEc-------------ceeEEeccceEec
Confidence 47999999998877666533 4566667788899888 6777888888763
No 166
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=38.87 E-value=2.6e+02 Score=26.26 Aligned_cols=112 Identities=13% Similarity=0.023 Sum_probs=54.3
Q ss_pred HHHHHHhcCCCCCCceEeecCCC--C-hhHHHHHHhC-CcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHH-HCC
Q 008993 367 YKSVVVTTGKRDQRFRIEHAQHL--A-SGTAARFGDQ-GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLL-ANN 441 (547)
Q Consensus 367 ~~~~~~~~~~~~~~~~i~H~~~~--~-~~~l~~~~~~-g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~-~~G 441 (547)
+..+..+++ +-+..+.|+-.. . .+.++.+.+. ++.+.+.-......... .. .....++.+. ..|
T Consensus 155 ~~~~~~~~P--~l~ii~~H~G~~~~~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~-----~~----~~~~~l~~~~~~~g 223 (273)
T PF04909_consen 155 LEELLERFP--DLRIILAHLGGPFPWWEEALRLLDRFPNVYVDLSGIPPFWYFWP-----PS----FDRPFLRRAVDEFG 223 (273)
T ss_dssp HTTHHHHST--TSEEEESGGGTTHHHHHHHHHHHHHHTTEEEECHSHHSSEEEET-----TH----HCHHHHHHHHHHHT
T ss_pred HHHHHHHhc--CCeEEEecCcccchhHHHHHHHHHhCCcccccccccccccccCc-----cc----ccHHHHHHHHHHhC
Confidence 334445544 347778888877 2 2334444443 45555433110000000 00 1112334444 344
Q ss_pred C-eeeecCCCCCCCCC-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 442 A-LLALGSDWPVADIN-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 442 v-~~~~GTD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
. ++.+|||.|..... +.......... ..++.++.=+....|+++.+|+
T Consensus 224 ~drilfGSD~P~~~~~~~~~~~~~~~~~------------~~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 224 PDRILFGSDYPHPDGASPYEYIWEAYFL------------DDLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp GGGEEEE--TTSSTHHHHHHHHHHHHHH------------HHSSHHHHHHHHTHHHHHHHTC
T ss_pred CceEEecCCCCCCCccccHHHHHHhhhc------------cCCCHHHHHHHHhHhHHHHcCc
Confidence 4 79999999876542 22222211110 0158888888888999998875
No 167
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=33.13 E-value=61 Score=20.78 Aligned_cols=16 Identities=25% Similarity=0.632 Sum_probs=13.6
Q ss_pred EEEEECCEEEEeeChh
Q 008993 66 SMAIKNGRIVSVGNYS 81 (547)
Q Consensus 66 ~I~I~~GrI~~ig~~~ 81 (547)
.|.|+||+|+.|...+
T Consensus 19 ~iiiqdG~vvQIe~~E 34 (38)
T PF10055_consen 19 TIIIQDGRVVQIEKTE 34 (38)
T ss_pred EEEEECCEEEEEEhhh
Confidence 6888999999998654
No 168
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=32.38 E-value=4.1e+02 Score=24.62 Aligned_cols=62 Identities=16% Similarity=0.085 Sum_probs=33.7
Q ss_pred CceEeecCCC-----ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 380 RFRIEHAQHL-----ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 380 ~~~i~H~~~~-----~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
...|.|..-- ++..+..+-..|+..-++..+.. ...|... ..-...+.++|+.--++||+-.
T Consensus 131 ~PIIAHPERn~~i~kn~~~lyeLid~ga~sQvts~Sl~-------GlfGK~i----kK~a~~~iE~~L~hFiASDAHn 197 (254)
T COG4464 131 IPIIAHPERNRAIQKNPYLLYELIDKGAYSQVTSSSLA-------GLFGKKI----KKFALQLIEANLVHFIASDAHN 197 (254)
T ss_pred eeeeechhhHHHHHhChHHHHHHHhcccceeechHhHH-------hhhhHHH----HHHHHHHHHcccceeeeccccc
Confidence 4466665521 22333444456665544544332 2334321 1234578999999999999643
No 169
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=28.00 E-value=4.9e+02 Score=24.08 Aligned_cols=66 Identities=15% Similarity=-0.051 Sum_probs=47.3
Q ss_pred HHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe
Q 008993 364 LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL 443 (547)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~ 443 (547)
+++++++.+.++. .+...+.=++.++.++++...+.|..+.+.|.++. .-++...+.|++
T Consensus 52 ~~~i~~l~~~~~~-~p~~~vGaGTV~~~~~~~~a~~aGA~FivsP~~~~-------------------~v~~~~~~~~i~ 111 (213)
T PRK06552 52 SEVIKELVELYKD-DPEVLIGAGTVLDAVTARLAILAGAQFIVSPSFNR-------------------ETAKICNLYQIP 111 (213)
T ss_pred HHHHHHHHHHcCC-CCCeEEeeeeCCCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHHcCCC
Confidence 3445454444321 12567888899999999999999999999998542 124567788998
Q ss_pred eeecCC
Q 008993 444 LALGSD 449 (547)
Q Consensus 444 ~~~GTD 449 (547)
...|+-
T Consensus 112 ~iPG~~ 117 (213)
T PRK06552 112 YLPGCM 117 (213)
T ss_pred EECCcC
Confidence 888773
No 170
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=27.58 E-value=2.4e+02 Score=25.76 Aligned_cols=62 Identities=10% Similarity=-0.009 Sum_probs=42.6
Q ss_pred HHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe
Q 008993 364 LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL 443 (547)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~ 443 (547)
+++++...+.++ ...+.=++.++.++++...+.|..+.+.|.+.. .-++...+.|++
T Consensus 47 ~~~I~~l~~~~p----~~~vGAGTV~~~e~a~~a~~aGA~FivSP~~~~-------------------~v~~~~~~~~i~ 103 (196)
T PF01081_consen 47 LEAIEALRKEFP----DLLVGAGTVLTAEQAEAAIAAGAQFIVSPGFDP-------------------EVIEYAREYGIP 103 (196)
T ss_dssp HHHHHHHHHHHT----TSEEEEES--SHHHHHHHHHHT-SEEEESS--H-------------------HHHHHHHHHTSE
T ss_pred HHHHHHHHHHCC----CCeeEEEeccCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHHcCCc
Confidence 344544444433 578889999999999999999999999998442 124677788998
Q ss_pred eeecC
Q 008993 444 LALGS 448 (547)
Q Consensus 444 ~~~GT 448 (547)
..-|-
T Consensus 104 ~iPG~ 108 (196)
T PF01081_consen 104 YIPGV 108 (196)
T ss_dssp EEEEE
T ss_pred ccCCc
Confidence 88776
No 171
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=27.46 E-value=4.9e+02 Score=23.92 Aligned_cols=62 Identities=15% Similarity=0.037 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe
Q 008993 364 LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL 443 (547)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~ 443 (547)
++.++++.+.++ +..+.=++.++.++++...+.|..+.+.|.++. .-++...+.|++
T Consensus 47 ~~~i~~l~~~~~----~~~vGAGTVl~~~~a~~a~~aGA~FivsP~~~~-------------------~v~~~~~~~~i~ 103 (204)
T TIGR01182 47 LDAIRLLRKEVP----DALIGAGTVLNPEQLRQAVDAGAQFIVSPGLTP-------------------ELAKHAQDHGIP 103 (204)
T ss_pred HHHHHHHHHHCC----CCEEEEEeCCCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHHcCCc
Confidence 334444444432 467888899999999999999999999998542 124567788887
Q ss_pred eeecC
Q 008993 444 LALGS 448 (547)
Q Consensus 444 ~~~GT 448 (547)
..-|.
T Consensus 104 ~iPG~ 108 (204)
T TIGR01182 104 IIPGV 108 (204)
T ss_pred EECCC
Confidence 77654
No 172
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=26.21 E-value=5.3e+02 Score=23.86 Aligned_cols=62 Identities=15% Similarity=0.072 Sum_probs=43.2
Q ss_pred HHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe
Q 008993 364 LDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL 443 (547)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~ 443 (547)
++.++++.+.++ +..+.=+..+++++++...+.|..+.+.|.+.. .-++...+.|+.
T Consensus 54 ~~~I~~l~~~~p----~~~IGAGTVl~~~~a~~a~~aGA~FivsP~~~~-------------------~vi~~a~~~~i~ 110 (212)
T PRK05718 54 LEAIRLIAKEVP----EALIGAGTVLNPEQLAQAIEAGAQFIVSPGLTP-------------------PLLKAAQEGPIP 110 (212)
T ss_pred HHHHHHHHHHCC----CCEEEEeeccCHHHHHHHHHcCCCEEECCCCCH-------------------HHHHHHHHcCCC
Confidence 334444444433 467778889999999999999999999998542 124556677776
Q ss_pred eeecC
Q 008993 444 LALGS 448 (547)
Q Consensus 444 ~~~GT 448 (547)
..-|.
T Consensus 111 ~iPG~ 115 (212)
T PRK05718 111 LIPGV 115 (212)
T ss_pred EeCCC
Confidence 66555
No 173
>PRK05588 histidinol-phosphatase; Provisional
Probab=25.73 E-value=96 Score=29.53 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=34.0
Q ss_pred hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe-eeecCCCCC
Q 008993 391 SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL-LALGSDWPV 452 (547)
Q Consensus 391 ~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~-~~~GTD~~~ 452 (547)
.+.++.+++.|+.+.++......... .. ...+.++.+.+.|++ +++|||+-.
T Consensus 169 ~~il~~~~~~g~~lEINt~~l~~~~~-----~~-----~~~~~l~~~~~~g~~~i~lgSDAH~ 221 (255)
T PRK05588 169 DEILKVLIEKEKVLEINTRRLDDKRS-----VE-----NLVKIYKRFYELGGKYITLGSDAHN 221 (255)
T ss_pred HHHHHHHHHcCCEEEEECcccCCCCC-----CC-----CHHHHHHHHHHcCCcEEEEECCCCC
Confidence 34567888999999988753221000 01 112357889999998 799999743
No 174
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=25.23 E-value=1.4e+02 Score=22.65 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=27.4
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEe
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSV 77 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~i 77 (547)
..+.+.++++++++.++....-+.+.|++.-|..|
T Consensus 41 ~~MNl~L~~~~~~~~~~~~~~~~~v~IRG~nI~yI 75 (78)
T cd01733 41 AFMNIRLAKVTIIDRNGKQVQVEEIMVTGRNIRYV 75 (78)
T ss_pred CCceeEEEEEEEEcCCCceeECCcEEEECCEEEEE
Confidence 55788999999888766544456899999988877
No 175
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism]
Probab=24.60 E-value=4.4e+02 Score=26.31 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHH
Q 008993 358 RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSL 437 (547)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 437 (547)
...+.+.++.+......++ ...+..+ .+++++++++++.|+....+= ...+.+.+........-..+.--++.+
T Consensus 115 ~~~~~i~~~v~~Vk~~~~l---e~c~slG-~l~~eq~~~L~~aGvd~ynhN--LeTs~~~y~~I~tt~t~edR~~tl~~v 188 (335)
T COG0502 115 RDMEEVVEAIKAVKEELGL---EVCASLG-MLTEEQAEKLADAGVDRYNHN--LETSPEFYENIITTRTYEDRLNTLENV 188 (335)
T ss_pred ccHHHHHHHHHHHHHhcCc---HHhhccC-CCCHHHHHHHHHcChhheecc--cccCHHHHcccCCCCCHHHHHHHHHHH
Confidence 4556666777666655553 4455555 778888999999986433220 001122222222211111333356777
Q ss_pred HHCCCeeeec
Q 008993 438 LANNALLALG 447 (547)
Q Consensus 438 ~~~Gv~~~~G 447 (547)
.++|+.++.|
T Consensus 189 k~~Gi~vcsG 198 (335)
T COG0502 189 REAGIEVCSG 198 (335)
T ss_pred HHcCCccccc
Confidence 8888876654
No 176
>PRK06256 biotin synthase; Validated
Probab=20.55 E-value=8.4e+02 Score=24.15 Aligned_cols=59 Identities=10% Similarity=-0.039 Sum_probs=32.5
Q ss_pred ecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeee
Q 008993 385 HAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLA 445 (547)
Q Consensus 385 H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~ 445 (547)
+.-.++++.++++++.|+.-.... ... +.+.+...............++.+.++|+.+.
T Consensus 146 ~~g~l~~e~l~~LkeaG~~~v~~~-lEt-s~~~~~~i~~~~t~~~~i~~i~~a~~~Gi~v~ 204 (336)
T PRK06256 146 CLGLLTEEQAERLKEAGVDRYNHN-LET-SRSYFPNVVTTHTYEDRIDTCEMVKAAGIEPC 204 (336)
T ss_pred cCCcCCHHHHHHHHHhCCCEEecC-Ccc-CHHHHhhcCCCCCHHHHHHHHHHHHHcCCeec
Confidence 334578888999999986433221 111 22333322222222244456788889998643
No 177
>PRK07329 hypothetical protein; Provisional
Probab=20.06 E-value=1.6e+02 Score=27.89 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=32.5
Q ss_pred hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCe-eeecCCCCC
Q 008993 392 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNAL-LALGSDWPV 452 (547)
Q Consensus 392 ~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~-~~~GTD~~~ 452 (547)
+.++.+++.|+.+.++....... .. .. .....++.+.+.|++ +++|||+-.
T Consensus 169 ~i~~~~~~~~~~lEiNt~~~~~~-------~~--~~-~~~~~l~~~~~~g~~~i~~gSDAH~ 220 (246)
T PRK07329 169 RIFAKMIDNDLAFELNTKSMYLY-------GN--EG-LYRYAIELYKQLGGKLFSIGSDAHK 220 (246)
T ss_pred HHHHHHHHcCCeEEEECcccccC-------CC--Cc-chHHHHHHHHHcCCeEEEecCCCCC
Confidence 34577889999998887533100 00 00 112347888899985 999999743
Done!