Query 008993
Match_columns 547
No_of_seqs 116 out of 1556
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:23:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icj_A Uncharacterized metal-d 100.0 4.7E-60 1.6E-64 499.0 32.4 437 46-530 37-508 (534)
2 3gnh_A L-lysine, L-arginine ca 100.0 9.8E-37 3.3E-41 314.0 27.2 344 45-547 2-402 (403)
3 3h4u_A Amidohydrolase; signatu 100.0 1E-35 3.5E-40 313.4 29.7 377 40-547 24-451 (479)
4 4dzh_A Amidohydrolase; adenosi 100.0 9.3E-36 3.2E-40 312.9 28.6 370 43-547 12-422 (472)
5 3feq_A Putative amidohydrolase 100.0 5E-36 1.7E-40 310.7 25.3 333 44-547 3-410 (423)
6 3ls9_A Triazine hydrolase; atr 100.0 8.3E-36 2.8E-40 312.2 26.6 381 47-547 2-432 (456)
7 3lnp_A Amidohydrolase family p 100.0 2.7E-35 9.2E-40 309.3 30.1 376 37-547 15-440 (468)
8 4dyk_A Amidohydrolase; adenosi 100.0 7E-36 2.4E-40 312.3 24.7 369 43-547 6-415 (451)
9 2r8c_A Putative amidohydrolase 100.0 1.1E-35 3.9E-40 308.3 26.1 342 43-547 2-413 (426)
10 4f0r_A 5-methylthioadenosine/S 100.0 5.2E-35 1.8E-39 305.4 28.6 369 43-547 4-413 (447)
11 2bb0_A Imidazolonepropionase; 100.0 7.3E-34 2.5E-38 294.3 25.2 144 380-547 267-414 (421)
12 2puz_A Imidazolonepropionase; 100.0 1.3E-33 4.3E-38 292.3 26.5 375 43-547 13-419 (419)
13 2paj_A Putative cytosine/guani 100.0 2.2E-33 7.4E-38 296.7 26.8 378 43-547 8-455 (492)
14 2qs8_A XAA-Pro dipeptidase; am 100.0 6.5E-33 2.2E-37 286.9 29.0 341 43-546 5-411 (418)
15 2p9b_A Possible prolidase; pro 100.0 6E-33 2E-37 290.6 28.9 361 41-547 9-432 (458)
16 2q09_A Imidazolonepropionase; 100.0 2.2E-33 7.6E-38 290.2 24.8 371 45-547 5-407 (416)
17 3be7_A Zn-dependent arginine c 100.0 4.8E-32 1.6E-36 279.4 30.9 170 350-547 222-400 (408)
18 4aql_A Guanine deaminase; hydr 100.0 8.8E-32 3E-36 282.2 32.0 184 350-547 259-471 (476)
19 2ood_A BLR3880 protein; PSI-II 100.0 3.6E-32 1.2E-36 285.6 28.2 185 350-547 231-465 (475)
20 2qt3_A N-isopropylammelide iso 100.0 3.6E-32 1.2E-36 279.9 26.7 366 43-547 3-397 (403)
21 4f0l_A Amidohydrolase; ssgcid, 100.0 2E-31 6.8E-36 279.0 30.7 181 350-547 238-435 (458)
22 1ra0_A Cytosine deaminase; alp 100.0 1.1E-32 3.7E-37 286.2 20.5 370 43-547 6-410 (430)
23 2i9u_A Cytosine/guanine deamin 100.0 5.4E-31 1.8E-35 274.2 31.6 374 42-547 6-428 (439)
24 3hpa_A Amidohydrolase; signatu 100.0 1.9E-31 6.4E-36 280.2 28.2 158 371-547 282-451 (479)
25 3ooq_A Amidohydrolase; structu 100.0 1.4E-32 4.8E-37 282.1 19.0 165 350-547 223-387 (396)
26 3v7p_A Amidohydrolase family p 100.0 3.1E-31 1.1E-35 274.4 25.0 147 377-547 249-404 (427)
27 3mdu_A N-formimino-L-glutamate 100.0 3.6E-30 1.2E-34 268.7 29.8 182 350-547 229-430 (453)
28 4ac7_C Urease subunit alpha; h 100.0 5.6E-31 1.9E-35 274.5 19.7 182 350-547 246-459 (570)
29 4ubp_C Protein (urease (chain 100.0 5.6E-31 1.9E-35 274.5 18.8 182 350-547 246-459 (570)
30 3mtw_A L-arginine carboxypepti 100.0 1.5E-29 5.1E-34 256.8 27.3 102 429-545 298-400 (403)
31 1p1m_A Hypothetical protein TM 100.0 1.8E-30 6E-35 267.5 18.6 341 47-546 1-380 (406)
32 1gkr_A Hydantoinase, non-ATP d 100.0 2.5E-29 8.4E-34 263.2 25.7 157 381-547 235-435 (458)
33 1yrr_A N-acetylglucosamine-6-p 100.0 1.1E-29 3.7E-34 259.4 17.1 135 382-547 245-381 (382)
34 3mkv_A Putative amidohydrolase 100.0 1.1E-28 3.7E-33 251.8 24.1 105 429-546 306-412 (426)
35 1xrt_A Dihydroorotase, dhoase; 100.0 3E-30 1E-34 270.5 12.1 166 380-547 272-466 (467)
36 2imr_A Hypothetical protein DR 100.0 1.9E-28 6.5E-33 253.4 25.3 126 373-523 291-418 (420)
37 1e9y_B Urease subunit beta; hy 100.0 1.6E-28 5.6E-33 260.1 24.5 153 379-546 268-457 (569)
38 2vun_A Enamidase; nicotinate d 100.0 3.4E-28 1.2E-32 248.7 26.1 137 382-547 217-371 (386)
39 3e74_A Allantoinase; (beta/alp 100.0 1.3E-27 4.6E-32 249.8 29.7 160 379-547 256-454 (473)
40 2gwn_A Dihydroorotase; zinc-bi 100.0 1.4E-28 4.9E-33 256.6 21.8 157 380-546 237-433 (452)
41 3hm7_A Allantoinase; metallo-d 100.0 3.8E-28 1.3E-32 253.3 24.1 161 379-547 238-438 (448)
42 3sfw_A Dihydropyrimidinase; hy 100.0 2.3E-28 7.9E-33 255.6 22.2 160 380-547 234-439 (461)
43 2z00_A Dihydroorotase; zinc bi 100.0 2.9E-28 9.9E-33 252.6 21.1 159 378-547 226-423 (426)
44 1gkp_A Hydantoinase; hydrolase 100.0 1.9E-27 6.5E-32 248.8 23.1 161 379-547 232-437 (458)
45 2fty_A Dihydropyrimidinase; al 100.0 3.9E-27 1.3E-31 250.7 24.4 66 44-115 2-67 (559)
46 1nfg_A D-hydantoinase; TIM bar 100.0 7E-27 2.4E-31 244.5 23.9 108 431-547 295-436 (457)
47 3gip_A N-acyl-D-glutamate deac 100.0 7.5E-27 2.6E-31 245.0 23.6 68 43-115 5-72 (480)
48 2vm8_A Dihydropyrimidinase-rel 99.9 2.6E-27 8.8E-32 250.6 19.9 114 431-546 325-465 (501)
49 3gri_A Dihydroorotase, dhoase; 99.9 5.6E-27 1.9E-31 242.4 21.6 155 380-547 225-421 (424)
50 3mpg_A Dihydroorotase, dhoase; 99.9 1.6E-26 5.6E-31 239.4 22.5 155 380-547 226-422 (428)
51 2ogj_A Dihydroorotase; TIM bar 99.9 2.1E-26 7.2E-31 237.9 22.7 140 381-547 227-389 (417)
52 3dc8_A Dihydropyrimidinase; TI 99.9 4.4E-26 1.5E-30 238.9 25.2 158 379-547 230-436 (490)
53 2ics_A Adenine deaminase; TIM 99.9 1.8E-25 6.2E-30 227.8 25.7 126 392-547 230-371 (379)
54 1rk6_A D-aminoacylase; TIM bar 99.9 3.5E-26 1.2E-30 241.4 20.5 399 45-547 21-478 (496)
55 4gy7_A Urease; JACK bean, hydr 99.9 4.7E-26 1.6E-30 249.1 21.0 106 433-546 617-728 (840)
56 4ep8_C Urease subunit alpha; a 99.9 1E-25 3.6E-30 241.3 18.5 107 432-546 342-454 (566)
57 3nqb_A Adenine deaminase 2; PS 99.9 4.9E-25 1.7E-29 235.7 23.2 129 382-546 239-372 (608)
58 2vhl_A N-acetylglucosamine-6-p 99.9 4.8E-25 1.7E-29 226.1 21.8 134 382-547 252-389 (396)
59 3iv8_A N-acetylglucosamine-6-p 99.9 2.1E-24 7.1E-29 216.2 23.1 370 47-547 5-381 (381)
60 2ftw_A Dihydropyrimidine amido 99.9 1.2E-24 4.2E-29 230.6 19.7 67 43-115 6-72 (521)
61 2vr2_A Dihydropyrimidinase; hy 99.9 4.4E-24 1.5E-28 227.2 22.3 113 433-547 332-471 (541)
62 1onw_A Isoaspartyl dipeptidase 99.9 5.1E-23 1.7E-27 210.6 24.3 92 432-546 265-376 (390)
63 1o12_A N-acetylglucosamine-6-p 99.8 2.4E-20 8.2E-25 189.2 16.1 70 455-547 305-374 (376)
64 3ggm_A Uncharacterized protein 99.6 3.1E-15 1.1E-19 115.5 9.0 73 44-117 3-75 (81)
65 3pnu_A Dihydroorotase; TIM bar 99.3 4.9E-11 1.7E-15 118.5 18.8 124 379-525 183-332 (359)
66 2z26_A Dihydroorotase, dhoase; 99.1 3.4E-09 1.2E-13 105.7 17.1 116 378-508 170-312 (347)
67 2pgf_A Adenosine deaminase; me 98.8 8.3E-08 2.8E-12 96.2 15.9 228 240-503 108-360 (371)
68 3iar_A Adenosine deaminase; pu 98.6 4.5E-07 1.5E-11 90.0 15.2 231 241-503 72-334 (367)
69 3rys_A Adenosine deaminase 1; 98.6 3.4E-07 1.2E-11 90.1 14.1 230 241-503 75-322 (343)
70 3pao_A Adenosine deaminase; st 98.6 1E-07 3.4E-12 93.3 8.5 230 240-502 71-318 (326)
71 4gxw_A Adenosine deaminase; am 98.0 6.1E-05 2.1E-09 75.0 12.7 234 240-502 89-342 (380)
72 2ob3_A Parathion hydrolase; me 97.8 0.00058 2E-08 67.1 17.2 136 350-500 164-325 (330)
73 2a3l_A AMP deaminase, AMPD; at 97.8 5.2E-06 1.8E-10 88.2 2.6 96 382-503 540-643 (701)
74 1zzm_A Putative deoxyribonucle 97.6 0.0016 5.5E-08 61.4 16.2 118 350-502 130-259 (259)
75 1bf6_A Phosphotriesterase homo 97.6 0.003 1E-07 60.5 18.0 125 350-500 154-291 (291)
76 3rcm_A TATD family hydrolase; 97.6 0.0016 5.5E-08 62.3 15.2 121 350-503 130-266 (287)
77 1xwy_A DNAse TATD, deoxyribonu 97.5 0.0037 1.3E-07 59.0 16.8 120 350-502 128-263 (264)
78 3ovg_A Amidohydrolase; structu 97.4 0.0059 2E-07 60.2 16.9 142 350-517 185-345 (363)
79 2vc7_A Aryldialkylphosphatase; 97.2 0.016 5.3E-07 56.2 17.9 125 350-500 167-314 (314)
80 3lgd_A Adenosine deaminase CEC 97.0 0.0091 3.1E-07 61.3 13.9 232 241-502 194-460 (508)
81 3pnz_A Phosphotriesterase fami 96.8 0.091 3.1E-06 51.1 19.3 223 249-502 48-329 (330)
82 2xio_A Putative deoxyribonucle 96.8 0.027 9.1E-07 54.3 15.1 122 350-508 143-298 (301)
83 3k2g_A Resiniferatoxin-binding 96.7 0.066 2.2E-06 52.9 17.2 134 350-503 206-356 (364)
84 3tn4_A Phosphotriesterase; lac 96.6 0.15 5.3E-06 50.0 19.4 225 243-499 79-358 (360)
85 2gzx_A Putative TATD related D 96.6 0.076 2.6E-06 49.8 16.7 120 350-503 125-257 (265)
86 3gtx_A Organophosphorus hydrol 96.3 0.28 9.7E-06 47.8 18.9 138 350-500 189-339 (339)
87 3gg7_A Uncharacterized metallo 96.0 0.14 4.9E-06 47.6 14.6 117 350-503 120-246 (254)
88 1yix_A Deoxyribonuclease YCFH; 95.9 0.084 2.9E-06 49.5 12.8 120 350-503 127-258 (265)
89 3rhg_A Putative phophotriester 95.5 0.22 7.5E-06 49.1 14.4 138 350-504 196-347 (365)
90 2y1h_A Putative deoxyribonucle 94.2 0.47 1.6E-05 44.5 12.4 116 350-503 142-267 (272)
91 1j6o_A TATD-related deoxyribon 93.0 1.3 4.5E-05 41.4 13.1 119 350-502 136-266 (268)
92 2ffi_A 2-pyrone-4,6-dicarboxyl 89.9 4.7 0.00016 37.8 13.5 58 434-503 219-281 (288)
93 4i6k_A Amidohydrolase family p 89.2 5.9 0.0002 37.4 13.6 58 434-503 231-293 (294)
94 3cjp_A Predicted amidohydrolas 86.4 16 0.00054 33.7 14.6 49 440-503 218-266 (272)
95 1v77_A PH1877P, hypothetical p 83.7 2.4 8.3E-05 38.0 7.0 101 380-501 97-209 (212)
96 3ipw_A Hydrolase TATD family p 80.9 20 0.00068 34.3 12.7 117 350-502 171-323 (325)
97 3irs_A Uncharacterized protein 80.5 29 0.001 32.4 13.8 52 440-506 233-285 (291)
98 3guw_A Uncharacterized protein 80.2 2.1 7.3E-05 39.8 5.5 117 350-503 126-250 (261)
99 3qy7_A Tyrosine-protein phosph 79.0 7.8 0.00027 35.9 8.9 203 250-502 23-235 (262)
100 2qpx_A Predicted metal-depende 72.9 44 0.0015 32.6 13.0 52 241-292 143-195 (376)
101 2dvt_A Thermophilic reversible 72.3 43 0.0015 31.6 12.7 54 434-502 270-325 (327)
102 2f6k_A Metal-dependent hydrola 67.5 50 0.0017 30.7 11.9 57 434-501 249-307 (307)
103 3nur_A Amidohydrolase; TIM bar 51.4 1.7E+02 0.0059 28.0 14.5 50 439-503 305-355 (357)
104 2wje_A CPS4B, tyrosine-protein 50.5 1.4E+02 0.0048 26.8 12.7 66 380-453 135-207 (247)
105 4inf_A Metal-dependent hydrola 45.6 2.2E+02 0.0074 27.5 13.4 47 440-501 326-373 (373)
106 3ij6_A Uncharacterized metal-d 35.0 2.8E+02 0.0096 25.8 14.8 51 440-502 253-306 (312)
107 2yxo_A Histidinol phosphatase; 34.2 2.3E+02 0.0079 25.4 10.1 50 393-451 177-226 (267)
108 4do7_A Amidohydrolase 2; enzym 32.6 3E+02 0.01 25.4 10.8 61 434-503 227-290 (303)
109 4dpp_A DHDPS 2, dihydrodipicol 27.8 3.2E+02 0.011 26.3 9.9 131 247-407 80-217 (360)
110 4e38_A Keto-hydroxyglutarate-a 26.5 3.5E+02 0.012 24.1 11.1 31 380-410 85-115 (232)
111 2dvt_A Thermophilic reversible 25.8 13 0.00046 35.2 -0.2 15 102-116 1-15 (327)
112 4d9a_A 2-pyrone-4,6-dicarbaxyl 23.6 4.4E+02 0.015 24.3 14.6 60 434-506 232-297 (303)
113 4d9a_A 2-pyrone-4,6-dicarbaxyl 22.2 49 0.0017 31.1 3.0 41 100-140 22-66 (303)
No 1
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=100.00 E-value=4.7e-60 Score=499.00 Aligned_cols=437 Identities=30% Similarity=0.447 Sum_probs=377.4
Q ss_pred cEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhh-cCCCeEEeCCCCeeecccccccccccccccccccccc
Q 008993 46 DLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLA-ADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKL 124 (547)
Q Consensus 46 ~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~-~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 124 (547)
+++|+|++|+++++..+..++|+|+||||++||+..+...+. ++.+++||+.|++|+|||||+|+|+..++......++
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 489999999999877666779999999999999987654432 3567999999999999999999999999887778899
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCC
Q 008993 125 RGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNL 204 (547)
Q Consensus 125 ~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~ 204 (547)
.+++|.+++.++++++.+. |+.|+||+++.| ++.|++.+||++ ++|+++.+.++|..++|+++|+.+|+ .+
T Consensus 117 ~~~~s~~e~~~~l~~~~~~-----wi~g~G~~~~~~-~~~pt~~~LD~~--~~Pv~l~~~~~H~~~~Ns~AL~~~gi-~~ 187 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGR-----IIFGFGWDQDEL-GRWPTREDLDVI--DRPVFLYRRCFHVAVMNSKMIDLLNL-KP 187 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSS-----SEEEEEECHHHH-SSCCCHHHHTTS--SSCEEEEETTSSEEEECHHHHHHHCC-CC
T ss_pred CCCCCHHHHHHHHHHHHhh-----CEEEcccCHHHh-cCCCCHHHHhhC--CCeEEEEecCCcHhHHhHHHHHHcCC-CC
Confidence 9999999999999987764 999999999999 899999999999 99999999999999999999999999 66
Q ss_pred CCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCC-C-CHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhH
Q 008993 205 SEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPE-V-SVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (547)
Q Consensus 205 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 282 (547)
++.+. |+ +|.+.|.++..+...++. . +.++..+.++.+++.+.+.|+|++.+++.. ..
T Consensus 188 t~~p~---------G~-tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~----------~~ 247 (534)
T 3icj_A 188 SKDFD---------ES-TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVG----------EK 247 (534)
T ss_dssp CTTEE---------TT-TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC----------HH
T ss_pred CCCCC---------CC-CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCC----------HH
Confidence 65543 67 899999998888877776 6 889999999999999999999999998632 46
Q ss_pred HHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhc-------------
Q 008993 283 FADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHE------------- 349 (547)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------------- 349 (547)
..+.++++.+++.+++|++.+...+..+...+... .....++++.+++|++.||++...++.+.+
T Consensus 248 ~~~~~~~l~~~g~l~~rv~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~ 325 (534)
T 3icj_A 248 ALKALFELEREGRLKMNVFAYLSPELLDKLEELNL--GKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELV 325 (534)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEECGGGHHHHHHHTC--CSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCS
T ss_pred HHHHHHHHHhCCCCcEEEEEecCHHHHHHHHHhcc--ccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCccc
Confidence 67899999999999999998765544433333211 224568899999999999999887765432
Q ss_pred -------------------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCcc
Q 008993 350 -------------------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQH 410 (547)
Q Consensus 350 -------------------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~ 410 (547)
+.+|+.++.+++.+++++++.. .+..++|+.+++++++++|++.|+.+++||.+
T Consensus 326 ~~~e~l~~~v~~A~~~G~~v~~Ha~gd~ai~~~l~a~~~~~-------~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~ 398 (534)
T 3icj_A 326 MNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAE-------FSGRIEHASLVRDDQLERIKELKVRISAQPHF 398 (534)
T ss_dssp SCHHHHHHHHHHHTTTTCEEEEEECSHHHHHHHHHHHHHHT-------CCCEEEECCBCCHHHHHHHHHHTCEEEECTTH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEcChHHHHHHHHHHHhcc-------CCCEEEECCCCCHHHHHHHHHcCCeEEEcccc
Confidence 9999999999999999998763 58899999999999999999999999999998
Q ss_pred ccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHH
Q 008993 411 LLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIA 490 (547)
Q Consensus 411 ~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 490 (547)
...+. .+..++|+++. ...+|++.++++ +++++|||+|..+.+|+.+++.++.| ..+..++++|+++||++
T Consensus 399 ~~~~~-~~~~~lg~~r~-~~~~p~~~l~~~-v~valGSD~p~~~~~p~~~~~~av~r------~~~~~~~~ls~~eaL~~ 469 (534)
T 3icj_A 399 IVSDW-WIVNRVGEERA-KWAYRLKTLSSI-TKLGFSTDSPIEPADPWVSIDAAVNR------YVVDPGERVSREEALHL 469 (534)
T ss_dssp HHHCT-THHHHHHHHHG-GGBTCHHHHHHH-SCEEECCTTTTSCCCHHHHHHHHHHC------CSSCGGGCCCHHHHHHH
T ss_pred ccchh-HHHHhhCHHHH-hccHHHHHHHHh-CCEEeecCCCCCCCCHHHHHHHHHhc------cccCcccCCCHHHHHHH
Confidence 76555 56678888888 888899999999 99999999999889999999999987 22557789999999999
Q ss_pred HHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhh
Q 008993 491 HTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAE 530 (547)
Q Consensus 491 aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~ 530 (547)
+|.|+|+.+|++ ++|+|+|||.|||+|+|.||++++..+
T Consensus 470 ~T~~~A~~lg~e-~~GsLe~Gk~ADlvvld~dpl~~~~~~ 508 (534)
T 3icj_A 470 YTHGSAQVTLAE-DLGKLERGFRAEYIILDRDPLKEMKGI 508 (534)
T ss_dssp TTHHHHHHTTCT-TCSCCSTTSBCCEEEESSCTTC-----
T ss_pred HHHHHHHHhCCC-CCeEECCCCCcCEEEECCChhhccccc
Confidence 999999999999 899999999999999999999865543
No 2
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=100.00 E-value=9.8e-37 Score=313.99 Aligned_cols=344 Identities=18% Similarity=0.123 Sum_probs=229.1
Q ss_pred ccEEEEcCEEEeCCCCCc-eeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccc
Q 008993 45 ADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~~~-~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~ 123 (547)
.+++|+|++|+|+.+..+ .+++|+|+||||++|++... .. +.++++||++|++|+|||||+|+|+......
T Consensus 2 ~~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~--~~~~~viD~~G~~v~PGlID~H~H~~~~~~~----- 73 (403)
T 3gnh_A 2 EIKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGD-AV--PAGATAVDLPGVTLLPGLIDMHVHLDSLAEV----- 73 (403)
T ss_dssp CEEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTS-CC--CTTCEEEEEEEEEEEECEEEEEECTTCCTTC-----
T ss_pred ccEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCC-CC--CCCCeEEECCCCEEcCCeEeeeEccccCccc-----
Confidence 368999999999986544 67799999999999998653 11 4678999999999999999999998633110
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 008993 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (547)
Q Consensus 124 ~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~ 203 (547)
.+++.
T Consensus 74 --------------------------------------------~~~~~------------------------------- 78 (403)
T 3gnh_A 74 --------------------------------------------GGYNS------------------------------- 78 (403)
T ss_dssp --------------------------------------------CSGGG-------------------------------
T ss_pred --------------------------------------------chhhh-------------------------------
Confidence 00000
Q ss_pred CCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHH
Q 008993 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (547)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 283 (547)
...+++..........+.+.+.|+|++.+++... ..
T Consensus 79 ----------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~----------~~ 114 (403)
T 3gnh_A 79 ----------------------------------LEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAAD----------YD 114 (403)
T ss_dssp ----------------------------------GGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCST----------TH
T ss_pred ----------------------------------hcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCCc----------cc
Confidence 0122334444555567888899999999986421 11
Q ss_pred HHHHHHHhhCCC-CeeEEEEccC-------------------------ccchhhHHHHHHhcCCCCCCcEEEceEEEEEc
Q 008993 284 ADVYQWASYSEK-MKIRVCLFFP-------------------------LETWSSLADLINKTGHVLSDWVYLGGVKAFAD 337 (547)
Q Consensus 284 ~~~~~~~~~~~~-~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 337 (547)
...++...+.+. ...+++.... ....++..+.+++..... ...+|++.+
T Consensus 115 ~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~ 189 (403)
T 3gnh_A 115 DVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKYG-----AQVIKICAT 189 (403)
T ss_dssp HHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHTT-----CSEEEEECB
T ss_pred cHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCCcccCCHHHHHHHHHHHHHcC-----CCEEEEeec
Confidence 122333333332 2334433211 112233344443322211 235677777
Q ss_pred CCcCcchhh----------hhc-----------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHH
Q 008993 338 GSLGSNSAL----------FHE-----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAAR 396 (547)
Q Consensus 338 ~~~~~~~~~----------~~~-----------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~ 396 (547)
|.+...... +.. +.+|+.+..+++.++++ + ...++|+.+++++++++
T Consensus 190 G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g----~~~i~H~~~~~~~~~~~ 257 (403)
T 3gnh_A 190 GGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREAVRA--------G----VDTIEHASLVDDEGIKL 257 (403)
T ss_dssp CCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT--------T----CSEEEECTTCCHHHHHH
T ss_pred CCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--------C----CCEEecCCcCCHHHHHH
Confidence 654322111 111 88998877766655542 2 45899999999999999
Q ss_pred HHhCCcEEEecCccccCChhHHH------HhhChh--hhhhhchHHHHHHHCCCeeeecCCCCCCCCC-hHHHHHHHHcc
Q 008993 397 FGDQGIVASMQPQHLLDDADSAR------KKLGVD--RAERESYLFQSLLANNALLALGSDWPVADIN-PLCAIRTAMKR 467 (547)
Q Consensus 397 ~~~~g~~~~~~p~~~~~~~~~~~------~~~g~~--~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~-~~~~~~~~~~~ 467 (547)
+++.|+.+..+|........... ..+... .......+++.++++|+++++|||++.++.. .+.++...
T Consensus 258 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~~~~e~~~~--- 334 (403)
T 3gnh_A 258 AVQKGAYFSMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIYPHGDNAKQFAVM--- 334 (403)
T ss_dssp HHHHTCEEECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTBCTTCGGGHHHHH---
T ss_pred HHHCCCEEEeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCCchHHHHHHH---
Confidence 99999999888754321110000 000000 0112335789999999999999999765432 34444432
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 468 IPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 468 ~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
.+.++|++++|+++|.|||+++|+++++|+|+|||.|||||+|.||++++..+. +|..||++|++|+.
T Consensus 335 ----------~~~gl~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~~~~--~v~~v~~~G~~v~~ 402 (403)
T 3gnh_A 335 ----------VRYGATPLQAIQSATLTAAEALGRSKDVGQVAVGRYGDMIAVAGDPLADVTTLE--KPVFVMKGGAVVKA 402 (403)
T ss_dssp ----------HHTTCCHHHHHHHTTHHHHHHHTCTTTSSSCCTTSBCCEEEESSCTTTCGGGGG--SCSEEEETTEEEEC
T ss_pred ----------HHcCCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHHHhc--CcCEEEECCEEEeC
Confidence 234799999999999999999999998999999999999999999999887776 89999999999874
No 3
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=100.00 E-value=1e-35 Score=313.44 Aligned_cols=377 Identities=19% Similarity=0.209 Sum_probs=237.8
Q ss_pred ecCCcccEEEEcCEEE---eCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccc
Q 008993 40 TTNLEADLVVTNGVIF---TGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGG 116 (547)
Q Consensus 40 ~~~~~~~~li~n~~v~---~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 116 (547)
+.++|++++|+|++++ |+......+++|+|+||||++||+..... ++.+++||++|++|+|||||+|+|+....
T Consensus 24 ~~~~m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~---~~~~~viD~~g~~v~PGlID~H~Hl~~~~ 100 (479)
T 3h4u_A 24 SSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP---ETADEVLDLRGHLVIPGLVNTHHHMYQSL 100 (479)
T ss_dssp -----CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC---SCCSEEEECTTEEEEECEEECCCCGGGGG
T ss_pred ccchhhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccC---CCCCeEEeCCCCEEecceeecccccchhh
Confidence 3446789999999976 33344457889999999999999876532 25779999999999999999999997553
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHH
Q 008993 117 LQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVAL 196 (547)
Q Consensus 117 ~~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l 196 (547)
...... ....+.. .++.
T Consensus 101 ~rg~~~--~~~~~l~------------------------------------~~l~------------------------- 117 (479)
T 3h4u_A 101 TRAVPA--AQNAELF------------------------------------GWLT------------------------- 117 (479)
T ss_dssp SCSCTT--TTTCCHH------------------------------------HHHH-------------------------
T ss_pred hccccc--cCCCCHH------------------------------------HHHH-------------------------
Confidence 200000 0000011 1110
Q ss_pred HHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCccc
Q 008993 197 QLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESV 276 (547)
Q Consensus 197 ~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 276 (547)
.+....+..++++.......+...+.+.|+|++.+++...+...
T Consensus 118 -----------------------------------~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~- 161 (479)
T 3h4u_A 118 -----------------------------------NLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGS- 161 (479)
T ss_dssp -----------------------------------HHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTC-
T ss_pred -----------------------------------HhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcc-
Confidence 01111234677788888888899999999999999854332211
Q ss_pred ccchhHHHHHHHHHhhCCCCeeEEEEc-cCc-----------------cchhhHHHHHHhcCCCC-CCcEEEceEEEEEc
Q 008993 277 QLSWEDFADVYQWASYSEKMKIRVCLF-FPL-----------------ETWSSLADLINKTGHVL-SDWVYLGGVKAFAD 337 (547)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d 337 (547)
.. ...++...+.+ +....... ... +...+..+.+....... ...+... +.-
T Consensus 162 --~~---~~~~~~~~~~g-~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~ 231 (479)
T 3h4u_A 162 --RL---DDSIGAAQRIG-MRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVV----VAP 231 (479)
T ss_dssp --CH---HHHHHHHHHHT-CEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEE----EEE
T ss_pred --hH---HHHHHHHHHcC-CEEEEEeeecccccccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEE----Eec
Confidence 12 22333333222 22221111 000 01122223332222110 1122211 111
Q ss_pred CCcCcchh-hhhc-----------eeEEecccH-HHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhC
Q 008993 338 GSLGSNSA-LFHE-----------VAIHAIGDR-ANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQ 400 (547)
Q Consensus 338 ~~~~~~~~-~~~~-----------v~~H~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~ 400 (547)
......+. .+.. +++|+.+.. .++.+++.+. +.+...+..+.+..++|+.++++++++++++.
T Consensus 232 ~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~ 311 (479)
T 3h4u_A 232 CSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFART 311 (479)
T ss_dssp SCTTSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHc
Confidence 11111111 1111 888986544 5555555432 34556678888999999999999999999999
Q ss_pred CcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCC
Q 008993 401 GIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIP 478 (547)
Q Consensus 401 g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (547)
|+.+.+||.++. .++ ...+|++.+.++|+++++|||++.+ +.+++.+++.++...... ..
T Consensus 312 g~~v~~~p~s~~--------~l~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 373 (479)
T 3h4u_A 312 GTGVAHCPCSNM--------RLA-----SGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVG-----FG 373 (479)
T ss_dssp TCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHH-----HC
T ss_pred CCeEEEChhHhh--------hcC-----CCCCCHHHHHHCCCeEEEeCCCCccCCCcCHHHHHHHHHHHhccc-----CC
Confidence 999999998543 222 4566899999999999999998875 478999998776543210 01
Q ss_pred CCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCCh-------hhhc---CCeEEEEEECcEEeCC
Q 008993 479 SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF-------AAEV---SASIEATYVSGVQAYP 547 (547)
Q Consensus 479 ~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~-------~~~~---~~~v~~v~v~G~~v~~ 547 (547)
...++++++|+++|.|||+++|+++ +|+|+|||.|||||+|.+++... ..+. ..+|..||++|++||+
T Consensus 374 ~~~l~~~~al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 451 (479)
T 3h4u_A 374 PDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAGALHDPVAALVFCAPSQTAYTVVNGKVVVR 451 (479)
T ss_dssp TTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTTCTTSHHHHHHHSSCCCCSEEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCccCCcccCHHHHHHccCCCCcCEEEECCEEEEE
Confidence 3348999999999999999999998 99999999999999998875421 1221 4589999999999973
No 4
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.3e-36 Score=312.92 Aligned_cols=370 Identities=19% Similarity=0.210 Sum_probs=238.9
Q ss_pred CcccEEEEcCEEEeCCC--CCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~--~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~ 120 (547)
..++++|+|++|+++++ ...++++|+|+||||++||+..+.... .+++++||++|++|+|||||+|+|+......
T Consensus 12 ~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~-~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~-- 88 (472)
T 4dzh_A 12 EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVR-FAPARTVSRPDAALMPGLVNAHTHNPMTLLR-- 88 (472)
T ss_dssp EEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHH-EEEEEEEEEEEEEEEECEEEEEECGGGGGGT--
T ss_pred CcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhc-CCCCeEEeCCCcEEEECccccccChhhHHhc--
Confidence 34689999999998753 345788999999999999997665321 2467899999999999999999999765320
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 008993 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (547)
Q Consensus 121 ~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g 200 (547)
|... ..+...++...
T Consensus 89 -----g~~~---------------------------------~~~l~~~l~~~--------------------------- 103 (472)
T 4dzh_A 89 -----GVAD---------------------------------DLPLMVWLQQH--------------------------- 103 (472)
T ss_dssp -----TSSC---------------------------------SCCHHHHHHHT---------------------------
T ss_pred -----cccC---------------------------------CCCHHHHHHHh---------------------------
Confidence 0000 00001111110
Q ss_pred CCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccch
Q 008993 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (547)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 280 (547)
+.... ....++++.......++..+.+.|+|++.++... .
T Consensus 104 -----------------------------~~~~~--~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~ 143 (472)
T 4dzh_A 104 -----------------------------IWPVE--AAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFF---------A 143 (472)
T ss_dssp -----------------------------HHHHH--HHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC---------H
T ss_pred -----------------------------hhhhh--hccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC---------H
Confidence 00000 0124556777778888888999999999887521 1
Q ss_pred hHHHHHHHHHhhCCCCeeEEEEcc---Cc---cch----hhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc
Q 008993 281 EDFADVYQWASYSEKMKIRVCLFF---PL---ETW----SSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE 349 (547)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~ 349 (547)
+ ...+.+.+.+ +...+.... +. ... .+..+....... ...+... +........+. .+..
T Consensus 144 ~---~~~~a~~~~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~----~~~~~~~~~~~~~l~~ 213 (472)
T 4dzh_A 144 D---VQAAVYKQHG-FRALVGAVIIDFPTAWASSDDEYFARAGELHDQWRD--DPLISTA----FAPHAPYTVNDANFER 213 (472)
T ss_dssp H---HHHHHHHHTT-CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHTT--CSSEEEE----EEECCTTTSCHHHHHH
T ss_pred H---HHHHHHHHhC-CeEEEEecccCCCcccccCHHHHHHHHHHHHHHhCC--CCceEEE----EecCCCCCCCHHHHHH
Confidence 1 2233333332 222222211 11 111 122222222111 1222221 12222211111 1111
Q ss_pred -----------eeEEecc-cHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccC
Q 008993 350 -----------VAIHAIG-DRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLD 413 (547)
Q Consensus 350 -----------v~~H~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~ 413 (547)
+++|+.+ ...+..+++.+. +.+...+..+.+..++|+.++++++++++++.|+.+.+||.++.
T Consensus 214 ~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~- 292 (472)
T 4dzh_A 214 VRMLADQLDMPVHLHTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNL- 292 (472)
T ss_dssp HHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHH-
T ss_pred HHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHH-
Confidence 8888863 333444444321 23445577788999999999999999999999999999998543
Q ss_pred ChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 414 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 414 ~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
.++ .+.+|++.+.++|+++++|||++.+ +.+++.+++.+...... ......++|++++|+++
T Consensus 293 -------~~~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~~l~~~~al~~~ 356 (472)
T 4dzh_A 293 -------KLA-----SGFCPACALQRASVNLAIGTDGCASNNDLDMFSENRTAAILAKA----VANDATALDAATTLRAA 356 (472)
T ss_dssp -------HTT-----CCCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHHHH----HHTCTTSSCHHHHHHHH
T ss_pred -------hcC-----CCCccHHHHHHCCCCEEEECCCCcCCCCCCHHHHHHHHHHHhhh----hcCCCCcCCHHHHHHHH
Confidence 222 4556899999999999999998865 57899998876643210 01235689999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCC------Chhhh----cCCeEEEEEECcEEeCC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWE------DFAAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~------~~~~~----~~~~v~~v~v~G~~v~~ 547 (547)
|.|||+++|+++++|+|+|||.|||||+|.+++. +...+ ...+|..||++|++||+
T Consensus 357 T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~l~~~~~~~~V~~v~v~G~~v~~ 422 (472)
T 4dzh_A 357 TLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPLHHVLSQLIYAAGRHQVTDVWIAGKPKLV 422 (472)
T ss_dssp THHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHTCCGGGEEEEEETTEEEEE
T ss_pred HHHHHHHcCCCCCCcccCCCCcCCEEEEcCCCCccCCccCHHHHHhhcCCCCCceEEEECCEEEEE
Confidence 9999999999998999999999999999998754 22333 25689999999999873
No 5
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=100.00 E-value=5e-36 Score=310.73 Aligned_cols=333 Identities=20% Similarity=0.214 Sum_probs=220.3
Q ss_pred cccEEEEcCEEEeCCCCCc-eeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~~~-~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
|.+++|+|++|+|+.+..+ .+++|+|+||||++|++.... +.++++||++|++|+|||||+|+|+.......
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~----~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~--- 75 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVD----LPNAQAIDVRGKTVMPGFIDCHVHVLASNANL--- 75 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSSCH---
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCC----CCCCeEEeCCCCEECCCeeeeEeeecccCCCh---
Confidence 5688999999999976533 567999999999999985321 46789999999999999999999996442100
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~ 202 (547)
...
T Consensus 76 ---------------------------------------------~~~-------------------------------- 78 (423)
T 3feq_A 76 ---------------------------------------------GVN-------------------------------- 78 (423)
T ss_dssp ---------------------------------------------HHH--------------------------------
T ss_pred ---------------------------------------------hhh--------------------------------
Confidence 000
Q ss_pred CCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhH
Q 008993 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (547)
Q Consensus 203 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 282 (547)
...+.+..........+.+.+.|+|++.+++... .
T Consensus 79 -----------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~---------~- 113 (423)
T 3feq_A 79 -----------------------------------ATQPNILAAIRSLPILDAMLSRGFTSVRDAGGAD---------W- 113 (423)
T ss_dssp -----------------------------------HHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCC---------H-
T ss_pred -----------------------------------hcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCch---------H-
Confidence 0112233344456667888889999998876321 1
Q ss_pred HHHHHHHHhhCCCCeeEEEEcc---------------------------------CccchhhHHHHHHhcCCCCCCcEEE
Q 008993 283 FADVYQWASYSEKMKIRVCLFF---------------------------------PLETWSSLADLINKTGHVLSDWVYL 329 (547)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (547)
.+.+.+........+++... ..+..++..+.+++..... .
T Consensus 114 --~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g-----~ 186 (423)
T 3feq_A 114 --SLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKG-----A 186 (423)
T ss_dssp --HHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTT-----C
T ss_pred --HHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcC-----C
Confidence 22222222212223332210 0122333333333221111 1
Q ss_pred ceEEEEEcCCcCcch---------h-hhhc-----------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCC
Q 008993 330 GGVKAFADGSLGSNS---------A-LFHE-----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH 388 (547)
Q Consensus 330 ~~~~~~~d~~~~~~~---------~-~~~~-----------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~ 388 (547)
..+|.+.+|.+.... . .+.. +.+|+.+..++..++++ + ...++|+.+
T Consensus 187 ~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~l~~--------g----~~~i~H~~~ 254 (423)
T 3feq_A 187 TQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIARAVRC--------G----VRTIEHGNL 254 (423)
T ss_dssp SSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHHHHHH--------T----CCEEEEEEE
T ss_pred CEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHc--------C----CCEEeccCc
Confidence 246777766543211 0 1111 88998877666555542 1 458999999
Q ss_pred CChhHHHHHHhCCcEEEec-----------------CccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCC
Q 008993 389 LASGTAARFGDQGIVASMQ-----------------PQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 451 (547)
Q Consensus 389 ~~~~~l~~~~~~g~~~~~~-----------------p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~ 451 (547)
+++++++++++.|+.+..+ |.++. +++..+. ....+++.+.++|+++++|||++
T Consensus 255 ~~~~~~~~l~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~-~~~~~~~~l~~~Gv~v~~gTD~~ 325 (423)
T 3feq_A 255 VDEAAAKLMHEHGAFVVPTLVTYDALAKHGAEFGMPPESVA--------KVASVQQ-KGRESLEIYANAGVKMGFGSDLL 325 (423)
T ss_dssp CCHHHHHHHHHHTCEEECCTHHHHHHHHHTGGGTCCTTTSS--------THHHHHH-HHHHHHHHHHHHTCCBCCCCCCC
T ss_pred CCHHHHHHHHHCCCccccchHHHHHHHhcccccCCCHHHHH--------HHHHHHH-HHHHHHHHHHHCCCEEEECCCCC
Confidence 9999999999999987432 22111 1122222 45678999999999999999986
Q ss_pred CCC-CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhh
Q 008993 452 VAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAE 530 (547)
Q Consensus 452 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~ 530 (547)
... .+...++... .+ .+|++++|+++|.|||+++|+++++|+|++||.|||||+|.||++++..+
T Consensus 326 ~~~~~~~~~e~~~~-------------~~-~ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~p~~~~~~~ 391 (423)
T 3feq_A 326 GEMHAFQSGEFRIR-------------AE-VLGNLEALRSATTVAAEIVNMQGQLGVIAVGAIADLVVLDGNPLEDIGVV 391 (423)
T ss_dssp GGGGGGTTHHHHHH-------------HT-TSCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBCCEEEESSCTTTCGGGT
T ss_pred CCCCcchHHHHHHH-------------Hh-hCCHHHHHHHHHHHHHHHhCCCCCceeECCCCcCCEEEECCChhhCHHHH
Confidence 432 2233444332 12 28999999999999999999999899999999999999999999977665
Q ss_pred cC--CeEEEEEECcEEeCC
Q 008993 531 VS--ASIEATYVSGVQAYP 547 (547)
Q Consensus 531 ~~--~~v~~v~v~G~~v~~ 547 (547)
.. .+|..||++|++||+
T Consensus 392 ~~~~~~v~~v~~~G~~v~~ 410 (423)
T 3feq_A 392 ADEGARVEYVLQRGTLVKR 410 (423)
T ss_dssp SSSTTSEEEEEETTEEEEE
T ss_pred hccCCCceEEEECCEEEeC
Confidence 32 589999999999873
No 6
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=100.00 E-value=8.3e-36 Score=312.18 Aligned_cols=381 Identities=19% Similarity=0.209 Sum_probs=241.7
Q ss_pred EEEEcC-EEEeCCC--CCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccc
Q 008993 47 LVVTNG-VIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVK 123 (547)
Q Consensus 47 ~li~n~-~v~~~~~--~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~ 123 (547)
++|+|+ .|+++++ ....+++|+|+||||++||+.... +++.++||++|++|+|||||+|+|+......... .
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~-~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSD----RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIP-Q 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCC----TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCG-G
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCC----CCCCeEEeCCCCEEecCeeecccccchhhhcccc-c
Confidence 689999 6776654 344788999999999999987321 3577999999999999999999999755321000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCC
Q 008993 124 LRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITN 203 (547)
Q Consensus 124 ~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~ 203 (547)
.. -.+.. .+++... ..
T Consensus 77 ~~-~~~l~------------------------------------~~l~~~~------------------~~--------- 92 (456)
T 3ls9_A 77 LE-RVTMA------------------------------------SWLEGVL------------------TR--------- 92 (456)
T ss_dssp GS-SCCHH------------------------------------HHHHHHH------------------HH---------
T ss_pred CC-CCCHH------------------------------------HHHHHhc------------------cc---------
Confidence 00 00011 1111100 00
Q ss_pred CCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHH
Q 008993 204 LSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDF 283 (547)
Q Consensus 204 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 283 (547)
...+.. ....++++.+.....+...+.+.|+|++.++....+...... ..
T Consensus 93 --------------------------~~~~~~-~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~---~~ 142 (456)
T 3ls9_A 93 --------------------------SAGWWR-DGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADS---YI 142 (456)
T ss_dssp --------------------------HHHHHH-TTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCT---HH
T ss_pred --------------------------cccccc-cccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccch---hH
Confidence 000000 014677888888888999999999999999854333221111 12
Q ss_pred HHHHHHHhhCCCCeeEEEEcc-Cc-------------cch----hhHHHHHHhcCC-CCCCcEEEceEEEEEcCCcCcch
Q 008993 284 ADVYQWASYSEKMKIRVCLFF-PL-------------ETW----SSLADLINKTGH-VLSDWVYLGGVKAFADGSLGSNS 344 (547)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~ 344 (547)
....+...+. ++...+.... .. ... .+..+++..... .....+.. .+.-......+
T Consensus 143 ~~~~~a~~~~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 217 (456)
T 3ls9_A 143 DATIEAATDL-GIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRI----ALGPCGVPYDK 217 (456)
T ss_dssp HHHHHHHHHH-TCEEEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEE----EECCCCTTTSC
T ss_pred HHHHHHHHHc-CCEEEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEE----EEecCCCCCCC
Confidence 2223333322 2232222211 00 111 222233322211 00111111 11111111111
Q ss_pred h-hhhc-----------eeEEecccHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecC
Q 008993 345 A-LFHE-----------VAIHAIGDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQP 408 (547)
Q Consensus 345 ~-~~~~-----------v~~H~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p 408 (547)
. .+.. +++|+.+....+.+++.+. +.+...+..+.+..++|+.++++++++++++.|+.+.+||
T Consensus 218 ~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p 297 (456)
T 3ls9_A 218 PELFEAFAQMAADYDVRLHTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLI 297 (456)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECH
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECh
Confidence 1 1111 8889875554455555442 3455677788899999999999999999999999999999
Q ss_pred ccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHH
Q 008993 409 QHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTD 486 (547)
Q Consensus 409 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 486 (547)
.++. +++ ...+|++.+.++|+++++|||++.+ ..+++.+++.++.+..... ....++++++++
T Consensus 298 ~s~~--------~l~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 362 (456)
T 3ls9_A 298 APDL--------RMG-----WGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPAD--PNEPEKWLSARE 362 (456)
T ss_dssp HHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHTGGGS--TTCGGGSCCHHH
T ss_pred hHHh--------hcC-----CCcchHHHHHHCCCcEEEECCCCccCCCCCHHHHHHHHHHHhcccc--ccccccCCCHHH
Confidence 8543 222 4567899999999999999999865 4689999998876543211 112334899999
Q ss_pred HHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCCh------hhh----cCCeEEEEEECcEEeCC
Q 008993 487 ALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF------AAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 487 al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~------~~~----~~~~v~~v~v~G~~v~~ 547 (547)
+|+++|.|||+++|+++ +|+|++||.|||||+|.+++... ..+ ...+|..||++|++||+
T Consensus 363 al~~~T~~~A~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 432 (456)
T 3ls9_A 363 LLRMATRGSAECLGRPD-LGVLEEGRAADIACWRLDGVDRVGVHDPAIGLIMTGLSDRASLVVVNGQVLVE 432 (456)
T ss_dssp HHHHTTHHHHHHTTCTT-SSCCSTTSBCCEEEEESCSGGGTTBSSHHHHHHHCCSBCCCSEEEETTEEEEE
T ss_pred HHHHHHHHHHHHhCCCC-CCccCCCCccCEEEEeCCCCccCCCCChHHHhhccCCCCCeeEEEECCEEEEE
Confidence 99999999999999998 99999999999999999976521 111 13579999999999873
No 7
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=100.00 E-value=2.7e-35 Score=309.33 Aligned_cols=376 Identities=22% Similarity=0.263 Sum_probs=239.8
Q ss_pred eeeecCCcccEEEEcCEEEeCCCCC--------ceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccc
Q 008993 37 TTTTTNLEADLVVTNGVIFTGDDSL--------LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDS 108 (547)
Q Consensus 37 ~~~~~~~~~~~li~n~~v~~~~~~~--------~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~ 108 (547)
....+..+++++|+|++|+++++.. .++++|+|+||||++||+... .. ++++++||++|++|+|||||+
T Consensus 15 ~~~~~~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~-~~--~~~~~viD~~g~~v~PGlID~ 91 (468)
T 3lnp_A 15 RQSQPKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSS-CQ--IPATETLDLGQQVLMPGWVNA 91 (468)
T ss_dssp ------CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTT-CC--CCEEEEEECCSEEEEECEEEC
T ss_pred ccCCCCccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCcc-cc--CCCCeEEeCCCcEEEeCeech
Confidence 3344455678999999999986543 468899999999999998654 11 356789999999999999999
Q ss_pred ccccccccccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCch
Q 008993 109 HVHFIPGGLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHM 188 (547)
Q Consensus 109 H~H~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~ 188 (547)
|+|+..... .|... ..+...++...
T Consensus 92 H~H~~~~~~-------~g~~~---------------------------------~~~l~~wl~~~--------------- 116 (468)
T 3lnp_A 92 HGHAAMSLF-------RGLAD---------------------------------DLPLMTWLQEH--------------- 116 (468)
T ss_dssp SCCGGGGGG-------TTSSC---------------------------------SCCHHHHHHHT---------------
T ss_pred hhChhhhhh-------ccCcC---------------------------------CCCHHHHHHHh---------------
Confidence 999964421 00000 00111111110
Q ss_pred hhhcHHHHHHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCc
Q 008993 189 GLANSVALQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFG 268 (547)
Q Consensus 189 ~~~~~~~l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 268 (547)
+.... ....+.++...........+.+.|+|++.++.
T Consensus 117 -----------------------------------------~~~~~--~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~ 153 (468)
T 3lnp_A 117 -----------------------------------------VWPAE--AQHVDEHFVKQGTELAIAEMIQSGTTTFADMY 153 (468)
T ss_dssp -----------------------------------------HHHHH--HHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC
T ss_pred -----------------------------------------hhhhh--hccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc
Confidence 00000 01245567777888889999999999999874
Q ss_pred cCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEcc---Cc---cch----hhHHHHHHhcCCCC---CCcEEEceEEEE
Q 008993 269 RYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF---PL---ETW----SSLADLINKTGHVL---SDWVYLGGVKAF 335 (547)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~ 335 (547)
.. .+. ..+.+.+.+ +...+.... +. ... ....++........ ...+... +
T Consensus 154 ~~---------~~~---~~~~~~~~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~----~ 216 (468)
T 3lnp_A 154 FY---------PQQ---SGEAALAAG-IRAVCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIG----F 216 (468)
T ss_dssp SC---------HHH---HHHHHHHHT-CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEE----E
T ss_pred cC---------HHH---HHHHHHHcC-CeEEEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEE----E
Confidence 21 112 222222222 222222211 11 111 22222222211110 1122221 2
Q ss_pred EcCCcCcchh-hhhc-----------eeEEeccc-HHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHH
Q 008993 336 ADGSLGSNSA-LFHE-----------VAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFG 398 (547)
Q Consensus 336 ~d~~~~~~~~-~~~~-----------v~~H~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~ 398 (547)
........+. .+.. +++|+.+. ..+..+++.+ -+.+...+..+.+..++|+.+++++++++++
T Consensus 217 ~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~ 296 (468)
T 3lnp_A 217 GPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCVHMTQVDDGDIKILQ 296 (468)
T ss_dssp EECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCSCCHHHHHHHH
T ss_pred EcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHH
Confidence 2222221111 1111 88898754 4455544433 1344556778889999999999999999999
Q ss_pred hCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCC
Q 008993 399 DQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAW 476 (547)
Q Consensus 399 ~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 476 (547)
+.|+.+.+||.++. .++ ...++++.+.++|+++++|||++.+ ..+++.+++.+...... ..
T Consensus 297 ~~g~~v~~~p~s~~--------~~~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~----~~ 359 (468)
T 3lnp_A 297 KTGASIIHCPESNL--------KLA-----SGFCPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAALLAKG----VS 359 (468)
T ss_dssp HHCCEEEECHHHHH--------HTT-----CCCCCHHHHHHTTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHH----HH
T ss_pred hcCCEEEEChhhhh--------hcC-----CCCCCHHHHHHCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhhh----cc
Confidence 99999999998543 222 4556899999999999999999875 46899999876632210 00
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--C----hhhh----cCCeEEEEEECcEEeC
Q 008993 477 IPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE----VSASIEATYVSGVQAY 546 (547)
Q Consensus 477 ~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~----~~~~----~~~~v~~v~v~G~~v~ 546 (547)
....+++++++|+++|.|||+++|+++++|+|++||.|||||||.+++. + ...+ ...+|..||++|++||
T Consensus 360 ~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 439 (468)
T 3lnp_A 360 QDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVSHMVYCTKSTQVSHVWVNGRCLL 439 (468)
T ss_dssp TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHSCCGGGEEEEEETTEEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCccCCccCHHHHhhccCCCCCceEEEECCEEEE
Confidence 1356899999999999999999999998999999999999999999754 1 1122 2468999999999997
Q ss_pred C
Q 008993 547 P 547 (547)
Q Consensus 547 ~ 547 (547)
+
T Consensus 440 ~ 440 (468)
T 3lnp_A 440 K 440 (468)
T ss_dssp E
T ss_pred E
Confidence 3
No 8
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7e-36 Score=312.31 Aligned_cols=369 Identities=21% Similarity=0.255 Sum_probs=237.5
Q ss_pred CcccEEEEcCEEEeCC--CCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGD--DSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~--~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~ 120 (547)
.+++++|+|++|++++ .....+++|+|+||||++||+..+... ++++++||++|++|+|||||+|+|+.....
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~--- 80 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMR--HGATEIRELPGMLLAPGLVNAHGHSAMSLF--- 80 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTT--TCEEEEEEEEEEEEEECEEECCCCGGGGGG---
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCcccccc--CCCCeEEeCCCCEEeecccchhhChhhHHh---
Confidence 4568999999999965 334467899999999999998765422 356789999999999999999999964421
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 008993 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (547)
Q Consensus 121 ~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g 200 (547)
.|... ..+...++...
T Consensus 81 ----~g~~~---------------------------------~~~l~~wl~~~--------------------------- 96 (451)
T 4dyk_A 81 ----RGLAD---------------------------------DLPLMTWLQDH--------------------------- 96 (451)
T ss_dssp ----TTSSC---------------------------------SSCHHHHHHHT---------------------------
T ss_pred ----ccCCC---------------------------------CCCHHHHHHHh---------------------------
Confidence 11000 00111111110
Q ss_pred CCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccch
Q 008993 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (547)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 280 (547)
..... ....++++.+.....+...+.+.|+|++.++... .
T Consensus 97 -----------------------------~~~~~--~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~ 136 (451)
T 4dyk_A 97 -----------------------------IWPAE--GQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY---------P 136 (451)
T ss_dssp -----------------------------HHHHH--HHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC---------H
T ss_pred -----------------------------hhhhh--hccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC---------H
Confidence 00000 0124556677777888888899999999887421 1
Q ss_pred hHHHHHHHHHhhCCCCeeEEEEc-c--Cc---cc----hhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc
Q 008993 281 EDFADVYQWASYSEKMKIRVCLF-F--PL---ET----WSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE 349 (547)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~ 349 (547)
+...+ .+.+.+ +...+... . +. .. ..+..++...... ...+... +........+. .+..
T Consensus 137 ~~~~~---a~~~~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~----~~~~~~~~~~~~~l~~ 206 (451)
T 4dyk_A 137 QAICG---VVHDSG-VRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLKH--HPRIRIA----FGPHAPYTVSDDKLEQ 206 (451)
T ss_dssp HHHHH---HHHHHT-CEEEEEEEECSSCBTTBSSHHHHHHHHHHHHHHTTT--CSSEEEE----EEECCGGGSCHHHHHH
T ss_pred HHHHH---HHHHcC-CeEEEEchhhCCCCccccCHHHHHHHHHHHHHHhcC--CCceEEE----EecCCCCccCHHHHHH
Confidence 12222 222222 22222211 1 11 11 1222222222111 1112111 11222111111 1111
Q ss_pred -----------eeEEeccc-HHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccC
Q 008993 350 -----------VAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLD 413 (547)
Q Consensus 350 -----------v~~H~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~ 413 (547)
+++|+.+. ..+..+++.+ -+.+...+..+.+..++|+.++++++++++++.|+.+.+||.++.
T Consensus 207 ~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~- 285 (451)
T 4dyk_A 207 ILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNL- 285 (451)
T ss_dssp HHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHH-
T ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhh-
Confidence 88898654 3455544433 133455677888999999999999999999999999999998543
Q ss_pred ChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 414 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 414 ~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
.++ ...+|++.+.++|+++++|||++.+ ..+++.+++.+....... .....+++++++|+++
T Consensus 286 -------~~~-----~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~al~~~ 349 (451)
T 4dyk_A 286 -------KLA-----SGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAV----YGQATALDAHRALRMA 349 (451)
T ss_dssp -------HTT-----CCCCCHHHHHHHTCCEEECCCCGGGSSCCCHHHHHHHHHHHHHHH----HTCTTSSCHHHHHHHH
T ss_pred -------hcc-----CCcccHHHHHhCCCeEEEECCCCccCCCCCHHHHHHHHHHHhhhh----cCCCCCCCHHHHHHHH
Confidence 222 4567899999999999999998865 468999998776321100 0135689999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--C----hhhh----cCCeEEEEEECcEEeCC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~----~~~~----~~~~v~~v~v~G~~v~~ 547 (547)
|.|||+++|+++++|+|++||.|||||+|.|++. + ...+ ...+|..||++|++||+
T Consensus 350 T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 415 (451)
T 4dyk_A 350 TLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVYDPVSQLIYASGRDCVRHVWVGGRQLLD 415 (451)
T ss_dssp THHHHHHHTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHHCCGGGEEEEEETTEEEEE
T ss_pred HHHHHHHcCCCCCCcCcCCCCcCCEEEEeCCCCccCCCCCHHHHhhccCCCCCccEEEECCEEEEE
Confidence 9999999999998999999999999999999764 1 1222 24589999999999873
No 9
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=100.00 E-value=1.1e-35 Score=308.29 Aligned_cols=342 Identities=17% Similarity=0.170 Sum_probs=225.1
Q ss_pred CcccEEEEcCEEEeCCCCC-ceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSL-LFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMAR 121 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~-~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~ 121 (547)
.|.+++|+|++|+|+.+.. ..+++|+|+||||++|++.... +.++++||++|++|+|||||+|+|+.......
T Consensus 2 ~m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~-- 75 (426)
T 2r8c_A 2 SLTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIK----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNL-- 75 (426)
T ss_dssp --CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCC----CSSCEEEECTTCEEEECEEEEEECTTCCSSCH--
T ss_pred CcccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCC----CCCCeEEECCCCEEcCCeEeeeeccccccCCc--
Confidence 3567999999999997553 3567999999999999985321 46779999999999999999999996442100
Q ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCC
Q 008993 122 VKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGI 201 (547)
Q Consensus 122 ~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~ 201 (547)
...
T Consensus 76 ----------------------------------------------~~~------------------------------- 78 (426)
T 2r8c_A 76 ----------------------------------------------PRV------------------------------- 78 (426)
T ss_dssp ----------------------------------------------HHH-------------------------------
T ss_pred ----------------------------------------------hhh-------------------------------
Confidence 000
Q ss_pred CCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchh
Q 008993 202 TNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWE 281 (547)
Q Consensus 202 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 281 (547)
...+.+............+.+.|+|++.+++... .
T Consensus 79 ------------------------------------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~---------~ 113 (426)
T 2r8c_A 79 ------------------------------------ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAG---------Y 113 (426)
T ss_dssp ------------------------------------HHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCC---------H
T ss_pred ------------------------------------ccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCch---------H
Confidence 0122234445566677888899999999986321 1
Q ss_pred HHHHHHHHHhhCCCCeeEEEEccC------------------------------------ccchhhHHHHHHhcCCCCCC
Q 008993 282 DFADVYQWASYSEKMKIRVCLFFP------------------------------------LETWSSLADLINKTGHVLSD 325 (547)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~ 325 (547)
.+.+.+........+++...+ .+..++..+.+++..+..
T Consensus 114 ---~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g-- 188 (426)
T 2r8c_A 114 ---PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMG-- 188 (426)
T ss_dssp ---HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHT--
T ss_pred ---HHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcC--
Confidence 222222222222234332100 122333333333221111
Q ss_pred cEEEceEEEEEcCCcCcchh----------hhhc-----------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEe
Q 008993 326 WVYLGGVKAFADGSLGSNSA----------LFHE-----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIE 384 (547)
Q Consensus 326 ~~~~~~~~~~~d~~~~~~~~----------~~~~-----------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (547)
...+|.+.+|.+..... .+.. +.+|+.+..+++.++++ + ...++
T Consensus 189 ---~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~al~~--------G----~~~i~ 253 (426)
T 2r8c_A 189 ---ADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVRC--------G----VRTIE 253 (426)
T ss_dssp ---CSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHT--------T----CSEEE
T ss_pred ---CCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHc--------C----CCEEe
Confidence 13467777765442211 1111 88998877665554442 2 45899
Q ss_pred ecCCCChhHHHHHHhCCcEEEec-----Ccccc----CChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC-
Q 008993 385 HAQHLASGTAARFGDQGIVASMQ-----PQHLL----DDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD- 454 (547)
Q Consensus 385 H~~~~~~~~l~~~~~~g~~~~~~-----p~~~~----~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~- 454 (547)
|+.++++++++++++.|+.+..+ |.+.. .........++..+. ....+++.+.++|+++++|||++...
T Consensus 254 H~~~~~~~~~~~~~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~Gv~v~lgTD~~~~~~ 332 (426)
T 2r8c_A 254 HGNLIDDETARLVAEHGAYVVPTLVTYDALASEGEKYGLPPESIAKIADVHG-AGLHSIEIMKRAGVKMGFGTDLLGEAQ 332 (426)
T ss_dssp ECTTCCHHHHHHHHHTTCEEECCTHHHHHHHHHTTTTTCCHHHHTTSTTTGG-GHHHHHHHHHHTTCEECCCCCCCGGGG
T ss_pred cCCcCCHHHHHHHHHcCCeEeechHHHHHHhhhccccCCCHHHHHHHHHHHH-HHHHHHHHHHHcCCeEEEecCCCCCCC
Confidence 99999999999999999977432 11100 001223334444444 56678999999999999999987432
Q ss_pred CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcC--
Q 008993 455 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVS-- 532 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~-- 532 (547)
.....++... .+ .+|++++|+++|.|||+++|+++++|+|++||.|||||+|.||++++..+..
T Consensus 333 ~~~~~e~~~~-------------~~-~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~p~~~~~~~~~~~ 398 (426)
T 2r8c_A 333 RLQSDEFRIL-------------AE-VLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHADVLVVDGNPLKSVDCLLGQG 398 (426)
T ss_dssp GGTTHHHHHH-------------TT-TSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGGTCSSS
T ss_pred cchHHHHHHH-------------Hh-cCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcCCEEEECCChHhCHHHHhCcC
Confidence 2233333321 22 3899999999999999999999989999999999999999999997766532
Q ss_pred CeEEEEEECcEEeCC
Q 008993 533 ASIEATYVSGVQAYP 547 (547)
Q Consensus 533 ~~v~~v~v~G~~v~~ 547 (547)
.+|..||++|++||+
T Consensus 399 ~~v~~v~~~G~~v~~ 413 (426)
T 2r8c_A 399 EHIPLVMKDGRLFVN 413 (426)
T ss_dssp TTCCEEEETTEEEEE
T ss_pred CcceEEEECCEEEec
Confidence 589999999999873
No 10
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=100.00 E-value=5.2e-35 Score=305.37 Aligned_cols=369 Identities=20% Similarity=0.218 Sum_probs=239.2
Q ss_pred CcccEEEEcCEEEeCCC--CCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDD--SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMA 120 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~--~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~ 120 (547)
.+++++|+|++|+++++ ....+++|+|+||||++||+..+... ++++++||++|++|+|||||+|+|+.....
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~--~~~~~viD~~g~~v~PGlID~H~Hl~~~~~--- 78 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAG--LEADERLELPDHVLMPGLINLHGHSAMSLL--- 78 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTT--SCEEEEEEEEEEEEEECEEEEEECGGGGGG---
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEeccccccc--CCCCeEEeCCCcEEeeCccchhhChhhHhh---
Confidence 45689999999998754 34467899999999999999776431 356789999999999999999999964421
Q ss_pred ccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcC
Q 008993 121 RVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVG 200 (547)
Q Consensus 121 ~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g 200 (547)
.|... ..+...++...
T Consensus 79 ----~g~~~---------------------------------~~~~~~wl~~~--------------------------- 94 (447)
T 4f0r_A 79 ----RGLAD---------------------------------DKALMDWLTNY--------------------------- 94 (447)
T ss_dssp ----TTSSC---------------------------------SSCHHHHHHHT---------------------------
T ss_pred ----ccCCC---------------------------------CCCHHHHHHHh---------------------------
Confidence 00000 00111111110
Q ss_pred CCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccch
Q 008993 201 ITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSW 280 (547)
Q Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 280 (547)
+.... .+..++++...........+.+.|+|++.++... .
T Consensus 95 -----------------------------~~~~~--~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~---------~ 134 (447)
T 4f0r_A 95 -----------------------------IWPTE--GKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFY---------N 134 (447)
T ss_dssp -----------------------------HHHHH--HHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBSC---------H
T ss_pred -----------------------------hhhhh--hccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC---------H
Confidence 00000 0124556677778888999999999999997421 1
Q ss_pred hHHHHHHHHHhhCCCCeeEEEEcc---Cc---cchhhHH----HHHHhcCCCCCCcEEEceEEEEEcCCcCcchh-hhhc
Q 008993 281 EDFADVYQWASYSEKMKIRVCLFF---PL---ETWSSLA----DLINKTGHVLSDWVYLGGVKAFADGSLGSNSA-LFHE 349 (547)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~ 349 (547)
+ ...+.+.+.+ +...+.... +. ...++.. ++..... ....+... +..+.....+. .+..
T Consensus 135 ~---~~~~~~~~~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~----~~~~~~~~~~~~~l~~ 204 (447)
T 4f0r_A 135 A---AVARAGLASG-MRTFVGCSILEFPTNYASNADDYIAKGMAERSQFL--GEDLLTFT----LAPHAPYTVSDDTFRK 204 (447)
T ss_dssp H---HHHHHHHHHT-CEEEEEEEECSSCCSSCSSHHHHHHHHHHHHHTTT--TCTTEEEE----EEECCGGGSCHHHHHH
T ss_pred H---HHHHHHHHcC-CeEEEEchhcCCCcccccCHHHHHHHHHHHHHHhc--CCCceEEE----EecCCCCCCCHHHHHH
Confidence 1 2222223222 222222211 11 1122222 2222211 11222221 22222222111 1111
Q ss_pred -----------eeEEeccc-HHHHHHHHHH----HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccC
Q 008993 350 -----------VAIHAIGD-RANDLVLDMY----KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLD 413 (547)
Q Consensus 350 -----------v~~H~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~ 413 (547)
+++|+.+. ..+..+++.+ -+.+...+..+.+..+.|+.++++++++++++.|+.+.+||.++.
T Consensus 205 ~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~- 283 (447)
T 4f0r_A 205 VVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNM- 283 (447)
T ss_dssp HHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHH-
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhh-
Confidence 88898755 4555555432 133445677888999999999999999999999999999998542
Q ss_pred ChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 414 DADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 414 ~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
.++ ...++++.+.++|+++++|||++.+ ..+++.+++.+....... ...+.++|++++++++
T Consensus 284 -------~~~-----~~~~~~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~al~~~ 347 (447)
T 4f0r_A 284 -------KLA-----SGISPVSKLMDAGVAVGIGTDGAASNNKLDMLAETRLAALLAKVG----TLDPTSVPAAAAIRMA 347 (447)
T ss_dssp -------HTT-----CCCCCHHHHHHTTCEEEECCCCGGGTCCCCHHHHHHHHHHHHHHH----HTCTTSSCHHHHHHHH
T ss_pred -------hcC-----CCCCcHHHHHHCCCcEEEeCCCCcCCCCCCHHHHHHHHHHHhhhh----ccCCCCCCHHHHHHHH
Confidence 122 4556899999999999999999865 468999988765321100 0135689999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--C----hhhh----cCCeEEEEEECcEEeCC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWE--D----FAAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~----~~~~----~~~~v~~v~v~G~~v~~ 547 (547)
|.|||+++|+++++|+|+|||.|||||+|.+++. + ...+ ...+|..||++|++||+
T Consensus 348 T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 413 (447)
T 4f0r_A 348 TLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQVSHVWVKGRALMR 413 (447)
T ss_dssp THHHHHHTTCTTTSSSCCTTSBCCEEEEECCSGGGCSCSCHHHHHHHTCCGGGEEEEEETTEEEEE
T ss_pred HHHHHHHhCCCCCccccCCCCcCCEEEEeCCCCCcCCCcChHHHheecCCCCCceEEEECCEEEEE
Confidence 9999999999998999999999999999998654 1 1121 14689999999999873
No 11
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=100.00 E-value=7.3e-34 Score=294.28 Aligned_cols=144 Identities=15% Similarity=0.165 Sum_probs=120.3
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-C--CCC
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-A--DIN 456 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~--~~~ 456 (547)
...++|+.++++++++++++.|+.+.+||.++. .+ +. ...++++.++++|+++++|||++. + ..+
T Consensus 267 ~~~~~H~~~~~~~~i~~~~~~g~~~~~~p~~~~--------~l---~~-~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~ 334 (421)
T 2bb0_A 267 AVSADHLVGTSDEGIKKLAEAGTIAVLLPGTTF--------YL---GK-STYARARAMIDEGVCVSLATDFNPGSSPTEN 334 (421)
T ss_dssp CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HT---TC-CCCCCHHHHHHTTCCEEECCCBBTTTBCCCC
T ss_pred CcEEhhhhcCCHHHHHHHHHcCCeEEECCchhh--------hh---cc-cccchHHHHHHCCCeEEEeCCCCCCCCcccC
Confidence 457999999999999999999999999998542 11 11 345689999999999999999865 2 347
Q ss_pred hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeE
Q 008993 457 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASI 535 (547)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v 535 (547)
++..++.++. .+++|++++|+++|.|||+++|+++++|+|+|||+|||||+|.|++. ....+...+|
T Consensus 335 ~~~~~~~~~~------------~~~ls~~eal~~~T~~~A~~lg~~~~~Gsl~~Gk~ADlvvld~~~~~~~~~~~~~~~v 402 (421)
T 2bb0_A 335 IQLIMSIAAL------------HLKMTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRSADLVIWQAPNYMYIPYHYGVNHV 402 (421)
T ss_dssp HHHHHHHHHH------------HSCCCHHHHHHHTTHHHHHHTTCTTTSSCCSTTSBCCEEEESSSSTTHHHHSCSSCCE
T ss_pred HHHHHHHHhc------------ccCCCHHHHHHHHHHHHHHHhCccCCccccCCCCcCCEEEECCcccccCHhHcCCCce
Confidence 8888887653 24689999999999999999999988999999999999999999876 4444446689
Q ss_pred EEEEECcEEeCC
Q 008993 536 EATYVSGVQAYP 547 (547)
Q Consensus 536 ~~v~v~G~~v~~ 547 (547)
..||++|++||+
T Consensus 403 ~~t~v~G~~v~~ 414 (421)
T 2bb0_A 403 HQVMKNGTIVVN 414 (421)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCEEEEe
Confidence 999999999973
No 12
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=100.00 E-value=1.3e-33 Score=292.30 Aligned_cols=375 Identities=21% Similarity=0.251 Sum_probs=223.4
Q ss_pred CcccEEEEcCEEEeCCCC-----CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDS-----LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~-----~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 117 (547)
.+.+++|+|++|+++++. ...+++|+|+||||++||+..+.....++.+++||++|++|+|||||+|+|+..++.
T Consensus 13 ~~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~ 92 (419)
T 2puz_A 13 GNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGN 92 (419)
T ss_dssp --CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSC
T ss_pred CCCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhh
Confidence 346899999999998652 235779999999999999764321111124689999999999999999999865432
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHH
Q 008993 118 QMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQ 197 (547)
Q Consensus 118 ~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~ 197 (547)
...++..++. +.+| . ...
T Consensus 93 -----------~~~~~~~~~~-------------~~~~------------~--------------------------~~~ 110 (419)
T 2puz_A 93 -----------RAMEFEMRLN-------------GATY------------E--------------------------EIA 110 (419)
T ss_dssp -----------CHHHHHHHHT-------------TCCH------------H--------------------------HHH
T ss_pred -----------hHHHHHHHhc-------------CCCH------------H--------------------------HHH
Confidence 1111111110 0000 0 000
Q ss_pred HcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccc
Q 008993 198 LVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQ 277 (547)
Q Consensus 198 ~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 277 (547)
.. ++.+ .. .+.. .+..+.++........++.+.+.|+|++.++..+.. ..
T Consensus 111 ~~----------~gg~------------~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~--~~- 160 (419)
T 2puz_A 111 KA----------GGGI------------VS-SVRD----TRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGL--DI- 160 (419)
T ss_dssp HT----------TCSH------------HH-HHHH----HHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCC--SH-
T ss_pred hc----------CCCe------------ec-chhh----hccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCC--Cc-
Confidence 00 0000 00 0000 112355666677777889999999999988543211 10
Q ss_pred cchhHHHHHHHHHhhCCCCeeEEEEccCc---cch----hhHHH-----HHHhc-CCCCCCcEEEceEEEEEcCC-cC--
Q 008993 278 LSWEDFADVYQWASYSEKMKIRVCLFFPL---ETW----SSLAD-----LINKT-GHVLSDWVYLGGVKAFADGS-LG-- 341 (547)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~d~~-~~-- 341 (547)
.......+.++++.....+.+.......+ +.. .+..+ .+... ...... ..+.+.... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (419)
T 2puz_A 161 ETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLAD-----AVDGFCEGIAFSVK 235 (419)
T ss_dssp HHHHHHHHHHHHHTTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCS-----EECCEESTTSBCHH
T ss_pred hhHHHHHHHHHHHhhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhhhccccc-----ccccccCCCCcCHH
Confidence 11123344555544433333332222111 111 11111 11110 000111 111122211 11
Q ss_pred cchhhhh---c----eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCC
Q 008993 342 SNSALFH---E----VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDD 414 (547)
Q Consensus 342 ~~~~~~~---~----v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~ 414 (547)
.....+. + +++|+........ .+... ..+ ...++|+.++++++++++++.|+.+.+||.++.
T Consensus 236 ~~~~~~~~a~~~g~~v~~H~~~~~~~~~----~~~~~-~~g----~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~-- 304 (419)
T 2puz_A 236 EIDRVFAAAQQRGLPVKLHAEQLSNLGG----AELAA-SYN----ALSADHLEYLDETGAKALAKAGTVAVLLPGAFY-- 304 (419)
T ss_dssp HHHHHHHHHHHTTCCBEEEESSSSCCSH----HHHHH-HTT----CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--
T ss_pred HHHHHHHHHHHCCCcEEEEecccccCCH----HHHHH-hcC----CceehHhccCCHHHHHHHHHcCCcEEECCchhh--
Confidence 0000110 0 7888753211111 11111 112 457899999999999999999999999997432
Q ss_pred hhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC---CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 415 ADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA---DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 415 ~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
.+ +. ...++++.++++|+++++|||++.. ..+++..+..++.. +++|++++|+++
T Consensus 305 ------~l---~~-~~~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~------------~~ls~~~al~~~ 362 (419)
T 2puz_A 305 ------AL---RE-KQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATL------------FRMTVEECLTAT 362 (419)
T ss_dssp ------HH---TC-CCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHH------------HCCCHHHHHHHT
T ss_pred ------hh---cc-cccccHHHHHHCCCeEEEECCCCCCCCccccHHHHHHHhccc------------cCCCHHHHHHHH
Confidence 11 11 3456889999999999999998652 24788888765532 358999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|.|||+++|+++++|+|+|||.|||||+|.|++. ....+...+|..||++|++|.+
T Consensus 363 T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 419 (419)
T 2puz_A 363 TRNAAKALGLLAETGTLEAGKSADFAIWDIERPAELVYRIGFNPLHARIFKGQKVSP 419 (419)
T ss_dssp THHHHHHTTCTTTSSSCCTTSBCCEEEECCSSTTHHHHCBSCCCEEEEEETTEECC-
T ss_pred HHHHHHHcCCCCCccccCCCCcCCEEEECCCchhcchhhhcCCceEEEEECCEEcCC
Confidence 9999999999988999999999999999999887 4344446689999999999863
No 13
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=2.2e-33 Score=296.74 Aligned_cols=378 Identities=15% Similarity=0.138 Sum_probs=222.6
Q ss_pred CcccEEEEcCE-EEeCCCC------CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccc
Q 008993 43 LEADLVVTNGV-IFTGDDS------LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (547)
Q Consensus 43 ~~~~~li~n~~-v~~~~~~------~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~ 115 (547)
++++++|+|++ |+++++. ...+++|+|+||||++||+..+ ++.+++||++|++|+|||||+|+|+..+
T Consensus 8 ~~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-----~~~~~viD~~G~~v~PG~ID~H~H~~~~ 82 (492)
T 2paj_A 8 TQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-----RPGETIVDATDCVIYPAWVNTHHHLFQS 82 (492)
T ss_dssp --CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-----CTTCEEEECBTCEEEECEECCCCCGGGG
T ss_pred CCCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-----CCCCeEEECCCcEEeeCccccccChhhH
Confidence 44689999999 9998732 3467799999999999998642 2456899999999999999999999755
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHH
Q 008993 116 GLQMARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVA 195 (547)
Q Consensus 116 ~~~~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~ 195 (547)
... |.... ...+...|+.+..
T Consensus 83 ~~~-------g~~~~-----------~~~~~~~~l~~~~----------------------------------------- 103 (492)
T 2paj_A 83 LLK-------GEPAG-----------LDATLTPWLAATP----------------------------------------- 103 (492)
T ss_dssp GCC-------SCC-------------------------------------------------------------------
T ss_pred hhc-------CccCC-----------CCCCHHHHHHhcc-----------------------------------------
Confidence 210 00000 0000000110000
Q ss_pred HHHcCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcc
Q 008993 196 LQLVGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGES 275 (547)
Q Consensus 196 l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 275 (547)
+...+..++++.....+.+++.+.+.|+|++.++....+...
T Consensus 104 --------------------------------------~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~ 145 (492)
T 2paj_A 104 --------------------------------------YRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGM 145 (492)
T ss_dssp ----------------------------------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTC
T ss_pred --------------------------------------cchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhccccc
Confidence 001133566778888888899999999999999864222111
Q ss_pred cccchhHHHHHHHHHhhCCCCeeEEEEccC---cc------------------chhhHHHHHHhcCCCCC-CcEEEceEE
Q 008993 276 VQLSWEDFADVYQWASYSEKMKIRVCLFFP---LE------------------TWSSLADLINKTGHVLS-DWVYLGGVK 333 (547)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~ 333 (547)
... .. +.+.+..++.+ +++.+... .. ...+..++......... .. ++
T Consensus 146 ~~~---~~-~~~~~~~~~~g--~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 214 (492)
T 2paj_A 146 PFD---SS-AILFEEAEKLG--LRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAM-----RR 214 (492)
T ss_dssp SSC---HH-HHHHHHHHHTT--CEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCS-----EE
T ss_pred ccc---hH-HHHHHHHHHcC--CEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCc-----eE
Confidence 111 22 22222222223 44433211 00 01112222222111000 11 22
Q ss_pred EEE-cCCc-Ccchh-hhhc-----------eeEEecc-cHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHH
Q 008993 334 AFA-DGSL-GSNSA-LFHE-----------VAIHAIG-DRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTA 394 (547)
Q Consensus 334 ~~~-d~~~-~~~~~-~~~~-----------v~~H~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l 394 (547)
... .... ...+. .+.+ +.+|+.+ ...++.+++.+. +.....+..+.+..++|+.+++++++
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i 294 (492)
T 2paj_A 215 VVMAPTTVLYSISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAFCGEHDWLGSDVWYAHLVKVDADEI 294 (492)
T ss_dssp EEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEEECC-------------CCCHHHHHHHTTCCSTTEEEESCCSCCHHHH
T ss_pred EEEecccCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHHHHHCCCCCCCcEEEEEecCCHHHH
Confidence 221 1111 11111 1111 8889875 334444443221 22334466667788999999999999
Q ss_pred HHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC--CCCChHHHHHHHHcccCCCC
Q 008993 395 ARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV--ADINPLCAIRTAMKRIPPGW 472 (547)
Q Consensus 395 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~--~~~~~~~~~~~~~~~~~~~~ 472 (547)
+++++.|+.+.+||.++. +++ ...+|++.++++|+++++|||++. ...+++.+++.+..+.....
T Consensus 295 ~~l~~~gv~v~~~p~~~~--------~l~-----~~~~p~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (492)
T 2paj_A 295 ALLAQTGTGVAHCPQSNG--------RLG-----SGICPVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARL 361 (492)
T ss_dssp HHHHHHTCEEEECHHHHH--------CC----------CCTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCEEEECchhhc--------ccC-----CCCCCHHHHHHCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHhhhhc
Confidence 999999999999997432 122 334578889999999999999864 35689999887664321000
Q ss_pred -----C-----CCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC------Chhhhc----C
Q 008993 473 -----D-----NAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE------DFAAEV----S 532 (547)
Q Consensus 473 -----~-----~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~------~~~~~~----~ 532 (547)
. ..+....++|++++|+++|.|||+++|++ ++|+|+|||.|||||+|.|++. +...+. .
T Consensus 362 ~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl~-~~Gsl~~Gk~ADlvvld~~~~~~~~~~~p~~~i~~~~~~ 440 (492)
T 2paj_A 362 GMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGLD-EVGKVAVGYAADIAVYRLDDPRYFGLHDPAIGPVASGGR 440 (492)
T ss_dssp -------------------CCHHHHHHHHTHHHHHHHTCT-TSSCCSTTSBCCEEEEECCSGGGTTCSSGGGHHHHSCSC
T ss_pred ccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCCC-CccccCCCCccCEEEEeCCCcccCCccCHHHHHHhcCCC
Confidence 0 00113467999999999999999999999 6999999999999999998642 223331 3
Q ss_pred CeEEEEEECcEEeCC
Q 008993 533 ASIEATYVSGVQAYP 547 (547)
Q Consensus 533 ~~v~~v~v~G~~v~~ 547 (547)
.+|..||++|++||+
T Consensus 441 ~~v~~v~v~G~~v~~ 455 (492)
T 2paj_A 441 PSVMALFSAGKRVVV 455 (492)
T ss_dssp CEEEEEEETTEEEEE
T ss_pred CCceEEEECCEEEEE
Confidence 489999999999873
No 14
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=100.00 E-value=6.5e-33 Score=286.89 Aligned_cols=341 Identities=18% Similarity=0.201 Sum_probs=220.9
Q ss_pred CcccEEEEcCEEEeCCCCCc-eeeEEEEECCEEEEeeChhHHHhhhcCCC--eEEeCCCCeeeccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLL-FADSMAIKNGRIVSVGNYSAVQQLAADGT--NVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~-~~~~I~I~~GrI~~ig~~~~~~~~~~~~~--~viD~~g~~v~PGlID~H~H~~~~~~~~ 119 (547)
+.++++|+|++|+++++..+ .+++|+|+||||++|++.. . ++++ ++||++|++|+|||||+|+|+......
T Consensus 5 ~~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~----~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~- 78 (418)
T 2qs8_A 5 VDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-I----SSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQS- 78 (418)
T ss_dssp --CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-C----CCTTSSEEEEEEEEEEEECEEEEEECTTCCCCC-
T ss_pred CCccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-C----CCCCcceEEECCCCEECCCeeeeeeccccCCCC-
Confidence 45588999999999976533 5679999999999999753 1 3456 899999999999999999998643110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 008993 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (547)
Q Consensus 120 ~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~ 199 (547)
..| +.
T Consensus 79 ---------------------------------~~~---------------~~--------------------------- 83 (418)
T 2qs8_A 79 ---------------------------------KAQ---------------AP--------------------------- 83 (418)
T ss_dssp ---------------------------------TTT---------------SC---------------------------
T ss_pred ---------------------------------Cch---------------hh---------------------------
Confidence 000 00
Q ss_pred CCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccc
Q 008993 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (547)
Q Consensus 200 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 279 (547)
+ ..+++..........+.+...|+|++.+++... .
T Consensus 84 -------------------------------------~-~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~-------~ 118 (418)
T 2qs8_A 84 -------------------------------------I-KVEREMQAILATQHAYVTFKSGFTTVRQVGDSG-------L 118 (418)
T ss_dssp -------------------------------------S-CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSS-------S
T ss_pred -------------------------------------h-cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCc-------c
Confidence 0 012233333444567888999999999974211 0
Q ss_pred hhHHHHHHHHHhhCCC-CeeEEEEcc----------C-------------------ccchhhHHHHHHhcCCCCCCcEEE
Q 008993 280 WEDFADVYQWASYSEK-MKIRVCLFF----------P-------------------LETWSSLADLINKTGHVLSDWVYL 329 (547)
Q Consensus 280 ~~~~~~~~~~~~~~~~-~~~~~~~~~----------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 329 (547)
. ...++.+.+.+. ...++.... . ....++..+.+++..... .
T Consensus 119 ~---~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~ 190 (418)
T 2qs8_A 119 V---AISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDG-----A 190 (418)
T ss_dssp H---HHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHT-----C
T ss_pred c---cHHHHHHHHCCCCCCCeEEecCccccccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcC-----C
Confidence 1 123333433332 122332211 0 001122333332211110 1
Q ss_pred ceEEEEEcCCcCcch----------hhhhc-----------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCC
Q 008993 330 GGVKAFADGSLGSNS----------ALFHE-----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH 388 (547)
Q Consensus 330 ~~~~~~~d~~~~~~~----------~~~~~-----------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~ 388 (547)
..+|.+.++++.... ..+.. +.+|+.++..+..+++. + ...++|+.+
T Consensus 191 ~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~~~~--------g----~~~i~H~~~ 258 (418)
T 2qs8_A 191 DGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEGMKRAIKA--------G----VDSIEHGTF 258 (418)
T ss_dssp SEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------T----CSEEEECTT
T ss_pred CEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHc--------C----CCEEEECCC
Confidence 257888877543211 11111 89999877666554431 2 358999999
Q ss_pred CChhHHHHHHhCCcEEEecCccccCChhHHH---HhhCh----hhh----hhhchHHHHHHHCCCeeeecCCCCCC-CCC
Q 008993 389 LASGTAARFGDQGIVASMQPQHLLDDADSAR---KKLGV----DRA----ERESYLFQSLLANNALLALGSDWPVA-DIN 456 (547)
Q Consensus 389 ~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~---~~~g~----~~~----~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~ 456 (547)
+++++++++++.|+.+ ||.+......... ..+++ ++. .....+++.++++|+++++|||++.. ..+
T Consensus 259 ~~~~~i~~l~~~gv~v--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~~~~~~ 336 (418)
T 2qs8_A 259 MDLEAMDLMIENGTYY--VPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQKHGT 336 (418)
T ss_dssp CCHHHHHHHHHHTCEE--ECCHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTTBCTTC
T ss_pred CCHHHHHHHHHCCCEE--eeeechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCcCCcch
Confidence 9999999999999864 5663211100000 00111 111 02346789999999999999998753 235
Q ss_pred hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEE
Q 008993 457 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 536 (547)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~ 536 (547)
++.++..+. +.++|++++|+++|.|||+++|+++++|+|+|||.|||+|+|.||++++..+. +++
T Consensus 337 ~~~e~~~~~-------------~~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~~~~~--~i~ 401 (418)
T 2qs8_A 337 NWKEFVYMV-------------ENGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLADLIAVKGNPIEDISVLE--NVD 401 (418)
T ss_dssp TTHHHHHHH-------------HTTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGGGG--GEE
T ss_pred HHHHHHHHH-------------HcCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCccCEEEECCChhhCHHHhc--Ccc
Confidence 667766533 23799999999999999999999988999999999999999999999888887 999
Q ss_pred EEEECcEEeC
Q 008993 537 ATYVSGVQAY 546 (547)
Q Consensus 537 ~v~v~G~~v~ 546 (547)
.||++|+++.
T Consensus 402 ~v~~~G~~~~ 411 (418)
T 2qs8_A 402 VVIKDGLLYE 411 (418)
T ss_dssp EEEETTEEEE
T ss_pred EEEECCEEEe
Confidence 9999999874
No 15
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=100.00 E-value=6e-33 Score=290.59 Aligned_cols=361 Identities=17% Similarity=0.148 Sum_probs=219.8
Q ss_pred cCCcccEEEEcCEEEeCCCCCc-eeeEEEE-ECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccc
Q 008993 41 TNLEADLVVTNGVIFTGDDSLL-FADSMAI-KNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQ 118 (547)
Q Consensus 41 ~~~~~~~li~n~~v~~~~~~~~-~~~~I~I-~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~ 118 (547)
+....+++|+|++|+++++..+ .+++|+| +||||++||+...... +..+++||++|++|+|||||+|+|+..++..
T Consensus 9 ~~~~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~--~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 86 (458)
T 2p9b_A 9 PIVEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSI--PAEYHYLDGTGKIVMPGLINAHTHLFSQGKP 86 (458)
T ss_dssp CCCCCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCC--CTTCEEEECTTCEEEECEEEEEECSCC----
T ss_pred CCCCCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCC--CCCCeEEECCCCEEccceeeeeecccccccc
Confidence 3455689999999999876433 4579999 9999999997322111 2456899999999999999999999754310
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHH
Q 008993 119 MARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQL 198 (547)
Q Consensus 119 ~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~ 198 (547)
. ....+.+++...++ ..
T Consensus 87 ~-----~~~~~~~~~~~~~~---------------------------------~~------------------------- 103 (458)
T 2p9b_A 87 L-----NPKLATPKGQRMVA---------------------------------TF------------------------- 103 (458)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-----cccccchhhhhhhh---------------------------------hh-------------------------
Confidence 0 00000000000000 00
Q ss_pred cCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCccccc
Q 008993 199 VGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQL 278 (547)
Q Consensus 199 ~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 278 (547)
+. ...+.+.....+....+.+.+.|+|++.+++...+
T Consensus 104 --------------------------~~-----------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~------ 140 (458)
T 2p9b_A 104 --------------------------AH-----------SPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGY------ 140 (458)
T ss_dssp ---------------------------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSS------
T ss_pred --------------------------hh-----------hcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCcc------
Confidence 00 00011122334555788889999999999753210
Q ss_pred chhHHHHHHHHHhhCCCC-eeEEEEccC-------c---------cchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcC
Q 008993 279 SWEDFADVYQWASYSEKM-KIRVCLFFP-------L---------ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLG 341 (547)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 341 (547)
. ...++.+.+.+.. ..+++...+ + ...++..+.+....... ...+|.+.+|++.
T Consensus 141 -~---~~~~~~~~~~g~~~g~r~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~ik~~~~g~~~ 211 (458)
T 2p9b_A 141 -E---VVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAG-----VNAIKIAATGGVT 211 (458)
T ss_dssp -H---HHHHHHHHHTTSSCCCEEECCCSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTT-----CSCEEEECSCCTT
T ss_pred -c---cHHHHHHHHcCCCCCCeEEecccccccCCCCCccccCccCCCHHHHHHHHHHHHHcC-----CCEEEEEecCCcC
Confidence 1 1233444444432 134432110 0 11222222222211111 1246777776542
Q ss_pred cch------------hhhhc-----------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHH
Q 008993 342 SNS------------ALFHE-----------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFG 398 (547)
Q Consensus 342 ~~~------------~~~~~-----------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~ 398 (547)
... ..+.+ +.+|+.+...+..++++ + ...++|+.+++++++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~i~~~~~~--------G----~~~i~H~~~~~~~~~~~~~ 279 (458)
T 2p9b_A 212 DAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQSPEGVRRSLLA--------G----VDTIEHGSVLDDELIGMFR 279 (458)
T ss_dssp SCCCC------CCCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHH--------T----CSEEEECCCCCHHHHHHHH
T ss_pred CCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc--------C----CCEEEECCCCCHHHHHHHh
Confidence 211 01111 88898776555443321 2 3589999999999999999
Q ss_pred ------hCCcEEEecCcc--ccC----Ch------hHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC---CCCh
Q 008993 399 ------DQGIVASMQPQH--LLD----DA------DSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA---DINP 457 (547)
Q Consensus 399 ------~~g~~~~~~p~~--~~~----~~------~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~---~~~~ 457 (547)
+.|+.+ +|.. ... .. +....+ ++.+......+++.++++|+++++|||++.. ..++
T Consensus 280 ~~~~~~~~g~~v--~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~ 356 (458)
T 2p9b_A 280 HNPNALRGYSAL--IPTLSAGLPLTLLGQDVTGITDIQLEN-SKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYAT 356 (458)
T ss_dssp CCTTSTTSCCEE--ECCHHHHHHHHHSCHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCTTCH
T ss_pred cccccccCCeEE--EeecchhhHHHhhhcccccCCHHHHHH-HHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCccccH
Confidence 899865 5654 110 00 000001 1222223456789999999999999997431 2346
Q ss_pred HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEE
Q 008993 458 LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEA 537 (547)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~ 537 (547)
+.++..... ..++|++++|+++|.|||+++|+++++|+|+|||.|||+|+|.||+.++..+. +|..
T Consensus 357 ~~e~~~~~~------------~~~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~ADlvvld~~p~~~~~~~~--~v~~ 422 (458)
T 2p9b_A 357 WRELELLVA------------YAGFSPAEALHAATAVNASILGVDAETGSLEVGKSADLLVLNANPLDDLRALE--HPAL 422 (458)
T ss_dssp HHHHHHHHH------------HHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEESSCTTTCGGGGT--SCSE
T ss_pred HHHHHHHHH------------hcCCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcCCEEEECCCchhCHHHhc--cceE
Confidence 666654321 13689999999999999999999988999999999999999999998776665 8999
Q ss_pred EEECcEEeCC
Q 008993 538 TYVSGVQAYP 547 (547)
Q Consensus 538 v~v~G~~v~~ 547 (547)
||++|++||+
T Consensus 423 v~v~G~~v~~ 432 (458)
T 2p9b_A 423 VIAAGHPVWR 432 (458)
T ss_dssp EEETTEECCS
T ss_pred EEECCEEEec
Confidence 9999999874
No 16
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=100.00 E-value=2.2e-33 Score=290.16 Aligned_cols=371 Identities=21% Similarity=0.222 Sum_probs=225.5
Q ss_pred ccEEEEcCEEEeCCCC-----CceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccc
Q 008993 45 ADLVVTNGVIFTGDDS-----LLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM 119 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~-----~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~ 119 (547)
++++|+|++|+++++. ...+++|+|+||||++||+..+... ...+++||++|++|+|||||+|+|+..++..
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~--~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~- 81 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG--PYPAHWQDMKGKLVTPGLIDCHTHLIFAGSR- 81 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC----CCTTSEECTTCEEEECEEEEEECCCCCSCC-
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccc--cCCCeEEeCCCCEECCcccccccCcchhhhh-
Confidence 5789999999998762 3357799999999999998654211 0145799999999999999999999755321
Q ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHc
Q 008993 120 ARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLV 199 (547)
Q Consensus 120 ~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~ 199 (547)
..++...+. |.+|. . ...
T Consensus 82 ----------~~~~~~~~~-------------g~~~~---------------~-----------------------~~~- 99 (416)
T 2q09_A 82 ----------AEEFELRQK-------------GVPYA---------------E-----------------------IAR- 99 (416)
T ss_dssp ----------HHHHHHHHT-------------TCCHH---------------H-----------------------HHH-
T ss_pred ----------HHHHHHHHh-------------cCCHH---------------H-----------------------hhh-
Confidence 111111100 00000 0 000
Q ss_pred CCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccc
Q 008993 200 GITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLS 279 (547)
Q Consensus 200 g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 279 (547)
.++.+. ..+. ..+..++++........++.+.+.|+|++.++..+.. .. ..
T Consensus 100 ---------~~g~~~-------------~~~~----~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~--~~-~~ 150 (416)
T 2q09_A 100 ---------KGGGII-------------STVR----ATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGL--TL-ED 150 (416)
T ss_dssp ---------TTCTHH-------------HHHH----HHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCC--SH-HH
T ss_pred ---------cCCcEe-------------ehhh----hccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCccc--Ch-Hh
Confidence 000000 0000 0122456677777788889999999999998653211 10 11
Q ss_pred hhHHHHHHHHHhhCCCCeeEEEEc---c-Cccc---hhhHHHH-----HHhc-CCCCCCcEEEceEEEEEcCC-cC--cc
Q 008993 280 WEDFADVYQWASYSEKMKIRVCLF---F-PLET---WSSLADL-----INKT-GHVLSDWVYLGGVKAFADGS-LG--SN 343 (547)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~---~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~d~~-~~--~~ 343 (547)
.....+.++++.+...+.+..... . +.+. ..+..+. .... .....+. .+.+.... .. ..
T Consensus 151 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 225 (416)
T 2q09_A 151 ELKMLRVARRLGEALPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADA-----VDVFCEHIGFSLAQT 225 (416)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSE-----EEEBBSTTSBCHHHH
T ss_pred HHHHHHHHHHHHhhCCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccc-----cccccCCCcCCHHHH
Confidence 123344444443333333322211 1 1110 0111111 1110 0111111 11122111 11 00
Q ss_pred hhhhh---c----eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChh
Q 008993 344 SALFH---E----VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDAD 416 (547)
Q Consensus 344 ~~~~~---~----v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~ 416 (547)
...+. + +.+|+........ ++... ..+ ...++|+.++++++++++++.|+.+.+||.++.
T Consensus 226 ~~~~~~a~~~g~~v~~H~~~~~~~~~----~~~~~-~~g----~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~---- 292 (416)
T 2q09_A 226 EQVYLAADQYGLAVKGHMDQLSNLGG----STLAA-NFG----ALSVDHLEYLDPEGIQALAHRGVVATLLPTAFY---- 292 (416)
T ss_dssp HHHHHHHHHTTCEEEEEESSSCCCSH----HHHHH-HTT----CSEEEECTTCCHHHHHHHHHHTCEEEECHHHHH----
T ss_pred HHHHHHHHHCCCcEEEEECCCCchHH----HHHHH-HcC----CCEEeecccCCHHHHHHHHHcCCeEEEcCccHH----
Confidence 01110 0 7888764321111 11111 122 357999999999999999999999999998542
Q ss_pred HHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC---CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHH
Q 008993 417 SARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA---DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTL 493 (547)
Q Consensus 417 ~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~ 493 (547)
.++ . ...+|++.++++|+++++|||++.. ..+++..++.++. ..++|++++|+++|.
T Consensus 293 ----~~~---~-~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~------------~~~l~~~~al~~~T~ 352 (416)
T 2q09_A 293 ----FLK---E-TKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACT------------LFGLTPVEAMAGVTR 352 (416)
T ss_dssp ----HTT---C-CCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHH------------HHCCCHHHHHHHTTH
T ss_pred ----hhc---c-ccccCHHHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHH------------HcCCCHHHHHHHHHH
Confidence 110 1 3456889999999999999998652 3588888887653 235899999999999
Q ss_pred HHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993 494 SAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 494 n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|||+++|+++++|+|+|||.|||+|+|.|++. .+..+...+|..||++|++||+
T Consensus 353 ~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 407 (416)
T 2q09_A 353 HAARALGEQEQLGQLRVGMLADFLVWNCGHPAELSYLIGVDQLVSRVVNGEETLH 407 (416)
T ss_dssp HHHHHTTCTTTSSSCCTTSBCCEEEESSSCTTHHHHSCSCCCEEEEEETTEECCC
T ss_pred HHHHHhCCCccceecCCCCCccEEEECCCchhhhhhhhccCcceEEEECCEEEEe
Confidence 99999999988999999999999999999877 3333345689999999999984
No 17
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=100.00 E-value=4.8e-32 Score=279.44 Aligned_cols=170 Identities=17% Similarity=0.126 Sum_probs=123.3
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhH-HHHhhChh---
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADS-ARKKLGVD--- 425 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~-~~~~~g~~--- 425 (547)
+.+|+.+...+..+++. + ...++|+.+.+++.++++++.|+.+..++......... ....+++.
T Consensus 222 v~~H~~~~~~i~~~~~~--------g----~~~i~H~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (408)
T 3be7_A 222 VAAHAHGLIGIKAAIKA--------G----VDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAGIREESLN 289 (408)
T ss_dssp EEEEECSHHHHHHHHHH--------T----CSEEEECTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTTTTTTCCHHHHH
T ss_pred EEEEeCCHHHHHHHHHc--------C----CCEEEECCCCCHHHHHHHHHCCCEEeeeecHHHHhhhhccccCCCHHHHH
Confidence 88998876665554331 2 35899999999999999999998775444221000000 00001110
Q ss_pred hh----hhhchHHHHHHHCCCeeeecCCCCCC-CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 426 RA----ERESYLFQSLLANNALLALGSDWPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 426 ~~----~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
+. .....+++.++++|+++++|||++.. ..+++.++.... +.++|++++++++|.|||+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~p~~~~~~~~~~~~-------------~~gls~~~al~~~T~n~A~~lg 356 (408)
T 3be7_A 290 KERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHGDNAKQFAYMV-------------EWGMTPLEAIQASTIKTATLFG 356 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEECCCCBTTBCTTCGGGHHHHHH-------------HTTCCHHHHHHTTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCchHHHHHHHHH-------------HcCCCHHHHHHHHHHHHHHHhC
Confidence 00 02246789999999999999998652 235566665432 2279999999999999999999
Q ss_pred cCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 501 LENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 501 l~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
++ ++|+|+|||.|||+|+|.||++++..+. +|..||++|++||+
T Consensus 357 l~-~~G~i~~G~~ADlvvld~~p~~~~~~~~--~v~~v~~~G~~v~~ 400 (408)
T 3be7_A 357 IE-NIGQIKEGFDADIVGVIENPLANIRTLE--EVAFVMKEGKVYKR 400 (408)
T ss_dssp CS-SCSSCCTTSBCCEEEESSCTTTCGGGTT--SCCEEEETTEEEEE
T ss_pred CC-cccccCCCCccCEEEECCCchhhHHHhh--ceeEEEECCEEEec
Confidence 99 6999999999999999999998777665 89999999999863
No 18
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=100.00 E-value=8.8e-32 Score=282.24 Aligned_cols=184 Identities=20% Similarity=0.240 Sum_probs=139.9
Q ss_pred eeEEeccc-HHHHHHHHHH------HHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhh
Q 008993 350 VAIHAIGD-RANDLVLDMY------KSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKL 422 (547)
Q Consensus 350 v~~H~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 422 (547)
+++|..+. ..++.+.+.+ -+.+...+..+++..++|+.++++++++++++.|+.+.+||.++. .+
T Consensus 259 v~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~--------~l 330 (476)
T 4aql_A 259 IQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNL--------SL 330 (476)
T ss_dssp EEEEESCSHHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HT
T ss_pred eEEEecCCHHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhh--------hh
Confidence 88887643 3344444422 234556788888999999999999999999999999999998643 22
Q ss_pred ChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 423 GVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 423 g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+ .+.+|++.+.++|+++++|||++. .+.+++.+++.+........ .......+++++++|+++|.|||+++|+
T Consensus 331 ~-----~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~l~~~~al~~aT~~~A~~lgl 404 (476)
T 4aql_A 331 S-----SGFLNVLEVLKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNILL-INKVNEKSLTLKEVFRLATLGGSQALGL 404 (476)
T ss_dssp T-----CCCCCHHHHHHTTCEEEECCCTTTSSCCCHHHHHHHHHHHHHHHH-HTTSSSSCCCHHHHHHHHTHHHHHHTTC
T ss_pred C-----cchHHHHHHHHCCCcEEEeCCCCCCCCCCHHHHHHHHHHHHhhhh-cccCCCCcCCHHHHHHHHHHHHHHHhCC
Confidence 2 456789999999999999999864 35789999887764311000 0011346899999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCC----CCCC-------------hhhh----cCCeEEEEEECcEEeCC
Q 008993 502 ENDVGSLSPGKIADFVILSTS----SWED-------------FAAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d----~~~~-------------~~~~----~~~~v~~v~v~G~~v~~ 547 (547)
++++|+|+|||.|||+|+|.+ |+.. ...+ ...+|..|||+|++||+
T Consensus 405 ~~~~G~l~~G~~ADlvv~d~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~~~~~V~~v~v~G~~v~~ 471 (476)
T 4aql_A 405 DGEIGNFEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVVP 471 (476)
T ss_dssp TTTSSSCCTTSBCCEEEECTTCTTCSCCCCTHHHHSSSTTHHHHHHHHHCCGGGEEEEEETTEEEEC
T ss_pred CCCcceeCCCCCCCEEEEcCCCCCCccccccccccCCchhcHHHHHhhcCCCCCccEEEECCEEEec
Confidence 998999999999999999998 3321 1111 13479999999999974
No 19
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=3.6e-32 Score=285.60 Aligned_cols=185 Identities=19% Similarity=0.230 Sum_probs=136.8
Q ss_pred eeEEeccc-HHHHHHHHH------HHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhh
Q 008993 350 VAIHAIGD-RANDLVLDM------YKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKL 422 (547)
Q Consensus 350 v~~H~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~ 422 (547)
+++|+.+. ..+..+.+. .-......+..+.+..++|+.++++++++++++.|+.+.+||.++. .+
T Consensus 231 v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~--------~l 302 (475)
T 2ood_A 231 VNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNL--------FL 302 (475)
T ss_dssp EEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHH--------HT
T ss_pred EEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhh--------hc
Confidence 77888643 334444332 1123334455667888999999999999999999999999998532 22
Q ss_pred ChhhhhhhchHHHHHHHCCCe--eeecCCCCC-CCCChHHHHHHHHcccC-----CCCC-----CCC--CCCCCCCHHHH
Q 008993 423 GVDRAERESYLFQSLLANNAL--LALGSDWPV-ADINPLCAIRTAMKRIP-----PGWD-----NAW--IPSERISLTDA 487 (547)
Q Consensus 423 g~~~~~~~~~~~~~l~~~Gv~--~~~GTD~~~-~~~~~~~~~~~~~~~~~-----~~~~-----~~~--~~~~~l~~~~a 487 (547)
+ ...+|++.++++|++ +++|||++. .+.+++.+++.++.+.. ..+. ..+ ..+.+++++++
T Consensus 303 ~-----~~~~~~~~~~~~Gv~~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~a 377 (475)
T 2ood_A 303 G-----SGLFRLGRATDPEHRVKMSFGTDVGGGNRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRG 377 (475)
T ss_dssp T-----CCCCCHHHHTCTTSCCEEEECCCBTTBSCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHH
T ss_pred c-----cCcCCHHHHHhCCCCCcEEEEccCCCCCCcCHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHH
Confidence 2 455789999999999 999999876 45789988888754311 0000 000 01268999999
Q ss_pred HHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCC-hhh----------------h-----------cCCeEEEEE
Q 008993 488 LIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWED-FAA----------------E-----------VSASIEATY 539 (547)
Q Consensus 488 l~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~-~~~----------------~-----------~~~~v~~v~ 539 (547)
|+++|.|||+++|+++++|+|+|||.|||||+|.|++.. ... + ...+|..||
T Consensus 378 l~~~T~~~A~~lgl~~~~GsL~~Gk~ADlvvld~~~~~~~~~~~~~~~~~~~s~~~~~~~~~p~~~~~~~~~~~~V~~t~ 457 (475)
T 2ood_A 378 FWSVTLGGAEGLYIDDKLGNFEPGKEADFVALDPNGGQLAQPWHQSLIADGAGPRTVDEAASMLFAVMMVGDDRCVDETW 457 (475)
T ss_dssp HHHTTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTCSSTTHHHHHTTC--CCSCCSHHHHHHHHHHHHHHCCGGGEEEEE
T ss_pred HHHHHHHHHHHhCCCCCceeeCCCCccCEEEEeCCCccccccccccccccccccccccchhhHHHHHHhhCCCCCeeEEE
Confidence 999999999999999889999999999999999998662 111 1 146999999
Q ss_pred ECcEEeCC
Q 008993 540 VSGVQAYP 547 (547)
Q Consensus 540 v~G~~v~~ 547 (547)
++|++||+
T Consensus 458 v~G~~v~~ 465 (475)
T 2ood_A 458 VMGKRLYK 465 (475)
T ss_dssp ETTEEEEE
T ss_pred ECCEEEEE
Confidence 99999973
No 20
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=100.00 E-value=3.6e-32 Score=279.92 Aligned_cols=366 Identities=17% Similarity=0.162 Sum_probs=215.8
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
.+.+++|+|++|+++.+. ++|+|+||||++||+... ++..++||++|++|+|||||+|+|+..........
T Consensus 3 ~~~~~li~n~~v~~~~~~----~~v~I~~g~I~~vg~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~ 73 (403)
T 2qt3_A 3 KDFDLIIRNAYLSEKDSV----YDIGIVGDRIIKIEAKIE-----GTVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGER 73 (403)
T ss_dssp CCEEEEEEEEEETTTTEE----EEEEEETTEEEEEESSCC-----SCEEEEEECTTCBEEECEEEEEECGGGTTTTCSSS
T ss_pred cccceEEEeeEecCCCee----EEEEEECCEEEEeecCCC-----CCccceEcCCCCEecccceeeeeccchhhcccccc
Confidence 456899999999987542 699999999999998643 12457999999999999999999996442100000
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~ 202 (547)
...+ . +.+ + ....
T Consensus 74 ~~~~---------------------------------~---------------g~~-~----------~~~~-------- 86 (403)
T 2qt3_A 74 LPKF---------------------------------W---------------SRP-Y----------TRDA-------- 86 (403)
T ss_dssp SCTT---------------------------------C---------------SSC-C----------CHHH--------
T ss_pred cccc---------------------------------c---------------CCC-c----------ccCc--------
Confidence 0000 0 000 0 0000
Q ss_pred CCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhH
Q 008993 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (547)
Q Consensus 203 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 282 (547)
.+.+ ...... . .+.++...........+.+.|+|++.++....+... -...+.
T Consensus 87 ---------------------~l~~-~~~~~~---~-~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~-~~~~~~ 139 (403)
T 2qt3_A 87 ---------------------AIED-GLKYYK---N-ATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAK-TKAVEA 139 (403)
T ss_dssp ---------------------HHHH-HHHHHH---H-CCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTT-THHHHH
T ss_pred ---------------------CHHH-HHHHhh---h-cCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccc-cchHHH
Confidence 0000 000000 1 255666666777788888999998866543221110 001122
Q ss_pred HHHHHHHHhhCCCCeeEEEEccCc--cchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcch-hhhhc----------
Q 008993 283 FADVYQWASYSEKMKIRVCLFFPL--ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNS-ALFHE---------- 349 (547)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~---------- 349 (547)
..+..+++ .+.....+...... ....+..+.++.......... ++ +.-+.....+ ..+..
T Consensus 140 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~---~~p~~~~~~~~~~l~~~~~~A~~~g~ 212 (403)
T 2qt3_A 140 VLEAKEEL--KDLIDIQVVAFAQSGFFVDLESESLIRKSLDMGCDLV--GG---VDPATRENNVEGSLDLCFKLAKEYDV 212 (403)
T ss_dssp HHHHHHHH--TTTCEEEEEEECTTCTTTSTTHHHHHHHHHHTTCSEE--EC---BCTTTTTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHh--hcceeEEEEEcCCcccccCcchHHHHHHHHhcCCCeE--EE---ecCCCCCCChHHHHHHHHHHHHHcCC
Confidence 22333322 22233333322111 011122222222111101111 11 1111111111 11111
Q ss_pred -eeEEecccHH-HHHHHHHHHHHHHhcCCCCCCceEeecCCCCh-------hHHHHHHhCCcEEEecCccccCChhHHHH
Q 008993 350 -VAIHAIGDRA-NDLVLDMYKSVVVTTGKRDQRFRIEHAQHLAS-------GTAARFGDQGIVASMQPQHLLDDADSARK 420 (547)
Q Consensus 350 -v~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~-------~~l~~~~~~g~~~~~~p~~~~~~~~~~~~ 420 (547)
+++|+.+... ....++.+-+.....+. +.+..++|+.++++ ++++++++.|+.+.+||...
T Consensus 213 ~v~~H~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~~--------- 282 (403)
T 2qt3_A 213 DIDYHIHDIGTVGVYSINRLAQKTIENGY-KGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSST--------- 282 (403)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHHHHHTTC-TTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTTC---------
T ss_pred CeEEEeCCcccchhHHHHHHHHHHHHcCC-CCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCCC---------
Confidence 7888764432 22222222222233454 56889999999876 78999999999999999631
Q ss_pred hhChhhhhhhchHHHHHHHCCCeeeecCCCCC------CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 008993 421 KLGVDRAERESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLS 494 (547)
Q Consensus 421 ~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n 494 (547)
....+++.++++|+++++|||++. ...+++..+..+..... + ..+++++++|+++|.|
T Consensus 283 --------~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~------~--~~~~~~~~al~~~T~~ 346 (403)
T 2qt3_A 283 --------PPTMPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLE------L--KTNRDLGLIWKMITSE 346 (403)
T ss_dssp --------CTTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTT------C--CSHHHHHHHHHHTTHH
T ss_pred --------CCCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhC------c--CCccCHHHHHHHHHHH
Confidence 334578999999999999999862 12377887776554321 1 1237999999999999
Q ss_pred HHHHcccCCCcccccCCCcccEEEEcCCC-CCChhhhcCCeEEEEEECcEEeCC
Q 008993 495 AARACFLENDVGSLSPGKIADFVILSTSS-WEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 495 ~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~-~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
||+++|+++ +|+|+|||.|||+|+|.++ +..+.. ..+|..||++|++||+
T Consensus 347 ~A~~lg~~~-~g~i~~G~~ADlvv~d~~~~~~~~~~--~~~v~~v~v~G~~v~~ 397 (403)
T 2qt3_A 347 GARVLGIEK-NYGIEVGKKADLVVLNSLSPQWAIID--QAKRLCVIKNGRIIVK 397 (403)
T ss_dssp HHHHHTCGG-GCSSSTTSBCCEEEESSSSHHHHHHH--CCCEEEEEETTEEEEE
T ss_pred HHHhcCCCc-ccCCCCCCcCCEEEEcCCChHHHhhc--CCCccEEEECCEEEec
Confidence 999999998 4999999999999999985 443222 4589999999999873
No 21
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=2e-31 Score=279.03 Aligned_cols=181 Identities=18% Similarity=0.153 Sum_probs=138.3
Q ss_pred eeEEec-ccHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|.. +...++.+.+.+. +.+...+..+.+..+.|+.++++++++++++.|+.+.+||.++. .++
T Consensus 238 v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~--------~l~- 308 (458)
T 4f0l_A 238 VHIHVAEQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLCPVTEA--------NLG- 308 (458)
T ss_dssp EEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHH--------HTT-
T ss_pred EEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEECccccc--------ccc-
Confidence 788876 5555655555432 23444567788999999999999999999999999999998543 222
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPP--GWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.+.+|++.+.++|+++++|||+ ..+.+++.+++.+...... .....+..+.+++++++|+++|.|||+++|+
T Consensus 309 ----~~~~~~~~~~~~Gv~v~lgtD~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~- 382 (458)
T 4f0l_A 309 ----DGTFNATEFAAAGGKFGIGSDS-NVLIGIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR- 382 (458)
T ss_dssp ----CCCCCHHHHHHTTCEEEECCBT-TSSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC-
T ss_pred ----CCCccHHHHHHCCCeEEEECCC-CCCCCHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC-
Confidence 4556899999999999999995 3457899888876543211 1111233456799999999999999999999
Q ss_pred CCcccccCCCcccEEEEcCCCCC--Chhhh--------cCCeEEEEEECcEEeCC
Q 008993 503 NDVGSLSPGKIADFVILSTSSWE--DFAAE--------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 503 ~~~GsI~~Gk~ADlvv~d~d~~~--~~~~~--------~~~~v~~v~v~G~~v~~ 547 (547)
+ +|+|+|||.|||+|+|.++.. +..++ .. +|..||++|++||+
T Consensus 383 ~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~-~v~~v~v~G~~v~~ 435 (458)
T 4f0l_A 383 P-EDGLKKGASADFVSLDVERLPHAKGDVVLDGWIFAGRA-HVCDVWVRGVKQVE 435 (458)
T ss_dssp T-TCSSSTTSBCCEEEEECTTSTTCCHHHHHHHHHHTSCC-EEEEEEETTEEEEE
T ss_pred C-CCcCCCCCcCCEEEEeCCCCccCCcccHHHhCeEcCCC-CceEEEECCEEEEE
Confidence 3 899999999999999998654 22222 14 89999999999873
No 22
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=100.00 E-value=1.1e-32 Score=286.25 Aligned_cols=370 Identities=15% Similarity=0.157 Sum_probs=224.2
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARV 122 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~ 122 (547)
.+++++|+|++|+++. ..++|+|+||||++||+..... ++++++||++|++|+|||||+|+|+.....
T Consensus 6 ~~~~~li~n~~v~~~~----~~~~v~I~~g~I~~vg~~~~~~---~~~~~viD~~G~~v~PGlID~H~Hl~~~~~----- 73 (430)
T 1ra0_A 6 NNALQTIINARLPGEE----GLWQIHLQDGKISAIDAQSGVM---PITENSLDAEQGLVIPPFVEPHIHLDTTQT----- 73 (430)
T ss_dssp --CCCEEEEEBCTTCC----SEEEEEEETTEEEEEEEESSCC---CCCTTEEECTTCEEESCEEEEEECTTTTTC-----
T ss_pred CCCcEEEEeeEecCCC----ceeEEEEECCEEEEeecCCCCC---CCCcceEccCCCEecccccccccchhhhhh-----
Confidence 4567899999999875 4669999999999999764321 145689999999999999999999864311
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCC
Q 008993 123 KLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGIT 202 (547)
Q Consensus 123 ~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~ 202 (547)
.+.. .+....+...++
T Consensus 74 --~~~~------------------------------~~~~~~~~~~~l-------------------------------- 89 (430)
T 1ra0_A 74 --AGQP------------------------------NWNQSGTLFEGI-------------------------------- 89 (430)
T ss_dssp --TTSS------------------------------SCCSSCCHHHHH--------------------------------
T ss_pred --cCCC------------------------------cCCCCCCHHHHH--------------------------------
Confidence 0000 000000000111
Q ss_pred CCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhH
Q 008993 203 NLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWED 282 (547)
Q Consensus 203 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 282 (547)
..+....+..+.++.....+.+...+.+.|+|++.++....... ...+..
T Consensus 90 ----------------------------~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~--~~~~~~ 139 (430)
T 1ra0_A 90 ----------------------------ERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDAT--LTALKA 139 (430)
T ss_dssp ----------------------------HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTT--CHHHHH
T ss_pred ----------------------------HHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChH--HHHHHH
Confidence 00111123456677788888889999999999999976321110 111222
Q ss_pred HHHHHHHHhhCCCCeeEEEEccC-----ccchhh-HHHHHHhcCCCCCCcEEEceEEEEEcCCcCc--chh-hhhc----
Q 008993 283 FADVYQWASYSEKMKIRVCLFFP-----LETWSS-LADLINKTGHVLSDWVYLGGVKAFADGSLGS--NSA-LFHE---- 349 (547)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~-~~~~---- 349 (547)
..+..+.+ ...+.+.+..... .+...+ ..+.... + ...+ ++ ....... .+. .+..
T Consensus 140 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g---~~~~--~~----~~~~~~~~~~~~~~l~~~~~~ 207 (430)
T 1ra0_A 140 MLEVKQEV--APWIDLQIVAFPQEGILSYPNGEALLEEALRL-G---ADVV--GA----IPHFEFTREYGVESLHKTFAL 207 (430)
T ss_dssp HHHHHHHH--TTTCEEEEEEECTTCSSSSTTHHHHHHHHHHT-T---CSEE--CC----CGGGSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhh--hhhEEEEEEecCCcccccCchHHHHHHHHHHh-C---CCeE--ee----eecccccccccHHHHHHHHHH
Confidence 22222221 2333333322111 111111 2222221 1 1111 11 1111111 111 1111
Q ss_pred -------eeEEecc-cHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChh-------HHHHHHhCCcEEEecCccccCC
Q 008993 350 -------VAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASG-------TAARFGDQGIVASMQPQHLLDD 414 (547)
Q Consensus 350 -------v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~-------~l~~~~~~g~~~~~~p~~~~~~ 414 (547)
+.+|+.+ .......++.+.+.....+. +.+..++|+.+++++ +++++++.|+.+.+||.++...
T Consensus 208 A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~ 286 (430)
T 1ra0_A 208 AQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHL 286 (430)
T ss_dssp HHHHTCEEEEEECCSSCTTCCHHHHHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHH
T ss_pred HHHcCCCEEEEECCCCchhHHHHHHHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhh
Confidence 8888863 33333333333344444454 667899999999886 8999999999999999743211
Q ss_pred hhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC------CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHH
Q 008993 415 ADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV------ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDAL 488 (547)
Q Consensus 415 ~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 488 (547)
.. +..+..+. +...+++.++++|+++++|||++. ...+++.+++.++.+... ..+++++++|
T Consensus 287 ~~---~~~~~p~~-~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~al 354 (430)
T 1ra0_A 287 QG---RFDTYPKR-RGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQL--------MGYGQINDGL 354 (430)
T ss_dssp TT---TTCCSSCC-CCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTTC--------CSHHHHHGGG
T ss_pred cc---ccCCCCCc-CCCCCHHHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHHHHHHHcc--------CCcccHHHHH
Confidence 00 00111122 345678999999999999999853 346899999877654321 1236999999
Q ss_pred HHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-ChhhhcCCeEEEEEECcEEeCC
Q 008993 489 IAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 489 ~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+++|.|||+++|+++ |+|+|||.|||+|+|.++.. .+.. ..+|..||++|++||+
T Consensus 355 ~~~T~~~A~~lg~~~--G~i~~G~~ADlvv~d~~~~~~~~~~--~~~v~~v~~~G~~v~~ 410 (430)
T 1ra0_A 355 NLITHHSARTLNLQD--YGIAAGNSANLIILPAENGFDALRR--QVPVRYSVRGGKVIAS 410 (430)
T ss_dssp GGGTHHHHHHTTCSS--CSSCTTSBCCEEEESSSSHHHHHHH--TCCCSEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCC--cccCCCCcCCEEEEcCCChhHHHhc--cCcceEEEECCEEEec
Confidence 999999999999986 99999999999999987533 2222 4589999999999873
No 23
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=100.00 E-value=5.4e-31 Score=274.25 Aligned_cols=374 Identities=18% Similarity=0.185 Sum_probs=225.2
Q ss_pred CCcccEEEEcCEEEeCCC---CCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeecccccccccccccccc
Q 008993 42 NLEADLVVTNGVIFTGDD---SLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQ 118 (547)
Q Consensus 42 ~~~~~~li~n~~v~~~~~---~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~ 118 (547)
+.|.+++|+|++|+++++ ....+++|+|+||||++||+..... ++.+++||++|++|+|||||+|+|+.....
T Consensus 6 ~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~~viD~~G~~v~PGlID~H~H~~~~~~- 81 (439)
T 2i9u_A 6 KDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDK---YKGNPIIDFRNNIIIPGMNDLHAHASQYKN- 81 (439)
T ss_dssp ---CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGG---GTTSCEEEEEEEEEEECEEEEEEEGGGGGG-
T ss_pred CCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEeccccccc---CCCceEEcCCCeEEEecceecccccchHhh-
Confidence 467789999999999862 2235779999999999999643210 135689999999999999999999975421
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHH
Q 008993 119 MARVKLRGVSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQL 198 (547)
Q Consensus 119 ~~~~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~ 198 (547)
.|.. + ..+...+++..
T Consensus 82 ------~g~~--------------------------~-------~~~~~~~~~~~------------------------- 97 (439)
T 2i9u_A 82 ------LGIG--------------------------M-------DKELLPWLNNY------------------------- 97 (439)
T ss_dssp ------TTCC--------------------------C-------SSCHHHHHHHT-------------------------
T ss_pred ------hCCc--------------------------C-------CCCHHHHHHhc-------------------------
Confidence 0000 0 00000111000
Q ss_pred cCCCCCCCCCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCccccc
Q 008993 199 VGITNLSEDPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQL 278 (547)
Q Consensus 199 ~g~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 278 (547)
.......+ .+.+..........+.+.+.|+|++.++...
T Consensus 98 -------------------------------~~p~~~~~--~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~-------- 136 (439)
T 2i9u_A 98 -------------------------------TFPEEAKF--LNVDYAKKTYGRLIKDLIKNGTTRVALFATL-------- 136 (439)
T ss_dssp -------------------------------HHHHHHGG--GSHHHHHHHHHHHHHHHHHTTEEEEEEECCS--------
T ss_pred -------------------------------ccchhhcc--CCHHHHHHHHHHHHHHHHhcCceEEEEcccc--------
Confidence 00000000 1344555666677889999999999987531
Q ss_pred chhHHHHHHHHHhhCCCCeeEEEE-cc----Cc---c----chhhHHHHHHhcCCCCCCcEEEceEEEE-EcCCcCcch-
Q 008993 279 SWEDFADVYQWASYSEKMKIRVCL-FF----PL---E----TWSSLADLINKTGHVLSDWVYLGGVKAF-ADGSLGSNS- 344 (547)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~- 344 (547)
..+.....++.+.+.+ ....... .. +. + ...+..++++..... ...+ +.. ........+
T Consensus 137 ~~~~~~~~~~~~~~~g-~r~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~i-----~~~~~~~~~~~~~~ 209 (439)
T 2i9u_A 137 HKDSTIELFNMLIKSG-IGAYVGKVNMDYNCPDYLTENYITSLNDTEEIILKYKDK-SNIV-----KPIITPRFVPSCSN 209 (439)
T ss_dssp CHHHHHHHHHHHHHHT-CEEEEECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTTT-CSSE-----EECBEECCGGGCCH
T ss_pred ccchHHHHHHHHHHcC-CEEEEEeeeccccCCcccchhHHHHHHHHHHHHHHHhCC-CCce-----EEEEecCCcCcCCH
Confidence 1122233444443333 2221111 11 10 0 112223333322111 1112 221 111111111
Q ss_pred h----hhh---c----eeEEecc-cHHHHHHHHHH------HHHHHhcCCCC-CCceEeecCCCChhHHHHHHhCCcEEE
Q 008993 345 A----LFH---E----VAIHAIG-DRANDLVLDMY------KSVVVTTGKRD-QRFRIEHAQHLASGTAARFGDQGIVAS 405 (547)
Q Consensus 345 ~----~~~---~----v~~H~~~-~~~~~~~~~~~------~~~~~~~~~~~-~~~~i~H~~~~~~~~l~~~~~~g~~~~ 405 (547)
. .+. + +.+|+.+ ..+++.+.+.+ -+.....+... .+..+.|+.++++++++++++.|+.+.
T Consensus 210 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~ 289 (439)
T 2i9u_A 210 ELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIV 289 (439)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCCcEEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEE
Confidence 1 111 1 8889874 44455444321 11233455555 677899999999999999999999999
Q ss_pred ecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCH
Q 008993 406 MQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLCAIRTAMKRIPPGWDNAWIPSERISL 484 (547)
Q Consensus 406 ~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 484 (547)
+||.++. .++ ...++++.++++|+++++|||++. ...+++.+++.++...............++|+
T Consensus 290 ~~p~~~~--------~l~-----~~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 356 (439)
T 2i9u_A 290 HCPTSNF--------NLG-----SGMMPVRKYLNLGINVVLGSDISAGHTCSLFKVIAYAIQNSKIKWQESGKKDMFLST 356 (439)
T ss_dssp ECHHHHH--------HTT-----CCCCCHHHHHHTTCEEEECCCBTTBCCSCHHHHHHHHHHHHHHHHHHTTSCSCCCCH
T ss_pred ECccchh--------hcc-----cccCCHHHHHHCCCcEEEecCCCCCCCcCHHHHHHHHHHHhccccccccCCCCCCCH
Confidence 9997532 122 345689999999999999999876 35689998877663211000000013468999
Q ss_pred HHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCCh--------hhh----cCCeEEEEEECcEEeCC
Q 008993 485 TDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDF--------AAE----VSASIEATYVSGVQAYP 547 (547)
Q Consensus 485 ~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~--------~~~----~~~~v~~v~v~G~~v~~ 547 (547)
+++|+++|.|||+++| ++|+|+|||.|||+|+|.+++... ..+ ...+|..||++|++||+
T Consensus 357 ~~al~~~T~~~A~~lg---~~Gsl~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 428 (439)
T 2i9u_A 357 SEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDSNLYPEDYDLTERLERFIYLGDDRNIMKRYVCGNEIFG 428 (439)
T ss_dssp HHHHHHHTHHHHTTTS---SCSSCSTTCBCCEEEECCTTSCGGGSCHHHHHHHHHHHCCGGGEEEEEETTEEEC-
T ss_pred HHHHHHHHHHHHHHhc---cCCccCCCCccCEEEEeCCCccccCCCccCHHHHheecCCCCCeeEEEECCEEEee
Confidence 9999999999999999 489999999999999999976421 111 13489999999999974
No 24
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=100.00 E-value=1.9e-31 Score=280.17 Aligned_cols=158 Identities=20% Similarity=0.230 Sum_probs=118.7
Q ss_pred HHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCC
Q 008993 371 VVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 371 ~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
....+....+..+.|+.++.+.+.+++++.+..+..+|.+.. ..+ ....+.+.+.+.|+++++|||.
T Consensus 282 ~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~~-----~~~~~~~~~~~~~~~v~~gtD~ 348 (479)
T 3hpa_A 282 AEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNM--------RLA-----SGIAPVKKMRLAGVPVGLGVDG 348 (479)
T ss_dssp HHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHH--------HTT-----CCCCCHHHHHHHTCCEEECCCC
T ss_pred HhhhccccccceeeeeEecchhHHHHHHhcCCceeecccccc--------ccc-----cCccchhHHHhcCCcEEeeccc
Confidence 344566777889999999999999999999999999987432 111 4456788999999999999998
Q ss_pred CCCC--CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCC------
Q 008993 451 PVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTS------ 522 (547)
Q Consensus 451 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d------ 522 (547)
..++ ..+......+...... .....++|++++|+++|.|||++||+++ +|+|+|||+|||||||.|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ls~~eal~~~T~~~A~~lgl~~-~G~I~~G~~ADlvv~D~~~~~~~~ 422 (479)
T 3hpa_A 349 SASNDGAQMVAEVRQALLLQRV-----GFGPDAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDLRQPLFAG 422 (479)
T ss_dssp TTSSCCCCHHHHHHHHHHHHHH-----HHCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCSTTSBCCEEEEETTSGGGTT
T ss_pred cccCCCccHHHHHHHHHHHHhh-----hccccCCCHHHHHHHHHHHHHHHhCCCC-CccCCCCCcCCEEEEcCCCccccC
Confidence 7654 3444444333221100 1135679999999999999999999976 899999999999999977
Q ss_pred CCCC-hhhhc---CCeEEEEEECcEEeCC
Q 008993 523 SWED-FAAEV---SASIEATYVSGVQAYP 547 (547)
Q Consensus 523 ~~~~-~~~~~---~~~v~~v~v~G~~v~~ 547 (547)
+..+ ...+. ..+|.+|||+|++||+
T Consensus 423 ~~~dp~~~lv~~~~~~v~~tiV~G~~V~~ 451 (479)
T 3hpa_A 423 ALHDPVAALVFCAPSQTAYTVVNGKVVVR 451 (479)
T ss_dssp CTTSHHHHHHHSSCCCCSEEEETTEEEEE
T ss_pred CccCHHHHhhccCCCCceEEEECCEEEEE
Confidence 2332 22221 4579999999999873
No 25
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=100.00 E-value=1.4e-32 Score=282.12 Aligned_cols=165 Identities=22% Similarity=0.287 Sum_probs=128.6
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.....+..+++..++. + .+..+.|+....+ +++++++.|+.+.+||.+...... .+ +. .
T Consensus 223 v~iHa~~~~~i~~~~~~~~~~----g---~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~~----~~---~~-~ 286 (396)
T 3ooq_A 223 ARMHAHRADDILTAIRIAEEF----G---FNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTKL----EL---KD-L 286 (396)
T ss_dssp EEEEECSHHHHHHHHHHHHHH----T---CCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCSG----GG---TT-C
T ss_pred EEEEECchhHHHHHHHHHHHc----C---CCEEEecCchHHH-HHHHHHHCCCCEEECcccccccch----hH---Hh-h
Confidence 888987777666666655543 2 3679999998875 599999999999999975432211 00 11 4
Q ss_pred hchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccccc
Q 008993 430 ESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLS 509 (547)
Q Consensus 430 ~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~ 509 (547)
...+++.+.++|+++++|||++..+..++....... .+.+++++++++++|.|||+++|+++++|+|+
T Consensus 287 ~~~~~~~l~~~Gv~v~lgtD~~~~~~~~l~~~~~~~------------~~~gl~~~~al~~~T~n~A~~lg~~~~~G~i~ 354 (396)
T 3ooq_A 287 TMETIAKLLKDGVLIALMCDHPVIPLEFATVQAATA------------MRYGAKEEDLLKILTVNPAKILGLEDRIGSIE 354 (396)
T ss_dssp CTTHHHHHHHTTCCEEECCTTTTSCGGGHHHHHHHG------------GGGTCCHHHHHHTTTHHHHHHTTCTTTSSSCC
T ss_pred hhHHHHHHHHCCCEEEEEcCCCccCccHHHHHHHHH------------HHcCCCHHHHHHHHHHHHHHHhCCCCCeeeEC
Confidence 557899999999999999999876655443222211 23479999999999999999999999899999
Q ss_pred CCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 510 PGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 510 ~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
+||.||||++|.||++. ..+|..||++|++||+
T Consensus 355 ~G~~ADlvv~d~~~~~~-----~~~v~~v~~~G~~v~~ 387 (396)
T 3ooq_A 355 PGKDADLVVWSGHPFDM-----KSVVERVYIDGVEVFR 387 (396)
T ss_dssp TTSBCCEEEESSCTTST-----TCCEEEEEETTEEEEE
T ss_pred CCCcCCEEEECCCcccc-----ccceeEEEECCEEEeC
Confidence 99999999999999874 2489999999999873
No 26
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.98 E-value=3.1e-31 Score=274.40 Aligned_cols=147 Identities=14% Similarity=0.106 Sum_probs=118.8
Q ss_pred CCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--C
Q 008993 377 RDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA--D 454 (547)
Q Consensus 377 ~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~ 454 (547)
.+.+..+.|+.++++++++++++.|+.+.+||.++. .++ .+.+|++.+ +|+++++|||++.+ +
T Consensus 249 ~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~--------~~~-----~~~~~~~~~--~Gv~v~lgtD~~~~~~~ 313 (427)
T 3v7p_A 249 KELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNR--------LLG-----NGVLDLEKI--KSIPYAIATDGLSSNYS 313 (427)
T ss_dssp TTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHH--------HTT-----CCCCCTTTT--TTSCEEECCCCTTSCSC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHH--------Hhc-----CCCCCHHHH--CCCeEEEeCCCCCCCCC
Confidence 466888999999999999999999999999998543 222 345577777 99999999997654 5
Q ss_pred CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-Ch-hh---
Q 008993 455 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE-DF-AA--- 529 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~-~~-~~--- 529 (547)
.+++.+++.+..+.. ..+..++++++++++|.|||+++|++ +|+|++||.|||+|+|.+... .. .+
T Consensus 314 ~~~~~~~~~a~~~~~-------~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~l~~G~~Ad~~~~d~~~~~~~~~~~~~~ 384 (427)
T 3v7p_A 314 LNMYEELKAALFVHP-------NKEATTFAKELIIRATKAGYDALGFE--GGEIAVGKDADMQLIDLPEGLTNVEDLYLH 384 (427)
T ss_dssp CCHHHHHHHHHHHST-------TSCHHHHHHHHHHHHTHHHHHHHTCS--CSSCCTTSBCCEEEEECCTTCCCGGGHHHH
T ss_pred CCHHHHHHHHHHhcc-------CCCcccCHHHHHHHHHHHHHHHhCCC--CceeCCCCccCEEEEcCCCccCCCccchHH
Confidence 789999998876542 12335788999999999999999997 799999999999999988543 21 11
Q ss_pred --hcCCeEEEEEECcEEeCC
Q 008993 530 --EVSASIEATYVSGVQAYP 547 (547)
Q Consensus 530 --~~~~~v~~v~v~G~~v~~ 547 (547)
....+|..||++|++||+
T Consensus 385 ~~~~~~~v~~v~v~G~~v~~ 404 (427)
T 3v7p_A 385 VILHTTKPKKVYIQGEEHVR 404 (427)
T ss_dssp HHHHCSSCSEEEETTEEEEC
T ss_pred HhcccCCccEEEECCEEEEE
Confidence 125689999999999874
No 27
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.97 E-value=3.6e-30 Score=268.70 Aligned_cols=182 Identities=20% Similarity=0.179 Sum_probs=138.8
Q ss_pred eeEEec-ccHHHHHHHHHHH----HHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhCh
Q 008993 350 VAIHAI-GDRANDLVLDMYK----SVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~ 424 (547)
+++|+. +..+++.+.+.+. +.+...+..+.+..++|+.++++++++++++.|+.+.+||.++. +++
T Consensus 229 v~~H~~e~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~sn~--------~lg- 299 (453)
T 3mdu_A 229 VHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEA--------NLG- 299 (453)
T ss_dssp EEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHH--------HTT-
T ss_pred EEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECchhHh--------hcC-
Confidence 888975 4555666555542 23445577888999999999999999999999999999998542 233
Q ss_pred hhhhhhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 425 DRAERESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPP---GWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
.+.+|++.+.++|+++++|||++. +.+++.+++.+...... .....+..+++++++++++++|.|||+++|+
T Consensus 300 ----~g~~p~~~~~~~Gv~v~lgtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~ 374 (453)
T 3mdu_A 300 ----DGIFPATDFLAQGGRLGIGSDSHV-SLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ 374 (453)
T ss_dssp ----CCCCCHHHHHHTTCEEEECCBTCS-CCCHHHHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS
T ss_pred ----CCCCCHHHHHHCCCEEEEECCCCC-CCCHHHHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC
Confidence 456789999999999999999754 57899888877642110 1112233455899999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCC----Chhhhc--------CCeEEEEEECcEEeCC
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWE----DFAAEV--------SASIEATYVSGVQAYP 547 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~----~~~~~~--------~~~v~~v~v~G~~v~~ 547 (547)
++|+|++||.|||+++|.+... +..++. ..+|..||++|++||+
T Consensus 375 --~~G~l~~G~~AD~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~~ 430 (453)
T 3mdu_A 375 --PIGSLAVGRRADLLVLDGNDPYLASAEGDALLNRWLFAGGDRQVRDVMVAGRWVVR 430 (453)
T ss_dssp --SCSSCCTTSBCCEEEECTTCHHHHTCCHHHHHHHHHHHCCGGGEEEEEETTEEEEB
T ss_pred --CCCccCCCCcCCEEEEeCCCccccCCCccChHHHheeeCCCCCeeEEEECCEEEEE
Confidence 4899999999999999987421 122221 3589999999999874
No 28
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.97 E-value=5.6e-31 Score=274.53 Aligned_cols=182 Identities=19% Similarity=0.219 Sum_probs=118.2
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-hhHHHHHHhCCcEEEe-cCcc-----------------
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTAARFGDQGIVASM-QPQH----------------- 410 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~-~~~l~~~~~~g~~~~~-~p~~----------------- 410 (547)
+.+|+.+......+.+.++.. .+......+++|+.... ++.++++.+.++.+.. +|..
T Consensus 246 V~iHae~l~e~g~Vedalea~---~Gr~ih~~HiEgag~~hapd~i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~ 322 (570)
T 4ac7_C 246 VAIHSDTLNEAGFLEDTLRAI---NGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVC 322 (570)
T ss_dssp EEEECCTTCSSCCHHHHHHHH---TTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCGGGSSCBTTHHHHHHHHHHHH
T ss_pred EEEEcCCcchhhHHHHHHHHh---CCCcceeEeeeccccccChHHHHHhccCCccccccCCCCCcccchhHHhhhheeee
Confidence 788876443322223333322 12222223333433333 6778888888887764 4431
Q ss_pred ------ccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC--C----hHHHHHHH-HcccCCCCCCCCC
Q 008993 411 ------LLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI--N----PLCAIRTA-MKRIPPGWDNAWI 477 (547)
Q Consensus 411 ------~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~--~----~~~~~~~~-~~~~~~~~~~~~~ 477 (547)
...+..+...++.. ...++++.|.+.|+.+++|||++..+. . .|.....+ ..+....+. .+
T Consensus 323 hhl~~~i~~D~~~a~~Rir~----~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~~~~a~~~~~~rg~l~~~-~~- 396 (570)
T 4ac7_C 323 HHLKQNIPEDVAFADSRIRP----ETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEE-KN- 396 (570)
T ss_dssp TTCCTTCHHHHHHHHHHSCH----HHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHHHHHHHHHHHHHCSCTTC-CT-
T ss_pred cccCccccchhHHHHhhhhh----hhcccccchhhcCCEEEEECcccccCCcCcccCcHHHHHHHHHHhcCCCCCc-cc-
Confidence 01122334445544 344789999999999999999987541 2 23322222 112111111 12
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 478 PSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 478 ~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
.+++++++++|+++|.|||+++|+++++|+|++||.||||+||.|++. .++..||++|++||+
T Consensus 397 ~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~~-------~~v~~t~~~G~~v~~ 459 (570)
T 4ac7_C 397 GSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFG-------VKADRVIKGGIIAYA 459 (570)
T ss_dssp TCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGTT-------TSCSEEEETTEEEEE
T ss_pred cccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECchhcc-------CceEEEEECCEEEEc
Confidence 467899999999999999999999998999999999999999999874 378999999999973
No 29
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.97 E-value=5.6e-31 Score=274.53 Aligned_cols=182 Identities=19% Similarity=0.210 Sum_probs=118.2
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-hhHHHHHHhCCcEEEe-cCccc----------------
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLA-SGTAARFGDQGIVASM-QPQHL---------------- 411 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~-~~~l~~~~~~g~~~~~-~p~~~---------------- 411 (547)
+.+|+.+......+.+.++.. .+......+++|+.... ++.++++.+.++.+.. +|...
T Consensus 246 V~iHae~l~e~g~Vedalea~---~Gr~ih~~HiEgag~~hapd~i~~~~~~~vlps~t~Pt~p~~~n~~~e~ld~l~v~ 322 (570)
T 4ubp_C 246 VAIHSDTLNEAGFLEDTLRAI---NGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVC 322 (570)
T ss_dssp EEEECCTTCSSCCHHHHHHHH---TTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCSTTSSCBTTHHHHHHHHHHHH
T ss_pred EEEEcCCcchhhHHHHHHHHh---CCCceeEEEecccccccChHHHHHhccCCccccccCCCCCcccchhHHhhhheeee
Confidence 788876443322223333322 12222223333433333 6778888888887764 44410
Q ss_pred -------cCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCCC--C----hHHHHHHH-HcccCCCCCCCCC
Q 008993 412 -------LDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVADI--N----PLCAIRTA-MKRIPPGWDNAWI 477 (547)
Q Consensus 412 -------~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~~--~----~~~~~~~~-~~~~~~~~~~~~~ 477 (547)
..+..+...++.. ...++++.|.+.|+.+++|||++..+. . .|.....+ ..+....+. .+
T Consensus 323 hhl~~~i~~D~~~a~~Rir~----~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~~~~a~~~~~~rg~l~~~-~~- 396 (570)
T 4ubp_C 323 HHLKQNIPEDVAFADSRIRP----ETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEE-KN- 396 (570)
T ss_dssp HTCCTTSHHHHHHHHHHSCH----HHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHHHHHHHHHHHHHCSCTTC-CS-
T ss_pred cccCccccchhHHHHhhhhh----hccccccchhhcCCEEEEECcccccCCcCcccCcHHHHHHHHHHhcCCCCCc-cc-
Confidence 1122234445544 344789999999999999999987541 2 23322222 112111111 12
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 478 PSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 478 ~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
.+++++++++|+++|.|||+++|+++++|+|++||.||||+||.|++. .++..||++|++||+
T Consensus 397 ~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~ADlvvld~d~~~-------~~v~~t~~~G~~v~~ 459 (570)
T 4ubp_C 397 GSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFADLVLWEPKFFG-------VKADRVIKGGIIAYA 459 (570)
T ss_dssp SCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBCCEEEECGGGTT-------TSCSEEEETTEEEEE
T ss_pred cccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCccCEEEECccccc-------CCeeEEEECCEEEEe
Confidence 467899999999999999999999998999999999999999999874 378999999999973
No 30
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.97 E-value=1.5e-29 Score=256.85 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=85.8
Q ss_pred hhchHHHHHHHCCCeeeecCCCCCCC-CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCccc
Q 008993 429 RESYLFQSLLANNALLALGSDWPVAD-INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGS 507 (547)
Q Consensus 429 ~~~~~~~~l~~~Gv~~~~GTD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~Gs 507 (547)
....+.+.+.++|+.+.+|||++... ...+..+..++ +.|+|++|+|+++|.|||+++|+++++|+
T Consensus 298 ~~~~~~~~~~~~g~~~~~gt~~~~~~~~~~~~~~~~~~-------------~~gls~~eal~~~T~npA~~lgl~~~~Gs 364 (403)
T 3mtw_A 298 LQRENFRKALKAGVKMVYGTDAGIYPHGDNAKQFAVMV-------------RYGATPLQAIQSATLTAAEALGRSKDVGQ 364 (403)
T ss_dssp HHHHHHHHHHHHTCEEECCCCBTTBCTTCGGGHHHHHH-------------HTTCCHHHHHHHTTHHHHHHHTCTTTSSS
T ss_pred cccchhhHHHhcCCeEeeccCCcccccchHHHHHHHHH-------------HcCCCHHHHHHHHHHHHHHHhCCCCCcee
Confidence 33456788899999999999987654 34444444332 34799999999999999999999998999
Q ss_pred ccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEe
Q 008993 508 LSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQA 545 (547)
Q Consensus 508 I~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v 545 (547)
|+|||.|||||||.||++++..+. +|..||++|++|
T Consensus 365 I~~G~~ADlvvld~dPl~di~~~~--~v~~Vi~~G~vv 400 (403)
T 3mtw_A 365 VAVGRYGDMIAVAGDPLADVTTLE--KPVFVMKGGAVV 400 (403)
T ss_dssp CCTTSBCCEEEESSCTTTCGGGGG--SCSEEEETTEEE
T ss_pred eCCCCcceEEEECCChhHhHhhhc--CcCEEEECCEEE
Confidence 999999999999999999887776 899999999986
No 31
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.97 E-value=1.8e-30 Score=267.54 Aligned_cols=341 Identities=19% Similarity=0.167 Sum_probs=207.5
Q ss_pred EEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccCC
Q 008993 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (547)
Q Consensus 47 ~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~g 126 (547)
++|+|++|+++++....+++|+|+||||++||+.. +.++ ||++|++|+|||||+|+|+...... |
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~-------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~-------~ 65 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE-------VKVD-LDLSGKLVMPALFNTHTHAPMTLLR-------G 65 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS-------CCCS-EECTTEEEEECEEEEEECGGGGGGT-------T
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC-------Ccce-ecCCCcEEeecccchhhccchhhhc-------c
Confidence 47999999998654457789999999999999753 2346 9999999999999999999754210 0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCC
Q 008993 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (547)
Q Consensus 127 ~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 206 (547)
.. ...+...++...
T Consensus 66 ~~---------------------------------~~~~~~~~~~~~--------------------------------- 79 (406)
T 1p1m_A 66 VA---------------------------------EDLSFEEWLFSK--------------------------------- 79 (406)
T ss_dssp SS---------------------------------CSCCHHHHHHTT---------------------------------
T ss_pred cc---------------------------------CCCCHHHHHHhh---------------------------------
Confidence 00 000001111000
Q ss_pred CCCCCeEeeCCCCCcCEEEhhhHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHH
Q 008993 207 DPNGGTIMKTSSGEPTGLLIDAAMKLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADV 286 (547)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (547)
.+......+.++.......++..+.+.|+|++.++.. ..+. .
T Consensus 80 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~---------~~~~---~ 121 (406)
T 1p1m_A 80 --------------------------VLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF---------HEEW---I 121 (406)
T ss_dssp --------------------------HHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES---------SHHH---H
T ss_pred --------------------------hccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh---------CHHH---H
Confidence 0000123455666777777788899999999988652 1122 2
Q ss_pred HHHHhhCCCCeeEEEEc---c--Cc---cchhhHHHHHHhcCCCCCCcEEEceEEEE-EcCCcCcch-----hhhh---c
Q 008993 287 YQWASYSEKMKIRVCLF---F--PL---ETWSSLADLINKTGHVLSDWVYLGGVKAF-ADGSLGSNS-----ALFH---E 349 (547)
Q Consensus 287 ~~~~~~~~~~~~~~~~~---~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~-----~~~~---~ 349 (547)
++.+.+. +++.+.. . +. +...+..+.++...... .. ++.. ........+ ..+. +
T Consensus 122 ~~~~~~~---g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----i~~~~~~~~~~~~~~~~l~~~~~~a~~ 192 (406)
T 1p1m_A 122 AKAVRDF---GMRALLTRGLVDSNGDDGGRLEENLKLYNEWNGFE-GR-----IFVGFGPHSPYLCSEEYLKRVFDTAKS 192 (406)
T ss_dssp HHHHHHH---CCEEEEEEEECCBTTBCTTHHHHHHHHHHHHTTGG-GT-----EEEEEEECCTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHc---CCEEEEEcccccCCCCHHHHHHHHHHHHHHhhCCC-Cc-----EEEEEecCccCcCCHHHHHHHHHHHHH
Confidence 2222222 2333221 1 11 11222223333211100 11 2211 111111111 1110 1
Q ss_pred ----eeEEeccc-HHHHHHHH--HHHHHHHhcCCCCCCceEeecC---CCChhHHHHHHhCCcEEEecCccccCChhHHH
Q 008993 350 ----VAIHAIGD-RANDLVLD--MYKSVVVTTGKRDQRFRIEHAQ---HLASGTAARFGDQGIVASMQPQHLLDDADSAR 419 (547)
Q Consensus 350 ----v~~H~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~i~H~~---~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~ 419 (547)
+++|+.+. ..++.+++ .+. ....+..+ ..+.|+. +++++++++++ .+||..+.
T Consensus 193 ~g~~v~~H~~~~~~~~~~~~~~~~~g--~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~------~~~p~~~~------- 255 (406)
T 1p1m_A 193 LNAPVTIHLYETSKEEYDLEDILNIG--LKEVKTIA--AHCVHLPERYFGVLKDIPFFV------SHNPASNL------- 255 (406)
T ss_dssp TTCCEEEEESCSTTCCCCTHHHHTTT--TTTSCEEE--EECTTCCGGGTTTTTTSSEEE------EECHHHHH-------
T ss_pred CCCcEEEEcCCCchHHHHHHHhhhCC--HhHcCcce--eEeeeccCcccCCHHHHHHHH------HhCcHHHh-------
Confidence 78888633 34444333 111 11122111 5788999 99998877655 66775321
Q ss_pred HhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC--CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 420 KKLGVDRAERESYLFQSLLANNALLALGSDWPVA--DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 420 ~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
+++ ...++++.++++|+++++|||++.. ..+++.+++.++.+... ....++|++++++++|.|||+
T Consensus 256 -~~~-----~~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ls~~~al~~~T~~~A~ 323 (406)
T 1p1m_A 256 -KLG-----NGIAPVQRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKA------QNPRNLDVNTCLKMVTYDGAQ 323 (406)
T ss_dssp -HTT-----CCCCCHHHHHHTTCEEEECCCCTTTTSCCCHHHHHHHHHHHHHT------TCTTSSCHHHHHHHHTHHHHH
T ss_pred -hcC-----CCcCcHHHHHhCCCeEEEECCCCcCCCCCCHHHHHHHHHHHhcc------cCCCCCCHHHHHHHHHHHHHH
Confidence 222 3345789999999999999998765 36889888877654220 115679999999999999999
Q ss_pred HcccCCCcccccCCCcccEEEEcCCCCC--Chhhhc--------CCeEEEEEECcEEeC
Q 008993 498 ACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV--------SASIEATYVSGVQAY 546 (547)
Q Consensus 498 ~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~~~~~~--------~~~v~~v~v~G~~v~ 546 (547)
++|+++ |+|+|||.|||+|+|.+++. +..++. ..+|..||++|++||
T Consensus 324 ~lgl~~--G~l~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v~ 380 (406)
T 1p1m_A 324 AMGFKS--GKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHAFSGEVFATMVAGKWIYF 380 (406)
T ss_dssp HHTCSC--SSCCTTSBCCEEEEECCSGGGCSGGGHHHHHHHTCCSCCSEEEETTEEEEE
T ss_pred HhCCCC--cccCCCCcccEEEEeCCccccCCccChHHHheEecCCCCceEEEECCEEEE
Confidence 999986 99999999999999998643 222221 468999999999986
No 32
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=99.97 E-value=2.5e-29 Score=263.18 Aligned_cols=157 Identities=18% Similarity=0.137 Sum_probs=100.9
Q ss_pred ceEeecCCCChhHHHHHH---hCC--cEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 381 FRIEHAQHLASGTAARFG---DQG--IVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 381 ~~i~H~~~~~~~~l~~~~---~~g--~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.++.|.. +.++++.++ +.| +.+.+||.+.....+.+.. ..++.+......+++.++++|+.+++|||
T Consensus 235 ~h~~H~~--~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD 312 (458)
T 1gkr_A 235 LIVLHVS--NPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSD 312 (458)
T ss_dssp EEECCCC--SHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCC
T ss_pred EEEEeCC--CHHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeC
Confidence 3444544 234455443 476 7888899876544333221 11111111233467789999999999999
Q ss_pred CCCCC--------CChHH----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCC
Q 008993 450 WPVAD--------INPLC----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPG 511 (547)
Q Consensus 450 ~~~~~--------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~G 511 (547)
+...+ .+++. .+...+.. +....++|++++++++|.|||+++|+++++|+|++|
T Consensus 313 ~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~--------~~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G 384 (458)
T 1gkr_A 313 HGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTN--------GVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVG 384 (458)
T ss_dssp EECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHH--------TGGGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTT
T ss_pred CCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHH--------HHHhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCC
Confidence 74332 12221 11111110 112347999999999999999999998779999999
Q ss_pred CcccEEEEcCCCCC--Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 512 KIADFVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 512 k~ADlvv~d~d~~~--~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
|+|||+|+|.++.. +..++. ..+|..||++|++||+
T Consensus 385 ~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~ 435 (458)
T 1gkr_A 385 SDADLLILDLDIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAE 435 (458)
T ss_dssp SBCCEEEEESCCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEE
T ss_pred CcCCEEEEcCCcceEEcHHHccccCCCCCcCCCEeeeEEEEEEECCEEEEE
Confidence 99999999988532 323322 2489999999999873
No 33
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.96 E-value=1.1e-29 Score=259.40 Aligned_cols=135 Identities=18% Similarity=0.157 Sum_probs=102.5
Q ss_pred eEeecCCCChhHHHHHHhCC-cEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCee-eecCCCCCCCCChHH
Q 008993 382 RIEHAQHLASGTAARFGDQG-IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALL-ALGSDWPVADINPLC 459 (547)
Q Consensus 382 ~i~H~~~~~~~~l~~~~~~g-~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~-~~GTD~~~~~~~~~~ 459 (547)
.+.|+.++++++++.+++.+ ..+.++|...... |+.........++.++++|+++ ..|||++ +..+++.
T Consensus 245 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------g~~~~~~~~~~~~~~~~~Gv~~~~~Gt~~g-~~~~~~~ 315 (382)
T 1yrr_A 245 IIADGLHVDYANIRNAKRLKGDKLCLVTDATAPA--------GANIEQFIFAGKTIYYRNGLCVDENGTLSG-SSLTMIE 315 (382)
T ss_dssp EECSSSSSCHHHHHHHHHHHGGGEEEECCBCTTT--------TSCCSEEEETTEEEEECSSCEECTTCCEEE-BCCCHHH
T ss_pred ecCcccccCHHHHHHHHHcCCCcEEEECcChHhc--------CCCCceEEECCEEEEEECCEEEeCCCcCcC-CccCHHH
Confidence 68899999999999988876 5555666543211 1000000011235677899987 5677764 2468898
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEE
Q 008993 460 AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATY 539 (547)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~ 539 (547)
+++.++. ..++|++++|+++|.|||++||+++++|+|+|||.|||+++|.|+ +|..||
T Consensus 316 ~~~~~~~------------~~g~~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvvld~~~----------~v~~v~ 373 (382)
T 1yrr_A 316 GVRNLVE------------HCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVANLTAFTPDF----------KITKTI 373 (382)
T ss_dssp HHHHHHH------------HHCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBCCEEEECTTS----------CEEEEE
T ss_pred HHHHHHH------------HhCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCCCCEEEECCCC----------CEEEEE
Confidence 8887663 236899999999999999999999889999999999999999986 899999
Q ss_pred ECcEEeCC
Q 008993 540 VSGVQAYP 547 (547)
Q Consensus 540 v~G~~v~~ 547 (547)
++|++||+
T Consensus 374 ~~G~~v~~ 381 (382)
T 1yrr_A 374 VNGNEVVT 381 (382)
T ss_dssp ETTEEEEE
T ss_pred ECCEEEEe
Confidence 99999873
No 34
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.96 E-value=1.1e-28 Score=251.84 Aligned_cols=105 Identities=12% Similarity=0.161 Sum_probs=84.6
Q ss_pred hhchHHHHHHHCCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccc
Q 008993 429 RESYLFQSLLANNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 508 (547)
Q Consensus 429 ~~~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI 508 (547)
....+...+.++|+.+.+|+|.+.............+ ..++|++|||+++|.|||++||+++++|+|
T Consensus 306 ~~~~~~~~~~~~g~~~~~g~d~~~~~~~~~~~~~~~~-------------~~gls~~eal~~~T~~pA~~lgl~~~~Gsi 372 (426)
T 3mkv_A 306 AGLHSIEIMKRAGVKMGFGTDLLGEAQRLQSDEFRIL-------------AEVLSPAEVIASATIVSAEVLGMQDKLGRI 372 (426)
T ss_dssp THHHHHHHHHHHTCCBCCCCCCCGGGGGGTTHHHHHH-------------HTTSCHHHHHHHTTHHHHHHTTCBTTBSSC
T ss_pred ccchhhHHhhhcCceeeeccCCcccccchHHHHHHHH-------------HhCCCHHHHHHHHHHHHHHHhCCCCCccee
Confidence 4445678899999999999998765443333333222 236899999999999999999999989999
Q ss_pred cCCCcccEEEEcCCCCCChhhhc--CCeEEEEEECcEEeC
Q 008993 509 SPGKIADFVILSTSSWEDFAAEV--SASIEATYVSGVQAY 546 (547)
Q Consensus 509 ~~Gk~ADlvv~d~d~~~~~~~~~--~~~v~~v~v~G~~v~ 546 (547)
+|||.|||||||.||++++..+. ..+|+.||++|++|.
T Consensus 373 ~~G~~ADlvvlD~dPl~di~~~~~~~~~v~~Vi~~G~vv~ 412 (426)
T 3mkv_A 373 VPGAHADVLVVDGNPLKSVDCLLGQGEHIPLVMKDGRLFV 412 (426)
T ss_dssp CTTSBCCEEEESSCTTTCSTTTCSSSTTCCEEEETTEEEE
T ss_pred CCCCcceEEEECCChHHhHHHHhCCCCCccEEEECCEEEE
Confidence 99999999999999998665543 457999999999874
No 35
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=99.96 E-value=3e-30 Score=270.55 Aligned_cols=166 Identities=16% Similarity=0.206 Sum_probs=96.2
Q ss_pred CceEeecCCCC-hhHHHHHHhCC--cEEEecCccccCChhHHH-----HhhC-hhhhhhhchHHHHHHHCCCeeeecCCC
Q 008993 380 RFRIEHAQHLA-SGTAARFGDQG--IVASMQPQHLLDDADSAR-----KKLG-VDRAERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 380 ~~~i~H~~~~~-~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~-----~~~g-~~~~~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
+.++.|+.... .+.++++++.| +.+.+||.+.....+... ..+. +.+......++++++++|+++++|||+
T Consensus 272 ~~hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~ 351 (467)
T 1xrt_A 272 HVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDH 351 (467)
T ss_dssp EEEESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHHHHHHTCSCEECCCB
T ss_pred CEEEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCC
Confidence 44555554321 33455666888 778889986543322111 0111 111112345678899999999999998
Q ss_pred CCCCC---ChHHHHHHHHcccCCCCCCCC-CCCCC-CCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC
Q 008993 451 PVADI---NPLCAIRTAMKRIPPGWDNAW-IPSER-ISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE 525 (547)
Q Consensus 451 ~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~-l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~ 525 (547)
+..+. +++.++...+..........+ ..+.+ +|++++|+++|.|||++||++ +|+|+|||.|||||+|.++..
T Consensus 352 ~~~~~~~~~~~~~~~~g~~g~e~~l~~~l~~~~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~ADlvvld~~~~~ 429 (467)
T 1xrt_A 352 APHQTFEKELVEFAMPGIIGLQTALPSALELYRKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPADITIFDPNKEW 429 (467)
T ss_dssp CCCCC-----------CCCCGGGHHHHHHHHHHTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBCCEEEEEEEEEE
T ss_pred CCCChhHhcccccCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCCCEEEEeCCCCE
Confidence 65432 222211110000000000000 01234 999999999999999999997 799999999999999987522
Q ss_pred --Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 526 --DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 526 --~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
+..++ ...+|..||++|++||+
T Consensus 430 ~i~~~~~~~~~~~~p~~g~~~~~~V~~viv~G~~v~~ 466 (467)
T 1xrt_A 430 ILNEETNLSKSRNTPLWGKVLKGKVIYTIKDGKMVYK 466 (467)
T ss_dssp ECSTTTCCSSCCCCTTTTCEEEEEEEEEEETTEEEEE
T ss_pred EEChHHccCcCCCCCccCCEEeEEEEEEEECCEEEec
Confidence 21111 14589999999999974
No 36
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.96 E-value=1.9e-28 Score=253.37 Aligned_cols=126 Identities=15% Similarity=0.074 Sum_probs=101.8
Q ss_pred hcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 373 TTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 373 ~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
..+..+.+..+.|+.++++++++++++.|+.+.+||.++. .++ ...++++.++++|+++++|||++.
T Consensus 291 ~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~~~~~~p~~~~--------~~~-----~~~~~l~~~~~~Gv~~~lgtD~~~ 357 (420)
T 2imr_A 291 ELGVLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNH--------HLE-----CGTFDWPAFAAAGVEVALGTDSVA 357 (420)
T ss_dssp HHTCGGGCCEEEECCSCCHHHHHHHHHHTCCEEECHHHHH--------HTT-----CCCCCHHHHHHTTCCEEECCCCHH
T ss_pred HcCCCCCCeEEEecCcCCHHHHHHHHHcCCeEEECHHHHH--------Hhc-----cCCCCHHHHHHCCCeEEEECCCCc
Confidence 3455566789999999999999999999999999997432 222 345789999999999999999854
Q ss_pred --CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCC
Q 008993 453 --ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSS 523 (547)
Q Consensus 453 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~ 523 (547)
...+++.+++.++.+ ..+++++++++++|.|||+++|+++++|+|++||+||| |+|.++
T Consensus 358 ~~~~~~~~~~~~~~~~~-----------~~~ls~~~al~~aT~n~A~~lgl~~~~GsL~~Gk~ADl-vvd~~~ 418 (420)
T 2imr_A 358 SGETLNVREEVTFARQL-----------YPGLDPRVLVRAAVKGGQRVVGGRTPFLRRGETWQEGF-RWELSR 418 (420)
T ss_dssp HHSCSCTHHHHHHHHHH-----------CTTSCHHHHHHHHHHHHHHHHC--CCCCSTTSBCCGGG-BGGGCC
T ss_pred cCCCCCHHHHHHHHHhc-----------CCCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCccCE-EEECCC
Confidence 346788888876532 23699999999999999999999988999999999999 777664
No 37
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.96 E-value=1.6e-28 Score=260.07 Aligned_cols=153 Identities=15% Similarity=0.145 Sum_probs=105.2
Q ss_pred CCceEeecCCCC----hhHHHHHHhCCcEEEecCccccCChhHH------------------------HHhhChhhhhhh
Q 008993 379 QRFRIEHAQHLA----SGTAARFGDQGIVASMQPQHLLDDADSA------------------------RKKLGVDRAERE 430 (547)
Q Consensus 379 ~~~~i~H~~~~~----~~~l~~~~~~g~~~~~~p~~~~~~~~~~------------------------~~~~g~~~~~~~ 430 (547)
.+.++.|..... ++.++++++.|+....++.......... ..++. . ..
T Consensus 268 ~~~hi~H~~~~~~~~~~d~I~~~~~~gv~~~~~~ptl~~t~~~~~~~~d~~~v~h~l~~~~~ed~~~~~~rlr---~-~~ 343 (569)
T 1e9y_B 268 RTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIR---P-QT 343 (569)
T ss_dssp CCEEETTTTSTTSCSTTTGGGGGGSTTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCC---H-HH
T ss_pred CCEEEEEcccCcccccHHHHHHHHHcCCeeEeeCCccccccchhhhhhchhhhhhhcCcccHHHHHHhhcchh---h-hH
Confidence 467888888765 6889999999985544332221111100 00111 1 23
Q ss_pred chHHHHHHHCCCeeeecCCCCCCCC------ChHH---HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 431 SYLFQSLLANNALLALGSDWPVADI------NPLC---AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 431 ~~~~~~l~~~Gv~~~~GTD~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
..+.+.+.++|+++++|||++..+. ++|. .+........ .....+.+++++++|+++|.|||+++|+
T Consensus 344 ~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~~~~~~~~~~~~G~l~----~~~~~~~~ls~~~al~~~T~npA~~lGl 419 (569)
T 1e9y_B 344 IAAEDTLHDMGAFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLK----EEKGDNDNFRIKRYLSKYTINPAIAHGI 419 (569)
T ss_dssp HHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHHHHHHHHHHHHCSCS----SCCSSSCHHHHHHHHGGGTHHHHHHTTC
T ss_pred HHHHHHHHhCCCEEEEeCCCCccCcccccccchhhHHHHhHhhccCcc----hhhccccCCCHHHHHHHHhHHHHHHcCC
Confidence 3456777889999999999876542 2332 2221110110 0112467899999999999999999999
Q ss_pred CCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 502 ENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 502 ~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
++++|+|++||.|||+|||.+++. .++..||++|++||
T Consensus 420 ~~~~GsIe~Gk~ADlvv~d~~~~~-------~~v~~v~~~G~iv~ 457 (569)
T 1e9y_B 420 SEYVGSVEVGKVADLVLWSPAFFG-------VKPNMIIKGGFIAL 457 (569)
T ss_dssp TTTSSSSCTTSBCCEEEECTTTTT-------TCCSEEEETTEEEE
T ss_pred CCCccCcCCCCCCCEEEECchhcC-------CCccEEEECCEEEE
Confidence 988999999999999999999862 38899999999986
No 38
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.96 E-value=3.4e-28 Score=248.71 Aligned_cols=137 Identities=19% Similarity=0.193 Sum_probs=101.0
Q ss_pred eEeecCC----CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC--eeeecCCCCCCC-
Q 008993 382 RIEHAQH----LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA--LLALGSDWPVAD- 454 (547)
Q Consensus 382 ~i~H~~~----~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv--~~~~GTD~~~~~- 454 (547)
.+.|+.. .++++++++++.|+.+..++.. .. .. ....+++.++++|+ ++++|||++...
T Consensus 217 ~i~H~~~~~~~~~~~~~~~~~~~g~~vl~~~~~----g~---------~~-~~~~~~~~~~~~g~~d~v~lgTD~p~~~~ 282 (386)
T 2vun_A 217 VVSHINGGPTAISVQEVDRIMDETDFAMEIVQC----GN---------PK-IADYVARRAAEKGQLGRVIFGNDAPSGTG 282 (386)
T ss_dssp EEETTTCSSSCCCHHHHHHHHHHCCCEEEEESS----SC---------HH-HHHHHHHHHHHHTCGGGEEEECCBSBTTB
T ss_pred EEEEccCCCCCCCHHHHHHHHHcCCeEEEeccC----Cc---------cc-ccHHHHHHHHHcCCCceeEEecCCCCCCC
Confidence 6899998 8899999999999876333220 00 11 33457899999999 999999986221
Q ss_pred CC----hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCC----
Q 008993 455 IN----PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWED---- 526 (547)
Q Consensus 455 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~---- 526 (547)
.. +..++... .+.++|++++++++|.|||+++|+ + +|+|++||.|||+++|.++..+
T Consensus 283 ~~~~g~~~~~~~~~-------------~~~~ls~~~~~~~~T~n~A~~lgl-~-~G~i~~G~~ADlvv~d~~~~~~~~~~ 347 (386)
T 2vun_A 283 LIPLGILRNMCQIA-------------SMSDIDPEVAVCMATGNSTAVYGL-N-TGVIAPGKEADLIIMDTPLGSVAEDA 347 (386)
T ss_dssp BCTTHHHHHHHHHH-------------HHSCCCHHHHHHHHTHHHHHHHTC-S-CSSCSTTSBCCEEEEECBTTCSCSSH
T ss_pred CCcchhHHHHHHHH-------------hhcCCCHHHHHHHHhHHHHHHcCC-C-ceeeCCCCeeCEEEECCCcccccchh
Confidence 12 33333322 124799999999999999999999 4 8999999999999999987321
Q ss_pred hhhhc---CCeEEEEEECcEEeCC
Q 008993 527 FAAEV---SASIEATYVSGVQAYP 547 (547)
Q Consensus 527 ~~~~~---~~~v~~v~v~G~~v~~ 547 (547)
..++. ..+|..||++|++||+
T Consensus 348 ~~~~~~~~~~~v~~v~v~G~~v~~ 371 (386)
T 2vun_A 348 MGAIAAGDIPGISVVLIDGEAVVT 371 (386)
T ss_dssp HHHHHHTCCCEEEEEEETTEEEES
T ss_pred HHHhhccCCCceeEEEECCEEEee
Confidence 22221 2489999999999874
No 39
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=99.96 E-value=1.3e-27 Score=249.84 Aligned_cols=160 Identities=21% Similarity=0.178 Sum_probs=105.2
Q ss_pred CCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHHh------hChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK------LGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~~------~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|...... +.++.+++.| ++..+||+++....+.+... .++-|.......+++.++.|+..++|||
T Consensus 256 ~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tD 335 (473)
T 3e74_A 256 CRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSD 335 (473)
T ss_dssp CCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCC
T ss_pred CcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeC
Confidence 4667777664322 3344555555 67888998877665554332 1222221223457778899999999999
Q ss_pred CCCCCCC---------------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcc
Q 008993 450 WPVADIN---------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIA 514 (547)
Q Consensus 450 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~A 514 (547)
+.....+ .-..+...+.. ...+.+++++++++++|.|||+++|+++ +|+|++|+.|
T Consensus 336 h~p~~~~~k~~~f~~~~~G~~g~e~~l~~~~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~~-~G~l~~G~~A 406 (473)
T 3e74_A 336 HSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDE--------AVQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDA 406 (473)
T ss_dssp BCCCCTTTTCSCTTTSCCCBCCGGGHHHHHHHH--------HTTTTCCCHHHHHHHHTHHHHHHTTCTT-SSCCSTTSBC
T ss_pred CCCCCHHHcccChhhcCCCcccHHhHHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcc
Confidence 7543321 00111111110 1245679999999999999999999985 7999999999
Q ss_pred cEEEEcCCC-CC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 515 DFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 515 Dlvv~d~d~-~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
||+++|.+. +. +..++. ..+|..||++|++||+
T Consensus 407 D~vv~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~v~G~~v~~ 454 (473)
T 3e74_A 407 DFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYD 454 (473)
T ss_dssp CEEEEESSCCEECCGGGCCSSSCCCTTTTCEESCEEEEEEETTEEEEE
T ss_pred CEEEEeCCCCEEECHHHccccCCCCCCCCCEEeeEEEEEEECCEEEEe
Confidence 999999762 22 222221 4579999999999984
No 40
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=99.96 E-value=1.4e-28 Score=256.59 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=101.5
Q ss_pred CceEeecCCCChhHHHHHHh------CCcEEEecCccccCChhHHHH------hhChhhhhhhchHHHHHHHCCCeeeec
Q 008993 380 RFRIEHAQHLASGTAARFGD------QGIVASMQPQHLLDDADSARK------KLGVDRAERESYLFQSLLANNALLALG 447 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~------~g~~~~~~p~~~~~~~~~~~~------~~g~~~~~~~~~~~~~l~~~Gv~~~~G 447 (547)
+.++.|+. +.+.++.+++ ..+.+.++|+....+.+.... ..++.+......++++++++|+++++|
T Consensus 237 ~v~i~H~~--~~~~~~~~~~~~a~~~~~v~~~~~~h~~~l~~~~~~~~g~~~~~~P~lr~~~~~~~l~~~l~~Gv~~~lg 314 (452)
T 2gwn_A 237 RLHILHLS--TEKELSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREALRAAVRNGRIDIIA 314 (452)
T ss_dssp CEEECCCC--CTGGGGGSCCSSCGGGCSEEEEEEHHHHHCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHSSSCEEE
T ss_pred CEEEEeCC--CHHHHHHHHHhhcccCCCeEEEEchHHhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHHHCCCceEEE
Confidence 66777877 4455554433 246777777765444333221 011111112445789999999999999
Q ss_pred CCCCCCCC-----ChHH--------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcc
Q 008993 448 SDWPVADI-----NPLC--------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIA 514 (547)
Q Consensus 448 TD~~~~~~-----~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~A 514 (547)
||++..+. +++. ++....... .....+++++++++++|.|||+++|++ ++|+|++||.|
T Consensus 315 TD~~~~~~~~k~~~~~~~~~g~~~~e~~~~~~~~-------~~~~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~G~~A 386 (452)
T 2gwn_A 315 TDHAPHLLREKEGSCLQAASGGPLVQHSLLALLE-------LCNQGIFSIEEIVSKTAHIPATLFAIE-KRGYIRPGYYA 386 (452)
T ss_dssp CCBCCCCHHHHCSCTTTSCCCCCCTTTHHHHHHH-------HHHTTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCTTSBC
T ss_pred eCCCCCChHHhcCChhhCCCCCccHHHHHHHHHH-------HHHcCCCCHHHHHHHHhHhHHHHcCCC-CCCcccCCCcC
Confidence 99864331 1111 111000000 002357999999999999999999998 48999999999
Q ss_pred cEEEEcCCCCC--Chhhhc-------------CCeEEEEEECcEEeC
Q 008993 515 DFVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAY 546 (547)
Q Consensus 515 Dlvv~d~d~~~--~~~~~~-------------~~~v~~v~v~G~~v~ 546 (547)
||+|+|.++.. +..++. ..+|..||++|++||
T Consensus 387 Dlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~ 433 (452)
T 2gwn_A 387 DLVLVDPSSPHTVSADNILSLCGWSPFEGFTFSHSVAYTFVNGCLAY 433 (452)
T ss_dssp CEEEEETTSCEECCTTTCCSTTCCCTTTTCEESCEEEEEEETTEEEE
T ss_pred CEEEEcCCCCeEECHHHccccCCCCCCCCcEEeeeEEEEEECCEEEE
Confidence 99999988532 222221 458999999999987
No 41
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=99.96 E-value=3.8e-28 Score=253.31 Aligned_cols=161 Identities=15% Similarity=0.144 Sum_probs=105.0
Q ss_pred CCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHHh------hChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 379 QRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARKK------LGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 379 ~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~~------~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
.+.++.|...... +.++.+++.| +.+.+||+++....+.+... .++-|......++.++++.|+..++|||
T Consensus 238 ~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD 317 (448)
T 3hm7_A 238 CPIHICHVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSD 317 (448)
T ss_dssp CCEEECCCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCC
T ss_pred CCEEEEeCCCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeC
Confidence 3667777653222 3344555555 68889998877665554331 1111221233457778888999999999
Q ss_pred CCCCCCC-h----H-----------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCc
Q 008993 450 WPVADIN-P----L-----------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKI 513 (547)
Q Consensus 450 ~~~~~~~-~----~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ 513 (547)
+...+.. . + ..+...+.. +....+++++++++++|.|||+++|+++++|+|++||.
T Consensus 318 ~~p~~~~~k~~~~~~~~~~G~~g~e~~l~~~~~~--------~~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~ 389 (448)
T 3hm7_A 318 HSPSLPQMKTGKTIFEVWGGIAGCQNTLAVMLTE--------GYHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAE 389 (448)
T ss_dssp BCCCCGGGGCCSSTTTSCCCBCCTTTHHHHHHHH--------TTTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSB
T ss_pred CCCCCHHHcccCCHhhCCCCCccHHHHHHHHHHH--------HHhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCc
Confidence 5432210 0 0 011111110 12466899999999999999999999877999999999
Q ss_pred ccEEEEcCC-CCC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 514 ADFVILSTS-SWE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 514 ADlvv~d~d-~~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
|||+++|.+ ++. +..++. ..+|..||++|++||+
T Consensus 390 Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~ 438 (448)
T 3hm7_A 390 ASFTLIDLNESYTLNASDLYYRHPISPYVGQRFRGKVKHTICQGKHVYQ 438 (448)
T ss_dssp CCEEEEEEEEEEECCGGGCCSSSCCCTTTTCEEEEEEEEEEETTEEEEE
T ss_pred CCEEEEeCCCCEEEChHhcccccCCCCCCCCEEEEEEEEEEECCEEEEE
Confidence 999999976 222 222221 3589999999999974
No 42
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=99.96 E-value=2.3e-28 Score=255.56 Aligned_cols=160 Identities=16% Similarity=0.163 Sum_probs=103.1
Q ss_pred CceEeecCCCCh-hHHHHHHhCCc--EEEecCccccCChhHHHH---------hhChhhhhhhchHHHHHHHCCCeeeec
Q 008993 380 RFRIEHAQHLAS-GTAARFGDQGI--VASMQPQHLLDDADSARK---------KLGVDRAERESYLFQSLLANNALLALG 447 (547)
Q Consensus 380 ~~~i~H~~~~~~-~~l~~~~~~g~--~~~~~p~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~l~~~Gv~~~~G 447 (547)
+.++.|...... +.++.+++.|+ ++.+||++...+.+.+.. ..++-|.......+.++++.|+..++|
T Consensus 234 ~~hi~H~s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~ 313 (461)
T 3sfw_A 234 QLYVVHVSCADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVG 313 (461)
T ss_dssp EEEECSCCSHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEEC
T ss_pred CEEEEecCcHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEE
Confidence 555555543221 55667777775 458899876544443321 112222222233467888899999999
Q ss_pred CCCCCCCCC--------hHH-----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccc
Q 008993 448 SDWPVADIN--------PLC-----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 508 (547)
Q Consensus 448 TD~~~~~~~--------~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI 508 (547)
||+...... ++. .+...+.. +....+++++++++++|.|||+++|+++++|+|
T Consensus 314 sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l 385 (461)
T 3sfw_A 314 SDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMTILFSE--------GVRKGKISLNQFVDITSTKVAKLFGMFPQKGTI 385 (461)
T ss_dssp CCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHH--------TTTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSC
T ss_pred CCCCCCCchhhhhcccCCHhhCCCCCccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHcCCCCCCCcc
Confidence 997654411 110 11111110 124556999999999999999999997779999
Q ss_pred cCCCcccEEEEcCCC-CC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 509 SPGKIADFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 509 ~~Gk~ADlvv~d~d~-~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
++||.|||+++|.+. +. +..++. ..+|..||++|++||+
T Consensus 386 ~~G~~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~~~v~~t~v~G~~v~~ 439 (461)
T 3sfw_A 386 AVGSDADIVLFDPTVQRTISVETHHMNVDYNPFEGMQVHGDVISVLSRGAFVVR 439 (461)
T ss_dssp STTSBCCEEEEEEEEEEECCTTTCCSSSSCCTTTTCEEEEEEEEEEETTEEEEE
T ss_pred CCCCcCCEEEEcCCCCEEEchHHcccccCCCCCCCCEecceEEEEEECCEEEEE
Confidence 999999999999772 22 222221 2489999999999973
No 43
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=99.96 E-value=2.9e-28 Score=252.57 Aligned_cols=159 Identities=20% Similarity=0.153 Sum_probs=104.6
Q ss_pred CCCceEeecCCCC-hhHHHHHHhCC--cEEEecCccccCChhHHHHhhCh-------hhhhhhchHHHHHHHCCCeeeec
Q 008993 378 DQRFRIEHAQHLA-SGTAARFGDQG--IVASMQPQHLLDDADSARKKLGV-------DRAERESYLFQSLLANNALLALG 447 (547)
Q Consensus 378 ~~~~~i~H~~~~~-~~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~l~~~Gv~~~~G 447 (547)
+.+.+++|+.... .+.++++++.| +.+.+||.++..+.+.... .+. .+.+.....+++++++|+.+++|
T Consensus 226 g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~-~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~lg 304 (426)
T 2z00_A 226 TPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRT-FDPLFKVAPPLRGEEDREALLEGLLDGTLDAIA 304 (426)
T ss_dssp CCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGG-CCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEEC
T ss_pred CCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhc-cCceEEEeCCCCCHHHHHHHHHHHhCCCcEEEe
Confidence 4578899998643 45677788877 4566799876544332211 111 11001112455667799999999
Q ss_pred CCC-CCCCC---ChHH-----------HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCC
Q 008993 448 SDW-PVADI---NPLC-----------AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 512 (547)
Q Consensus 448 TD~-~~~~~---~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk 512 (547)
||+ |.... +++. .+...... +....++|++++++++|.|||+++|++ +|+|+|||
T Consensus 305 sD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~ 374 (426)
T 2z00_A 305 TDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTE--------LHLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGA 374 (426)
T ss_dssp CCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHH--------THHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTS
T ss_pred cCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCC
Confidence 996 44321 1110 00000000 112346899999999999999999996 89999999
Q ss_pred cccEEEEcCCCCC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 513 IADFVILSTSSWE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 513 ~ADlvv~d~d~~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
.|||+|+|.+++. +..++. ..+|..||++|++||+
T Consensus 375 ~ADlvv~d~~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~t~v~G~~v~~ 423 (426)
T 2z00_A 375 EASLVLLSPKERPVDPSAFASKARYSPWAGWVLGGWPVLTLVAGRIVHE 423 (426)
T ss_dssp BCCEEEEECCCEECCGGGCSSSCCCCTTTTCEECCEEEEEEETTEEEEE
T ss_pred CCCEEEEeCCcEEEcHHHccccCCCCCcCCCEEEEEEEEEEECCEEEEe
Confidence 9999999997765 444442 3699999999999974
No 44
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=99.95 E-value=1.9e-27 Score=248.81 Aligned_cols=161 Identities=17% Similarity=0.129 Sum_probs=99.2
Q ss_pred CCceEeecCCCC-hhHHHHHHhCCcE--EEecCccccCChhHH-----HH----hhChhhhhhhchHHHHHHHCCCeeee
Q 008993 379 QRFRIEHAQHLA-SGTAARFGDQGIV--ASMQPQHLLDDADSA-----RK----KLGVDRAERESYLFQSLLANNALLAL 446 (547)
Q Consensus 379 ~~~~i~H~~~~~-~~~l~~~~~~g~~--~~~~p~~~~~~~~~~-----~~----~~g~~~~~~~~~~~~~l~~~Gv~~~~ 446 (547)
.+.++.|+.... .+.++.+++.|+. +.+||.+........ .. ..++.|......++..++++|+.+++
T Consensus 232 ~~~~~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~ 311 (458)
T 1gkp_A 232 ATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTV 311 (458)
T ss_dssp CEEEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEE
T ss_pred CCEEEEeCCCHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEE
Confidence 345565654311 2457788888864 468887432221111 00 01111111112345688999999999
Q ss_pred cCCCCCCCCC-------hHH---------H--HHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccc
Q 008993 447 GSDWPVADIN-------PLC---------A--IRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 508 (547)
Q Consensus 447 GTD~~~~~~~-------~~~---------~--~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI 508 (547)
|||+...+.+ ++. + +...+.+. ....++|++++++++|.|||++||+++++|+|
T Consensus 312 gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~--------~~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l 383 (458)
T 1gkp_A 312 GTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYG--------VSRGRLDIHRFVDAASTKAAKLFGLFPRKGTI 383 (458)
T ss_dssp ECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHH--------TTSSSCCHHHHHHHHTHHHHHHTTCTTTSSSC
T ss_pred ECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHH--------HHcCCCCHHHHHHHHhhCHHHHhCCCCCCCcC
Confidence 9997543311 111 1 11111110 12235999999999999999999998779999
Q ss_pred cCCCcccEEEEcCCCCC--Chhhh-------------cCCeEEEEEECcEEeCC
Q 008993 509 SPGKIADFVILSTSSWE--DFAAE-------------VSASIEATYVSGVQAYP 547 (547)
Q Consensus 509 ~~Gk~ADlvv~d~d~~~--~~~~~-------------~~~~v~~v~v~G~~v~~ 547 (547)
+|||+|||+|||.++.. +..++ ...+|..||++|++||+
T Consensus 384 ~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~~~v~~v~v~G~~v~~ 437 (458)
T 1gkp_A 384 AVGSDADLVVYDPQYRGTISVKTQHVNNDYNGFEGFEIDGRPSVVTVRGKVAVR 437 (458)
T ss_dssp CTTSBCCEEEEETTCCEECCGGGCCSSSSCCTTTTCEESCEEEEEEETTEEEEE
T ss_pred CCCCcCCEEEEeCCCCeEEchHHcccccCCCccCCCEEeeEEEEEEECCEEEEE
Confidence 99999999999988642 11111 13479999999999873
No 45
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=99.95 E-value=3.9e-27 Score=250.71 Aligned_cols=66 Identities=32% Similarity=0.568 Sum_probs=54.7
Q ss_pred cccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~ 115 (547)
+++++|+|++|+++++. ..++|+|+||||++|++.... +...++||++|++|+|||||+|+|+..+
T Consensus 2 ~m~~li~n~~vv~~~~~--~~~~v~I~~g~I~~Ig~~~~~----~~~~~viD~~g~~v~PGlID~H~H~~~~ 67 (559)
T 2fty_A 2 IYDLIIKNGIICTASDI--YAAEIAVNNGKVQLIAASIDP----SLGSEVIDAEGAFITPGGIDAHVHVDEP 67 (559)
T ss_dssp CEEEEEESCEEECSSCE--EECEEEEETTEEEEEESCCCG----GGEEEEEECTTCEEEECEEECCBCCCCT
T ss_pred CceEEEECcEEEcCCCc--eeeeEEEECCEEEEecCCCCC----CCCCeEEeCCCCEEEcCEEeeccCcCcc
Confidence 45789999999998753 677999999999999975321 1345899999999999999999998644
No 46
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=99.95 E-value=7e-27 Score=244.48 Aligned_cols=108 Identities=16% Similarity=0.095 Sum_probs=77.8
Q ss_pred chHHHHHHHCCCeeeecCCCCCCCCC--------hHH---------HH--HHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 431 SYLFQSLLANNALLALGSDWPVADIN--------PLC---------AI--RTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 431 ~~~~~~l~~~Gv~~~~GTD~~~~~~~--------~~~---------~~--~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
..+++.++++|+.+++|||+...+.. ++. ++ ...+.. ....++|++++++++
T Consensus 295 ~~~~~~~~~~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~~~---------~~~~~l~~~~~l~~~ 365 (457)
T 1nfg_A 295 HDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQG---------VNEGRISLTQFVELV 365 (457)
T ss_dssp HHHHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHHH---------HHTTSSCHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHHHHH---------HHcCCCCHHHHHHHH
Confidence 34678899999999999997543311 111 11 111100 123469999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCC--Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
|.|||++||+++++|+|+|||+|||+++|.++.. +..++. ..+|..||++|++||+
T Consensus 366 T~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~v~v~G~~v~~ 436 (457)
T 1nfg_A 366 ATRPAKVFGMFPQKGTIAVGSDADIVLWDPEAEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVD 436 (457)
T ss_dssp THHHHHHTTCTTTSSSCSTTSBCCEEEEEEEEEEECCGGGSCSSCSCCTTTTCEEEEEEEEEEETTEEEEE
T ss_pred hhhHHHHhCCCCCCcCcCCCCccCEEEEeCCCCEEecHHHccCCCCCCCccCCEecceEEEEEECCEEEEE
Confidence 9999999999877999999999999999987632 211211 2389999999999873
No 47
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=99.95 E-value=7.5e-27 Score=245.04 Aligned_cols=68 Identities=29% Similarity=0.484 Sum_probs=58.7
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~ 115 (547)
.+++++|+|++|+|+++.....++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+...
T Consensus 5 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~ 72 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-----HPARHAWDASGKIVAPGFIDVHGHDDLM 72 (480)
T ss_dssp CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-----SCEEEEEECTTSEEEECEEESSCCCTTH
T ss_pred ccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-----CCCCeEEECCCCEEccCEEecccccccc
Confidence 4568999999999998776678899999999999998642 3567899999999999999999997543
No 48
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=99.95 E-value=2.6e-27 Score=250.57 Aligned_cols=114 Identities=18% Similarity=0.164 Sum_probs=77.3
Q ss_pred chHHHHHHHCCCeeeecCCCCCCCCChHHHHHH--HHcccCCC---CCC-------CCCCCCCCCHHHHHHHHHHHHHHH
Q 008993 431 SYLFQSLLANNALLALGSDWPVADINPLCAIRT--AMKRIPPG---WDN-------AWIPSERISLTDALIAHTLSAARA 498 (547)
Q Consensus 431 ~~~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~~--~~~~~~~~---~~~-------~~~~~~~l~~~~al~~aT~n~A~~ 498 (547)
..+++++++.|+.+++|||+...+ ....+.. .+.....+ .+. .+....++|++++++++|.|||++
T Consensus 325 ~~~l~~~l~~G~~~~~gtD~~~~~--~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~ 402 (501)
T 2vm8_A 325 PDFLNSLLSCGDLQVTGSAHCTFN--TAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKV 402 (501)
T ss_dssp HHHHHHHHHHTSSCCCBCCBCCCC--HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHhcCceEEEEecCCCCC--hhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHH
Confidence 346778999999999999975432 1111100 00000000 000 012345799999999999999999
Q ss_pred cccCCCcccccCCCcccEEEEcCCCCC--Chhhhc-------------CCeEEEEEECcEEeC
Q 008993 499 CFLENDVGSLSPGKIADFVILSTSSWE--DFAAEV-------------SASIEATYVSGVQAY 546 (547)
Q Consensus 499 lgl~~~~GsI~~Gk~ADlvv~d~d~~~--~~~~~~-------------~~~v~~v~v~G~~v~ 546 (547)
+|+++++|+|++||.|||+|+|.++.. +..++. ..+|..||++|++||
T Consensus 403 lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~~s~~~~~~~~g~~~~~~v~~v~v~G~~v~ 465 (501)
T 2vm8_A 403 FNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNIFEGMECRGSPLVVISQGKIVL 465 (501)
T ss_dssp HTCTTTSSCCCTTSBCCEEEEEEEEEEECCTTTSSSSCSCCTTTTCEEEEEEEEEEETTEEEE
T ss_pred hCCCCCCCccCCCCcCCEEEEcCCCCeeeccccccccccCCCccCcEeCceEEEEEECCEEEE
Confidence 999877999999999999999988532 111110 347899999999986
No 49
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=99.95 E-value=5.6e-27 Score=242.35 Aligned_cols=155 Identities=17% Similarity=0.181 Sum_probs=101.0
Q ss_pred CceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHH------HhhChhhhhhhchHHHHHHHCCCeeeecCCC
Q 008993 380 RFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSAR------KKLGVDRAERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 380 ~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~------~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
+.++.|...... +.++..++.| +.+.+||++.....+.+. ...++.|.......+.+.++.|+..++|||+
T Consensus 225 ~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDh 304 (424)
T 3gri_A 225 HYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDH 304 (424)
T ss_dssp CEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCB
T ss_pred cEEEEeCCCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCC
Confidence 677777753222 2334445555 678889987654433221 1112222212234567788999999999997
Q ss_pred CCCCC-----------------C-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCC
Q 008993 451 PVADI-----------------N-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 512 (547)
Q Consensus 451 ~~~~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk 512 (547)
..... + .+..+... +..+.+++++++++++|.|||+++|+ + +|+|++|+
T Consensus 305 ap~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~-----------~~~~~~~~~~~~~~~~t~~~a~~~g~-~-~g~l~~G~ 371 (424)
T 3gri_A 305 APHARDEKAQPMEKAPFGIVGSETAFPLLYTH-----------FVKNGDWTLQQLVDYLTIKPCETFNL-E-YGTLKENG 371 (424)
T ss_dssp CCCCHHHHTSCTTTSCCCCCCTTTHHHHHHHH-----------HTTTSSCCHHHHHHHHTHHHHHHTTC-S-CSCCCTTS
T ss_pred CCCCHHHccCCHhHCCCCCccccccHHHHHHH-----------HHHcCCCCHHHHHHHHhHHHHHHhCC-C-CCcccCCC
Confidence 43211 1 11111110 12456799999999999999999999 3 89999999
Q ss_pred cccEEEEcCCC-CC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 513 IADFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 513 ~ADlvv~d~d~-~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
.|||++||.+. +. +..++. ..+|..||++|++||+
T Consensus 372 ~Ad~~~~d~~~~~~~~~~~~~~~~~~sp~~g~~~~g~v~~t~~~G~~v~~ 421 (424)
T 3gri_A 372 YADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFE 421 (424)
T ss_dssp BCCEEEEESSCCEECCGGGCSSSCCCCTTTTCEESCEEEEEEETTEEEEE
T ss_pred cCCEEEEcCCCCEEEchhhcccccCCCCcCCCEEeeeEEEEEECCEEEEe
Confidence 99999999883 33 323332 3589999999999984
No 50
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=99.95 E-value=1.6e-26 Score=239.42 Aligned_cols=155 Identities=20% Similarity=0.197 Sum_probs=100.2
Q ss_pred CceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHH------HhhChhhhhhhchHHHHHHHCCCeeeecCCC
Q 008993 380 RFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSAR------KKLGVDRAERESYLFQSLLANNALLALGSDW 450 (547)
Q Consensus 380 ~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~------~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~ 450 (547)
+.++.|+..... +.++.+++.| +.+.+||++.....+.+. +..++.|......++.++++.|+..++|||+
T Consensus 226 ~~~i~H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh 305 (428)
T 3mpg_A 226 HYHVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDH 305 (428)
T ss_dssp CEEECSCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCB
T ss_pred CEEEEeCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCC
Confidence 667777764322 3345555666 566778876543332211 1112222223334577888889999999997
Q ss_pred CCCCCC------------------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCC
Q 008993 451 PVADIN------------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 512 (547)
Q Consensus 451 ~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk 512 (547)
...+.+ .+..+.. . +....+++++++++++|.|||+++|++ +|+|++|+
T Consensus 306 ~p~~~~~k~~~~~~~p~g~~g~e~~~~~~~~---~--------~~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~ 372 (428)
T 3mpg_A 306 APHTAEEKAQGIERAPFGITGFETAFPLLYT---N--------LVKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGR 372 (428)
T ss_dssp CCCCTTGGGSCTTTSCSCCCCTTTHHHHHHH---H--------TTTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTS
T ss_pred CCCCHHHcccCHhhCCCCceehhhHHHHHHH---H--------HHHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCC
Confidence 544321 1111111 1 123457999999999999999999996 79999999
Q ss_pred cccEEEEcCCC-CC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 513 IADFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 513 ~ADlvv~d~d~-~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
.|||+++|.+. +. +..++. ..+|..||++|++||+
T Consensus 373 ~Ad~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~g~v~~t~v~G~~v~~ 422 (428)
T 3mpg_A 373 TADITIIDLEQEEEIDPTTFLSKGKNTPFAGWKCQGWPVMTIVGGKIAWQ 422 (428)
T ss_dssp BCCEEEEESSCCEECCGGGCSSSCCCCSCTTCEECCEEEEEEETTEEEEE
T ss_pred cCCEEEEcCCCCEEEchhhccccCCCCCcCCCEEeeEEEEEEECCEEEEe
Confidence 99999999774 21 222221 3479999999999973
No 51
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.95 E-value=2.1e-26 Score=237.85 Aligned_cols=140 Identities=16% Similarity=0.161 Sum_probs=97.5
Q ss_pred ceEeecCCCCh-----------hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCC-CeeeecC
Q 008993 381 FRIEHAQHLAS-----------GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGS 448 (547)
Q Consensus 381 ~~i~H~~~~~~-----------~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~G-v~~~~GT 448 (547)
..+.|+....+ +++.++++.|+.+.++|.... ....+++.+.++| +++++||
T Consensus 227 ~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~~~----------------~~~~~~~~~~~~G~~~~~lgt 290 (417)
T 2ogj_A 227 DVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGGAS----------------FSFKVAEAAIARGLLPFSIST 290 (417)
T ss_dssp CEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCSSS----------------CCHHHHHHHHHTTCCCSBCCB
T ss_pred CEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCCcc----------------ccchHHHHHHHcCCCceEEEc
Confidence 67888876433 467778888988888876332 1224688999999 9999999
Q ss_pred CCCCCC-CC-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC-
Q 008993 449 DWPVAD-IN-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE- 525 (547)
Q Consensus 449 D~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~- 525 (547)
|++ .+ .. +...+...+.+. .+.+++++++++++|.|||++||+++ +|+|+|||.|||+|+|.+...
T Consensus 291 D~~-~~~~~g~~~~l~~~~~~~---------~~~~l~~~~al~~~T~n~A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~ 359 (417)
T 2ogj_A 291 DLH-GHSMNFPVWDLATTMSKL---------LSVDMPFENVVEAVTRNPASVIRLDM-ENRLDVGQRADFTVFDLVDADL 359 (417)
T ss_dssp CBS-TTTTTTTCCCHHHHHHHH---------HHTTCCHHHHHHTTTHHHHHHTTCCC-SSTTSTTSBCEEEEEEEEEEEE
T ss_pred CCC-CCccCCChhHHHHHHHHH---------HHcCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCCcccEEEEecccCCc
Confidence 976 43 10 011122211111 12368999999999999999999998 899999999999999976322
Q ss_pred Chhhhc--------CCeEEEEEECcEEeCC
Q 008993 526 DFAAEV--------SASIEATYVSGVQAYP 547 (547)
Q Consensus 526 ~~~~~~--------~~~v~~v~v~G~~v~~ 547 (547)
+..+.. ..+|..||++|++||+
T Consensus 360 ~~~~~~g~~~~~~~~~~v~~t~v~G~~v~~ 389 (417)
T 2ogj_A 360 EATDSNGDVSRLKRLFEPRYAVIGAEAIAA 389 (417)
T ss_dssp EEECTTSCEEEEEEEEEEEEEEETTEEEEC
T ss_pred eecCCCCceEecccccceEEEEECCEEEEe
Confidence 211111 2389999999999974
No 52
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=99.95 E-value=4.4e-26 Score=238.93 Aligned_cols=158 Identities=16% Similarity=0.105 Sum_probs=101.7
Q ss_pred CCceEeecCCCCh-hHHHHHHhCC--cEEEecCccccCChhHHHH----------hhChhhhhhhchHHHHHHHCCCeee
Q 008993 379 QRFRIEHAQHLAS-GTAARFGDQG--IVASMQPQHLLDDADSARK----------KLGVDRAERESYLFQSLLANNALLA 445 (547)
Q Consensus 379 ~~~~i~H~~~~~~-~~l~~~~~~g--~~~~~~p~~~~~~~~~~~~----------~~g~~~~~~~~~~~~~l~~~Gv~~~ 445 (547)
.+.++.|...... +.++..++.| ++..+||+++..+.+.+.. ..++-|.......+...++.|...+
T Consensus 230 ~~lhi~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~ 309 (490)
T 3dc8_A 230 CPVYIVHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQV 309 (490)
T ss_dssp CCEEESSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCC
T ss_pred CcEEEEeCCCHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceE
Confidence 3667777653222 2234445555 6777888876544433221 1222222223345677788899999
Q ss_pred ecCCCCCCCCC---------------------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCC
Q 008993 446 LGSDWPVADIN---------------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEND 504 (547)
Q Consensus 446 ~GTD~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~ 504 (547)
++||+.....+ .+..++.. .....+++++++++++|.|||+++|++++
T Consensus 310 i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~-----------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~ 378 (490)
T 3dc8_A 310 VATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTY-----------GVATGRITMNEFVAVTSTNIAKILNIYPK 378 (490)
T ss_dssp CBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHH-----------HTTTTSSCHHHHHHHHTHHHHHHTTCTTT
T ss_pred EECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHHHH-----------HHHcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 99997543211 01111111 12466799999999999999999999777
Q ss_pred cccccCCCcccEEEEcCCC-CC-Chhhhc-------------CCeEEEEEECcEEeCC
Q 008993 505 VGSLSPGKIADFVILSTSS-WE-DFAAEV-------------SASIEATYVSGVQAYP 547 (547)
Q Consensus 505 ~GsI~~Gk~ADlvv~d~d~-~~-~~~~~~-------------~~~v~~v~v~G~~v~~ 547 (547)
+|+|++|+.|||+|||.+. +. +..++. ..+|..||++|++||+
T Consensus 379 ~G~l~~G~~ADlvv~d~~~~~~i~~~~~~s~~~~sp~~g~~~~g~v~~t~~~G~~v~~ 436 (490)
T 3dc8_A 379 KGAILVGADADLVVWDPKRSKTISAKTQQSAIDYNVFEGKTVTGLPRFTLTRGVVSIE 436 (490)
T ss_dssp SSCCSTTSBCCEEEEEEEEEEECCTTTCSSSSSCCTTTTCEEEEEEEEEEETTEEEEE
T ss_pred CCccCCCCcCCEEEEecCcceEechhhccccCCCCcccCcEEeeEEEEEEECCEEEEE
Confidence 9999999999999999762 11 111111 3589999999999973
No 53
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.94 E-value=1.8e-25 Score=227.81 Aligned_cols=126 Identities=16% Similarity=0.078 Sum_probs=92.2
Q ss_pred hHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCC-CeeeecCCCCCC------CCChHHHHHHH
Q 008993 392 GTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN-ALLALGSDWPVA------DINPLCAIRTA 464 (547)
Q Consensus 392 ~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~G-v~~~~GTD~~~~------~~~~~~~~~~~ 464 (547)
++++++++.|+.+.++|.+... ...+++.++++| ++.++|||++.. .......+...
T Consensus 230 ~~~~~~~~~g~~~~~~p~~~~~----------------~~~~~~~~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~ 293 (379)
T 2ics_A 230 DFAWQAYNKGVVFDIGHGTDSF----------------NFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKL 293 (379)
T ss_dssp HHHHHHHHTTCEEECCCTTTSC----------------CHHHHHHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHHHHcCCEEEecCCCCCc----------------CHHHHHHHHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHH
Confidence 7788888999999999874421 123577899999 889999997521 11222222221
Q ss_pred HcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCC----Ch-hhhcCC----eE
Q 008993 465 MKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWE----DF-AAEVSA----SI 535 (547)
Q Consensus 465 ~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~----~~-~~~~~~----~v 535 (547)
. +.++|++++++++|.|||++||+++ +|+|+|||+|||+|+|.+... +. ...... +|
T Consensus 294 ~-------------~~~ls~~~~~~~~T~n~A~~lgl~~-~G~l~~G~~ADlvv~d~~~~~~~~~~~~g~~~~~~~~~~v 359 (379)
T 2ics_A 294 R-------------VVGYDWPEIIEKVTKAPAENFHLTQ-KGTLEIGKDADLTIFTIQAEEKTLTDSNGLTRVAKEQIRP 359 (379)
T ss_dssp H-------------HHTCCHHHHHHTTTHHHHHHTTCTT-SSSCCTTSBCCEEEEEEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred H-------------HcCCCHHHHHHHHHHHHHHHhCCCC-CcCCCCCCccCEEEEecccccceeecCCCCEEEeeeeeee
Confidence 1 1368999999999999999999988 899999999999999864332 11 111133 89
Q ss_pred EEEEECcEEeCC
Q 008993 536 EATYVSGVQAYP 547 (547)
Q Consensus 536 ~~v~v~G~~v~~ 547 (547)
..||++|++||+
T Consensus 360 ~~t~v~G~~v~~ 371 (379)
T 2ics_A 360 IKTIIGGQIYDN 371 (379)
T ss_dssp EEEEETTEEEEC
T ss_pred EEEEECCEEEec
Confidence 999999999985
No 54
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.94 E-value=3.5e-26 Score=241.39 Aligned_cols=399 Identities=19% Similarity=0.188 Sum_probs=201.8
Q ss_pred ccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccc---cc
Q 008993 45 ADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQM---AR 121 (547)
Q Consensus 45 ~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~---~~ 121 (547)
++++|+|++|+++.+.....++|+|+||||++|++... +...++||++|++|+|||||+|+|+..+.... ..
T Consensus 21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-----~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~ 95 (496)
T 1rk6_A 21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-----SSARRRIDVAGKVVSPGFIDSHTHDDNYLLKHRDMTP 95 (496)
T ss_dssp BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-----SCBSCEEECTTCEEEECEEESSCCCTTHHHHCTTCHH
T ss_pred ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-----CCCCeEEeCCCCEEecCEeeeeecCCccccccHHHHH
Confidence 47899999999987655577899999999999997532 24568999999999999999999997653211 01
Q ss_pred cccCCCCCHHHHHHHHHHHHHcCCCCCeEEEe----CCCCC--CcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHH
Q 008993 122 VKLRGVSHKDEFVRRVKEAVKNSKKGSWILGG----GWNND--LWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVA 195 (547)
Q Consensus 122 ~~~~g~~t~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~--~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~ 195 (547)
....|+| +++.+. .+... .+....+ +.. +...... .....+. ..
T Consensus 96 ~~~~G~T-------------------t~~~~~~g~~~~p~~~~~l~~~i~----~~~--~~~~~~~---~~~~~~~--e~ 145 (496)
T 1rk6_A 96 KISQGVT-------------------TVVTGNCGISLAPLAHANPPAPLD----LLD--EGGSFRF---ARFSDYL--EA 145 (496)
T ss_dssp HHTTTEE-------------------EEEESCTTCCSCSEECSSCCTTGG----GGC--SSSCCEE---SSHHHHH--HH
T ss_pred HHcCCeE-------------------EEEeCCCCCCCCCCChHHHHHhhc----ccC--cccccCc---cCHHHHH--HH
Confidence 1112222 122110 01000 0000000 000 0000000 0000000 11
Q ss_pred HHHcCCCCCCCCCCCCeEeeCCCCCcCEEEh-hhHHHH-hcccC-CCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCC
Q 008993 196 LQLVGITNLSEDPNGGTIMKTSSGEPTGLLI-DAAMKL-ILPWI-PEVSVDERREALLRASNLALSRGVTTVVDFGRYYP 272 (547)
Q Consensus 196 l~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 272 (547)
++..+.... + ..+. ...... +.... .....++ ...++..++.+.+.|+..+.....+.+
T Consensus 146 ~~~~~~~~~--------~---------~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~ 207 (496)
T 1rk6_A 146 LRAAPPAVN--------A---------ACMVGHSTLRAAVMPDLRREATADE-IQAMQALADDALASGAIGISTGAFYPP 207 (496)
T ss_dssp HHHSCCSSE--------E---------EEEEEHHHHHHHHCSCCSSCCCHHH-HHHHHHHHHHHHHHTCCEEEEETTSGG
T ss_pred HhccCCccc--------e---------EEecccccceeeeccccccCCCHHH-HHHHHHHHHHHHHcCCcEEeeccccCC
Confidence 111111000 0 0000 000000 00000 1122232 345566677777788887765433221
Q ss_pred CcccccchhHHHHHHHHHhhCCCCeeEEEEccCc----cchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhh
Q 008993 273 GESVQLSWEDFADVYQWASYSEKMKIRVCLFFPL----ETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFH 348 (547)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 348 (547)
+ ...+.+++.+..+.+.+.+ ..+.+|..... +...+..+.....+..
T Consensus 208 ~--~~~~~~el~~~~~~a~~~g-~~v~~H~~~~~~~~~~~l~~~~~~a~~~g~~-------------------------- 258 (496)
T 1rk6_A 208 A--AHASTEEIIEVCRPLITHG-GVYATHMRDEGEHIVQALEETFRIGRELDVP-------------------------- 258 (496)
T ss_dssp G--TTCCHHHHHHHHTHHHHHT-CEEEEECSCSSTTHHHHHHHHHHHHHHHTSC--------------------------
T ss_pred C--CCCCHHHHHHHHHHHHHcC-CEEEEEeCCCcccHHHHHHHHHHHHHHcCCe--------------------------
Confidence 1 1234456677776666554 34544443222 1223333333333321
Q ss_pred ceeE-Eecc-----cHHHHHHHHHHHHHHHhcCCCCCCceE------eecCCCChhHHHHHHhCC-cEEEecCccccCCh
Q 008993 349 EVAI-HAIG-----DRANDLVLDMYKSVVVTTGKRDQRFRI------EHAQHLASGTAARFGDQG-IVASMQPQHLLDDA 415 (547)
Q Consensus 349 ~v~~-H~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i------~H~~~~~~~~l~~~~~~g-~~~~~~p~~~~~~~ 415 (547)
+++ |... .......++.+++.... + .... .|+.+++ ++++++.+ +.+.+||.......
T Consensus 259 -v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~-g----~v~~~~~~~~~~~~~~~---~~~l~~~~~~~v~~~p~~~~l~~ 329 (496)
T 1rk6_A 259 -VVISHHKVMGKLNFGRSKETLALIEAAMAS-Q----DVSLDAYPYVAGSTMLK---QDRVLLAGRTLITWCKPYPELSG 329 (496)
T ss_dssp -EEECSCCCCSGGGTTTHHHHHHHHHHHHHH-S----CEEEEECSCSCEEEECC---CCTTTTSSCEEEEEESSCGGGTT
T ss_pred -EEEEEEeccCCcchhhHHHHHHHHHHHHHc-C----CeEEEEeccCCCCCccc---HHHhcCccceEEeccCCCccccc
Confidence 333 4321 11234445555544332 1 2222 2444433 44566664 77888884321100
Q ss_pred hHHHHhhChhhhhhhchHH---HHHHHCCC-----------------eeeecCCCCCCCC--ChHHH--HHHHHcccCCC
Q 008993 416 DSARKKLGVDRAERESYLF---QSLLANNA-----------------LLALGSDWPVADI--NPLCA--IRTAMKRIPPG 471 (547)
Q Consensus 416 ~~~~~~~g~~~~~~~~~~~---~~l~~~Gv-----------------~~~~GTD~~~~~~--~~~~~--~~~~~~~~~~~ 471 (547)
....+ .+. . ++..+. .+++++|+ ++++|||+...+. .+... +...+..
T Consensus 330 ~~l~~-~~~--~-~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~iGTD~~~~~~~~~~~~~~~~~~~l~~---- 401 (496)
T 1rk6_A 330 RDLEE-IAA--E-RGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPHDERPHPRLWGTFPRVLGH---- 401 (496)
T ss_dssp CBHHH-HHH--H-TTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTTCSSCCTHHHHHHHHHHCC----
T ss_pred CcHHH-HHH--H-cCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEEecCCCCCCCCCCchhhccHHHHHHH----
Confidence 00000 000 0 111222 23445565 6899999864431 22211 1111111
Q ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhh-----cCCeEEEEEECcEEe
Q 008993 472 WDNAWIP-SERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAE-----VSASIEATYVSGVQA 545 (547)
Q Consensus 472 ~~~~~~~-~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~-----~~~~v~~v~v~G~~v 545 (547)
+.. ...+|++++++++|.|||++||+++ +|+|++||.|||++||.++..+...+ ...+|..||++|++|
T Consensus 402 ----~v~~~~~l~~~~~l~~~T~~~A~~lgl~~-~G~i~~G~~ADlv~~d~~~~~~~~~~~~~~~~~~~v~~v~v~G~~v 476 (496)
T 1rk6_A 402 ----YSRDLGLFPLETAVWKMTGLTAAKFGLAE-RGQVQPGYYADLVVFDPATVADSATFEHPTERAAGIHSVYVNGAAV 476 (496)
T ss_dssp ----CCCCTCSSCHHHHHHTTTHHHHHHHTCTT-CSSCCTTSBCCEEEECTTTCBCCCCSSSTTCCCBSEEEEEETTEEE
T ss_pred ----HHhhcCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcccEEEEcCcccccccccccccccCCCceEEEECCEEE
Confidence 112 3459999999999999999999976 89999999999999999875433322 125799999999998
Q ss_pred CC
Q 008993 546 YP 547 (547)
Q Consensus 546 ~~ 547 (547)
|+
T Consensus 477 ~~ 478 (496)
T 1rk6_A 477 WE 478 (496)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 55
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.94 E-value=4.7e-26 Score=249.05 Aligned_cols=106 Identities=18% Similarity=0.124 Sum_probs=77.2
Q ss_pred HHHHHHHCCCeeeecCCCCCCCCC--h----HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcc
Q 008993 433 LFQSLLANNALLALGSDWPVADIN--P----LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVG 506 (547)
Q Consensus 433 ~~~~l~~~Gv~~~~GTD~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~G 506 (547)
....+.+.|+..+++||+...... . +........... ..........+++++++|+++|+|||++||+++++|
T Consensus 617 ~~~ll~dlGvi~~isSD~~p~~~~~e~~~~~~~~a~~~~~~~g-~~~~e~~~~~~Lsl~eAIr~aTiNPAraLGLddr~G 695 (840)
T 4gy7_A 617 AEDVLNDIGAISIISSDSQAMGRVGEVISRTWQTADKMKAQTG-PLKCDSSDNDNFRIRRYIAKYTINPAIANGFSQYVG 695 (840)
T ss_dssp HHHHHHHTTSSCEEECCBTTTBCGGGHHHHHHHHHHHHHHHHC-SCTTSCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSS
T ss_pred HHHHHHhCCCeEEEeccccccccccccchhhhcccccchhhcc-cchhhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 455677899999999997554321 1 111111111110 011223345679999999999999999999999999
Q ss_pred cccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 507 SLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 507 sI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
+|+|||.|||||||...|. .++..|+++|.+||
T Consensus 696 SIEpGK~ADLVLfDPa~FG-------vKPe~Vik~G~Iv~ 728 (840)
T 4gy7_A 696 SVEVGKLADLVMWKPSFFG-------TKPEMVIKGGMVAW 728 (840)
T ss_dssp SSCTTSBCCEEEECGGGTT-------TCCSEEEETTEEEE
T ss_pred ccCCCCcceEEEECchHcC-------CCCeEEEECCEEEE
Confidence 9999999999999977654 38999999999987
No 56
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.93 E-value=1e-25 Score=241.33 Aligned_cols=107 Identities=16% Similarity=0.090 Sum_probs=79.8
Q ss_pred hHHHHHHHCCCeeeecCCCCCCCC--C----hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCc
Q 008993 432 YLFQSLLANNALLALGSDWPVADI--N----PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDV 505 (547)
Q Consensus 432 ~~~~~l~~~Gv~~~~GTD~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~ 505 (547)
.....+.+.|....+++|+..... . .+.........+... ........+++++++|+++|+|||++||+++++
T Consensus 342 ~~~~~l~~~G~~~~i~sD~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~gls~~eal~~aTiNPAralGL~d~i 420 (566)
T 4ep8_C 342 AAEDVLHDLGAFSLTSSDSQAMGRVGEVILRTWQVAHRMKVQRGAL-AEETGDNDNFRVKRYIAKYTINPALTHGIAHEV 420 (566)
T ss_dssp HHHHHHHHHTSSCEECCCTTSSSCTTCHHHHHHHHHHHHHHHHCSC-TTCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTS
T ss_pred HHHHHHHhCCCcceEeecccccccccccccccCCCCchHHHHHHHH-HHhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 345667788999999999765432 1 122222222111111 112234668999999999999999999999999
Q ss_pred ccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 506 GSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 506 GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
|||+|||+|||||||.++|.. ++.+|+++|.+||
T Consensus 421 GSIevGK~ADLVL~Dp~~f~v-------kP~~v~~~G~iv~ 454 (566)
T 4ep8_C 421 GSIEVGKLADLVVWSPAFFGV-------KPATVIKGGMIAI 454 (566)
T ss_dssp SSSCTTSBCCEEEECGGGTTT-------SCSEEEETTEEEE
T ss_pred cCCCCCCCCCEEEECccccCC-------CeeEEeeCCEEEE
Confidence 999999999999999998754 8999999999997
No 57
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.93 E-value=4.9e-25 Score=235.74 Aligned_cols=129 Identities=18% Similarity=0.108 Sum_probs=88.7
Q ss_pred eEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC-----CC
Q 008993 382 RIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD-----IN 456 (547)
Q Consensus 382 ~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~-----~~ 456 (547)
...|+....++.+++++ .|..+.+. .+...+.. ...+.++.+...|++++++||...+. .+
T Consensus 239 ~~~H~~~~~eea~e~l~-~G~~i~i~-gs~~~~~~------------~l~~~i~~~~~~g~~v~lgTD~~~p~~~~~~g~ 304 (608)
T 3nqb_A 239 SSDHELVSGEDLMAKLR-AGLTIELR-GSHDHLLP------------EFVAALNTLGHLPQTVTLCTDDVFPDDLLQGGG 304 (608)
T ss_dssp CEECCCCSHHHHHHHHH-TTCEEEEE-SSSGGGHH------------HHHHHHHHHTSCCTTEEEECBSCCHHHHHHTCS
T ss_pred CeeeccCCHHHHHHHHH-CCCEEEEe-ccccccHH------------HHHHHHHhHhhcCceEEEecCCCCCcchhhhcc
Confidence 34899988877777775 68887766 32221110 11111222234899999999963210 12
Q ss_pred hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEE
Q 008993 457 PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIE 536 (547)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~ 536 (547)
....+..++ +.+++++++++++|.|||+.+|+++ +|+|+|||+|||+++|. ++ ..++.
T Consensus 305 l~~~v~~~~-------------~~Gls~~eal~~aT~n~A~~lgl~~-~G~i~~G~~ADlvv~d~--l~------~~~v~ 362 (608)
T 3nqb_A 305 LDDVVRRLV-------------RYGLKPEWALRAATLNAAQRLGRSD-LGLIAAGRRADIVVFED--LN------GFSAR 362 (608)
T ss_dssp HHHHHHHHH-------------HTTCCHHHHHHHHTHHHHHHHTCTT-SSCCSTTSBCCEEEESC--TT------TCCEE
T ss_pred hHHHHHHHH-------------HcCCCHHHHHHHHHHHHHHHcCCCC-CcCcCCCCCccEEEECC--CC------CCcce
Confidence 222333322 2379999999999999999999965 89999999999999995 11 23899
Q ss_pred EEEECcEEeC
Q 008993 537 ATYVSGVQAY 546 (547)
Q Consensus 537 ~v~v~G~~v~ 546 (547)
.||++|++|+
T Consensus 363 ~v~~~G~~v~ 372 (608)
T 3nqb_A 363 HVLASGRAVA 372 (608)
T ss_dssp EEEETTEEEE
T ss_pred EEEECCEEEE
Confidence 9999999986
No 58
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.93 E-value=4.8e-25 Score=226.06 Aligned_cols=134 Identities=21% Similarity=0.074 Sum_probs=96.0
Q ss_pred eEeecCCCChhHHHHHHhC-Cc-EEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC--CCh
Q 008993 382 RIEHAQHLASGTAARFGDQ-GI-VASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INP 457 (547)
Q Consensus 382 ~i~H~~~~~~~~l~~~~~~-g~-~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~--~~~ 457 (547)
.+.|+.++++++++.+++. +. .+..+|.+..... +.... ....+++.+.++| .+.+ +|+..++ .++
T Consensus 252 ~~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~--~~~~~~~~~~~~g-~~~~-~d~~~~g~~~~l 321 (396)
T 2vhl_A 252 LIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKG------LKDGV--YEFGGQSVTVRGR-TALL-SDGTLAGSILKM 321 (396)
T ss_dssp EECSSSSSCHHHHHHHHHHHCTTSEEEECCBCTTTT------SCSEE--EEETTEEEEEETT-EEEC-TTSCBCSBCCCH
T ss_pred EcCCccccCHHHHHHHHhhcCCccEEEECcChhhcC------CCCce--EEECCeEEEEECC-EEEe-CCCcccccccCH
Confidence 6778889999998887776 64 5677777543110 00000 0001223345677 6666 6654333 467
Q ss_pred HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEE
Q 008993 458 LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEA 537 (547)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~ 537 (547)
+.++..++. ..++|++++++++|.|||++||+++++|+|++||+|||+++|.+. +|..
T Consensus 322 ~~~l~~~~~------------~~~~~~~~~l~~aT~~~A~~lgl~~~~G~i~~G~~ADlvv~d~~~----------~v~~ 379 (396)
T 2vhl_A 322 NEGARHMRE------------FTNCSWTDIANITSENAAKQLGIFDRKGSVTVGKDADLVIVSSDC----------EVIL 379 (396)
T ss_dssp HHHHHHHHH------------HHCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEECTTC----------CEEE
T ss_pred HHHHHHHHH------------hcCCCHHHHHHHHHHHHHHHhCCcCCCceeCCCCcCCEEEECCCC----------cEEE
Confidence 777766553 135899999999999999999999889999999999999999873 8999
Q ss_pred EEECcEEeCC
Q 008993 538 TYVSGVQAYP 547 (547)
Q Consensus 538 v~v~G~~v~~ 547 (547)
||++|++||+
T Consensus 380 v~~~G~~v~~ 389 (396)
T 2vhl_A 380 TICRGNIAFI 389 (396)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEe
Confidence 9999999873
No 59
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.93 E-value=2.1e-24 Score=216.17 Aligned_cols=370 Identities=15% Similarity=0.127 Sum_probs=200.4
Q ss_pred EEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccccccccccCC
Q 008993 47 LVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGLQMARVKLRG 126 (547)
Q Consensus 47 ~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~g 126 (547)
++|+|++|+++++. ...++|+|+||||.+|++.... +...++||++|++|+|||||+|+|+..+. ++.+
T Consensus 5 ~~i~n~~i~~~~~~-~~~~~i~I~dG~I~~i~~~~~~----~~~~~viD~~G~~v~PGfID~HvHg~~G~------~~~d 73 (381)
T 3iv8_A 5 YALTNCKIYTGNDV-LVKHAVIINGDKIEAVCPIESL----PSEMNVVDLNGANLSPGFIDLQLNGCGGV------MFND 73 (381)
T ss_dssp EEEEEEEEECSSCE-ESSEEEEEETTEEEEEEEGGGS----CTTCEEEEEEEEEEEECEEEEEECEETTE------ETTT
T ss_pred EEEEccEEEcCCCe-EeccEEEEECCEEEEEeCCCCC----CCCCeEEECCCCEEccCeEeeeecccCCC------CCCC
Confidence 68999999998753 3556999999999999986542 35678999999999999999999987542 2333
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCeEEEeCCCCCCcCCCCCChhhhhhhCCCCeEEEEecCCchhhhcHHHHHHcCCCCCCC
Q 008993 127 VSHKDEFVRRVKEAVKNSKKGSWILGGGWNNDLWGGDLPMASWIDDITPHNPVWLSRMDGHMGLANSVALQLVGITNLSE 206 (547)
Q Consensus 127 ~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 206 (547)
..+.+++....+.+.+ .+.++++.-.-. .| ...+.+ .+.+.+.....+ .+
T Consensus 74 ~~~~e~l~~~~~a~~~-~GvTt~l~t~~T--------~~-~e~l~~----------------al~~~~~~~~~~----~~ 123 (381)
T 3iv8_A 74 EITAETIDTMHKANLK-SGCTSFLPTLIT--------SS-DENMRQ----------------AIAAAREYQAKY----PN 123 (381)
T ss_dssp SCSHHHHHHHHHHHHH-TTEEEEEEEEES--------CC-HHHHHH----------------HHHHHHHHHHHC----SS
T ss_pred CCCHHHHHHHHHHHHh-CCccccccccCC--------CC-HHHHHH----------------HHHHHHHHHhcC----CC
Confidence 3466666655555544 222222221110 00 011110 011111111111 01
Q ss_pred CCCCCeEeeCCCCCcCEEEhhhHH--HHhcccCCCCCHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHH
Q 008993 207 DPNGGTIMKTSSGEPTGLLIDAAM--KLILPWIPEVSVDERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFA 284 (547)
Q Consensus 207 ~~~g~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 284 (547)
...|-.++ |.|..... ..-..++..++.+.+++. .+. ..++..+.-.+- . .. .
T Consensus 124 ~ilGiHlE--------GPfis~~~~Ga~~~~~i~~p~~~~~~~~----~~~--~~~i~~vTlAPE--------~--~~-~ 178 (381)
T 3iv8_A 124 QSLGLHLE--------GPYLNVMKKGIHSVDFIRPSDDTMIDTI----CAN--SDVIAKVTLAPE--------N--NK-P 178 (381)
T ss_dssp SBCCEEEE--------CSSCCGGGCTTSCTTTCCCCCHHHHHHH----HHT--TTSEEEEEECCT--------T--SC-H
T ss_pred ceeEeecc--------CcccCHhhcCCCCHHHcCCCCHHHHHHH----Hhc--cCCeEEEEECCC--------C--Cc-H
Confidence 11221111 11111100 001123445665554443 221 223433333321 1 12 4
Q ss_pred HHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcchhhhhceeEEecccHHHHHHH
Q 008993 285 DVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVL 364 (547)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~H~~~~~~~~~~~ 364 (547)
+..+++.+.| +++.......++++..+.+.......+..+ .++ -.+|-....-+..
T Consensus 179 ~~i~~l~~~g---i~vs~GHs~A~~e~~~~a~~~Ga~~~THlf--NaM-----------------~~~~hR~PG~vga-- 234 (381)
T 3iv8_A 179 EHIEKLVKAG---IVVSIGHTNATYSEARKSFESGITFATHLF--NAM-----------------TPMVGREPGVVGA-- 234 (381)
T ss_dssp HHHHHHHHTT---CEEEECSBCCCHHHHHHHHHTTCCEESSTT--SSB-----------------CCCBTTBCHHHHH--
T ss_pred HHHHHHHHCC---CEEEecCCCCCHHHHHHHHHcCCCEeeeCC--CCC-----------------CCccCCCCchHHH--
Confidence 6777777763 677776666777777776665443221111 000 1222111111111
Q ss_pred HHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHh---CCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCC
Q 008993 365 DMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD---QGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANN 441 (547)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~---~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~G 441 (547)
++.. + .-..-.|.++.|+++..++.+.+ .++.+........ ........+|.... ..+.|
T Consensus 235 -~l~~-----~-~~~~elI~DG~Hv~p~~~~~~~~~~g~~~~lvTDam~a~-G~~dg~y~lgg~~v---------~v~~g 297 (381)
T 3iv8_A 235 -IYDT-----P-EVYAGIIADGFHVDYANIRIAHKIKGEKLVLVTDATAPA-GAEMDYFIFVGKKV---------YYRDG 297 (381)
T ss_dssp -HHHC-----T-TCEEEEECSSSSSCHHHHHHHHHHHGGGEEEECCBCTTT-TSCCSEEESSSCEE---------EEETT
T ss_pred -HhcC-----C-CcEEEEEcCCccCCHHHHHHHHHhcCCEEEEEeCccccc-CCCCCeeecCCeEE---------EEECC
Confidence 1110 0 01123677999999988775432 2333332222111 00000001111100 11223
Q ss_pred CeeeecCCCC-C-CCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEE
Q 008993 442 ALLALGSDWP-V-ADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVIL 519 (547)
Q Consensus 442 v~~~~GTD~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~ 519 (547)
...+ .|+. . +..++...++.++. ..++++++|++++|.|||+++|+++++|+|++||.|||+++
T Consensus 298 -~~~l-~~g~lAGs~l~l~~~v~~~v~------------~~g~~~~~al~~aT~~pA~~lg~~~~~G~i~~G~~ADlvvl 363 (381)
T 3iv8_A 298 -KCVD-ENGTLGGSALTMIEAVQNTVE------------HVGIALDEALRMATLYPAKAIGVDEKLGRIKKGMIANLTVF 363 (381)
T ss_dssp -EEEC-TTCCBCSBCCCHHHHHHHHHH------------TTCCCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBCCEEEE
T ss_pred -EEEc-CCCCccChhhhHHHHHHHHHH------------hhCCCHHHHHHHHHHHHHHHhCCCCCCceECCCCcCCEEEE
Confidence 2222 2332 2 23678888888663 34799999999999999999999998899999999999999
Q ss_pred cCCCCCChhhhcCCeEEEEEECcEEeCC
Q 008993 520 STSSWEDFAAEVSASIEATYVSGVQAYP 547 (547)
Q Consensus 520 d~d~~~~~~~~~~~~v~~v~v~G~~v~~ 547 (547)
|.|. +|..||++|++||+
T Consensus 364 d~~~----------~v~~t~~~G~~v~~ 381 (381)
T 3iv8_A 364 DRDF----------NVKATVVNGQYEQN 381 (381)
T ss_dssp CTTC----------CEEEEEETTEEEEC
T ss_pred CCCC----------CEEEEEECCEEeeC
Confidence 9775 89999999999985
No 60
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=99.92 E-value=1.2e-24 Score=230.58 Aligned_cols=67 Identities=25% Similarity=0.517 Sum_probs=54.8
Q ss_pred CcccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccc
Q 008993 43 LEADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPG 115 (547)
Q Consensus 43 ~~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~ 115 (547)
.+.+++|+|++|+++++ ...++|+|+||||++|++.... +...++||++|++|+|||||+|+|+..+
T Consensus 6 ~~~~~lI~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~----~~~~~vIDa~G~~v~PGlID~H~H~~~~ 72 (521)
T 2ftw_A 6 QTGTILIKNGTVVNDDR--YFKSDVLVENGIIKEISKNIEP----KEGIKVVDATDKLLLPGGIDTHTHFQLP 72 (521)
T ss_dssp -CCCEEEESCEEECSSC--EEECEEEEETTEEEEEESCCCC----CSSCCEEECTTCEEEECEEEEEECTTCE
T ss_pred ccCCEEEECcEEECCCC--ceeeeEEEECCEEEEecCCCCC----CCCCeEEECCCCEEecCEEeeecccCcC
Confidence 34689999999999865 3567999999999999975321 2356899999999999999999998543
No 61
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=99.92 E-value=4.4e-24 Score=227.21 Aligned_cols=113 Identities=20% Similarity=0.218 Sum_probs=75.1
Q ss_pred HHHHHHHCCCeeeecCCCCCCCCChHHHHH--HHHcccCCC---CCC-------CCCCCCCCCHHHHHHHHHHHHHHHcc
Q 008993 433 LFQSLLANNALLALGSDWPVADINPLCAIR--TAMKRIPPG---WDN-------AWIPSERISLTDALIAHTLSAARACF 500 (547)
Q Consensus 433 ~~~~l~~~Gv~~~~GTD~~~~~~~~~~~~~--~~~~~~~~~---~~~-------~~~~~~~l~~~~al~~aT~n~A~~lg 500 (547)
.+.++++.|+..++|||+.... ...... ..+.+...+ .+. ......+++++++++++|.|||+++|
T Consensus 332 ~l~~~l~~g~~~~~gtD~~~~~--~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~lg 409 (541)
T 2vr2_A 332 FLMNLLANDDLTTTGTDNCTFN--TCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFN 409 (541)
T ss_dssp HHHHHHHTTSSCCCBCCBCCCC--HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHHTT
T ss_pred HHHHHHhcCCeEEEEeCCCCCC--hHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhC
Confidence 3667889999999999975322 111100 000000000 000 01134569999999999999999999
Q ss_pred cCCCcccccCCCcccEEEEcCCCCC--Chhh------------h-cCCeEEEEEECcEEeCC
Q 008993 501 LENDVGSLSPGKIADFVILSTSSWE--DFAA------------E-VSASIEATYVSGVQAYP 547 (547)
Q Consensus 501 l~~~~GsI~~Gk~ADlvv~d~d~~~--~~~~------------~-~~~~v~~v~v~G~~v~~ 547 (547)
+++++|+|++||+|||+|||.++.. +... . ...+|..||++|++||+
T Consensus 410 l~~~~G~i~~G~~ADlvv~d~~~~~~~~~~~~~~~~~~~p~~g~~~~g~v~~v~v~G~~v~~ 471 (541)
T 2vr2_A 410 LYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYE 471 (541)
T ss_dssp CTTTSSCCSTTSBCCEEEEEEEEEEECCTTTCSSSCSCCTTTTCEEEEEEEEEEETTEEEEE
T ss_pred CCCCCCccCCCCCCCEEEEcCCcCeEeCHHHhhcccCCCccCCCEEeeeEEEEEECCEEEEE
Confidence 9877999999999999999977432 1111 1 13368999999999873
No 62
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.91 E-value=5.1e-23 Score=210.55 Aligned_cols=92 Identities=23% Similarity=0.232 Sum_probs=71.3
Q ss_pred hHHHHHHHCCCe---eeecCCCCCCCC-----------------ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHH
Q 008993 432 YLFQSLLANNAL---LALGSDWPVADI-----------------NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAH 491 (547)
Q Consensus 432 ~~~~~l~~~Gv~---~~~GTD~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~a 491 (547)
.+++.++++|+. +.++||+..... .....++.++ ...+++++++++++
T Consensus 265 ~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 332 (390)
T 1onw_A 265 EGIARAVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLV------------KDYDFSISDALRPL 332 (390)
T ss_dssp HHHHHHHHTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHHH------------HHHCCCHHHHHGGG
T ss_pred HHHHHHHHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHHHHHHHHH------------HHcCCCHHHHHHHH
Confidence 468899999985 799999843210 1222222221 13468999999999
Q ss_pred HHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCeEEEEEECcEEeC
Q 008993 492 TLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSASIEATYVSGVQAY 546 (547)
Q Consensus 492 T~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~v~~v~v~G~~v~ 546 (547)
|.|||+++|+++ +|+|+||++|||+++|.+. +|..||++|++||
T Consensus 333 t~npA~~~gl~~-~G~i~~G~~ADlvv~d~~~----------~v~~v~~~G~~v~ 376 (390)
T 1onw_A 333 TSSVAGFLNLTG-KGEILPGNDADLLVMTPEL----------RIEQVYARGKLMV 376 (390)
T ss_dssp THHHHHHTTCTT-CSSCCTTSBCCEEEECTTC----------CEEEEEETTEEEE
T ss_pred hHHHHHHhCCCC-CcccCCCCcCCEEEEcCCC----------cEEEEEECCEEEE
Confidence 999999999964 7999999999999999772 7889999999886
No 63
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.84 E-value=2.4e-20 Score=189.24 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=60.6
Q ss_pred CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCCcccEEEEcCCCCCChhhhcCCe
Q 008993 455 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGKIADFVILSTSSWEDFAAEVSAS 534 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk~ADlvv~d~d~~~~~~~~~~~~ 534 (547)
.+++..+..++. ..+++++++++++|.|||++||++++ |+|++||+|||+++|.+. +
T Consensus 305 ~~l~~~l~~~~~------------~~~~~~~~~l~~~T~~~A~~lgl~~~-G~i~~G~~ADlv~~d~~~----------~ 361 (376)
T 1o12_A 305 LFFSQAVKNFRK------------FTGCSITELAKVSSYNSCVELGLDDR-GRIAEGTRADLVLLDEDL----------N 361 (376)
T ss_dssp CCHHHHHHHHHH------------HHCCCHHHHHHHHTHHHHHHTTCTTS-SCCSTTSBCCEEEECTTC----------C
T ss_pred cCHHHHHHHHHH------------HcCCCHHHHHHHHHHHHHHHhCCCCC-ccCCCCCcCCEEEECCCC----------C
Confidence 577888776553 23689999999999999999999985 999999999999999773 8
Q ss_pred EEEEEECcEEeCC
Q 008993 535 IEATYVSGVQAYP 547 (547)
Q Consensus 535 v~~v~v~G~~v~~ 547 (547)
|..||++|++||+
T Consensus 362 v~~v~~~G~~v~~ 374 (376)
T 1o12_A 362 VVMTIKEGEVVFR 374 (376)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEECCEEEee
Confidence 9999999999873
No 64
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.59 E-value=3.1e-15 Score=115.47 Aligned_cols=73 Identities=33% Similarity=0.467 Sum_probs=61.0
Q ss_pred cccEEEEcCEEEeCCCCCceeeEEEEECCEEEEeeChhHHHhhhcCCCeEEeCCCCeeeccccccccccccccc
Q 008993 44 EADLVVTNGVIFTGDDSLLFADSMAIKNGRIVSVGNYSAVQQLAADGTNVLNLQGKVVVPGFIDSHVHFIPGGL 117 (547)
Q Consensus 44 ~~~~li~n~~v~~~~~~~~~~~~I~I~~GrI~~ig~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 117 (547)
+.+++|+|++|+++++.....++|+|+||||++|++....... +..+++||++|++|+|||||+|+|+..+..
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~p~~ 75 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSA-TEKTKKIDLKRKRAIPGLNDSHIHVIRGLE 75 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGC-CTTCEEEECTTCEEEECCCCTTEEEECCCC
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhccc-CCCCEEEECCCCEEeeCeEeeeeCCCCccc
Confidence 4688999999999977655678999999999999987653221 346789999999999999999999987754
No 65
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=99.33 E-value=4.9e-11 Score=118.54 Aligned_cols=124 Identities=12% Similarity=0.097 Sum_probs=80.5
Q ss_pred CCceEeecCCCChhHHHHHHh-CCcEEEecCccccCChhHHHH--------hhChhhhhhhchHHHHHHHCCCee-eecC
Q 008993 379 QRFRIEHAQHLASGTAARFGD-QGIVASMQPQHLLDDADSARK--------KLGVDRAERESYLFQSLLANNALL-ALGS 448 (547)
Q Consensus 379 ~~~~i~H~~~~~~~~l~~~~~-~g~~~~~~p~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~l~~~Gv~~-~~GT 448 (547)
.+.++.|.+ +.+.++.+++ ..++..+||+++..+.+.+.. ..++-|.+.....+++.+..|... .++|
T Consensus 183 ~~lhi~HvS--t~~~v~~I~~A~~VtaEv~phhL~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaT 260 (359)
T 3pnu_A 183 LKIVMEHIT--TKTLCELLKDYENLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGS 260 (359)
T ss_dssp SCEEECSCC--SHHHHHHHHHCTTEEEEECSGGGTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECC
T ss_pred CcEEEEecC--cHHHHHHHHhcCCceEEEechhhEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEec
Confidence 477777776 4566666655 589999999999877665532 122222222223466777889888 7999
Q ss_pred CCCCCCCC----------------hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccccCCC
Q 008993 449 DWPVADIN----------------PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSLSPGK 512 (547)
Q Consensus 449 D~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI~~Gk 512 (547)
|+..-..+ .+.-++..+ +.++++++++++.|.|||+++|++.+. |
T Consensus 261 DHaPh~~~eK~~~~g~~Gi~~~~~~L~l~~~~~-------------~~~~~l~~lv~~~s~nPAki~gL~~~~-----G- 321 (359)
T 3pnu_A 261 DSAPHPKDTKECCGCAAGVFSAPVILPVLAELF-------------KQNSSEENLQKFLSDNTCKIYDLKFKE-----D- 321 (359)
T ss_dssp CBCCCBC------CCCSCBCCGGGHHHHHHHHH-------------HHHSCHHHHHHHHTHHHHHHHTCCCSS-----C-
T ss_pred CCCCCCHHHhCCCCCCCChhhHHHHHHHHHHHH-------------hhcCCHHHHHHHHHHhHHHHhCCCCCC-----C-
Confidence 96432211 011111111 123589999999999999999997543 4
Q ss_pred cccEEEEcCCCCC
Q 008993 513 IADFVILSTSSWE 525 (547)
Q Consensus 513 ~ADlvv~d~d~~~ 525 (547)
|||+||| .++.
T Consensus 322 -Adlvl~d-~~~~ 332 (359)
T 3pnu_A 322 -KILTLEE-KEWQ 332 (359)
T ss_dssp -CEEEEEC-CCEE
T ss_pred -CeEEEEe-cCEE
Confidence 9999999 5544
No 66
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=99.06 E-value=3.4e-09 Score=105.67 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=71.6
Q ss_pred CCCceEeecCCCChhHHHHHHh--CCcEEEecCccccCChhHHHH--------hhChhhhhhhchHHHHHHHCCCee-ee
Q 008993 378 DQRFRIEHAQHLASGTAARFGD--QGIVASMQPQHLLDDADSARK--------KLGVDRAERESYLFQSLLANNALL-AL 446 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~l~~~~~--~g~~~~~~p~~~~~~~~~~~~--------~~g~~~~~~~~~~~~~l~~~Gv~~-~~ 446 (547)
+.+.++.|.. +.+.++.+++ .+++..+||++...+.+.+.. ..++-|.......+.+.+..|... .+
T Consensus 170 ~~~~hi~Hvs--t~~~~~~i~~ak~~Vt~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i 247 (347)
T 2z26_A 170 ALKVVFEHIT--TKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFL 247 (347)
T ss_dssp TCCEEECSCC--SHHHHHHHHTSCTTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEE
T ss_pred CCcEEEEECC--cHHHHHHHHHhCCCceEeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEE
Confidence 4467777765 4566666554 458999999998766554432 111211112223466777888777 89
Q ss_pred cCCCCCCC------------C---C-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcccc
Q 008993 447 GSDWPVAD------------I---N-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVGSL 508 (547)
Q Consensus 447 GTD~~~~~------------~---~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI 508 (547)
+||+..-. . . .+.-++..+ +.++++++++++.|.|||+++|+..++|+|
T Consensus 248 ~SDhaP~~~~~K~~~~g~~Gi~~~e~~l~l~~~~~-------------~~~~sl~~~v~~~s~nPAki~gl~~~kG~i 312 (347)
T 2z26_A 248 GTDSAPHARHRKESSCGCAGCFNAPTALGSYATVF-------------EEMNALQHFEAFCSVNGPQFYGLPVNDTFI 312 (347)
T ss_dssp CCCBCCCCHHHHSSSSBCCCCCCTTTHHHHHHHHH-------------HHTTCGGGHHHHHHTHHHHHHTCCCCCCEE
T ss_pred ecCCCCCCHHHhcCCCCCCCcCcHHHHHHHHHHHh-------------hcCCCHHHHHHHHhHhHHHHhCCCCCCCeE
Confidence 99973211 1 1 111111111 125799999999999999999997557875
No 67
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=98.80 E-value=8.3e-08 Score=96.17 Aligned_cols=228 Identities=13% Similarity=0.056 Sum_probs=139.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEeCc-----cCCCCcccccchhHHHHHHHHHhhCC--CCeeEEEEccC----ccc
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVDFG-----RYYPGESVQLSWEDFADVYQWASYSE--KMKIRVCLFFP----LET 308 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~ 308 (547)
.+.++++.....+++.+.+.|++++.-.. ....+.+.+...+...+.++++.++. ++..++...+. .+.
T Consensus 108 ~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r~~~~~~ 187 (371)
T 2pgf_A 108 HDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDTGHEAAN 187 (371)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEESSTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecCCCCHHH
Confidence 57888999999999999999999873321 01122222223333455666655555 66665554432 233
Q ss_pred hhhHHHHHHhcCCCCCCcEEEceEEEEEcCCc-Ccchhhhhc-------eeEEeccc--HHH-HHHHHHHHHHHHhcCCC
Q 008993 309 WSSLADLINKTGHVLSDWVYLGGVKAFADGSL-GSNSALFHE-------VAIHAIGD--RAN-DLVLDMYKSVVVTTGKR 377 (547)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~-------v~~H~~~~--~~~-~~~~~~~~~~~~~~~~~ 377 (547)
..+..+..... ... ..|+.+..+... ......+.. +.+|+... ... ..+.++++. .
T Consensus 188 ~~~~~~~a~~~----~~~--vvg~dl~g~e~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~-------l 254 (371)
T 2pgf_A 188 IKASADFCLKH----KAD--FVGFDHGGHEVDLKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQV-------L 254 (371)
T ss_dssp HHHHHHHHHHT----TTT--EEEEEEEESCCCGGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHT-------S
T ss_pred HHHHHHHHHhC----CCC--EEEEecCCCcccHHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhc-------c
Confidence 33344433331 111 334444443322 111111111 88887532 111 222233321 1
Q ss_pred CCCceEeecCCCChhH--HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC-C
Q 008993 378 DQRFRIEHAQHLASGT--AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-D 454 (547)
Q Consensus 378 ~~~~~i~H~~~~~~~~--l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~ 454 (547)
+ ..++.|+.++++++ ++++++.|+.+.+||.++.. ++.... ....|++.|+++|+++++|||.+.+ +
T Consensus 255 g-~~ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~--------l~~~~~-~~~~pi~~ll~~Gv~V~lgTD~~~~~~ 324 (371)
T 2pgf_A 255 K-VERIGHGIRVAESQELIDMVKEKNILLEVCPISNVL--------LKNAKS-MDTHPIRQLYDAGVKVSVNSDDPGMFL 324 (371)
T ss_dssp C-CSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHH--------TTSSSC-GGGCTHHHHHHTTCEEEECCBCHHHHT
T ss_pred C-CCEEecchhccccHHHHHHHHHcCCeEEECcchhHH--------hCCCCc-cccChHHHHHHCCCeEEEeCCCCcccC
Confidence 2 33899999998776 99999999999999997641 111000 2335899999999999999998753 4
Q ss_pred CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 455 INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
.+++.++..+... .+++++++ +.+|.|++++..+++
T Consensus 325 ~~l~~e~~~a~~~------------~~l~~~~l-~~lt~ns~~asf~~~ 360 (371)
T 2pgf_A 325 TNINDDYEELYTH------------LNFTLEDF-MKMNEWALEKSFMDS 360 (371)
T ss_dssp CCHHHHHHHHHHH------------HCCCHHHH-HHHHHHHHHHCCSCH
T ss_pred CCHHHHHHHHHHH------------hCCCHHHH-HHHHHHHHHHHcCCH
Confidence 5888888877643 36899995 888999999998864
No 68
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=98.64 E-value=4.5e-07 Score=89.97 Aligned_cols=231 Identities=12% Similarity=0.062 Sum_probs=137.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCcc--CC--------------CCcccccchhHHHHHHHHHhhCCCCeeEEEEcc
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGR--YY--------------PGESVQLSWEDFADVYQWASYSEKMKIRVCLFF 304 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (547)
+.++++....+.++.+.+.|+..+.-.-. .+ .+.+.+.-++...+.+++..++.++.+++.+.+
T Consensus 72 ~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~ 151 (367)
T 3iar_A 72 CREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCC 151 (367)
T ss_dssp CHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 57888999999999999999987654311 00 022333333345555666655556677665543
Q ss_pred CccchhhHHHHHHhcCCCCCCcEEEceEEEEEcCCcCcc------hhhhhc-------eeEEecccHHHHHHHHHHHHHH
Q 008993 305 PLETWSSLADLINKTGHVLSDWVYLGGVKAFADGSLGSN------SALFHE-------VAIHAIGDRANDLVLDMYKSVV 371 (547)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~ 371 (547)
.-...++..+.++......... .-|+.+..+...... ...+.. +.+|+........+.++++.+
T Consensus 152 ~R~~~~~a~e~~~la~~~~~~~--vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~~l- 228 (367)
T 3iar_A 152 MRHQPNWSPKVVELCKKYQQQT--VVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDIL- 228 (367)
T ss_dssp ETTCGGGHHHHHHHHHHTTTTT--EEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHTS-
T ss_pred CCCCCHHHHHHHHHHHhhCCCC--EEEEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHHcc-
Confidence 2221122222222211111111 335555444332221 111111 888875332233333333211
Q ss_pred HhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCC
Q 008993 372 VTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSD 449 (547)
Q Consensus 372 ~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD 449 (547)
+ ..+|.|+..+. ++.++++++.++.+.+||.++. .++.... ....|++.|+++|++++++||
T Consensus 229 ------g-~~RIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~--------~l~~~~~-~~~hPi~~ll~~Gv~v~l~TD 292 (367)
T 3iar_A 229 ------K-TERLGHGYHTLEDQALYNRLRQENMHFEICPWSSY--------LTGAWKP-DTEHAVIRLKNDQANYSLNTD 292 (367)
T ss_dssp ------C-CSEEEECGGGGGCHHHHHHHHHTTCEEEECHHHHH--------HTSSSCT-TSCCHHHHHHHTTCCEEECCB
T ss_pred ------C-CceeeeeeeecCCHHHHHHHHhCCcEEEECHHHHH--------HhCCCCC-cccChHHHHHHCCCEEEECCC
Confidence 1 34899999885 4789999999999999999764 1211111 234689999999999999999
Q ss_pred CCCC-CCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 450 WPVA-DINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 450 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
.|.. +.++..++..+.. ..++++++ +...|.|++++..+++
T Consensus 293 dp~~~~~~l~~e~~~a~~------------~~glt~~e-l~~l~~nsi~~sf~~~ 334 (367)
T 3iar_A 293 DPLIFKSTLDTDYQMTKR------------DMGFTEEE-FKRLNINAAKSSFLPE 334 (367)
T ss_dssp SHHHHTCCHHHHHHHHHH------------HHCCCHHH-HHHHHHHHHHTSSSCH
T ss_pred CccccCCCHHHHHHHHHH------------HcCCCHHH-HHHHHHHHHHHhCCCH
Confidence 8753 4567777776543 23689988 7777899999887753
No 69
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=98.63 E-value=3.4e-07 Score=90.13 Aligned_cols=230 Identities=11% Similarity=0.054 Sum_probs=137.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCcc----CCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccC-ccchhhHHHH
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGR----YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFP-LETWSSLADL 315 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 315 (547)
+.++++....+.++.+.+.|+..+.-.-. ...+.+.+.-++...+.+++..++.++..++...+. ....+...+.
T Consensus 75 ~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~~ 154 (343)
T 3rys_A 75 TEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFLRDMSEDSALEV 154 (343)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCCCHHHHHHH
Confidence 78889999999999999999987754211 011222222233344445455555556666655432 2222222222
Q ss_pred HHhcCCCCCCcEEEceEEEEEcCCc---Ccchhhhhc-------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEee
Q 008993 316 INKTGHVLSDWVYLGGVKAFADGSL---GSNSALFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH 385 (547)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H 385 (547)
++....+ .+ ..-|+.+..+..- ......+.. +.+|+........+.++++.+ + ..+|.|
T Consensus 155 l~~a~~~-~~--~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~l-------g-~~rIgH 223 (343)
T 3rys_A 155 LDQLLAM-HA--PIAGIGLDSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVL-------H-VERIDH 223 (343)
T ss_dssp HHHHHHT-TC--CCCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTS-------C-CSEEEE
T ss_pred HHHHHhC-CC--CEEEEecCCcccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcC-------C-cceeee
Confidence 2221111 11 1345554443221 111111111 888875332233333333211 1 347999
Q ss_pred cCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC-CCChHHHHH
Q 008993 386 AQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAIR 462 (547)
Q Consensus 386 ~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~~~~~~~ 462 (547)
+.++. ++.++++++.++.+.+||.++.. ++.... ....|++.|+++|+++++|||.|.. +.++..++.
T Consensus 224 gv~l~~d~~l~~~l~~~~i~le~cP~SN~~--------l~~~~~-~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~E~~ 294 (343)
T 3rys_A 224 GIRCMEDTDVVQRLVAEQVPLTVCPLSNVR--------LRAVDK-LADHPLPEMLAIGLNVCVNSDDPAYFGGYVDDNFE 294 (343)
T ss_dssp CGGGGGCHHHHHHHHHHTCCEEECHHHHHH--------TTSSSC-GGGCSHHHHHHTTCCEEECCBSTTTTTCCHHHHHH
T ss_pred eeeecCChHHHHHHHhcCCCeeEchhHHHH--------hCCCCC-cccchHHHHHHCCCeEEEeCCCccccCCCHHHHHH
Confidence 99887 47899999999999999997641 221000 2335899999999999999998865 357888888
Q ss_pred HHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 463 TAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
.+... .++++++ +...+.|+++...+++
T Consensus 295 ~a~~~------------~~l~~~~-l~~l~~nsi~~sf~~~ 322 (343)
T 3rys_A 295 QLVKV------------LEFSVPE-QATLAANSIRSSFASD 322 (343)
T ss_dssp HHHHH------------HCCCHHH-HHHHHHHHHHHSSSCH
T ss_pred HHHHH------------cCCCHHH-HHHHHHHHHHHHCCCH
Confidence 76643 3689988 5777899999888754
No 70
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=98.57 E-value=1e-07 Score=93.30 Aligned_cols=230 Identities=11% Similarity=0.022 Sum_probs=136.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEeCc----cCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEcc-CccchhhHHH
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVDFG----RYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFF-PLETWSSLAD 314 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 314 (547)
.+.++++....+.++.+.+.|+..+.-.- ....+.+.+.-++...+.+++..++.++..++...+ .....+...+
T Consensus 71 ~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~~~~~a~~ 150 (326)
T 3pao_A 71 RTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQK 150 (326)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEETTSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeCCCCCHHHHHH
Confidence 36788999999999999999998763211 001122222233345556666665555555554433 2222333333
Q ss_pred HHHhcCCCCCCcEEEceEEEEEcCC---cCcchhhhhc-------eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEe
Q 008993 315 LINKTGHVLSDWVYLGGVKAFADGS---LGSNSALFHE-------VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIE 384 (547)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~-------v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (547)
.++...... + ..-|+.+..+.. .......+.. +.+|+........+.++++.+ + ..++.
T Consensus 151 ~~~~a~~~~-~--~vvG~dL~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~l-------g-~~rig 219 (326)
T 3pao_A 151 TLDQALPFR-D--AFIAVGLDSSEVGHPPSKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLL-------K-VERID 219 (326)
T ss_dssp HHHHHGGGG-G--GCSEEEEESCCTTCCGGGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTT-------C-CSSEE
T ss_pred HHHHHhhcc-c--cceeeCCCCCCCCCCHHHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcC-------C-Cceee
Confidence 333222221 1 234555544332 1112222211 888875332223333333221 1 33689
Q ss_pred ecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCC-CCChHHHH
Q 008993 385 HAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVA-DINPLCAI 461 (547)
Q Consensus 385 H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~-~~~~~~~~ 461 (547)
|+..+. +++++++++.++.+.+||.++.. ++.... ....|++.|+++|+++++|||.|.+ +.++..++
T Consensus 220 Hgv~l~~d~~l~~~l~~~~i~le~cP~SN~~--------l~~~~~-~~~hPi~~ll~~Gv~V~l~TDdp~~~~~~l~~e~ 290 (326)
T 3pao_A 220 HGVRAFEDERLMRRLIDEQIPLTVCPLSNTK--------LCVFDD-MSQHTILDMLERGVKVTVNSDDPAYFGGYVTENF 290 (326)
T ss_dssp ECGGGGGCHHHHHHHHHHTCCEEECHHHHHH--------TTSSSS-GGGCCHHHHHHHTCCEEECCBSHHHHTCCHHHHH
T ss_pred eeeeecccHHHHHHHHHcCCeEEECchhHHH--------hCCCCC-cccChHHHHHHCCCeEEEeCCCcccCCCCHHHHH
Confidence 999888 56899999999999999997641 111000 2346899999999999999998753 35888888
Q ss_pred HHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 462 RTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
..+... .++++++ +...|.|+++..-+.
T Consensus 291 ~~a~~~------------~~l~~~~-l~~l~~nsi~~sf~~ 318 (326)
T 3pao_A 291 HALQQS------------LGMTEEQ-ARRLAQNSLDARLVK 318 (326)
T ss_dssp HHHHHH------------HCCCHHH-HHHHHHHHHHTCC--
T ss_pred HHHHHH------------cCCCHHH-HHHHHHHHHHHHHhc
Confidence 887643 3689999 688889999877654
No 71
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=97.96 E-value=6.1e-05 Score=75.00 Aligned_cols=234 Identities=14% Similarity=0.080 Sum_probs=134.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCccEEEeCcc-----CCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccC-ccchhhHH
Q 008993 240 VSVDERREALLRASNLALSRGVTTVVDFGR-----YYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFP-LETWSSLA 313 (547)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 313 (547)
-+.++++....+.++.+.+.|+..+.-.-. ...+.+.+.-++...+.+++..++.++..++...+. ....++..
T Consensus 89 ~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~~~e~a~ 168 (380)
T 4gxw_A 89 TRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAV 168 (380)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCHHHHH
Confidence 467888889999999999999987764311 011223333334455566666666677777766442 22233333
Q ss_pred HHHHhcCCCCCCcEEEceEEEEEcCC---cCcchhhhhc-------eeEEecccH-HHHHHHHHHHHHHHhcCCCCCCce
Q 008993 314 DLINKTGHVLSDWVYLGGVKAFADGS---LGSNSALFHE-------VAIHAIGDR-ANDLVLDMYKSVVVTTGKRDQRFR 382 (547)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~-------v~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 382 (547)
+.+.......... .-|+.+-.+.. ...+...+.. +.+|+.... ..+.+.++++.+ ...+
T Consensus 169 ~~~~~a~~~~~~~--VvG~dL~g~E~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~l--------ga~R 238 (380)
T 4gxw_A 169 AIVDWMKANRADE--VAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLL--------HVDR 238 (380)
T ss_dssp HHHHHHHHTCCTT--BCEEEEESCCTTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTS--------CCSE
T ss_pred HHHHHHHHhCCCC--EEEEeecCCCCCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHc--------CCcc
Confidence 3222211111111 22333322221 1112222221 889985321 122333333211 1459
Q ss_pred EeecCCC--ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC-CCCChHH
Q 008993 383 IEHAQHL--ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV-ADINPLC 459 (547)
Q Consensus 383 i~H~~~~--~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~-~~~~~~~ 459 (547)
|.|+..+ +++.++++++.++.+.+||.+|.. .+.+..... -..-|++.|+++|++++++||.|. .+.++..
T Consensus 239 IgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~-----l~~v~~~~~-~~~HP~~~l~~~Gv~vtinTDDp~~f~t~Ls~ 312 (380)
T 4gxw_A 239 VDHGYTIVDNPELCARYAERGIVFTVVPTNSYY-----LRTLPPDQW-AERHPMRKMPGLGLKIHPNTDDPTLHKVNPSE 312 (380)
T ss_dssp EEECGGGGGCHHHHHHHHHHTCEEEECTTCHHH-----HHHSCTTTH-HHHCGGGGTGGGTCEEEECCBSHHHHTCCHHH
T ss_pred cccceeeccChHHHHHHHHhCceeEECCcchhh-----hcccccccc-cccChHHHHHHCCCeEEECCCCchhhCCCHHH
Confidence 9999966 567789999999999999998741 111111000 112478999999999999999874 3456677
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 460 AIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
++..+. ...+++.++ ++..+.|+.++.-++
T Consensus 313 Ey~~~~------------~~~gls~~d-l~~l~~nsi~~sF~~ 342 (380)
T 4gxw_A 313 AWELMF------------SHFGFTIAD-LKQFMLNGIDGAWVD 342 (380)
T ss_dssp HHHHHH------------HTSCCCHHH-HHHHHHHHHHHSSSC
T ss_pred HHHHHH------------HHhCcCHHH-HHHHHHHHHHHHcCC
Confidence 766554 345789988 455678888877664
No 72
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=97.83 E-value=0.00058 Score=67.06 Aligned_cols=136 Identities=11% Similarity=0.091 Sum_probs=76.8
Q ss_pred eeEEec--ccHHHHHHHHHHHHHHHhcCCCCCCceEeecC-CCChhHHHHHHhCCcEEEecC-ccccC--C--hhHHHHh
Q 008993 350 VAIHAI--GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQP-QHLLD--D--ADSARKK 421 (547)
Q Consensus 350 v~~H~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~l~~~~~~g~~~~~~p-~~~~~--~--~~~~~~~ 421 (547)
+.+|+. +..+. ++++.+++ .+....+..+.||. ..+.+..+++.+.|..+...- ....+ . .....+.
T Consensus 164 v~iH~~~~~r~a~-e~l~iL~~----~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G~~tf~~~~~~~~~~~~ 238 (330)
T 2ob3_A 164 VTTHTAASQRDGE-QQAAIFES----EGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALL 238 (330)
T ss_dssp EEEECCGGGTHHH-HHHHHHHH----TTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCCTTCTTCHHHHHHH
T ss_pred EEEECCCCCCCHH-HHHHHHHH----cCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeCCCccccccccccccccccc
Confidence 889973 34444 44554433 23222244689998 578888999999999877761 11111 0 0000000
Q ss_pred hChhhhhhhchHHHHHHHCC--CeeeecCCCCC-CCCC-hHHHH--------------HHHHcccCCCCCCCCCCCCCCC
Q 008993 422 LGVDRAERESYLFQSLLANN--ALLALGSDWPV-ADIN-PLCAI--------------RTAMKRIPPGWDNAWIPSERIS 483 (547)
Q Consensus 422 ~g~~~~~~~~~~~~~l~~~G--v~~~~GTD~~~-~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~ 483 (547)
.-.... .....++++.+.| -++.++||+|. .... |+.+- ...+.. ..+.|++
T Consensus 239 ~~~~~~-~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~~g~~~~~n~pn~~~~~~~~~ia~---------l~~~G~~ 308 (330)
T 2ob3_A 239 GIRSWQ-TRALLIKALIDQGYMKQILVSNDWTFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPF---------LREKGVP 308 (330)
T ss_dssp CSSCHH-HHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHHHHCTTGGGHHHHTHHHH---------HHHTTCC
T ss_pred cCCCHH-HHHHHHHHHHHhCCCCeEEEeCCCCCCcccccccCCCcccccCCCCcchHHHHHHHH---------HHHcCCC
Confidence 000000 1112478888998 57899999985 2211 00110 110111 0125799
Q ss_pred HHHHHHHHHHHHHHHcc
Q 008993 484 LTDALIAHTLSAARACF 500 (547)
Q Consensus 484 ~~~al~~aT~n~A~~lg 500 (547)
++++.++.|.||++.|+
T Consensus 309 ~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 309 QETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHHHHHHTHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999997
No 73
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=97.83 E-value=5.2e-06 Score=88.21 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=76.4
Q ss_pred eEeecCCCChhH--HHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhch--HHHHHHHCCCeeeecCCCCCCCC--
Q 008993 382 RIEHAQHLASGT--AARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESY--LFQSLLANNALLALGSDWPVADI-- 455 (547)
Q Consensus 382 ~i~H~~~~~~~~--l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~--~~~~l~~~Gv~~~~GTD~~~~~~-- 455 (547)
+|.|+.++.++. ++.+++.++.+.+||.++... . .... |+..|+++|+++++|||.+....
T Consensus 540 RIgHGv~l~edp~Li~lla~~~I~vevCP~SN~kl--------~-----~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t 606 (701)
T 2a3l_A 540 SIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSL--------F-----LDYHRNPFPVFFLRGLNVSLSTDDPLQIHLT 606 (701)
T ss_dssp SCSCCGGGGGCHHHHHHHHHHTCCEEECHHHHTTT--------T-----CCSTTCSHHHHHHTTCCEEECCBCHHHHCCS
T ss_pred eEEEEeecccCHHHHHHHHHcCCcEEECccchhhh--------c-----cCchHhHHHHHHHCCCcEEEeCCCccccCCC
Confidence 479999998866 799999999999999987511 1 2223 79999999999999999886532
Q ss_pred --ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 456 --NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 456 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
++..++..+... .+++..++.++ |.|++++.++++
T Consensus 607 ~~dL~~Ey~~aa~~------------~~ls~~dl~~l-a~Ns~~asfl~~ 643 (701)
T 2a3l_A 607 KEPLVEEYSIAASV------------WKLSACDLCEI-ARNSVYQSGFSH 643 (701)
T ss_dssp SSHHHHHHHHHHHH------------HTCCHHHHHHH-HHHHHHHSCCCH
T ss_pred CcCHHHHHHHHHHH------------cCCCHHHHHHH-HHHHHHHhCCCH
Confidence 588888877654 24789996666 999999999864
No 74
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=97.62 E-value=0.0016 Score=61.42 Aligned_cols=118 Identities=17% Similarity=0.104 Sum_probs=71.3
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +.+.+++.+++. +. . ...+.|+..-+.+.++.+.+.|+.+.+.+.....
T Consensus 130 v~iH~~~--a~~~~~~il~~~----~~-~-~~~i~H~~~g~~~~~~~~~~~g~~i~~~g~~~~~---------------- 185 (259)
T 1zzm_A 130 VILHSRR--THDKLAMHLKRH----DL-P-RTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYP---------------- 185 (259)
T ss_dssp EEEEEES--CHHHHHHHHHHH----CC-T-TCEEETTCCSCHHHHHHHHHTTCEEEECGGGGCT----------------
T ss_pred EEEEecc--cHHHHHHHHHhc----CC-C-CCEEEEcCCCCHHHHHHHHHCCCEEEECceeecc----------------
Confidence 7888753 334555555443 22 1 2345698777778888888899998877543210
Q ss_pred hchHHHHHHHC-C-CeeeecCCCCCCCCC--------h--HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 430 ESYLFQSLLAN-N-ALLALGSDWPVADIN--------P--LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 430 ~~~~~~~l~~~-G-v~~~~GTD~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
....++++.+. + -++.++||+|...+. | .......+. ...+++.+++.+..|.|+++
T Consensus 186 ~~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~la-----------~~~g~~~e~~~~~~~~Na~r 254 (259)
T 1zzm_A 186 RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLC-----------ELRREPADEIAQALLNNTYT 254 (259)
T ss_dssp TTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHH-----------HHCSSCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHHHH-----------HHHCcCHHHHHHHHHHHHHH
Confidence 00123444443 2 368999999864321 1 111111111 12368999999999999999
Q ss_pred HcccC
Q 008993 498 ACFLE 502 (547)
Q Consensus 498 ~lgl~ 502 (547)
.+|++
T Consensus 255 l~~l~ 259 (259)
T 1zzm_A 255 LFNVP 259 (259)
T ss_dssp HHCCC
T ss_pred HhCcC
Confidence 99863
No 75
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=97.59 E-value=0.003 Score=60.52 Aligned_cols=125 Identities=11% Similarity=0.041 Sum_probs=72.7
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCC-CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAE 428 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~-~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~ 428 (547)
+.+|+.........++.+ +..+....+..+.|+.+ .+.+.++.+.+.|..+.......... .+. .
T Consensus 154 v~iH~~~~~~~~~~~~~l----~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~--------~~~-~- 219 (291)
T 1bf6_A 154 ISTHTSFSTMGLEQLALL----QAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSY--------YPD-E- 219 (291)
T ss_dssp EEEECGGGCSHHHHHHHH----HHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTCTTT--------SCH-H-
T ss_pred EEEeCCCCCChHHHHHHH----HHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccCcccCC--------CCH-H-
Confidence 888874211111223323 33343334668899965 57788888899998887764310000 000 0
Q ss_pred hhchHHHHHHHCC--CeeeecCCCCCCCC---------Ch-HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 008993 429 RESYLFQSLLANN--ALLALGSDWPVADI---------NP-LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAA 496 (547)
Q Consensus 429 ~~~~~~~~l~~~G--v~~~~GTD~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A 496 (547)
.....++++++.| -++.++||+|.... .. +..+...+ ...+++.+++.++.|.||+
T Consensus 220 ~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~l------------~~~g~~~~~~~~~~~~N~~ 287 (291)
T 1bf6_A 220 KRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQL------------RQSGFSQADVDVMLRENPS 287 (291)
T ss_dssp HHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTHHHHH------------HHTTCCHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHHHHHH------------HHcCCCHHHHHHHHHHhHH
Confidence 1122467888887 47899999975310 11 11111111 2246899999999999999
Q ss_pred HHcc
Q 008993 497 RACF 500 (547)
Q Consensus 497 ~~lg 500 (547)
+.+|
T Consensus 288 rl~~ 291 (291)
T 1bf6_A 288 QFFQ 291 (291)
T ss_dssp HHCC
T ss_pred HHhC
Confidence 9885
No 76
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=97.56 E-value=0.0016 Score=62.27 Aligned_cols=121 Identities=17% Similarity=0.061 Sum_probs=75.4
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+. .+...+++.+++.... ....+.|+..-+.++++.+.+.|..+.+....... .
T Consensus 130 v~iH~r--~a~~~~l~il~~~~~~-----~~~~V~H~fsG~~e~a~~~l~~G~yis~~g~i~~~---------------k 187 (287)
T 3rcm_A 130 VFLHER--DASERLLAILKDYRDH-----LTGAVVHCFTGEREALFAYLDLDLHIGITGWICDE---------------R 187 (287)
T ss_dssp EEEEEE--SCHHHHHHHHHTTGGG-----CSCEEECSCCCCHHHHHHHHHTTCEEEECGGGGCT---------------T
T ss_pred EEEEcC--CcHHHHHHHHHHcCCC-----CCeEEEEeCCCCHHHHHHHHHCCcEEEECchhccc---------------c
Confidence 889985 3445556555443211 12256799877889999999999998877542210 0
Q ss_pred hchHHHHHHHC-CC-eeeecCCCCCCCCCh--------------HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHH
Q 008993 430 ESYLFQSLLAN-NA-LLALGSDWPVADINP--------------LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTL 493 (547)
Q Consensus 430 ~~~~~~~l~~~-Gv-~~~~GTD~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~ 493 (547)
....++++++. +. ++.+.||+|...+.+ ...+...+. ...|++++++.+..|.
T Consensus 188 ~~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~lA-----------~~~g~s~eev~~~~~~ 256 (287)
T 3rcm_A 188 RGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVA-----------LHRGESAEHTAAHTTA 256 (287)
T ss_dssp TCGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHHHH-----------HHHTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHHHH-----------HHhCcCHHHHHHHHHH
Confidence 00123445543 22 689999998654322 112211111 1236899999999999
Q ss_pred HHHHHcccCC
Q 008993 494 SAARACFLEN 503 (547)
Q Consensus 494 n~A~~lgl~~ 503 (547)
|+++.+|++.
T Consensus 257 N~~rlf~l~~ 266 (287)
T 3rcm_A 257 TARDFFQLPA 266 (287)
T ss_dssp HHHHHTTCCC
T ss_pred HHHHHHCCCh
Confidence 9999999865
No 77
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=97.49 E-value=0.0037 Score=59.03 Aligned_cols=120 Identities=13% Similarity=0.027 Sum_probs=71.1
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +...+++.+++ .+....+ .+.|+..-+.+.++.+.+.|+.+.+......+ .
T Consensus 128 v~iH~~~--a~~~~~~il~~----~~~~~~~-~v~H~~~g~~~~~~~~~~~g~yi~~~g~~~~~---------------~ 185 (264)
T 1xwy_A 128 VFMHCRD--AHERFMTLLEP----WLDKLPG-AVLHCFTGTREEMQACVAHGIYIGITGWVCDE---------------R 185 (264)
T ss_dssp EEEEEES--CHHHHHHHHGG----GGGGSSC-EEECSCCCCHHHHHHHHHTTCEEEECGGGGCT---------------T
T ss_pred EEEEcCC--chHHHHHHHHh----cCCCCCc-EEEEccCCCHHHHHHHHHCCeEEEECccccCC---------------c
Confidence 8888752 33444444433 2211223 35598766778888888899998887542200 0
Q ss_pred hchHHHHHHHCCC--eeeecCCCCCCCCC---h-----------HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHH
Q 008993 430 ESYLFQSLLANNA--LLALGSDWPVADIN---P-----------LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTL 493 (547)
Q Consensus 430 ~~~~~~~l~~~Gv--~~~~GTD~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~ 493 (547)
....++.+.+..- ++.++||+|...+. + +......+. ...+++.+++.+..+.
T Consensus 186 ~~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a-----------~~~g~~~e~~~~~~~~ 254 (264)
T 1xwy_A 186 RGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIA-----------HWRGEDAAWLAATTDA 254 (264)
T ss_dssp TSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHH-----------HHHTCCHHHHHHHHHH
T ss_pred CcHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHH-----------HHHCcCHHHHHHHHHH
Confidence 0113455555422 68999999864322 1 112211110 1136899999999999
Q ss_pred HHHHHcccC
Q 008993 494 SAARACFLE 502 (547)
Q Consensus 494 n~A~~lgl~ 502 (547)
|+++.+|++
T Consensus 255 Na~rl~~l~ 263 (264)
T 1xwy_A 255 NVKTLFGIA 263 (264)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHhCcc
Confidence 999999874
No 78
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=97.37 E-value=0.0059 Score=60.23 Aligned_cols=142 Identities=11% Similarity=0.048 Sum_probs=87.4
Q ss_pred eeEEecc-cHHHHHHHHHHHHHHHhcCCCCCCceEeecC-CCChhHHHHHH-hCCcEEEecCccc-cCChhHHHHhhChh
Q 008993 350 VAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFG-DQGIVASMQPQHL-LDDADSARKKLGVD 425 (547)
Q Consensus 350 v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~l~~~~-~~g~~~~~~p~~~-~~~~~~~~~~~g~~ 425 (547)
+.+|+.. ..+. +.++.+++. +....+..+.|+. ..+.+..+.+. +.|..+...-... .+..+ .
T Consensus 185 ViiH~r~gr~a~-d~l~iL~e~----g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~~~~~~~~~--------~ 251 (363)
T 3ovg_A 185 ILVHTQLGTMAL-EVAKHLIGF----GANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPDRVKYYPD--------S 251 (363)
T ss_dssp EEEEEETTCSHH-HHHHHHHHH----TCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTTCTTTCCH--------H
T ss_pred EEEeCCCCCCHH-HHHHHHHhc----CCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCeeccccCCh--------h
Confidence 8889752 2333 444555442 3333456778988 45666667777 7898777663210 00000 0
Q ss_pred hhhhhchHHHHHHHCCC--eeeecCCCCCCCC-ChHHH------------HHHHHcccCCCCCCCCCCCCCCCHHHHHHH
Q 008993 426 RAERESYLFQSLLANNA--LLALGSDWPVADI-NPLCA------------IRTAMKRIPPGWDNAWIPSERISLTDALIA 490 (547)
Q Consensus 426 ~~~~~~~~~~~l~~~Gv--~~~~GTD~~~~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 490 (547)
.....++++.+.|. ++.+.||+|.... .+... ...... .....|++.+++.++
T Consensus 252 ---~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~~~~~~---------~a~~rGis~eei~~i 319 (363)
T 3ovg_A 252 ---LLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLP---------LLKQVGVSKEAIFDI 319 (363)
T ss_dssp ---HHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHH---------HHHHHTCCHHHHHHH
T ss_pred ---HHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHHHHHHH---------HHHHcCCCHHHHHHH
Confidence 12235788888886 7999999984321 11111 111111 112347999999999
Q ss_pred HHHHHHHHcccCCCcccccCCCcccEE
Q 008993 491 HTLSAARACFLENDVGSLSPGKIADFV 517 (547)
Q Consensus 491 aT~n~A~~lgl~~~~GsI~~Gk~ADlv 517 (547)
.|.||++.|+++. .+++.+||.-+-|
T Consensus 320 t~~Np~rlf~l~~-~~~~~~~~~~~~~ 345 (363)
T 3ovg_A 320 LVNNPKRVLAFDE-KRNFDPLKVSKEV 345 (363)
T ss_dssp HTHHHHHHTSCCC-CCCCCGGGSCHHH
T ss_pred HHHHHHHHHCCCC-cCccCcccCCHHH
Confidence 9999999999976 6999999876543
No 79
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=97.20 E-value=0.016 Score=56.24 Aligned_cols=125 Identities=7% Similarity=-0.009 Sum_probs=72.4
Q ss_pred eeEEecc-cHHHHHHHHHHHHHHHhcCCCCCCceEeecCC-CChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhh
Q 008993 350 VAIHAIG-DRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-LASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRA 427 (547)
Q Consensus 350 v~~H~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~-~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~ 427 (547)
+.+|+.. ..+....++.+++ .+....+..+.|+.. .+.+.++.+.+.|..+.++......... ..
T Consensus 167 v~iH~~~~~~~~~~~~~~l~~----~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~---------~~ 233 (314)
T 2vc7_A 167 IITHSNAHNNTGLEQQRILTE----EGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFLP---------VD 233 (314)
T ss_dssp EEEECCTTTTHHHHHHHHHHH----TTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTCTTTSC---------HH
T ss_pred EEEeCCCcccChHHHHHHHHH----cCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCcccCCC---------HH
Confidence 7888741 1222344444433 343334557889986 5688889999999988877321100000 00
Q ss_pred hhhchHHHHHHHC--CCeeeecCCCCCCC----C--ChH-------------HHHHHHHcccCCCCCCCCCCCCCCCHHH
Q 008993 428 ERESYLFQSLLAN--NALLALGSDWPVAD----I--NPL-------------CAIRTAMKRIPPGWDNAWIPSERISLTD 486 (547)
Q Consensus 428 ~~~~~~~~~l~~~--Gv~~~~GTD~~~~~----~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 486 (547)
.....++.+.++ +-++.++||++..+ . .+. ......+ ...+++.++
T Consensus 234 -~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~l------------~~~g~~~e~ 300 (314)
T 2vc7_A 234 -KRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTIPFL------------KRNGVNEEV 300 (314)
T ss_dssp -HHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHHHHH------------HHTTCCHHH
T ss_pred -HHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHHHHH------------HHcCCCHHH
Confidence 112245667776 34789999996421 1 111 0111111 234789999
Q ss_pred HHHHHHHHHHHHcc
Q 008993 487 ALIAHTLSAARACF 500 (547)
Q Consensus 487 al~~aT~n~A~~lg 500 (547)
+.+..|.||++.|+
T Consensus 301 ~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 301 IATIFKENPKKFFS 314 (314)
T ss_dssp HHHHHTHHHHHHTC
T ss_pred HHHHHHHCHHHHhC
Confidence 99999999999875
No 80
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=96.96 E-value=0.0091 Score=61.33 Aligned_cols=232 Identities=13% Similarity=0.068 Sum_probs=124.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCcc----CCC---CcccccchhHHHHHHHHHhhCCC--CeeEEEEccC-ccchh
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGR----YYP---GESVQLSWEDFADVYQWASYSEK--MKIRVCLFFP-LETWS 310 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~ 310 (547)
+.+.++..+.+.++.+.+-|+..+.-... +.. +.+.+.-++...+.++++.++.+ +.+++...+. ....+
T Consensus 194 ~~~~~~~~~~e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~~~R~~~~e 273 (508)
T 3lgd_A 194 YAPVFRDYVFRSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDHRSKDVA 273 (508)
T ss_dssp BHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEEETTSCHH
T ss_pred CHHHHHHHHHHHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEEecCCCCHH
Confidence 45677788888899999999987765311 111 11222223333444555555544 5666655432 22222
Q ss_pred h---HHHHHHhcCCCCCCcEEEceEEEEEcCC----cCcchhhhh---c------eeEEecccH-----HHHHHHHHHHH
Q 008993 311 S---LADLINKTGHVLSDWVYLGGVKAFADGS----LGSNSALFH---E------VAIHAIGDR-----ANDLVLDMYKS 369 (547)
Q Consensus 311 ~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~---~------v~~H~~~~~-----~~~~~~~~~~~ 369 (547)
. ..+..........+ ..-|+.+-.+.. +......+. . +.+|+.... ..+.+.+++ .
T Consensus 274 ~a~e~l~~a~~~~~~~~~--~VvG~DLaG~E~~g~p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al-~ 350 (508)
T 3lgd_A 274 VIAESIRMAMGLRIKFPT--VVAGFDLVGHEDTGHSLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDAL-M 350 (508)
T ss_dssp HHHHHHHHHHHHHHHCTT--TEEEEEEESCTTTSCCTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHH-H
T ss_pred HHHHHHHHHHHHHhhCCC--ceEEeccCCCCCCCCCHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHH-h
Confidence 2 22222221110001 122444333322 111222221 1 778874221 122334444 1
Q ss_pred HHHhcCCCCCCceEeecCCCC--hhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeec
Q 008993 370 VVVTTGKRDQRFRIEHAQHLA--SGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALG 447 (547)
Q Consensus 370 ~~~~~~~~~~~~~i~H~~~~~--~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~G 447 (547)
+ + ..+|.|+..+. ++.++++++.++.+.+||.++.. ++.... ....|++.|+++|++++++
T Consensus 351 L----g----a~RIgHGv~l~~dp~l~~~l~~~~I~levCP~SN~~--------l~~v~~-~~~hP~~~ll~~Gv~V~l~ 413 (508)
T 3lgd_A 351 L----N----TTRIGHGFALSKHPAVRTYSWKKDIPIEVCPISNQV--------LKLVSD-LRNHPVATLMATGHPMVIS 413 (508)
T ss_dssp T----T----CSSEEECTTGGGCHHHHHHHHHTTCCEEECHHHHHH--------TTSCSS-GGGCTHHHHHHTTCCEEEC
T ss_pred c----C----CceeeeeEecCccHHHHHHHHhcCCeEEECcchHHH--------hCCCCC-cccChHHHHHHCCCcEEEc
Confidence 1 1 44889999886 68899999999999999997641 111000 2235899999999999999
Q ss_pred CCCCCC-CC-ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 448 SDWPVA-DI-NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 448 TD~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
||.|.. +. ....+.+.+.... ....++.++ |+..+.|+.+..-++
T Consensus 414 TDdp~~f~~~~Ls~Ey~~a~~~~---------~~~~~~~~~-l~~La~NSi~~Sfl~ 460 (508)
T 3lgd_A 414 SDDPAMFGAKGLSYDFYEVFMGI---------GGMKADLRT-LKQLAMNSIKYSTLL 460 (508)
T ss_dssp CBSHHHHTCCTTHHHHHHHHHTT---------SCTTCCHHH-HHHHHHHHHHTSSSC
T ss_pred CCCccccCCCchHHHHHHHHHHc---------ccCCCCHHH-HHHHHHHHHHHHCCC
Confidence 998753 22 3455555544321 112235555 556666777766553
No 81
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=96.84 E-value=0.091 Score=51.07 Aligned_cols=223 Identities=11% Similarity=-0.035 Sum_probs=118.6
Q ss_pred HHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCcc---------------------
Q 008993 249 LLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLE--------------------- 307 (547)
Q Consensus 249 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 307 (547)
...-++.+.+.|..++.|+...+.+ +....+++++++.++.+-....+..+
T Consensus 48 ~~~el~~~~~~G~~tiVd~t~~~~g--------R~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~ 119 (330)
T 3pnz_A 48 SQLDVQDFADLGGKTIVDATAVDYG--------RRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETY 119 (330)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGC--------BCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBH
T ss_pred HHHHHHHHHHhCCCEEEECCCCccc--------cCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccC
Confidence 3444666778999999998754332 23356777777777777776654321
Q ss_pred -------chhhHHHHHHh-cCCC-CCCcEEEceEEEEEc-CCcCcchh-hhhc-----------eeEEecc-cHHHHHHH
Q 008993 308 -------TWSSLADLINK-TGHV-LSDWVYLGGVKAFAD-GSLGSNSA-LFHE-----------VAIHAIG-DRANDLVL 364 (547)
Q Consensus 308 -------~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~d-~~~~~~~~-~~~~-----------v~~H~~~-~~~~~~~~ 364 (547)
..+++.+.+.. .... ..+.++.+=++.=.| ........ .+.. +.+|+.. ..+.+. +
T Consensus 120 ~~~~~~~~~e~l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~~-l 198 (330)
T 3pnz_A 120 YEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQ-I 198 (330)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHHH-H
T ss_pred chhhccCCHHHHHHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHHH-H
Confidence 11223222221 1111 111122222333233 22222111 1111 8889752 223332 5
Q ss_pred HHHHHHHHhcCCCCCCceEeecC-CCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCC-
Q 008993 365 DMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNA- 442 (547)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv- 442 (547)
+.+++ .+....+..+.||. ..+.+..+.+.+.|..+...-... ... .. .. .....++.+.+.|.
T Consensus 199 ~iL~e----~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t-~~~------~~--~~-~~~~~l~~lv~~g~~ 264 (330)
T 3pnz_A 199 EILKQ----ENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAK-IKY------AP--ES-ARIAAILYLVSEGFE 264 (330)
T ss_dssp HHHHH----TTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTC-TTT------CC--HH-HHHHHHHHHHHTTCG
T ss_pred HHHHH----cCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcc-cCC------CC--hH-HHHHHHHHHHHcCCC
Confidence 44433 34333455677996 567778888999998887663211 000 00 00 12235788888885
Q ss_pred -eeeecCCCCCCCCChH-----------HHHHHHHcccCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHcccC
Q 008993 443 -LLALGSDWPVADINPL-----------CAIRTAMKRIPPGWDNAWIPSERISLTD-ALIAHTLSAARACFLE 502 (547)
Q Consensus 443 -~~~~GTD~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~-al~~aT~n~A~~lgl~ 502 (547)
++.+.||+|....-+. ..+...+.. ..+..|++.++ +.++.|.||++.|+++
T Consensus 265 drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~l~~--------~a~~~Gis~ee~i~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 265 DQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFID--------EANEKGFDGEKLVKKFFVDNPARCFTFK 329 (330)
T ss_dssp GGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHHHHH--------HHHHTTSCHHHHHHHHHTHHHHHHSSCC
T ss_pred CeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHHHHH--------HHHHcCCCHHHHHHHHHHHhHHHHhcCC
Confidence 7999999985321111 111111000 00234799998 9999999999999974
No 82
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=96.79 E-value=0.027 Score=54.30 Aligned_cols=122 Identities=15% Similarity=0.103 Sum_probs=71.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+. .+...+++.+++. +. .....+.|+..-+.+.++.+.+.|+.+.+.... ....
T Consensus 143 v~iH~r--~a~~~~~~il~~~----~~-~~~~~i~H~f~g~~~~~~~~l~~g~yi~~~g~~-~~~~-------------- 200 (301)
T 2xio_A 143 MFLHCR--NSHAEFLDITKRN----RD-RCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCS-LKTE-------------- 200 (301)
T ss_dssp EEEEEE--SCHHHHHHHHHHT----GG-GSSCEEETTCCCCHHHHHHHHHTTCEEEECGGG-SSSH--------------
T ss_pred EEEEec--CchHHHHHHHHhc----cC-CCCcEEEEccCCCHHHHHHHHhcCcEEEEcccc-cCCh--------------
Confidence 889984 3445555555442 11 113467899877888888888999988877541 1000
Q ss_pred hchHHHHHHHC-C-CeeeecCCCCCCCC------------------------------Ch--HHHHHHHHcccCCCCCCC
Q 008993 430 ESYLFQSLLAN-N-ALLALGSDWPVADI------------------------------NP--LCAIRTAMKRIPPGWDNA 475 (547)
Q Consensus 430 ~~~~~~~l~~~-G-v~~~~GTD~~~~~~------------------------------~~--~~~~~~~~~~~~~~~~~~ 475 (547)
..+++.+. + =++.++||+|.... .| ...+...+.
T Consensus 201 ---~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~~~~ia--------- 268 (301)
T 2xio_A 201 ---ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMS--------- 268 (301)
T ss_dssp ---HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHHHHHHH---------
T ss_pred ---HHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHHHHHHH---------
Confidence 01234443 2 26899999986421 11 112221111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHcccCCCcccc
Q 008993 476 WIPSERISLTDALIAHTLSAARACFLENDVGSL 508 (547)
Q Consensus 476 ~~~~~~l~~~~al~~aT~n~A~~lgl~~~~GsI 508 (547)
.-.+++.+++.+..+.|+++.++++. +|.+
T Consensus 269 --~l~g~~~e~~~~~~~~Na~rlf~~~~-~~~~ 298 (301)
T 2xio_A 269 --AVRDEDPLELANTLYNNTIKVFFPVI-AENL 298 (301)
T ss_dssp --HHHTCCHHHHHHHHHHHHHHHHCCC------
T ss_pred --HHHCcCHHHHHHHHHHHHHHHhCchh-hhhc
Confidence 11268999999999999999999875 5543
No 83
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=96.68 E-value=0.066 Score=52.87 Aligned_cols=134 Identities=11% Similarity=0.011 Sum_probs=79.3
Q ss_pred eeEEeccc-HHHHHHHHHHHHHHHhcCCCCCCceEeecC-CC-ChhHHHHHHhCCcEEEecCccc--cCChhHHHHhhCh
Q 008993 350 VAIHAIGD-RANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HL-ASGTAARFGDQGIVASMQPQHL--LDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~-~~~~l~~~~~~g~~~~~~p~~~--~~~~~~~~~~~g~ 424 (547)
+.+|+.+. .+..+.++.+++ .+....+..+.||. .. +.+..+.+.+.|..+...-... .+... ....+
T Consensus 206 V~iH~~gr~~a~~e~l~iL~e----~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~---~~~~~ 278 (364)
T 3k2g_A 206 LMVHLPGWFRLAHRVLDLVEE----EGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQ---GVQCP 278 (364)
T ss_dssp EEEECCTTSCCHHHHHHHHHH----TTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTT---TEECC
T ss_pred EEEecCCCCccHHHHHHHHHH----cCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCccccccccc---ccccc
Confidence 88997322 344555555543 23333355677998 35 8888888999998877663211 00000 00000
Q ss_pred hhhhhhchHHHHHHHCCC--eeeecCCCCCCC-------CC---hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHH
Q 008993 425 DRAERESYLFQSLLANNA--LLALGSDWPVAD-------IN---PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHT 492 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv--~~~~GTD~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT 492 (547)
... .....++++.++|. ++.+.||++... .. ....+...+ ...|++.+++.++.|
T Consensus 279 ~d~-~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~~~~~l------------~~~Gis~eei~~~~~ 345 (364)
T 3k2g_A 279 SDD-EVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFLPRL------------RRHGLDDAALETLMV 345 (364)
T ss_dssp CHH-HHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHHHHH------------HHTTCCHHHHHHHHT
T ss_pred cHH-HHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHHHHHHH------------HHcCCCHHHHHHHHH
Confidence 000 12235788888885 799999987421 11 111121111 234799999999999
Q ss_pred HHHHHHcccCC
Q 008993 493 LSAARACFLEN 503 (547)
Q Consensus 493 ~n~A~~lgl~~ 503 (547)
.||++.|++..
T Consensus 346 ~Np~rlf~l~~ 356 (364)
T 3k2g_A 346 TNPRRVFDASI 356 (364)
T ss_dssp HHHHHHHCTTS
T ss_pred HHHHHHhCCCc
Confidence 99999999875
No 84
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=96.64 E-value=0.15 Score=49.99 Aligned_cols=225 Identities=13% Similarity=0.106 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhhCCCCeeEEEEccCccc--------------
Q 008993 243 DERREALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASYSEKMKIRVCLFFPLET-------------- 308 (547)
Q Consensus 243 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 308 (547)
++..+...+.++.+.+.|+.++.|....+.+ +....+++++++.++.+.....+-.+.
T Consensus 79 ~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~G--------Rd~~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~ 150 (360)
T 3tn4_A 79 DESLRVAVEAAEKMKRHGIQTVVDPTPNDCG--------RNPAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLG 150 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCCTTTT--------CCHHHHHHHHHHHCCEEEEEECCCCGGGSCTHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHhcCCCeEEECCCCCcC--------cCHHHHHHHHHHcCCCEEEeCccccCcccCCcccchhhhcc
Confidence 3334455566777889999999998755433 334677777777777776665432211
Q ss_pred --hhhHHHHHH-hcCCC-CCCcEEEceEEEEEc-CCcCcchhhhhc------------eeEEecccHHHHHHHHHHHHHH
Q 008993 309 --WSSLADLIN-KTGHV-LSDWVYLGGVKAFAD-GSLGSNSALFHE------------VAIHAIGDRANDLVLDMYKSVV 371 (547)
Q Consensus 309 --~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~d-~~~~~~~~~~~~------------v~~H~~~~~~~~~~~~~~~~~~ 371 (547)
.+++.+.+. +.... -.+-++.+=++...+ +.+........+ +.+|..........++.++
T Consensus 151 ~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~--- 227 (360)
T 3tn4_A 151 TAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLL--- 227 (360)
T ss_dssp CHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHH---
Confidence 122222221 11111 111233333343322 223322222111 8888753322222233332
Q ss_pred HhcCCCCCCceEee-cCCCChhHHHHHHhCCcEEEecC----ccccCChhHHHHhhChhhhhhhchHHHHHHHCCC--ee
Q 008993 372 VTTGKRDQRFRIEH-AQHLASGTAARFGDQGIVASMQP----QHLLDDADSARKKLGVDRAERESYLFQSLLANNA--LL 444 (547)
Q Consensus 372 ~~~~~~~~~~~i~H-~~~~~~~~l~~~~~~g~~~~~~p----~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv--~~ 444 (547)
+.+....+..+.| |...+.+..+.+.+.|..+...- .+..+.. .. .....++.+.+.|- ++
T Consensus 228 -eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~~~~~p~----------d~-~r~~~l~~lv~~g~~drI 295 (360)
T 3tn4_A 228 -EHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQGMVGAPT----------DE-ERVRTLLALLRDGYEKQI 295 (360)
T ss_dssp -HTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCCSTTCCC----------HH-HHHHHHHHHHHTTCGGGE
T ss_pred -HcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcccccccccCCCC----------hH-HHHHHHHHHHHhcCcceE
Confidence 3355556778889 56777788889999998876531 1000000 01 22345788889886 79
Q ss_pred eecCCC-------CCCCCChHHHHHH----------HHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 008993 445 ALGSDW-------PVADINPLCAIRT----------AMKRIPPGWDNAWIPSERISLTDALIAHTLSAARAC 499 (547)
Q Consensus 445 ~~GTD~-------~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~l 499 (547)
.++||+ |+..+.++..... .+.+ .++.|++.+++-++.+.||++.|
T Consensus 296 LLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~---------L~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 296 MLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPA---------LKNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp EECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHH---------HHHTTCCHHHHHHHHTHHHHHHH
T ss_pred EEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHH---------HHHcCCCHHHHHHHHHHhHHHHh
Confidence 999997 4433333332211 0000 12458999999999999999986
No 85
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=96.61 E-value=0.076 Score=49.76 Aligned_cols=120 Identities=13% Similarity=0.096 Sum_probs=67.2
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHh-CCcEEEecCccccCChhHHHHhhChhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGD-QGIVASMQPQHLLDDADSARKKLGVDRAE 428 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~-~g~~~~~~p~~~~~~~~~~~~~~g~~~~~ 428 (547)
+.+|+... ...+++.+++ .+....+. +.|+...+.+.+..+.+ .|+.+.+........
T Consensus 125 v~iH~~~~--~~~~~~~l~~----~p~~~~~~-i~H~~~g~~~~~~~~l~~~~~y~~~sg~~~~~~-------------- 183 (265)
T 2gzx_A 125 IIIHNREA--TQDCIDILLE----EHAEEVGG-IMHSFSGSPEIADIVTNKLNFYISLGGPVTFKN-------------- 183 (265)
T ss_dssp EEEEEESC--HHHHHHHHHH----TTGGGTCE-EETTCCSCHHHHHHHHHTSCCEEEECGGGGCSS--------------
T ss_pred EEEEeccc--HHHHHHHHHh----cCCCCCcE-EEEcCCCCHHHHHHHHHHCCceEEecceeecCC--------------
Confidence 78887532 3344444433 33112233 56776556666666666 788888775432111
Q ss_pred hhchHHHHHHH-CCC-eeeecCCCCCCCCCh----------HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 008993 429 RESYLFQSLLA-NNA-LLALGSDWPVADINP----------LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAA 496 (547)
Q Consensus 429 ~~~~~~~~l~~-~Gv-~~~~GTD~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A 496 (547)
...++.+.+ .|. ++.+|||+|.....+ ...+...+. ...+++.++.-+..+.|++
T Consensus 184 --~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~i~~~Na~ 250 (265)
T 2gzx_A 184 --AKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIA-----------ELKGLSYEEVCEQTTKNAE 250 (265)
T ss_dssp --CCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHHHH-----------HHTTCCHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHHHHH-----------HHhCCCHHHHHHHHHHHHH
Confidence 012344444 443 799999998654321 111111111 1136899999999999999
Q ss_pred HHcccCC
Q 008993 497 RACFLEN 503 (547)
Q Consensus 497 ~~lgl~~ 503 (547)
+.+|+..
T Consensus 251 rl~~~~~ 257 (265)
T 2gzx_A 251 KLFNLNS 257 (265)
T ss_dssp HHHC---
T ss_pred HHhCCch
Confidence 9999864
No 86
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=96.29 E-value=0.28 Score=47.77 Aligned_cols=138 Identities=14% Similarity=0.004 Sum_probs=75.9
Q ss_pred eeEEec-ccHHHHHHHHHHHHHHHhcCCCCCCceEeecC-CCChhHHHHHHhCCcEEEecCccc-cCChhHHHHhhChhh
Q 008993 350 VAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-HLASGTAARFGDQGIVASMQPQHL-LDDADSARKKLGVDR 426 (547)
Q Consensus 350 v~~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~~~~~~l~~~~~~g~~~~~~p~~~-~~~~~~~~~~~g~~~ 426 (547)
+.+|+. +..+.+ .++.+++ .+....+..+.||. ..+.++.+.+.+.|..+...-... .+.. .+..
T Consensus 189 ViiH~~~gr~a~~-~~~iL~~----~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g~~t~~~~~-------~p~~ 256 (339)
T 3gtx_A 189 IITHTQEGQQGPQ-QAELLTS----LGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVG-------TPTD 256 (339)
T ss_dssp EEEECSTTCCHHH-HHHHHHH----TTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTT-------CCCH
T ss_pred EEEeCCCCcCHHH-HHHHHHH----cCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEccCccccccC-------CCch
Confidence 889973 233333 3554443 33333355678998 577888889999998887754311 0000 0000
Q ss_pred hhhhchHHHHHHHCCC--eeeecCCCCCCC-CCh----HHH-HHHHHcccCC--CCCCCCCCCCCCCHHHHHHHHHHHHH
Q 008993 427 AERESYLFQSLLANNA--LLALGSDWPVAD-INP----LCA-IRTAMKRIPP--GWDNAWIPSERISLTDALIAHTLSAA 496 (547)
Q Consensus 427 ~~~~~~~~~~l~~~Gv--~~~~GTD~~~~~-~~~----~~~-~~~~~~~~~~--~~~~~~~~~~~l~~~~al~~aT~n~A 496 (547)
. .....++++.++|. ++.+.||+|.+. ..| ... .......... ..-.......|++.+++.++.|.||+
T Consensus 257 ~-~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~ 335 (339)
T 3gtx_A 257 A-ERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPAIPEAALPAVKDWHPLHISDDILPDLRRRGITEEQVGQMTVGNPA 335 (339)
T ss_dssp H-HHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHH
T ss_pred H-HHHHHHHHHHHhcCCCeEEEecCCCccccCCcccccccccccCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 0 11234678888876 799999998531 111 000 0000000000 00000112457999999999999999
Q ss_pred HHcc
Q 008993 497 RACF 500 (547)
Q Consensus 497 ~~lg 500 (547)
+.|+
T Consensus 336 rlf~ 339 (339)
T 3gtx_A 336 RLFG 339 (339)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9875
No 87
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=96.02 E-value=0.14 Score=47.60 Aligned_cols=117 Identities=15% Similarity=0.057 Sum_probs=70.8
Q ss_pred ee-EEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhh
Q 008993 350 VA-IHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAE 428 (547)
Q Consensus 350 v~-~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~ 428 (547)
+. +|+. .+.+.+++.+++. +. ....+.|+..-+.++++++.+.|..+...+.... .
T Consensus 120 viSiH~r--~a~~~~~~il~~~----~~--~~~~v~H~fsG~~e~a~~~l~~G~yis~~g~~~~-----------~---- 176 (254)
T 3gg7_A 120 ILSIHSR--RAESEVLNCLEAN----PR--SGTPILHWYSGSVTELRRAISLGCWFSVGPTMVR-----------T---- 176 (254)
T ss_dssp EEEEECT--TCHHHHHHHHHHC----GG--GEEEEEETCCSCHHHHHHHHHTTCEEEECHHHHT-----------S----
T ss_pred EEEEEcC--CcHHHHHHHHHHc----CC--CCcEEEEeCCCCHHHHHHHHcCCcEEEECcccCc-----------h----
Confidence 54 7774 3445556655553 11 1124679988889999999999998887764220 0
Q ss_pred hhchHHHHHHHC-CC-eeeecCCCCCCCC-----C--hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 008993 429 RESYLFQSLLAN-NA-LLALGSDWPVADI-----N--PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARAC 499 (547)
Q Consensus 429 ~~~~~~~~l~~~-Gv-~~~~GTD~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~l 499 (547)
..++++.+. .. ++.+.||+|.... . ....+...+. .-.+++.+++.+..+.|+.+.+
T Consensus 177 ---~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~~~iA-----------~~~g~~~ee~~~~~~~N~~~lf 242 (254)
T 3gg7_A 177 ---QKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLS-----------KIWQIPASEVERIVKENVSRLL 242 (254)
T ss_dssp ---HHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHHHHHH-----------HHHTSCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHHHHHH-----------HHhCcCHHHHHHHHHHHHHHHH
Confidence 112334332 32 6899999986421 1 2222222221 1126899999999999999999
Q ss_pred ccCC
Q 008993 500 FLEN 503 (547)
Q Consensus 500 gl~~ 503 (547)
++..
T Consensus 243 ~~~~ 246 (254)
T 3gg7_A 243 GTVR 246 (254)
T ss_dssp HC--
T ss_pred CCCc
Confidence 8753
No 88
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=95.91 E-value=0.084 Score=49.50 Aligned_cols=120 Identities=16% Similarity=0.129 Sum_probs=73.3
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +...+++.+++. +....+ .+.|+...+.+.++.+.+.|+.+.+++.....
T Consensus 127 v~iH~~~--~~~~~~~~l~~~----~~p~~~-~v~H~~~~~~~~~~~~~~~g~~~~~sg~~~~~---------------- 183 (265)
T 1yix_A 127 VIVHTRD--ARADTLAILREE----KVTDCG-GVLHCFTEDRETAGKLLDLGFYISFSGIVTFR---------------- 183 (265)
T ss_dssp EEEEEES--CHHHHHHHHHHT----TGGGTC-EEETTCCSCHHHHHHHHTTTCEEEECGGGGST----------------
T ss_pred EEEEecC--chHHHHHHHHhc----CCCCCC-EEEEcCCCCHHHHHHHHHCCcEEEECCccccC----------------
Confidence 7888752 334445444432 111223 34599888888888888899999888642211
Q ss_pred hchHHHHHHHC-C-CeeeecCCCCCCCCC--------h--HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 430 ESYLFQSLLAN-N-ALLALGSDWPVADIN--------P--LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 430 ~~~~~~~l~~~-G-v~~~~GTD~~~~~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
....++.+.+. | -++.+|||+|..... + +......+. ...+++.+++.++.+.|+++
T Consensus 184 ~~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~-----------~~~~~~~~~~~~i~~~Na~r 252 (265)
T 1yix_A 184 NAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMA-----------VLKGVAVEELAQVTTDNFAR 252 (265)
T ss_dssp TCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHH-----------HHHTSCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHH-----------HHhCcCHHHHHHHHHHHHHH
Confidence 01124455554 4 378999999865321 1 111111111 11368999999999999999
Q ss_pred HcccCC
Q 008993 498 ACFLEN 503 (547)
Q Consensus 498 ~lgl~~ 503 (547)
.+|++.
T Consensus 253 l~~l~~ 258 (265)
T 1yix_A 253 LFHIDA 258 (265)
T ss_dssp HTTCCG
T ss_pred HhCcCh
Confidence 999853
No 89
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=95.54 E-value=0.22 Score=49.08 Aligned_cols=138 Identities=14% Similarity=0.066 Sum_probs=79.5
Q ss_pred eeEEe-cccHHHHHHHHHHHHHHHhcCCCCCCceEeecC-C-CChhHHHHHHhCCcEEEecCcc--ccCChhHHHHhhCh
Q 008993 350 VAIHA-IGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQ-H-LASGTAARFGDQGIVASMQPQH--LLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~-~-~~~~~l~~~~~~g~~~~~~p~~--~~~~~~~~~~~~g~ 424 (547)
|.+|. ....+..+.++.+++ ..+....+..+.||. . .+.+....+.+.|..+...-.- ..+... .. .+
T Consensus 196 V~iH~~r~~~a~~e~l~iL~e---~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~tf~~~---~~-~~ 268 (365)
T 3rhg_A 196 MNIHMPGWQRRGDEVLDILLT---EMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDISFPKE---GA-AP 268 (365)
T ss_dssp EEEECCTTSCCHHHHHHHHTT---TTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCBCSSS---CB-CC
T ss_pred EEEECCCCCcCHHHHHHHHHh---ccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCcccccccc---cc-cc
Confidence 68886 322333444444422 213333355678999 4 6888888999999888766320 011000 00 00
Q ss_pred hhhhhhchHHHHHHHCCC--eeeecCCCCCCCCChH-------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 008993 425 DRAERESYLFQSLLANNA--LLALGSDWPVADINPL-------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSA 495 (547)
Q Consensus 425 ~~~~~~~~~~~~l~~~Gv--~~~~GTD~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~ 495 (547)
... .....++++.++|. ++.+.||++....-+. .-+...... ....|++.+++.++.|.||
T Consensus 269 ~d~-~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~~~~~~~---------~~~~Gis~e~i~~~~~~Np 338 (365)
T 3rhg_A 269 SVM-DTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVPNVFLSL---------LAQRGIDKTIIDKLCIDNP 338 (365)
T ss_dssp CHH-HHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHHHTHHHH---------HHHTTCCHHHHHHHTTHHH
T ss_pred chH-HHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHHHHHHHH---------HHHcCCCHHHHHHHHHHHH
Confidence 000 12235788888886 7999999876432111 111111000 1244799999999999999
Q ss_pred HHHcccCCC
Q 008993 496 ARACFLEND 504 (547)
Q Consensus 496 A~~lgl~~~ 504 (547)
++.|+++.+
T Consensus 339 ~rlf~l~~~ 347 (365)
T 3rhg_A 339 ANLLAAENL 347 (365)
T ss_dssp HHHHHSCCS
T ss_pred HHHHCCCCc
Confidence 999999764
No 90
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=94.20 E-value=0.47 Score=44.54 Aligned_cols=116 Identities=17% Similarity=0.178 Sum_probs=72.2
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +...+++.+++ .+ ..+ .+.|+..-+.+.++.+.+.|+.+.+.+.... +
T Consensus 142 v~iH~~~--a~~~~~~il~~----~~--~~~-~v~H~~~g~~~~~~~~~~~g~~i~~~g~~~~----------~------ 196 (272)
T 2y1h_A 142 VNVHSRS--AGRPTINLLQE----QG--AEK-VLLHAFDGRPSVAMEGVRAGYFFSIPPSIIR----------S------ 196 (272)
T ss_dssp EEEECTT--CHHHHHHHHHH----TT--CCS-EEEETCCSCHHHHHHHHHTTCEEEECGGGGT----------C------
T ss_pred EEEEeCC--cHHHHHHHHHh----CC--CCC-EEEEccCCCHHHHHHHHHCCCEEEECCcccC----------c------
Confidence 8899852 33444444433 23 124 4459987777888888899999988865321 0
Q ss_pred hchHHHHHHHCC--CeeeecCCCCCCCC------Ch--HHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 008993 430 ESYLFQSLLANN--ALLALGSDWPVADI------NP--LCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARAC 499 (547)
Q Consensus 430 ~~~~~~~l~~~G--v~~~~GTD~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~l 499 (547)
..++++.+.. -++.++||+|...+ .| ...+...+. ...|++.+++.+..+.|+++++
T Consensus 197 --~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~~la-----------~~~g~~~e~~~~~~~~N~~~l~ 263 (272)
T 2y1h_A 197 --GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIA-----------QVKGISVEEVIEVTTQNALKLF 263 (272)
T ss_dssp --HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHHHHH-----------HHHTSCHHHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHHHHH-----------HHHCcCHHHHHHHHHHHHHHHH
Confidence 0234444432 26799999986422 11 122222111 1136899999999999999999
Q ss_pred ccCC
Q 008993 500 FLEN 503 (547)
Q Consensus 500 gl~~ 503 (547)
++++
T Consensus 264 ~~~~ 267 (272)
T 2y1h_A 264 PKLR 267 (272)
T ss_dssp TTHH
T ss_pred HhHH
Confidence 9865
No 91
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=92.97 E-value=1.3 Score=41.36 Aligned_cols=119 Identities=16% Similarity=0.155 Sum_probs=70.8
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+.. +...+++.++ +.+....+..+ |+...+.+.++.+.+.|+.+.+........
T Consensus 136 v~iH~~~--~~~~~~~il~----~~p~~~~~~I~-H~~~g~~~~~~~~~~~g~y~~~sg~~~~~~--------------- 193 (268)
T 1j6o_A 136 LVVHIRD--AYSEAYEILR----TESLPEKRGVI-HAFSSDYEWAKKFIDLGFLLGIGGPVTYPK--------------- 193 (268)
T ss_dssp EEEEEES--CHHHHHHHHH----HSCCCSSCEEE-TTCCSCHHHHHHHHHHTEEEEECGGGGCTT---------------
T ss_pred EEEEeCc--hHHHHHHHHH----hcCCCCCCEEE-EcCCCCHHHHHHHHHCCCeEEecccccccc---------------
Confidence 8889752 3344444443 33422334455 988777888888888898888775422110
Q ss_pred hchHHHHHHHC-CC-eeeecCCCCCCCCChH----------HHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 008993 430 ESYLFQSLLAN-NA-LLALGSDWPVADINPL----------CAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAAR 497 (547)
Q Consensus 430 ~~~~~~~l~~~-Gv-~~~~GTD~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~ 497 (547)
...++.+.+. +. ++.+|||+|.....+. ......+. ...+++.++.-+..+.|+++
T Consensus 194 -~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~la-----------~~~~~~~e~~~~i~~~Na~r 261 (268)
T 1j6o_A 194 -NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETIS-----------QVLGVPEAKVDEATTENARR 261 (268)
T ss_dssp -CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHH-----------HHHTSCHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHHHH-----------HHhCcCHHHHHHHHHHHHHH
Confidence 0123344443 33 7899999987543221 11111111 11268999999999999999
Q ss_pred HcccC
Q 008993 498 ACFLE 502 (547)
Q Consensus 498 ~lgl~ 502 (547)
.+|+.
T Consensus 262 lf~l~ 266 (268)
T 1j6o_A 262 IFLEV 266 (268)
T ss_dssp HHHSC
T ss_pred HhCcc
Confidence 99874
No 92
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=89.86 E-value=4.7 Score=37.78 Aligned_cols=58 Identities=21% Similarity=0.126 Sum_probs=37.7
Q ss_pred HHHHHHC-CC-eeeecCCCCCCCCC---hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 434 FQSLLAN-NA-LLALGSDWPVADIN---PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 434 ~~~l~~~-Gv-~~~~GTD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
++.+++. |. ++.+|||.|..... .+......+.. .+++.++.-+....|+++.+|++.
T Consensus 219 ~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~NA~rl~~l~~ 281 (288)
T 2ffi_A 219 LCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQFEA------------LGCSAQLRQALLLDTARALFGFEL 281 (288)
T ss_dssp HHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHHHHH------------HCCCHHHHHHHHTHHHHHHTTCCC
T ss_pred HHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHHHHH------------HCCCHHHHHHHHHHCHHHHhCccc
Confidence 5556553 65 79999999876431 22222222221 234788888888899999999864
No 93
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=89.18 E-value=5.9 Score=37.40 Aligned_cols=58 Identities=14% Similarity=0.162 Sum_probs=36.5
Q ss_pred HHHHH-HCCC-eeeecCCCCCCCCC---hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 434 FQSLL-ANNA-LLALGSDWPVADIN---PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 434 ~~~l~-~~Gv-~~~~GTD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
++.++ ..|. ++.+|||+|..... .+..+...+.. .+++.++.-+..+.|+++.+|+++
T Consensus 231 l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~~~l~~------------~~~~~~~~~~i~~~NA~rl~~l~~ 293 (294)
T 4i6k_A 231 YNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAIKAFKQ------------IVFDKHEQCLILNQNPTELFGFSR 293 (294)
T ss_dssp HHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHHHHHHH------------HCCCHHHHHHHHTHHHHHHHTC--
T ss_pred HHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHHHHHHH------------HCCCHHHHHHHHHHCHHHHhCCCC
Confidence 44444 4566 79999999987543 12222222211 136888888888999999999854
No 94
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=86.39 E-value=16 Score=33.70 Aligned_cols=49 Identities=16% Similarity=0.049 Sum_probs=33.3
Q ss_pred CCCeeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 440 NNALLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 440 ~Gv~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
.+-++.+|||.|......... .+ ...+++.++.-+....|+++.+|++.
T Consensus 218 ~~dril~gSD~P~~~~~~~~~---~~------------~~~~l~~~~~~~i~~~Na~rl~~l~~ 266 (272)
T 3cjp_A 218 LPLKCIFGTDMPFGDLQLSIE---AI------------KKMSNDSYVANAVLGDNISRLLNIEG 266 (272)
T ss_dssp STTTEECCCCTTSSCHHHHHH---HH------------HHHCSSHHHHHHHHTHHHHHHHTC--
T ss_pred CCCeEEEeCCCCCCChHHHHH---HH------------HhcCCCHHHHHHHHHHHHHHHhCccC
Confidence 356899999998754322211 11 11358999989999999999999863
No 95
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=83.66 E-value=2.4 Score=38.02 Aligned_cols=101 Identities=11% Similarity=-0.113 Sum_probs=64.9
Q ss_pred CceEeecCCC------ChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhch----HHHHHHHCCCeeeecCC
Q 008993 380 RFRIEHAQHL------ASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESY----LFQSLLANNALLALGSD 449 (547)
Q Consensus 380 ~~~i~H~~~~------~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~----~~~~l~~~Gv~~~~GTD 449 (547)
-+.+.|.... +.+.++.+++.|+.+.++-....... +..|. .... -++...+.|+++.+|||
T Consensus 97 vDII~Hp~~~~~~~~~~~~~a~~A~e~gv~lEIn~s~~~~~~-------~~~R~-~~~~~~~~il~l~k~~g~~ivisSD 168 (212)
T 1v77_A 97 VDAIISPWVNRKDPGIDHVLAKLMVKKNVALGFSLRPLLYSN-------PYERA-NLLRFMMKAWKLVEKYKVRRFLTSS 168 (212)
T ss_dssp CSEEECTTTTSSSCSCCHHHHHHHHHHTCEEEEESHHHHHSC-------HHHHH-HHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CCEEecccccccCCCCCHHHHHHHHHCCeEEEEECcHHhcCC-------cchHH-HHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 4577787654 56778888899999998876422100 01111 1122 24455678999999999
Q ss_pred CCCCC--CChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 450 WPVAD--INPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 450 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
+.... .++...... . ...|++.++++.+.|.+|.+++..
T Consensus 169 Ah~~~~v~~~~~~~~l-~------------~~~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 169 AQEKWDVRYPRDLISL-G------------VVIGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp CSSGGGCCCHHHHHHH-H------------HHTTCCHHHHHHTTTHHHHHHHC-
T ss_pred CCChhhcCCHHHHHHH-H------------HHcCCCHHHHHHHHHHHHHHHHHh
Confidence 75432 233333322 2 346899999999999999998764
No 96
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=80.88 E-value=20 Score=34.31 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=72.3
Q ss_pred eeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhh
Q 008993 350 VAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAER 429 (547)
Q Consensus 350 v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 429 (547)
+.+|+. .+.+.+++.+++. +... ...+.||..-+.++++++.+.|..+.+..... ....
T Consensus 171 viiH~r--~A~~d~l~iL~~~----~~~~-~~gViH~FsGs~e~a~~~l~lG~yis~~G~~~-k~~~------------- 229 (325)
T 3ipw_A 171 FFFHCR--KSWSDLCQLNKEL----GYNG-CKGVVHCFDGTEEEMNQILNEGWDIGVTGNSL-QSIE------------- 229 (325)
T ss_dssp EEEEEE--SCHHHHHHHHHHT----TCTT-SCEEECSCCCCHHHHHHHHHTTCEEEECSGGG-SSHH-------------
T ss_pred EEEEeC--chHHHHHHHHHhc----CCCC-CcEEEEECCCCHHHHHHHHhcCcEEeeCcccc-CcHH-------------
Confidence 889985 3456666666543 2111 23567999999999999999999988887521 1110
Q ss_pred hchHHHHHHHC-CC-eeeecCCCCCCCCC----------------------------------hHHHHHHHHcccCCCCC
Q 008993 430 ESYLFQSLLAN-NA-LLALGSDWPVADIN----------------------------------PLCAIRTAMKRIPPGWD 473 (547)
Q Consensus 430 ~~~~~~~l~~~-Gv-~~~~GTD~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~ 473 (547)
.+ ++.+. .. ++.+-||+|...+. ....+...+.
T Consensus 230 ---~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~~~iA------- 298 (325)
T 3ipw_A 230 ---LL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMS------- 298 (325)
T ss_dssp ---HH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHHHHHH-------
T ss_pred ---HH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHHHHHH-------
Confidence 11 22222 22 57899999865221 1111111111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 474 NAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 474 ~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.-.+++++++.+..+.|.-+.++++
T Consensus 299 ----~l~g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 299 ----SIKHISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp ----HHHTCCHHHHHHHHHHHHHHHHSCC
T ss_pred ----HhhCcCHHHHHHHHHHHHHHHhCcC
Confidence 1226899999999999999998864
No 97
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=80.45 E-value=29 Score=32.39 Aligned_cols=52 Identities=13% Similarity=0.013 Sum_probs=34.8
Q ss_pred CCC-eeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCCCcc
Q 008993 440 NNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLENDVG 506 (547)
Q Consensus 440 ~Gv-~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~~~G 506 (547)
.|. ++.+|||+|.... -..+ ..+ .+.+++.++.-+....|+++.+|+..+-|
T Consensus 233 ~g~drllfgSD~P~~~~--~~~~-~~~------------~~l~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 233 FLADRMLFGTAYPMCPL--KEYT-EWF------------LTLPIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp GGGGTBCCCCCBTSSCH--HHHH-HHH------------HTSSCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred hCcceEEEecCCCCCCH--HHHH-HHH------------HHCCCCHHHHHHHHHHHHHHHhCcccccc
Confidence 344 6899999987642 2222 211 12368999988889999999999976544
No 98
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=80.19 E-value=2.1 Score=39.77 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=60.1
Q ss_pred eeEEeccc---HHHHHHHHHHHHHHHhcCCCCCCceEeecCCCChhHHHHHHhCCcEEEec--CccccCChhHHHHhhCh
Q 008993 350 VAIHAIGD---RANDLVLDMYKSVVVTTGKRDQRFRIEHAQHLASGTAARFGDQGIVASMQ--PQHLLDDADSARKKLGV 424 (547)
Q Consensus 350 v~~H~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~~~~~~l~~~~~~g~~~~~~--p~~~~~~~~~~~~~~g~ 424 (547)
+.+|+... .+.+.+++.+++. +....+..+.|| +.++++++.+.|..+... |....+.
T Consensus 126 v~iH~r~~~~~~a~~~~~~il~~~----~~~~~~~vi~H~---~~~~a~~~l~~G~yis~~~~pg~~t~~---------- 188 (261)
T 3guw_A 126 CIIHTPRGNKLKATRKTLEILESL----DFPADLAVIDHV---NFETLDMVLETEYWIGLTVQPGKLSAE---------- 188 (261)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHT----TCCTTSEEEESC---CTTTHHHHHTSSSEEEEECC-----------------
T ss_pred EEEEcCCCcccchHHHHHHHHHHc----CCCCCCEEEEeC---CHHHHHHHHhCCEEEEecCCCCcccHH----------
Confidence 77887532 4456666655443 322234466798 677788888999887766 4422210
Q ss_pred hhhhhhchHHHHH-HHCCC-eeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHccc
Q 008993 425 DRAERESYLFQSL-LANNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPS-ERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 425 ~~~~~~~~~~~~l-~~~Gv-~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~al~~aT~n~A~~lgl 501 (547)
+. +++ .+-+. ++.+.||+|....+|.. +.. ......+ .+++. +.+..+.|+.+.+|+
T Consensus 189 -~~-------~~~v~~ipldrlLlETD~P~~pn~P~~-----v~~-----~~~~la~~~g~~~--v~~~~~~Na~rlf~~ 248 (261)
T 3guw_A 189 -DA-------ARIVAEHGPERFMLNSDAGYRDVEITT-----VAE-----AAVKIEEAVGREE--MEKVARENARKFLRV 248 (261)
T ss_dssp -CC-------TTGGGGCC-CCEEEECCCCCC-----------CCC-----CTTHHHHHCTTGG--GGHHHHSSHHHHTTC
T ss_pred -HH-------HHHHHhCCcceEEEecCCCCCCCCHHH-----HHH-----HHHHHHhhCChhH--HHHHHHHHHHHHHCC
Confidence 00 111 22232 58999999873322210 000 0000111 35554 677788899999998
Q ss_pred CC
Q 008993 502 EN 503 (547)
Q Consensus 502 ~~ 503 (547)
+.
T Consensus 249 ~~ 250 (261)
T 3guw_A 249 LE 250 (261)
T ss_dssp --
T ss_pred Cc
Confidence 65
No 99
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=78.96 E-value=7.8 Score=35.92 Aligned_cols=203 Identities=12% Similarity=0.071 Sum_probs=97.3
Q ss_pred HHHHHHHHhCCccEEEeCccCCCCc--ccccchhHHHHHHHHHhhCCCCeeEEEEccCccchhhHHHHHHhcCCCCCCcE
Q 008993 250 LRASNLALSRGVTTVVDFGRYYPGE--SVQLSWEDFADVYQWASYSEKMKIRVCLFFPLETWSSLADLINKTGHVLSDWV 327 (547)
Q Consensus 250 ~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (547)
.+.++.+.+.|++.+.--.....+. .....+.+..+.++++.++...++++....+..-.+...+.+.+.....
T Consensus 23 l~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev~~~~~~~~~l~~~~~~~---- 98 (262)
T 3qy7_A 23 IEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEIRIYGEVEQDLAKRQLLS---- 98 (262)
T ss_dssp HHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEEECCTTHHHHHHTTCSCC----
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEEecchhHHHHHhcCCCcE----
Confidence 3457777889998775433221111 1111233334445555444455677777666555555554444321110
Q ss_pred EEceEEEEEcCCcCcchhhhhceeEEec-ccHHHHHHHHHHHHHHHhcCCCCCCceEeecCC-----CChhHHHHHHhCC
Q 008993 328 YLGGVKAFADGSLGSNSALFHEVAIHAI-GDRANDLVLDMYKSVVVTTGKRDQRFRIEHAQH-----LASGTAARFGDQG 401 (547)
Q Consensus 328 ~~~~~~~~~d~~~~~~~~~~~~v~~H~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~-----~~~~~l~~~~~~g 401 (547)
+.+.+.+ + +..+.. ....+.. .+..+.. .| .-..+.|..- -.++.++.+++.|
T Consensus 99 -l~~~~~v-----------l--~e~~~~~~~~~~~~---~l~~i~~-~g---~v~ILAHPeRy~~~~~~~~~l~~l~~~G 157 (262)
T 3qy7_A 99 -LNDTKYI-----------L--IEFPFDHVPRYAEQ---LFYDLQL-KG---YIPVIAHPERNREIRENPSLLYHLVEKG 157 (262)
T ss_dssp -GGGSSEE-----------E--EECCTTCCCTTHHH---HHHHHHH-TT---CEEEEECGGGCHHHHHCTHHHHHHHHTT
T ss_pred -ECCceEE-----------E--EeCCCccCHHHHHH---HHHHHHH-CC---CcEEEECCCccccccccHHHHHHHHHCC
Confidence 0000000 0 111110 1112222 2322222 12 2557788751 1345678889999
Q ss_pred cEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCCCC--CChHHHHHHHHcccCCCCCCCCCCC
Q 008993 402 IVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPVAD--INPLCAIRTAMKRIPPGWDNAWIPS 479 (547)
Q Consensus 402 ~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (547)
+.+.++..+.. ...+. ......+.+.+.|+.+.+|||+-... ...+......+.. .
T Consensus 158 ~~iEiN~~s~~-------g~~g~----~~~~~~~~~~~~gl~~~igSDaH~~~~r~~~~~~a~~~l~~-----------~ 215 (262)
T 3qy7_A 158 AASQITSGSLA-------GIFGK----QLKAFSLRLVEANLIHFVASDAHNVKTRNFHTQEALYVLEK-----------E 215 (262)
T ss_dssp CEEEEEHHHHH-------TTTCH----HHHHHHHHHHHTTCCCEEECCBCSSSSSCCCHHHHHHHHHH-----------H
T ss_pred CEEEEECCccC-------cccch----HHHHHHHHHHhCCCeEEEEccCCCCCCCCchHHHHHHHHHH-----------H
Confidence 87766654321 11121 11234678889999999999964432 1223333322211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHcccC
Q 008993 480 ERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 480 ~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.|. ..+-+ ...||.+++.-+
T Consensus 216 ~G~--~~a~~-~~~n~~~il~~~ 235 (262)
T 3qy7_A 216 FGS--ELPYM-LTENAELLLRNQ 235 (262)
T ss_dssp HCS--HHHHH-HHHHHHHHHTTC
T ss_pred hCH--HHHHH-HHHHHHHHHCCC
Confidence 122 23334 568999988643
No 100
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=72.91 E-value=44 Score=32.63 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCccEEEeCccCCCCcc-cccchhHHHHHHHHHhh
Q 008993 241 SVDERREALLRASNLALSRGVTTVVDFGRYYPGES-VQLSWEDFADVYQWASY 292 (547)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 292 (547)
+.++..+.+++.++...+.|+.+++-...+..+.. ...+.++..+.++....
T Consensus 143 ~~~~~~~~~~~~l~~~~~~g~~gfksv~~~~~gl~~~~~~~~~a~~~~~~~~~ 195 (376)
T 2qpx_A 143 NFAAWWQAFSNDVKQAKAHGFVGFKSIAAYRVGLHLEPVNVIEAAAGFDTWKH 195 (376)
T ss_dssp SHHHHHHHHHHHHHTTTTTTCCCEEECHHHHTCSCCCCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCCCceeccceEecCCCCCCCCCHHHHHHHHHHHHc
Confidence 56667777888888888889888877432222322 11233444445544443
No 101
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=72.27 E-value=43 Score=31.55 Aligned_cols=54 Identities=19% Similarity=0.278 Sum_probs=36.2
Q ss_pred HHHHHHC-CC-eeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 434 FQSLLAN-NA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 434 ~~~l~~~-Gv-~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
++.+.+. |. ++.+|||+|.... - .....+ .+.+++.++.-+..+.|+++.+|++
T Consensus 270 ~~~~~~~~g~dril~gSD~P~~~~--~-~~~~~~------------~~~~l~~~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 270 LIDAILEIGADRILFSTDWPFENI--D-HASDWF------------NATSIAEADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp HHHHHTTTCGGGEECCCCTTTSCH--H-HHHHHH------------HHSSSCHHHHHHHHTHHHHHHTTCC
T ss_pred HHHHHHHhCcccEEEecCCCCccH--H-HHHHHH------------HHCCCCHHHHHHHHHHhHHHHhCCC
Confidence 4555554 44 7999999987532 1 221111 1126899999999999999999874
No 102
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=67.55 E-value=50 Score=30.72 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=35.0
Q ss_pred HHHHHHC-CC-eeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 434 FQSLLAN-NA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 434 ~~~l~~~-Gv-~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
++.+.+. |. ++.+|||+|.............+. .-.+++.++.-+....|+++.+|+
T Consensus 249 l~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~l~-----------~~~~l~~~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 249 LPTLMSLAQPEHLLYGSDIPYTPLDGSRQLGHALA-----------TTDLLTNEQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHTTTSCGGGEECCCCTTTSCHHHHHHHHHHHH-----------HCTTSCHHHHHHHHTHHHHHHHHC
T ss_pred HHHHHHhcCcccEEEecCCCCCCchhHHHHHHHHh-----------hccCCCHHHHHHHHHHHHHHHhCc
Confidence 4445543 44 789999998765433222222221 112588888888888888888764
No 103
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=51.43 E-value=1.7e+02 Score=28.05 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=34.5
Q ss_pred HCCC-eeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 439 ANNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 439 ~~Gv-~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
..|. ++.+|||.|.......... ....+++.++.-+....|+++.+|++.
T Consensus 305 ~~g~drilfgSD~P~~~~~~~~~~---------------~~~~~l~~~~~~~i~~~NA~rl~~l~~ 355 (357)
T 3nur_A 305 EVGIDRILYAADYPYIEPEKLGVF---------------LDELGLTDEEKEKISYTNGAKLLGLSS 355 (357)
T ss_dssp HHCGGGBCBCCCTTTCCCTTHHHH---------------TTSSCCCHHHHHHHHTHHHHHHHTC--
T ss_pred HcCCceEEEeCCCCCCCchHHHHH---------------HHHcCCCHHHHHHHHhHHHHHHhCCCC
Confidence 3454 7899999998765533211 123368999888888999999999863
No 104
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=50.53 E-value=1.4e+02 Score=26.77 Aligned_cols=66 Identities=15% Similarity=0.118 Sum_probs=39.6
Q ss_pred CceEeecCCC-----ChhHHHHHHhCCcEEEecCccc--cCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCCC
Q 008993 380 RFRIEHAQHL-----ASGTAARFGDQGIVASMQPQHL--LDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWPV 452 (547)
Q Consensus 380 ~~~i~H~~~~-----~~~~l~~~~~~g~~~~~~p~~~--~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~~ 452 (547)
...+.|.... .++.++.+++.|+.+.++..+. .. ..|.... ....-.+.+.+.|+.+.+|||+-.
T Consensus 135 ~~vlaHp~r~~~~~~~~~~l~~l~~~G~~lEiN~~s~~~~~-------~~g~~~~-~~~~~~~~~~~~gl~~~~GSDaH~ 206 (247)
T 2wje_A 135 TPVIAHIERYDALENNEKRVRELIDMGCYTQVNSSHVLKPK-------LFGERYK-FMKKRAQYFLEQDLVHVIASDMHN 206 (247)
T ss_dssp EEEETTGGGCGGGTTCHHHHHHHHHTTCEEEEEHHHHSCCC-------SSCCSCH-HHHHHHHHHHHTTCCSEEECCBCC
T ss_pred cEEEEehhhHHHHhhCHHHHHHHHHCCCEEEEecHhhHhcC-------CCCCcCh-HHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4466776522 3567888999998877664432 10 1120000 111235677899999999999754
Q ss_pred C
Q 008993 453 A 453 (547)
Q Consensus 453 ~ 453 (547)
.
T Consensus 207 ~ 207 (247)
T 2wje_A 207 L 207 (247)
T ss_dssp S
T ss_pred C
Confidence 3
No 105
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=45.56 E-value=2.2e+02 Score=27.53 Aligned_cols=47 Identities=15% Similarity=0.070 Sum_probs=31.9
Q ss_pred CCC-eeeecCCCCCCCCChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHccc
Q 008993 440 NNA-LLALGSDWPVADINPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFL 501 (547)
Q Consensus 440 ~Gv-~~~~GTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl 501 (547)
.|. ++.+|||.|......... .+ ...+++.++.-+....|+++.+|+
T Consensus 326 ~g~drilfgSD~P~~~~~~~~~---~l------------~~~~l~~e~~~~I~~~NA~rlf~L 373 (373)
T 4inf_A 326 MGEDRVMYAMDYPYQYVADEVR---AM------------DAMDMSAQTKKKFFQTNAEKWFKL 373 (373)
T ss_dssp HCGGGEECCCCTTTTCCHHHHH---HH------------HTCSCCHHHHHHHHTHHHHHHTTC
T ss_pred cCcceEEEecCCCCCccHHHHH---HH------------HhCCCCHHHHHHHHhHHHHHHhCc
Confidence 344 789999998865532211 11 123688888888888888888875
No 106
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=35.04 E-value=2.8e+02 Score=25.80 Aligned_cols=51 Identities=18% Similarity=-0.022 Sum_probs=32.4
Q ss_pred CCC-eeeecCCCCCCC-C-ChHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccC
Q 008993 440 NNA-LLALGSDWPVAD-I-NPLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLE 502 (547)
Q Consensus 440 ~Gv-~~~~GTD~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~ 502 (547)
.|. ++.+|||.|... . .........+ .+.+++.++.-+....|+++.+|-.
T Consensus 253 ~g~drilfgSD~P~~~~p~~~~~~~~~~l------------~~l~l~~~~~~~i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 253 YGIDHVLFGTDAPFAVMPSGADQIITQAI------------NDLTISDKDKQKIFHDNYYSLIKEG 306 (312)
T ss_dssp HCGGGEECCCCBTSSSTTTCSHHHHHHHH------------HTSSSCHHHHHHHHTHHHHHHHCC-
T ss_pred CCCCeEEEeCCCCCCcCCCcchHHHHHHH------------HHcCCCHHHHHHHHHHHHHHHHhCc
Confidence 454 789999998864 1 1122222222 1226898888888888888888754
No 107
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=34.22 E-value=2.3e+02 Score=25.38 Aligned_cols=50 Identities=16% Similarity=0.090 Sum_probs=29.9
Q ss_pred HHHHHHhCCcEEEecCccccCChhHHHHhhChhhhhhhchHHHHHHHCCCeeeecCCCC
Q 008993 393 TAARFGDQGIVASMQPQHLLDDADSARKKLGVDRAERESYLFQSLLANNALLALGSDWP 451 (547)
Q Consensus 393 ~l~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~Gv~~~~GTD~~ 451 (547)
.++.+++.|+.+.++....... .+... ....-++.+.+.|+++++|||+-
T Consensus 177 ~l~~~~~~g~~iEvn~~~~~~~-------~~~~~--~~~~~~~~~~~~g~~~~~gSDaH 226 (267)
T 2yxo_A 177 ALRAVAEAGLFLDVNTAGLRRP-------AKEVY--PAPALLRRARELGIGLVLGSDAH 226 (267)
T ss_dssp HHHHHHHHTCEEEEEGGGGGST-------TCSCB--SCHHHHHHHHHHTCCEEEECCBS
T ss_pred HHHHHHHcCCEEEEEchHhcCC-------CCCCC--CCHHHHHHHHHcCCCEEEecCCC
Confidence 3566777888777765432110 11000 11123677889999999999964
No 108
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=32.58 E-value=3e+02 Score=25.38 Aligned_cols=61 Identities=26% Similarity=0.445 Sum_probs=35.9
Q ss_pred HHHHHH-CCC-eeeecCCCCCCCCC-hHHHHHHHHcccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcccCC
Q 008993 434 FQSLLA-NNA-LLALGSDWPVADIN-PLCAIRTAMKRIPPGWDNAWIPSERISLTDALIAHTLSAARACFLEN 503 (547)
Q Consensus 434 ~~~l~~-~Gv-~~~~GTD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~aT~n~A~~lgl~~ 503 (547)
++.+++ .|. ++.+|||.|..... .+......+.. | ...+++.++.=+....|+++.+|++.
T Consensus 227 ~~~~~~~~G~dri~fgSD~P~~~~~~~~~~~~~~~~~--------~-~~~~l~~~~~~~i~~~Na~rl~~l~~ 290 (303)
T 4do7_A 227 LDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVER--------W-AESRLSAAERSALWGGTAARCYALPE 290 (303)
T ss_dssp HHHHHHHHCGGGEEECCCBTGGGGTCCHHHHHHHHHH--------H-HHHHCCHHHHHHHTTHHHHHHTTCC-
T ss_pred HHHHHHHhCcccEEEeCCCCCCcCcCCHHHHHHHHHH--------H-HhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 444444 355 79999999876432 22222222211 0 00146888777777889999999863
No 109
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=27.78 E-value=3.2e+02 Score=26.25 Aligned_cols=131 Identities=14% Similarity=0.105 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHhCCccEEEeCccCCCCcccccchhHHHHHHHHHhh--CCCCeeEEEEccCccchhhHHHHHHhcCCCCC
Q 008993 247 EALLRASNLALSRGVTTVVDFGRYYPGESVQLSWEDFADVYQWASY--SEKMKIRVCLFFPLETWSSLADLINKTGHVLS 324 (547)
Q Consensus 247 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (547)
+.+++.++++.+.|+.++.-.+.. |-...-+.++-.++++...+ .+++++-+ ........+..+..+.......
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GTT--GE~~~Ls~eEr~~vi~~~ve~~~grvpVia--Gvg~~st~eai~la~~A~~~Ga 155 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGTT--GEGQLMSWDEHIMLIGHTVNCFGGSIKVIG--NTGSNSTREAIHATEQGFAVGM 155 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTT--TTGGGSCHHHHHHHHHHHHHHHTTTSEEEE--ECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEecccc--cChhhCCHHHHHHHHHHHHHHhCCCCeEEE--ecCCCCHHHHHHHHHHHHHcCC
Confidence 456666888889999988876643 33333355566666655443 24455443 3333333343333332221111
Q ss_pred CcEEEceEEEEEcCCcCcchhhhhceeEEecccHHHHHHHHHHHHHHHhcCCCCCCceEee-----cCCCChhHHHHHHh
Q 008993 325 DWVYLGGVKAFADGSLGSNSALFHEVAIHAIGDRANDLVLDMYKSVVVTTGKRDQRFRIEH-----AQHLASGTAARFGD 399 (547)
Q Consensus 325 ~~~~~~~~~~~~d~~~~~~~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H-----~~~~~~~~l~~~~~ 399 (547)
+.+. +..--....+.+.+.+.+++..... ...+-+ +..++.+.+.++++
T Consensus 156 davl---------------------vv~PyY~k~sq~gl~~hf~~IA~a~-----PiilYNiP~rTg~~ls~e~l~~La~ 209 (360)
T 4dpp_A 156 HAAL---------------------HINPYYGKTSIEGLIAHFQSVLHMG-----PTIIYNVPGRTGQDIPPRAIFKLSQ 209 (360)
T ss_dssp SEEE---------------------EECCCSSCCCHHHHHHHHHTTGGGS-----CEEEEECHHHHSCCCCHHHHHHHTT
T ss_pred CEEE---------------------EcCCCCCCCCHHHHHHHHHHHHHhC-----CEEEEeCCcccCCCCCHHHHHHHhc
Confidence 1110 0111112223445555565554432 334444 34678889999887
Q ss_pred CCcEEEec
Q 008993 400 QGIVASMQ 407 (547)
Q Consensus 400 ~g~~~~~~ 407 (547)
..-.+.+.
T Consensus 210 ~pnIvGIK 217 (360)
T 4dpp_A 210 NPNLAGVK 217 (360)
T ss_dssp STTEEEEE
T ss_pred CCCEEEEE
Confidence 66554444
No 110
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=26.53 E-value=3.5e+02 Score=24.15 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=25.9
Q ss_pred CceEeecCCCChhHHHHHHhCCcEEEecCcc
Q 008993 380 RFRIEHAQHLASGTAARFGDQGIVASMQPQH 410 (547)
Q Consensus 380 ~~~i~H~~~~~~~~l~~~~~~g~~~~~~p~~ 410 (547)
...+.++..++.++++...+.|..+.+.|..
T Consensus 85 ~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~~ 115 (232)
T 4e38_A 85 EMLIGAGTILNGEQALAAKEAGATFVVSPGF 115 (232)
T ss_dssp TCEEEEECCCSHHHHHHHHHHTCSEEECSSC
T ss_pred CCEEeECCcCCHHHHHHHHHcCCCEEEeCCC
Confidence 3577788888999999999999988888874
No 111
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=25.84 E-value=13 Score=35.22 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=12.3
Q ss_pred ecccccccccccccc
Q 008993 102 VPGFIDSHVHFIPGG 116 (547)
Q Consensus 102 ~PGlID~H~H~~~~~ 116 (547)
|+++||+|+|++...
T Consensus 1 m~~~ID~H~H~~~~~ 15 (327)
T 2dvt_A 1 MQGKVALEEHFAIPE 15 (327)
T ss_dssp CCSEEEEEEEECCHH
T ss_pred CCCeEEEecccCCHH
Confidence 578999999997553
No 112
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=23.58 E-value=4.4e+02 Score=24.31 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=35.2
Q ss_pred HHHHHHCC-CeeeecCCCCCCCCC----hHHHHHHHHcccCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHcccCCCcc
Q 008993 434 FQSLLANN-ALLALGSDWPVADIN----PLCAIRTAMKRIPPGWDNAWIPSERI-SLTDALIAHTLSAARACFLENDVG 506 (547)
Q Consensus 434 ~~~l~~~G-v~~~~GTD~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~al~~aT~n~A~~lgl~~~~G 506 (547)
++.+.+.+ =++.+|||.|..... -+..+...+.. .+ +.++-=+..-.|+++.+|++..-|
T Consensus 232 ~~~~~~~~~dRlmfGSDwP~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~il~~NA~rly~~~~~~~ 297 (303)
T 4d9a_A 232 VAPLVADYADRVIWGTAWPHPNMQDAIPDDGLVVDMIPR-------------IAPTPELQHKMLVTNPMRLYWSEEMEG 297 (303)
T ss_dssp HHHHHHHTTTSEECCCCTTCTTCTTSCCCHHHHHHTHHH-------------HSCSHHHHHHHHTHHHHHHHCGGGC--
T ss_pred HHHHHHhCcccEEEecCCCCcccccCCCCHHHHHHHHHH-------------HCCCHHHHHHHHHHHHHHHhCCCcccc
Confidence 44555544 379999999986542 12222222211 13 455556667789999999876443
No 113
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=22.22 E-value=49 Score=31.07 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=24.5
Q ss_pred eeeccccccccccccccccccc----cccCCCCCHHHHHHHHHHH
Q 008993 100 VVVPGFIDSHVHFIPGGLQMAR----VKLRGVSHKDEFVRRVKEA 140 (547)
Q Consensus 100 ~v~PGlID~H~H~~~~~~~~~~----~~~~g~~t~~~~~~~~~~~ 140 (547)
.+=||.||+|.|++.....+.. ...+.-.+.+++++.+.+.
T Consensus 22 ~~p~~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~ 66 (303)
T 4d9a_A 22 TPPPGAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHL 66 (303)
T ss_dssp CCCTTCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHH
T ss_pred CCCCCceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHc
Confidence 3456999999999974311111 1122345677777776654
Done!