BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008995
(547 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 247/513 (48%), Gaps = 48/513 (9%)
Query: 42 LGYLYGPYC----KVRRVPGPPPIPLVGHIPLLARYGPEVFSV-LAKRYGPIFRFHMGRQ 96
+ YLYG + K +PGP P+P +G+I L G +F + K+YG ++ F+ G+Q
Sbjct: 1 MAYLYGTHSHGLFKKLGIPGPTPLPFLGNI-LSYHKGFCMFDMECHKKYGKVWGFYDGQQ 59
Query: 97 PLIIVADPELCREVGIKK-FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSF 155
P++ + DP++ + V +K+ + NR P+ + + D +W +R+ +
Sbjct: 60 PVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG---FMKSAISIAEDEEWKRLRSLLSPT 116
Query: 156 YQPTHLASLVPTMQSIIESATQNI--ESSKVENITFSNLALTLATDTIGQAAFGVNFGLS 213
+ L +VP + + +N+ E+ + +T ++ + D I +FGVN
Sbjct: 117 FTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSL 176
Query: 214 SKPESITDSIGIADNQRDGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFR 273
+ P+ +N + DF++ S T PF
Sbjct: 177 NNPQD-----PFVENTKK-LLRFDFLDPFFLSITVF---------------------PFL 209
Query: 274 QILKRIPGTMDWKVERTN--QKLSGRLDEIVFKRMKESKQGSKDLLSLIVKAREL-ETES 330
+ + + E TN +K R+ E R++++++ D L L++ ++ ETES
Sbjct: 210 IPILEVLNICVFPREVTNFLRKSVKRMKE---SRLEDTQKHRVDFLQLMIDSQNSKETES 266
Query: 331 KNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPT 390
+ + A + + AG TTS LS I+Y +A HP+V+ KL EID P + PT
Sbjct: 267 HKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT 326
Query: 391 ALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDS 450
D + YLD V+ E +R++ ++ + R K+VEI G +PKG V + + +D
Sbjct: 327 -YDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 385
Query: 451 KNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
K + EP+KF PERF ++ P Y PFG GPR CIG +FA+ +KL+LI + +N+
Sbjct: 386 KYWTEPEKFLPERFSKKNKD--NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNF 443
Query: 511 VFRHSPDMENPLELEFGIILNFKHGVKLRVLSR 543
F+ + + PL+L G +L + V L+V SR
Sbjct: 444 SFKPCKETQIPLKLSLGGLLQPEKPVVLKVESR 476
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 44/496 (8%)
Query: 55 VPGPPPIPLVGHIPLLARYGPEVFSV-LAKRYGPIFRFHMGRQPLIIVADPELCREVGIK 113
+PGP P+P +G+I L G +F + K+YG ++ F+ G+QP++ + DP++ + V +K
Sbjct: 16 IPGPTPLPFLGNI-LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 74
Query: 114 K-FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ + NR P+ + + D +W +R+ + + L +VP +
Sbjct: 75 ECYSVFTNRRPFGPVG---FMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYG 131
Query: 173 ESATQNI--ESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQR 230
+ +N+ E+ + +T ++ + D I +FGVN + P+ +N +
Sbjct: 132 DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQD-----PFVENTK 186
Query: 231 DGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERT 290
DF++ S T PF + + + E T
Sbjct: 187 K-LLRFDFLDPFFLSITVF---------------------PFLIPILEVLNICVFPREVT 224
Query: 291 N--QKLSGRLDEIVFKRMKESKQGSKDLLSLIVKAREL-ETESKNVFTPDYISAVTYEHL 347
N +K R+ E R++++++ D L L++ ++ ETES + + A + +
Sbjct: 225 NFLRKSVKRMKE---SRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFI 281
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKE 407
AG TTS LS I+Y +A HP+V+ KL EID P + PT D + YLD V+ E
Sbjct: 282 FAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT-YDTVLQMEYLDMVVNE 340
Query: 408 AMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPN 467
+R++ ++ + R K+VEI G +PKG V + + +D K + EP+KF PERF
Sbjct: 341 TLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 400
Query: 468 CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFG 527
++ P Y PFG GPR CIG +FA+ +KL+LI + +N+ F+ + + PL+L G
Sbjct: 401 NKD--NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLG 458
Query: 528 IILNFKHGVKLRVLSR 543
+L + V L+V SR
Sbjct: 459 GLLQPEKPVVLKVESR 474
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 44/496 (8%)
Query: 55 VPGPPPIPLVGHIPLLARYGPEVFSV-LAKRYGPIFRFHMGRQPLIIVADPELCREVGIK 113
+PGP P+P +G+I L G +F + K+YG ++ F+ G+QP++ + DP++ + V +K
Sbjct: 17 IPGPTPLPFLGNI-LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 75
Query: 114 K-FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ + NR P+ + + D +W +R+ + + L +VP +
Sbjct: 76 ECYSVFTNRRPFGPVG---FMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYG 132
Query: 173 ESATQNI--ESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQR 230
+ +N+ E+ + +T ++ + D I +FGVN + P+ +N +
Sbjct: 133 DVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQD-----PFVENTK 187
Query: 231 DGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERT 290
DF++ S T PF + + + E T
Sbjct: 188 K-LLRFDFLDPFFLSITVF---------------------PFLIPILEVLNICVFPREVT 225
Query: 291 N--QKLSGRLDEIVFKRMKESKQGSKDLLSLIVKAREL-ETESKNVFTPDYISAVTYEHL 347
N +K R+ E R++++++ D L L++ ++ ETES + + A + +
Sbjct: 226 NFLRKSVKRMKE---SRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFI 282
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKE 407
AG TTS LS I+Y +A HP+V+ KL EID P + PT D + YLD V+ E
Sbjct: 283 FAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPT-YDTVLQMEYLDMVVNE 341
Query: 408 AMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPN 467
+R++ ++ + R K+VEI G +PKG V + + +D K + EP+KF PERF
Sbjct: 342 TLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKK 401
Query: 468 CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFG 527
++ P Y PFG GPR CIG +FA+ +KL+LI + +N+ F+ + + PL+L G
Sbjct: 402 NKD--NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLG 459
Query: 528 IILNFKHGVKLRVLSR 543
+L + V L+V SR
Sbjct: 460 GLLQPEKPVVLKVESR 475
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 213/493 (43%), Gaps = 64/493 (12%)
Query: 56 PGPPPIPLVGHI-PLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G++ L + P+ F+ LA+R+GP+F ++G Q ++++ + +E +
Sbjct: 13 PGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDY 72
Query: 115 FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSIIES 174
+ R A +G+ F W +R L+ T+++
Sbjct: 73 KDEFSGRGDLPAFHAH--RDRGIIFNNGPTWKDIRRFSLT------------TLRNYGMG 118
Query: 175 ATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIAD----NQR 230
N + E ++ L T GQ F F + P ++ I N
Sbjct: 119 KQGNESRIQRE----AHFLLEALRKTQGQP-FDPTFLIGCAPCNVIADILFRKHFDYNDE 173
Query: 231 DGTAVLDFINQ--HIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVE 288
++ N+ H+ ST L++ F L +PG+
Sbjct: 174 KFLRLMYLFNENFHLLSTPWLQL-----------------YNNFPSFLHYLPGS-----H 211
Query: 289 RTNQKLSGRLDEIVFKRMKESKQG-----SKDLLSLIVKARELETES-KNVFTPDYISAV 342
R K + E V +R+KE Q +DL ++ E E S + ++T D I+
Sbjct: 212 RKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVT 271
Query: 343 TYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYL 401
+ AG+ TTS L + ++ +PE+E KL EID GP + A+ +Q+ PY+
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRI--PAIKDRQEMPYM 329
Query: 402 DQVIKEAMR-IYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFK 460
D V+ E R I LV + E ++ GY +PKGT V L V D++ FP+P+KFK
Sbjct: 330 DAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFK 389
Query: 461 PERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMEN 520
PE F E K ++ + PF G R C G+ A E+ L L + +++ + D ++
Sbjct: 390 PEHF--LNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKD 447
Query: 521 ----PLELEFGII 529
P+ + FG I
Sbjct: 448 IDLSPIHIGFGCI 460
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 212/496 (42%), Gaps = 36/496 (7%)
Query: 61 IPLVGHIPLLARYGP--EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKKFKDI 118
+PLVG +P L R+G F L K+YGPI+ MG + +IV +L +EV IKK KD
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 119 PNRSVPSPIAASPLHQKGLFFTRDG-KWSAMRNTILSFYQPTHLASLVPTMQSIIESATQ 177
R + + + ++KG+ F G W R ++ + ++ + Q
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATF-------------ALFKDGDQ 122
Query: 178 NIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTAVLD 237
+E + I S L LAT GQ+ ++F + ++ I + ++G L+
Sbjct: 123 KLEKIICQEI--STLCDMLATHN-GQS-IDISFPVFVAVTNVISLICFNTSYKNGDPELN 178
Query: 238 FI-NQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQKLSG 296
I N + L D E + +K ++ +E +K
Sbjct: 179 VIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRS 238
Query: 297 RLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSF 356
+ + ++K S + + + + ++I + AG TT+
Sbjct: 239 DSITNMLDTLMQAKMNSDN-------GNAGPDQDSELLSDNHILTTIGDIFGAGVETTTS 291
Query: 357 ALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSP 416
+ + + +P+V+ KL EID PT D + + L+ I+E +R+ V+P
Sbjct: 292 VVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD-RNRLLLLEATIREVLRLRPVAP 350
Query: 417 LVARETAK-EVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRH 475
++ A + IG + + KGT V + L + + K + +PD+F PERF
Sbjct: 351 MLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISP 410
Query: 476 PCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR-----HSPDMENPLELEFGIIL 530
+YLPFG GPR+CIG+ A QE+ L + L + + P +E ++ F +I
Sbjct: 411 SVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVF-LID 469
Query: 531 NFKHGVKLRVLSRTSR 546
+FK +K+R R ++
Sbjct: 470 SFKVKIKVRQAWREAQ 485
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 197/470 (41%), Gaps = 49/470 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAK---RYGPIFRFHMGRQPLIIVADPELCREVGI 112
PGP P+P +G+ L ++++ L K RYGP+F H+G + ++++ + RE +
Sbjct: 13 PGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ ++ R + G+ F+ + +R ++ T++
Sbjct: 71 DQAEEFSGRGEQATFDWV-FKGYGVVFSNGERAKQLRRFSIA------------TLRDF- 116
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
+ IE E F L A G A F LS ++ SI D
Sbjct: 117 GVGKRGIEERIQEEAGF----LIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDR---- 168
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ ++ S ++ + E F ++K +PG ++ Q
Sbjct: 169 ---FDYKDKEFLSLLRMMLGSFQFTSTSTGQLY----EMFSSVMKHLPGPQ----QQAFQ 217
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLL-SLIVKARELETESKNVFTPDYISAVTYEH 346
L G L++ + K+++ +++ +D + S +++ +E E F + T
Sbjct: 218 LLQG-LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNL 276
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
AG+ T S L L+ HPEVE K+ EID + P D + K PY++ VI
Sbjct: 277 FFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED-RAKMPYMEAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E R V P+ +AR K+ + + LPKGT V+ LG V +D F P F P+ F
Sbjct: 336 EIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF- 394
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHS 515
E+ + + A++PF IG R C G+ A E+ L + +N+ + S
Sbjct: 395 -LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS 443
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 198/470 (42%), Gaps = 49/470 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAK---RYGPIFRFHMGRQPLIIVADPELCREVGI 112
PGP P+P +G+ L ++++ L K RYGP+F H+G + ++++ + RE +
Sbjct: 13 PGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ ++ R + G+ F+ + +R ++ T++
Sbjct: 71 DQAEEFSGRGEQATFDWV-FKGYGVVFSNGERAKQLRRFSIA------------TLRDF- 116
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
+ IE E F L A G A F LS ++ SI D
Sbjct: 117 GVGKRGIEERIQEEAGF----LIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDR---- 168
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ ++ S ++ + E F ++K +PG ++ Q
Sbjct: 169 ---FDYKDKEFLSLLRMMLGIFQFTSTSTGQLY----EMFSSVMKHLPGPQ----QQAFQ 217
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLL-SLIVKARELETESKNVFTPDYISAVTYEH 346
L G L++ + K+++ +++ +D + S +++ +E E F + T +
Sbjct: 218 LLQG-LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQL 276
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
+ G+ T S L L+ HPEVE K+ EID + P D + K PY++ VI
Sbjct: 277 FIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED-RAKMPYMEAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E R V P+ +AR K+ + + LPKGT V+ LG V +D F P F P+ F
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF- 394
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHS 515
E+ + + A++PF IG R C G+ A E+ L + +N+ + S
Sbjct: 395 -LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS 443
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 198/470 (42%), Gaps = 49/470 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAK---RYGPIFRFHMGRQPLIIVADPELCREVGI 112
PGP P+P +G+ L ++++ L K RYGP+F H+G + ++++ + RE +
Sbjct: 13 PGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ ++ R + G+ F+ + +R ++ T++
Sbjct: 71 DQAEEFSGRGEQATFDWV-FKGYGVVFSNGERAKQLRRFSIA------------TLRDF- 116
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
+ IE E F L A G A F LS ++ SI D
Sbjct: 117 GVGKRGIEERIQEEAGF----LIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDR---- 168
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ ++ S ++ + E F ++K +PG ++ Q
Sbjct: 169 ---FDYKDKEFLSLLRMMLGIFQFTSTSTGQLY----EMFSSVMKHLPGPQ----QQAFQ 217
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLL-SLIVKARELETESKNVFTPDYISAVTYEH 346
L G L++ + K+++ +++ +D + S +++ +E E F + T +
Sbjct: 218 CLQG-LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQL 276
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
+ G+ T S L L+ HPEVE K+ EID + P D + K PY++ VI
Sbjct: 277 FIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED-RAKMPYMEAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E R V P+ +AR K+ + + LPKGT V+ LG V +D F P F P+ F
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF- 394
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHS 515
E+ + + A++PF IG R C G+ A E+ L + +N+ + S
Sbjct: 395 -LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS 443
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 198/470 (42%), Gaps = 49/470 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAK---RYGPIFRFHMGRQPLIIVADPELCREVGI 112
PGP P+P +G+ L ++++ L K RYGP+F H+G + ++++ + RE +
Sbjct: 13 PGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ ++ R + G+ F+ + +R ++ T++
Sbjct: 71 DQAEEFSGRGEQATFDWV-FKGYGVVFSNGERAKQLRRFSIA------------TLRDF- 116
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
+ IE E F L A G A F LS ++ SI D
Sbjct: 117 GVGKRGIEERIQEEAGF----LIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDR---- 168
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ ++ S ++ + E F ++K +PG ++ Q
Sbjct: 169 ---FDYKDKEFLSLLRMMLGIFQFTSTSTGQLY----EMFSSVMKHLPGPQ----QQAFQ 217
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLL-SLIVKARELETESKNVFTPDYISAVTYEH 346
L G L++ + K+++ +++ +D + S +++ +E E F + T +
Sbjct: 218 LLQG-LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQL 276
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
+ G+ T S L L+ HPEVE K+ EID + P D + K PY++ VI
Sbjct: 277 FVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED-RAKMPYMEAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E R V P+ +AR K+ + + LPKGT V+ LG V +D F P F P+ F
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF- 394
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHS 515
E+ + + A++PF IG R C G+ A E+ L + +N+ + S
Sbjct: 395 -LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS 443
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 197/470 (41%), Gaps = 49/470 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAK---RYGPIFRFHMGRQPLIIVADPELCREVGI 112
PGP P+P +G+ L ++++ L K RYGP+F H+G + ++++ + RE +
Sbjct: 13 PGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALV 70
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ ++ R + G+ F+ + +R ++ T++
Sbjct: 71 DQAEEFSGRGEQATFDWV-FKGYGVVFSNGERAKQLRRFSIA------------TLRDF- 116
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
+ IE E F L A G A F LS ++ SI D
Sbjct: 117 GVGKRGIEERIQEEAGF----LIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDR---- 168
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ ++ S ++ + E F ++K +PG ++ Q
Sbjct: 169 ---FDYKDKEFLSLLRMMLGIFQFTSTSTGQLY----EMFSSVMKHLPGPQ----QQAFQ 217
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLL-SLIVKARELETESKNVFTPDYISAVTYEH 346
L G L++ + K+++ +++ +D + S +++ +E E F + T
Sbjct: 218 LLQG-LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNL 276
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
+ G+ T S L L+ HPEVE K+ EID + P D + K PY++ VI
Sbjct: 277 FIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED-RAKMPYMEAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E R V P+ +AR K+ + + LPKGT V+ LG V +D F P F P+ F
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF- 394
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHS 515
E+ + + A++PF IG R C G+ A E+ L + +N+ + S
Sbjct: 395 -LNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS 443
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 192/476 (40%), Gaps = 54/476 (11%)
Query: 47 GPYCKVRRVPGPPPIPLVGHIPLLARYG-----PEVFSVLAKRYGPIFRFHMGRQPLIIV 101
G V +PGP PL+G + + G + + K+YG IFR +G + +
Sbjct: 18 GETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHL 77
Query: 102 ADPELCREVGIKKFKDIPNRSVPSPIAASPLHQK---GLFFTRDGKWSAMRNTILS-FYQ 157
P L E + P R P A H+ GL +W +R+ +
Sbjct: 78 GSPSLL-EALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMK 136
Query: 158 PTHLASLVPTMQSIIESATQNIESSKVENITFSNLALTL---ATDTIGQAAFGVNFGLSS 214
P + L + ++ + ++ E +L L + ++I + FGL
Sbjct: 137 PVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQ 196
Query: 215 KPESITDSIGIADNQRDGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQ 274
K + + + + I + + ++ + +
Sbjct: 197 K-----------ETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDT 245
Query: 275 ILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVF 334
I K + +D +++R +Q Q D L I + L +
Sbjct: 246 IFKSVKPCIDNRLQRYSQ------------------QPGADFLCDIYQQDHLSKK----- 282
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+ +AVT E LA TT+ +L I+Y ++ +P+ + +LL E+ P P A DL
Sbjct: 283 --ELYAAVT-ELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDL 339
Query: 395 QQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFP 454
+ PYL +KE+MR+ P R K +G Y LPKGT + L V+ NF
Sbjct: 340 RN-MPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFE 398
Query: 455 EPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ KF+PER+ ++ K+ +P A+LPFGIG R CIG++ A ++ L+L + + Y
Sbjct: 399 DSHKFRPERW---LQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY 451
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 193/471 (40%), Gaps = 37/471 (7%)
Query: 54 RVPGPPPIPLVGHIPLLA-RYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGI 112
R PGP P+P++G+I + + + + L+K YGP+F + G +P++++ E +E I
Sbjct: 10 RPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 69
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
++ R + P+A G+ F+ KW +R L + + + I
Sbjct: 70 DLGEEFSGRGI-FPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMG------KRSI 122
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
E Q VE + + + T +G A P ++ SI
Sbjct: 123 EDRVQEEARCLVEELRKTKASPCDPTFILGCA-----------PCNVICSIIFHKR---- 167
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ +Q + M+ F +L PGT + ++
Sbjct: 168 ---FDYKDQQFLNL----MEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAF 220
Query: 293 KLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESK-NVFTPDYISAVTYEHLLAGS 351
S L+++ + +D + + E E ++ + FT + + + AG+
Sbjct: 221 MKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGT 280
Query: 352 ATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMR- 410
TTS L + L+ HPEV K+ EI+ R P D + PY D V+ E R
Sbjct: 281 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQD-RSHMPYTDAVVHEVQRY 339
Query: 411 IYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCE 469
I L+ + +++ Y +PKGT + ++L V D+K FP P+ F P F D
Sbjct: 340 IDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGN 399
Query: 470 EAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMEN 520
K ++ ++PF G R C+G+ A E+ L L + +N+ + D +N
Sbjct: 400 FKKSKY---FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKN 447
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 201/463 (43%), Gaps = 72/463 (15%)
Query: 71 ARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCRE--VGIKKFKDIPNRSVPSPIA 128
R +VF AK+YGP+ R ++ + +IV PE ++ + K KD +
Sbjct: 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVF 68
Query: 129 ASPLHQKGLFFTRD-GKWSAMRNTI-LSFYQPTHLASLVPTMQSIIESATQNIE--SSKV 184
L +GL + +W R I L+F + +SLV M++ E A Q +E +K
Sbjct: 69 GERLFGQGLVSECNYERWHKQRRVIDLAFSR----SSLVSLMETFNEKAEQLVEILEAKA 124
Query: 185 EN---ITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTAVLDFINQ 241
+ ++ ++ A D + +AAFG+ T++L +
Sbjct: 125 DGQTPVSMQDMLTYTAMDILAKAAFGME-----------------------TSMLLGAQK 161
Query: 242 HIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRI----PGTMDWKVERTNQKLSGR 297
+ +L ++ ++ R++ + I DW V+R + L
Sbjct: 162 PLSQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDW-VQRRREAL--- 217
Query: 298 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFA 357
K ++ D+L+ I+KA E + + + + VT+ +AG T++
Sbjct: 218 ---------KRGEEVPADILTQILKAEEGAQDDEGLLD----NFVTF--FIAGHETSANH 262
Query: 358 LSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTA--LDLQQ--KFPYLDQVIKEAMRIYL 413
L+ V ++ PE+ +L AE+D E++ + LD + + YL QV+KE++R+Y
Sbjct: 263 LAFTVMELSRQPEIVARLQAEVD-----EVIGSKRYLDFEDLGRLQYLSQVLKESLRLYP 317
Query: 414 VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQ 473
+ R +E I G R+P T + + V+ + F +P F P+RF P + +
Sbjct: 318 PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPR- 376
Query: 474 RHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSP 516
Y PF +G R+CIGQ+FA E+K+ + L + FR P
Sbjct: 377 ---FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVP 416
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 195/476 (40%), Gaps = 51/476 (10%)
Query: 56 PGPPPIPLVGHIPLLA-RYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G+I + + + + L+K YGP+F + G +P++++ E +E I
Sbjct: 14 PGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDL 73
Query: 115 FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSIIES 174
++ R + P+A G+ F+ KW +R L + + + IE
Sbjct: 74 GEEFSGRGI-FPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMG------KRSIED 126
Query: 175 ATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTA 234
Q VE + + + T +G A V I ++R
Sbjct: 127 RVQEEARCLVEELRKTKASPCDPTFILGCAPCNV-------------ICSIIFHKRFDYK 173
Query: 235 VLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQKL 294
F+N +K+ P+ QI +D+ N+ L
Sbjct: 174 DQQFLNLMEKLNENIKI----------------LSSPWIQICNNFSPIIDYFPGTHNKLL 217
Query: 295 SGR--LDEIVFKRMKESKQ-----GSKDLLSLIVKARELETESK-NVFTPDYISAVTYEH 346
+ + +++KE ++ +D + + E E ++ + FT + + +
Sbjct: 218 KNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL 277
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
AG+ TTS L + L+ HPEV K+ EI+ R P D + PY D V+
Sbjct: 278 FGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQD-RSHMPYTDAVVH 336
Query: 407 EAMR-IYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF- 464
E R I L+ + +++ Y +PKGT + ++L V D+K FP P+ F P F
Sbjct: 337 EVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 396
Query: 465 DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMEN 520
D K ++ ++PF G R C+G+ A E+ L L + +N+ + D +N
Sbjct: 397 DEGGNFKKSKY---FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKN 449
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 195/468 (41%), Gaps = 49/468 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAK---RYGPIFRFHMGRQPLIIVADPELCREVGI 112
PGP P+P +G+ L ++++ L K RYGP+F H+G + ++++ + +E +
Sbjct: 13 PGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALV 70
Query: 113 KKFKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSII 172
+ ++ R + G+ F+ + +R ++ T++
Sbjct: 71 DQAEEFSGRGEQATFDWL-FKGYGVAFSNGERAKQLRRFSIA------------TLRGF- 116
Query: 173 ESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDG 232
+ IE E F L A A F LS ++ SI D
Sbjct: 117 GVGKRGIEERIQEEAGF----LIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDR---- 168
Query: 233 TAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQ 292
D+ ++ S ++ + E F ++K +PG ++ +
Sbjct: 169 ---FDYEDKEFLSLLRMMLGSFQFTATSTGQLY----EMFSSVMKHLPGPQ----QQAFK 217
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLL-SLIVKARELETESKNVFTPDYISAVTYEH 346
+L G L++ + K+++ +++ +D + S +++ +E E F + T
Sbjct: 218 ELQG-LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNL 276
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
AG+ T S L L+ HPEVE K+ EID + P D + K PY + VI
Sbjct: 277 FFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED-RAKMPYTEAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E R + P+ +A K+ + + LPKGT V+ LG V +D + F P F P+ F
Sbjct: 336 EIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL 395
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+ K+ A++PF IG R C G+ A E+ L + +N+ F+
Sbjct: 396 DKKGQFKKSD--AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFK 441
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 13/235 (5%)
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDY 338
+P T+ K +R L L++I+ R ++ +D L +++ AR+ + ++ P+
Sbjct: 188 LPNTLFGKSQRARALLLAELEKIIKARQQQPP-SEEDALGILLAARDDNNQPLSL--PEL 244
Query: 339 ISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFG-PRELVPTALDLQQK 397
+ L AG T + ALSS L+ H ++ ++ E + +EL L +K
Sbjct: 245 KDQILL-LLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETL---KK 300
Query: 398 FPYLDQVIKEAMRIYLVSPLVA--RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPE 455
PYLDQV++E +R L+ P+ RE ++ + G+ PKG V + D +P+
Sbjct: 301 MPYLDQVLQEVLR--LIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPD 358
Query: 456 PDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
P+KF PERF P+ A P A++PFG G R C+G++FA E+KL L + +
Sbjct: 359 PEKFDPERFTPDG-SATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF 412
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 196/485 (40%), Gaps = 53/485 (10%)
Query: 56 PGPPPIPLVGHI-PLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P P++G+I + A+ + + ++ YGP+F ++G +P +++ E +E +
Sbjct: 13 PGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDL 72
Query: 115 FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSIIES 174
++ R PI G+ F+ W MR L + + + IE
Sbjct: 73 GEEFAGRG-SVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMG------KRSIED 125
Query: 175 ATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTA 234
Q VE + +N + T +G A P ++ S+ I N+ D
Sbjct: 126 RIQEEARCLVEELRKTNASPCDPTFILGCA-----------PCNVICSV-IFHNRFD--- 170
Query: 235 VLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDW--KVERTNQ 292
K + P+ Q+ P +D+ + +T
Sbjct: 171 --------------YKDEEFLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLL 216
Query: 293 KLSGRLDEIVFKRMKESKQ-----GSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
K + + + +++KE ++ +D + + ++E E+ FT + + +
Sbjct: 217 KNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLI--KMEQENNLEFTLESLVIAVSDLF 274
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKE 407
AG+ TTS L + L+ HPEV ++ EI+ R P D + + PY D VI E
Sbjct: 275 GAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQD-RSRMPYTDAVIHE 333
Query: 408 AMR-IYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
R I L+ + ++V Y +PKGT + +L V D K FP P F P F
Sbjct: 334 IQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLD 393
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEF 526
E + ++PF G R C+G+ A E+ L L + +N+ + + P +L+
Sbjct: 394 --ESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ---SLVEPKDLDI 448
Query: 527 GIILN 531
++N
Sbjct: 449 TAVVN 453
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 187/458 (40%), Gaps = 35/458 (7%)
Query: 56 PGPPPIPLVGHI-PLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G+I + + + + L+K YGP+F + G + ++++ E+ +E I
Sbjct: 14 PGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDL 73
Query: 115 FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQSIIES 174
++ R P+A G+ F+ +W +R L + + + IE
Sbjct: 74 GEEFSGRG-HFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMG------KRSIED 126
Query: 175 ATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTA 234
Q VE + + + T +G A P ++ SI
Sbjct: 127 RVQEEARCLVEELRKTKASPCDPTFILGCA-----------PCNVICSIIFQKR------ 169
Query: 235 VLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQKL 294
D+ +Q + M+ F I+ PGT + ++
Sbjct: 170 -FDYKDQQFLNL----MEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFME 224
Query: 295 SGRLDEIVFKRMKESKQGSKDLL-SLIVKARELETESKNVFTPDYISAVTYEHLLAGSAT 353
S L+++ + +D + ++K + + ++ FT + + + L AG+ T
Sbjct: 225 SDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTET 284
Query: 354 TSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMR-IY 412
TS L + L+ HPEV K+ EI+ R P D + PY D V+ E R I
Sbjct: 285 TSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQD-RGHMPYTDAVVHEVQRYID 343
Query: 413 LVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAK 472
L+ + +V+ Y +PKGT + +L V D+K FP P+ F P F K
Sbjct: 344 LIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFK 403
Query: 473 QRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++PF G R C+G+ A E+ L L + +N+
Sbjct: 404 KSN--YFMPFSAGKRICVGEGLARMELFLFLTFILQNF 439
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 47/464 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G++ + R G F L ++YG +F ++G +P++++ + RE + +
Sbjct: 13 PGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 115 FKDIPNRSVPSPIAASPLHQK-GLFFTRDGKWSAMRNTILSFYQPTHLA--SLVPTMQSI 171
+ R + P+ Q G+ F +W A+R L+ + + S+ +Q
Sbjct: 73 AEAFSGRGKIA--VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEE 130
Query: 172 IESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRD 231
+ + SK + + L ++ ++ I FG F D + +
Sbjct: 131 ARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-------DYKDPVFLR----- 178
Query: 232 GTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTN 291
+LD Q + E F LK PGT ++ R
Sbjct: 179 ---LLDLFFQSFSLISSFSSQVF---------------ELFSGFLKHFPGT-HRQIYRNL 219
Query: 292 QKLSGRLDEIVFK-RMKESKQGSKDLLSL-IVKARELETESKNVFTPDYISAVTYEHLLA 349
Q+++ + + V K R +D + + +++ + +++ + F + A
Sbjct: 220 QEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFA 279
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEA 408
G+ TTS L L+ +P V ++ EI+ G P ALD + K PY D VI E
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR--PPALDDRAKMPYTDAVIHEI 337
Query: 409 MRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DP 466
R+ + P V K+ + GY +PK T V+ L D + F P+ F P F D
Sbjct: 338 QRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
N + ++PF +G R C+G+ A E+ L + +N+
Sbjct: 398 NGALKRNE---GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 47/464 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G++ + R G F L ++YG +F ++G +P++++ + RE + +
Sbjct: 13 PGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 115 FKDIPNRSVPSPIAASPLHQK-GLFFTRDGKWSAMRNTILSFYQPTHLA--SLVPTMQSI 171
+ R + P+ Q G+ F +W A+R L+ + + S+ +Q
Sbjct: 73 AEAFSGRGKIA--VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEE 130
Query: 172 IESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRD 231
+ + SK + + L ++ ++ I FG F D + +
Sbjct: 131 ARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-------DYKDPVFLR----- 178
Query: 232 GTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTN 291
+LD Q + E F LK PGT ++ R
Sbjct: 179 ---LLDLFFQSFSLISSFSSQVF---------------ELFSGFLKYFPGT-HRQIYRNL 219
Query: 292 QKLSGRLDEIVFK-RMKESKQGSKDLLSL-IVKARELETESKNVFTPDYISAVTYEHLLA 349
Q+++ + + V K R +D + + +++ + +++ + F + A
Sbjct: 220 QEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFA 279
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEA 408
G+ TTS L L+ +P V ++ EI+ G P ALD + K PY D VI E
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR--PPALDDRAKMPYTDAVIHEI 337
Query: 409 MRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DP 466
R+ + P V K+ + GY +PK T V+ L D + F P+ F P F D
Sbjct: 338 QRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
N + ++PF +G R C+G+ A E+ L + +N+
Sbjct: 398 NGALKRNE---GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 189/455 (41%), Gaps = 60/455 (13%)
Query: 75 PEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKKFKDIPNRSVPSPIAA----S 130
P F L +R+G +F + P++++ RE + +D +R P PI
Sbjct: 33 PYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFG 91
Query: 131 PLHQKGLFFTRDG-KWSAMRNTILSFYQPTHLASLVPTMQSIIESATQNIESSKVENITF 189
P Q G+F R G W R + + L +L +S+ + T+
Sbjct: 92 PRSQ-GVFLARYGPAWREQRR-----FSVSTLRNLGLGKKSLEQWVTEE----------- 134
Query: 190 SNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTAVLDFINQHIYSTTQL 249
A L AAF + G +P + D AV + I + +
Sbjct: 135 ---AACLC------AAFANHSGRPFRPNGLLDK-----------AVSNVIAS-LTCGRRF 173
Query: 250 KMDXXXXXXXXXXXXXXXXQEP--FRQILKRIP-----GTMDWKVERTNQKLSGRLDEIV 302
+ D +E R++L +P + KV R + +LDE++
Sbjct: 174 EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELL 233
Query: 303 FK-RMK-ESKQGSKDLL-SLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
+ RM + Q +DL + + + + + ++ F + + V + AG TTS L+
Sbjct: 234 TEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLA 293
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL-V 418
+ L+ HP+V+ ++ EID + P D Q PY VI E R + PL V
Sbjct: 294 WGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGD-QAHMPYTTAVIHEVQRFGDIVPLGV 352
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCEEAKQRHPC 477
T++++E+ G+R+PKGT + L V KD + +P +F PE F D K P
Sbjct: 353 THMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVK---PE 409
Query: 478 AYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 512
A+LPF G RAC+G+ A E+ L L +++ F
Sbjct: 410 AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF 444
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 47/464 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G++ + R G F L ++YG +F ++G +P++++ + RE + +
Sbjct: 13 PGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 115 FKDIPNRSVPSPIAASPLHQK-GLFFTRDGKWSAMRNTILSFYQPTHLA--SLVPTMQSI 171
+ R + P+ Q G+ F +W A+R L+ + + S+ +Q
Sbjct: 73 AEAFSGRGKIA--VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEE 130
Query: 172 IESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRD 231
+ + SK + + L ++ ++ I FG F D + +
Sbjct: 131 ARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-------DYKDPVFLR----- 178
Query: 232 GTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTN 291
+LD Q + E F LK PGT ++ R
Sbjct: 179 ---LLDLFFQSFSLISSFSSQVF---------------ELFSGFLKYFPGT-HRQIYRNL 219
Query: 292 QKLSGRLDEIVFK-RMKESKQGSKDLLSL-IVKARELETESKNVFTPDYISAVTYEHLLA 349
Q+++ + + V K R +D + + +++ + +++ + F + A
Sbjct: 220 QEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFA 279
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEA 408
G+ TTS L L+ +P V ++ EI+ G P ALD + K PY D VI E
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR--PPALDDRAKMPYTDAVIHEI 337
Query: 409 MRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DP 466
R+ + P V K+ + GY +PK T V+ L D + F P+ F P F D
Sbjct: 338 QRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
N + ++PF +G R C+G+ A E+ L + +N+
Sbjct: 398 NGALKRNE---GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 190/466 (40%), Gaps = 51/466 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G++ + R G F L ++YG +F ++G +P++++ + RE + +
Sbjct: 13 PGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 115 FKDIPNR---SVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLA--SLVPTMQ 169
+ R +V PI G+ F +W A+R L+ + + S+ +Q
Sbjct: 73 AEAFSGRGKIAVVDPI----FQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQ 128
Query: 170 SIIESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQ 229
+ + SK + + L ++ ++ I FG F D + +
Sbjct: 129 EEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-------DYKDPVFLR--- 178
Query: 230 RDGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVER 289
+LD Q + E F LK PGT ++ R
Sbjct: 179 -----LLDLFFQSFSLISSFSSQVF---------------ELFSGFLKYFPGT-HRQIYR 217
Query: 290 TNQKLSGRLDEIVFK-RMKESKQGSKDLLSL-IVKARELETESKNVFTPDYISAVTYEHL 347
Q+++ + + V K R +D + + +++ + +++ + F +
Sbjct: 218 NLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLF 277
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIK 406
AG+ TTS L L+ +P V ++ EI+ G P ALD + K PY D VI
Sbjct: 278 FAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR--PPALDDRAKMPYTDAVIH 335
Query: 407 EAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF- 464
E R+ + P V K+ + GY +PK T V+ L D + F P+ F P F
Sbjct: 336 EIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
Query: 465 DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
D N + ++PF +G R C G+ A E+ L + +N+
Sbjct: 396 DANGALKRNE---GFMPFSLGKRICAGEGIARTELFLFFTTILQNF 438
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 191/464 (41%), Gaps = 47/464 (10%)
Query: 56 PGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G++ + R G F L ++YG +F ++G +P++++ + RE + +
Sbjct: 13 PGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ 72
Query: 115 FKDIPNRSVPSPIAASPLHQK-GLFFTRDGKWSAMRNTILSFYQPTHLA--SLVPTMQSI 171
+ R + P+ Q G+ F +W A+R L+ + + S+ +Q
Sbjct: 73 AEAFSGRGKIA--VVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEE 130
Query: 172 IESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRD 231
+ + SK + + L ++ ++ I FG F D + +
Sbjct: 131 ARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRF-------DYKDPVFLR----- 178
Query: 232 GTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTN 291
+LD Q + E F LK PGT ++ R
Sbjct: 179 ---LLDLFFQSFSLISSFSSQVF---------------ELFSGFLKYFPGT-HRQIYRNL 219
Query: 292 QKLSGRLDEIVFK-RMKESKQGSKDLLSL-IVKARELETESKNVFTPDYISAVTYEHLLA 349
Q+++ + + V K R +D + + +++ + +++ + F + A
Sbjct: 220 QEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAA 279
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEA 408
G+ TTS L L+ +P V ++ EI+ G P ALD + K PY D VI E
Sbjct: 280 GTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR--PPALDDRAKMPYTDAVIHEI 337
Query: 409 MRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DP 466
R+ + P V K+ + GY +PK T V+ L D + F P+ F P F D
Sbjct: 338 QRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDA 397
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
N + ++PF +G R C+G+ A E+ L + +N+
Sbjct: 398 NGALKRNE---GFMPFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 189/455 (41%), Gaps = 60/455 (13%)
Query: 75 PEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKKFKDIPNRSVPSPIAA----S 130
P F L +R+G +F + P++++ RE + +D +R P PI
Sbjct: 33 PYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFG 91
Query: 131 PLHQKGLFFTRDG-KWSAMRNTILSFYQPTHLASLVPTMQSIIESATQNIESSKVENITF 189
P Q G+F R G W R + + L +L +S+ + T+
Sbjct: 92 PRSQ-GVFLARYGPAWREQRR-----FSVSTLRNLGLGKKSLEQWVTEE----------- 134
Query: 190 SNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTAVLDFINQHIYSTTQL 249
A L AAF + G +P + D AV + I + +
Sbjct: 135 ---AACLC------AAFANHSGRPFRPNGLLDK-----------AVSNVIAS-LTCGRRF 173
Query: 250 KMDXXXXXXXXXXXXXXXXQEP--FRQILKRIP-----GTMDWKVERTNQKLSGRLDEIV 302
+ D +E R++L +P + KV R + +LDE++
Sbjct: 174 EYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIPALAGKVLRFQKAFLTQLDELL 233
Query: 303 FK-RMK-ESKQGSKDLL-SLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
+ RM + Q +DL + + + + + ++ F + + V + AG TTS L+
Sbjct: 234 TEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLA 293
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL-V 418
+ L+ HP+V+ ++ EID + P D Q PY VI E R + PL +
Sbjct: 294 WGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGD-QAHMPYTTAVIHEVQRFGDIVPLGM 352
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCEEAKQRHPC 477
T++++E+ G+R+PKGT + L V KD + +P +F PE F D K P
Sbjct: 353 THMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVK---PE 409
Query: 478 AYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 512
A+LPF G RAC+G+ A E+ L L +++ F
Sbjct: 410 AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF 444
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 215/510 (42%), Gaps = 64/510 (12%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKKF 115
P P PL+GH+ L + S +++RYG + + +G P+++++ + R+ +++
Sbjct: 19 PEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQG 78
Query: 116 KDIPNRSVPSPIAASPLHQKG--LFFTRDGK--WSAMR----NTILSFY--------QPT 159
D R + S L G L F+ D W+A R N + +F
Sbjct: 79 DDFKGRP---DLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSC 135
Query: 160 HLASLVPTMQSIIESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+L V + S Q + + ++ + +++A + IG FG +F PES
Sbjct: 136 YLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVA-NVIGAMCFGQHF-----PESS 189
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRI 279
+ + + N + F+ +++ +D F IL+ +
Sbjct: 190 DEMLSLVKNTHE------FVET---ASSGNPLD-------------------FFPILRYL 221
Query: 280 PGTMDWKVERTNQKLSGRLDEIVFKRMKE-SKQGSKDLLSLIVK-ARELETESKNVFTPD 337
P + + NQ+ L + V + ++ K +D+ + K +++ S N+ +
Sbjct: 222 PNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQE 281
Query: 338 YISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ 396
I + + AG T + A+S S++YLV PE++ K+ E+D RE P D Q
Sbjct: 282 KIVNLVNDIFGAGFDTVTTAISWSLMYLVTK-PEIQRKIQKELDTVIGRERRPRLSDRPQ 340
Query: 397 KFPYLDQVIKEAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPE 455
PYL+ I E R P + T ++ + G+ +PK V++ V D + + +
Sbjct: 341 -LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWED 399
Query: 456 PDKFKPERFDPNCEEAKQRHPCA--YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
P +F+PERF + P + + FG+G R CIG+ A EI L L L + F
Sbjct: 400 PSEFRPERF-LTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFS 458
Query: 514 HSPDMENPLELEFGIILNFKHGVKLRVLSR 543
P ++ L +G L KH V +R
Sbjct: 459 VPPGVKVDLTPIYG--LTMKHARCEHVQAR 486
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 32/230 (13%)
Query: 302 VFKRMKESKQGSKDLLSLIV--KARELETESK-----------------NVFTPDYISAV 342
++K+ ++S + KD + +++ K R + TE K T + ++
Sbjct: 240 LYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVNQC 299
Query: 343 TYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYL 401
E L+A T S +L +++L+A HP VE ++ EI G R++ +D QK +
Sbjct: 300 ILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDI---KIDDIQKLKVM 356
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
+ I E+MR V LV R+ ++ I GY + KGT + L +G + + + FP+P++F
Sbjct: 357 ENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTL 415
Query: 462 ERFDPNCEEAKQRHPCAYL-PFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
E F N P Y PFG GPR C G+ AM +K L+ L R +
Sbjct: 416 ENFAKNV-------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 173/441 (39%), Gaps = 46/441 (10%)
Query: 78 FSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKKFKDIPNRSVPSPIAASPLHQK-G 136
F ++YG +F H+G +P++++ E RE + K + R + + P + G
Sbjct: 36 FLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMV--DPFFRGYG 93
Query: 137 LFFTRDGKWSAMRNTILSFYQPTHLA--SLVPTMQSIIESATQNIESSKVENITFSNLAL 194
+ F +W +R ++ + + S+ +Q + + + SK + + L
Sbjct: 94 VIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQ 153
Query: 195 TLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTAVLDFINQHIYSTTQLKMDXX 254
++ + I FG F + L +N Y T L
Sbjct: 154 SITANIICSIVFGKRFHYQDQ------------------EFLKMLNL-FYQTFSL----- 189
Query: 255 XXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQKLSGRLDEIVFK-RMKESKQGS 313
E F LK PG +V + Q+++ + V K R
Sbjct: 190 ------ISSVFGQLFELFSGFLKHFPGA-HRQVYKNLQEINAYIGHSVEKHRETLDPSAP 242
Query: 314 KDLLSLIVKARELE-TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVE 372
+DL+ + E E + + + F+ ++ T AG+ TTS L L+ +P V
Sbjct: 243 RDLIDTYLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVA 302
Query: 373 NKLLAEIDG-FGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL-VARETAKEVEIGG 430
++ EI+ GP P L + K PY + VI E R + P+ V + G
Sbjct: 303 ERVYREIEQVIGPHR--PPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRG 360
Query: 431 YRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCEEAKQRHPCAYLPFGIGPRAC 489
Y +PK T V+L L D F +PD F P+ F D N K A++PF +G R C
Sbjct: 361 YIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE---AFIPFSLGKRIC 417
Query: 490 IGQKFAMQEIKLSLIHLYRNY 510
+G+ A E+ L + +N+
Sbjct: 418 LGEGIARAELFLFFTTILQNF 438
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 6/205 (2%)
Query: 318 SLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLA 377
++K + + K+ F + + + +AG+ TTS L + L+ HPEV K+
Sbjct: 248 CFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQE 307
Query: 378 EIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY-LVSPLVARETAKEVEIGGYRLPKG 436
EID R P D + PY D V+ E R LV V + + Y +PKG
Sbjct: 308 EIDHVIGRHRSPCMQD-RSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKG 366
Query: 437 TWVWLALGVVAKDSKNFPEPDKFKPERF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFA 495
T + L V D K FP P+ F P F D N K + ++PF G R C G+ A
Sbjct: 367 TTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY---FMPFSAGKRICAGEGLA 423
Query: 496 MQEIKLSLIHLYRNYVFRHSPDMEN 520
E+ L L + +N+ + D++N
Sbjct: 424 RMELFLFLTTILQNFNLKSVDDLKN 448
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 56 PGPPPIPLVGH-IPLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK 114
PGP P+P++G+ + + + + F+ +K YGP+F + G P+++ E +E I
Sbjct: 13 PGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDN 72
Query: 115 FKDIPNRSVPSPIAASPLHQKGLFFTRDGKWSAMR 149
++ R SPI+ G+ + +W +R
Sbjct: 73 GEEFSGRG-NSPISQRITKGLGIISSNGKRWKEIR 106
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 185/478 (38%), Gaps = 67/478 (14%)
Query: 51 KVRRVPGPPPIPLVGHIPLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREV 110
K+R + PP +P G + LL P L ++ GP++R +G Q ++++ E
Sbjct: 24 KLRNLHLPPLVP--GFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEA 81
Query: 111 GIKKFKDIPNR-SVPSPIAASPLHQKGLFFTRDGKWSAMRNTILSFYQPTHLASLVPTMQ 169
I+K+ D R +PS S Q W A + S +S+ P +
Sbjct: 82 MIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVD 141
Query: 170 SIIESATQNIESSKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIADNQ 229
+ + + + +T L I FG +K +++ + D
Sbjct: 142 QLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFG------NKEDTLVHAF--HDCV 193
Query: 230 RDGTAVLDFINQHIYSTTQLKMDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVER 289
+D D + I PF L+ P W R
Sbjct: 194 QDLMKTWDHWSIQILDMV-----------------------PF---LRFFPNPGLW---R 224
Query: 290 TNQKLSGRLDEIVFKRMKESKQGS-----KDLLSLIVKA--RELETESKNVFTPDYISAV 342
Q + R D +V K+++ K+ +D+ +++ R+ E ++
Sbjct: 225 LKQAIENR-DHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMS 283
Query: 343 TYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTA------LDLQQ 396
+ + G+ TT+ LS V + HPE++ +L E+D REL P A +
Sbjct: 284 VVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELD----RELGPGASCSRVTYKDRA 339
Query: 397 KFPYLDQVIKEAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPE 455
+ P L+ I E +R+ V PL + T + I GY +P+G V L D + +
Sbjct: 340 RLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQ 399
Query: 456 PDKFKPERF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 512
P +F+P+RF +P +P A L FG G R C+G+ A E+ + L L + +
Sbjct: 400 PHEFRPDRFLEPGA------NPSA-LAFGCGARVCLGESLARLELFVVLARLLQAFTL 450
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 15/230 (6%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSAT 353
++ +D+I+ R K S + S DLL+ ++ ++ ET IS L+AG T
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTQMLNGKDPETGEP--LDDGNISYQIITFLIAGHET 268
Query: 354 TSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKEAMRI 411
TS LS +Y + +P V K+ E R LV +Q + Y+ V+ EA+R+
Sbjct: 269 TSGLLSFALYFLVKNPHVLQKVAEE----ATRVLVDPVPSYKQVKQLKYVGMVLNEALRL 324
Query: 412 YLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFDPNCE 469
+ +P + ++ +GG Y L KG V + + + +D + + ++F+PERF+
Sbjct: 325 WPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFE--NP 382
Query: 470 EAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
A +H A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 383 SAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 345 EHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQ 403
E ++AG+ TT+ L + +A +P ++ ++ EID GP + D + K PY +
Sbjct: 280 ELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG--KPSWDDKCKMPYTEA 337
Query: 404 VIKEAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPE 462
V+ E +R + PL + T+++ + GY +PKGT V L V D K + +P+ F PE
Sbjct: 338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE 397
Query: 463 RF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENP 521
RF D + AK+ A +PF +G R C+G+ A E+ L L + + ++
Sbjct: 398 RFLDSSGYFAKKE---ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPD 454
Query: 522 LELEFGIIL 530
L+ G+ L
Sbjct: 455 LKPRLGMTL 463
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 345 EHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDG-FGPRELVPTALDLQQKFPYLDQ 403
E ++AG+ TT+ L + +A +P ++ ++ EID GP + D + K PY +
Sbjct: 280 ELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNG--KPSWDDKCKMPYTEA 337
Query: 404 VIKEAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPE 462
V+ E +R + PL + T+++ + GY +PKGT V L V D K + +P+ F PE
Sbjct: 338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE 397
Query: 463 RF-DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
RF D + AK+ A +PF +G R C+G+ A E+ L L + +
Sbjct: 398 RFLDSSGYFAKKE---ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 10/216 (4%)
Query: 298 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFA 357
+DEI+ +R + S Q DLL+ +++A++ ++ + I L GS T +
Sbjct: 227 VDEIIAER-RASGQKPDDLLTALLEAKD---DNGDPIGEQEIHDQVVAILTPGSETIAST 282
Query: 358 LSSIVYLVAAHPEVENKLLAEIDGF-GPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSP 416
+ ++ +A HPE +++ E++ G R P A + +K + VI EAMR+
Sbjct: 283 IMWLLQALADHPEHADRIRDEVEAVTGGR---PVAFEDVRKLRHTGNVIVEAMRLRPAVW 339
Query: 417 LVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHP 476
++ R E E+GGYR+P G + + + +D K++ + +F P+R+ P E A
Sbjct: 340 VLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP--ERAANVPK 397
Query: 477 CAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 512
A PF G R C F+M ++ L L Y F
Sbjct: 398 YAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ VT+ L+A
Sbjct: 218 MNDLVDKIIADR-KASGEQSDDLLTHMLHGKDPETGEPLDDENI----RYQIVTF--LIA 270
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 271 GHETTSGLLSFTLYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 326
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 327 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFE 386
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 387 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 436
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 215 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 267
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 268 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 323
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ SP + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 324 ALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 383
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 384 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 433
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FFGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 195/482 (40%), Gaps = 67/482 (13%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREV 110
++ +P P + ++PLL P + +A G IF+F + ++ L +E
Sbjct: 3 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEA 62
Query: 111 GIKKFKDIPNRSVPSPIA-ASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTHLASLVPT 167
+ D +++ + GLF +T + W N +L + +
Sbjct: 63 ADESRFD---KNLSQALKFVRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAM 119
Query: 168 MQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIA 226
M I Q E + E+I L DTIG + F F + +
Sbjct: 120 MVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQP-------- 171
Query: 227 DNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKRIPGTMDW 285
H + T+ ++ +D E RQ + I
Sbjct: 172 ---------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDI------ 210
Query: 286 KVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISA 341
+ ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 211 ------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQI 259
Query: 342 VTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFP 399
+T+ L+AG TTS LS +Y + +P V K E R LV +Q +
Sbjct: 260 ITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLK 313
Query: 400 YLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-D 457
Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D + + +
Sbjct: 314 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 458 KFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPD 517
+F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++ F +
Sbjct: 374 EFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTN 429
Query: 518 ME 519
E
Sbjct: 430 YE 431
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 213 MNDLVDKIIADR-KASGEQSDDLLTHMLHGKDPETGEPLDDENI----RYQIITF--LIA 265
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS L+ +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 266 GHETTSGLLTFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 321
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+RI+ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 322 ALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFE 381
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLE 523
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E +E
Sbjct: 382 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIE 435
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 272 FRQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKES---KQGSKDLLSLIVKARELET 328
F L R+P + +L L EI+ R KE + DLL ++KA +
Sbjct: 200 FMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 259
Query: 329 ESKNVFTPDYISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVE---NKLLAEIDGFGP 384
++ + + + AG T++ S S+++L+ HP+ + +KL EID F P
Sbjct: 260 TRMSLHE---VCGMIVAAMFAGQHTSTITTSWSMLHLM--HPKNKKWLDKLHKEIDEF-P 313
Query: 385 RELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALG 444
+L ++ + P+ ++ ++E++R +V R EV++G Y +PKG + +
Sbjct: 314 AQL--NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPL 371
Query: 445 VVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLI 504
+ D + FP P + PER ++ A++ FG G CIGQKFA+ ++K L
Sbjct: 372 LSHHDEEAFPNPRLWDPER--------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILA 423
Query: 505 HLYRNYVFR 513
+R Y F+
Sbjct: 424 TAFREYDFQ 432
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 189/485 (38%), Gaps = 73/485 (15%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDY 338
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET +
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEP--LDDEN 253
Query: 339 ISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ-- 396
I L+AG TTS LS +Y + +P V K E R LV +Q
Sbjct: 254 IRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVK 309
Query: 397 KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPE 455
+ Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D + +
Sbjct: 310 QLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGD 369
Query: 456 P-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRH 514
++F+PERF+ A +H A+ PFG G RACIGQ+FA+ E L L + +++ F
Sbjct: 370 DVEEFRPERFE--NPSAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFED 425
Query: 515 SPDME 519
+ E
Sbjct: 426 HTNYE 430
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 272 FRQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKES---KQGSKDLLSLIVKARELET 328
F L R+P + +L L EI+ R KE + DLL ++KA +
Sbjct: 191 FMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 250
Query: 329 ESKNVFTPDYISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVE---NKLLAEIDGFGP 384
++ + + + AG T++ S S+++L+ HP+ + +KL EID F P
Sbjct: 251 TRMSLHE---VCGMIVAAMFAGQHTSTITTSWSMLHLM--HPKNKKWLDKLHKEIDEF-P 304
Query: 385 RELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALG 444
+L ++ + P+ ++ ++E++R +V R EV++G Y +PKG + +
Sbjct: 305 AQL--NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPL 362
Query: 445 VVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLI 504
+ D + FP P + PER ++ A++ FG G CIGQKFA+ ++K L
Sbjct: 363 LSHHDEEAFPNPRLWDPER--------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILA 414
Query: 505 HLYRNYVFR 513
+R Y F+
Sbjct: 415 TAFREYDFQ 423
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 272 FRQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKES---KQGSKDLLSLIVKARELET 328
F L R+P + +L L EI+ R KE + DLL ++KA +
Sbjct: 185 FMPWLLRLPLPQSARCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 244
Query: 329 ESKNVFTPDYISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVE---NKLLAEIDGFGP 384
++ + + + AG T++ S S+++L+ HP+ + +KL EID F P
Sbjct: 245 TRMSLHE---VCGMIVAAMFAGQHTSTITTSWSMLHLM--HPKNKKWLDKLHKEIDEF-P 298
Query: 385 RELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALG 444
+L ++ + P+ ++ ++E++R +V R EV++G Y +PKG + +
Sbjct: 299 AQL--NYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPL 356
Query: 445 VVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLI 504
+ D + FP P + PER ++ A++ FG G CIGQKFA+ ++K L
Sbjct: 357 LSHHDEEAFPNPRLWDPER--------DEKVDGAFIGFGAGVHKCIGQKFALLQVKTILA 408
Query: 505 HLYRNYVFR 513
+R Y F+
Sbjct: 409 TAFREYDFQ 417
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
A +H A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 --NPSAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 215 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 267
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 268 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 323
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 324 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 383
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 384 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 433
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 213 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 265
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 321
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 322 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 381
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 382 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 431
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 349 AGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEA 408
A T S AL ++ L +P+V+ ++ AE+D R+ +P D Q PY+ + EA
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGD-QPNLPYVLAFLYEA 348
Query: 409 MRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPN 467
MR P+ + T + GY +PK T V++ V D +P P+ F P RF
Sbjct: 349 MRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDK 408
Query: 468 CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDMENPLELEFG 527
+ + F +G R CIG++ + ++ L + L FR +P+ + +G
Sbjct: 409 DGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYG 468
Query: 528 IIL---NFKHGVKLR 539
+ + +FK V LR
Sbjct: 469 LTIKPKSFKVNVTLR 483
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKK- 114
PGP PL+G+ + + F+ LA+RYG +F+ +G P++++ + +++
Sbjct: 12 PGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQG 71
Query: 115 --FKDIPN 120
F D P+
Sbjct: 72 SAFADRPS 79
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 213 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 265
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 321
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 322 ALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 381
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 382 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 431
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ P+G G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPYGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 5 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 61
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 62 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 114
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 115 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 173
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 174 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 211
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 212 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 257
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 258 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 308
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ P + ++ +GG Y L KG + + + + +D
Sbjct: 309 KQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 368
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 369 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 424
Query: 511 VFRHSPDME 519
F + E
Sbjct: 425 DFEDHTNYE 433
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 213 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 265
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G +TS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 266 GHESTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 321
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 322 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 381
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 382 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 431
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G +TS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHESTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 195/490 (39%), Gaps = 83/490 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 3 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 59
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S +P L GLF +T + W N +L +
Sbjct: 60 -KEACDESRFDK-----NLS-QAPKFVRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 112
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 113 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 171
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 172 ----------------------HPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQED 209
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 210 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 255
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELV---PTA 391
+T+ L AG TS LS +Y + +P K E R LV P+
Sbjct: 256 ---RYQIITF--LAAGHEATSGLLSFALYFLVKNPHELQKAAEE----AARVLVDPVPSH 306
Query: 392 LDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDS 450
++Q Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 307 KQVKQ-LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 365
Query: 451 KNFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + ++
Sbjct: 366 TVWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKH 421
Query: 510 YVFRHSPDME 519
+ F + E
Sbjct: 422 FDFEDHTNYE 431
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G +TS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHESTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHENTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ A +H A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE--NPSAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ P+G G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPWGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+ G TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LICGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIG++FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGKQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+ G TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIEGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ A +H A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE--NPSAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+ G TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIQGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIM 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ A +H A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE--NPSAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIK 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
A +H A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 --NPSAIPQH--AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+
Sbjct: 212 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIH 264
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 265 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 320
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 321 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 380
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RACIGQ+FA+ E L L + +++ F + E
Sbjct: 381 -NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYE 430
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 309 SKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAH 368
+ + +D+L +++ A + ET + F+ D I+ + + AG T+S S + + H
Sbjct: 218 TDKSDRDMLDVLI-AVKAETGTPR-FSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 369 PEVENKLLAEID---GFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKE 425
+ ++ E+D G G R + AL ++ P L+ V+KE +R++ ++ R E
Sbjct: 276 RDAYAAVIDELDELYGDG-RSVSFHAL---RQIPQLENVLKETLRLHPPLIILMRVAKGE 331
Query: 426 VEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD-PNCEEAKQRHPCAYLPFGI 484
E+ G+R+ +G V + + + ++FP+P F P R++ P E+ R ++PFG
Sbjct: 332 FEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGA 389
Query: 485 GPRACIGQKFAMQEIKLSLIHLYRNYVF 512
G C+G FA+ +IK L R Y F
Sbjct: 390 GRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ P G G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPHGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 309 SKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAH 368
+ + +D+L +++ A + ET + F+ D I+ + + AG T+S S + + H
Sbjct: 218 TDKSDRDMLDVLI-AVKAETGTPR-FSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 369 PEVENKLLAEID---GFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKE 425
+ ++ E+D G G R + AL ++ P L+ V+KE +R++ ++ R E
Sbjct: 276 RDAYAAVIDELDELYGDG-RSVSFHAL---RQIPQLENVLKETLRLHPPLIILMRVAKGE 331
Query: 426 VEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD-PNCEEAKQRHPCAYLPFGI 484
E+ G+R+ +G V + + + ++FP+P F P R++ P E+ R ++PFG
Sbjct: 332 FEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGA 389
Query: 485 GPRACIGQKFAMQEIKLSLIHLYRNYVF 512
G C+G FA+ +IK L R Y F
Sbjct: 390 GRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 309 SKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAH 368
+ + +D+L +++ A + ET + F+ D I+ + + AG T+S S + + H
Sbjct: 218 TDKSDRDMLDVLI-AVKAETGTPR-FSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 369 PEVENKLLAEID---GFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKE 425
+ ++ E+D G G R + AL ++ P L+ V+KE +R++ ++ R E
Sbjct: 276 RDAYAAVIDELDELYGDG-RSVSFHAL---RQIPQLENVLKETLRLHPPLIILMRVAKGE 331
Query: 426 VEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD-PNCEEAKQRHPCAYLPFGI 484
E+ G+R+ +G V + + + ++FP+P F P R++ P E+ R ++PFG
Sbjct: 332 FEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGA 389
Query: 485 GPRACIGQKFAMQEIKLSLIHLYRNYVF 512
G C+G FA+ +IK L R Y F
Sbjct: 390 GRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 309 SKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAH 368
+ + +D+L +++ A + ET + F+ D I+ + + AG T+S S + + H
Sbjct: 218 TDKSDRDMLDVLI-AVKAETGTPR-FSADEITGMFISMMFAGHHTSSGTASWTLIELMRH 275
Query: 369 PEVENKLLAEID---GFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKE 425
+ ++ E+D G G R + AL ++ P L+ V+KE +R++ ++ R E
Sbjct: 276 RDAYAAVIDELDELYGDG-RSVSFHAL---RQIPQLENVLKETLRLHPPLIILMRVAKGE 331
Query: 426 VEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD-PNCEEAKQRHPCAYLPFGI 484
E+ G+R+ +G V + + + ++FP+P F P R++ P E+ R ++PFG
Sbjct: 332 FEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNR--WTWIPFGA 389
Query: 485 GPRACIGQKFAMQEIKLSLIHLYRNYVF 512
G C+G FA+ +IK L R Y F
Sbjct: 390 GRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S +P GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLS-QAPKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L AG TS LS +Y + +P K E R LV
Sbjct: 255 ---RYQIITF--LAAGHEATSGLLSFALYFLVKNPHELQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 193/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ A +H A+ PFG G RAC GQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE--NPSAIPQH--AFKPFGNGQRACEGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 23/234 (9%)
Query: 294 LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVFTPDYISAVTYEHLLA 349
++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+ +T+ L+A
Sbjct: 213 MNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI----RYQIITF--LIA 265
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQ--KFPYLDQVIKE 407
G TTS LS +Y + +P V K E R LV +Q + Y+ V+ E
Sbjct: 266 GHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSYKQVKQLKYVGMVLNE 321
Query: 408 AMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSKNFPEP-DKFKPERFD 465
A+R++ +P + ++ +GG Y L KG + + + + +D + + ++F+PERF+
Sbjct: 322 ALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFE 381
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME 519
N Q A+ PFG G RAC GQ+FA+ E L L + +++ F + E
Sbjct: 382 -NPSAIPQH---AFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYE 431
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 192/489 (39%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L+AG TTS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LIAGHETTSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ +P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ P G G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPAGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 190/489 (38%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 58
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 59 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 111
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 112 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 170
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 171 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 208
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 209 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 254
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L AG TS LS +Y + +P V K E R LV
Sbjct: 255 ---RYQIITF--LAAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 305
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ P + ++ +GG Y L KG + + + + +D
Sbjct: 306 KQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 365
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 366 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 421
Query: 511 VFRHSPDME 519
F + E
Sbjct: 422 DFEDHTNYE 430
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 190/489 (38%), Gaps = 81/489 (16%)
Query: 52 VRRVPGPPPIPLVGHIPLLARYGP-EVFSVLAKRYGPIFRF--------HMGRQPLIIVA 102
++ +P P + ++PLL P + +A G IF+F ++ Q LI
Sbjct: 3 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLI--- 59
Query: 103 DPELCREVGIKKFKDIPNRSVPSPIAASPLHQKGLF--FTRDGKWSAMRNTILSFYQPTH 160
E C E K N S GLF +T + W N +L +
Sbjct: 60 -KEACDESRFDK-----NLSQALKFVRD-FAGDGLFTSWTHEKNWKKAHNILLPSFSQQA 112
Query: 161 LASLVPTMQSIIESATQNIES-SKVENITFSNLALTLATDTIGQAAFGVNFGLSSKPESI 219
+ M I Q E + E+I L DTIG F F + +
Sbjct: 113 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQP- 171
Query: 220 TDSIGIADNQRDGTAVLDFINQHIYSTTQLK-MDXXXXXXXXXXXXXXXXQEPFRQILKR 278
H + T+ ++ +D E RQ +
Sbjct: 172 ----------------------HPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 209
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELET----ESKNVF 334
I + ++ +D+I+ R K S + S DLL+ ++ ++ ET + +N+
Sbjct: 210 I------------KVMNDLVDKIIADR-KASGEQSDDLLTHMLNGKDPETGEPLDDENI- 255
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
+T+ L AG TS LS +Y + +P V K E R LV
Sbjct: 256 ---RYQIITF--LAAGHEATSGLLSFALYFLVKNPHVLQKAAEE----AARVLVDPVPSY 306
Query: 395 QQ--KFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGG-YRLPKGTWVWLALGVVAKDSK 451
+Q + Y+ V+ EA+R++ P + ++ +GG Y L KG + + + + +D
Sbjct: 307 KQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKT 366
Query: 452 NFPEP-DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+ + ++F+PERF+ N Q A+ PFG G RACIGQ+FA+ E L L + +++
Sbjct: 367 IWGDDVEEFRPERFE-NPSAIPQH---AFKPFGNGQRACIGQQFALHEATLVLGMMLKHF 422
Query: 511 VFRHSPDME 519
F + E
Sbjct: 423 DFEDHTNYE 431
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISA-------------------VTYE 345
R E++ + +LS I+ AR+ E +K+ T D +S +
Sbjct: 214 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 346 HLLAGSATTSFALS-SIVYLVAAHPEVENKLLA---EIDGFGPRELVPTALDLQQKFPYL 401
+ AG T+S + S+++L+ HP L A EI+ F P +L ++ + P+
Sbjct: 274 AMFAGQHTSSITTTWSMLHLM--HPANVKHLEALRKEIEEF-PAQL--NYNNVMDEMPFA 328
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
++ +E++R ++ R+ +V++G Y +PKG + + + D + FPEP ++ P
Sbjct: 329 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 388
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
ER ++ A++ FG G CIGQKF + ++K L +R+Y F+
Sbjct: 389 ER--------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 432
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISA-------------------VTYE 345
R E++ + +LS I+ AR+ E +K+ T D +S +
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 346 HLLAGSATTSFALS-SIVYLVAAHPEVENKLLA---EIDGFGPRELVPTALDLQQKFPYL 401
+ AG T+S + S+++L+ HP L A EI+ F P +L ++ + P+
Sbjct: 261 AMFAGQHTSSITTTWSMLHLM--HPANVKHLEALRKEIEEF-PAQL--NYNNVMDEMPFA 315
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
++ +E++R ++ R+ +V++G Y +PKG + + + D + FPEP ++ P
Sbjct: 316 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 375
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
ER ++ A++ FG G CIGQKF + ++K L +R+Y F+
Sbjct: 376 ER--------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 419
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISA-------------------VTYE 345
R E++ + +LS I+ AR+ E +K+ T D +S +
Sbjct: 202 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 261
Query: 346 HLLAGSATTSFALS-SIVYLVAAHPEVENKLLA---EIDGFGPRELVPTALDLQQKFPYL 401
+ AG T+S + S+++L+ HP L A EI+ F P +L ++ + P+
Sbjct: 262 AMFAGQHTSSITTTWSMLHLM--HPANVKHLEALRKEIEEF-PAQL--NYNNVMDEMPFA 316
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
++ +E++R ++ R+ +V++G Y +PKG + + + D + FPEP ++ P
Sbjct: 317 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 376
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
ER ++ A++ FG G CIGQKF + ++K L +R+Y F+
Sbjct: 377 ER--------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISA-------------------VTYE 345
R E++ + +LS I+ AR+ E +K+ T D +S +
Sbjct: 200 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 259
Query: 346 HLLAGSATTSFALS-SIVYLVAAHPEVENKLLA---EIDGFGPRELVPTALDLQQKFPYL 401
+ AG T+S + S+++L+ HP L A EI+ F P +L ++ + P+
Sbjct: 260 AMFAGQHTSSITTTWSMLHLM--HPANVKHLEALRKEIEEF-PAQL--NYNNVMDEMPFA 314
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
++ +E++R ++ R+ +V++G Y +PKG + + + D + FPEP ++ P
Sbjct: 315 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 374
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
ER ++ A++ FG G CIGQKF + ++K L +R+Y F+
Sbjct: 375 ER--------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 418
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISA-------------------VTYE 345
R E++ + +LS I+ AR+ E +K+ T D +S +
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 346 HLLAGSATTSFALS-SIVYLVAAHPEVENKLLA---EIDGFGPRELVPTALDLQQKFPYL 401
+ AG T+S + S+++L+ HP L A EI+ F P +L ++ + P+
Sbjct: 261 AMFAGQHTSSITTTWSMLHLM--HPANVKHLEALRKEIEEF-PAQL--NYNNVMDEMPFA 315
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
++ +E++R ++ R+ +V++G Y +PKG + + + D + FPEP ++ P
Sbjct: 316 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 375
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
ER ++ A++ FG G CIGQKF + ++K L +R+Y F+
Sbjct: 376 ER--------DEKVEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 419
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 31/229 (13%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAV----------TYEH-------- 346
R ++++ +D+LS I+ ARE E K+ T D ++ + +H
Sbjct: 200 RCRDARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVA 259
Query: 347 -LLAGSATTSFALS-SIVYLVAAHPEVE-NKLLAEIDGFGPRELVPTALDLQQKFPYLDQ 403
+ AG T++ + S+++L+ + KL EID F P +L ++ ++ P+ +Q
Sbjct: 260 AMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEF-PAQL--NYDNVMEEMPFAEQ 316
Query: 404 VIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPER 463
+E++R ++ R+ K V++G Y +P+G + + + +D + FP P ++ PER
Sbjct: 317 CARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER 376
Query: 464 FDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 512
N + A+ FG G CIG+KF + ++K L + R+Y F
Sbjct: 377 ---NMKLVDG----AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDF 418
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 339 ISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKF 398
+ A E L G TTS L +Y +A V+ L E+ R+ + Q
Sbjct: 277 VKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLN-ARRQAEGDISKMLQMV 335
Query: 399 PYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDK 458
P L IKE +R++ +S + R ++ + Y +P T V +A+ + +D F PDK
Sbjct: 336 PLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDK 395
Query: 459 FKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
F P R+ + K L FG G R C+G++ A E+ L LIH+ N+
Sbjct: 396 FDPTRW---LSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 444
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 15/142 (10%)
Query: 83 KRYGPIFRFHMGRQPLIIVADPELCREVGIKKFK-DIPNR-SVPSPIAASPLHQK--GLF 138
++YGPI+R +G + + PE + KF+ P R +P +A +QK G+
Sbjct: 45 QKYGPIYREKLGNLESVYIIHPEDV--AHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVL 102
Query: 139 FTRDGKWSAMRNTI-LSFYQPTHLASLVPTMQ-------SIIESATQNIESSKVENITFS 190
F + G W R + P + + +P + S++ + S K
Sbjct: 103 FKKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKE 162
Query: 191 NLALTLATDTIGQAAFGVNFGL 212
+L A ++I FG G+
Sbjct: 163 DL-FHFAFESITNVMFGERLGM 183
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 102/234 (43%), Gaps = 2/234 (0%)
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDY 338
+PG + R + + +I +K +++ +Q + + ++ + + T D
Sbjct: 193 LPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDE 252
Query: 339 ISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKF 398
++ + LLAG T+S + + + +A ++ K E L P D +
Sbjct: 253 VAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDL 312
Query: 399 PYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDK 458
LD+ IKE +R+ ++ R + GY +P G V ++ V + ++ E
Sbjct: 313 NLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLD 372
Query: 459 FKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVF 512
F P+R+ + + ++ AY+PFG G CIG+ FA +IK + R Y F
Sbjct: 373 FNPDRYLQDNPASGEKF--AYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEF 424
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 55 VPGPP----PIPLVGHIPLLARYGPEVFSVLAKRYGPIFRFHM 93
V PP PIP +GH + E ++YGP+F F M
Sbjct: 10 VKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTM 52
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 305 RMKESKQGSKDLLSLIVKARELETESKNVFTPDYISA-------------------VTYE 345
R E++ + +LS I+ AR+ +K+ T D +S +
Sbjct: 214 RCHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 346 HLLAGSATTSFALS-SIVYLVAAHPEVENKLLA---EIDGFGPRELVPTALDLQQKFPYL 401
+ AG T+S + S+++L+ HP L A EI+ F P +L ++ + P+
Sbjct: 274 AMFAGQHTSSITTTWSMLHLM--HPANVKHLEALRKEIEEF-PAQL--NYNNVMDEMPFA 328
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
++ +E++R ++ R+ +V++G Y +PKG + + + D + FPEP ++ P
Sbjct: 329 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 388
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
ER D E A ++ FG G CIGQKF + ++K L +R+Y F+
Sbjct: 389 ER-DEKVEGA-------FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQ 432
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 8/247 (3%)
Query: 272 FRQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGS-KDLL-SLIVKARELE-T 328
F IL+ +P + N+K + ++V + K ++G +D+ SLI +E +
Sbjct: 209 FIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLD 268
Query: 329 ESKNV-FTPDYISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVENKLLAEIDGFGPRE 386
E+ NV + + I + + AG T + A+S S++YLV +P V+ K+ E+D R
Sbjct: 269 ENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVM-NPRVQRKIQEELDTVIGRS 327
Query: 387 LVPTALDLQQKFPYLDQVIKEAMRIYLVSPL-VARETAKEVEIGGYRLPKGTWVWLALGV 445
P D + PY++ I E R P + T ++ + G+ +PKG V++
Sbjct: 328 RRPRLSD-RSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQ 386
Query: 446 VAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIH 505
+ D K + P +F PERF + + FG+G R CIG+ A E+ L L
Sbjct: 387 INHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAI 446
Query: 506 LYRNYVF 512
L + F
Sbjct: 447 LLQRVEF 453
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%)
Query: 56 PGPPPIPLVGHIPLLARYGPEVFSVLAKRYGPIFRFHMGRQPLIIVADPELCREVGIKKF 115
PGP PL+GH+ L + S ++++YG + + +G P+++++ + R+ +++
Sbjct: 14 PGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQG 73
Query: 116 KDIPNR 121
D R
Sbjct: 74 DDFKGR 79
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 339 ISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKF 398
I A E L G TTS L +Y +A + +V++ L AE+ + A LQ
Sbjct: 276 IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL-V 334
Query: 399 PYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDK 458
P L IKE +R++ +S + R ++ + Y +P T V +A+ + ++ F
Sbjct: 335 PLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFF----- 389
Query: 459 FKPERFDPNCEEAKQRHPCAY--LPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
F PE FDP +K ++ + L FG G R C+G++ A E+ + LI++ N+
Sbjct: 390 FDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 8/174 (4%)
Query: 339 ISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKF 398
I A E L G TTS L +Y +A + +V++ L AE+ + A LQ
Sbjct: 273 IKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL-V 331
Query: 399 PYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDK 458
P L IKE +R++ +S + R ++ + Y +P T V +A+ + ++ F
Sbjct: 332 PLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFF----- 386
Query: 459 FKPERFDPNCEEAKQRHPCAY--LPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
F PE FDP +K ++ + L FG G R C+G++ A E+ + LI++ N+
Sbjct: 387 FDPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 172/420 (40%), Gaps = 53/420 (12%)
Query: 86 GPIFRFHMGRQPLIIVADPELCREVGIKKFKDI----PNRSVPSPIAASPLHQK---GLF 138
GPIFR+++G ++ V PE ++K + + P R + P A H+ G+F
Sbjct: 50 GPIFRYNLGGPRMVCVMLPE-----DVEKLQQVDSLHPCRMILEPWVAYRQHRGHKCGVF 104
Query: 139 FTRDGKWSAMRNTIL-SFYQPTHLASLVPTMQSIIESATQNIESSKVENITFSNLALTLA 197
+W R + P + +P + ++ +Q ++ ++N S L L +
Sbjct: 105 LLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGS-LTLDVQ 163
Query: 198 TDTIGQAAFGVNFGLSSKPESITDSIGIADNQRDGTAVLDFINQ---HIYSTTQLKMDXX 254
N L + +G+ + +A L+F++ ST QL
Sbjct: 164 PSIFHYTIEASNLAL------FGERLGLVGHS-PSSASLNFLHALEVMFKSTVQLMFMPR 216
Query: 255 XXXXXXXXXXXXXXQEPFRQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSK 314
++ K D + + + E+ F R + +
Sbjct: 217 SLSRWISP-----------KVWKEHFEAWDCIFQYGDNCIQKIYQELAFNR---PQHYTG 262
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSA-TTSFALSSIVYLVAAHPEVEN 373
+ L++KA EL E+ I A + E L AGS TT+F L ++ +A +P+V+
Sbjct: 263 IVAELLLKA-ELSLEA--------IKANSME-LTAGSVDTTAFPLLMTLFELARNPDVQ- 311
Query: 374 KLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRL 433
++L + + + P L +KE +R+Y V + R + ++ + Y +
Sbjct: 312 QILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHI 371
Query: 434 PKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQK 493
P GT V + L + +++ FP P+++ P+R+ + H ++PFG G R C+G++
Sbjct: 372 PAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFH---HVPFGFGMRQCLGRR 428
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 31/211 (14%)
Query: 295 SGRLDEIVFKRMKESKQG-SKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSAT 353
S +L + + +KE + DL+S++ + E E + D I A+ LLA +
Sbjct: 218 SEQLSQYLMPVIKERRVNPGSDLISILCTS---EYEGMALSDKD-ILALILNVLLAATEP 273
Query: 354 TSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYL 413
L+ ++Y + +PE N +LA+ R LVP A I E +R
Sbjct: 274 ADKTLALMIYHLLNNPEQMNDVLAD------RSLVPRA-------------IAETLRYKP 314
Query: 414 VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEA-- 471
L+ R+ +++ +GG + K T V+ +G +D + F +PD F R D + A
Sbjct: 315 PVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFS 374
Query: 472 -KQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
RH L FG G C+G FA EI++
Sbjct: 375 GAARH----LAFGSGIHNCVGTAFAKNEIEI 401
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 38/204 (18%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
E++ KR + +Q D++S+++K RE K+ T + ++ +AG TT +S
Sbjct: 193 ELIQKRKRHPQQ---DMISMLLKGRE-----KDKLTEEEAASTCILLAIAGHETTVNLIS 244
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA 419
+ V + HPE KL D L+ TA ++E +R + + A
Sbjct: 245 NSVLCLLQHPEQLLKLRENPD------LIGTA-------------VEECLRYESPTQMTA 285
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY 479
R +++++I G + +G V+L LG +D F PD F R P +
Sbjct: 286 RVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFD-----------ITRSPNPH 334
Query: 480 LPFGIGPRACIGQKFAMQEIKLSL 503
L FG G C+G A E ++++
Sbjct: 335 LSFGHGHHVCLGSSLARLEAQIAI 358
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
++V +R E DLLS +++ ++ + + D ++++ LLAG T+ +
Sbjct: 198 DLVERRRTEP---GDDLLSALIRVQD---DDDGRLSADELTSIALVLLLAGFETSVSLIG 251
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP-YLDQVIKEAMRIYLVSPLV 418
YL+ HP+ L L ++ P L ++E +R
Sbjct: 252 IGTYLLLTHPD--------------------QLALVRRDPSALPNAVEEILRYIAPPETT 291
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R A+EVEIGG +P+ + V +A G +D K FP+P +F R
Sbjct: 292 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD-----------VTRDTRG 340
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+L FG G C+G+ A E +++L L+ +
Sbjct: 341 HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 298 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFA 357
L +V ++ E + G D L AR+LE + D + + L+AG TT A
Sbjct: 199 LHGLVGRKQAEPEDGLLDELI----ARQLE---EGDLDHDEVVMIALVLLVAGHETTVNA 251
Query: 358 LSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL 417
++ + HPE + LL + P A+ V++E +R VS
Sbjct: 252 IALGALTLIQHPEQIDVLLRD----------PGAVS---------GVVEELLRFTSVSDH 292
Query: 418 VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPC 477
+ R +++E+GG + G V +++ ++ +D+K + PD F R RH
Sbjct: 293 IVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--------NARH-- 342
Query: 478 AYLPFGIGPRACIGQKFAMQEIKLSLIHLY 507
++ FG G C+GQ A E++++L L+
Sbjct: 343 -HVGFGHGIHQCLGQNLARAELEIALGGLF 371
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
++V +R E DLLS +++ ++ + + D ++++ LLAG ++ +
Sbjct: 197 DLVERRRTEP---GDDLLSALIRVQD---DDDGRLSADELTSIALVLLLAGFESSVSLIG 250
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP-YLDQVIKEAMRIYLVSPLV 418
YL+ HP+ L L ++ P L ++E +R
Sbjct: 251 IGTYLLLTHPD--------------------QLALVRRDPSALPNAVEEILRYIAPPETT 290
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R A+EVEIGG +P+ + V +A G +D K FP+P +F R
Sbjct: 291 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD-----------VTRDTRG 339
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+L FG G C+G+ A E +++L L+ +
Sbjct: 340 HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
++V +R E DLLS +++ ++ + + D ++++ LLAG ++ +
Sbjct: 198 DLVERRRTEP---GDDLLSALIRVQD---DDDGRLSADELTSIALVLLLAGFESSVSLIG 251
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP-YLDQVIKEAMRIYLVSPLV 418
YL+ HP+ L L ++ P L ++E +R
Sbjct: 252 IGTYLLLTHPD--------------------QLALVRRDPSALPNAVEEILRYIAPPETT 291
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R A+EVEIGG +P+ + V +A G +D K FP+P +F R
Sbjct: 292 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD-----------VTRDTRG 340
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+L FG G C+G+ A E +++L L+ +
Sbjct: 341 HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 405 IKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF 464
+EA+R+Y + ++ R + + +G RLP+GT L L FPE + F+PERF
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPQGTT--LVLSPYVTQRLYFPEGEAFQPERF 315
Query: 465 DPNCEEAKQRHPCA-YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
A++ P Y PFG+G R C+G+ FA+ E + L +R +
Sbjct: 316 -----LAERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
++V +R E DLLS +++ ++ + + D ++++ LLAG + +
Sbjct: 197 DLVERRRTEP---GDDLLSALIRVQD---DDDGRLSADELTSIALVLLLAGFEASVSLIG 250
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP-YLDQVIKEAMRIYLVSPLV 418
YL+ HP+ L L ++ P L ++E +R
Sbjct: 251 IGTYLLLTHPD--------------------QLALVRRDPSALPNAVEEILRYIAPPETT 290
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R A+EVEIGG +P+ + V +A G +D K FP+P +F R
Sbjct: 291 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD-----------VTRDTRG 339
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+L FG G C+G+ A E +++L L+ +
Sbjct: 340 HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 38/212 (17%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
++V +R E DLLS +++ ++ + + D ++++ LLAG + +
Sbjct: 198 DLVERRRTEP---GDDLLSALIRVQD---DDDGRLSADELTSIALVLLLAGFEASVSLIG 251
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP-YLDQVIKEAMRIYLVSPLV 418
YL+ HP+ L L ++ P L ++E +R
Sbjct: 252 IGTYLLLTHPD--------------------QLALVRRDPSALPNAVEEILRYIAPPETT 291
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R A+EVEIGG +P+ + V +A G +D K FP+P +F R
Sbjct: 292 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD-----------VTRDTRG 340
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+L FG G C+G+ A E +++L L+ +
Sbjct: 341 HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 405 IKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF 464
+EA+R+Y + ++ R + + +G RLP GT L L +FP+ + F+PERF
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPPGTT--LVLSPYVTQRLHFPDGEAFRPERF 315
Query: 465 DPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
E + Y PFG+G R C+G+ FA+ E + L +R +
Sbjct: 316 ----LEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 298 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFA 357
+ +++ +R KE + DL+S +V+AR+ ++ + + + L+AG +T+
Sbjct: 210 MGDLIDRRRKEP---TDDLVSALVQARD----QQDSLSEQELLDLAIGLLVAGYESTTTQ 262
Query: 358 LSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL 417
++ VYL+ PE+ +LL EL+P+A++ ++ L V
Sbjct: 263 IADFVYLLMTRPELRRQLLDRP------ELIPSAVEELTRWVPLG-----------VGTA 305
Query: 418 VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPC 477
V R ++V + G + G V + G +D FP+ D+ +R P
Sbjct: 306 VPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT-----------PN 354
Query: 478 AYLPFGIGPRACIGQKFAMQEIKLSL 503
+L FG G C+G A E++++L
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVAL 380
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 41/205 (20%)
Query: 299 DEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFAL 358
DE++ R KE DL+S +V +L T + D + L+ G+ TT A+
Sbjct: 215 DELITARRKEP---GDDLVSTLVTDDDL-TIDDVLLNCDNV-------LIGGNETTRHAI 263
Query: 359 SSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLV 418
+ V+ +A P + L A DG +D V++E +R + V
Sbjct: 264 TGAVHALATVPGL---LTALRDGSAD----------------VDTVVEEVLRWTSPAMHV 304
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R T +V I G LP GT V L +D F +PD F P R P
Sbjct: 305 LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLP-----------GRKPNR 353
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSL 503
++ FG G C+G A E+ + L
Sbjct: 354 HITFGHGMHHCLGSALARIELSVVL 378
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 38/212 (17%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
++V +R E DLLS ++ ++ + + D ++++ LLAG + +
Sbjct: 197 DLVERRRTEP---GDDLLSALISVQD---DDDGRLSADELTSIALVLLLAGFEASVSLIG 250
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSP-LV 418
YL+ HP+ + A+ P+AL ++E +R Y+ P
Sbjct: 251 IGTYLLLTHPDQLALVRAD----------PSALP---------NAVEEILR-YIAPPETT 290
Query: 419 ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCA 478
R A+EVEIGG +P+ + V +A G +D FP+P +F R
Sbjct: 291 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD-----------VTRDTRG 339
Query: 479 YLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
+L FG G C+G+ A E +++L L+ +
Sbjct: 340 HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 35/219 (15%)
Query: 289 RTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLL 348
+ Q L D +V K + DL S IV+A V + + L+
Sbjct: 198 KVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFH-----DGVLDDYELRTLVATVLV 252
Query: 349 AGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEA 408
AG TT+ L+ +Y A HP+ K+ EL P Q ++E
Sbjct: 253 AGYETTNHQLALAMYDFAQHPDQWMKIKEN------PELAP-------------QAVEEV 293
Query: 409 MRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPN 467
+R P+ A R A++ E+ G R+P GT V++ V +D + F + D+F
Sbjct: 294 LRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF-------- 345
Query: 468 CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHL 506
+ + + FG GP C+G A E+ ++ L
Sbjct: 346 --DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAAL 382
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 35/219 (15%)
Query: 289 RTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLL 348
+ Q L D +V K + DL S IV+A V + + L+
Sbjct: 188 KVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFH-----DGVLDDYELRTLVATVLV 242
Query: 349 AGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEA 408
AG TT+ L+ +Y A HP+ K+ EL P Q ++E
Sbjct: 243 AGYETTNHQLALAMYDFAQHPDQWMKIKEN------PELAP-------------QAVEEV 283
Query: 409 MRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPN 467
+R P+ A R A++ E+ G R+P GT V++ V +D + F + D+F
Sbjct: 284 LRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF-------- 335
Query: 468 CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHL 506
+ + + FG GP C+G A E+ ++ L
Sbjct: 336 --DITVKREAPSIAFGGGPHFCLGTALARLELTEAVAAL 372
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 398 FPYLDQVIKEAMRIYLVSPLVARETAKE-----VEIGGYRLPKGTWVWLALGVVAKDSKN 452
P LD +IKE++R L S + TAKE +E G Y + K + L ++ D +
Sbjct: 326 LPVLDSIIKESLR--LSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEI 383
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCA-------YLPFGIGPRACIGQKFAMQEIKLSLI 504
+P+P FK +R+ + K C Y+PFG G C G+ FA+ EIK LI
Sbjct: 384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLI 442
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 398 FPYLDQVIKEAMRIYLVSPLVARETAKE-----VEIGGYRLPKGTWVWLALGVVAKDSKN 452
P LD +IKE++R L S + TAKE +E G Y + K + L ++ D +
Sbjct: 326 LPVLDSIIKESLR--LSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEI 383
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCA-------YLPFGIGPRACIGQKFAMQEIKLSLI 504
+P+P FK +R+ + K C Y+PFG G C G+ FA+ EIK LI
Sbjct: 384 YPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLI 442
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 35/206 (16%)
Query: 298 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFA 357
+ +++ +R KE + DL+S +V+AR+ ++ + + + L+AG +T+
Sbjct: 210 MGDLIDRRRKEP---TDDLVSALVQARD----QQDSLSEQELLDLAIGLLVAGYESTTTQ 262
Query: 358 LSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL 417
++ VYL+ PE+ +LL EL+P+A++ ++ L V
Sbjct: 263 IADFVYLLMTRPELRRQLLDRP------ELIPSAVEELTRWVPLG-----------VGTA 305
Query: 418 VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPC 477
R ++V + G + G V + G +D FP+ D+ +R P
Sbjct: 306 APRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT-----------PN 354
Query: 478 AYLPFGIGPRACIGQKFAMQEIKLSL 503
+L FG G C+G A E++++L
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVAL 380
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 35/206 (16%)
Query: 298 LDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFA 357
+ +++ +R KE + DL+S +V+AR+ ++ + + + L+AG +T+
Sbjct: 210 MGDLIDRRRKEP---TDDLVSALVQARD----QQDSLSEQELLDLAIGLLVAGYESTTTQ 262
Query: 358 LSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPL 417
++ VYL+ PE+ +LL EL+P+A++ ++ L V
Sbjct: 263 IADFVYLLMTRPELRRQLLDRP------ELIPSAVEELTRWVPLG-----------VGTA 305
Query: 418 VARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPC 477
R ++V + G + G V + G +D FP+ D+ +R P
Sbjct: 306 FPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRT-----------PN 354
Query: 478 AYLPFGIGPRACIGQKFAMQEIKLSL 503
+L FG G C+G A E++++L
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVAL 380
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 34/190 (17%)
Query: 314 KDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVEN 373
+DL+S +V E S + T D I A L+AG TT V L+A N
Sbjct: 225 EDLMSGLVAVEE----SGDQLTEDEIIATCNLLLIAGHETT-------VNLIA------N 267
Query: 374 KLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRL 433
LA + P + A D + VI+E MR LV+R ++ IG + +
Sbjct: 268 AALAMLRT--PGQWAALAADGSRA----SAVIEETMRYDPPVQLVSRYAGDDLTIGTHTV 321
Query: 434 PKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQK 493
PKG + L L +D PD+F P+R A+ RH L FG G C+G
Sbjct: 322 PKGDTMLLLLAAAHRDPTIVGAPDRFDPDR-------AQIRH----LGFGKGAHFCLGAP 370
Query: 494 FAMQEIKLSL 503
A E ++L
Sbjct: 371 LARLEATVAL 380
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 337 DYISAVTYEHLLAGSATTSFALSSI-VYLVAAHPEVENKLLAEIDGFGPRELV--PTALD 393
D ISA+ G F +++ L+AAH A + G G L+ P L
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAH-----DTTACMIGLGTALLLDSPDQLA 261
Query: 394 LQQKFPYL-DQVIKEAMRIYLVSPLVARETA-KEVEIGGYRLPKGTWVWLALGVVAKDSK 451
L ++ P L ++E +R + A ++VE+GG R+ KG V +A + A
Sbjct: 262 LLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV-VAHVLAADFDP 320
Query: 452 NFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
F E +PERFD R P +L FG G CIGQ+ A E+++ L+R
Sbjct: 321 AFVE----EPERFDIT------RRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 337 DYISAVTYEHLLAGSATTSFALSSI-VYLVAAHPEVENKLLAEIDGFGPRELV--PTALD 393
D ISA+ G F +++ L+AAH A + G G L+ P L
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAH-----DTTACMIGLGTALLLDSPDQLA 261
Query: 394 LQQKFPYL-DQVIKEAMRIYLVSPLVARETA-KEVEIGGYRLPKGTWVWLALGVVAKDSK 451
L ++ P L ++E +R + A ++VE+GG R+ KG V +A + A
Sbjct: 262 LLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV-VAHVLAADFDP 320
Query: 452 NFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
F E +PERFD R P +L FG G CIGQ+ A E+++ L+R
Sbjct: 321 AFVE----EPERFDIT------RRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 337 DYISAVTYEHLLAGSATTSFALSSI-VYLVAAHPEVENKLLAEIDGFGPRELV--PTALD 393
D ISA+ G F +++ L+AAH A + G G L+ P L
Sbjct: 207 DLISALITTEDPDGVVDDMFLMNAAGTLLIAAH-----DTTACMIGLGTALLLDSPDQLA 261
Query: 394 LQQKFPYL-DQVIKEAMRIYLVSPLVARETA-KEVEIGGYRLPKGTWVWLALGVVAKDSK 451
L ++ P L ++E +R + A ++VE+GG R+ KG V +A + A
Sbjct: 262 LLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQV-VAHVLAADFDP 320
Query: 452 NFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
F E +PERFD R P +L FG G CIGQ+ A E+++ L+R
Sbjct: 321 AFVE----EPERFDIT------RRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 303 FKRMKESKQG--SKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSS 360
R+ +SK+G +DLLS +V+ + E + T + + + + L+AG TT +++
Sbjct: 218 LSRLIDSKRGQDGEDLLSALVRTSD---EDGSRLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 361 IVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYL-VSPLVA 419
+Y + +HP ++L A L+ LD ++E +R V
Sbjct: 275 GMYALLSHP---DQLAA----------------LRADMTLLDGAVEEMLRYEGPVESATY 315
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY 479
R + V++ G +P G V + L + + FP+P +F +R +
Sbjct: 316 RFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD-----------IRRDTAGH 364
Query: 480 LPFGIGPRACIGQKFAMQEIKLSL 503
L FG G CIG A E ++++
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAV 388
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 303 FKRMKESKQG--SKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSS 360
R+ +SK+G +DLLS +V+ + E + T + + + + L+AG TT +++
Sbjct: 218 LSRLIDSKRGQDGEDLLSALVRTSD---EDGSRLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 361 IVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYL-VSPLVA 419
+Y + +HP ++L A L+ LD ++E +R V
Sbjct: 275 GMYALLSHP---DQLAA----------------LRADMTLLDGAVEEMLRYEGPVESATY 315
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY 479
R + V++ G +P G V + L + + FP+P +F +R +
Sbjct: 316 RFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD-----------IRRDTAGH 364
Query: 480 LPFGIGPRACIGQKFAMQEIKLSL 503
L FG G CIG A E ++++
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAV 388
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 303 FKRMKESKQG--SKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSS 360
R+ +SK+G +DLLS +V+ + E + T + + + + L+AG TT +++
Sbjct: 218 LSRLIDSKRGQDGEDLLSALVRTSD---EDGSRLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 361 IVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYL-VSPLVA 419
+Y + +HP ++L A L+ LD ++E +R V
Sbjct: 275 GMYALLSHP---DQLAA----------------LRADMTLLDGAVEEMLRYEGPVESATY 315
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY 479
R + V++ G +P G V + L + + FP+P +F +R +
Sbjct: 316 RFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFD-----------IRRDTAGH 364
Query: 480 LPFGIGPRACIGQKFAMQEIKLSL 503
L FG G CIG A E ++++
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAV 388
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 337 DYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLA-EIDGFGPRELVPTALDLQ 395
D IS + +HL+ G+ TT LS++ + A E ++A R +P +L+
Sbjct: 219 DLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPA--ELR 276
Query: 396 QKFPYLDQVIKEAMRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFP 454
+ + + E +R+ V+ + R A+++E+ G +P V L D + F
Sbjct: 277 KDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFD 336
Query: 455 EPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
+P++ R D + ++ FG G C+GQ A E++++L L R
Sbjct: 337 DPERVDFHRTDNH-----------HVAFGYGVHQCVGQHLARLELEVALETLLR 379
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 293 KLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSA 352
KL G L +++ ++ E LLS ++ + E + + + + A+ L+AG
Sbjct: 186 KLHGYLSDLLERKRTEPDDA---LLSSLLAVSD---EDGDRLSQEELVAMAMLLLIAGHE 239
Query: 353 TTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 412
TT + + V + HP+ + KLLAE L+ +A+ ++F D + +A
Sbjct: 240 TTVNLIGNGVLALLTHPD-QRKLLAE-----DPSLISSAV---EEFLRFDSPVSQA---- 286
Query: 413 LVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAK 472
P+ R TA++V G +P G V L L +D+ PEPD+
Sbjct: 287 ---PI--RFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD-----------I 330
Query: 473 QRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
R + FG G C+G + A E ++++ L+ +
Sbjct: 331 TRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 293 KLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSA 352
KL G L +++ ++ E LLS ++ +++ + + + + A+ L+AG
Sbjct: 186 KLHGYLSDLLERKRTEPDDA---LLSSLLAVSDMDGDR---LSQEELVAMAMLLLIAGHE 239
Query: 353 TTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIY 412
TT + + V + HP+ + KLLAE L+ +A+ ++F D + +A
Sbjct: 240 TTVNLIGNGVLALLTHPD-QRKLLAE-----DPSLISSAV---EEFLRFDSPVSQA---- 286
Query: 413 LVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAK 472
P+ R TA++V G +P G V L L +D+ PEPD+
Sbjct: 287 ---PI--RFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLD-----------I 330
Query: 473 QRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
R + FG G C+G + A E ++++ L+ +
Sbjct: 331 TRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 46/197 (23%)
Query: 347 LLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
++AG+ TT A++ V ++ +PE ++ ++ DG L PTA ++++++
Sbjct: 272 VVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDG-----LAPTA---------VEEIVR 317
Query: 407 EAMRIYLVSPLV--ARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERF 464
A SP+V R +++E+ G ++ G V L +D F +P F
Sbjct: 318 WA------SPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFD---- 367
Query: 465 DPNCEEAKQRHPCAYLPF-GIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDM---EN 520
R+P +L F G G C+G A +EI+++ L R PD+ E
Sbjct: 368 -------LARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQM-----PDVVATEE 415
Query: 521 PLELEFGIILNFKHGVK 537
P L + F HG+K
Sbjct: 416 PARL----LSQFIHGIK 428
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 42/224 (18%)
Query: 289 RTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLL 348
R +L +D+++ + KES+ G DL S + + E T D+ V+ LL
Sbjct: 192 RAFAELRAYIDDLITR--KESEPGD-DLFSRQIARQRQEG------TLDHAGLVSLAFLL 242
Query: 349 --AGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIK 406
AG TT+ +S V + +HPE + ++ G P ++
Sbjct: 243 LTAGHETTANMISLGVVGLLSHPE-QLTVVKANPGRTP------------------MAVE 283
Query: 407 EAMRIYLVSP-LVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFD 465
E +R + ++ + +R ++VEIGG + G V +++ D F +P ER
Sbjct: 284 ELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER-- 341
Query: 466 PNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRN 509
RH +L FG GP C+GQ A E+++ L+R
Sbjct: 342 ------GARH---HLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 401 LDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFK 460
L +++EA+R R A + E+ G ++ G W+ L D FPEP KF
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFD 381
Query: 461 PERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
P R RH L FG G C+G A E+++ L
Sbjct: 382 PTR-------PANRH----LAFGAGSHQCLGLHLARLEMRVLL 413
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 48/227 (21%)
Query: 279 IPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLS-LIVKARELETESKNVFTPD 337
I D N ++ RL EI K G ++L+ +K R+L + K
Sbjct: 129 IGNKRDENFNYVNNRMVSRLLEI----FKSDSHGIINVLAGSSLKNRKLTMDEK----IK 180
Query: 338 YISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQK 397
YI + ++ G+ TT+ + +++ ++ +P++ + L GF
Sbjct: 181 YIMLL----IIGGNETTTNLIGNMIRVIDENPDIIDDALKNRSGF--------------- 221
Query: 398 FPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEP 456
++E +R Y + L R A++ I ++ KG V + LG +D F EP
Sbjct: 222 -------VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEP 274
Query: 457 DKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
D FK R ++ H L FGIG C+G A E ++L
Sbjct: 275 DLFKIGR--------REMH----LAFGIGIHMCLGAPLARLEASIAL 309
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 16/185 (8%)
Query: 329 ESKNVFTPDYISAVTYEHLLAGSATTSFALSSI-VYLVAAHPEVENKLLAEIDGFGPREL 387
E K V D ++ + AG T S A+++I V+ H + + + I+ F R
Sbjct: 195 EDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPE 254
Query: 388 VPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA 447
V TA + +I E +R+ R ++VEIGG + G+ + +G
Sbjct: 255 VFTAF--RNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAAN 312
Query: 448 KDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY--LPFGIGPRACIGQKFAMQEIKLSLIH 505
+D + F +PD F R P A L FG+GP +C GQ + E
Sbjct: 313 RDPEVFDDPDVFD-----------HTRPPAASRNLSFGLGPHSCAGQIISRAEATTVFAV 361
Query: 506 LYRNY 510
L Y
Sbjct: 362 LAERY 366
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 16/185 (8%)
Query: 329 ESKNVFTPDYISAVTYEHLLAGSATTSFALSSI-VYLVAAHPEVENKLLAEIDGFGPREL 387
E K V D ++ + AG T S A+++I V+ H + + + I+ F R
Sbjct: 193 EDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFARRPE 252
Query: 388 VPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA 447
V TA + +I E +R+ R ++VEIGG + G+ + +G
Sbjct: 253 VFTAF--RNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAAN 310
Query: 448 KDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY--LPFGIGPRACIGQKFAMQEIKLSLIH 505
+D + F +PD F R P A L FG+GP +C GQ + E
Sbjct: 311 RDPEVFDDPDVFD-----------HTRPPAASRNLSFGLGPHSCAGQIISRAEATTVFAV 359
Query: 506 LYRNY 510
L Y
Sbjct: 360 LAERY 364
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 32/176 (18%)
Query: 334 FTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD 393
T D ++ + L AG + + + + V L+AAHP+ LA+ D
Sbjct: 226 LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD------------- 272
Query: 394 LQQKFPYLDQVIKEAMRIYLV--SPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSK 451
+ + ++E +R S L R ++++E GG + G V LG+ D +
Sbjct: 273 ------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDER 326
Query: 452 NFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLY 507
F P++F R P +L FG G CIG A E++ L+
Sbjct: 327 AFTGPEEFD-----------AARTPNPHLTFGHGIWHCIGAPLARLELRTMFTKLF 371
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 42/219 (19%)
Query: 300 EIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS 359
+++ KR E + DL S++V + E E + + + D I T L+ G TT LS
Sbjct: 191 DVITKRRAEP---TDDLFSVLVNS---EVEGQRM-SDDEIVFETLLILIGGDETTRHTLS 243
Query: 360 SIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA 419
+ H + + L+A++D L+P A I+E +R +
Sbjct: 244 GGTEQLLRHRDQWDALVADVD------LLPGA-------------IEEMLRWTSPVKNMC 284
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY 479
R + G L G + L D F +PD F+ +R +P ++
Sbjct: 285 RTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDR-----------NPNSH 333
Query: 480 LPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDM 518
+ FG G C+G + A E++ L V R PD+
Sbjct: 334 VAFGFGTHFCLGNQLARLELR-----LMTERVLRRLPDL 367
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 334 FTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD 393
TPD + L AG TT + + VY +A P +L ++ PT
Sbjct: 234 ITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSD----------PT--- 280
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
+EA+R R T +EVE+GG + +G V + LG +D + +
Sbjct: 281 ------LARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRW 334
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+PD + R ++ FG G C+GQ A E ++ L L R
Sbjct: 335 SDPDLYD-----------ITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVA-- 381
Query: 514 HSPDMENPLELEFGIIL 530
+ D++ P++ F L
Sbjct: 382 -AIDIDGPVKRRFNNTL 397
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 34/183 (18%)
Query: 321 VKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEID 380
V+AR+ + + + D I L AG TT+ L+ V + AH +V ++L
Sbjct: 230 VRARD----TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP- 284
Query: 381 GFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVW 440
E P A ++E MR V R +++ +G + +P+G+ V
Sbjct: 285 -----ESTPAA-------------VEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVV 326
Query: 441 LALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIK 500
LG +D FP+PD + A +R + FG+G C+G A E +
Sbjct: 327 ALLGSANRDPARFPDPDVL-------DVHRAAERQ----VGFGLGIHYCLGATLARAEAE 375
Query: 501 LSL 503
+ L
Sbjct: 376 IGL 378
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 76/198 (38%), Gaps = 48/198 (24%)
Query: 314 KDLLSLIVKA----RELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHP 369
DL+S +V A R L+ E F+ LLAG TT+ L +IV + HP
Sbjct: 230 DDLISRLVLAEVDGRALDDEEAANFSTAL--------LLAGHITTTVLLGNIVRTLDEHP 281
Query: 370 EVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIG 429
AE G P +++E +R P + R T K E+
Sbjct: 282 -AHWDAAAEDPGRIP------------------AIVEEVLRYRPPFPQMQRTTTKATEVA 322
Query: 430 GYRLPK----GTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIG 485
G +P TWV A +DS +PD+F P R + A L FG G
Sbjct: 323 GVPIPADVMVNTWVLSA----NRDSDAHDDPDRFDPSR---------KSGGAAQLSFGHG 369
Query: 486 PRACIGQKFAMQEIKLSL 503
C+G A E +++L
Sbjct: 370 VHFCLGAPLARLENRVAL 387
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 48/198 (24%)
Query: 314 KDLLSLIVKA----RELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHP 369
DL+S +V A R L+ E F+ +A+ LLAG TT+ L +IV + HP
Sbjct: 210 DDLISRLVLAEVDGRALDDEEAANFS----TAL----LLAGHITTTVLLGNIVRTLDEHP 261
Query: 370 EVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIG 429
AE G P +++E +R P + R T K E+
Sbjct: 262 -AHWDAAAEDPGRIP------------------AIVEEVLRYRPPFPQMQRTTTKATEVA 302
Query: 430 GYRLPK----GTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIG 485
G +P TWV A +DS +PD+F P R + A L FG G
Sbjct: 303 GVPIPADVMVNTWVLSA----NRDSDAHDDPDRFDPSR---------KSGGAAQLSFGHG 349
Query: 486 PRACIGQKFAMQEIKLSL 503
C+G A E +++L
Sbjct: 350 VHFCLGAPLARLENRVAL 367
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 269 QEPFRQILKRIPGTMDWKVERTNQK-LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELE 327
E F+ KR+ + D + T + L+G LD ++ + E G +V A +
Sbjct: 170 HEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAG-------LVGALVAD 222
Query: 328 TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPREL 387
+ + + + L+AG TT+ S V + HPE L A+ R L
Sbjct: 223 QLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD------RSL 276
Query: 388 VPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVV 446
VP A ++E +R ++ + R ++E+ G + G V + +
Sbjct: 277 VPGA-------------VEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 447 AKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
+D + +PD R RH +L FG G C+GQ A E+++ L
Sbjct: 324 NRDGTVYEDPDALDIHR--------SARH---HLAFGFGVHQCLGQNLARLELEVIL 369
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 269 QEPFRQILKRIPGTMDWKVERTNQK-LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELE 327
E F+ KR+ + D + T + L+G LD ++ + E G +V A +
Sbjct: 170 HEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAG-------LVGALVAD 222
Query: 328 TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPREL 387
+ + + + L+AG TT+ S V + HPE L A+ R L
Sbjct: 223 QLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD------RSL 276
Query: 388 VPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVV 446
VP A ++E +R ++ + R ++E+ G + G V + +
Sbjct: 277 VPGA-------------VEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 447 AKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
+D + +PD R RH +L FG G C+GQ A E+++ L
Sbjct: 324 NRDGTVYEDPDALDIHR--------SARH---HLAFGFGVHQCLGQNLARLELEVIL 369
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 269 QEPFRQILKRIPGTMDWKVERTNQK-LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELE 327
E F+ KR+ + D + T + L+G LD ++ + E G +V A +
Sbjct: 170 HEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAG-------LVGALVAD 222
Query: 328 TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPREL 387
+ + + + L+AG TT+ S V + HPE L A+ R L
Sbjct: 223 QLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD------RSL 276
Query: 388 VPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVV 446
VP A ++E +R ++ + R ++E+ G + G V + +
Sbjct: 277 VPGA-------------VEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 447 AKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
+D + +PD R RH +L FG G C+GQ A E+++ L
Sbjct: 324 NRDGTVYEDPDALDIHR--------SARH---HLAFGFGVHQCLGQNLARLELEVIL 369
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 269 QEPFRQILKRIPGTMDWKVERTNQK-LSGRLDEIVFKRMKESKQGSKDLLSLIVKARELE 327
E F+ KR+ + D + T + L+G LD ++ + E G +V A +
Sbjct: 170 HEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAG-------LVGALVAD 222
Query: 328 TESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPREL 387
+ + + + L+AG TT+ S V + HPE L A+ R L
Sbjct: 223 QLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD------RSL 276
Query: 388 VPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA-RETAKEVEIGGYRLPKGTWVWLALGVV 446
VP A ++E +R ++ + R ++E+ G + G V + +
Sbjct: 277 VPGA-------------VEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIA 323
Query: 447 AKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
+D + +PD R RH +L FG G C+GQ A E+++ L
Sbjct: 324 NRDGTVYEDPDALDIHR--------SARH---HLAFGFGVHQCLGQNLARLELEVIL 369
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 187 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 239
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 240 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 280
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + S L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 281 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 338
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 339 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 386
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 387 YTPLNRDVGIV 397
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 38/194 (19%)
Query: 338 YISAVTY--EHLLAGSATTSFALSS-----------IVYLVAAHPEVENKLLAEIDGFGP 384
Y+ + Y +HL +G+ S ++S I+ L+A + N + + F
Sbjct: 168 YLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDF-- 225
Query: 385 RELVPTALDLQQKFP----YLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVW 440
T +L Q+ YL + I+EA+R R+T + V++G + +G +V
Sbjct: 226 -----TRFNLWQRIREENLYL-KAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVR 279
Query: 441 LALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIK 500
+ + +D + F + +KF P+ R+P +L FG G C+G A E +
Sbjct: 280 VWIASANRDEEVFHDGEKFIPD-----------RNPNPHLSFGSGIHLCLGAPLARLEAR 328
Query: 501 LSLIHLYRNYVFRH 514
+++ + FRH
Sbjct: 329 IAIEEFSKR--FRH 340
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 38/194 (19%)
Query: 338 YISAVTY--EHLLAGSATTSFALSS-----------IVYLVAAHPEVENKLLAEIDGFGP 384
Y+ + Y +HL +G+ S ++S I+ L+A + N + + F
Sbjct: 168 YLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDF-- 225
Query: 385 RELVPTALDLQQKFP----YLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVW 440
T +L Q+ YL + I+EA+R R+T + V++G + +G +V
Sbjct: 226 -----TRFNLWQRIREENLYL-KAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVR 279
Query: 441 LALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIK 500
+ + +D + F + +KF P+ R+P +L FG G C+G A E +
Sbjct: 280 VWIASANRDEEVFHDGEKFIPD-----------RNPNPHLSFGSGIHLCLGAPLARLEAR 328
Query: 501 LSLIHLYRNYVFRH 514
+++ + FRH
Sbjct: 329 IAIEEFSKR--FRH 340
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 38/229 (16%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENK 374
D L+++V+ R +E + D IS + E + G+ S A+ L+ A N
Sbjct: 192 DYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAG----NA 241
Query: 375 LLAEIDGFGPRELV--PTALDLQQKFPYLD-QVIKEAMRIYLVSPLVARETAKEVEIGGY 431
++ + G L P L + P L Q ++E R + S L + TAKE + G
Sbjct: 242 VMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGD 301
Query: 432 RLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACI 490
+L + +A A +D + F PD+F R P P L FG G CI
Sbjct: 302 KLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP---------PQDPLGFGFGDHRCI 352
Query: 491 GQKFAMQEIKLSLIHLYRNYVFRHSPDME----------NPLELEFGII 529
+ A E+ LY+ + PD++ PL + GI+
Sbjct: 353 AEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKINYTPLNRDVGIV 396
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 186 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 238
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 239 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 279
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + S L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 337
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 338 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 385
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 386 YTPLNRDVGIV 396
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 188 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 240
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 241 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 281
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + S L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 282 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 339
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 340 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 387
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 388 YTPLNRDVGIV 398
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 34/187 (18%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENK 374
D++SL+ ++ N YI+A AG TTS + + ++ +PE
Sbjct: 237 DVMSLLANSKL----DGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPE--QL 290
Query: 375 LLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLP 434
LA+ D L+P +++ EA+R R + E+ G +
Sbjct: 291 ALAKSDP----ALIP-------------RLVDEAVRWTAPVKSFMRTALADTEVRGQNIK 333
Query: 435 KGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKF 494
+G + L+ +D + F PD+F RF P +L FG G C+GQ
Sbjct: 334 RGDRIMLSYPSANRDEEVFSNPDEFDITRF-----------PNRHLGFGWGAHMCLGQHL 382
Query: 495 AMQEIKL 501
A E+K+
Sbjct: 383 AKLEMKI 389
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 187 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 239
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 240 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 280
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + S L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 281 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 338
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 339 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 386
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 387 YTPLNRDVGIV 397
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 186 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 238
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 239 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 279
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + S L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 337
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 338 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 385
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 386 YTPLNRDVGIV 396
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVEN 373
D L+++V+ R +E + D IS + E + G+ S A+ + + LVA + + N
Sbjct: 192 DYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNANMVN 245
Query: 374 KLLAEIDGFGPRELVPTALDLQQKFPYLD-QVIKEAMRIYLVSPLVARETAKEVEIGGYR 432
+ + P L + P L Q ++E R + S L + TAKE + G +
Sbjct: 246 MIALGVATLAQH---PDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDK 302
Query: 433 LPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIG 491
L + +A A +D + F PD+F R P P L FG G CI
Sbjct: 303 LVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP---------PQDPLGFGFGDHRCIA 353
Query: 492 QKFAMQEIKLSLIHLYRNYVFRHSPDME----------NPLELEFGII 529
+ A E+ LY+ + PD++ PL + GI+
Sbjct: 354 EHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKINYTPLNRDVGIV 396
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 288 ERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHL 347
ER +++ +++ R + + LL V E+ T S+ V AV +
Sbjct: 189 ERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEI-TLSEAVGL-----AVLLQ-- 240
Query: 348 LAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-LQQKFPYLDQVIK 406
+ G A T+ + + +L+ + PE+ +L +E E+ P A+D L + P+ + V
Sbjct: 241 IGGEAVTNNS-GQMFHLLLSRPELAERLRSEP------EIRPRAIDELLRWIPHRNAVG- 292
Query: 407 EAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDP 466
++R ++VEI G R+ G V+++ +D + FP+PD+ E
Sbjct: 293 -----------LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE---- 337
Query: 467 NCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
R P ++ FG GP C G A E +L
Sbjct: 338 -------RSPNPHVSFGFGPHYCPGGMLARLESEL 365
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALS-SIVYLVAAHPEVEN 373
D L+++V+ R +E + D IS + E + G+ S A+ + + LVA + + N
Sbjct: 192 DYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQIAFLLLVAGNAAMVN 245
Query: 374 KLLAEIDGFGPRELVPTALDLQQKFPYLD-QVIKEAMRIYLVSPLVARETAKEVEIGGYR 432
+ + P L + P L Q ++E R + S L + TAKE + G +
Sbjct: 246 MIALGVATLAQH---PDQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDK 302
Query: 433 LPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIG 491
L + +A A +D + F PD+F R P P L FG G CI
Sbjct: 303 LVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP---------PQDPLGFGFGDHRCIA 353
Query: 492 QKFAMQEIKLSLIHLYRNYVFRHSPDME----------NPLELEFGII 529
+ A E+ LY+ + PD++ PL + GI+
Sbjct: 354 EHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKINYTPLNRDVGIV 396
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 187 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 239
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 240 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 280
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + + L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 281 RYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 338
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 339 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 386
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 387 YTPLNRDVGIV 397
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 99/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 186 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 238
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 239 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 279
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + + L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 280 RYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 337
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 338 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 385
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 386 YTPLNRDVGIV 396
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
L Q+ Y + ++E R Y P V +++ E G P+G V L L D+ +
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+P +F+PERF E++ P +G R C G+ + +K++ HL N +
Sbjct: 327 ADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVA-AHLLVNAMRY 384
Query: 514 HSPDMENPLELEF 526
PD + L ++F
Sbjct: 385 DVPDQD--LSIDF 395
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 393 DLQQKFP-YLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSK 451
DL Q+ P L I+E +R + R + E G L G + L +S
Sbjct: 254 DLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLF-----ESA 308
Query: 452 NFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYV 511
NF E +PE+FD QR+P ++L FG G C+G + A E+ L V
Sbjct: 309 NFDEAVFCEPEKFD------VQRNPNSHLAFGFGTHFCLGNQLARLELS-----LMTERV 357
Query: 512 FRHSPDM 518
R PD+
Sbjct: 358 LRRLPDL 364
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 38/207 (18%)
Query: 313 SKDLLSLIVKARELETESK-NVFTPDYISAVTYEHL--------LAGSATTSFALSSIVY 363
S+ LL++I + R+ E +Y T E L LAG S + V
Sbjct: 191 SRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVL 250
Query: 364 LVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETA 423
+ HPE +ID F E Q +D++I+ Y +P +ARE
Sbjct: 251 AMLRHPE-------QIDAFRGDE--------QSAQRAVDELIRYLTVPYSPTPRIARE-- 293
Query: 424 KEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFG 483
++ + G + KG V +L +D P+ D+ R P ++ FG
Sbjct: 294 -DLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLD-----------VTREPIPHVAFG 341
Query: 484 IGPRACIGQKFAMQEIKLSLIHLYRNY 510
G C+G A E++ L+R +
Sbjct: 342 HGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 35/197 (17%)
Query: 335 TPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDL 394
TP+ + L AG TT +++ VY +A P+ +L A+
Sbjct: 237 TPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD---------------- 280
Query: 395 QQKFPYLDQ-VIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
P L + +EA+R R T ++VE+ G + +G V + LG +D + +
Sbjct: 281 ----PSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRW 336
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+PD++ R ++ FG G C+GQ A E ++ L L R
Sbjct: 337 DDPDRYD-----------ITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVA-- 383
Query: 514 HSPDMENPLELEFGIIL 530
+ ++ PL+ F L
Sbjct: 384 -AIEIAGPLKRRFNNTL 399
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 40/225 (17%)
Query: 276 LKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFT 335
L R G+M VE+ Q L + KRM Q DL S I+ E +T
Sbjct: 170 LTRPDGSM--TVEQLKQAADDYLWPFIEKRMA---QPGDDLFSRILS----EPVGGRPWT 220
Query: 336 PDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALD-L 394
D + L G T + + + +A HPE + +LL E +L+P A D L
Sbjct: 221 VDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPE-DQRLLRERP-----DLIPAAADEL 274
Query: 395 QQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFP 454
+++P + V+R +V+ G + KG V+L + D +F
Sbjct: 275 MRRYPTV---------------AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFE 319
Query: 455 EPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEI 499
P++ RFD + P + G+G C+G A E+
Sbjct: 320 APEEV---RFD------RGLAPIRHTTMGVGAHRCVGAGLARMEV 355
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 186 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 238
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 239 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 279
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 280 RYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 337
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 338 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 385
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 386 YTPLNRDVGIV 396
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 98/251 (39%), Gaps = 51/251 (20%)
Query: 290 TNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLA 349
NQ+L L +V +R+ E K +I K + + N+ D + + + L+A
Sbjct: 187 ANQELLDYLAILVEQRLVEPKD------DIISKLCTEQVKPGNIDKSDAVQ-IAFLLLVA 239
Query: 350 GSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAM 409
G+AT ++ V +A HP+ +L A L P Q ++E
Sbjct: 240 GNATMVNMIALGVATLAQHPDQLAQLKAN------PSLAP-------------QFVEELC 280
Query: 410 RIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVA-KDSKNFPEPDKFKPERFDPNC 468
R + L + TAKE + G +L + +A A +D + F PD+F R P
Sbjct: 281 RYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-- 338
Query: 469 EEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME--------- 519
P L FG G CI + A E+ LY+ + PD++
Sbjct: 339 -------PQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF-----PDLKVAVPLGKIN 386
Query: 520 -NPLELEFGII 529
PL + GI+
Sbjct: 387 YTPLNRDVGIV 397
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
L Q+ Y + ++E R Y P V +++ E G P+G V L L D+ +
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+P +F+PERF E++ P +G R C G+ + +K++ HL N +
Sbjct: 319 ADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVA-AHLLVNAMRY 376
Query: 514 HSPDMENPLELEF 526
PD + L ++F
Sbjct: 377 DVPDQD--LSIDF 387
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
L Q+ Y + ++E R Y P V +++ E G P+G V L L D+ +
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+P +F+PERF E++ P +G R C G+ + +K++ HL N +
Sbjct: 327 ADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVA-AHLLVNAMRY 384
Query: 514 HSPDMENPLELEF 526
PD + L ++F
Sbjct: 385 DVPDQD--LSIDF 395
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
L Q+ Y + ++E R Y P V +++ E G P+G V L L D+ +
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+P +F+PERF E++ P +G R C G+ + +K++ HL N +
Sbjct: 319 ADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVA-AHLLVNAMRY 376
Query: 514 HSPDMENPLELEF 526
PD + L ++F
Sbjct: 377 DVPDQD--LSIDF 387
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
L Q+ Y + ++E R Y P V +++ E G P+G V L L D+ +
Sbjct: 259 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+P +F+PERF E++ P +G R C G+ + +K++ HL N +
Sbjct: 319 ADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVA-AHLLVNAMRY 376
Query: 514 HSPDMENPLELEF 526
PD + L ++F
Sbjct: 377 DVPDQD--LSIDF 387
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 394 LQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNF 453
L Q+ Y + ++E R Y P V +++ E G P+G V L L D+ +
Sbjct: 267 LVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 454 PEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNYVFR 513
+P +F+PERF E++ P +G R C G+ + +K++ HL N +
Sbjct: 327 ADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPGEWIVLAIMKVA-AHLLVNAMRY 384
Query: 514 HSPDMENPLELEF 526
PD + L ++F
Sbjct: 385 DVPDQD--LSIDF 395
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 35/198 (17%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENK 374
DL S +++A +E+ + T I + + AG TT + + V ++ HPE
Sbjct: 212 DLTSALIQA----SENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQR-- 265
Query: 375 LLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRL 433
AL L + + V++E +R S ++ R A++V +G +
Sbjct: 266 ----------------ALVLSGEAEW-SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVI 308
Query: 434 PKGTWVWLALGVVAKDSK-NFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQ 492
P G + ++ G + +D + + P D+F R N RH + FG GP C G
Sbjct: 309 PAGDALIVSYGALGRDERAHGPTADRFDLTRTSGN------RH----ISFGHGPHVCPGA 358
Query: 493 KFAMQEIKLSLIHLYRNY 510
+ E ++L LY +
Sbjct: 359 ALSRMEAGVALPALYARF 376
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 399 PYLDQVIKEAMRIYLVSPLVARETAKEVEI-----GGYRLPKGTWVWL-ALGVVAKDSKN 452
P LD V+ E++R+ +P + RE ++ + + L +G + L +D +
Sbjct: 317 PVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEI 375
Query: 453 FPEPDKFKPERF-DPNCEEAK------QRHPCAYLPFGIGPRACIGQKFAMQEIK----L 501
+ +P+ FK RF +P+ E K +R +P+G G C+G+ +A+ IK L
Sbjct: 376 YTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFL 435
Query: 502 SLIHL 506
L+HL
Sbjct: 436 VLVHL 440
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 399 PYLDQVIKEAMRIYLVSPLVARETAKEVEI-----GGYRLPKGTWVWL-ALGVVAKDSKN 452
P LD V+ E++R+ +P + RE ++ + + L +G + L +D +
Sbjct: 329 PVLDSVLSESLRL-TAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEI 387
Query: 453 FPEPDKFKPERF-DPNCEEAK------QRHPCAYLPFGIGPRACIGQKFAMQEIK----L 501
+ +P+ FK RF +P+ E K +R +P+G G C+G+ +A+ IK L
Sbjct: 388 YTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFL 447
Query: 502 SLIHL 506
L+HL
Sbjct: 448 VLVHL 452
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 44/235 (18%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENK 374
D+L+++++A E + + T + + A+ + AG+ TT + ++ V + PE
Sbjct: 224 DVLTMLLQA---EADGSRLSTKELV-ALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALEL 279
Query: 375 LLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLP 434
+ AE L+ ALD +F + +RI V R +++E G +
Sbjct: 280 VKAEPG------LMRNALDEVLRFDNI-------LRIGTV-----RFARQDLEYCGASIK 321
Query: 435 KGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKF 494
KG V+L + +D F PD F +R A L +G GP C G
Sbjct: 322 KGEMVFLLIPSALRDGTVFSRPDVFD-----------VRRDTSASLAYGRGPHVCPGVSL 370
Query: 495 AMQEIKLSLIHLYRNYVFRHSPDM---ENPLELEFGIILNFKHGVKLRVLSRTSR 546
A E ++++ +FR P+M E P+ FG F++ L V+ + S+
Sbjct: 371 ARLEAEIAV-----GTIFRRFPEMKLKETPV---FGYHPAFRNIESLNVILKPSK 417
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 44/235 (18%)
Query: 315 DLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENK 374
D+L+++++A E + + T + + A+ + AG+ TT + ++ V + PE
Sbjct: 224 DVLTMLLQA---EADGSRLSTKELV-ALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALEL 279
Query: 375 LLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLP 434
+ AE L+ ALD +F + +RI V R +++E G +
Sbjct: 280 VKAEPG------LMRNALDEVLRFENI-------LRIGTV-----RFARQDLEYCGASIK 321
Query: 435 KGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKF 494
KG V+L + +D F PD F +R A L +G GP C G
Sbjct: 322 KGEMVFLLIPSALRDGTVFSRPDVFD-----------VRRDTSASLAYGRGPHVCPGVSL 370
Query: 495 AMQEIKLSLIHLYRNYVFRHSPDM---ENPLELEFGIILNFKHGVKLRVLSRTSR 546
A E ++++ +FR P+M E P+ FG F++ L V+ + S+
Sbjct: 371 ARLEAEIAV-----GTIFRRFPEMKLKETPV---FGYHPAFRNIESLNVILKPSK 417
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 37/188 (19%)
Query: 312 GSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEV 371
G +DLL+L++ A + S+N + VT+ + G T + + + V + AHP+
Sbjct: 201 GGEDLLALMLDAHDRGLMSRNEIVS---TVVTF--IFTGHETVASQVGNAVLSLLAHPD- 254
Query: 372 ENKLLAEIDGFGPRELVPTALDLQQKFP-YLDQVIKEAMRIYLVSPLVARETAKEVEIGG 430
LDL ++ P L Q ++E +R R+ +VE+ G
Sbjct: 255 -------------------QLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRG 295
Query: 431 YRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACI 490
RL + V + G +D + + PD F ER P + FG G R C+
Sbjct: 296 RRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER-----------DPVPSMSFGAGMRYCL 344
Query: 491 GQKFAMQE 498
G A +
Sbjct: 345 GSYLARTQ 352
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 45/232 (19%)
Query: 273 RQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKAREL-ETESK 331
RQI+ G ER + L G + E V R +L V E+ ETE+
Sbjct: 179 RQIISTSGGAE--AAERAKRGLYGWITETVRARAGSEGGDVYSMLGAAVGRGEVGETEAV 236
Query: 332 NVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTA 391
+ P L G + + ++YL+ E+ ++ G TA
Sbjct: 237 GLAGP----------LQIGGEAVTHNVGQMLYLLLTRRELMARMRERPGARG------TA 280
Query: 392 LDLQQKFPYLDQVIKEAMRI--YLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKD 449
LD E +R + S +AR ++VE+ G R+ G V+++ +D
Sbjct: 281 LD-------------ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRD 327
Query: 450 SKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
FP+PD+ +R DPN +L +G G C G A + +L
Sbjct: 328 PDVFPDPDRIDLDR-DPN----------PHLAYGNGHHFCTGAVLARMQTEL 368
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 403 QVIKEAMRIYLVSPLVARE---TAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKF 459
+ ++EA+R SP V R T ++V+I + +G V + + +D + F +PD F
Sbjct: 242 KAVEEALRF---SPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSF 298
Query: 460 KPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
P+ R P +L FG G C+G A E +++L + +
Sbjct: 299 IPD-----------RTPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 45/232 (19%)
Query: 273 RQILKRIPGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKAREL-ETESK 331
RQI+ G ER + L G + E V R +L V E+ ETE+
Sbjct: 179 RQIISTSGGAE--AAERAKRGLYGWITETVRARAGSEGGDVYSMLGAAVGRGEVGETEAV 236
Query: 332 NVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTA 391
+ P L G + + ++YL+ E+ ++ G TA
Sbjct: 237 GLAGP----------LQIGGEAVTHNVGQMLYLLLTRRELMARMRERPGARG------TA 280
Query: 392 LDLQQKFPYLDQVIKEAMRI--YLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKD 449
LD E +R + S +AR ++VE+ G R+ G V+++ +D
Sbjct: 281 LD-------------ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRD 327
Query: 450 SKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKL 501
FP+PD+ +R DPN +L +G G C G A + +L
Sbjct: 328 PDVFPDPDRIDLDR-DPN----------PHLAYGNGHHFCTGAVLARMQTEL 368
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 38/224 (16%)
Query: 280 PGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYI 339
P M +E N +D I+ R+ DL++L+V + E+ E D
Sbjct: 228 PEEMATDLEAGNNGFYAYVDPIIRARVGGD---GDDLITLMVNS-EINGER---IAHDKA 280
Query: 340 SAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP 399
+ LL G T LS + +A HPE+ +L ++ P +L+ A ++ ++FP
Sbjct: 281 QGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSD-----PLKLMRGAEEMFRRFP 335
Query: 400 YLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKF 459
+ + AR AK+ E G L +G + L + D PEP K
Sbjct: 336 VVSE---------------ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKL 380
Query: 460 KPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
R ++ FG GP C G A E+ ++L
Sbjct: 381 D-----------FSRRSISHSTFGGGPHRCAGMHLARMEVIVTL 413
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 38/224 (16%)
Query: 280 PGTMDWKVERTNQKLSGRLDEIVFKRMKESKQGSKDLLSLIVKARELETESKNVFTPDYI 339
P M +E N +D I+ R+ DL++L+V + E+ E D
Sbjct: 193 PEEMATDLEAGNNGFYAYVDPIIRARVGGD---GDDLITLMVNS-EINGER---IAHDKA 245
Query: 340 SAVTYEHLLAGSATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFP 399
+ LL G T LS + +A HPE+ +L ++ P +L+ A ++ ++FP
Sbjct: 246 QGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSD-----PLKLMRGAEEMFRRFP 300
Query: 400 YLDQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKF 459
+ + AR AK+ E G L +G + L + D PEP K
Sbjct: 301 VVSE---------------ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKL 345
Query: 460 KPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
R ++ FG GP C G A E+ ++L
Sbjct: 346 D-----------FSRRSISHSTFGGGPHRCAGMHLARMEVIVTL 378
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 366 AAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA------ 419
A H +V N+L EI + +K V+ E +R P+ A
Sbjct: 313 AGH-QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLR--FEPPVTAQYGRAK 369
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRH---- 475
++ E +++ G ++ + +D K F D+F PERF E RH
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWS 429
Query: 476 --PCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
P P +G + C G+ F + +L +I ++R Y
Sbjct: 430 NGPETETP-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 16/157 (10%)
Query: 366 AAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVA------ 419
A H +V N+L EI + +K V+ E +R P+ A
Sbjct: 313 AGH-QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLR--FEPPVTAQYGRAK 369
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRH---- 475
++ E +++ G ++ + +D K F D+F PERF E RH
Sbjct: 370 KDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWS 429
Query: 476 --PCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYRNY 510
P P +G + C G+ F + +L +I ++R Y
Sbjct: 430 NGPETETP-TVGNKQCAGKDFVVLVARLFVIEIFRRY 465
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 21/156 (13%)
Query: 368 HPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYL-VSPLVARETAK-- 424
H ++ ++ I +G + L+ ++ P V+ E++RI V P + +
Sbjct: 300 HTQLAEEIRGAIKSYGDGNVT---LEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFT 356
Query: 425 -EVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFG 483
E + + KG ++ KD K F P+++ P+RF + E Y+ +
Sbjct: 357 IESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEAL-----LKYVWWS 411
Query: 484 IGP---------RACIGQKFAMQEIKLSLIHLYRNY 510
GP + C G+ F + +L +I L+R Y
Sbjct: 412 NGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY 447
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 402 DQVIKEAMRIYLVSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKP 461
+ ++E R Y P + K+ KGT V L L D + + PD+F+P
Sbjct: 277 EMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRP 336
Query: 462 ERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSL 503
ERF E P G R C G+ ++ +K SL
Sbjct: 337 ERFAEREENLFDMIPQGGGHAEKGHR-CPGEGITIEVMKASL 377
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 259 LHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 318
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L FG G C+G + ++ + L +
Sbjct: 319 FPNPGSIELDR--PN--------PTSHLAFGRGQHFCLGSALGRRHAQIGIEALLK 364
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 376 LAEIDGFGPRELV--PTALDLQQKFP-YLDQVIKEAMRIYLVSPLVA---RETAKEVEIG 429
+A + GFG L+ P ++L + P ++V+ E +R YL SP+ A R K+V I
Sbjct: 250 VAGMIGFGVLALLDNPGQIELLFESPEKAERVVNELVR-YL-SPVQAPNPRLAIKDVVID 307
Query: 430 GYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRAC 489
G + G +V ++ + +D P+PD D N R + + FG G C
Sbjct: 308 GQLIKAGDYVLCSILMANRDEALTPDPDV-----LDAN------RAAVSDVGFGHGIHYC 356
Query: 490 IGQKFAMQEIKLSLIHLYRNY 510
+G A ++++ L+R +
Sbjct: 357 VGAALARSMLRMAYQTLWRRF 377
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 20/119 (16%)
Query: 420 RETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAY 479
R ++VE+GG ++ KG V ++ D + F +P F R P +
Sbjct: 301 RTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFN-----------ILRSPNPH 349
Query: 480 LPF-GIGPRACIGQKFAMQEIKLSLIHLYRNYVFRHSPDME---NPLELEFGIILNFKH 534
+ F G G CIG A I L N + + PD++ P L+ G + KH
Sbjct: 350 VGFGGTGAHYCIGANLARMTINLIF-----NAIADNMPDLKPIGAPERLKSGWLNGIKH 403
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 31/158 (19%)
Query: 352 ATTSFALSSIVYLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRI 411
AT SF ++++ L+ P++ N LL E EL+P ++E +RI
Sbjct: 237 ATGSFLTTALISLIQ-RPQLRN-LLHE-----KPELIPAG-------------VEELLRI 276
Query: 412 YL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEE 470
L + + R ++++G + KG V + L D ++FP P + +R PN
Sbjct: 277 NLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--PN--- 331
Query: 471 AKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
P ++L FG G C G + ++ + L +
Sbjct: 332 -----PTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYLV-SPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 259 LHEKPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 318
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L FG G C G + ++ + L +
Sbjct: 319 FPNPGSIELDR--PN--------PTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 258 LHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 317
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L FG G C G + ++ + L +
Sbjct: 318 FPNPGSIELDR--PN--------PTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 363
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 259 LHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 318
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L FG G C G + ++ + L +
Sbjct: 319 FPNPGSIELDR--PN--------PTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 259 LHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 318
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L FG G C G + ++ + L +
Sbjct: 319 FPNPGSIELDR--PN--------PTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 259 LHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 318
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L FG G C G + ++ + L +
Sbjct: 319 FPNPGSIELDR--PN--------PTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 78/194 (40%), Gaps = 36/194 (18%)
Query: 309 SKQGSKDLLSLIVKARELETESKNVFTPDYISAVTYEHLLAGSATTSFALSSIVYLVAAH 368
+K DL+S++ + ++N+ +Y+ V ++ G+ TT +++ V + +
Sbjct: 230 NKDPGNDLISMLAHS----PATRNMTPEEYLGNVLL-LIVGGNDTTRNSMTGGVLALHKN 284
Query: 369 PEVENKLLAEIDGFGPRELVPTALDLQQKFPYL-DQVIKEAMRIYLVSPLVARETAKEVE 427
P+ KL A P L + ++ E +R + R + E
Sbjct: 285 PDQFAKLKAN--------------------PALVETMVPEIIRWQTPLAHMRRTAIADSE 324
Query: 428 IGGYRLPKGTWVWLALGVVAKDSKNFPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPR 487
+GG + KG V + +D + P++F +R P +L FG G
Sbjct: 325 LGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR----------PRPRQHLSFGFGIH 374
Query: 488 ACIGQKFAMQEIKL 501
C+G + A ++++
Sbjct: 375 RCVGNRLAEMQLRI 388
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 394 LQQKFPYLDQVIKEAMRIYL-VSPLVARETAKEVEIGGYRLPKGTWVWLALGVVAKDSKN 452
L +K + ++E +RI L + + R ++++G + KG V + L D ++
Sbjct: 259 LHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEH 318
Query: 453 FPEPDKFKPERFDPNCEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIKLSLIHLYR 508
FP P + +R PN P ++L G G C G + ++ + L +
Sbjct: 319 FPNPGSIELDR--PN--------PTSHLAHGRGQHFCPGSALGRRHAQIGIEALLK 364
>pdb|1MV8|A Chain A, 1.55 A Crystal Structure Of A Ternary Complex Of
Gdp-Mannose Dehydrogenase From Psuedomonas Aeruginosa
pdb|1MV8|B Chain B, 1.55 A Crystal Structure Of A Ternary Complex Of
Gdp-Mannose Dehydrogenase From Psuedomonas Aeruginosa
pdb|1MV8|C Chain C, 1.55 A Crystal Structure Of A Ternary Complex Of
Gdp-Mannose Dehydrogenase From Psuedomonas Aeruginosa
pdb|1MV8|D Chain D, 1.55 A Crystal Structure Of A Ternary Complex Of
Gdp-Mannose Dehydrogenase From Psuedomonas Aeruginosa
Length = 436
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 188 TFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIAD 227
T +N+ + L D G+ A GV+FG+ + PE + +S I D
Sbjct: 129 TVNNVVIPLIEDCSGKKA-GVDFGVGTNPEFLRESTAIKD 167
>pdb|1MFZ|A Chain A, Partially Refined 2.8 A Crystal Structure Of Gdp-Mannose
Dehydrogenase From P. Aeruginosa
pdb|1MFZ|B Chain B, Partially Refined 2.8 A Crystal Structure Of Gdp-Mannose
Dehydrogenase From P. Aeruginosa
pdb|1MFZ|C Chain C, Partially Refined 2.8 A Crystal Structure Of Gdp-Mannose
Dehydrogenase From P. Aeruginosa
pdb|1MFZ|D Chain D, Partially Refined 2.8 A Crystal Structure Of Gdp-Mannose
Dehydrogenase From P. Aeruginosa
pdb|1MUU|A Chain A, 2.0 A Crystal Structure Of Gdp-Mannose Dehydrogenase
pdb|1MUU|B Chain B, 2.0 A Crystal Structure Of Gdp-Mannose Dehydrogenase
pdb|1MUU|C Chain C, 2.0 A Crystal Structure Of Gdp-Mannose Dehydrogenase
pdb|1MUU|D Chain D, 2.0 A Crystal Structure Of Gdp-Mannose Dehydrogenase
Length = 436
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 188 TFSNLALTLATDTIGQAAFGVNFGLSSKPESITDSIGIAD 227
T +N+ + L D G+ A GV+FG+ + PE + +S I D
Sbjct: 129 TVNNVVIPLIEDCSGKKA-GVDFGVGTNPEFLRESTAIKD 167
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 363 YLVAAHPEVENKLLAEIDGFGPRELVPTALDLQQKFPYLDQVIKEAMRIYLVSPLVARET 422
YL+ HPE + EI G L + Q+ P D V+ E +R+ + L+ R+
Sbjct: 279 YLLT-HPEALRAVREEIQGGKHLRLE----ERQKNTPVFDSVLWETLRL-TAAALITRDV 332
Query: 423 AKEVEIG-----GYRLPKGTWVWLALGVVAK-DSKNFPEPDKFKPERF---------DPN 467
++ +I Y L +G + + + + D + +P+ F+ +RF D
Sbjct: 333 TQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFF 392
Query: 468 CEEAKQRHPCAYLPFGIGPRACIGQKFAMQEIK 500
A+ ++P +P+G C G+ FA+ IK
Sbjct: 393 KNGARVKYPS--VPWGTEDNLCPGRHFAVHAIK 423
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,219,961
Number of Sequences: 62578
Number of extensions: 609251
Number of successful extensions: 1960
Number of sequences better than 100.0: 224
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 274
length of query: 547
length of database: 14,973,337
effective HSP length: 104
effective length of query: 443
effective length of database: 8,465,225
effective search space: 3750094675
effective search space used: 3750094675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)