Query 008996
Match_columns 547
No_of_seqs 243 out of 1998
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 16:26:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008996.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008996hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 8E-94 2.7E-98 768.1 0.9 414 119-547 3-426 (428)
2 3mae_A 2-oxoisovalerate dehydr 100.0 8.8E-62 3E-66 487.3 20.3 228 316-546 17-244 (256)
3 1scz_A E2, dihydrolipoamide su 100.0 1.1E-61 3.9E-66 481.1 18.6 227 318-547 5-231 (233)
4 1dpb_A Dihydrolipoyl-transacet 100.0 2.2E-60 7.6E-65 474.6 22.1 227 317-547 15-243 (243)
5 3l60_A Branched-chain alpha-ke 100.0 8.7E-61 3E-65 478.6 18.8 219 320-546 17-239 (250)
6 3b8k_A PDCE2;, dihydrolipoylly 100.0 3.7E-60 1.3E-64 472.1 15.4 230 315-547 10-239 (239)
7 2ii3_A Lipoamide acyltransfera 100.0 1.8E-59 6.2E-64 472.4 20.4 228 316-547 30-259 (262)
8 3rqc_A Probable lipoamide acyl 100.0 5.8E-59 2E-63 459.1 21.3 215 317-547 6-222 (224)
9 2xt6_A 2-oxoglutarate decarbox 100.0 2.8E-47 9.6E-52 446.5 16.7 211 332-544 1-224 (1113)
10 1q23_A Chloramphenicol acetylt 100.0 6.4E-42 2.2E-46 336.5 22.7 193 326-543 18-216 (219)
11 3cla_A Type III chloramphenico 100.0 4.4E-41 1.5E-45 329.2 21.2 182 338-541 23-210 (213)
12 2i9d_A Chloramphenicol acetylt 100.0 5.5E-39 1.9E-43 315.1 19.7 180 338-539 25-216 (217)
13 1zy8_K Pyruvate dehydrogenase 100.0 2.3E-31 7.8E-36 262.6 4.0 166 118-295 3-169 (229)
14 1y8o_B Dihydrolipoyllysine-res 99.8 7.9E-20 2.7E-24 164.8 12.9 100 104-203 13-112 (128)
15 2dne_A Dihydrolipoyllysine-res 99.8 2.5E-19 8.6E-24 157.1 10.4 92 113-204 2-93 (108)
16 3crk_C Dihydrolipoyllysine-res 99.8 5.4E-18 1.8E-22 142.6 12.2 83 115-197 2-84 (87)
17 2dnc_A Pyruvate dehydrogenase 99.7 7.7E-18 2.6E-22 145.1 12.1 82 116-198 5-87 (98)
18 1k8m_A E2 component of branche 99.7 2.7E-17 9.2E-22 140.3 10.5 78 117-195 3-80 (93)
19 1ghj_A E2, E2, the dihydrolipo 99.7 1.5E-16 5.1E-21 131.0 9.3 75 119-194 2-76 (79)
20 1pmr_A Dihydrolipoyl succinylt 99.6 4.2E-17 1.4E-21 134.8 -0.4 75 119-194 3-77 (80)
21 2l5t_A Lipoamide acyltransfera 99.6 1.6E-15 5.4E-20 124.1 8.4 75 119-194 2-76 (77)
22 1qjo_A Dihydrolipoamide acetyl 99.6 2.2E-15 7.5E-20 124.1 9.0 74 119-195 3-76 (80)
23 1iyu_A E2P, dihydrolipoamide a 99.6 1E-14 3.6E-19 119.9 10.5 73 119-195 2-74 (79)
24 1gjx_A Pyruvate dehydrogenase; 99.5 3.9E-15 1.4E-19 122.9 5.3 76 118-195 2-77 (81)
25 2k7v_A Dihydrolipoyllysine-res 99.4 1.1E-13 3.7E-18 115.6 1.6 71 119-196 3-73 (85)
26 2kcc_A Acetyl-COA carboxylase 99.3 4.2E-12 1.4E-16 105.9 7.4 64 131-196 12-75 (84)
27 1z6h_A Biotin/lipoyl attachmen 99.3 1.2E-11 4E-16 99.3 9.4 64 131-195 6-69 (72)
28 2jku_A Propionyl-COA carboxyla 99.3 1.9E-12 6.4E-17 110.3 3.3 78 115-193 12-93 (94)
29 2eq9_C Pyruvate dehydrogenase 99.2 4.3E-12 1.5E-16 91.7 3.2 40 255-294 1-40 (41)
30 3rnm_E Lipoamide acyltransfera 99.2 3.7E-12 1.3E-16 98.9 2.8 43 253-295 6-48 (58)
31 2dn8_A Acetyl-COA carboxylase 99.2 3.7E-11 1.3E-15 103.3 9.0 63 131-195 24-86 (100)
32 2d5d_A Methylmalonyl-COA decar 99.2 1.4E-10 4.9E-15 93.1 9.6 62 131-193 12-73 (74)
33 2eq8_C Pyruvate dehydrogenase 99.1 1.5E-11 5.2E-16 88.4 3.1 37 257-293 2-38 (40)
34 1bdo_A Acetyl-COA carboxylase; 99.1 8E-11 2.7E-15 96.7 7.3 56 137-193 24-79 (80)
35 2eq7_C 2-oxoglutarate dehydrog 99.1 1.1E-11 3.7E-16 89.1 1.7 37 257-293 2-38 (40)
36 1dcz_A Transcarboxylase 1.3S s 99.1 1.9E-10 6.4E-15 93.5 8.8 62 131-193 15-76 (77)
37 1bal_A Dihydrolipoamide succin 99.1 1.7E-11 5.8E-16 92.9 2.2 41 254-294 9-49 (51)
38 1w85_I Dihydrolipoyllysine-res 99.1 2.4E-11 8E-16 91.3 2.8 41 254-294 6-46 (49)
39 2ejm_A Methylcrotonoyl-COA car 99.1 2.2E-10 7.6E-15 98.3 8.9 66 131-197 21-86 (99)
40 1w4i_A Pyruvate dehydrogenase 99.0 1.3E-10 4.6E-15 91.5 3.7 43 254-296 4-46 (62)
41 2f60_K Pyruvate dehydrogenase 99.0 7.5E-11 2.6E-15 93.5 2.1 43 253-295 8-50 (64)
42 3n6r_A Propionyl-COA carboxyla 99.0 4.8E-10 1.6E-14 126.6 9.3 62 131-193 619-680 (681)
43 2coo_A Lipoamide acyltransfera 99.0 3.3E-10 1.1E-14 91.4 5.3 44 253-296 14-57 (70)
44 3va7_A KLLA0E08119P; carboxyla 99.0 5.1E-10 1.7E-14 133.3 9.3 61 132-193 1175-1235(1236)
45 3hbl_A Pyruvate carboxylase; T 98.9 1.4E-09 4.8E-14 129.0 9.0 63 131-194 1084-1146(1150)
46 3u9t_A MCC alpha, methylcroton 98.9 1.3E-10 4.6E-15 131.0 0.0 63 131-194 609-671 (675)
47 2k32_A A; NMR {Campylobacter j 98.7 2.5E-08 8.4E-13 87.4 6.1 67 131-198 8-104 (116)
48 3bg3_A Pyruvate carboxylase, m 98.6 1E-08 3.5E-13 115.8 3.6 61 132-193 657-717 (718)
49 2qf7_A Pyruvate carboxylase pr 98.6 2.8E-08 9.6E-13 118.1 5.5 62 131-193 1102-1163(1165)
50 1zko_A Glycine cleavage system 98.6 9.5E-08 3.2E-12 86.7 7.0 68 120-194 38-113 (136)
51 1hpc_A H protein of the glycin 98.1 1.6E-06 5.4E-11 78.2 4.2 55 120-180 29-84 (131)
52 3a7l_A H-protein, glycine clea 98.1 3.4E-06 1.2E-10 75.7 6.3 56 120-180 30-85 (128)
53 1onl_A Glycine cleavage system 98.1 4.8E-06 1.6E-10 74.7 6.1 69 120-194 29-104 (128)
54 3ne5_B Cation efflux system pr 97.6 8.6E-05 2.9E-09 78.7 7.6 66 131-197 128-242 (413)
55 3lnn_A Membrane fusion protein 97.6 8E-05 2.7E-09 76.8 7.1 65 132-197 65-206 (359)
56 2f1m_A Acriflavine resistance 97.5 2.7E-05 9.3E-10 77.5 2.6 66 131-197 29-167 (277)
57 3klr_A Glycine cleavage system 97.5 0.00016 5.6E-09 64.4 6.7 46 133-178 32-78 (125)
58 3fpp_A Macrolide-specific effl 97.5 9.3E-05 3.2E-09 75.7 5.6 66 131-197 38-191 (341)
59 3mxu_A Glycine cleavage system 97.3 0.00031 1.1E-08 63.9 6.7 46 133-178 54-100 (143)
60 3tzu_A GCVH, glycine cleavage 97.3 0.00033 1.1E-08 63.3 6.3 44 133-176 49-93 (137)
61 1vf7_A Multidrug resistance pr 97.2 0.00014 4.9E-09 75.6 2.7 66 131-197 50-174 (369)
62 3hgb_A Glycine cleavage system 97.0 0.0011 3.9E-08 60.9 6.7 44 133-176 59-103 (155)
63 4dk0_A Putative MACA; alpha-ha 96.5 0.00016 5.4E-09 74.7 -3.3 63 131-194 39-189 (369)
64 3na6_A Succinylglutamate desuc 96.3 0.0089 3E-07 61.6 8.6 59 135-196 267-329 (331)
65 3fmc_A Putative succinylglutam 96.0 0.015 5.2E-07 60.7 8.9 58 135-195 300-363 (368)
66 3cdx_A Succinylglutamatedesucc 96.0 0.015 5.3E-07 60.2 8.5 60 135-197 277-340 (354)
67 2dn8_A Acetyl-COA carboxylase 95.4 0.0064 2.2E-07 51.5 2.3 46 149-195 5-50 (100)
68 2qj8_A MLR6093 protein; struct 94.0 0.13 4.3E-06 52.7 8.5 59 134-195 266-328 (332)
69 1z6h_A Biotin/lipoyl attachmen 94.0 0.058 2E-06 42.1 4.6 32 163-195 1-32 (72)
70 1dcz_A Transcarboxylase 1.3S s 94.0 0.063 2.2E-06 42.5 4.8 33 162-195 9-41 (77)
71 2d5d_A Methylmalonyl-COA decar 93.7 0.088 3E-06 41.1 5.2 33 162-195 6-38 (74)
72 2k32_A A; NMR {Campylobacter j 93.1 0.098 3.3E-06 44.9 4.9 33 162-195 2-34 (116)
73 2kcc_A Acetyl-COA carboxylase 92.5 0.092 3.2E-06 42.8 3.7 33 162-195 6-38 (84)
74 1f3z_A EIIA-GLC, glucose-speci 91.0 0.22 7.4E-06 46.1 4.8 58 131-193 19-115 (161)
75 2f1m_A Acriflavine resistance 90.6 0.24 8.2E-06 48.7 5.1 52 141-194 3-54 (277)
76 1bdo_A Acetyl-COA carboxylase; 89.7 0.32 1.1E-05 38.8 4.2 33 162-195 5-44 (80)
77 2l5t_A Lipoamide acyltransfera 89.7 0.28 9.5E-06 38.9 3.8 27 131-157 51-77 (77)
78 2xha_A NUSG, transcription ant 89.5 0.27 9.2E-06 46.7 4.2 31 137-173 22-52 (193)
79 2gpr_A Glucose-permease IIA co 89.4 0.25 8.6E-06 45.3 3.8 58 131-193 14-110 (154)
80 2ejm_A Methylcrotonoyl-COA car 89.0 0.31 1.1E-05 40.9 3.9 34 161-195 14-47 (99)
81 2jku_A Propionyl-COA carboxyla 88.8 0.2 6.7E-06 41.7 2.5 34 161-195 25-58 (94)
82 3lnn_A Membrane fusion protein 88.7 0.33 1.1E-05 49.5 4.5 55 140-195 35-90 (359)
83 1ax3_A Iiaglc, glucose permeas 88.6 0.29 9.8E-06 45.3 3.6 58 131-193 19-115 (162)
84 3fpp_A Macrolide-specific effl 87.5 0.55 1.9E-05 47.4 5.3 53 140-194 11-63 (341)
85 1ghj_A E2, E2, the dihydrolipo 86.6 0.45 1.6E-05 37.8 3.3 26 132-157 52-77 (79)
86 3d4r_A Domain of unknown funct 86.5 0.93 3.2E-05 41.8 5.6 46 131-176 107-153 (169)
87 3crk_C Dihydrolipoyllysine-res 85.4 0.49 1.7E-05 38.5 3.0 29 131-159 55-84 (87)
88 1qjo_A Dihydrolipoamide acetyl 85.4 0.45 1.5E-05 37.8 2.6 34 119-158 44-77 (80)
89 1k8m_A E2 component of branche 85.2 0.75 2.6E-05 38.1 4.0 28 131-158 54-81 (93)
90 1iyu_A E2P, dihydrolipoamide a 84.4 0.66 2.3E-05 36.8 3.2 27 132-158 49-75 (79)
91 2xhc_A Transcription antitermi 83.7 0.86 3E-05 47.2 4.6 31 137-173 62-92 (352)
92 3ne5_B Cation efflux system pr 83.4 0.93 3.2E-05 47.5 4.8 54 140-194 99-154 (413)
93 1vf7_A Multidrug resistance pr 82.8 0.84 2.9E-05 47.0 4.1 52 141-194 24-75 (369)
94 1gjx_A Pyruvate dehydrogenase; 81.7 0.92 3.1E-05 36.1 3.1 29 166-195 12-40 (81)
95 2auk_A DNA-directed RNA polyme 80.7 1.7 5.9E-05 41.0 5.1 42 137-180 63-104 (190)
96 2dnc_A Pyruvate dehydrogenase 80.7 1.7 5.8E-05 36.4 4.5 28 168-196 20-47 (98)
97 2k7v_A Dihydrolipoyllysine-res 79.9 0.76 2.6E-05 37.2 2.0 35 118-158 39-73 (85)
98 2dne_A Dihydrolipoyllysine-res 79.5 1.2 4.2E-05 38.0 3.3 27 168-195 20-46 (108)
99 1y8o_B Dihydrolipoyllysine-res 79.3 1.3 4.4E-05 39.3 3.4 28 131-158 77-105 (128)
100 3fot_A 15-O-acetyltransferase; 74.9 96 0.0033 33.4 17.6 33 508-540 483-515 (519)
101 3n6r_A Propionyl-COA carboxyla 74.6 2.7 9.3E-05 47.1 5.2 35 161-196 612-646 (681)
102 2xha_A NUSG, transcription ant 74.5 1.1 3.6E-05 42.6 1.6 45 140-191 85-157 (193)
103 4dk0_A Putative MACA; alpha-ha 73.9 0.79 2.7E-05 46.7 0.6 53 141-195 13-65 (369)
104 2bco_A Succinylglutamate desuc 72.0 3.7 0.00013 42.2 5.1 52 138-197 279-330 (350)
105 1pmr_A Dihydrolipoyl succinylt 70.9 0.59 2E-05 37.4 -1.0 27 131-157 52-78 (80)
106 2gpr_A Glucose-permease IIA co 67.8 3.4 0.00012 37.7 3.3 37 120-157 74-112 (154)
107 3hbl_A Pyruvate carboxylase; T 66.4 5 0.00017 47.7 5.3 35 162-197 1078-1112(1150)
108 3va7_A KLLA0E08119P; carboxyla 66.3 4.9 0.00017 48.2 5.2 36 161-197 1167-1202(1236)
109 3our_B EIIA, phosphotransferas 66.1 9.8 0.00034 35.6 6.1 17 176-193 121-137 (183)
110 3bg3_A Pyruvate carboxylase, m 61.8 4.6 0.00016 45.6 3.6 34 162-196 650-683 (718)
111 3lu0_D DNA-directed RNA polyme 61.5 5.9 0.0002 47.4 4.5 35 137-173 1002-1036(1407)
112 3our_B EIIA, phosphotransferas 60.0 4.6 0.00016 37.9 2.7 27 132-158 114-140 (183)
113 3dva_I Dihydrolipoyllysine-res 57.3 2.2 7.5E-05 45.2 0.0 30 131-160 52-81 (428)
114 2qf7_A Pyruvate carboxylase pr 56.5 7.6 0.00026 46.3 4.4 33 162-195 1096-1128(1165)
115 1brw_A PYNP, protein (pyrimidi 55.6 15 0.0005 39.0 6.0 43 155-198 329-402 (433)
116 3u9t_A MCC alpha, methylcroton 54.9 2.5 8.7E-05 47.3 0.0 33 162-195 603-635 (675)
117 3h5q_A PYNP, pyrimidine-nucleo 53.8 16 0.00054 38.8 5.9 39 156-195 333-402 (436)
118 2dsj_A Pyrimidine-nucleoside ( 53.1 15 0.0005 38.9 5.4 42 155-198 322-394 (423)
119 1qpo_A Quinolinate acid phosph 52.8 9 0.00031 38.3 3.6 23 135-157 72-94 (284)
120 2b7n_A Probable nicotinate-nuc 50.6 10 0.00035 37.5 3.6 22 136-157 60-81 (273)
121 1x1o_A Nicotinate-nucleotide p 50.1 8.7 0.0003 38.4 3.0 22 136-157 74-95 (286)
122 3tqv_A Nicotinate-nucleotide p 49.9 8.9 0.0003 38.5 3.0 22 136-157 77-98 (287)
123 3l0g_A Nicotinate-nucleotide p 49.0 9.7 0.00033 38.4 3.1 22 135-156 85-106 (300)
124 3gnn_A Nicotinate-nucleotide p 48.1 9.8 0.00034 38.4 3.0 22 136-157 88-109 (298)
125 1o4u_A Type II quinolic acid p 47.5 8.1 0.00028 38.7 2.3 22 136-157 73-94 (285)
126 3paj_A Nicotinate-nucleotide p 47.0 10 0.00035 38.6 3.0 23 135-157 109-131 (320)
127 1f3z_A EIIA-GLC, glucose-speci 46.6 10 0.00035 34.7 2.7 26 132-157 92-117 (161)
128 1qap_A Quinolinic acid phospho 46.2 11 0.00037 37.9 3.0 23 135-157 86-108 (296)
129 1zy8_K Pyruvate dehydrogenase 45.6 4.4 0.00015 39.3 0.0 28 167-195 15-42 (229)
130 2tpt_A Thymidine phosphorylase 44.5 15 0.0005 39.1 3.9 43 155-198 334-407 (440)
131 3fmc_A Putative succinylglutam 42.7 18 0.00062 37.3 4.2 34 160-195 289-322 (368)
132 2xhc_A Transcription antitermi 42.0 13 0.00044 38.4 2.8 14 140-153 125-138 (352)
133 2jbm_A Nicotinate-nucleotide p 41.3 12 0.00041 37.6 2.5 21 136-156 73-93 (299)
134 1ax3_A Iiaglc, glucose permeas 41.0 9.8 0.00034 34.9 1.6 28 131-158 91-118 (162)
135 1uou_A Thymidine phosphorylase 39.8 38 0.0013 36.3 6.1 43 155-198 366-437 (474)
136 3na6_A Succinylglutamate desuc 39.6 23 0.00079 35.9 4.3 36 159-196 255-290 (331)
137 3h5q_A PYNP, pyrimidine-nucleo 37.4 18 0.0006 38.4 3.1 31 129-159 374-404 (436)
138 3it5_A Protease LASA; metallop 36.9 13 0.00045 34.6 1.8 21 136-156 83-103 (182)
139 1brw_A PYNP, protein (pyrimidi 33.9 27 0.00091 37.0 3.8 31 129-159 371-401 (433)
140 2dsj_A Pyrimidine-nucleoside ( 33.5 27 0.00092 36.9 3.7 31 129-159 363-393 (423)
141 1uou_A Thymidine phosphorylase 32.2 29 0.00099 37.2 3.7 30 130-159 407-436 (474)
142 2e1v_A Acyl transferase; BAHD 31.3 36 0.0012 35.5 4.3 29 512-540 162-190 (454)
143 3d4r_A Domain of unknown funct 30.7 46 0.0016 30.6 4.3 45 145-201 95-139 (169)
144 2rkv_A Trichothecene 3-O-acety 30.6 36 0.0012 35.3 4.2 30 512-541 148-177 (451)
145 4g22_A Hydroxycinnamoyl-COA sh 30.4 38 0.0013 35.2 4.3 30 512-541 150-179 (439)
146 2bgh_A Vinorine synthase; VS, 29.5 39 0.0013 34.9 4.2 30 512-541 152-181 (421)
147 2xr7_A Malonyltransferase; xen 29.1 37 0.0013 35.3 4.0 29 512-540 157-185 (453)
148 3c2e_A Nicotinate-nucleotide p 28.0 22 0.00077 35.5 1.9 21 136-156 69-95 (294)
149 3tuf_B Stage II sporulation pr 27.8 25 0.00084 34.4 2.1 26 133-158 130-155 (245)
150 3vr4_A V-type sodium ATPase ca 27.7 60 0.0021 35.7 5.3 53 139-195 130-185 (600)
151 3cdx_A Succinylglutamatedesucc 27.3 54 0.0018 33.3 4.7 39 156-196 262-300 (354)
152 2hsi_A Putative peptidase M23; 27.0 27 0.00091 34.8 2.2 21 175-196 232-252 (282)
153 1zko_A Glycine cleavage system 26.4 86 0.003 27.7 5.2 31 164-195 39-70 (136)
154 1qwy_A Peptidoglycan hydrolase 26.4 28 0.00096 34.9 2.2 22 175-197 239-260 (291)
155 2tpt_A Thymidine phosphorylase 25.4 28 0.00094 37.0 2.1 31 129-159 376-406 (440)
156 3mfy_A V-type ATP synthase alp 24.4 97 0.0033 34.0 6.1 54 139-195 123-179 (588)
157 3it5_A Protease LASA; metallop 24.2 80 0.0027 29.2 4.8 62 119-195 35-104 (182)
158 3nyy_A Putative glycyl-glycine 22.9 34 0.0012 33.4 2.1 19 176-195 183-201 (252)
159 1q9j_A PAPA5, polyketide synth 22.1 5.7E+02 0.019 25.1 16.0 68 371-448 233-315 (422)
160 1hpc_A H protein of the glycin 21.2 1.2E+02 0.0042 26.5 5.1 30 165-195 31-61 (131)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=8e-94 Score=768.07 Aligned_cols=414 Identities=32% Similarity=0.509 Sum_probs=39.9
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccCC
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEEE 198 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~~ 198 (547)
++|+||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+ .|++|++|++|.++++
T Consensus 3 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~-~V~~G~~l~~i~~~~~ 81 (428)
T 3dva_I 3 FEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGT-VATVGQTLITLDAPGY 81 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEcCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCC-EeCCCCEEEEEecCCc
Confidence 589999999999999999999999999999999999999999999999999999999999997 9999999999876554
Q ss_pred CcccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCC-CCCCCCCCCCccccChhhhhhhhhcCCCCCcccc
Q 008996 199 DIPKFKDYSPSVSDAGAAPAKEPSPPPPPKQEEVEKPISTSEPKA-SKPSAASPEDRLFASPVARNLAEEHNVSLSSIKG 277 (547)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~aSP~aR~lA~e~gIDL~~V~G 277 (547)
+....... . .+.++.+ +.+.+. + .+.+.+.+.+.. ........+.++++||+||+||+|+||||++|+|
T Consensus 82 ~~~~~~~~---~--~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~asP~~R~lA~e~gvdl~~v~g 151 (428)
T 3dva_I 82 ENMTFKGQ---E--QEEAKKE--EKTETV-S--KEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQG 151 (428)
T ss_dssp --------------------------------------------------------CCCCCHHHHHHHHHTTCCGGGSCC
T ss_pred cccccccc---c--ccccccC--CCcccC-C--ccccccCCCccccccccccccccccccCHHHHHHHHHcCCCHHHCCC
Confidence 43221100 0 0000000 000000 0 000000000000 0001112234788999999999999999999999
Q ss_pred cCCCCccchhcHHHHHHhcCCCCCCCC--CC---CCCC--CCCCCCccccccchhhhhhhhhcccccCCCcEEEEEeecc
Q 008996 278 TGPNGLIVKADIEDYLASRGKEVPAKA--PK---GKDV--AAPALDYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDIC 350 (547)
Q Consensus 278 TGp~GrItk~DV~~~la~~~~~~~a~~--~a---~~~~--~~~~~~~~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~id 350 (547)
|||+|||+++||++|++......++.. ++ +..+ ......++++|+++|||.||++|.+|++++||||++.++|
T Consensus 152 tG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~evD 231 (428)
T 3dva_I 152 TGKNGRVLKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEAD 231 (428)
T ss_dssp CSTTSCCCTTTTTTTSCC--------------------------------------------------------------
T ss_pred CCCCCceeHHHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEEe
Confidence 999999999999999754321111100 00 0000 0011135678999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCceecc--CcceecCcccEEEEeecCCCeEEeEEccC
Q 008996 351 VDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWAD--EYIRQFKNVNINVAVQTENGLYVPVIRDA 428 (547)
Q Consensus 351 v~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~~~--~~i~~~~~vnIgvAV~~~~GL~vPVI~~a 428 (547)
+|+|+++|+++|...+ ..|.|+|+++||+||+++||++||++|++|++ +.|++++++|||+||++++||++|||+|+
T Consensus 232 vt~l~~~rk~~~~~~~-~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a 310 (428)
T 3dva_I 232 VTKLVAHRKKFKAIAA-EKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHA 310 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhhhhHh-hcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccC
Confidence 9999999999986543 35889999999999999999999999999998 78999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCcccEEEeeCCCceEEEEeccceeeeeecCCCCceEE
Q 008996 429 DKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKF 508 (547)
Q Consensus 429 d~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~~~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~i 508 (547)
+++||.+|++++++|++++|+|+|+++|++||||||||+|+ ||+.+|+|||||||+|||++|+++++|++ .+|++++
T Consensus 311 ~~~sl~eia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~-~G~~~ftpIin~pq~aIl~vG~i~~~pv~--~~g~i~~ 387 (428)
T 3dva_I 311 DRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGS-AGGQWFTPVINHPEVAILGIGRIAEKPIV--RDGEIVA 387 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCC-CCccceEeecCCCCceEEEccccEEEEEE--ECCEEEE
Confidence 99999999999999999999999999999999999999999 99999999999999999999999999998 5789999
Q ss_pred EeEEEEEEeecccccchHHHHHHHHHHHHhhcCcccccC
Q 008996 509 SSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 547 (547)
Q Consensus 509 r~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~lll 547 (547)
|++|+|||+||||+|||+++++||++|+++||||+.|||
T Consensus 388 r~~m~lsls~DHRviDG~~aa~Fl~~lk~~Le~P~~lll 426 (428)
T 3dva_I 388 APMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM 426 (428)
T ss_dssp ---------------------------------------
T ss_pred eeeEEEEEEecccccchHHHHHHHHHHHHHHhCHHHHhh
Confidence 999999999999999999999999999999999999886
No 2
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=8.8e-62 Score=487.34 Aligned_cols=228 Identities=37% Similarity=0.571 Sum_probs=219.5
Q ss_pred CccccccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCc
Q 008996 316 DYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNS 395 (547)
Q Consensus 316 ~~~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~ 395 (547)
.++++|+++|||+||++|.+|++++||+|++.++|+|+|+++|+++|+.++...|.++|+++|++||+++||++||++|+
T Consensus 17 ~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na 96 (256)
T 3mae_A 17 GDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNS 96 (256)
T ss_dssp SCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTTSE
T ss_pred CceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHhhh
Confidence 45688999999999999999999999999999999999999999999766555689999999999999999999999999
Q ss_pred eeccCcceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCccc
Q 008996 396 SWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQ 475 (547)
Q Consensus 396 ~~~~~~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~~ 475 (547)
+|+++.++++++||||+||++++||+||||+|+|++|+.||++++++|++++|+|+|+++|++||||||||+|+ ||+.+
T Consensus 97 ~~~~~~i~~~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~-~G~~~ 175 (256)
T 3mae_A 97 TWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGS-FGSVQ 175 (256)
T ss_dssp EEETTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGG-GTCSE
T ss_pred EEecCEEEEcCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCchhcCCCEEEEecCCC-CCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCccccc
Q 008996 476 FCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 546 (547)
Q Consensus 476 ~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~ll 546 (547)
|+|||||||+|||++|+++++|++ .+|+++++++|+||||||||+|||+++|+||+.|+++||+|+.|.
T Consensus 176 ftpIInppq~aIL~vG~i~~~pv~--~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~~~ 244 (256)
T 3mae_A 176 SMGIINHPQAAILQVESIVKRPVI--IDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKEN 244 (256)
T ss_dssp EECCCCTTSSEEEEEEEEEEEEEE--ETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCTTT
T ss_pred eEcccCCCCceEEEecccEEEEEE--ECCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHHHHhChHHHH
Confidence 999999999999999999999998 468999999999999999999999999999999999999999764
No 3
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=1.1e-61 Score=481.15 Aligned_cols=227 Identities=33% Similarity=0.520 Sum_probs=218.4
Q ss_pred cccccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCcee
Q 008996 318 VDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSW 397 (547)
Q Consensus 318 ~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~ 397 (547)
+++|+++|||+||++|.+|++++||+|++.++|+|+|+++|+++|+.+....|.++|+++|++||+++||++||++|++|
T Consensus 5 ~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~~ 84 (233)
T 1scz_A 5 KRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASI 84 (233)
T ss_dssp CCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCEE
T ss_pred eeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEEE
Confidence 45799999999999999999999999999999999999999999876555568999999999999999999999999999
Q ss_pred ccCcceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCcccEE
Q 008996 398 ADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFC 477 (547)
Q Consensus 398 ~~~~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~~~t 477 (547)
+++.+++++++|||+||++++||++|||+|++++|+.+|+++++++++++|+|+|+++|++||||||||+|+ +|+.+|+
T Consensus 85 ~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~-~G~~~~t 163 (233)
T 1scz_A 85 DGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGV-FGSLMST 163 (233)
T ss_dssp ETTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGG-GTCCCCC
T ss_pred eCCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEeCCC-CCccceE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCcccccC
Q 008996 478 AIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 547 (547)
Q Consensus 478 piinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~lll 547 (547)
|||||||+|||++|+++++|++ .+|+++++++|+||||||||+|||+++|+||+.|+++||+|+.||+
T Consensus 164 pIin~pq~aIl~vG~~~~~pv~--~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 231 (233)
T 1scz_A 164 PIINPPQSAILGMHAIKDRPMA--VNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 231 (233)
T ss_dssp CCCCTTCSEEEEEEEEEEEEEE--ETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred cccCCCCcEEEEccccEEEEEE--ECCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHHHhh
Confidence 9999999999999999999998 4789999999999999999999999999999999999999998763
No 4
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=2.2e-60 Score=474.62 Aligned_cols=227 Identities=32% Similarity=0.488 Sum_probs=217.6
Q ss_pred ccccccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCce
Q 008996 317 YVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSS 396 (547)
Q Consensus 317 ~~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~ 396 (547)
++++|+++|||.||++|.+|++++||+|++.++|+|+|+++|+++|+..+ ..|.++|+++|++||+++||++||++|++
T Consensus 15 ~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~-~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 93 (243)
T 1dpb_A 15 IEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAE-KAGVKLTVLPLLLKACAYLLKELPDFNSS 93 (243)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHH-HTTCCCCSHHHHHHHHHHHHHHSGGGGEE
T ss_pred ceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhh-hccCCCChHHHHHHHHHHHHHhChHhhEE
Confidence 45689999999999999999999999999999999999999999987544 35889999999999999999999999999
Q ss_pred ecc--CcceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCcc
Q 008996 397 WAD--EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIK 474 (547)
Q Consensus 397 ~~~--~~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~ 474 (547)
|++ +.++++++||||+||++++||++|||+|+|++|+.+|+++++++++++|+|+|+++|++||||||||+|+ +|+.
T Consensus 94 ~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~-~g~~ 172 (243)
T 1dpb_A 94 LAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGH-IGGT 172 (243)
T ss_dssp ECTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEECTT-TCCS
T ss_pred EecCCCeEEEeCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCC-CCcc
Confidence 986 4899999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cEEEeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCcccccC
Q 008996 475 QFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 547 (547)
Q Consensus 475 ~~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~lll 547 (547)
+|+|||||||+|||++|+++++|++ .+|+++++++|+||||||||+|||+++|+||+.|+++||+|+.||+
T Consensus 173 ~~tpIin~pq~aIl~vG~~~~~pv~--~~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 243 (243)
T 1dpb_A 173 AFTPIVNAPEVAILGVSKASMQPVW--DGKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL 243 (243)
T ss_dssp CCCCCCCTTSSEEEEECCCEEEEEE--CSSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred ceECccCCCCCeEEEccccEEEEEE--ECCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHHHhCHHhhhC
Confidence 9999999999999999999999998 4789999999999999999999999999999999999999999886
No 5
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=8.7e-61 Score=478.61 Aligned_cols=219 Identities=31% Similarity=0.515 Sum_probs=211.6
Q ss_pred cccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCceecc
Q 008996 320 IPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWAD 399 (547)
Q Consensus 320 ~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~~~ 399 (547)
.|+++|||+||++|.+|++++||+|++.++|+|+|+++|+++|+ .|.|+|+++|++||+++||++||++|++|++
T Consensus 17 rpls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~-----~~~kls~~~~iikAva~AL~~~P~~Na~~~~ 91 (250)
T 3l60_A 17 RPVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS-----AAPEITPFALTLRLLVIALKHNVILNSTWVD 91 (250)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT-----TCTTCCHHHHHHHHHHHHHHHCGGGSEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhh-----cCCCCCHHHHHHHHHHHHHHhCHHhhEEEec
Confidence 39999999999999999999999999999999999999999874 3789999999999999999999999999975
Q ss_pred ----CcceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCccc
Q 008996 400 ----EYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQ 475 (547)
Q Consensus 400 ----~~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~~ 475 (547)
+.|++++++|||+||++++||++|||+|++++|+.||++++++|++++|+|+|+++|++||||||||+|+ ||+.+
T Consensus 92 ~~~~~~i~~~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~-~G~~~ 170 (250)
T 3l60_A 92 SGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGA-LGVDD 170 (250)
T ss_dssp TTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGG-GTCSS
T ss_pred cCCCCeEEEcCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEEEcCCC-CCcce
Confidence 3899999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCccccc
Q 008996 476 FCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESML 546 (547)
Q Consensus 476 ~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~ll 546 (547)
|+|||||||+|||++|+++++|++ .+|++++|++|+||||||||+|||+++|+||+.|+++||+|+.|+
T Consensus 171 ftpIinppq~aIL~vG~i~~~pv~--~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~l~ 239 (250)
T 3l60_A 171 GVPVINHPEAAILGLGAIKPRPVV--VGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETAL 239 (250)
T ss_dssp CCCCCCTTCSEEEEECCCEEEEEE--ETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHT
T ss_pred eEeeeCCCCceEEEecceEEEeEE--ECCEEEEEEEeEEEEEecccccCHHHHHHHHHHHHHHHhCHHHHh
Confidence 999999999999999999999998 478999999999999999999999999999999999999999886
No 6
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-60 Score=472.10 Aligned_cols=230 Identities=53% Similarity=0.888 Sum_probs=218.3
Q ss_pred CCccccccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCC
Q 008996 315 LDYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCN 394 (547)
Q Consensus 315 ~~~~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN 394 (547)
..++++|+++|||+||++|.+|++++||+|++.++|+|+|+++|+++|+..+. +.++|+++|++||+++||++||++|
T Consensus 10 ~~~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~--~~kls~~~~~ikAv~~Al~~~P~~N 87 (239)
T 3b8k_A 10 GVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEG--RSKISVNDFIIKASALACLKVPEAN 87 (239)
T ss_dssp CSCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTT--SSCCCHHHHHHHHHHHHHHHCCCSC
T ss_pred CCceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhc--cCCCCHHHHHHHHHHHHHHhChHhh
Confidence 34677899999999999999999999999999999999999999999875432 3699999999999999999999999
Q ss_pred ceeccCcceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCcc
Q 008996 395 SSWADEYIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIK 474 (547)
Q Consensus 395 ~~~~~~~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~ 474 (547)
++|+++.++++++||||+||++++||++|||+|+|++|+.+|+++++++++++|+|+|+++|+.||||||||+|+ +|++
T Consensus 88 a~~~~~~i~~~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~-~g~~ 166 (239)
T 3b8k_A 88 SSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGM-FGIK 166 (239)
T ss_dssp TTSCCCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCS-SCCS
T ss_pred EEEECCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCC-CCce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cEEEeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCcccccC
Q 008996 475 QFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 547 (547)
Q Consensus 475 ~~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~lll 547 (547)
+|+|||||||+|||++|+++++|++...+|+++++++|+|||+||||+|||+++|+||+.|+++||+|+.||+
T Consensus 167 ~ftpiin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 239 (239)
T 3b8k_A 167 NFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 239 (239)
T ss_dssp SCCCCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTHHHHC
T ss_pred eEECcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHhhhC
Confidence 9999999999999999999999987423688999999999999999999999999999999999999998875
No 7
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=1.8e-59 Score=472.41 Aligned_cols=228 Identities=30% Similarity=0.443 Sum_probs=215.5
Q ss_pred CccccccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCc
Q 008996 316 DYVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNS 395 (547)
Q Consensus 316 ~~~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~ 395 (547)
.++++|+++|||+||++|.+|+ ++||||++.++|+|+|+++|+++|+..+ ..|.++|+++|++||+++||++||++|+
T Consensus 30 ~~~~~p~~~~rk~ia~~m~~S~-~~P~~~~~~evDvt~l~~~r~~~k~~~~-~~g~kls~~~~~ikAva~Al~~~P~~Na 107 (262)
T 2ii3_A 30 KDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPIAF-ARGIKLSFMPFFLKAASLGLLQFPILNA 107 (262)
T ss_dssp CCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHHHH-HTTCCCCSHHHHHHHHHHHHHHCGGGSE
T ss_pred CcceecCCHHHHHHHHHHHHhh-hCCeEEEEEEEEhHHHHHHHHHHhhhhh-hccCCccHHHHHHHHHHHHHHhChHhhE
Confidence 4567899999999999999996 6999999999999999999999987433 3588999999999999999999999999
Q ss_pred eeccC--cceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCc
Q 008996 396 SWADE--YIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGI 473 (547)
Q Consensus 396 ~~~~~--~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~ 473 (547)
+|+++ .+++++++|||+||++++||++|||+|++++|+.+|++++++|++++|+|+|+++|++||||||||+|+ ||+
T Consensus 108 ~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggTftISNlG~-~G~ 186 (262)
T 2ii3_A 108 SVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGS-IGG 186 (262)
T ss_dssp EECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGG-TCC
T ss_pred EEeCCCCEEEEecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEeCCC-CCc
Confidence 99854 799999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred ccEEEeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCcccccC
Q 008996 474 KQFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 547 (547)
Q Consensus 474 ~~~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~lll 547 (547)
.+|+|||||||+|||++|+++++|++. .+|+++++++|+||||||||+|||+++|+||+.|+++||+|+.||+
T Consensus 187 ~~~tPIinppq~aIL~vG~~~~~pv~~-~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ll~ 259 (262)
T 2ii3_A 187 TYAKPVILPPEVAIGALGTIKALPRFN-EKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLL 259 (262)
T ss_dssp SCEECCCCTTCCEEEEECCCEEEEEEC-TTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred cceECccCCCcceEEEcCccEEEEEEe-cCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHHHHhCHHHHHh
Confidence 999999999999999999999999984 2689999999999999999999999999999999999999998763
No 8
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=5.8e-59 Score=459.13 Aligned_cols=215 Identities=29% Similarity=0.494 Sum_probs=207.5
Q ss_pred ccccccchhhhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCce
Q 008996 317 YVDIPHSQIRKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSS 396 (547)
Q Consensus 317 ~~~~p~s~iRk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~ 396 (547)
.+.+|++++||+||++|.+|++++||+|++.++|+|+|+++|+++|+. |.|+|+++|++||+++||++||++|++
T Consensus 6 ~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~-----g~kls~~~~~ikA~~~Al~~~P~~N~~ 80 (224)
T 3rqc_A 6 EEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKAR-----NRKVTVTGFLARIVPSILKQYPYLNAI 80 (224)
T ss_dssp CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTTT-----TCCCCHHHHHHHHHHHHHHHSGGGSBB
T ss_pred ceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhhc-----CCCCCHHHHHHHHHHHHHHhCHHhheE
Confidence 457899999999999999999999999999999999999999998752 789999999999999999999999999
Q ss_pred eccC--cceecCcccEEEEeecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCcc
Q 008996 397 WADE--YIRQFKNVNINVAVQTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIK 474 (547)
Q Consensus 397 ~~~~--~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~ 474 (547)
|+++ .+++++++|||+||++++||++|||+|+|++|+.||+++++++++++|+|+|+++|++||||||||+|+ +|+.
T Consensus 81 ~~~~~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtftISnlG~-~G~~ 159 (224)
T 3rqc_A 81 YDETRRVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFTITNVGT-IGGI 159 (224)
T ss_dssp CCSSTTCCCEECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEEEEECTT-TCCS
T ss_pred EeCCCCEEEEeCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCc-CCcc
Confidence 9987 899999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred cEEEeeCCCceEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCcccccC
Q 008996 475 QFCAIINPPQSGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 547 (547)
Q Consensus 475 ~~tpiinpPq~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~lll 547 (547)
+|+|||||||+|||++|+++++|+ |++|+|||+||||+|||+++|+||+.|+++||+|+.||+
T Consensus 160 ~~tpiin~pq~aIl~vG~~~~~p~----------r~~m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~~ll~ 222 (224)
T 3rqc_A 160 MSTPIINYPEVAILGVHRILEREG----------RKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAIIY 222 (224)
T ss_dssp EEECCCCTTBSEEEEECCCEEETT----------EEECCEEEEEETTTSCHHHHHHHHHHHHHHHTCTTTTTC
T ss_pred ceEeccCCCCceEEEecccEEECC----------ceEEEEEEEeccceecHHHHHHHHHHHHHHHhCHHHHhh
Confidence 999999999999999999998865 789999999999999999999999999999999999886
No 9
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.8e-47 Score=446.46 Aligned_cols=211 Identities=20% Similarity=0.309 Sum_probs=176.2
Q ss_pred hcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCceeccC----cceecCc
Q 008996 332 RLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWADE----YIRQFKN 407 (547)
Q Consensus 332 ~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~~~~----~i~~~~~ 407 (547)
+|.+|+ ++||+|++.++|+|+|+++|+++|+.+....|.|+|+++||+||+++||++||++|++|+++ .++++++
T Consensus 1 ~m~~S~-~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~ 79 (1113)
T 2xt6_A 1 GMNASL-EVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAH 79 (1113)
T ss_dssp -------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSS
T ss_pred Chhhhc-cCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCc
Confidence 577885 89999999999999999999999976655568999999999999999999999999999854 6999999
Q ss_pred ccEEEEeecC--CC---eEEeEEccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCcEEEEeCCCcCCcccEEEeeCC
Q 008996 408 VNINVAVQTE--NG---LYVPVIRDADKKGLSTIAEEVRQLAQKAKDNSLKPQDYEGGTFTVTNLGGPFGIKQFCAIINP 482 (547)
Q Consensus 408 vnIgvAV~~~--~G---L~vPVI~~ad~~sl~eIa~~i~~l~~kar~g~L~~~d~~ggTfTISNlG~~~G~~~~tpiinp 482 (547)
|||||||+++ +| |+||||+|++++|+.+|++++++|++++|+|+|+++|++||||||||+|+ +|+.+|+|||||
T Consensus 80 vnigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~-~G~~~~tPIinp 158 (1113)
T 2xt6_A 80 TNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGT-LGTVHSVPRLMQ 158 (1113)
T ss_dssp CCEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC-------------CT
T ss_pred ccEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCc-CCCcceECCCCC
Confidence 9999999997 66 99999999999999999999999999999999999999999999999999 999999999999
Q ss_pred CceEEEEeccceeeeeecCCC----CceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCccc
Q 008996 483 PQSGILAVGSAEKRVVPGLGP----DQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPES 544 (547)
Q Consensus 483 Pq~aIL~vG~i~~r~v~~~~~----g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~~ 544 (547)
||+|||++|+++++|++...+ |+++++++|+||||||||||||+++|+||++|+++||+|+.
T Consensus 159 pq~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p~~ 224 (1113)
T 2xt6_A 159 GQGAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDF 224 (1113)
T ss_dssp TCSEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCHHH
T ss_pred CCceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCcHH
Confidence 999999999999998873111 58999999999999999999999999999999999999974
No 10
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=6.4e-42 Score=336.45 Aligned_cols=193 Identities=13% Similarity=0.148 Sum_probs=168.4
Q ss_pred hhhhhhhcccccCCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCceeccCcceec
Q 008996 326 RKITASRLLFSKQTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWADEYIRQF 405 (547)
Q Consensus 326 Rk~iA~~m~~S~~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~~~~~i~~~ 405 (547)
||.--... ...++||+|++.++|+|+|+++|++ .++|+++|++||+++||++||++|++|+++.++++
T Consensus 18 R~~~f~~f--~~~~~P~~t~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~ 85 (219)
T 1q23_A 18 RKEHFEAF--QSVAQCTYNQTVQLDITAFLKTVKK----------NKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIW 85 (219)
T ss_dssp THHHHHHH--TTTTCEEEEEEEEEECHHHHHHHHH----------TTCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEE
T ss_pred CHHHHHHh--cCCCCcEEEEEEEEEhHHHHHHHHH----------cCCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEe
Confidence 55444444 3468999999999999999999864 26899999999999999999999999999999999
Q ss_pred CcccEEEEe-ecCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcC-CCCC-CCCCCCcEEEEeCCCcCCcccEEEeeCC
Q 008996 406 KNVNINVAV-QTENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDN-SLKP-QDYEGGTFTVTNLGGPFGIKQFCAIINP 482 (547)
Q Consensus 406 ~~vnIgvAV-~~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g-~L~~-~d~~ggTfTISNlG~~~G~~~~tpiinp 482 (547)
++||||+|| ++++||++||++. ..+++.+|+++++++++++|+| +|++ +|+ ||||||||+|+ +|.+.+.+.+++
T Consensus 86 ~~v~igiAV~~t~~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~-~~ft~i~~~~~~ 162 (219)
T 1q23_A 86 DSVHPCYTVFHEQTETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPW-VSFTSFDLNVAN 162 (219)
T ss_dssp SCCEEEEEEEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTT-CCCSEEEEEESC
T ss_pred cccCeEEEEEecCCcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCcc-ccccccccCCCC
Confidence 999999999 9999999999997 4589999999999999999998 6976 899 99999999998 875444444443
Q ss_pred Cc---eEEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcCcc
Q 008996 483 PQ---SGILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPE 543 (547)
Q Consensus 483 Pq---~aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~P~ 543 (547)
|. ++||++|+++++ ++ +++|+|||+||||+|||+++|+||+.|+++||+|.
T Consensus 163 ~~~~~~pIi~~G~~~~~------~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~~~ 216 (219)
T 1q23_A 163 MDNFFAPVFTMGKYYTQ------GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQ 216 (219)
T ss_dssp CTTCCSCEEEECCCEEE------TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred CccceeEEEecccEEEE------CC----cEEEEEEEEEEchhhChHHHHHHHHHHHHHHhCcc
Confidence 32 599999999875 23 68999999999999999999999999999999964
No 11
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=4.4e-41 Score=329.23 Aligned_cols=182 Identities=13% Similarity=0.165 Sum_probs=163.6
Q ss_pred CCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCceeccCcceecCcccEEEEe-ec
Q 008996 338 QTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAV-QT 416 (547)
Q Consensus 338 ~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~~~~~i~~~~~vnIgvAV-~~ 416 (547)
.++||+|++.++|+|+|+++|++ .++|+++|++||+++||++||++|++|+++.++++++||||+|| ++
T Consensus 23 ~~~P~~~~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 23 RLPCGFSLTSKIDITTLKKSLDD----------SAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp TSCCEEEEEEEEECHHHHHHHHT----------SSCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred CCCceEEEEEEEEHHHHHHHHHH----------hCCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 57999999999999999999853 37899999999999999999999999999999999999999999 99
Q ss_pred CCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhcC-CCCC-CCCCCCcEEEEeCCCcCCcccEEEeeCCC---ceEEEEec
Q 008996 417 ENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKDN-SLKP-QDYEGGTFTVTNLGGPFGIKQFCAIINPP---QSGILAVG 491 (547)
Q Consensus 417 ~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~g-~L~~-~d~~ggTfTISNlG~~~G~~~~tpiinpP---q~aIL~vG 491 (547)
++||++||+++ +.+++.+|+++++++++++|+| +|++ +|++||||||||+|+ ++.+.+...++++ ...|+++|
T Consensus 93 ~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~-~~ft~i~~~~~~g~~~~~PIi~~G 170 (213)
T 3cla_A 93 ETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPW-VNFDSFNLNVANFTDYFAPIITMA 170 (213)
T ss_dssp TTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETT-CCCSCCCCCCSCCTTCCSCEEEEE
T ss_pred CCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCC-CCcccccccCCCCCcccccEEEee
Confidence 99999999987 5689999999999999999996 9988 899999999999998 7765553333333 24799999
Q ss_pred cceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhhcC
Q 008996 492 SAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 541 (547)
Q Consensus 492 ~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE~ 541 (547)
+++++ +| +++|+|||+||||+|||+++|+||+.|+++||+
T Consensus 171 ~~~~~------~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 171 KYQQE------GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp CCEEE------TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred EEEEE------CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 99875 23 689999999999999999999999999999998
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.5e-39 Score=315.08 Aligned_cols=180 Identities=14% Similarity=0.163 Sum_probs=161.6
Q ss_pred CCCcEEEEEeecchHHHHHHHHHHhHHHHHhcCCcccHHHHHHHHHHHHHhhCCCCCceec-cCcceecCcccEEEEe-e
Q 008996 338 QTIPHYYLTVDICVDNLMGLRNQLNSIQEASAGKRISVNDLVIKAAALALRKVPRCNSSWA-DEYIRQFKNVNINVAV-Q 415 (547)
Q Consensus 338 ~~iP~~~l~~~idv~~L~~lr~~l~~~~~~~~g~klTi~~~liKA~a~AL~~~P~lN~~~~-~~~i~~~~~vnIgvAV-~ 415 (547)
.++||+|++.++|+|+|+++|++ .++|+++|++||+++||+++|++|++|+ ++.++++++||||+|| +
T Consensus 25 ~~~P~~~~~~evDvt~l~~~rk~----------~~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~ 94 (217)
T 2i9d_A 25 FQNPQLSITSEVECGGARQRAKA----------AGQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKI 94 (217)
T ss_dssp CSBCEEEEEEEEECHHHHHHHHH----------TTCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEEC
T ss_pred CCCceEEEEEEEEhHHHHHHHHH----------cCCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEe
Confidence 67999999999999999999864 2689999999999999999999999999 8899999999999999 9
Q ss_pred cCCCeEEeEEccCCCCCHHHHHHHHHHHHHHHhc-CCCCCC------CCCCCcEEEEeCCCcCCcccEEEeeCCC---ce
Q 008996 416 TENGLYVPVIRDADKKGLSTIAEEVRQLAQKAKD-NSLKPQ------DYEGGTFTVTNLGGPFGIKQFCAIINPP---QS 485 (547)
Q Consensus 416 ~~~GL~vPVI~~ad~~sl~eIa~~i~~l~~kar~-g~L~~~------d~~ggTfTISNlG~~~G~~~~tpiinpP---q~ 485 (547)
+++||++||+.. ..+++.+|+++++++++++|+ |+|+++ |++||||||||+|+ ++.+.++..++++ ..
T Consensus 95 t~~GL~~pv~~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~-~~ft~i~~~~~~g~~~~~ 172 (217)
T 2i9d_A 95 KENGKFFTTRFP-YHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPD-LYFTSITGTQEKRSGNNY 172 (217)
T ss_dssp STTSCEEEEEEC-CCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTT-CCCSEECCCBCSTTCCSS
T ss_pred cCCceEeEEEec-CCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCc-cccceeecCCCCCccceE
Confidence 999999999974 568999999999999999999 599995 99999999999998 8766554444444 24
Q ss_pred EEEEeccceeeeeecCCCCceEEEeEEEEEEeecccccchHHHHHHHHHHHHhh
Q 008996 486 GILAVGSAEKRVVPGLGPDQYKFSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYI 539 (547)
Q Consensus 486 aIL~vG~i~~r~v~~~~~g~i~ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~L 539 (547)
.|+++|++.++ ++ +++|+|||+||||+|||+++|+||+.|+++|
T Consensus 173 PIi~~Gk~~~~------~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 173 PLLNAGKAIIR------EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp CEEEECCCEEE------TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEecceEEEE------CC----cEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 79999999875 23 6899999999999999999999999999987
No 13
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.96 E-value=2.3e-31 Score=262.65 Aligned_cols=166 Identities=42% Similarity=0.663 Sum_probs=38.7
Q ss_pred ceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCee-eeCCCEEEEEecc
Q 008996 118 HQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKE-IKVGEVIAITVEE 196 (547)
Q Consensus 118 ~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~-v~vG~~l~~i~~~ 196 (547)
.++|+||+||++|+||+|.+|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+ . |.+|++|++|.++
T Consensus 3 ~~ei~mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~-~~V~~G~~l~~i~~~ 81 (229)
T 1zy8_K 3 PIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGS-KNIRLGSLIGLIVEE 81 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEecCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCC-eeecCCCEEEEEecc
Confidence 4689999999999999999999999999999999999999999999999999999999999997 6 9999999998654
Q ss_pred CCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCccccChhhhhhhhhcCCCCCccc
Q 008996 197 EEDIPKFKDYSPSVSDAGAAPAKEPSPPPPPKQEEVEKPISTSEPKASKPSAASPEDRLFASPVARNLAEEHNVSLSSIK 276 (547)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~aSP~aR~lA~e~gIDL~~V~ 276 (547)
+++..... .+... . ++......+.+. ....+. .+.+.. . .......++++||+|||||+|+||||++|+
T Consensus 82 ~~~~~~~~--~~~~~-~--~~~~~~~~~~~~---~~~~~~-~~~~~~-~-~~~~~~~~~~asP~vRklAre~gVDL~~V~ 150 (229)
T 1zy8_K 82 GEDWKHVE--IPKDV-G--PPPPVSKPSEPR---PSPEPQ-ISIPVK-K-EHIPGTLRFRLSPAARNILEKHSLDASQGT 150 (229)
T ss_dssp -----------------------------------------------------------CBCHHHHHHHHHTTCCSSSSC
T ss_pred Cccccccc--ccccc-c--cccccccCCCcc---cccccc-cCCCcc-c-ccccccccccCChHHHHHHHHcCCCccccC
Confidence 43211100 00000 0 000000000000 000000 000000 0 000112367899999999999999999999
Q ss_pred ccCCCCccchhcHHHHHHh
Q 008996 277 GTGPNGLIVKADIEDYLAS 295 (547)
Q Consensus 277 GTGp~GrItk~DV~~~la~ 295 (547)
|||++|||+++||++|++.
T Consensus 151 GTGp~GRItk~DV~~~~~~ 169 (229)
T 1zy8_K 151 ATGPRGIFTKEDALKLVQL 169 (229)
T ss_dssp CCSTTSCBCHHHHHHHHHH
T ss_pred CCCCCCceehHHHHHHHhh
Confidence 9999999999999999864
No 14
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.82 E-value=7.9e-20 Score=164.78 Aligned_cols=100 Identities=46% Similarity=0.816 Sum_probs=83.2
Q ss_pred ccccccccCCCCCCceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCee
Q 008996 104 HLKRGFSSDSGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKE 183 (547)
Q Consensus 104 ~~~r~~~~~~~~~~~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~ 183 (547)
..+|.|...+.+|+.++|+||++|++|++|+|.+|+|++||.|++||+||+||+||++++|+||.+|+|.++++++|++.
T Consensus 13 ~~~~~~~~~~~~p~~~~i~~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~ 92 (128)
T 1y8o_B 13 RLENLYFQGSSYPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRD 92 (128)
T ss_dssp ----------CCCSEEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCS
T ss_pred hhccccCccccCCcceeEEcCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCee
Confidence 34788888889999999999999999999999999999999999999999999999999999999999999999999426
Q ss_pred eeCCCEEEEEeccCCCcccc
Q 008996 184 IKVGEVIAITVEEEEDIPKF 203 (547)
Q Consensus 184 v~vG~~l~~i~~~~~~~~~~ 203 (547)
|.+|++|+++.+.++++..+
T Consensus 93 V~~G~~L~~i~~~~~~~~~~ 112 (128)
T 1y8o_B 93 VPLGTPLCIIVEKEADISAF 112 (128)
T ss_dssp EETTCEEEEEESSGGGGGGG
T ss_pred ecCCCEEEEEecCccchhhh
Confidence 99999999997766555443
No 15
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.79 E-value=2.5e-19 Score=157.07 Aligned_cols=92 Identities=53% Similarity=0.872 Sum_probs=83.3
Q ss_pred CCCCCceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEE
Q 008996 113 SGLPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAI 192 (547)
Q Consensus 113 ~~~~~~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~ 192 (547)
+.+|++++|+||++|++|.+|+|.+|+|++||.|++||+||+||+||+.++|+||.+|+|.++++++|++.|.+|++|++
T Consensus 2 ~~~p~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~ 81 (108)
T 2dne_A 2 SSGSSGQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICI 81 (108)
T ss_dssp CCCCCCEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEE
T ss_pred CCCccceEEecCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEE
Confidence 35788999999999999999999999999999999999999999999999999999999999999999426999999999
Q ss_pred EeccCCCccccc
Q 008996 193 TVEEEEDIPKFK 204 (547)
Q Consensus 193 i~~~~~~~~~~~ 204 (547)
+...++++..+.
T Consensus 82 i~~~~~~~~~~~ 93 (108)
T 2dne_A 82 TVGKPEDIEAFK 93 (108)
T ss_dssp EESCHHHHHHHH
T ss_pred EecCccchhhhh
Confidence 977665554444
No 16
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.75 E-value=5.4e-18 Score=142.57 Aligned_cols=83 Identities=48% Similarity=0.877 Sum_probs=77.4
Q ss_pred CCCceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 115 LPPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 115 ~~~~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
+|++++|.||++|+++.+|+|.+|+|++||.|++||+||+||+||+.++|+||.+|+|.++++++|++.|.+|++|+.+.
T Consensus 2 ~~~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~ 81 (87)
T 3crk_C 2 YPPHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIV 81 (87)
T ss_dssp CCCEEEEECCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEE
T ss_pred CCcceEEeCCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEE
Confidence 57788999999999999999999999999999999999999999999999999999999999999952599999999986
Q ss_pred ccC
Q 008996 195 EEE 197 (547)
Q Consensus 195 ~~~ 197 (547)
..+
T Consensus 82 ~~~ 84 (87)
T 3crk_C 82 EKE 84 (87)
T ss_dssp SSS
T ss_pred ccc
Confidence 543
No 17
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=7.7e-18 Score=145.06 Aligned_cols=82 Identities=55% Similarity=0.907 Sum_probs=77.0
Q ss_pred CCceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeee-eCCCEEEEEe
Q 008996 116 PPHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEI-KVGEVIAITV 194 (547)
Q Consensus 116 ~~~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v-~vG~~l~~i~ 194 (547)
++.++|+||++|++|.+|+|.+|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+ .| .+|++|+.+.
T Consensus 5 ~~~~~i~~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~-~Vv~~G~~l~~i~ 83 (98)
T 2dnc_A 5 SSGIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGS-KNIRLGSLIGLIV 83 (98)
T ss_dssp CCCEEEECCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTC-CCEESSCEEEEEE
T ss_pred cccEEEECCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCC-EEcCCCCEEEEEe
Confidence 456799999999999999999999999999999999999999999999999999999999999997 88 9999999986
Q ss_pred ccCC
Q 008996 195 EEEE 198 (547)
Q Consensus 195 ~~~~ 198 (547)
..++
T Consensus 84 ~~~~ 87 (98)
T 2dnc_A 84 EEGE 87 (98)
T ss_dssp CTTS
T ss_pred cCCC
Confidence 5543
No 18
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.71 E-value=2.7e-17 Score=140.27 Aligned_cols=78 Identities=24% Similarity=0.395 Sum_probs=74.5
Q ss_pred CceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 117 PHQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 117 ~~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
+.++|.||++|+++.+|+|.+|+|++||.|++||+|++||++|+.++|+||.+|+|.++++++|+ .|.+|++|+.+..
T Consensus 3 ~~~~i~~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~-~V~~G~~l~~i~~ 80 (93)
T 1k8m_A 3 QVVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDD-IAYVGKPLVDIET 80 (93)
T ss_dssp CCEEEECCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSC-EECTTSEEEEEEC
T ss_pred cceEEEcCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCC-EeCCCCEEEEEec
Confidence 35789999999999999999999999999999999999999999999999999999999999997 8999999998853
No 19
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.67 E-value=1.5e-16 Score=130.99 Aligned_cols=75 Identities=31% Similarity=0.625 Sum_probs=72.6
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
+++.||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|.++++++|+ .|..|++|+.+.
T Consensus 2 ~~i~~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~-~v~~g~~l~~i~ 76 (79)
T 1ghj_A 2 IDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGD-TVLSGELLGKLT 76 (79)
T ss_dssp EEEECCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTC-EECTTCEEEEEC
T ss_pred cEEECCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcC-EECCCCEEEEEe
Confidence 478999999999999999999999999999999999999999999999999999999999997 899999999874
No 20
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.61 E-value=4.2e-17 Score=134.80 Aligned_cols=75 Identities=29% Similarity=0.564 Sum_probs=72.1
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
+++.||++|+++.+|+|.+|++++||.|++||+|++||++|+..+|+||.+|+|.++++++|+ .|.+|++|+.+.
T Consensus 3 ~~i~~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~-~v~~G~~l~~i~ 77 (80)
T 1pmr_A 3 VDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGT-TVTSRQILGRLR 77 (80)
T ss_dssp CCEECCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTC-EECSSSEEEBCC
T ss_pred cEEEcCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcC-EECCCCEEEEEe
Confidence 578999999999999999999999999999999999999999999999999999999999997 899999998763
No 21
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.60 E-value=1.6e-15 Score=124.13 Aligned_cols=75 Identities=35% Similarity=0.523 Sum_probs=72.3
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
+++.||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++.+++|+ .|..|++|+.+.
T Consensus 2 ~~i~~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~-~v~~g~~l~~i~ 76 (77)
T 2l5t_A 2 YEFKLPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQ-VVPVGSTLLQID 76 (77)
T ss_dssp EEEECCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTC-EECSCSEEEEEE
T ss_pred eEEECCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcC-EECCCCEEEEEE
Confidence 478999999999999999999999999999999999999999999999999999999999997 899999999873
No 22
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.60 E-value=2.2e-15 Score=124.09 Aligned_cols=74 Identities=28% Similarity=0.428 Sum_probs=71.1
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
++|.||++|++ +|+|.+|++++||.|++||+|++||++|+..+|.||.+|+|.++.+++|+ .|..|++|+.+..
T Consensus 3 ~~i~~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~-~V~~G~~l~~i~~ 76 (80)
T 1qjo_A 3 KEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGD-KVKTGSLIMIFEV 76 (80)
T ss_dssp EEECCCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTC-EECTTCCCEEEES
T ss_pred eEEECCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCC-EECCCCEEEEEEc
Confidence 58999999998 99999999999999999999999999999999999999999999999997 9999999999854
No 23
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.57 E-value=1e-14 Score=119.90 Aligned_cols=73 Identities=22% Similarity=0.326 Sum_probs=69.4
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
++|.||++|++ + +|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++.+++|+ .|..|++|+.+..
T Consensus 2 ~~i~~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~-~V~~g~~l~~i~~ 74 (79)
T 1iyu_A 2 EIIRVPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGD-KLKEGDAIIELEP 74 (79)
T ss_dssp EEEECCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTC-EEETTSEEEEEEC
T ss_pred cEEECCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCC-EECCCCEEEEEec
Confidence 47899999996 7 999999999999999999999999999999999999999999999997 8999999998854
No 24
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.54 E-value=3.9e-15 Score=122.93 Aligned_cols=76 Identities=22% Similarity=0.342 Sum_probs=71.7
Q ss_pred ceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 118 HQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 118 ~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
.++|.||++| ++.+|+|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++++++|+ .|..|++|+.+..
T Consensus 2 ~~~i~~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~-~v~~g~~l~~i~~ 77 (81)
T 1gjx_A 2 LVELKVPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGD-KISEGGLIVVVEA 77 (81)
T ss_dssp CEECCCCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSC-EECSSSCCCEECC
T ss_pred cEEEEcCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCC-EeCCCCEEEEEEe
Confidence 4588999999 78999999999999999999999999999999999999999999999999997 8999999998743
No 25
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.36 E-value=1.1e-13 Score=115.58 Aligned_cols=71 Identities=30% Similarity=0.451 Sum_probs=66.7
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
++|.+|.+ |+|.+|++++||.|++||+|++||++|+..+|.||.+|+|.++.+++|+ .|..|++|+.+...
T Consensus 3 ~~i~~p~~------G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~-~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 3 KEVNVPDI------VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGD-KVKTGSLIMIFEVE 73 (85)
T ss_dssp SCCCCCSC------CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTC-CBCTTSEEEEEECC
T ss_pred cEEECCCe------EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCC-EECCCCEEEEEEcC
Confidence 46789988 8999999999999999999999999999999999999999999999997 99999999998653
No 26
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.29 E-value=4.2e-12 Score=105.85 Aligned_cols=64 Identities=22% Similarity=0.378 Sum_probs=60.3
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
.+|+|.+|++++||.|++||+|++||++|+.++|.||.+|+|.++. ++|+ .|.+|++|+.+.+.
T Consensus 12 ~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~-~V~~G~~l~~i~~~ 75 (84)
T 2kcc_A 12 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGA-VLEAGCVVARLELD 75 (84)
T ss_dssp SSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTC-CCCTTCCCEEEECS
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCC-EECCCCEEEEEeCC
Confidence 5689999999999999999999999999999999999999999999 9997 89999999988543
No 27
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.28 E-value=1.2e-11 Score=99.28 Aligned_cols=64 Identities=20% Similarity=0.353 Sum_probs=60.8
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
.+|+|.+|++++||.|++||+|+++|++|...+|.||.+|+|.++.+++|+ .|..|++|+.+..
T Consensus 6 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~-~V~~G~~l~~i~~ 69 (72)
T 1z6h_A 6 MAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGD-FVNEGDVLLELSN 69 (72)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTC-EECTTCEEEEEGG
T ss_pred ccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCC-EECCCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999999997 8999999998743
No 28
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.25 E-value=1.9e-12 Score=110.30 Aligned_cols=78 Identities=18% Similarity=0.290 Sum_probs=29.3
Q ss_pred CCCceEEecCCCCCCC----CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEE
Q 008996 115 LPPHQEIGMPSLSPTM----QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVI 190 (547)
Q Consensus 115 ~~~~~~i~mP~lg~~~----~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l 190 (547)
+....+|.+|...... ..|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|.++.+++|+ .|..|++|
T Consensus 12 ~~~~~~v~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~-~V~~G~~L 90 (94)
T 2jku_A 12 DLGTENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGD-TVGEGDLL 90 (94)
T ss_dssp ------------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC---------------------------------
T ss_pred cccCEEEEcCCCCceEEECCCCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcC-EECCCCEE
Confidence 3445688999998775 689999999999999999999999999999999999999999999999997 89999999
Q ss_pred EEE
Q 008996 191 AIT 193 (547)
Q Consensus 191 ~~i 193 (547)
+.+
T Consensus 91 ~~i 93 (94)
T 2jku_A 91 VEL 93 (94)
T ss_dssp ---
T ss_pred EEE
Confidence 875
No 29
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=99.22 E-value=4.3e-12 Score=91.72 Aligned_cols=40 Identities=33% Similarity=0.646 Sum_probs=37.6
Q ss_pred cccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHH
Q 008996 255 LFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLA 294 (547)
Q Consensus 255 v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la 294 (547)
+++||+||++|+|+||||+.|+|||++|||+++||++|++
T Consensus 1 ~~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~~ 40 (41)
T 2eq9_C 1 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE 40 (41)
T ss_dssp CCBCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHHHHHC
T ss_pred CCCChHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHhc
Confidence 4579999999999999999999999999999999999863
No 30
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=99.21 E-value=3.7e-12 Score=98.93 Aligned_cols=43 Identities=44% Similarity=0.752 Sum_probs=39.4
Q ss_pred CccccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHHh
Q 008996 253 DRLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLAS 295 (547)
Q Consensus 253 ~~v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la~ 295 (547)
.++.+||+||+||+|+||||+.|+|||++|||+++||++|++.
T Consensus 6 ~~v~aSPaaRrlA~e~gIdl~~V~GTG~~GRItk~DV~~~~~~ 48 (58)
T 3rnm_E 6 RKTLATPAVRNLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 48 (58)
T ss_dssp --CCCCHHHHHHHHHTTCCGGGCCCCSGGGCCCHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHHhh
Confidence 4678999999999999999999999999999999999999865
No 31
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=3.7e-11 Score=103.33 Aligned_cols=63 Identities=22% Similarity=0.398 Sum_probs=59.7
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
.+|+|.+|++++||.|++||+|+++|++|+..+|+||.+|+|. +++++|+ .|..|++|+.+..
T Consensus 24 ~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~-~V~~G~~l~~i~~ 86 (100)
T 2dn8_A 24 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGA-VLEAGCVVARLEL 86 (100)
T ss_dssp SCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTC-EECSSCEEEEECC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCC-EECCCCEEEEEEc
Confidence 4699999999999999999999999999999999999999999 9999997 8999999998843
No 32
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.15 E-value=1.4e-10 Score=93.15 Aligned_cols=62 Identities=24% Similarity=0.398 Sum_probs=59.3
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
..|+|.+|++++||.|++||+|+++|++|...+|.||.+|+|.++.+++|+ .|..|++|+.+
T Consensus 12 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~-~v~~g~~l~~i 73 (74)
T 2d5d_A 12 MPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGE-AVDTGQPLIEL 73 (74)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTC-EECTTCEEEEE
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcC-EECCCCEEEEE
Confidence 459999999999999999999999999999999999999999999999997 89999999876
No 33
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=99.14 E-value=1.5e-11 Score=88.36 Aligned_cols=37 Identities=38% Similarity=0.587 Sum_probs=35.9
Q ss_pred cChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHH
Q 008996 257 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYL 293 (547)
Q Consensus 257 aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~l 293 (547)
+||+||++|+|+|||++.|+|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq8_C 2 AAPSIRRLARELGVDLTRLRGTGLAGRITEEDVRRAA 38 (40)
T ss_dssp CCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHHHHH
T ss_pred CChHHHHHHHHhCCChhhcCCCCCCCceeHHHHHHHh
Confidence 6999999999999999999999999999999999986
No 34
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.13 E-value=8e-11 Score=96.66 Aligned_cols=56 Identities=25% Similarity=0.430 Sum_probs=53.9
Q ss_pred EEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 137 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 137 ~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
+|++++||.|++||+|++||++|+..+|+||.+|+|.++.+++|+ .|..|++|+.+
T Consensus 24 ~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~-~V~~G~~L~~i 79 (80)
T 1bdo_A 24 KAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQ-PVEFDEPLVVI 79 (80)
T ss_dssp CCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTC-EECTTCEEEEE
T ss_pred ccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCC-EECCCCEEEEE
Confidence 479999999999999999999999999999999999999999997 99999999876
No 35
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=99.13 E-value=1.1e-11 Score=89.15 Aligned_cols=37 Identities=41% Similarity=0.587 Sum_probs=35.0
Q ss_pred cChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHH
Q 008996 257 ASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYL 293 (547)
Q Consensus 257 aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~l 293 (547)
+||+||++|+|+||||+.|+|||++|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMRHL 38 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTTC-
T ss_pred CCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHh
Confidence 6999999999999999999999999999999999875
No 36
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.12 E-value=1.9e-10 Score=93.48 Aligned_cols=62 Identities=23% Similarity=0.400 Sum_probs=59.2
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
..|.|.+|++++||.|++||+|+++|++|+..+|.||.+|+|.++.+.+|+ .|..|++|+.+
T Consensus 15 ~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~-~v~~G~~l~~i 76 (77)
T 1dcz_A 15 LAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERD-AVQGGQGLIKI 76 (77)
T ss_dssp SSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTC-BCCBTSEEEEE
T ss_pred CCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcC-EECCCCEEEEE
Confidence 458999999999999999999999999999999999999999999999997 89999999876
No 37
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=99.11 E-value=1.7e-11 Score=92.90 Aligned_cols=41 Identities=44% Similarity=0.610 Sum_probs=38.1
Q ss_pred ccccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHH
Q 008996 254 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLA 294 (547)
Q Consensus 254 ~v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la 294 (547)
++.+||+||+||+|+||||+.|+|||++|||+++||++|++
T Consensus 9 ~~~asP~aR~lA~e~gidl~~V~gtG~~GrI~k~DV~~~~~ 49 (51)
T 1bal_A 9 NDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLA 49 (51)
T ss_dssp SCCCCGGGTTHHHHTTCCTTSSCCCSTTSCCCHHHHTTTSC
T ss_pred CCCCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHhc
Confidence 45689999999999999999999999999999999998754
No 38
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=99.11 E-value=2.4e-11 Score=91.34 Aligned_cols=41 Identities=41% Similarity=0.741 Sum_probs=38.7
Q ss_pred ccccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHH
Q 008996 254 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLA 294 (547)
Q Consensus 254 ~v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la 294 (547)
++.+||+||+||+|+||||+.|+|||++|||+++||++|+.
T Consensus 6 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~k~Dv~~~~~ 46 (49)
T 1w85_I 6 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 46 (49)
T ss_dssp CCCCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHC
T ss_pred cccCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHHh
Confidence 56689999999999999999999999999999999999974
No 39
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.10 E-value=2.2e-10 Score=98.29 Aligned_cols=66 Identities=24% Similarity=0.338 Sum_probs=61.8
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccC
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
..|+|.+|++++||.|++||+|++||++|+..+|.||.+|+|.++.+.+|+ .|..|++|+.+.+.+
T Consensus 21 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~-~V~~G~~L~~i~~~~ 86 (99)
T 2ejm_A 21 MTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGA-QANRHTPLVEFEEEE 86 (99)
T ss_dssp SSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTE-EECTTCBCEEECCCC
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCC-EECCCCEEEEEECCC
Confidence 469999999999999999999999999999999999999999999999997 999999999986543
No 40
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=99.01 E-value=1.3e-10 Score=91.49 Aligned_cols=43 Identities=42% Similarity=0.710 Sum_probs=40.0
Q ss_pred ccccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHHhc
Q 008996 254 RLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLASR 296 (547)
Q Consensus 254 ~v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la~~ 296 (547)
++++||+||+||+++||||+.|.|||++|||+++||++|+...
T Consensus 4 ~~~asPaaRklA~e~gidl~~V~gtG~~GrItk~DV~~~~~~~ 46 (62)
T 1w4i_A 4 EVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEET 46 (62)
T ss_dssp SSEECHHHHHHHHHHTCCGGGSCCCSTTSEECHHHHHHHHHHH
T ss_pred cccCChHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHHhcc
Confidence 4678999999999999999999999999999999999998744
No 41
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=99.01 E-value=7.5e-11 Score=93.46 Aligned_cols=43 Identities=35% Similarity=0.495 Sum_probs=39.9
Q ss_pred CccccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHHh
Q 008996 253 DRLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLAS 295 (547)
Q Consensus 253 ~~v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la~ 295 (547)
.++.+||+||++|+++||||+.|+|||++|||+++||++|++.
T Consensus 8 ~~~~asPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 50 (64)
T 2f60_K 8 LRFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQL 50 (64)
T ss_dssp HHHHBCHHHHHHHHHTTCCGGGSCCCSGGGCBCHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHHhc
Confidence 3567899999999999999999999999999999999999864
No 42
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.01 E-value=4.8e-10 Score=126.57 Aligned_cols=62 Identities=27% Similarity=0.399 Sum_probs=59.7
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
..|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+ .|.+|++|+.+
T Consensus 619 ~~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~-~v~~g~~l~~i 680 (681)
T 3n6r_A 619 MPGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGN-SLAVDDVIMEF 680 (681)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTC-EECTTCEEEEE
T ss_pred CcEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcC-EeCCCCEEEEE
Confidence 349999999999999999999999999999999999999999999999997 99999999986
No 43
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=98.99 E-value=3.3e-10 Score=91.37 Aligned_cols=44 Identities=41% Similarity=0.720 Sum_probs=40.5
Q ss_pred CccccChhhhhhhhhcCCCCCcccccCCCCccchhcHHHHHHhc
Q 008996 253 DRLFASPVARNLAEEHNVSLSSIKGTGPNGLIVKADIEDYLASR 296 (547)
Q Consensus 253 ~~v~aSP~aR~lA~e~gIDL~~V~GTGp~GrItk~DV~~~la~~ 296 (547)
.++++||+||+||+|+||||+.|+|||++|||+++||++|++..
T Consensus 14 ~~~~aSPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~~ 57 (70)
T 2coo_A 14 RKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQ 57 (70)
T ss_dssp CSCCSCHHHHHHHHHHTCCGGGSCCCSTTSCCCHHHHHHHHHHH
T ss_pred CccccCcHHHHHHHHhCCCccccCCCCCCCceeHHHHHHHHhcc
Confidence 35678999999999999999999999999999999999998753
No 44
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=98.99 E-value=5.1e-10 Score=133.31 Aligned_cols=61 Identities=21% Similarity=0.406 Sum_probs=59.2
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
.|+|.+|+|++||.|++||+|++|||||++++|+||.+|+|.++++++|+ .|.+|++|++|
T Consensus 1175 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~-~V~~G~~l~~i 1235 (1236)
T 3va7_A 1175 TGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGD-MVEAGDLVAVI 1235 (1236)
T ss_dssp CEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTC-EECTTCEEEEE
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcC-EeCCCCEEEEe
Confidence 39999999999999999999999999999999999999999999999997 99999999987
No 45
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=98.91 E-value=1.4e-09 Score=128.97 Aligned_cols=63 Identities=16% Similarity=0.275 Sum_probs=60.4
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
..|+|.+|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+ .|.+|++|+.|.
T Consensus 1084 ~~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~-~V~~g~~l~~i~ 1146 (1150)
T 3hbl_A 1084 MPGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGD-TIATGDLLIEIE 1146 (1150)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTC-EECTTBEEEEEC
T ss_pred ceEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCC-EeCCCCEEEEEe
Confidence 349999999999999999999999999999999999999999999999997 999999999984
No 46
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=98.91 E-value=1.3e-10 Score=130.96 Aligned_cols=63 Identities=21% Similarity=0.305 Sum_probs=0.0
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
..|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+ .|.+|++|+.+.
T Consensus 609 ~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~-~v~~g~~l~~i~ 671 (675)
T 3u9t_A 609 MNGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGE-LVEEGTPLVELD 671 (675)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcC-CcCCCCEEEEEe
Confidence 458999999999999999999999999999999999999999999999997 999999999874
No 47
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.66 E-value=2.5e-08 Score=87.40 Aligned_cols=67 Identities=24% Similarity=0.323 Sum_probs=60.3
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCee-----------------------------EEEecCcCeEEEEEeeCCCC
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKAT-----------------------------VEMECMEEGYLAKIVKGDGS 181 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~-----------------------------~ev~ap~~G~l~ki~~~~G~ 181 (547)
..|+|.+|++++||.|++||+|+++++.++. ..|.||.+|+|.++.+.+|+
T Consensus 8 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~ 87 (116)
T 2k32_A 8 VSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIGD 87 (116)
T ss_dssp SCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTTC
T ss_pred CCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCCC
Confidence 4699999999999999999999999998655 48999999999999999997
Q ss_pred eeeeCC-CEEEEEeccCC
Q 008996 182 KEIKVG-EVIAITVEEEE 198 (547)
Q Consensus 182 ~~v~vG-~~l~~i~~~~~ 198 (547)
.|..| ++|+.|.+.+.
T Consensus 88 -~v~~g~~~l~~i~~~~~ 104 (116)
T 2k32_A 88 -YVSASTTELVRVTNLNP 104 (116)
T ss_dssp -EECTTTSCCEEEECSCT
T ss_pred -EEcCCCcEEEEEECCCe
Confidence 99999 99999876543
No 48
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.63 E-value=1e-08 Score=115.83 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=58.8
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
+|+|.+|+|++||.|++||+|++||+||+.++|+||.+|+|.++.+++|+ .|.+|++|+.+
T Consensus 657 ~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~-~V~~G~~L~~i 717 (718)
T 3bg3_A 657 PGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDM-TLEGDDLILEI 717 (718)
T ss_dssp CEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEE-EECSSCEEECB
T ss_pred CeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCC-EeCCCCEEEEe
Confidence 69999999999999999999999999999999999999999999999997 89999999865
No 49
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.58 E-value=2.8e-08 Score=118.12 Aligned_cols=62 Identities=24% Similarity=0.471 Sum_probs=53.4
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEE
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i 193 (547)
..|+|.+|+|++||.|++||+|++||+||++++|+||.+|+|.++.+++|+ .|..|++|+.+
T Consensus 1102 ~~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~-~V~~g~~l~~i 1163 (1165)
T 2qf7_A 1102 MPGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGD-QIDAKDLLAVY 1163 (1165)
T ss_dssp SCEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSC-EECTTBEEEEC
T ss_pred CCeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCC-EECCCCEEEEe
Confidence 359999999999999999999999999999999999999999999999997 89999999876
No 50
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.55 E-value=9.5e-08 Score=86.67 Aligned_cols=68 Identities=19% Similarity=0.238 Sum_probs=57.0
Q ss_pred EEecCCCCCCCCeeEEEEEE-cCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEE---eeCCCCeeee---CCC-EEE
Q 008996 120 EIGMPSLSPTMQEGNIARWL-KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKI---VKGDGSKEIK---VGE-VIA 191 (547)
Q Consensus 120 ~i~mP~lg~~~~eg~i~~w~-v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki---~~~~G~~~v~---vG~-~l~ 191 (547)
.+.+|.+|+ |.... +++||.|++||+||+||++|+..+|.||.+|+|.++ ++.+|+ .|. .|+ .|+
T Consensus 38 ~~a~~~lG~------i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~-~Vn~dp~g~GwL~ 110 (136)
T 1zko_A 38 NHAQEQLGD------VVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPE-LINKDPEGEGWLF 110 (136)
T ss_dssp HHHHHHHCS------EEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTT-HHHHCTTTTTCCE
T ss_pred hhhcccCCC------cEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCcc-CcccCCCCCeEEE
Confidence 345666664 33333 499999999999999999999999999999999999 889997 888 888 888
Q ss_pred EEe
Q 008996 192 ITV 194 (547)
Q Consensus 192 ~i~ 194 (547)
.+.
T Consensus 111 ~i~ 113 (136)
T 1zko_A 111 KME 113 (136)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 51
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.11 E-value=1.6e-06 Score=78.16 Aligned_cols=55 Identities=20% Similarity=0.187 Sum_probs=44.8
Q ss_pred EEecCCCCCCCCeeEEEEEEc-CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCC
Q 008996 120 EIGMPSLSPTMQEGNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDG 180 (547)
Q Consensus 120 ~i~mP~lg~~~~eg~i~~w~v-~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G 180 (547)
++.+|.+|+ |....+ ++||.|++||+||+||++|+..+|.||.+|+|.++..+.+
T Consensus 29 d~a~~~lG~------i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~ 84 (131)
T 1hpc_A 29 DHAQDHLGE------VVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLT 84 (131)
T ss_dssp HHHHHHHCS------EEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHH
T ss_pred hhhcccCCC------ceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhh
Confidence 445566664 444444 9999999999999999999999999999999999964433
No 52
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.11 E-value=3.4e-06 Score=75.69 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=45.4
Q ss_pred EEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCC
Q 008996 120 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDG 180 (547)
Q Consensus 120 ~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G 180 (547)
++.+|.+|+ +....+ .++||.|++||+||+||++|+..+|.||.+|+|.++....+
T Consensus 30 d~a~~~lG~-i~~v~l----p~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~ 85 (128)
T 3a7l_A 30 EHAQELLGD-MVFVDL----PEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALS 85 (128)
T ss_dssp HHHHHHHCS-EEEEEC----CCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGG
T ss_pred hHHhccCCc-eEEEEe----cCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhc
Confidence 455677765 333333 59999999999999999999999999999999999965443
No 53
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.05 E-value=4.8e-06 Score=74.71 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=51.7
Q ss_pred EEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeC---CCCeee---eCCC-EEEE
Q 008996 120 EIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKG---DGSKEI---KVGE-VIAI 192 (547)
Q Consensus 120 ~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~---~G~~~v---~vG~-~l~~ 192 (547)
++.+|.+|+ +....+ .++||.|++||+||+||++|+..+|.||.+|+|.++... ..+ .| +-|+ -|+.
T Consensus 29 ~~a~~~lG~-i~~v~l----p~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~-lvn~dpy~~gWl~~ 102 (128)
T 1onl_A 29 DYAQDALGD-VVYVEL----PEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPE-LVNQDPYGEGWIFR 102 (128)
T ss_dssp HHHHHHHCS-EEEEEC----BCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTT-HHHHCTTTTTCCEE
T ss_pred hHHhhcCCC-ceEEEe----cCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChh-hhccCCCCCccEEE
Confidence 445666665 333333 599999999999999999999999999999999999643 343 34 4555 5665
Q ss_pred Ee
Q 008996 193 TV 194 (547)
Q Consensus 193 i~ 194 (547)
+.
T Consensus 103 i~ 104 (128)
T 1onl_A 103 LK 104 (128)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 54
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=97.59 E-value=8.6e-05 Score=78.72 Aligned_cols=66 Identities=20% Similarity=0.271 Sum_probs=58.3
Q ss_pred CeeEEEEEEc-CCCCeecCCCeEEEEEeC------------------------------------------------Cee
Q 008996 131 QEGNIARWLK-KEGDKVSPGEVLCEVETD------------------------------------------------KAT 161 (547)
Q Consensus 131 ~eg~i~~w~v-~~Gd~V~~gd~l~evEtd------------------------------------------------Ka~ 161 (547)
..|.|.+++| ++||.|++||+|+++++. ...
T Consensus 128 ~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~ 207 (413)
T 3ne5_B 128 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTR 207 (413)
T ss_dssp SCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCE
T ss_pred cCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccc
Confidence 4599999998 999999999999999952 235
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccC
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
..|.||++|+|.++.+.+|+ .|..|++|+.|.+.+
T Consensus 208 ~~I~AP~~G~V~~~~v~~G~-~V~~G~~l~~I~~~~ 242 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAGM-NIAKDNVVAKIQGMD 242 (413)
T ss_dssp EEEECSSSEEEEECCCCTTC-EECTTSCSEEEEEEE
T ss_pred EEEEcCCCeEEEEEEcCCCC-EECCCCcEEEEeCCC
Confidence 68999999999999999997 999999999987543
No 55
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.59 E-value=8e-05 Score=76.79 Aligned_cols=65 Identities=17% Similarity=0.284 Sum_probs=57.9
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEeCCe---------------------------------------------------
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVETDKA--------------------------------------------------- 160 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEtdKa--------------------------------------------------- 160 (547)
.|.|.++++++||.|++||+|+++++...
T Consensus 65 ~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a~ 144 (359)
T 3lnn_A 65 AGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASE 144 (359)
T ss_dssp CEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999998532
Q ss_pred -------------------------eEEEecCcCeEEEEEeeCCCCeeeeC-CCEEEEEeccC
Q 008996 161 -------------------------TVEMECMEEGYLAKIVKGDGSKEIKV-GEVIAITVEEE 197 (547)
Q Consensus 161 -------------------------~~ev~ap~~G~l~ki~~~~G~~~v~v-G~~l~~i~~~~ 197 (547)
...|.||++|+|.++.+..|+ .|.. |++|+.+.+.+
T Consensus 145 l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~-~v~~~g~~l~~i~~~~ 206 (359)
T 3lnn_A 145 SQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGA-YWNDTTASLMTVADLS 206 (359)
T ss_dssp HHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTC-EECCSSCCSEEEECCS
T ss_pred HHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCc-eeCCCCcceEEEecCC
Confidence 357999999999999999997 8998 99999887643
No 56
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.53 E-value=2.7e-05 Score=77.47 Aligned_cols=66 Identities=20% Similarity=0.289 Sum_probs=57.1
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCC---------------------------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDK--------------------------------------------------- 159 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdK--------------------------------------------------- 159 (547)
..|+|.+++|++||.|++||+|+++++..
T Consensus 29 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~ 108 (277)
T 2f1m_A 29 VSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQ 108 (277)
T ss_dssp SCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 35999999999999999999999998742
Q ss_pred --------------------eeEEEecCcCeEEEEEeeCCCCeeeeCC--CEEEEEeccC
Q 008996 160 --------------------ATVEMECMEEGYLAKIVKGDGSKEIKVG--EVIAITVEEE 197 (547)
Q Consensus 160 --------------------a~~ev~ap~~G~l~ki~~~~G~~~v~vG--~~l~~i~~~~ 197 (547)
....|.||++|+|..+.+.+|+ .|..| ++|+.|.+.+
T Consensus 109 ~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~-~v~~g~~~~l~~i~~~~ 167 (277)
T 2f1m_A 109 QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGA-LVQNGQATALATVQQLD 167 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTC-EECTTCSSCSEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCC-EEcCCCCceeEEEecCC
Confidence 1247999999999999999997 99999 5899887644
No 57
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.49 E-value=0.00016 Score=64.38 Aligned_cols=46 Identities=24% Similarity=0.276 Sum_probs=40.0
Q ss_pred eEEEEEEc-CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeC
Q 008996 133 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKG 178 (547)
Q Consensus 133 g~i~~w~v-~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~ 178 (547)
|.|+.... ++|+.|++||+++.||++|+..+|.||.+|+|.++...
T Consensus 32 Gdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~ 78 (125)
T 3klr_A 32 GDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKA 78 (125)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGG
T ss_pred CCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhh
Confidence 45655555 79999999999999999999999999999999998543
No 58
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.47 E-value=9.3e-05 Score=75.75 Aligned_cols=66 Identities=15% Similarity=0.232 Sum_probs=56.4
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCC---------------------------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDK--------------------------------------------------- 159 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdK--------------------------------------------------- 159 (547)
..|+|.+++|++||.|++||+|+++++..
T Consensus 38 ~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 117 (341)
T 3fpp_A 38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLD 117 (341)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHH
T ss_pred CCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 35999999999999999999999998741
Q ss_pred ----------------------------------eeEEEecCcCeEEEEEeeCCCCeeeeCCCE---EEEEeccC
Q 008996 160 ----------------------------------ATVEMECMEEGYLAKIVKGDGSKEIKVGEV---IAITVEEE 197 (547)
Q Consensus 160 ----------------------------------a~~ev~ap~~G~l~ki~~~~G~~~v~vG~~---l~~i~~~~ 197 (547)
....|.||++|+|.++.+.+|+ .|..|++ |+.+.+..
T Consensus 118 ~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~-~v~~g~~~~~l~~i~~~~ 191 (341)
T 3fpp_A 118 NAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQ-TVIAAQQAPNILTLADMS 191 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTC-EECCTTSCCCCEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCC-EEecCCCCceEEEEecCC
Confidence 1146999999999999999997 9999987 88776543
No 59
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.34 E-value=0.00031 Score=63.89 Aligned_cols=46 Identities=24% Similarity=0.308 Sum_probs=39.1
Q ss_pred eEEEEEEc-CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeC
Q 008996 133 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKG 178 (547)
Q Consensus 133 g~i~~w~v-~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~ 178 (547)
|.|+-.-. ++|+.|++||+++.||+.|+..+|.||.+|+|.++...
T Consensus 54 GdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~ 100 (143)
T 3mxu_A 54 GDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAA 100 (143)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGG
T ss_pred CCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhh
Confidence 34544433 78999999999999999999999999999999988543
No 60
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.29 E-value=0.00033 Score=63.34 Aligned_cols=44 Identities=25% Similarity=0.368 Sum_probs=38.4
Q ss_pred eEEEEEEc-CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEe
Q 008996 133 GNIARWLK-KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIV 176 (547)
Q Consensus 133 g~i~~w~v-~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~ 176 (547)
|.|+-.-. ++|+.|++||.++.||++|+..+|.||.+|+|.++.
T Consensus 49 Gdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN 93 (137)
T 3tzu_A 49 GDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVN 93 (137)
T ss_dssp CSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEeh
Confidence 44554433 899999999999999999999999999999999884
No 61
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.15 E-value=0.00014 Score=75.64 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=56.7
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCC---------------------------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDK--------------------------------------------------- 159 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdK--------------------------------------------------- 159 (547)
..|+|.++++++||.|++||+|++|++..
T Consensus 50 v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~ 129 (369)
T 1vf7_A 50 VNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVE 129 (369)
T ss_dssp SCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 35999999999999999999999998642
Q ss_pred ------eeEEEecCcCeEEEEEeeCCCCeeeeCC--CEEEEEeccC
Q 008996 160 ------ATVEMECMEEGYLAKIVKGDGSKEIKVG--EVIAITVEEE 197 (547)
Q Consensus 160 ------a~~ev~ap~~G~l~ki~~~~G~~~v~vG--~~l~~i~~~~ 197 (547)
....|.||++|+|.++.+.+|+ .|..| ++|+.|.+.+
T Consensus 130 ~a~~~l~~~~I~AP~~G~V~~~~v~~G~-~V~~g~g~~l~~i~~~~ 174 (369)
T 1vf7_A 130 QARINLRYTKVLSPISGRIGRSAVTEGA-LVTNGQANAMATVQQLD 174 (369)
T ss_dssp HHHHHHHTTEEECSSSEEECCCSSCBTC-EECTTCSSCSEEEECCS
T ss_pred HHHHhhcCCEEECCCCeEEEEEEcCCCC-eEcCCCCceeEEEecCC
Confidence 1247999999999999999997 99995 8999886543
No 62
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=96.99 E-value=0.0011 Score=60.91 Aligned_cols=44 Identities=23% Similarity=0.339 Sum_probs=37.6
Q ss_pred eEEEEEE-cCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEe
Q 008996 133 GNIARWL-KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIV 176 (547)
Q Consensus 133 g~i~~w~-v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~ 176 (547)
|.|+-.- -++|+.|++||.++.||+.|+..+|.||.+|+|.++.
T Consensus 59 GdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN 103 (155)
T 3hgb_A 59 GDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVN 103 (155)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEh
Confidence 3444433 3789999999999999999999999999999999874
No 63
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=96.49 E-value=0.00016 Score=74.73 Aligned_cols=63 Identities=17% Similarity=0.355 Sum_probs=53.4
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCe--------------------------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKA-------------------------------------------------- 160 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa-------------------------------------------------- 160 (547)
..|.|.+++|++||.|++||+|+++++...
T Consensus 39 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 118 (369)
T 4dk0_A 39 VSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLN 118 (369)
T ss_dssp SCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHH
T ss_pred CCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 358999999999999999999999987421
Q ss_pred -----------------------------------eEEEecCcCeEEEEEeeCCCCeeeeCCCE---EEEEe
Q 008996 161 -----------------------------------TVEMECMEEGYLAKIVKGDGSKEIKVGEV---IAITV 194 (547)
Q Consensus 161 -----------------------------------~~ev~ap~~G~l~ki~~~~G~~~v~vG~~---l~~i~ 194 (547)
...|.||++|+|.++.+.+|+ .|..|++ |+.+.
T Consensus 119 ~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~-~v~~g~~~~~l~~i~ 189 (369)
T 4dk0_A 119 TAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQ-TVNSNQTTPTIIKVA 189 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTC-BCCTTTSCCCCBBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCC-CccCCCCcceEEEEc
Confidence 134999999999999999997 9999998 55543
No 64
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.31 E-value=0.0089 Score=61.56 Aligned_cols=59 Identities=22% Similarity=0.253 Sum_probs=49.5
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe----CCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 135 IARWLKKEGDKVSPGEVLCEVET----DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evEt----dKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
+.+..++.||.|++||+|++|.. .....+|.||.+|+|..... .- .|..|+.|+.|...
T Consensus 267 l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~~~~--~~-~V~~G~~l~~Ia~~ 329 (331)
T 3na6_A 267 LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLISRHF--PG-MIKSGDCAAVIGVV 329 (331)
T ss_dssp EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEEEEC--SS-EECTTCEEEEEECB
T ss_pred EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEEEeC--CC-ccCCCCEEEEEecc
Confidence 66788999999999999999997 35678999999999976543 33 68999999988643
No 65
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.04 E-value=0.015 Score=60.71 Aligned_cols=58 Identities=12% Similarity=0.174 Sum_probs=49.4
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe------CCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 135 IARWLKKEGDKVSPGEVLCEVET------DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evEt------dKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
|....++.||.|++||+|++|.. .....+|.||.+|+|.-.. ..- .|..|+.|+.|..
T Consensus 300 l~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi~~~--~~p-~V~~G~~l~~i~~ 363 (368)
T 3fmc_A 300 MVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPILHF--ASA-SVHQGTELYKVMT 363 (368)
T ss_dssp EEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEEEEC--SSS-EECTTCEEEEEEE
T ss_pred EEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEEEEe--CCC-ccCCCCEEEEEee
Confidence 55789999999999999999987 4578899999999997654 333 7999999998864
No 66
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=95.98 E-value=0.015 Score=60.23 Aligned_cols=60 Identities=18% Similarity=0.239 Sum_probs=51.3
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe----CCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccC
Q 008996 135 IARWLKKEGDKVSPGEVLCEVET----DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evEt----dKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
+.+..++.||.|++||+|++|+. .+...+|.||.+|+|..+. ... .|..|+.|+.|....
T Consensus 277 ~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~~--~~~-~V~~Gd~l~~ia~~~ 340 (354)
T 3cdx_A 277 LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFGA--GPG-RVTRGDAVAVVMEDY 340 (354)
T ss_dssp EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEEE--CSS-EECTTCEEEEEEEEC
T ss_pred EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEEe--CCC-ccCCCCEEEEEeeec
Confidence 67888999999999999999997 4888999999999997664 554 789999999886543
No 67
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.37 E-value=0.0064 Score=51.50 Aligned_cols=46 Identities=17% Similarity=0.264 Sum_probs=41.1
Q ss_pred CCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 149 GEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 149 gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
|..+|.+|..+-...|.||.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd-~V~~Gq~L~~le~ 50 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGG-HVEAGSSYAEMEV 50 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTE-EECTTCEEEEEEE
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcC-EECCCCEEEEEEe
Confidence 556688888888889999999999999999997 9999999999853
No 68
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=94.04 E-value=0.13 Score=52.72 Aligned_cols=59 Identities=17% Similarity=0.181 Sum_probs=48.0
Q ss_pred EEEEEEcCCCCeecCCCeEEEEEe----CCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 134 NIARWLKKEGDKVSPGEVLCEVET----DKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 134 ~i~~w~v~~Gd~V~~gd~l~evEt----dKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
-+....++.||.|++||+|+++-. .....+|.||.+|+|.-.. ..- .|..|+.|+.+..
T Consensus 266 G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~~~~--~~p-~V~~Gd~l~~ia~ 328 (332)
T 2qj8_A 266 GIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIR--SAM-YVQGNEEVAILAR 328 (332)
T ss_dssp EEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEEEEE--CSE-EECTTCEEEEEEE
T ss_pred eEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEEEEe--CCC-eeCCCCEEEEEee
Confidence 355688899999999999999965 4677899999999996554 343 7899999998754
No 69
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=94.00 E-value=0.058 Score=42.11 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=29.0
Q ss_pred EEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 163 EMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 163 ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
+|.||.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 1 ~v~a~~~G~v~~~~v~~G~-~V~~G~~l~~i~~ 32 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGD-QIEKGQEVAILES 32 (72)
T ss_dssp CEECCSSEEEEEECCCTTC-EECTTCEEEEEEE
T ss_pred CEECcccEEEEEEEcCCcC-EECCCCEEEEEEC
Confidence 3789999999999999997 8999999999854
No 70
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=93.96 E-value=0.063 Score=42.51 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=30.2
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
..|.||.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 9 ~~v~a~~~G~v~~~~v~~G~-~V~~G~~L~~l~~ 41 (77)
T 1dcz_A 9 GEIPAPLAGTVSKILVKEGD-TVKAGQTVLVLEA 41 (77)
T ss_dssp SEEEBSSSCEEEEECCCTTC-EECTTSEEEEEEE
T ss_pred eEEECCCCEEEEEEEcCCcC-EEcCCCEEEEEEc
Confidence 57899999999999999997 8999999999854
No 71
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=93.70 E-value=0.088 Score=41.12 Aligned_cols=33 Identities=12% Similarity=0.240 Sum_probs=29.9
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
..|.||.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~-~V~~G~~l~~i~~ 38 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGD-RVRVGQGLLVLEA 38 (74)
T ss_dssp CEEECSSCEEEEEECCCTTC-EECTTCEEEEEEE
T ss_pred eEEecCCCEEEEEEEcCCCC-EeCCCCEEEEEec
Confidence 46889999999999999997 8999999999853
No 72
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=93.10 E-value=0.098 Score=44.94 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.4
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
+.|.|+.+|+|.++.+++|+ .|+.|++|+.+..
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~-~V~~Gq~L~~ld~ 34 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGD-KVKKGQTLFIIEQ 34 (116)
T ss_dssp EEECCSSCEEEEEECSCTTS-EECTTCEEEEEEC
T ss_pred eEEeCcCCEEEEEEECCCcC-EECCCCEEEEECH
Confidence 67899999999999999998 9999999999854
No 73
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=92.52 E-value=0.092 Score=42.81 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=30.1
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
..|.||.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd-~V~~G~~l~~ie~ 38 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGG-HVEAGSSYAEMEV 38 (84)
T ss_dssp TEECCSSSCCEEEESSCTTE-EECTTCEEEEEEC
T ss_pred ceEECCCCEEEEEEECCCCC-EECCCCEEEEEEe
Confidence 37899999999999999997 9999999999853
No 74
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=90.98 E-value=0.22 Score=46.10 Aligned_cols=58 Identities=24% Similarity=0.332 Sum_probs=49.2
Q ss_pred CeeEEEEEEcCCCCeecC----CCeEEEEEeCCeeEEEecCcCeEEEEE-------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSP----GEVLCEVETDKATVEMECMEEGYLAKI------------------------------- 175 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~----gd~l~evEtdKa~~ev~ap~~G~l~ki------------------------------- 175 (547)
-.|+|.... +..|.|-. |+-++...++ ..+.||.+|+|..+
T Consensus 19 ~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~ 94 (161)
T 1f3z_A 19 LSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 94 (161)
T ss_dssp SCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTT
T ss_pred CCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCC
Confidence 458888865 78888766 8999988876 47899999999988
Q ss_pred ----eeCCCCeeeeCCCEEEEE
Q 008996 176 ----VKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 176 ----~~~~G~~~v~vG~~l~~i 193 (547)
++++|+ .|+.|++|+.+
T Consensus 95 gF~~~V~~Gd-~V~~G~~L~~~ 115 (161)
T 1f3z_A 95 GFKRIAEEGQ-RVKVGDTVIEF 115 (161)
T ss_dssp TEEECSCTTC-EECTTCEEEEE
T ss_pred ccEEEEeCcC-EECCCCEEEEE
Confidence 889997 89999999987
No 75
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=90.63 E-value=0.24 Score=48.67 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=38.3
Q ss_pred CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 141 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 141 ~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
+.|+.-..=..-++|+.. -.+.|.++.+|+|.++++++|+ .|+.|++|+.+.
T Consensus 3 ~~~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~-~V~kGq~L~~ld 54 (277)
T 2f1m_A 3 KTEPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEGS-DIEAGVSLYQID 54 (277)
T ss_dssp -------CCEEEEEEECS-EEEEECCSSCEEEEEECSCTTC-EECTTSCSEEEC
T ss_pred eeeccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCCC-EecCCCEEEEEC
Confidence 344444444556778765 4678999999999999999997 999999999983
No 76
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=89.68 E-value=0.32 Score=38.79 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=29.7
Q ss_pred EEEecCcCeEEEEE-------eeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKI-------VKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki-------~~~~G~~~v~vG~~l~~i~~ 195 (547)
..|.||..|+|.++ ++++|+ .|+.|++|+.+..
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~-~V~~G~~l~~ie~ 44 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQ-KVNVGDTLCIVEA 44 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTC-EECTTCEEEEEEE
T ss_pred eEEEcCCCeEEEEecccCcccccCCcC-EECCCCEEEEEEe
Confidence 46899999999998 899997 9999999999854
No 77
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=89.68 E-value=0.28 Score=38.85 Aligned_cols=27 Identities=33% Similarity=0.576 Sum_probs=24.9
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEe
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
..|+|.++++++||.|..|++|++|+|
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (77)
T 2l5t_A 51 VRGKIVKILYREGQVVPVGSTLLQIDT 77 (77)
T ss_dssp CCEEEEEECCCTTCEECSCSEEEEEEC
T ss_pred CCEEEEEEEeCCcCEECCCCEEEEEEC
Confidence 369999999999999999999999975
No 78
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=89.53 E-value=0.27 Score=46.66 Aligned_cols=31 Identities=16% Similarity=0.368 Sum_probs=25.3
Q ss_pred EEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEE
Q 008996 137 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 173 (547)
Q Consensus 137 ~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ 173 (547)
..+|++|+.|++||.||+-. .|-+..+|+|.
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~ 52 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIV 52 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEE
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEE
Confidence 67899999999999999753 66677777764
No 79
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=89.40 E-value=0.25 Score=45.29 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=48.4
Q ss_pred CeeEEEEEEcCCCCeecC----CCeEEEEEeCCeeEEEecCcCeEEEEE-------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSP----GEVLCEVETDKATVEMECMEEGYLAKI------------------------------- 175 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~----gd~l~evEtdKa~~ev~ap~~G~l~ki------------------------------- 175 (547)
-.|+|... -++.|.|-. |+-++...++ ..+.||.+|+|..+
T Consensus 14 ~~G~vv~l-~~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~ 89 (154)
T 2gpr_A 14 CDGTIITL-DEVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGN 89 (154)
T ss_dssp SSEEEECG-GGSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTC
T ss_pred CCeEEEEe-eECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCC
Confidence 35888876 477888766 8999988876 48999999999974
Q ss_pred ----eeCCCCeeeeCCCEEEEE
Q 008996 176 ----VKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 176 ----~~~~G~~~v~vG~~l~~i 193 (547)
++++|+ .|+.|++|+.+
T Consensus 90 gF~~~V~~Gd-~V~~G~~L~~~ 110 (154)
T 2gpr_A 90 GFESFVTQDQ-EVNAGDKLVTV 110 (154)
T ss_dssp SEEECCCTTC-EECTTCEEEEE
T ss_pred ceEEEEcCCC-EEcCCCEEEEE
Confidence 889997 89999999987
No 80
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=89.05 E-value=0.31 Score=40.87 Aligned_cols=34 Identities=15% Similarity=0.278 Sum_probs=30.3
Q ss_pred eEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 161 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 161 ~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
...|.||.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 14 ~~~v~a~~~G~v~~~~v~~Gd-~V~~Gq~L~~ie~ 47 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAGD-KVKAGDSLMVMIA 47 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTTE-EECSSCEEEEEES
T ss_pred ceEEecCCCEEEEEEECCCCC-EECCCCEEEEEEc
Confidence 346789999999999999997 9999999999854
No 81
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=88.84 E-value=0.2 Score=41.75 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=30.3
Q ss_pred eEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 161 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 161 ~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
...|.||.+|+|.++.+++|+ .|+.|++|+.+..
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd-~V~~Gq~L~~ie~ 58 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGD-AVAEGQEICVIEA 58 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTC-CCCTTCCCEEEEC
T ss_pred ceEEECCCCEEEEEEECCCCC-EEcCCCEEEEEec
Confidence 346889999999999999997 8999999999843
No 82
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=88.68 E-value=0.33 Score=49.52 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=44.5
Q ss_pred cCCCCeecCCCeEEEEEeC-CeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 140 KKEGDKVSPGEVLCEVETD-KATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 140 v~~Gd~V~~gd~l~evEtd-Ka~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
++.|+....-..-+.|+.+ .-.+.|.++.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 35 v~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~-~V~kGq~L~~ld~ 90 (359)
T 3lnn_A 35 ATRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGD-EVKAGDVLFTIDS 90 (359)
T ss_dssp CEEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTC-EECTTCEEEEEEC
T ss_pred eeecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCC-EEcCCCEEEEECh
Confidence 3445544455566788875 67889999999999999999998 9999999999843
No 83
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=88.56 E-value=0.29 Score=45.29 Aligned_cols=58 Identities=14% Similarity=0.223 Sum_probs=49.0
Q ss_pred CeeEEEEEEcCCCCeecC----CCeEEEEEeCCeeEEEecCcCeEEEEE-------------------------------
Q 008996 131 QEGNIARWLKKEGDKVSP----GEVLCEVETDKATVEMECMEEGYLAKI------------------------------- 175 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~----gd~l~evEtdKa~~ev~ap~~G~l~ki------------------------------- 175 (547)
-.|+|... .+..|.|-. |+-++...++ ..+.||.+|+|..+
T Consensus 19 ~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~ 94 (162)
T 1ax3_A 19 ITGEIHPI-TDVPDQVFSGKMMGDGFAILPSE---GIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGE 94 (162)
T ss_dssp CSEEEEEG-GGSSSHHHHTCTTSEEEEEEECS---SEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTT
T ss_pred CceEEEEe-EECCCccccccceeceEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCC
Confidence 46899886 778888766 8999977763 47899999999988
Q ss_pred ----eeCCCCeeeeCCCEEEEE
Q 008996 176 ----VKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 176 ----~~~~G~~~v~vG~~l~~i 193 (547)
++++|+ .|+.|++|+.+
T Consensus 95 gF~~~V~~Gd-~V~~G~~L~~~ 115 (162)
T 1ax3_A 95 GFTSFVSEGD-RVEPGQKLLEV 115 (162)
T ss_dssp TEEESCCCCS-EECSEEEEEEE
T ss_pred ccEEEEeCCC-EEcCCCEEEEE
Confidence 888998 89999999887
No 84
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=87.51 E-value=0.55 Score=47.42 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=41.0
Q ss_pred cCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 140 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 140 v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
++.|+.-..=..-+.|+.. -.+.|.++.+|+|.++++++|+ .|+.|++|+.+.
T Consensus 11 v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~-~V~kG~~L~~ld 63 (341)
T 3fpp_A 11 VRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGD-KVKKDQLLGVID 63 (341)
T ss_dssp --CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTC-EECTTCEEEEEC
T ss_pred EEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCC-EECCCCEEEEEC
Confidence 4455544444455677766 4668999999999999999997 999999999984
No 85
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=86.62 E-value=0.45 Score=37.82 Aligned_cols=26 Identities=42% Similarity=0.659 Sum_probs=24.4
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEe
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
.|+|.++++++||.|..|++|++|+.
T Consensus 52 ~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 52 DGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp CEEEEEESSCTTCEECTTCEEEEECC
T ss_pred CEEEEEEEcCCcCEECCCCEEEEEec
Confidence 58999999999999999999999975
No 86
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=86.53 E-value=0.93 Score=41.83 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=40.2
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEE-EecCcCeEEEEEe
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKATVE-MECMEEGYLAKIV 176 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~e-v~ap~~G~l~ki~ 176 (547)
-||..+-..+.+||.|.+||.|+-|.|-|-++- +.||++|+|.=+.
T Consensus 107 aeG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~ 153 (169)
T 3d4r_A 107 AEGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMN 153 (169)
T ss_dssp ECSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred eCceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEE
Confidence 356666778999999999999999999999886 8999999997664
No 87
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=85.44 E-value=0.49 Score=38.54 Aligned_cols=29 Identities=34% Similarity=0.585 Sum_probs=25.9
Q ss_pred CeeEEEEEEcCCCC-eecCCCeEEEEEeCC
Q 008996 131 QEGNIARWLKKEGD-KVSPGEVLCEVETDK 159 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd-~V~~gd~l~evEtdK 159 (547)
..|+|.++++++|| .|..|++|++|+...
T Consensus 55 ~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~ 84 (87)
T 3crk_C 55 EEGYLAKILVPEGTRDVPLGTPLCIIVEKE 84 (87)
T ss_dssp SCEEEEEESSCTTCCCEETTCEEEEEESSS
T ss_pred cCcEEEEEEECCCCeEECCCCEEEEEEccc
Confidence 36999999999999 899999999998643
No 88
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=85.39 E-value=0.45 Score=37.85 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=28.8
Q ss_pred eEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 119 QEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 119 ~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
.+|.-| ..|+|.++++++||.|..|++|++|+..
T Consensus 44 ~~i~Ap------~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 44 MEVPAP------FAGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp EEEEBS------SCEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred EEEeCC------CCEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 456555 3589999999999999999999999864
No 89
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=85.21 E-value=0.75 Score=38.15 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=25.5
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
..|+|.++++++||.|..|++|++|+..
T Consensus 54 ~~G~V~~i~v~~G~~V~~G~~l~~i~~~ 81 (93)
T 1k8m_A 54 YDGVIKKLYYNLDDIAYVGKPLVDIETE 81 (93)
T ss_dssp SCEEEEEECCCSSCEECTTSEEEEEECS
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecC
Confidence 4699999999999999999999999863
No 90
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=84.35 E-value=0.66 Score=36.84 Aligned_cols=27 Identities=30% Similarity=0.454 Sum_probs=24.7
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
.|+|.++++++||.|..|++|++|+.+
T Consensus 49 ~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 49 AGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp SSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred CEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 589999999999999999999999753
No 91
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=83.75 E-value=0.86 Score=47.18 Aligned_cols=31 Identities=16% Similarity=0.368 Sum_probs=24.4
Q ss_pred EEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEE
Q 008996 137 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 173 (547)
Q Consensus 137 ~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ 173 (547)
..+|++||.|++||.||+-. .|-|..+|+|.
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~ 92 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIV 92 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEE
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEE
Confidence 67899999999999999853 55566666653
No 92
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=83.42 E-value=0.93 Score=47.54 Aligned_cols=54 Identities=11% Similarity=0.156 Sum_probs=41.7
Q ss_pred cCCCCeecCCCeEEEEEeC-CeeEEEecCcCeEEEEEee-CCCCeeeeCCCEEEEEe
Q 008996 140 KKEGDKVSPGEVLCEVETD-KATVEMECMEEGYLAKIVK-GDGSKEIKVGEVIAITV 194 (547)
Q Consensus 140 v~~Gd~V~~gd~l~evEtd-Ka~~ev~ap~~G~l~ki~~-~~G~~~v~vG~~l~~i~ 194 (547)
++.|+.-..=...+.|+.| .-...|.++.+|+|.++.+ ++|+ .|+.|++|+.+.
T Consensus 99 v~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd-~VkkGq~L~~ld 154 (413)
T 3ne5_B 99 VTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGD-KVQKGTPLLDLT 154 (413)
T ss_dssp CEEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTC-EECTTCEEEEEE
T ss_pred EEEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCC-EEcCCCEEEEEc
Confidence 3444444444556677653 5568899999999999998 9997 999999999985
No 93
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=82.81 E-value=0.84 Score=46.98 Aligned_cols=52 Identities=15% Similarity=0.134 Sum_probs=37.9
Q ss_pred CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEe
Q 008996 141 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITV 194 (547)
Q Consensus 141 ~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~ 194 (547)
+.|+....-..-+.|+.. -.+.|.++.+|+|.++++++|+ .|+.|++|+.+.
T Consensus 24 ~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd-~V~kGq~L~~ld 75 (369)
T 1vf7_A 24 EAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGS-DVKAGQQLYQID 75 (369)
T ss_dssp -----CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSE-EECTTSEEEEEC
T ss_pred EeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCC-EEcCCCEEEEEC
Confidence 344433333445667764 4578999999999999999997 999999999983
No 94
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=81.72 E-value=0.92 Score=36.12 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=26.1
Q ss_pred cCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 166 CMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 166 ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
++..|.|.++++++|+ .|+.|++|+.+..
T Consensus 12 ~~~~G~i~~~~v~~Gd-~V~~G~~l~~ie~ 40 (81)
T 1gjx_A 12 GHENVDIIAVEVNVGD-TIAVDDTLITLET 40 (81)
T ss_dssp SCSSEEEEEECCCSSC-BCCSSCCCEEEEC
T ss_pred CCCcEEEEEEEcCCCC-EECCCCEEEEEEe
Confidence 5689999999999998 8999999999844
No 95
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=80.74 E-value=1.7 Score=40.97 Aligned_cols=42 Identities=24% Similarity=0.307 Sum_probs=35.7
Q ss_pred EEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCC
Q 008996 137 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDG 180 (547)
Q Consensus 137 ~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G 180 (547)
..+|++||.|++||.||+. |..+..|-+..+|+|.=--.-+|
T Consensus 63 ~L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G 104 (190)
T 2auk_A 63 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDG 104 (190)
T ss_dssp EESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBT
T ss_pred EEEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCC
Confidence 5699999999999999977 89999999999999964443444
No 96
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.66 E-value=1.7 Score=36.38 Aligned_cols=28 Identities=25% Similarity=0.519 Sum_probs=24.9
Q ss_pred cCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 168 EEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 168 ~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
.+|+|.++++++|+ .|+.|++|+.+...
T Consensus 20 ~~G~i~~~~v~~Gd-~V~~G~~L~~ie~~ 47 (98)
T 2dnc_A 20 EEGNIVKWLKKEGE-AVSAGDALCEIETD 47 (98)
T ss_dssp SEECEEEESSCTTC-EECTTSEEEEEECS
T ss_pred ccEEEEEEEcCCCC-EeCCCCEEEEEEcc
Confidence 57999999999998 89999999998543
No 97
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=79.94 E-value=0.76 Score=37.18 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=28.8
Q ss_pred ceEEecCCCCCCCCeeEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 118 HQEIGMPSLSPTMQEGNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 118 ~~~i~mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
..+|.-| ..|+|.++++++||.|..|++|++|+.+
T Consensus 39 ~~~i~Ap------~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 39 SMEVPAP------FAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp EEEEECS------SCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred EEEEECC------CCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 3456655 3578999999999999999999999864
No 98
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=79.50 E-value=1.2 Score=37.99 Aligned_cols=27 Identities=30% Similarity=0.487 Sum_probs=24.5
Q ss_pred cCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 168 EEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 168 ~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 20 ~~G~v~~~~v~~Gd-~V~~G~~L~~iE~ 46 (108)
T 2dne_A 20 QAGTIARWEKKEGD-KINEGDLIAEVET 46 (108)
T ss_dssp CEEEEEECSSCTTC-EECTTSEEEEEEC
T ss_pred ccEEEEEEEcCCCC-EecCCCEEEEEEc
Confidence 57999999999998 8999999999854
No 99
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=79.30 E-value=1.3 Score=39.27 Aligned_cols=28 Identities=36% Similarity=0.591 Sum_probs=25.3
Q ss_pred CeeEEEEEEcCCCC-eecCCCeEEEEEeC
Q 008996 131 QEGNIARWLKKEGD-KVSPGEVLCEVETD 158 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd-~V~~gd~l~evEtd 158 (547)
..|+|.++++++|| .|..|++|++|+..
T Consensus 77 ~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~ 105 (128)
T 1y8o_B 77 EEGYLAKILVPEGTRDVPLGTPLCIIVEK 105 (128)
T ss_dssp SCEEEEEESSCTTCCSEETTCEEEEEESS
T ss_pred CCeEEEEEEeCCCCeeecCCCEEEEEecC
Confidence 46999999999998 89999999999864
No 100
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=74.92 E-value=96 Score=33.36 Aligned_cols=33 Identities=6% Similarity=0.145 Sum_probs=29.3
Q ss_pred EEeEEEEEEeecccccchHHHHHHHHHHHHhhc
Q 008996 508 FSSFMSVTLSCDHRVIDGAIGAEWLKAFKGYIE 540 (547)
Q Consensus 508 ir~~m~ltlt~DHRviDGa~aa~FL~~lk~~LE 540 (547)
.+--++|++.|+-...|...+..||+.+++.|-
T Consensus 483 f~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L~ 515 (519)
T 3fot_A 483 WRDASTLNIIYNDANYTEAEVQKYLQSIVEFML 515 (519)
T ss_dssp ETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 344589999999999999999999999999874
No 101
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=74.55 E-value=2.7 Score=47.11 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=31.2
Q ss_pred eEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 161 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 161 ~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
...|.||..|+|.++++++|+ .|+.|++|+++...
T Consensus 612 ~~~v~ap~~G~v~~~~v~~Gd-~V~~g~~l~~iEam 646 (681)
T 3n6r_A 612 SKMLLCPMPGLIVKVDVEVGQ-EVQEGQALCTIEAM 646 (681)
T ss_dssp CSEEECCSCEEEEEECCCTTC-EECTTCEEEEEECS
T ss_pred CCeEECCCcEEEEEEEeCCCC-EEcCCCEEEEEEec
Confidence 456999999999999999998 89999999998543
No 102
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=74.51 E-value=1.1 Score=42.60 Aligned_cols=45 Identities=29% Similarity=0.413 Sum_probs=33.4
Q ss_pred cCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEE--------------------------EE--eeCCCCeeeeCCCEEE
Q 008996 140 KKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA--------------------------KI--VKGDGSKEIKVGEVIA 191 (547)
Q Consensus 140 v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~--------------------------ki--~~~~G~~~v~vG~~l~ 191 (547)
|++|+.|+.||+|+ -|.+ |-|..+|+|. .+ ++++|+ .|+.|++|+
T Consensus 85 V~dG~~V~~GdvLA---Kd~A---IiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd-~V~~Ge~L~ 157 (193)
T 2xha_A 85 LRVGTKVKQGLPLS---KNEE---YICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGK-EVKQGEMLA 157 (193)
T ss_dssp CCTTCEECTTSBSS---TTSC---SBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTC-EECTTCEEE
T ss_pred cCCCCEEcCCCEEe---cCCe---EEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCC-EECCCCCcc
Confidence 68999999999998 3333 3466677664 12 788897 899999885
No 103
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=73.86 E-value=0.79 Score=46.72 Aligned_cols=53 Identities=21% Similarity=0.254 Sum_probs=41.5
Q ss_pred CCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 141 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 141 ~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
+.|+.-..=..-++|+.. -.+.|.++.+|+|.++++++|+ .|+.|++|+.+..
T Consensus 13 ~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~-~V~~Gq~L~~ld~ 65 (369)
T 4dk0_A 13 KRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQ-QVKKGDLLAEIDS 65 (369)
T ss_dssp CEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTS-CCCSSCCCEECCC
T ss_pred EecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCC-EECCCCEEEEEcC
Confidence 444444455556677754 4568999999999999999998 9999999999843
No 104
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=72.01 E-value=3.7 Score=42.22 Aligned_cols=52 Identities=15% Similarity=0.070 Sum_probs=40.3
Q ss_pred EEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccC
Q 008996 138 WLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 138 w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
-.++.|+.|++||+|+++ .| .+|.+|.+|++.- ... - .|..|+.++.+....
T Consensus 279 ~~~~~g~~V~~G~~La~i-~d---~~v~a~~dG~~i~--~p~-p-~V~~G~~~~~i~~~~ 330 (350)
T 2bco_A 279 DNVENFTSFVHGEVFGHD-GD---KPLMAKNDNEAIV--FPN-R-HVAIGQRAALMVCEV 330 (350)
T ss_dssp TTCCBTEECCTTCEEEEE-TT---EEEECSSSSCEEE--SCC-T-TCCTTSEEEEEEEEC
T ss_pred ccccCCCEeCCCCEEEEE-CC---EEEEeCCCCEEEE--ecC-C-CCCCCcEEEEEEEEc
Confidence 346889999999999999 44 6889999999753 233 3 699999988775543
No 105
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=70.90 E-value=0.59 Score=37.35 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=24.2
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEe
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
..|+|.++++++||.|..|++|++|+.
T Consensus 52 ~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 52 ADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp SBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 468899999999999999999998864
No 106
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=67.84 E-value=3.4 Score=37.71 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=27.1
Q ss_pred EEecCCCCCC--CCeeEEEEEEcCCCCeecCCCeEEEEEe
Q 008996 120 EIGMPSLSPT--MQEGNIARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 120 ~i~mP~lg~~--~~eg~i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
++.+ -+|.+ .-+|+=.+.+|++||+|++||+|+++.-
T Consensus 74 evLi-HiGidTv~l~G~gF~~~V~~Gd~V~~G~~L~~~d~ 112 (154)
T 2gpr_A 74 EILL-HIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVDL 112 (154)
T ss_dssp EEEE-ECSSSGGGGTTCSEEECCCTTCEECTTCEEEEECH
T ss_pred EEEE-EECcchhhcCCCceEEEEcCCCEEcCCCEEEEECH
Confidence 5555 44433 2345667889999999999999999975
No 107
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=66.40 E-value=5 Score=47.74 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=31.3
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccC
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
..|.||..|.|.++++++|+ .|+.|++|+++....
T Consensus 1078 ~~v~ap~~G~v~~~~v~~Gd-~V~~G~~l~~ieamK 1112 (1150)
T 3hbl_A 1078 SHIGAQMPGSVTEVKVSVGE-TVKANQPLLITEAMK 1112 (1150)
T ss_dssp SEEECSSSEEEEEECCCTTC-EECTTCEEEEEESSS
T ss_pred ceeecCceEEEEEEEeCCCC-EECCCCEEEEEEecc
Confidence 47999999999999999998 899999999985443
No 108
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=66.28 E-value=4.9 Score=48.16 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=31.8
Q ss_pred eEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccC
Q 008996 161 TVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 161 ~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
...|.||..|+|.++++++|| .|+.||+|+++..+.
T Consensus 1167 ~~~v~ap~~G~v~~~~v~~Gd-~V~~g~~l~~iEamK 1202 (1236)
T 3va7_A 1167 AELLYSEYTGRFWKPVAAVGD-HVEAGDGVIIIEAMK 1202 (1236)
T ss_dssp CEEEECSSCEEEEEESSCTTC-EECSSCEEEEEEETT
T ss_pred CcEEeCCCcEEEEEEEcCCCC-EECCCCEEEEEEecC
Confidence 456999999999999999998 899999999985543
No 109
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=66.08 E-value=9.8 Score=35.65 Aligned_cols=17 Identities=18% Similarity=0.479 Sum_probs=15.3
Q ss_pred eeCCCCeeeeCCCEEEEE
Q 008996 176 VKGDGSKEIKVGEVIAIT 193 (547)
Q Consensus 176 ~~~~G~~~v~vG~~l~~i 193 (547)
++++|+ .|+.|++|+.+
T Consensus 121 ~V~~Gd-~Vk~Gd~L~~f 137 (183)
T 3our_B 121 IAEEGQ-TVKAGDTVIEF 137 (183)
T ss_dssp CSCTTC-EECTTCEEEEE
T ss_pred EEeCcC-EEcCCCEEEEE
Confidence 889997 89999999886
No 110
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=61.83 E-value=4.6 Score=45.61 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=30.7
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
..|.||..|+|.++.+++|+ .|+.|++|+++...
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd-~V~~Gq~L~~iEam 683 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGA-KVAKGQPLCVLSAM 683 (718)
T ss_dssp SCEECSSCEEEEEECSCTTC-CBCTTCCCEEEESS
T ss_pred ceEeCCCCeEEEEEEeCCCC-eeCCCCEEEEEecc
Confidence 46999999999999999998 89999999998543
No 111
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=61.53 E-value=5.9 Score=47.41 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=30.2
Q ss_pred EEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEE
Q 008996 137 RWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLA 173 (547)
Q Consensus 137 ~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ 173 (547)
..+|++||.|++||.||+. |--+..|-+..+|+|.
T Consensus 1002 ~l~v~~g~~V~~g~~ia~w--Dp~~~piise~~G~v~ 1036 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVR 1036 (1407)
T ss_dssp EESSCSSCEECTTCEEEEC--CSSCCCEECSSCEEEE
T ss_pred EEEEcCCCEecCCCEEEEE--ecCceeEEeccceEEE
Confidence 5789999999999999987 7778888888888774
No 112
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=60.01 E-value=4.6 Score=37.87 Aligned_cols=27 Identities=22% Similarity=0.415 Sum_probs=23.4
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
+|+--+++|++||+|++||+|+++.-+
T Consensus 114 ~G~gF~~~V~~Gd~Vk~Gd~L~~fD~~ 140 (183)
T 3our_B 114 KGEGFTRIAEEGQTVKAGDTVIEFDLA 140 (183)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECHH
T ss_pred CCccceEEEeCcCEEcCCCEEEEECHH
Confidence 366679999999999999999999654
No 113
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=57.35 E-value=2.2 Score=45.24 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=0.0
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeCCe
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETDKA 160 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa 160 (547)
.+|+|.++++++||.|..||+|++|+.+..
T Consensus 52 ~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~ 81 (428)
T 3dva_I 52 VKGKVLEILVPEGTVATVGQTLITLDAPGY 81 (428)
T ss_dssp ------------------------------
T ss_pred CCeEEEEEEeCCCCEeCCCCEEEEEecCCc
Confidence 579999999999999999999999987543
No 114
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=56.47 E-value=7.6 Score=46.27 Aligned_cols=33 Identities=12% Similarity=0.340 Sum_probs=27.4
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
..|.||..|+|.++.+++|+ .|+.|++|+++..
T Consensus 1096 ~~v~ap~~G~v~~~~v~~Gd-~V~~G~~l~~iEa 1128 (1165)
T 2qf7_A 1096 AHVGAPMPGVISRVFVSSGQ-AVNAGDVLVSIEA 1128 (1165)
T ss_dssp TEEECSSCEEEEEECCSSCC-CC---CEEEEEEC
T ss_pred ceeeCCCCeEEEEEEcCCcC-EeCCCCEEEEEEc
Confidence 57999999999999999998 8999999999854
No 115
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=55.64 E-value=15 Score=39.03 Aligned_cols=43 Identities=21% Similarity=0.360 Sum_probs=36.6
Q ss_pred EEeCCeeEEEecCcCeEEEEE-------------------------------eeCCCCeeeeCCCEEEEEeccCC
Q 008996 155 VETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVEEEE 198 (547)
Q Consensus 155 vEtdKa~~ev~ap~~G~l~ki-------------------------------~~~~G~~~v~vG~~l~~i~~~~~ 198 (547)
+...+.+.+|.|+.+|+|..| .++.|+ .|+.|++|++|..+.+
T Consensus 329 ~~~~~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~~d~~~Gi~~~~k~g~-~v~~g~~l~~i~~~~~ 402 (433)
T 1brw_A 329 LPKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIGD-RVQKGEALATIHSNRP 402 (433)
T ss_dssp SCCCSEEEEEECSSSEEEEEECHHHHHHHHHHHTTSCSSTTCCCCTTCEEEESCCTTC-EECTTCEEEEEEESSS
T ss_pred CCCCCeEEEEecCCCeEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCC-EECCCCeEEEEEcCCc
Confidence 456788899999999999887 788897 8999999999976544
No 116
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=54.94 E-value=2.5 Score=47.31 Aligned_cols=33 Identities=9% Similarity=0.288 Sum_probs=0.0
Q ss_pred EEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 162 VEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 162 ~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
..|.||..|+|.++++++|+ .|+.|++|+++..
T Consensus 603 ~~v~ap~~G~v~~~~v~~Gd-~V~~g~~l~~iEa 635 (675)
T 3u9t_A 603 GGLSAPMNGSIVRVLVEPGQ-TVEAGATLVVLEA 635 (675)
T ss_dssp ----------------------------------
T ss_pred CeEECCCCEEEEEEEeCCCC-EEcCCCEEEEEEe
Confidence 46899999999999999998 8999999998743
No 117
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=53.82 E-value=16 Score=38.81 Aligned_cols=39 Identities=18% Similarity=0.361 Sum_probs=33.9
Q ss_pred EeCCeeEEEecCcCeEEEEE-------------------------------eeCCCCeeeeCCCEEEEEec
Q 008996 156 ETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 156 EtdKa~~ev~ap~~G~l~ki-------------------------------~~~~G~~~v~vG~~l~~i~~ 195 (547)
...+...+|.|+.+|+|..| +++.|+ .|..|++|++|.+
T Consensus 333 ~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lGagr~~~~d~id~~~Gi~l~~~~G~-~V~~g~~l~~i~~ 402 (436)
T 3h5q_A 333 PQAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGD-KVEEGESLLTIHS 402 (436)
T ss_dssp CCCSEEEEEECSSCEEEEEECHHHHHHHHHHTTTSCSSTTCCCCTTCEEEESCCTTC-EECTTSEEEEEEE
T ss_pred CCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCCCCceEEecCCcC-EeCCCCeEEEEeC
Confidence 34578899999999999988 678997 8999999999983
No 118
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=53.06 E-value=15 Score=38.93 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=35.0
Q ss_pred EEeCCeeEEEecCcCeEEEEE-------------------------------eeCCCCeeeeCCCEEEEEeccCC
Q 008996 155 VETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVEEEE 198 (547)
Q Consensus 155 vEtdKa~~ev~ap~~G~l~ki-------------------------------~~~~G~~~v~vG~~l~~i~~~~~ 198 (547)
+...+ +.+|.|+.+|||..| .++.|+ .|..|++|++|..+.+
T Consensus 322 ~~~a~-~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~-~v~~g~~l~~i~~~~~ 394 (423)
T 2dsj_A 322 LPLAE-EHPLRAEREGVVREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPGD-RVERGEALALVYHRRR 394 (423)
T ss_dssp SCCCE-EEEEECSSCEEEEEECHHHHHHHHHHHTSSCSSTTCCCCTTCEEEESCCTTC-EECTTSEEEEEEECSS
T ss_pred CCCCC-eEEEecCCCeEEEEechHHHHHHHHHcCCCcCcCCCCCCcCcCeeeeccCCC-EeCCCCeEEEEEeCCc
Confidence 34567 889999999999877 788897 8999999999976544
No 119
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=52.81 E-value=9 Score=38.32 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=20.7
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe
Q 008996 135 IARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
-++|++++|+.|++||+|++|+-
T Consensus 72 ~v~~~~~dG~~v~~g~~v~~i~G 94 (284)
T 1qpo_A 72 RVLDRVEDGARVPPGEALMTLEA 94 (284)
T ss_dssp EEEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEEcCCCCEecCCcEEEEEEE
Confidence 45899999999999999999984
No 120
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=50.56 E-value=10 Score=37.54 Aligned_cols=22 Identities=18% Similarity=0.323 Sum_probs=19.9
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 008996 136 ARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evEt 157 (547)
++|.+++|+.|.+||+|++|+-
T Consensus 60 v~~~~~eG~~v~~g~~~~~v~G 81 (273)
T 2b7n_A 60 CVQTIKDKERFKPKDALMEIRG 81 (273)
T ss_dssp EEEECCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEe
Confidence 4799999999999999999983
No 121
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=50.10 E-value=8.7 Score=38.44 Aligned_cols=22 Identities=27% Similarity=0.320 Sum_probs=20.2
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 008996 136 ARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evEt 157 (547)
++|++++||.|++||+|++|+-
T Consensus 74 v~~~~~dG~~v~~g~~v~~i~G 95 (286)
T 1x1o_A 74 FTPLVAEGARVAEGTEVARVRG 95 (286)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCCccCCCEEEEEEE
Confidence 5899999999999999999984
No 122
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=49.88 E-value=8.9 Score=38.46 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=20.1
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 008996 136 ARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evEt 157 (547)
++|++++|+.|++||+|++|+-
T Consensus 77 v~~~~~dG~~v~~g~~v~~i~G 98 (287)
T 3tqv_A 77 ITWLYSDAQKVPANARIFELKG 98 (287)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEEE
Confidence 4899999999999999999983
No 123
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=48.98 E-value=9.7 Score=38.43 Aligned_cols=22 Identities=27% Similarity=0.238 Sum_probs=20.2
Q ss_pred EEEEEcCCCCeecCCCeEEEEE
Q 008996 135 IARWLKKEGDKVSPGEVLCEVE 156 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evE 156 (547)
-++|++++|+.|++||+|++|+
T Consensus 85 ~v~~~~~dG~~v~~g~~v~~i~ 106 (300)
T 3l0g_A 85 KYEIHKKDGDITGKNSTLVSGE 106 (300)
T ss_dssp EEEECCCTTCEECSSCEEEEEE
T ss_pred EEEEEeCCCCEeeCCCEEEEEE
Confidence 3489999999999999999997
No 124
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=48.08 E-value=9.8 Score=38.35 Aligned_cols=22 Identities=32% Similarity=0.835 Sum_probs=19.8
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 008996 136 ARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evEt 157 (547)
++|++++|+.|.+||+|++|+-
T Consensus 88 v~~~~~dG~~v~~g~~l~~v~G 109 (298)
T 3gnn_A 88 VDWRHREGDRMSADSTVCELRG 109 (298)
T ss_dssp EEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEEe
Confidence 4899999999999999999973
No 125
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=47.53 E-value=8.1 Score=38.71 Aligned_cols=22 Identities=18% Similarity=0.391 Sum_probs=20.1
Q ss_pred EEEEcCCCCeecCCCeEEEEEe
Q 008996 136 ARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evEt 157 (547)
++|++++||.|++||+|++|+-
T Consensus 73 v~~~~~dG~~v~~g~~v~~i~G 94 (285)
T 1o4u_A 73 SKFNVEDGEYLEGTGVIGEIEG 94 (285)
T ss_dssp EEESCCTTCEEESCEEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEEE
Confidence 5899999999999999999973
No 126
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=47.04 E-value=10 Score=38.57 Aligned_cols=23 Identities=26% Similarity=0.768 Sum_probs=20.2
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe
Q 008996 135 IARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
-++|++++|+.|.+||+|++|+-
T Consensus 109 ~v~~~~~dG~~v~~g~~l~~v~G 131 (320)
T 3paj_A 109 SIEWHVQDGDTLTPNQTLCTLTG 131 (320)
T ss_dssp EEEESSCTTCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCEecCCCEEEEEEe
Confidence 45899999999999999999973
No 127
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=46.62 E-value=10 Score=34.74 Aligned_cols=26 Identities=23% Similarity=0.478 Sum_probs=22.1
Q ss_pred eeEEEEEEcCCCCeecCCCeEEEEEe
Q 008996 132 EGNIARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 132 eg~i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
.|+=.+.+|++||+|++||+|+++.-
T Consensus 92 ~G~gF~~~V~~Gd~V~~G~~L~~~d~ 117 (161)
T 1f3z_A 92 KGEGFKRIAEEGQRVKVGDTVIEFDL 117 (161)
T ss_dssp TTTTEEECSCTTCEECTTCEEEEECH
T ss_pred CCCccEEEEeCcCEECCCCEEEEECH
Confidence 34557889999999999999999964
No 128
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=46.20 E-value=11 Score=37.91 Aligned_cols=23 Identities=17% Similarity=0.482 Sum_probs=20.8
Q ss_pred EEEEEcCCCCeecCCCeEEEEEe
Q 008996 135 IARWLKKEGDKVSPGEVLCEVET 157 (547)
Q Consensus 135 i~~w~v~~Gd~V~~gd~l~evEt 157 (547)
-++|.+++|+.|.+||+|++|+-
T Consensus 86 ~v~~~~~dG~~v~~g~~~~~v~G 108 (296)
T 1qap_A 86 RLTWHVDDGDAIHANQTVFELQG 108 (296)
T ss_dssp EEEESCCTTCEECTTCEEEEEEE
T ss_pred EEEEEcCCCCEecCCCEEEEEEE
Confidence 35899999999999999999984
No 129
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=45.57 E-value=4.4 Score=39.30 Aligned_cols=28 Identities=29% Similarity=0.538 Sum_probs=0.0
Q ss_pred CcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 167 MEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 167 p~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
..+|+|.+|++++|| .|..|++|+.+..
T Consensus 15 m~eG~I~~w~vk~Gd-~V~~Gd~L~~iEt 42 (229)
T 1zy8_K 15 MEEGNIVKWLKKEGE-AVSAGDALCEIET 42 (229)
T ss_dssp -----------------------------
T ss_pred CCcEEEEEEecCCCC-EeCCCCEEEEEec
Confidence 467999999999998 8999999998743
No 130
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=44.52 E-value=15 Score=39.07 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=36.4
Q ss_pred EEeCCeeEEEecCcCeEEEEE-------------------------------eeCCCCeeeeCCCEEEEEeccCC
Q 008996 155 VETDKATVEMECMEEGYLAKI-------------------------------VKGDGSKEIKVGEVIAITVEEEE 198 (547)
Q Consensus 155 vEtdKa~~ev~ap~~G~l~ki-------------------------------~~~~G~~~v~vG~~l~~i~~~~~ 198 (547)
+...+.+.+|.|+.+|+|..| .++.|+ .|..|++|++|..+.+
T Consensus 334 ~~~a~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~-~v~~g~~l~~i~~~~~ 407 (440)
T 2tpt_A 334 LPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGD-QVDGQRPLAVIHAKDE 407 (440)
T ss_dssp SCCCSEEEEECCSSCEEEEEECHHHHHHHHHHHTTSCSSTTCCCCSSCEEESCCCTTC-EEBTTBCSEEEEESSH
T ss_pred CCCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCC-EECCCCeEEEEecCCH
Confidence 445788889999999999887 788897 8999999999976543
No 131
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=42.69 E-value=18 Score=37.29 Aligned_cols=34 Identities=9% Similarity=0.141 Sum_probs=29.6
Q ss_pred eeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 160 ATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 160 a~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
-..-|.||.+|.+. ..++.|+ .|+.||+|+.|.+
T Consensus 289 ~~~~v~A~~~Gl~~-~~v~lGd-~V~kG~~la~I~d 322 (368)
T 3fmc_A 289 NYRKFHAPKAGMVE-YLGKVGV-PMKATDPLVNLLR 322 (368)
T ss_dssp GEEEEECSSCEEEE-ECSCTTC-CBCTTCEEEEEEC
T ss_pred CcEEEecCCCEEEE-EeCCCCC-EeCCCCEEEEEEc
Confidence 34468999999996 7789997 9999999999976
No 132
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=41.98 E-value=13 Score=38.37 Aligned_cols=14 Identities=36% Similarity=0.427 Sum_probs=12.5
Q ss_pred cCCCCeecCCCeEE
Q 008996 140 KKEGDKVSPGEVLC 153 (547)
Q Consensus 140 v~~Gd~V~~gd~l~ 153 (547)
+++|+.|+.||+|+
T Consensus 125 v~~g~~v~~G~vla 138 (352)
T 2xhc_A 125 LRVGTKVKQGLPLS 138 (352)
T ss_dssp CCTTCEECTTCBSB
T ss_pred cCCCCEEccCcEEe
Confidence 68999999999877
No 133
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=41.34 E-value=12 Score=37.61 Aligned_cols=21 Identities=33% Similarity=0.637 Sum_probs=19.3
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 008996 136 ARWLKKEGDKVSPGEVLCEVE 156 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evE 156 (547)
++|.+++|+.|.+||+|++|+
T Consensus 73 v~~~~~dG~~v~~g~~l~~v~ 93 (299)
T 2jbm_A 73 VSWFLPEGSKLVPVARVAEVR 93 (299)
T ss_dssp EEESSCTTCEECSSEEEEEEE
T ss_pred EEEEcCCCCCCCCCCEEEEEE
Confidence 479999999999999999987
No 134
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=41.00 E-value=9.8 Score=34.93 Aligned_cols=28 Identities=39% Similarity=0.574 Sum_probs=23.3
Q ss_pred CeeEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 131 QEGNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 131 ~eg~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
-.|+=.+.+|++||+|++||+|+++.-+
T Consensus 91 l~G~gF~~~V~~Gd~V~~G~~L~~~d~~ 118 (162)
T 1ax3_A 91 LKGEGFTSFVSEGDRVEPGQKLLEVDLD 118 (162)
T ss_dssp TTTTTEEESCCCCSEECSEEEEEEECHH
T ss_pred cCCCccEEEEeCCCEEcCCCEEEEECHH
Confidence 3456678899999999999999998653
No 135
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=39.83 E-value=38 Score=36.30 Aligned_cols=43 Identities=9% Similarity=0.159 Sum_probs=35.2
Q ss_pred EEeCCeeEEEecCcCeEEEE-----------------------------EeeCCCCeeeeCCCEEEEEeccCC
Q 008996 155 VETDKATVEMECMEEGYLAK-----------------------------IVKGDGSKEIKVGEVIAITVEEEE 198 (547)
Q Consensus 155 vEtdKa~~ev~ap~~G~l~k-----------------------------i~~~~G~~~v~vG~~l~~i~~~~~ 198 (547)
+-..+...+|.|+.+|||.. +.++.|+ .|..|++|++|..+.+
T Consensus 366 l~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lG~gr~~~~id~~~Gi~l~~k~G~-~V~~g~~l~~i~~~~~ 437 (474)
T 1uou_A 366 LPRAREQEELLAPADGTVELVRALPLALVLHELGAGRAGEPLRLGVGAELLVDVGQ-RLRRGTPWLRVHRDGP 437 (474)
T ss_dssp SCCCSEEEEEECSSCEEEEEECHHHHHHHHHHHHC------CCSSCEEEECSCTTC-EECTTCEEEEEEESSS
T ss_pred CCCCCeeEEEECCCCeEEEEecHHHHHHHHHHhCCCCcCCccCCCCceEEEccCCC-EECCCCeEEEEEcCCh
Confidence 45678888999999999954 4778897 8999999999976543
No 136
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=39.56 E-value=23 Score=35.85 Aligned_cols=36 Identities=14% Similarity=0.251 Sum_probs=29.5
Q ss_pred CeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 159 KATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 159 Ka~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
..+.-|.||.+|.+. ..++.|+ .|+.|++|+.|.+.
T Consensus 255 ~~~~~v~A~~~Gl~~-~~v~~Gd-~V~~G~~la~I~dp 290 (331)
T 3na6_A 255 DGDCYLFSEHDGLFE-IMIDLGE-PVQEGDLVARVWSP 290 (331)
T ss_dssp CSCCCEECSSCEEEE-ESSCTTC-EECTTCEEEEEECS
T ss_pred CCcEEEeCCCCeEEE-EcCCCCC-EEcCCCEEEEEEcC
Confidence 344568999999886 4689997 89999999998763
No 137
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=37.39 E-value=18 Score=38.45 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=25.7
Q ss_pred CCCeeEEEEEEcCCCCeecCCCeEEEEEeCC
Q 008996 129 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 159 (547)
Q Consensus 129 ~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdK 159 (547)
.++-+.=+.++++.||.|++||+|++|=.++
T Consensus 374 ~id~~~Gi~l~~~~G~~V~~g~~l~~i~~~~ 404 (436)
T 3h5q_A 374 DIDLAVGIVLNKKIGDKVEEGESLLTIHSNR 404 (436)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEESS
T ss_pred CCCCCCceEEecCCcCEeCCCCeEEEEeCCh
Confidence 4556677899999999999999999986443
No 138
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=36.87 E-value=13 Score=34.59 Aligned_cols=21 Identities=19% Similarity=0.150 Sum_probs=15.1
Q ss_pred EEEEcCCCCeecCCCeEEEEE
Q 008996 136 ARWLKKEGDKVSPGEVLCEVE 156 (547)
Q Consensus 136 ~~w~v~~Gd~V~~gd~l~evE 156 (547)
.++.|++||.|++||+|+.+-
T Consensus 83 ~~i~V~~G~~V~~Gq~IG~vG 103 (182)
T 3it5_A 83 DQIQVSNGQQVSADTKLGVYA 103 (182)
T ss_dssp ESCCCCTTCEECTTCEEEEEC
T ss_pred CccccCCCCEEcCCCEEEeec
Confidence 345577788888888877775
No 139
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=33.85 E-value=27 Score=37.01 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=26.0
Q ss_pred CCCeeEEEEEEcCCCCeecCCCeEEEEEeCC
Q 008996 129 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 159 (547)
Q Consensus 129 ~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdK 159 (547)
.++-+.=+.++++.||.|++||+|++|=+++
T Consensus 371 ~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 371 VIDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp CCCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 3555666899999999999999999998764
No 140
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=33.52 E-value=27 Score=36.89 Aligned_cols=31 Identities=35% Similarity=0.461 Sum_probs=25.8
Q ss_pred CCCeeEEEEEEcCCCCeecCCCeEEEEEeCC
Q 008996 129 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 159 (547)
Q Consensus 129 ~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdK 159 (547)
.++-+.=+.++++.||.|++||+|++|=+++
T Consensus 363 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 393 (423)
T 2dsj_A 363 PIDHGVGVYLLKKPGDRVERGEALALVYHRR 393 (423)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEEECS
T ss_pred CCCcCcCeeeeccCCCEeCCCCeEEEEEeCC
Confidence 3555566789999999999999999997754
No 141
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=32.22 E-value=29 Score=37.19 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=24.7
Q ss_pred CCeeEEEEEEcCCCCeecCCCeEEEEEeCC
Q 008996 130 MQEGNIARWLKKEGDKVSPGEVLCEVETDK 159 (547)
Q Consensus 130 ~~eg~i~~w~v~~Gd~V~~gd~l~evEtdK 159 (547)
++-+.=+.++++.||.|++||+|++|=+++
T Consensus 407 id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 407 LRLGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp CCSSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred cCCCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 334455789999999999999999997653
No 142
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=31.35 E-value=36 Score=35.50 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=27.3
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHhhc
Q 008996 512 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 540 (547)
Q Consensus 512 m~ltlt~DHRviDGa~aa~FL~~lk~~LE 540 (547)
+-|++++.|.+.||.-+..|++.+.++..
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r 190 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIAR 190 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhc
Confidence 67899999999999999999999999876
No 143
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=30.66 E-value=46 Score=30.60 Aligned_cols=45 Identities=22% Similarity=0.263 Sum_probs=34.6
Q ss_pred eecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEeccCCCcc
Q 008996 145 KVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEEEEDIP 201 (547)
Q Consensus 145 ~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~~~~~~ 201 (547)
.+++|+.||.++. +|+-.-..+.+|+ .|..|+.||.+.....++-
T Consensus 95 ~lkkGt~L~lvpa-----------eG~~V~~i~~~G~-rV~kgd~lA~i~T~KGEVR 139 (169)
T 3d4r_A 95 YLKAGTKLISVPA-----------EGYKVYPIMDFGF-RVLKGYRLATLESKKGDLR 139 (169)
T ss_dssp EECTTCBCEEEEE-----------CSSEEEECCCCSE-EECTTCEEEEEECTTCCEE
T ss_pred EEcCCCEEEEEEe-----------CceEEEEEcCcCc-EeccCCeEEEEEecCceEE
Confidence 4667778888864 4666667789997 9999999999877666654
No 144
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=30.62 E-value=36 Score=35.29 Aligned_cols=30 Identities=13% Similarity=0.153 Sum_probs=27.3
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHhhcC
Q 008996 512 MSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 541 (547)
Q Consensus 512 m~ltlt~DHRviDGa~aa~FL~~lk~~LE~ 541 (547)
+-|++++.|.+.||.-+..|++.+.+....
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg 177 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRN 177 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999987754
No 145
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=30.36 E-value=38 Score=35.23 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=27.2
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHhhcC
Q 008996 512 MSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 541 (547)
Q Consensus 512 m~ltlt~DHRviDGa~aa~FL~~lk~~LE~ 541 (547)
+-|++++.|.+.||.-+..|++.|.+....
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg 179 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMARG 179 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999988753
No 146
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=29.54 E-value=39 Score=34.91 Aligned_cols=30 Identities=17% Similarity=0.272 Sum_probs=27.4
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHhhcC
Q 008996 512 MSVTLSCDHRVIDGAIGAEWLKAFKGYIEN 541 (547)
Q Consensus 512 m~ltlt~DHRviDGa~aa~FL~~lk~~LE~ 541 (547)
+-|++++.|.+.||.-+..|++.|.++...
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 181 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCRG 181 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhcC
Confidence 678999999999999999999999988753
No 147
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=29.07 E-value=37 Score=35.30 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=27.3
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHhhc
Q 008996 512 MSVTLSCDHRVIDGAIGAEWLKAFKGYIE 540 (547)
Q Consensus 512 m~ltlt~DHRviDGa~aa~FL~~lk~~LE 540 (547)
+-|++++.|.+.||.-+..|++.|.++..
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 185 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNK 185 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhh
Confidence 67899999999999999999999999876
No 148
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=28.00 E-value=22 Score=35.50 Aligned_cols=21 Identities=33% Similarity=0.686 Sum_probs=19.0
Q ss_pred EEEEcCCCCeecCC------CeEEEEE
Q 008996 136 ARWLKKEGDKVSPG------EVLCEVE 156 (547)
Q Consensus 136 ~~w~v~~Gd~V~~g------d~l~evE 156 (547)
++|.+++|+.|.+| |+|++|+
T Consensus 69 v~~~~~eG~~v~~g~~~~~~~~l~~v~ 95 (294)
T 3c2e_A 69 VEWLFKEGSFLEPSKNDSGKIVVAKIT 95 (294)
T ss_dssp EEESSCTTCEECGGGSSSSCEEEEEEE
T ss_pred EEEEeCCCCEeCCCCCCCCCcEEEEEE
Confidence 47999999999999 9999887
No 149
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=27.83 E-value=25 Score=34.39 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=21.1
Q ss_pred eEEEEEEcCCCCeecCCCeEEEEEeC
Q 008996 133 GNIARWLKKEGDKVSPGEVLCEVETD 158 (547)
Q Consensus 133 g~i~~w~v~~Gd~V~~gd~l~evEtd 158 (547)
+-+.++.|++||.|++||+|+.+-..
T Consensus 130 ~HL~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 130 QSLSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp EEESEESCCTTCEECTTCEEEECBCC
T ss_pred ecCCccccCCCCEECCCCEEEEeCCc
Confidence 44557789999999999999988653
No 150
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=27.71 E-value=60 Score=35.71 Aligned_cols=53 Identities=23% Similarity=0.370 Sum_probs=39.7
Q ss_pred EcCCCCeecCCCeEEEEEeCC-eeEEE--ecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 139 LKKEGDKVSPGEVLCEVETDK-ATVEM--ECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 139 ~v~~Gd~V~~gd~l~evEtdK-a~~ev--~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
.+++||.|..||++++|.-.. ....| +....|+|..| .+| ...+-++++.+..
T Consensus 130 ~~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~v~~i--~~g--~~~v~~~v~~i~~ 185 (600)
T 3vr4_A 130 TIEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI--ESG--SFTIDDPICVIET 185 (600)
T ss_dssp CSCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE--CCE--EECTTSCCEEEEE
T ss_pred ccccCCEecCCceEEEEecCCceeeeeecCCCCCceEEEe--cCC--cceeceeEEEEec
Confidence 379999999999999986433 33444 34468999887 677 4889999988743
No 151
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=27.34 E-value=54 Score=33.34 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=30.1
Q ss_pred EeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEEEEEecc
Q 008996 156 ETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 156 EtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~~ 196 (547)
+..+...-+.|+.+|.+. ..++.|+ .|+.|++|+.+.+.
T Consensus 262 ~~~~~~~~v~A~~~G~~~-~~~~~g~-~V~~G~~La~i~d~ 300 (354)
T 3cdx_A 262 MVREADAYVMAPRTGLFE-PTHYVGE-EVRTGETAGWIHFV 300 (354)
T ss_dssp ECCCGGGEEECSSCEEEE-ESCCTTC-EECTTSEEEEEECT
T ss_pred eecCCcEEEECCCCEEEE-EeCCCCC-EeCCCCEEEEEECC
Confidence 333445568999999764 5678997 99999999998753
No 152
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=27.04 E-value=27 Score=34.82 Aligned_cols=21 Identities=19% Similarity=0.166 Sum_probs=13.6
Q ss_pred EeeCCCCeeeeCCCEEEEEecc
Q 008996 175 IVKGDGSKEIKVGEVIAITVEE 196 (547)
Q Consensus 175 i~~~~G~~~v~vG~~l~~i~~~ 196 (547)
+.+++|+ .|+.|++|+.+...
T Consensus 232 i~V~~G~-~V~~Gq~IG~vG~t 252 (282)
T 2hsi_A 232 IDVKLGQ-QVPRGGVLGKVGAT 252 (282)
T ss_dssp ECSCTTC-EECTTCEEEECCCT
T ss_pred cccCCcC-EECCCCEEEEECCC
Confidence 3466775 67777777766543
No 153
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=26.43 E-value=86 Score=27.68 Aligned_cols=31 Identities=26% Similarity=0.226 Sum_probs=24.6
Q ss_pred EecCcCeEEEEEee-CCCCeeeeCCCEEEEEec
Q 008996 164 MECMEEGYLAKIVK-GDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 164 v~ap~~G~l~ki~~-~~G~~~v~vG~~l~~i~~ 195 (547)
+.+|.-|.|..+.. ++|+ .|+.|++|+++..
T Consensus 39 ~a~~~lG~i~~V~lp~vGd-~V~~Gd~l~~VEs 70 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVGR-EVKKGEVVASIES 70 (136)
T ss_dssp HHHHHHCSEEEEECCCTTC-EECTTCEEEEEEE
T ss_pred hhcccCCCcEEEEecCCCC-EEeCCCEEEEEEE
Confidence 44677787777766 9997 8999999999843
No 154
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=26.36 E-value=28 Score=34.90 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=15.3
Q ss_pred EeeCCCCeeeeCCCEEEEEeccC
Q 008996 175 IVKGDGSKEIKVGEVIAITVEEE 197 (547)
Q Consensus 175 i~~~~G~~~v~vG~~l~~i~~~~ 197 (547)
+.+++|+ .|+.|++|+.+...+
T Consensus 239 i~Vk~Gq-~V~~GqvIG~vG~TG 260 (291)
T 1qwy_A 239 LTVSAGD-KVKAGDQIAYSGSTG 260 (291)
T ss_dssp ECCCTTC-EECTTCEEEECCCCS
T ss_pred cccCCcC-EECCCCEEEEECCCC
Confidence 4567886 788888888765443
No 155
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=25.41 E-value=28 Score=36.97 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=26.1
Q ss_pred CCCeeEEEEEEcCCCCeecCCCeEEEEEeCC
Q 008996 129 TMQEGNIARWLKKEGDKVSPGEVLCEVETDK 159 (547)
Q Consensus 129 ~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdK 159 (547)
.++-+.=+.++++.||.|++||+|++|=+++
T Consensus 376 ~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 406 (440)
T 2tpt_A 376 TIDYSVGFTDMARLGDQVDGQRPLAVIHAKD 406 (440)
T ss_dssp CCCSSCEEESCCCTTCEEBTTBCSEEEEESS
T ss_pred CCCcCcCeeEeccCCCEECCCCeEEEEecCC
Confidence 4555666889999999999999999998764
No 156
>3mfy_A V-type ATP synthase alpha chain; A-type ATP synthase, P loop, phenylalanine mutant, hydrolase; 2.35A {Pyrococcus horikoshii} PDB: 3i4l_A* 3i72_A 3i73_A* 3p20_A 3ikj_A 3qg1_A 3nd8_A 3nd9_A 1vdz_A 3qia_A 3qjy_A 3m4y_A 3se0_A 3sdz_A
Probab=24.39 E-value=97 Score=34.00 Aligned_cols=54 Identities=30% Similarity=0.377 Sum_probs=39.6
Q ss_pred EcCCCCeecCCCeEEEEEe-CCeeEEE--ecCcCeEEEEEeeCCCCeeeeCCCEEEEEec
Q 008996 139 LKKEGDKVSPGEVLCEVET-DKATVEM--ECMEEGYLAKIVKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 139 ~v~~Gd~V~~gd~l~evEt-dKa~~ev--~ap~~G~l~ki~~~~G~~~v~vG~~l~~i~~ 195 (547)
.+++||.|..||++++|.- .-.+..| +....|+|..+ +.+| ...+-++++.+..
T Consensus 123 ~~~~gd~v~~G~i~g~v~e~~~~~~~imvpp~~~g~v~~i-~~~g--~~~v~~~i~~i~~ 179 (588)
T 3mfy_A 123 KAKVGDKVVGGDIIGEVPETSIIVHKIMVPPGIEGEIVEI-AEEG--DYTIEEVIAKVKT 179 (588)
T ss_dssp CCCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE-CCSE--EECTTSEEEEEEC
T ss_pred ccccCcccccCceEEEEecccceeeeeecCCCCCceEEEe-ccCC--cccccceEEEEec
Confidence 4799999999999998753 3333443 44478999776 4677 4889999987743
No 157
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=24.15 E-value=80 Score=29.17 Aligned_cols=62 Identities=6% Similarity=0.054 Sum_probs=37.5
Q ss_pred eEEecCCC--C------CCCCeeEEEEEEcCCCCeecCCCeEEEEEeCCeeEEEecCcCeEEEEEeeCCCCeeeeCCCEE
Q 008996 119 QEIGMPSL--S------PTMQEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIVKGDGSKEIKVGEVI 190 (547)
Q Consensus 119 ~~i~mP~l--g------~~~~eg~i~~w~v~~Gd~V~~gd~l~evEtdKa~~ev~ap~~G~l~ki~~~~G~~~v~vG~~l 190 (547)
++|..|.= + -.+.+|+|+.-- | ....|+.+.-...+-+- +.++.+++|+ .|+.|++|
T Consensus 35 iDi~~~~G~~g~~gtpV~A~~~G~V~~~~---------G-~~V~I~H~~g~~t~Y~H----L~~i~V~~G~-~V~~Gq~I 99 (182)
T 3it5_A 35 FDASYDWPRWGSATYSVVAAHAGTVRVLS---------R-CQVRVTHPSGWATNYYH----MDQIQVSNGQ-QVSADTKL 99 (182)
T ss_dssp EEEESSCCCTTSCCCEEECSSSEEEEEEE---------T-TEEEEECTTSEEEEEES----EESCCCCTTC-EECTTCEE
T ss_pred EEecCCCCCCCCCCCEEEeccCEEEEEEC---------C-eEEEEEECCcEEEEEEc----CCccccCCCC-EEcCCCEE
Confidence 67777721 1 124667776642 2 34455554422222222 4567899997 89999999
Q ss_pred EEEec
Q 008996 191 AITVE 195 (547)
Q Consensus 191 ~~i~~ 195 (547)
+.+..
T Consensus 100 G~vG~ 104 (182)
T 3it5_A 100 GVYAG 104 (182)
T ss_dssp EEECS
T ss_pred EeecC
Confidence 99754
No 158
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=22.90 E-value=34 Score=33.42 Aligned_cols=19 Identities=16% Similarity=0.373 Sum_probs=10.9
Q ss_pred eeCCCCeeeeCCCEEEEEec
Q 008996 176 VKGDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 176 ~~~~G~~~v~vG~~l~~i~~ 195 (547)
.+++|+ .|+.|++|+.+..
T Consensus 183 ~V~~G~-~V~~Gq~IG~vG~ 201 (252)
T 3nyy_A 183 ELEKGD-PVKAGDLLGYMGD 201 (252)
T ss_dssp SCCTTC-EECTTCEEEECBC
T ss_pred cCCCCC-EECCCCEEEEECC
Confidence 355664 5666666666543
No 159
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=22.05 E-value=5.7e+02 Score=25.05 Aligned_cols=68 Identities=13% Similarity=0.121 Sum_probs=42.6
Q ss_pred CcccHHHHHHHHHHHHHhhCCCCCceeccCcceecCcccEEEEeecC----------C-----CeEEeEEccCCCCCHHH
Q 008996 371 KRISVNDLVIKAAALALRKVPRCNSSWADEYIRQFKNVNINVAVQTE----------N-----GLYVPVIRDADKKGLST 435 (547)
Q Consensus 371 ~klTi~~~liKA~a~AL~~~P~lN~~~~~~~i~~~~~vnIgvAV~~~----------~-----GL~vPVI~~ad~~sl~e 435 (547)
.++|++.++..|.+.+|.++ .+.+ ..++.||+.++.- + |.++-++.--...++.+
T Consensus 233 ~~~t~~~~l~aa~~~~l~r~-----~~~~-----~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~~~~~~~ 302 (422)
T 1q9j_A 233 HRLSLNAVVAAAILLTEWQL-----RNTP-----HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVD 302 (422)
T ss_dssp TTCCHHHHHHHHHHHHHHHH-----HTCS-----SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCSSCCHHH
T ss_pred hCCCHHHHHHHHHHHHHHhc-----ccCC-----CceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccCCCCHHH
Confidence 46899999999999999975 1111 1345666666621 1 33333333233468999
Q ss_pred HHHHHHHHHHHHh
Q 008996 436 IAEEVRQLAQKAK 448 (547)
Q Consensus 436 Ia~~i~~l~~kar 448 (547)
+.+++++-...+.
T Consensus 303 ~l~~v~~~~~~~~ 315 (422)
T 1q9j_A 303 LASDIVATLRADL 315 (422)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9888887655543
No 160
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=21.25 E-value=1.2e+02 Score=26.46 Aligned_cols=30 Identities=10% Similarity=0.037 Sum_probs=24.3
Q ss_pred ecCcCeEEEEEee-CCCCeeeeCCCEEEEEec
Q 008996 165 ECMEEGYLAKIVK-GDGSKEIKVGEVIAITVE 195 (547)
Q Consensus 165 ~ap~~G~l~ki~~-~~G~~~v~vG~~l~~i~~ 195 (547)
..+.-|.|..+.. ++|+ .|..|++|+.+..
T Consensus 31 a~~~lG~i~~v~lp~~G~-~V~~g~~l~~vEs 61 (131)
T 1hpc_A 31 AQDHLGEVVFVELPEPGV-SVTKGKGFGAVES 61 (131)
T ss_dssp HHHHHCSEEEEECCCTTC-EECBTSEEEEEEE
T ss_pred hcccCCCceEEEecCCCC-EEeCCCEEEEEEe
Confidence 3567788888877 8997 8999999998843
Done!