Query         008997
Match_columns 547
No_of_seqs    382 out of 2213
Neff          5.4 
Searched_HMMs 46136
Date          Thu Mar 28 19:08:54 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008997.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008997hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0584 Serine/threonine prote 100.0 1.2E-34 2.7E-39  314.1  13.8  293    1-308   211-524 (632)
  2 KOG0033 Ca2+/calmodulin-depend  99.6 1.4E-15 2.9E-20  151.8   8.0   91    1-92    179-273 (355)
  3 KOG0578 p21-activated serine/t  99.6 1.4E-15 3.1E-20  164.8   7.6  101    1-101   436-538 (550)
  4 KOG0605 NDR and related serine  99.6 4.1E-15   9E-20  160.5   8.0   96    1-97    355-456 (550)
  5 KOG0581 Mitogen-activated prot  99.5 1.6E-14 3.6E-19  150.4   7.6   93    1-93    244-342 (364)
  6 KOG0201 Serine/threonine prote  99.5 1.3E-14 2.8E-19  153.8   3.6   94    1-96    178-273 (467)
  7 KOG0615 Serine/threonine prote  99.5 6.9E-15 1.5E-19  154.9   1.5   93    1-93    345-444 (475)
  8 KOG0582 Ste20-like serine/thre  99.5 6.5E-14 1.4E-18  148.8   8.8   93    1-94    197-301 (516)
  9 KOG0598 Ribosomal protein S6 k  99.5 6.8E-14 1.5E-18  145.6   7.0   96    1-98    192-293 (357)
 10 KOG0610 Putative serine/threon  99.5 9.6E-14 2.1E-18  146.5   8.0   94    1-95    302-401 (459)
 11 smart00750 KIND kinase non-cat  99.5 4.5E-14 9.7E-19  130.8   4.7   90    1-90     71-169 (176)
 12 KOG0575 Polo-like serine/threo  99.4 1.5E-13 3.2E-18  150.3   7.4   88    1-91    185-274 (592)
 13 KOG0592 3-phosphoinositide-dep  99.4 2.3E-13 4.9E-18  147.4   8.2   93    1-96    254-348 (604)
 14 KOG0616 cAMP-dependent protein  99.4 1.7E-13 3.7E-18  139.7   6.6   95    1-98    208-309 (355)
 15 KOG0032 Ca2+/calmodulin-depend  99.4 7.2E-13 1.6E-17  141.3  10.0   91    1-92    205-299 (382)
 16 KOG0983 Mitogen-activated prot  99.4 4.2E-13 9.2E-18  135.8   7.2   94    1-94    258-357 (391)
 17 cd07848 STKc_CDKL5 Catalytic d  99.4 1.1E-12 2.5E-17  130.1   8.5   88    1-89    168-287 (287)
 18 KOG0588 Serine/threonine prote  99.4 9.6E-13 2.1E-17  145.2   8.6   91    2-95    179-272 (786)
 19 cd05612 STKc_PRKX_like Catalyt  99.4 9.4E-13   2E-17  132.3   7.9   92    1-95    165-263 (291)
 20 KOG0198 MEKK and related serin  99.4 2.4E-13 5.2E-18  141.3   3.7   92    1-93    188-283 (313)
 21 PTZ00263 protein kinase A cata  99.4 9.9E-13 2.1E-17  135.0   7.8   92    1-95    182-280 (329)
 22 KOG0694 Serine/threonine prote  99.4 8.5E-13 1.8E-17  146.1   7.6   94    1-97    535-635 (694)
 23 cd07862 STKc_CDK6 Catalytic do  99.4 1.4E-12 3.1E-17  129.6   8.4   88    1-89    176-290 (290)
 24 KOG0603 Ribosomal protein S6 k  99.3 9.2E-13   2E-17  144.9   6.7   85    1-89    480-566 (612)
 25 cd05571 STKc_PKB Catalytic dom  99.3 1.1E-12 2.4E-17  134.2   6.7   92    1-95    162-260 (323)
 26 KOG0604 MAP kinase-activated p  99.3 7.7E-13 1.7E-17  135.3   5.4   94    1-94    230-330 (400)
 27 PTZ00284 protein kinase; Provi  99.3 1.2E-12 2.6E-17  141.3   7.0   91    1-92    312-444 (467)
 28 PTZ00036 glycogen synthase kin  99.3 1.3E-12 2.8E-17  140.7   7.2   92    1-92    237-357 (440)
 29 cd05590 STKc_nPKC_eta Catalyti  99.3   2E-12 4.3E-17  132.3   7.7   92    1-95    163-262 (320)
 30 KOG0599 Phosphorylase kinase g  99.3   1E-12 2.3E-17  133.0   5.4   90    1-91    189-288 (411)
 31 cd06649 PKc_MEK2 Catalytic dom  99.3 2.5E-12 5.3E-17  132.0   8.1   92    1-93    169-308 (331)
 32 cd07869 STKc_PFTAIRE1 Catalyti  99.3 2.6E-12 5.7E-17  129.4   8.1   93    1-93    170-295 (303)
 33 cd05573 STKc_ROCK_NDR_like Cat  99.3 1.5E-12 3.3E-17  133.3   6.5   94    1-95    197-294 (350)
 34 cd05631 STKc_GRK4 Catalytic do  99.3 2.1E-12 4.5E-17  129.3   7.3   93    1-95    168-270 (285)
 35 cd05585 STKc_YPK1_like Catalyt  99.3   2E-12 4.4E-17  131.4   7.3   91    1-94    160-255 (312)
 36 cd06609 STKc_MST3_like Catalyt  99.3 4.1E-12   9E-17  125.3   9.1   94    1-95    165-260 (274)
 37 KOG0579 Ste20-like serine/thre  99.3 2.5E-12 5.4E-17  141.0   7.9   97    1-98    197-301 (1187)
 38 cd06605 PKc_MAPKK Catalytic do  99.3 3.2E-12 6.9E-17  124.8   8.0   92    1-92    166-263 (265)
 39 cd06625 STKc_MEKK3_like Cataly  99.3 4.7E-12   1E-16  123.4   9.1   88    1-89    174-263 (263)
 40 cd07863 STKc_CDK4 Catalytic do  99.3 3.7E-12   8E-17  126.3   8.5   88    1-89    174-288 (288)
 41 cd06616 PKc_MKK4 Catalytic dom  99.3 2.5E-12 5.4E-17  127.8   7.2   93    1-93    174-274 (288)
 42 cd06637 STKc_TNIK Catalytic do  99.3 3.8E-12 8.3E-17  124.9   8.4   88    1-89    178-272 (272)
 43 PTZ00426 cAMP-dependent protei  99.3 2.3E-12   5E-17  133.7   7.2   92    1-95    195-293 (340)
 44 cd07871 STKc_PCTAIRE3 Catalyti  99.3 3.4E-12 7.5E-17  127.9   8.2   88    1-89    170-288 (288)
 45 KOG4279 Serine/threonine prote  99.3 4.7E-13   1E-17  147.8   2.0   93    1-93    743-839 (1226)
 46 KOG0583 Serine/threonine prote  99.3 3.1E-12 6.7E-17  135.9   8.1   89    1-92    188-281 (370)
 47 cd05570 STKc_PKC Catalytic dom  99.3 3.1E-12 6.7E-17  130.6   7.7   92    1-95    163-261 (318)
 48 cd06636 STKc_MAP4K4_6 Catalyti  99.3 4.2E-12 9.2E-17  125.7   8.4   88    1-89    188-282 (282)
 49 cd05599 STKc_NDR_like Catalyti  99.3 2.9E-12 6.3E-17  132.6   7.3   94    1-95    206-305 (364)
 50 cd05591 STKc_nPKC_epsilon Cata  99.3 3.4E-12 7.3E-17  130.3   7.5   92    1-95    163-263 (321)
 51 cd08223 STKc_Nek4 Catalytic do  99.3 6.4E-12 1.4E-16  122.1   9.0   87    1-89    169-257 (257)
 52 cd05589 STKc_PKN Catalytic dom  99.3 5.4E-12 1.2E-16  129.0   8.7   91    1-94    168-265 (324)
 53 cd06631 STKc_YSK4 Catalytic do  99.3 6.3E-12 1.4E-16  123.1   8.9   89    1-89    175-265 (265)
 54 cd06654 STKc_PAK1 Catalytic do  99.3 4.9E-12 1.1E-16  127.5   8.3   95    1-95    183-279 (296)
 55 cd05616 STKc_cPKC_beta Catalyt  99.3 4.1E-12   9E-17  129.7   7.8   92    1-95    168-266 (323)
 56 cd05628 STKc_NDR1 Catalytic do  99.3   5E-12 1.1E-16  131.5   8.5   95    1-96    203-303 (363)
 57 cd05620 STKc_nPKC_delta Cataly  99.3 4.4E-12 9.6E-17  129.5   7.9   92    1-95    163-257 (316)
 58 cd05572 STKc_cGK_PKG Catalytic  99.3 5.9E-12 1.3E-16  123.2   8.3   94    1-94    159-260 (262)
 59 cd08227 PK_STRAD_alpha Pseudok  99.3 4.2E-12 9.1E-17  129.7   7.6   91    1-92    175-313 (327)
 60 cd06608 STKc_myosinIII_like Ca  99.3 5.2E-12 1.1E-16  123.1   7.9   88    1-89    180-275 (275)
 61 cd05600 STKc_Sid2p_Dbf2p Catal  99.3 4.1E-12   9E-17  130.1   7.5   93    1-94    165-265 (333)
 62 cd06655 STKc_PAK2 Catalytic do  99.3 5.5E-12 1.2E-16  127.3   8.2   93    1-94    182-277 (296)
 63 cd05619 STKc_nPKC_theta Cataly  99.3   5E-12 1.1E-16  129.3   8.0   92    1-95    163-257 (316)
 64 cd07859 STKc_TDY_MAPK_plant Ca  99.3 5.1E-12 1.1E-16  128.4   7.8   93    1-93    173-297 (338)
 65 cd05587 STKc_cPKC Catalytic do  99.3   6E-12 1.3E-16  128.6   8.3   92    1-95    168-266 (324)
 66 cd06612 STKc_MST1_2 Catalytic   99.3 4.4E-12 9.5E-17  122.9   6.9   88    1-89    166-256 (256)
 67 cd05584 STKc_p70S6K Catalytic   99.3 6.3E-12 1.4E-16  128.6   7.9   92    1-95    167-265 (323)
 68 cd05593 STKc_PKB_gamma Catalyt  99.3 5.1E-12 1.1E-16  129.9   7.1   92    1-95    162-260 (328)
 69 cd07860 STKc_CDK2_3 Catalytic   99.3 8.6E-12 1.9E-16  123.4   8.5   89    1-89    167-284 (284)
 70 cd07876 STKc_JNK2 Catalytic do  99.3 8.4E-12 1.8E-16  129.3   8.7   90    1-91    189-320 (359)
 71 cd05625 STKc_LATS1 Catalytic d  99.3 5.3E-12 1.2E-16  132.1   7.3   95    1-96    215-315 (382)
 72 cd06639 STKc_myosinIIIB Cataly  99.3 9.1E-12   2E-16  124.1   8.5   89    1-90    195-291 (291)
 73 cd05608 STKc_GRK1 Catalytic do  99.3 7.3E-12 1.6E-16  125.0   7.7   93    1-95    164-266 (280)
 74 cd08529 STKc_FA2-like Catalyti  99.3 1.1E-11 2.5E-16  120.0   8.8   87    1-89    168-256 (256)
 75 cd07839 STKc_CDK5 Catalytic do  99.3 7.5E-12 1.6E-16  123.9   7.7   89    1-89    166-284 (284)
 76 cd06617 PKc_MKK3_6 Catalytic d  99.3 8.5E-12 1.8E-16  123.2   8.0   93    1-93    170-268 (283)
 77 cd05595 STKc_PKB_beta Catalyti  99.3 7.4E-12 1.6E-16  128.2   7.9   92    1-95    162-260 (323)
 78 cd06643 STKc_SLK Catalytic dom  99.3 9.6E-12 2.1E-16  123.4   8.4   93    1-94    170-270 (282)
 79 cd07861 STKc_CDK1_euk Catalyti  99.3 9.4E-12   2E-16  123.0   8.1   89    1-89    168-285 (285)
 80 cd05611 STKc_Rim15_like Cataly  99.3 9.7E-12 2.1E-16  121.5   8.1   93    1-94    160-259 (260)
 81 cd06610 STKc_OSR1_SPAK Catalyt  99.3 8.4E-12 1.8E-16  121.4   7.6   88    1-89    173-267 (267)
 82 cd06644 STKc_STK10_LOK Catalyt  99.3 1.4E-11   3E-16  123.2   9.3   95    1-96    177-279 (292)
 83 cd05596 STKc_ROCK Catalytic do  99.3 8.2E-12 1.8E-16  130.9   7.9   94    1-95    210-313 (370)
 84 cd06651 STKc_MEKK3 Catalytic d  99.3 9.2E-12   2E-16  122.5   7.8   88    1-90    176-265 (266)
 85 PHA02988 hypothetical protein;  99.3   1E-11 2.3E-16  124.9   8.3   84    1-85    187-274 (283)
 86 cd06624 STKc_ASK Catalytic dom  99.3 9.7E-12 2.1E-16  122.3   7.8   89    1-89    176-268 (268)
 87 cd06611 STKc_SLK_like Catalyti  99.3 1.1E-11 2.4E-16  122.6   8.3   93    1-94    170-270 (280)
 88 cd05627 STKc_NDR2 Catalytic do  99.3 3.7E-12   8E-17  132.2   5.1   95    1-96    203-303 (360)
 89 cd07868 STKc_CDK8 Catalytic do  99.3 1.5E-11 3.3E-16  124.3   8.9   89    1-89    182-317 (317)
 90 cd05575 STKc_SGK Catalytic dom  99.3   8E-12 1.7E-16  127.6   7.0   92    1-95    163-260 (323)
 91 cd06648 STKc_PAK_II Catalytic   99.3 1.7E-11 3.6E-16  122.8   9.1   93    1-94    182-277 (285)
 92 KOG0660 Mitogen-activated prot  99.2 1.1E-11 2.4E-16  129.1   7.9   91    2-92    195-316 (359)
 93 KOG0607 MAP kinase-interacting  99.2 5.5E-12 1.2E-16  130.0   5.6   95    1-95    253-370 (463)
 94 cd05592 STKc_nPKC_theta_delta   99.2 1.1E-11 2.4E-16  126.5   7.8   91    1-94    163-256 (316)
 95 cd05574 STKc_phototropin_like   99.2 1.1E-11 2.4E-16  125.2   7.7   93    1-94    199-297 (316)
 96 cd05601 STKc_CRIK Catalytic do  99.2   4E-12 8.7E-17  129.8   4.5   94    1-95    170-272 (330)
 97 cd06647 STKc_PAK_I Catalytic d  99.2 7.4E-12 1.6E-16  126.0   6.3  100    1-100   182-283 (293)
 98 cd05629 STKc_NDR_like_fungal C  99.2 7.6E-12 1.7E-16  130.7   6.6   93    1-94    215-313 (377)
 99 cd05588 STKc_aPKC Catalytic do  99.2 1.1E-11 2.5E-16  127.2   7.7   92    1-94    163-270 (329)
100 cd07875 STKc_JNK1 Catalytic do  99.2 1.3E-11 2.9E-16  128.0   8.3   90    1-91    192-323 (364)
101 cd06614 STKc_PAK Catalytic dom  99.2 1.6E-11 3.4E-16  122.2   8.4   97    1-98    183-282 (286)
102 cd05594 STKc_PKB_alpha Catalyt  99.2 3.7E-12 7.9E-17  130.2   3.9   92    1-95    163-261 (325)
103 cd06619 PKc_MKK5 Catalytic dom  99.2 1.9E-11 4.2E-16  121.5   9.0   94    1-94    160-261 (279)
104 cd06628 STKc_MAPKKK_Byr2_like   99.2 1.6E-11 3.4E-16  120.3   8.2   87    1-89    179-267 (267)
105 cd05579 STKc_MAST_like Catalyt  99.2 1.9E-11 4.2E-16  118.3   8.7   93    1-94    168-265 (265)
106 cd06623 PKc_MAPKK_plant_like C  99.2 1.5E-11 3.3E-16  119.4   8.0   91    1-92    167-262 (264)
107 KOG0612 Rho-associated, coiled  99.2 6.6E-12 1.4E-16  144.8   6.2   94    1-95    243-347 (1317)
108 cd05614 STKc_MSK2_N N-terminal  99.2 1.1E-11 2.3E-16  126.8   7.0   92    1-94    173-275 (332)
109 cd08218 STKc_Nek1 Catalytic do  99.2   2E-11 4.3E-16  118.8   8.5   87    1-89    168-256 (256)
110 cd07874 STKc_JNK3 Catalytic do  99.2 1.5E-11 3.2E-16  127.1   8.1   91    1-92    185-317 (355)
111 PHA03390 pk1 serine/threonine-  99.2 1.8E-11 3.8E-16  121.6   8.2   87    1-90    173-266 (267)
112 cd06606 STKc_MAPKKK Catalytic   99.2 1.9E-11 4.1E-16  117.2   8.1   89    1-89    170-260 (260)
113 cd05605 STKc_GRK4_like Catalyt  99.2 1.1E-11 2.5E-16  123.9   6.7   93    1-95    168-270 (285)
114 cd07837 STKc_CdkB_plant Cataly  99.2 1.8E-11 3.9E-16  121.8   8.0   89    1-90    178-295 (295)
115 cd06652 STKc_MEKK2 Catalytic d  99.2 2.3E-11 4.9E-16  119.4   8.6   89    1-90    176-265 (265)
116 cd06650 PKc_MEK1 Catalytic dom  99.2 1.5E-11 3.3E-16  126.7   7.6   91    1-92    169-305 (333)
117 cd05626 STKc_LATS2 Catalytic d  99.2 1.6E-11 3.4E-16  128.8   7.8   96    1-97    215-316 (381)
118 cd07831 STKc_MOK Catalytic dom  99.2 2.1E-11 4.5E-16  120.1   8.2   88    1-89    165-282 (282)
119 cd05615 STKc_cPKC_alpha Cataly  99.2   2E-11 4.4E-16  125.0   8.4   92    1-95    168-266 (323)
120 cd07872 STKc_PCTAIRE2 Catalyti  99.2 1.8E-11 3.8E-16  123.8   7.7   91    1-92    171-292 (309)
121 cd05633 STKc_GRK3 Catalytic do  99.2 1.7E-11 3.7E-16  122.5   7.5   93    1-94    162-263 (279)
122 cd06618 PKc_MKK7 Catalytic dom  99.2 2.2E-11 4.8E-16  122.1   8.3   93    1-93    181-280 (296)
123 cd05598 STKc_LATS Catalytic do  99.2 7.7E-12 1.7E-16  130.4   5.1   94    1-95    211-310 (376)
124 cd05618 STKc_aPKC_iota Catalyt  99.2 1.5E-11 3.2E-16  126.6   7.0   92    1-94    163-270 (329)
125 cd06607 STKc_TAO Catalytic dom  99.2 3.2E-11 6.9E-16  121.8   9.2   93    1-94    178-275 (307)
126 cd07873 STKc_PCTAIRE1 Catalyti  99.2 2.4E-11 5.3E-16  122.1   8.3   91    1-92    171-292 (301)
127 cd07835 STKc_CDK1_like Catalyt  99.2 2.6E-11 5.5E-16  120.0   8.3   88    1-89    166-283 (283)
128 cd05607 STKc_GRK7 Catalytic do  99.2 2.1E-11 4.5E-16  121.6   7.6   93    1-94    161-262 (277)
129 KOG4717 Serine/threonine prote  99.2 1.4E-11 3.1E-16  132.8   6.8   90    2-94    186-278 (864)
130 cd08225 STKc_Nek5 Catalytic do  99.2   3E-11 6.5E-16  117.1   8.4   87    1-89    169-257 (257)
131 cd05630 STKc_GRK6 Catalytic do  99.2 1.6E-11 3.4E-16  123.2   6.6   93    1-94    168-269 (285)
132 cd08220 STKc_Nek8 Catalytic do  99.2 3.5E-11 7.7E-16  116.6   8.8   87    1-89    168-256 (256)
133 cd06630 STKc_MEKK1 Catalytic d  99.2 3.2E-11 6.9E-16  117.9   8.4   90    1-90    175-268 (268)
134 cd07853 STKc_NLK Catalytic dom  99.2 2.3E-11 4.9E-16  126.9   7.9   91    1-92    171-294 (372)
135 cd08217 STKc_Nek2 Catalytic do  99.2 3.7E-11 7.9E-16  116.3   8.7   87    1-89    177-265 (265)
136 cd06656 STKc_PAK3 Catalytic do  99.2 1.4E-11   3E-16  124.3   5.9   94    1-94    182-277 (297)
137 PLN00034 mitogen-activated pro  99.2 3.6E-11 7.9E-16  124.5   8.9   91    1-92    235-334 (353)
138 cd07867 STKc_CDC2L6 Catalytic   99.2 3.7E-11   8E-16  121.0   8.7   89    1-89    182-317 (317)
139 cd07847 STKc_CDKL1_4 Catalytic  99.2 3.4E-11 7.4E-16  118.8   8.1   89    1-89    167-286 (286)
140 KOG4721 Serine/threonine prote  99.2 7.2E-12 1.6E-16  136.4   3.6   85    1-86    278-364 (904)
141 cd05617 STKc_aPKC_zeta Catalyt  99.2 2.8E-11   6E-16  124.2   7.8   93    1-95    163-269 (327)
142 cd05606 STKc_beta_ARK Catalyti  99.2 3.6E-11 7.9E-16  119.9   8.3   93    1-95    162-264 (278)
143 cd07878 STKc_p38beta_MAPK11 Ca  99.2 3.2E-11 6.9E-16  123.9   8.0   91    1-92    182-304 (343)
144 cd06638 STKc_myosinIIIA Cataly  99.2 2.9E-11 6.2E-16  119.8   7.4   88    1-89    191-286 (286)
145 cd07845 STKc_CDK10 Catalytic d  99.2 3.7E-11 7.9E-16  121.3   8.3   91    1-92    175-296 (309)
146 KOG0597 Serine-threonine prote  99.2 1.4E-11 3.1E-16  134.1   5.6   89    1-92    167-257 (808)
147 cd06658 STKc_PAK5 Catalytic do  99.2 3.5E-11 7.5E-16  121.3   8.1   94    1-95    185-281 (292)
148 cd08216 PK_STRAD Pseudokinase   99.2 2.1E-11 4.6E-16  122.8   6.5   92    1-92    175-301 (314)
149 cd07832 STKc_CCRK Catalytic do  99.2 4.4E-11 9.5E-16  118.0   8.5   89    1-90    167-286 (286)
150 cd07854 STKc_MAPK4_6 Catalytic  99.2 4.4E-11 9.4E-16  123.4   8.8   91    1-92    185-306 (342)
151 cd05609 STKc_MAST Catalytic do  99.2 4.8E-11   1E-15  120.4   8.9   95    1-96    183-283 (305)
152 cd06626 STKc_MEKK4 Catalytic d  99.2 5.9E-11 1.3E-15  115.5   9.1   89    1-89    170-264 (264)
153 PHA03207 serine/threonine kina  99.2 3.4E-11 7.4E-16  127.1   7.7   94    1-94    254-383 (392)
154 cd06633 STKc_TAO3 Catalytic do  99.2 5.6E-11 1.2E-15  120.9   9.0   93    1-94    184-281 (313)
155 cd05586 STKc_Sck1_like Catalyt  99.2   1E-11 2.2E-16  127.0   3.6   92    1-94    163-261 (330)
156 cd06917 STKc_NAK1_like Catalyt  99.2 3.6E-11 7.9E-16  118.5   7.3   92    1-93    168-262 (277)
157 cd05582 STKc_RSK_N N-terminal   99.2 1.2E-11 2.7E-16  125.8   4.1   92    1-95    165-263 (318)
158 cd06620 PKc_MAPKK_Byr1_like Ca  99.2 5.5E-11 1.2E-15  118.4   8.6   92    1-92    169-272 (284)
159 PTZ00283 serine/threonine prot  99.2 3.2E-11   7E-16  132.2   7.5   90    1-92    212-303 (496)
160 cd05602 STKc_SGK1 Catalytic do  99.2 2.6E-11 5.7E-16  124.0   6.4   92    1-95    163-260 (325)
161 cd05122 PKc_STE Catalytic doma  99.2   6E-11 1.3E-15  113.2   8.3   87    1-88    164-253 (253)
162 cd05604 STKc_SGK3 Catalytic do  99.2 2.1E-11 4.6E-16  124.6   5.5   91    1-94    163-259 (325)
163 cd06659 STKc_PAK6 Catalytic do  99.2 5.6E-11 1.2E-15  120.0   8.5   93    1-94    184-279 (297)
164 cd08226 PK_STRAD_beta Pseudoki  99.2 2.2E-11 4.8E-16  124.5   5.6   92    1-92    175-314 (328)
165 cd06653 STKc_MEKK3_like_1 Cata  99.2 7.7E-11 1.7E-15  115.8   9.2   88    1-89    176-264 (264)
166 cd06645 STKc_MAP4K3 Catalytic   99.2 5.5E-11 1.2E-15  116.6   7.9   87    1-88    173-267 (267)
167 cd05118 STKc_CMGC Catalytic do  99.2 5.5E-11 1.2E-15  116.9   7.9   89    1-89    165-283 (283)
168 KOG0596 Dual specificity; seri  99.2 2.5E-11 5.4E-16  132.1   5.8   91    1-91    528-632 (677)
169 cd05610 STKc_MASTL Catalytic d  99.2 3.6E-11 7.8E-16  136.4   7.3   92    1-93    547-641 (669)
170 KOG0192 Tyrosine kinase specif  99.2   6E-11 1.3E-15  125.8   8.5   82    1-84    211-297 (362)
171 cd07833 STKc_CDKL Catalytic do  99.2 7.5E-11 1.6E-15  116.5   8.6   89    1-89    168-288 (288)
172 cd08215 STKc_Nek Catalytic dom  99.2 8.2E-11 1.8E-15  113.1   8.6   87    1-89    170-258 (258)
173 cd06613 STKc_MAP4K3_like Catal  99.2 5.5E-11 1.2E-15  115.6   7.4   87    1-88    168-262 (262)
174 cd06632 STKc_MEKK1_plant Catal  99.2 7.9E-11 1.7E-15  114.0   8.4   88    1-89    168-258 (258)
175 cd05603 STKc_SGK2 Catalytic do  99.2 3.8E-11 8.2E-16  122.4   6.4   92    1-95    163-260 (321)
176 cd06621 PKc_MAPKK_Pek1_like Ca  99.2 7.5E-11 1.6E-15  117.8   8.3   93    1-93    170-273 (287)
177 cd06634 STKc_TAO2 Catalytic do  99.2 8.5E-11 1.8E-15  119.1   8.8   93    1-94    178-275 (308)
178 PLN00009 cyclin-dependent kina  99.2 5.2E-11 1.1E-15  118.9   7.1   93    1-93    170-291 (294)
179 cd07838 STKc_CDK4_6_like Catal  99.1 6.7E-11 1.4E-15  116.6   7.6   88    1-89    173-287 (287)
180 cd05621 STKc_ROCK2 Catalytic d  99.1 5.9E-11 1.3E-15  124.8   7.7   94    1-95    210-313 (370)
181 cd06640 STKc_MST4 Catalytic do  99.1   5E-11 1.1E-15  118.2   6.8   92    1-94    168-261 (277)
182 cd05622 STKc_ROCK1 Catalytic d  99.1 6.4E-11 1.4E-15  124.4   7.9   93    1-94    210-312 (371)
183 cd07865 STKc_CDK9 Catalytic do  99.1 8.5E-11 1.8E-15  117.3   8.4   88    1-89    190-310 (310)
184 PHA03209 serine/threonine kina  99.1 6.8E-11 1.5E-15  123.1   8.0   91    1-91    223-356 (357)
185 cd06629 STKc_MAPKKK_Bck1_like   99.1 8.3E-11 1.8E-15  115.7   8.1   88    1-89    177-272 (272)
186 KOG0577 Serine/threonine prote  99.1 4.3E-11 9.4E-16  130.9   6.5   97    1-98    189-290 (948)
187 KOG0690 Serine/threonine prote  99.1 4.5E-11 9.8E-16  123.5   6.3   95    1-98    335-436 (516)
188 cd06615 PKc_MEK Catalytic doma  99.1 7.6E-11 1.6E-15  119.5   7.9   91    1-92    165-293 (308)
189 cd05577 STKc_GRK Catalytic dom  99.1 6.4E-11 1.4E-15  117.5   7.2   93    1-95    161-263 (277)
190 cd08222 STKc_Nek11 Catalytic d  99.1 9.6E-11 2.1E-15  114.5   8.3   87    1-89    172-260 (260)
191 cd07866 STKc_BUR1 Catalytic do  99.1 9.5E-11 2.1E-15  117.1   8.4   88    1-89    193-311 (311)
192 cd07879 STKc_p38delta_MAPK13 C  99.1 8.2E-11 1.8E-15  121.4   8.0   92    1-93    181-304 (342)
193 cd05580 STKc_PKA Catalytic dom  99.1   1E-10 2.2E-15  117.0   8.4   92    1-95    165-263 (290)
194 cd05623 STKc_MRCK_alpha Cataly  99.1 7.4E-11 1.6E-15  121.2   7.6   94    1-95    170-275 (332)
195 cd07846 STKc_CDKL2_3 Catalytic  99.1 9.9E-11 2.2E-15  115.7   8.2   88    1-89    167-286 (286)
196 cd05578 STKc_Yank1 Catalytic d  99.1 7.5E-11 1.6E-15  115.1   7.2   87    1-89    166-258 (258)
197 cd07843 STKc_CDC2L1 Catalytic   99.1 1.2E-10 2.7E-15  116.1   8.7   88    1-89    173-293 (293)
198 cd07836 STKc_Pho85 Catalytic d  99.1 9.9E-11 2.1E-15  115.6   7.9   88    1-89    167-284 (284)
199 PHA03212 serine/threonine kina  99.1 8.1E-11 1.7E-15  125.0   7.8   92    1-92    250-382 (391)
200 cd07851 STKc_p38 Catalytic dom  99.1 9.9E-11 2.1E-15  120.8   8.1   92    1-93    182-305 (343)
201 cd06622 PKc_MAPKK_PBS2_like Ca  99.1 1.4E-10 2.9E-15  115.2   8.8   91    1-93    168-269 (286)
202 cd05632 STKc_GRK5 Catalytic do  99.1 8.7E-11 1.9E-15  117.6   7.4   93    1-95    168-270 (285)
203 PTZ00267 NIMA-related protein   99.1 7.4E-11 1.6E-15  128.3   7.5   89    1-91    238-328 (478)
204 cd08221 STKc_Nek9 Catalytic do  99.1 1.6E-10 3.4E-15  112.5   9.0   87    1-89    168-256 (256)
205 cd07849 STKc_ERK1_2_like Catal  99.1 1.3E-10 2.9E-15  119.2   8.8   92    1-93    176-299 (336)
206 KOG0574 STE20-like serine/thre  99.1   1E-11 2.2E-16  127.1   0.4   97    1-98    196-295 (502)
207 cd06657 STKc_PAK4 Catalytic do  99.1 1.5E-10 3.3E-15  116.8   8.8   93    1-94    183-278 (292)
208 cd06642 STKc_STK25-YSK1 Cataly  99.1 6.7E-11 1.5E-15  117.1   6.1   91    1-93    168-260 (277)
209 PTZ00024 cyclin-dependent prot  99.1 1.6E-10 3.4E-15  118.2   8.8   92    1-93    200-320 (335)
210 cd06635 STKc_TAO1 Catalytic do  99.1 1.7E-10 3.6E-15  117.4   9.0   93    1-94    188-285 (317)
211 cd07850 STKc_JNK Catalytic dom  99.1 9.3E-11   2E-15  121.3   7.2   90    1-91    184-316 (353)
212 cd05048 PTKc_Ror Catalytic Dom  99.1 1.1E-10 2.5E-15  115.4   7.4   84    1-86    193-279 (283)
213 KOG0696 Serine/threonine prote  99.1 1.1E-10 2.4E-15  123.6   7.4   93    1-96    517-616 (683)
214 cd07870 STKc_PFTAIRE2 Catalyti  99.1 1.7E-10 3.7E-15  115.0   8.4   89    1-89    170-291 (291)
215 cd05581 STKc_PDK1 Catalytic do  99.1 1.6E-10 3.5E-15  113.2   8.0   86    1-89    189-280 (280)
216 cd05102 PTKc_VEGFR3 Catalytic   99.1 1.5E-10 3.3E-15  118.4   8.1   84    1-85    243-329 (338)
217 smart00220 S_TKc Serine/Threon  99.1 2.2E-10 4.8E-15  108.2   8.4   89    1-89    153-244 (244)
218 PF00069 Pkinase:  Protein kina  99.1 4.5E-11 9.7E-16  115.9   3.8   89    1-89    165-260 (260)
219 cd07834 STKc_MAPK Catalytic do  99.1 1.5E-10 3.3E-15  117.6   7.8   91    1-92    173-295 (330)
220 KOG0661 MAPK related serine/th  99.1 1.7E-10 3.7E-15  123.9   8.3   92    2-93    177-298 (538)
221 cd05597 STKc_DMPK_like Catalyt  99.1 1.7E-10 3.8E-15  118.6   8.2   93    1-94    170-274 (331)
222 cd07830 STKc_MAK_like Catalyti  99.1 2.6E-10 5.6E-15  112.6   9.1   89    1-89    165-283 (283)
223 cd06641 STKc_MST3 Catalytic do  99.1 1.6E-10 3.5E-15  114.6   7.6   90    1-92    168-259 (277)
224 cd07844 STKc_PCTAIRE_like Cata  99.1 1.6E-10 3.4E-15  115.1   7.5   89    1-89    170-291 (291)
225 cd08530 STKc_CNK2-like Catalyt  99.1 2.2E-10 4.9E-15  110.7   8.3   87    1-89    168-256 (256)
226 KOG0614 cGMP-dependent protein  99.1 1.3E-10 2.9E-15  125.5   7.2   95    1-96    586-687 (732)
227 PHA03211 serine/threonine kina  99.1 1.5E-10 3.3E-15  126.2   7.8   91    1-91    329-460 (461)
228 cd07841 STKc_CDK7 Catalytic do  99.1 1.9E-10   4E-15  114.9   7.6   92    1-93    169-289 (298)
229 PTZ00266 NIMA-related protein   99.1 1.4E-10 2.9E-15  135.9   7.5   91    1-93    208-302 (1021)
230 cd07855 STKc_ERK5 Catalytic do  99.1 1.7E-10 3.6E-15  118.3   7.4   91    1-92    178-300 (334)
231 cd05049 PTKc_Trk Catalytic dom  99.1 2.6E-10 5.6E-15  112.5   8.2   83    1-85    191-276 (280)
232 cd05061 PTKc_InsR Catalytic do  99.1 2.8E-10 6.1E-15  113.7   8.5   92    1-94    188-288 (288)
233 cd05123 STKc_AGC Catalytic dom  99.1 2.6E-10 5.7E-15  110.1   7.9   86    1-89    160-250 (250)
234 cd07858 STKc_TEY_MAPK_plant Ca  99.1 2.3E-10 4.9E-15  117.6   7.9   91    1-92    175-297 (337)
235 KOG4645 MAPKKK (MAP kinase kin  99.1 2.9E-11 6.3E-16  141.1   1.4   91    1-92   1405-1500(1509)
236 cd07829 STKc_CDK_like Catalyti  99.1 2.7E-10 5.8E-15  112.0   7.9   88    1-89    165-282 (282)
237 cd06646 STKc_MAP4K5 Catalytic   99.1 1.6E-10 3.6E-15  113.3   6.3   87    1-88    173-267 (267)
238 cd05036 PTKc_ALK_LTK Catalytic  99.1 2.6E-10 5.6E-15  113.1   7.6   84    1-86    188-274 (277)
239 cd06627 STKc_Cdc7_like Catalyt  99.1 3.8E-10 8.2E-15  108.8   8.5   87    1-89    166-254 (254)
240 KOG0667 Dual-specificity tyros  99.1 1.8E-10 3.8E-15  127.3   6.8   91    2-92    356-508 (586)
241 cd07840 STKc_CDK9_like Catalyt  99.1 3.3E-10 7.1E-15  111.4   8.1   88    1-89    168-287 (287)
242 cd07842 STKc_CDK8_like Catalyt  99.1 2.6E-10 5.6E-15  114.4   7.3   89    1-89    182-316 (316)
243 cd05576 STKc_RPK118_like Catal  99.1 1.9E-10   4E-15  112.1   6.0   82    1-89    149-237 (237)
244 cd07864 STKc_CDK12 Catalytic d  99.1 4.1E-10 8.8E-15  112.5   8.5   88    1-89    184-302 (302)
245 KOG0593 Predicted protein kina  99.1 2.3E-10 5.1E-15  117.5   6.8   89    2-90    169-288 (396)
246 KOG0591 NIMA (never in mitosis  99.0 2.3E-10   5E-15  116.6   6.3   79    1-80    195-275 (375)
247 cd07852 STKc_MAPK15 Catalytic   99.0 4.1E-10 8.9E-15  115.4   8.3   91    1-92    179-301 (337)
248 cd05624 STKc_MRCK_beta Catalyt  99.0 2.3E-10 4.9E-15  117.7   6.2   94    1-95    170-275 (331)
249 cd05114 PTKc_Tec_Rlk Catalytic  99.0 6.5E-10 1.4E-14  108.6   8.2   83    1-85    168-253 (256)
250 KOG0986 G protein-coupled rece  99.0 1.7E-10 3.8E-15  123.3   4.4   94    1-96    353-456 (591)
251 cd05116 PTKc_Syk Catalytic dom  99.0 6.9E-10 1.5E-14  108.7   8.2   83    1-85    165-250 (257)
252 cd08219 STKc_Nek3 Catalytic do  99.0   4E-10 8.7E-15  109.8   6.4   84    1-86    167-252 (255)
253 cd08228 STKc_Nek6 Catalytic do  99.0 6.2E-10 1.3E-14  109.0   7.6   85    1-85    173-260 (267)
254 cd05052 PTKc_Abl Catalytic dom  99.0   8E-10 1.7E-14  108.6   8.2   83    1-85    172-257 (263)
255 KOG0197 Tyrosine kinases [Sign  99.0 5.3E-10 1.1E-14  121.1   7.4   82    1-84    371-455 (468)
256 cd07857 STKc_MPK1 Catalytic do  99.0 6.8E-10 1.5E-14  113.7   7.9   91    1-92    176-298 (332)
257 cd05054 PTKc_VEGFR Catalytic d  99.0 5.8E-10 1.3E-14  115.4   7.5   85    1-86    242-329 (337)
258 KOG1006 Mitogen-activated prot  99.0 1.7E-10 3.7E-15  116.8   3.3   92    1-92    234-333 (361)
259 KOG0589 Serine/threonine prote  99.0 4.6E-10 9.9E-15  120.7   6.8   89    1-91    173-263 (426)
260 cd05089 PTKc_Tie1 Catalytic do  99.0 7.5E-10 1.6E-14  111.3   7.9   84    1-86    185-271 (297)
261 cd05093 PTKc_TrkB Catalytic do  99.0 7.5E-10 1.6E-14  110.6   7.8   82    1-84    189-273 (288)
262 KOG0580 Serine/threonine prote  99.0 5.4E-10 1.2E-14  111.7   6.6   88    1-91    189-278 (281)
263 cd05035 PTKc_Axl_like Catalyti  99.0 8.1E-10 1.7E-14  108.1   7.9   84    1-86    182-268 (273)
264 KOG0585 Ca2+/calmodulin-depend  99.0 5.2E-10 1.1E-14  120.2   6.7   92    1-93    282-379 (576)
265 cd05064 PTKc_EphR_A10 Catalyti  99.0 8.5E-10 1.8E-14  109.0   7.8   83    1-85    175-260 (266)
266 cd07877 STKc_p38alpha_MAPK14 C  99.0 6.3E-10 1.4E-14  115.1   7.0   91    1-92    184-306 (345)
267 cd05094 PTKc_TrkC Catalytic do  99.0 9.7E-10 2.1E-14  110.0   7.9   83    1-85    192-277 (291)
268 KOG0658 Glycogen synthase kina  99.0 6.3E-10 1.4E-14  116.3   6.7   92    2-93    193-313 (364)
269 cd05060 PTKc_Syk_like Catalyti  99.0 1.2E-09 2.5E-14  106.9   8.2   83    1-85    165-250 (257)
270 cd05062 PTKc_IGF-1R Catalytic   99.0 9.6E-10 2.1E-14  108.9   7.6   84    1-86    188-274 (277)
271 cd00192 PTKc Catalytic domain   99.0 1.1E-09 2.4E-14  105.5   7.8   84    1-86    174-260 (262)
272 cd05583 STKc_MSK_N N-terminal   99.0 1.1E-09 2.4E-14  109.0   8.1   93    1-95    173-275 (288)
273 cd05106 PTKc_CSF-1R Catalytic   99.0 7.8E-10 1.7E-14  116.4   7.3   84    1-85    281-367 (374)
274 cd07880 STKc_p38gamma_MAPK12 C  99.0   9E-10 1.9E-14  113.8   7.5   91    1-92    182-304 (343)
275 cd08229 STKc_Nek7 Catalytic do  99.0   1E-09 2.3E-14  107.4   7.6   84    1-84    173-259 (267)
276 cd05072 PTKc_Lyn Catalytic dom  99.0 1.2E-09 2.6E-14  106.8   7.9   83    1-85    171-256 (261)
277 cd05091 PTKc_Ror2 Catalytic do  99.0 1.3E-09 2.9E-14  108.0   8.3   83    1-85    193-278 (283)
278 KOG1026 Nerve growth factor re  99.0 6.5E-10 1.4E-14  125.8   6.6   82    1-84    672-756 (774)
279 cd05613 STKc_MSK1_N N-terminal  99.0 1.2E-09 2.5E-14  109.0   7.6   93    1-95    173-277 (290)
280 cd05090 PTKc_Ror1 Catalytic do  99.0 1.3E-09 2.9E-14  108.2   7.9   84    1-86    193-279 (283)
281 cd07856 STKc_Sty1_Hog1 Catalyt  99.0 1.5E-09 3.2E-14  111.7   8.4   91    1-92    172-294 (328)
282 PF07714 Pkinase_Tyr:  Protein   99.0 5.2E-10 1.1E-14  110.7   4.7   83    1-85    172-257 (259)
283 cd05040 PTKc_Ack_like Catalyti  99.0 1.8E-09 3.9E-14  105.2   8.3   84    1-85    167-253 (257)
284 cd05075 PTKc_Axl Catalytic dom  98.9 1.4E-09 3.1E-14  106.7   7.6   84    1-86    181-267 (272)
285 cd05092 PTKc_TrkA Catalytic do  98.9 1.5E-09 3.2E-14  108.1   7.8   83    1-85    191-276 (280)
286 PHA03210 serine/threonine kina  98.9 1.3E-09 2.8E-14  119.6   8.1   93    1-93    335-461 (501)
287 cd05055 PTKc_PDGFR Catalytic d  98.9 1.6E-09 3.5E-14  109.7   8.0   84    1-85    210-296 (302)
288 cd05104 PTKc_Kit Catalytic dom  98.9 1.5E-09 3.3E-14  114.1   8.0   84    1-85    283-369 (375)
289 cd05050 PTKc_Musk Catalytic do  98.9 1.7E-09 3.7E-14  107.6   8.0   83    1-85    199-284 (288)
290 cd08224 STKc_Nek6_Nek7 Catalyt  98.9 1.8E-09 3.9E-14  105.3   7.9   85    1-85    173-260 (267)
291 cd05044 PTKc_c-ros Catalytic d  98.9 1.8E-09   4E-14  105.8   7.9   83    1-85    180-265 (269)
292 cd05043 PTK_Ryk Pseudokinase d  98.9 1.6E-09 3.5E-14  107.3   7.6   83    1-85    186-271 (280)
293 cd05113 PTKc_Btk_Bmx Catalytic  98.9 1.6E-09 3.6E-14  106.3   7.6   84    1-86    168-254 (256)
294 cd05032 PTKc_InsR_like Catalyt  98.9 1.7E-09 3.8E-14  106.4   7.8   83    1-85    188-273 (277)
295 PLN00181 protein SPA1-RELATED;  98.9 7.6E-10 1.6E-14  127.6   6.0   88    1-92    182-271 (793)
296 cd05058 PTKc_Met_Ron Catalytic  98.9   2E-09 4.2E-14  105.2   7.8   83    1-85    169-254 (262)
297 cd05053 PTKc_FGFR Catalytic do  98.9 1.4E-09   3E-14  108.4   6.9   84    1-86    201-287 (293)
298 cd08528 STKc_Nek10 Catalytic d  98.9 1.9E-09 4.2E-14  105.8   7.8   84    1-85    180-265 (269)
299 cd05067 PTKc_Lck_Blk Catalytic  98.9 2.2E-09 4.7E-14  105.2   8.1   83    1-85    170-255 (260)
300 cd05082 PTKc_Csk Catalytic dom  98.9 2.1E-09 4.5E-14  105.0   7.8   83    1-85    166-251 (256)
301 cd05070 PTKc_Fyn_Yrk Catalytic  98.9 2.4E-09 5.1E-14  104.9   8.2   82    1-84    170-254 (260)
302 cd05059 PTKc_Tec_like Catalyti  98.9 2.3E-09   5E-14  104.9   7.9   84    1-86    168-254 (256)
303 cd05148 PTKc_Srm_Brk Catalytic  98.9 2.3E-09   5E-14  104.6   7.8   83    1-85    171-256 (261)
304 cd05063 PTKc_EphR_A2 Catalytic  98.9 2.5E-09 5.3E-14  105.0   7.9   83    1-85    177-262 (268)
305 cd05068 PTKc_Frk_like Catalyti  98.9 3.5E-09 7.6E-14  103.7   8.9   83    1-85    171-256 (261)
306 cd05085 PTKc_Fer Catalytic dom  98.9 2.8E-09 6.1E-14  103.3   8.1   83    1-85    161-246 (250)
307 KOG0663 Protein kinase PITSLRE  98.9 2.4E-09 5.2E-14  111.3   7.9   91    2-92    245-367 (419)
308 cd05041 PTKc_Fes_like Catalyti  98.9 2.9E-09 6.4E-14  103.3   8.2   83    1-85    162-247 (251)
309 KOG0595 Serine/threonine-prote  98.9 1.2E-09 2.7E-14  115.5   5.9   91    1-92    181-274 (429)
310 cd05084 PTKc_Fes Catalytic dom  98.9 2.6E-09 5.5E-14  104.0   7.6   83    1-85    163-248 (252)
311 KOG0659 Cdk activating kinase   98.9 2.5E-09 5.5E-14  108.3   7.6   91    2-92    169-287 (318)
312 cd05087 PTKc_Aatyk1_Aatyk3 Cat  98.9 3.2E-09 6.8E-14  104.7   8.2   85    1-85    169-265 (269)
313 KOG0671 LAMMER dual specificit  98.9 3.4E-10 7.3E-15  118.9   1.4   90    2-92    277-412 (415)
314 KOG0600 Cdc2-related protein k  98.9 2.2E-09 4.7E-14  116.2   7.4   91    2-92    287-406 (560)
315 cd05098 PTKc_FGFR1 Catalytic d  98.9 2.5E-09 5.4E-14  108.1   7.4   84    1-86    209-295 (307)
316 KOG1093 Predicted protein kina  98.9 5.1E-10 1.1E-14  121.9   2.4  245   11-278   109-388 (725)
317 cd05115 PTKc_Zap-70 Catalytic   98.9 3.1E-09 6.7E-14  104.7   7.8   83    1-85    165-250 (257)
318 cd05112 PTKc_Itk Catalytic dom  98.9 2.9E-09 6.4E-14  103.6   7.5   84    1-86    168-254 (256)
319 cd05056 PTKc_FAK Catalytic dom  98.9 3.7E-09   8E-14  104.1   8.2   83    1-85    175-260 (270)
320 cd05099 PTKc_FGFR4 Catalytic d  98.9 3.3E-09 7.2E-14  107.6   8.1   83    1-85    203-288 (314)
321 cd05047 PTKc_Tie Catalytic dom  98.9 2.9E-09 6.3E-14  105.2   7.4   83    1-85    178-263 (270)
322 cd05069 PTKc_Yes Catalytic dom  98.9 3.4E-09 7.3E-14  104.0   7.8   83    1-85    170-255 (260)
323 cd05033 PTKc_EphR Catalytic do  98.9 3.5E-09 7.5E-14  104.1   7.9   84    1-86    175-261 (266)
324 cd05111 PTK_HER3 Pseudokinase   98.9 3.8E-09 8.2E-14  105.3   8.3   83    1-85    178-263 (279)
325 cd05045 PTKc_RET Catalytic dom  98.9 3.7E-09   8E-14  105.6   7.8   83    1-85    196-281 (290)
326 cd05078 PTK_Jak2_Jak3_rpt1 Pse  98.9 3.5E-09 7.5E-14  104.0   7.3   82    1-86    171-256 (258)
327 cd05109 PTKc_HER2 Catalytic do  98.9 4.4E-09 9.5E-14  104.2   8.0   83    1-85    178-263 (279)
328 cd05088 PTKc_Tie2 Catalytic do  98.9   3E-09 6.6E-14  107.6   6.7   84    1-86    190-276 (303)
329 cd05108 PTKc_EGFR Catalytic do  98.9 3.7E-09   8E-14  107.4   7.3   84    1-86    178-264 (316)
330 cd05046 PTK_CCK4 Pseudokinase   98.9 5.1E-09 1.1E-13  103.2   8.1   85    1-86    185-272 (275)
331 cd05101 PTKc_FGFR2 Catalytic d  98.9 5.4E-09 1.2E-13  105.3   8.1   84    1-86    206-292 (304)
332 cd05071 PTKc_Src Catalytic dom  98.9 5.7E-09 1.2E-13  102.9   8.0   83    1-85    170-255 (262)
333 cd05051 PTKc_DDR Catalytic dom  98.9 5.6E-09 1.2E-13  104.0   7.9   84    1-85    199-292 (296)
334 smart00219 TyrKc Tyrosine kina  98.9 6.6E-09 1.4E-13  100.4   8.2   83    1-85    171-256 (258)
335 KOG0608 Warts/lats-like serine  98.9 1.3E-09 2.9E-14  120.2   3.7   95    1-96    838-938 (1034)
336 cd05039 PTKc_Csk_like Catalyti  98.9 6.8E-09 1.5E-13  101.2   8.3   83    1-85    166-251 (256)
337 cd05100 PTKc_FGFR3 Catalytic d  98.8 5.1E-09 1.1E-13  107.4   7.6   84    1-86    203-289 (334)
338 KOG0193 Serine/threonine prote  98.8 1.4E-09 3.1E-14  119.5   3.6   84    1-85    557-648 (678)
339 cd05073 PTKc_Hck Catalytic dom  98.8 7.6E-09 1.7E-13  101.5   8.1   82    1-84    170-254 (260)
340 cd05034 PTKc_Src_like Catalyti  98.8 7.4E-09 1.6E-13  101.0   8.0   82    1-84    171-255 (261)
341 KOG0200 Fibroblast/platelet-de  98.8 6.1E-09 1.3E-13  117.4   8.3   83    1-84    488-573 (609)
342 cd05083 PTKc_Chk Catalytic dom  98.8 6.9E-09 1.5E-13  101.3   7.6   83    1-85    164-249 (254)
343 cd05096 PTKc_DDR1 Catalytic do  98.8 7.3E-09 1.6E-13  104.3   7.6   83    1-84    207-299 (304)
344 KOG1095 Protein tyrosine kinas  98.8 5.6E-09 1.2E-13  121.9   7.5   83    1-85    871-956 (1025)
345 cd05066 PTKc_EphR_A Catalytic   98.8 8.3E-09 1.8E-13  101.6   7.7   83    1-85    176-261 (267)
346 PHA02882 putative serine/threo  98.8 4.6E-09   1E-13  106.0   6.0   82    1-85    200-291 (294)
347 cd05065 PTKc_EphR_B Catalytic   98.8 7.5E-09 1.6E-13  101.8   7.4   83    1-85    178-263 (269)
348 cd05042 PTKc_Aatyk Catalytic d  98.8 8.7E-09 1.9E-13  101.4   7.7   85    1-85    169-265 (269)
349 cd05077 PTK_Jak1_rpt1 Pseudoki  98.8 6.7E-09 1.5E-13  102.7   6.6   82    1-86    175-260 (262)
350 cd05103 PTKc_VEGFR2 Catalytic   98.8 8.5E-09 1.8E-13  106.6   7.3   85    1-86    248-335 (343)
351 cd05080 PTKc_Tyk2_rpt2 Catalyt  98.8 1.2E-08 2.5E-13  101.5   7.7   84    1-85    177-276 (283)
352 PLN03225 Serine/threonine-prot  98.8 9.5E-09 2.1E-13  114.9   7.8   83   10-94    356-458 (566)
353 KOG0594 Protein kinase PCTAIRE  98.8 1.4E-08 3.1E-13  105.6   8.2   92    2-93    188-309 (323)
354 cd05057 PTKc_EGFR_like Catalyt  98.8 1.4E-08   3E-13  100.7   7.9   83    1-85    178-263 (279)
355 cd05105 PTKc_PDGFR_alpha Catal  98.8   1E-08 2.2E-13  109.6   7.4   84    1-85    306-392 (400)
356 cd05074 PTKc_Tyro3 Catalytic d  98.8 1.3E-08 2.8E-13  100.0   7.6   83    1-85    182-267 (273)
357 cd05097 PTKc_DDR_like Catalyti  98.8 1.5E-08 3.2E-13  101.6   8.1   84    1-85    198-291 (295)
358 cd05086 PTKc_Aatyk2 Catalytic   98.8 1.9E-08 4.1E-13   99.5   8.7   84    1-85    168-264 (268)
359 cd05110 PTKc_HER4 Catalytic do  98.8 1.4E-08   3E-13  102.6   7.6   84    1-86    178-264 (303)
360 cd05095 PTKc_DDR2 Catalytic do  98.8 1.6E-08 3.5E-13  101.4   7.8   84    1-85    199-292 (296)
361 cd05076 PTK_Tyk2_rpt1 Pseudoki  98.8 1.4E-08 3.1E-13  101.2   7.3   82    1-86    187-272 (274)
362 cd05107 PTKc_PDGFR_beta Cataly  98.7 1.7E-08 3.6E-13  108.1   7.5   85    1-86    308-395 (401)
363 KOG2345 Serine/threonine prote  98.7   5E-09 1.1E-13  105.4   2.3   85    2-86    206-296 (302)
364 KOG1024 Receptor-like protein   98.7 3.2E-08 6.9E-13  104.8   7.3   83    1-85    465-550 (563)
365 KOG0670 U4/U6-associated splic  98.7 5.5E-09 1.2E-13  113.4   1.6   89    2-91    603-751 (752)
366 cd05079 PTKc_Jak1_rpt2 Catalyt  98.7 3.7E-08   8E-13   98.1   6.7   85    1-86    179-279 (284)
367 KOG4236 Serine/threonine prote  98.6   3E-09 6.6E-14  115.5  -1.4   97    1-100   733-833 (888)
368 cd05037 PTK_Jak_rpt1 Pseudokin  98.6   5E-08 1.1E-12   94.7   7.1   81    1-85    171-256 (259)
369 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  98.6 5.6E-08 1.2E-12   96.4   7.3   84    1-85    178-278 (284)
370 KOG1290 Serine/threonine prote  98.6 3.4E-08 7.4E-13  106.7   5.5   92    2-93    419-557 (590)
371 cd05038 PTKc_Jak_rpt2 Catalyti  98.6 5.3E-08 1.2E-12   95.8   6.5   84    1-85    179-278 (284)
372 KOG0587 Traf2- and Nck-interac  98.6 1.5E-08 3.3E-13  115.3   2.8   90    1-91    190-287 (953)
373 KOG0665 Jun-N-terminal kinase   98.6 5.4E-08 1.2E-12  100.8   6.0   89    2-90    185-314 (369)
374 KOG4257 Focal adhesion tyrosin  98.6 3.2E-08   7E-13  109.4   4.6   82    1-84    559-643 (974)
375 KOG1989 ARK protein kinase fam  98.6 3.2E-08 6.9E-13  112.5   4.6   80    2-86    223-307 (738)
376 KOG1035 eIF-2alpha kinase GCN2  98.6 6.7E-08 1.4E-12  113.2   6.7   88    1-91    782-876 (1351)
377 PLN03224 probable serine/threo  98.6 1.2E-07 2.6E-12  105.0   8.2   79   13-91    412-505 (507)
378 KOG0695 Serine/threonine prote  98.5 9.1E-08   2E-12   99.7   5.8   93    1-95    418-525 (593)
379 KOG0199 ACK and related non-re  98.5 8.1E-08 1.8E-12  107.4   5.6   89    2-92    283-374 (1039)
380 KOG0194 Protein tyrosine kinas  98.5 5.8E-08 1.3E-12  106.2   3.6   84    1-85    329-415 (474)
381 KOG0668 Casein kinase II, alph  98.5 2.4E-07 5.1E-12   92.8   7.4   91    2-92    200-328 (338)
382 PRK13184 pknD serine/threonine  98.5 1.2E-07 2.6E-12  110.9   6.2   85    1-85    198-284 (932)
383 KOG0666 Cyclin C-dependent kin  98.5   2E-07 4.3E-12   96.6   6.9   92    2-93    207-344 (438)
384 PLN00113 leucine-rich repeat r  98.5 1.1E-07 2.4E-12  111.4   4.7   86    1-86    845-947 (968)
385 KOG4278 Protein tyrosine kinas  98.5 3.7E-07   8E-12  101.1   8.3   83    1-85    433-518 (1157)
386 KOG0669 Cyclin T-dependent kin  98.4 3.7E-07 7.9E-12   92.5   7.3   91    2-93    196-322 (376)
387 KOG0606 Microtubule-associated  98.4 3.8E-07 8.2E-12  106.0   6.7   97    1-99    225-328 (1205)
388 KOG0586 Serine/threonine prote  98.4 1.3E-07 2.9E-12  104.3   1.9   89    2-93    222-313 (596)
389 KOG1151 Tousled-like protein k  98.4   3E-07 6.4E-12   98.7   4.2   91    1-91    647-746 (775)
390 KOG0196 Tyrosine kinase, EPH (  98.3 2.7E-07 5.9E-12  104.3   2.0   84    1-86    801-887 (996)
391 KOG1027 Serine/threonine prote  98.3 2.5E-07 5.5E-12  105.1   1.6   87    1-90    681-771 (903)
392 KOG1167 Serine/threonine prote  98.2 6.5E-07 1.4E-11   95.4   3.8   91    2-92    245-387 (418)
393 KOG0984 Mitogen-activated prot  98.1 1.8E-06 3.8E-11   85.5   3.6   54    1-54    215-273 (282)
394 KOG0662 Cyclin-dependent kinas  98.1 6.7E-06 1.5E-10   80.0   7.2   91    2-92    169-289 (292)
395 KOG0611 Predicted serine/threo  98.1 7.3E-06 1.6E-10   87.5   7.1   85    2-90    220-307 (668)
396 KOG0576 Mitogen-activated prot  98.0 4.1E-06 8.8E-11   93.7   4.5   91    1-92    179-277 (829)
397 KOG1025 Epidermal growth facto  98.0 7.7E-06 1.7E-10   93.3   6.5   81    2-84    868-951 (1177)
398 KOG1094 Discoidin domain recep  98.0 6.3E-06 1.4E-10   91.2   5.2   84    1-85    706-799 (807)
399 KOG0590 Checkpoint kinase and   97.9 1.8E-06   4E-11   97.5  -0.3   93    1-93    491-592 (601)
400 KOG0603 Ribosomal protein S6 k  97.9 7.5E-06 1.6E-10   91.1   4.2   87    1-95    160-252 (612)
401 KOG0195 Integrin-linked kinase  97.9 1.5E-05 3.4E-10   81.6   5.1   82    1-84    353-440 (448)
402 KOG0664 Nemo-like MAPK-related  97.5 0.00016 3.5E-09   74.4   6.0   91    2-93    225-350 (449)
403 KOG1033 eIF-2alpha kinase PEK/  97.5 8.9E-05 1.9E-09   81.4   4.2   84    1-89    429-515 (516)
404 KOG1187 Serine/threonine prote  97.5 0.00023 5.1E-09   75.8   7.0   84    1-84    245-346 (361)
405 KOG0606 Microtubule-associated  97.4 0.00012 2.7E-09   85.7   5.1   95    1-96   1002-1102(1205)
406 KOG1023 Natriuretic peptide re  97.0   0.001 2.2E-08   73.5   5.8   84    1-84    118-218 (484)
407 KOG4158 BRPK/PTEN-induced prot  96.8  0.0011 2.4E-08   71.4   4.5   91    1-92    418-519 (598)
408 KOG1240 Protein kinase contain  96.8  0.0015 3.1E-08   77.4   5.2   81    1-86    194-291 (1431)
409 COG0515 SPS1 Serine/threonine   96.6  0.0079 1.7E-07   57.2   7.9   91    1-91    175-280 (384)
410 KOG4250 TANK binding protein k  96.5  0.0017 3.7E-08   73.7   3.0   35    1-35    190-226 (732)
411 KOG2052 Activin A type IB rece  96.1  0.0055 1.2E-07   66.7   4.5   83    1-84    387-497 (513)
412 PF14531 Kinase-like:  Kinase-l  95.3  0.0063 1.4E-07   63.3   0.9   62    9-77    226-288 (288)
413 KOG0590 Checkpoint kinase and   95.2  0.0051 1.1E-07   70.0  -0.2   91    1-91    196-291 (601)
414 KOG3653 Transforming growth fa  95.0   0.027 5.9E-07   61.8   4.8   81    1-81    385-494 (534)
415 PF12202 OSR1_C:  Oxidative-str  94.7    0.03 6.4E-07   41.2   2.7   32  184-215     1-38  (38)
416 KOG1345 Serine/threonine kinas  94.4    0.01 2.2E-07   61.5  -0.2   88    2-89    188-290 (378)
417 KOG1266 Protein kinase [Signal  93.1   0.056 1.2E-06   57.5   2.4   75   11-93    260-338 (458)
418 KOG2137 Protein kinase [Signal  85.2    0.35 7.6E-06   55.6   0.9   91    1-92    176-271 (700)
419 KOG0601 Cyclin-dependent kinas  82.1    0.91   2E-05   51.1   2.6   90    1-92    295-385 (524)
420 KOG0027 Calmodulin and related  78.9    0.53 1.1E-05   43.8  -0.5   92  117-214     6-104 (151)
421 COG5126 FRQ1 Ca2+-binding prot  78.4    0.27 5.8E-06   47.2  -2.7   97  111-214    12-111 (160)
422 PF00036 EF-hand_1:  EF hand;    69.4     1.4   3E-05   30.3  -0.2   21  120-140     1-21  (29)
423 cd00180 PKc Catalytic domain o  63.2     6.9 0.00015   35.3   3.0   27   61-87    188-215 (215)
424 KOG0028 Ca2+-binding protein (  59.4    0.71 1.5E-05   44.4  -4.2   93  116-214    30-125 (172)
425 PF13202 EF-hand_5:  EF hand; P  58.7     2.8 6.1E-05   27.7  -0.3   20  121-140     1-20  (25)
426 KOG0584 Serine/threonine prote  57.4      11 0.00024   43.2   3.9   58  183-240   318-379 (632)
427 KOG0031 Myosin regulatory ligh  56.0     2.3 4.9E-05   40.8  -1.4   87  113-211    26-117 (171)
428 COG4248 Uncharacterized protei  49.5      35 0.00077   38.2   6.0   72   10-81    198-291 (637)
429 PF13405 EF-hand_6:  EF-hand do  33.8      12 0.00026   25.4  -0.3   20  121-140     2-21  (31)
430 KOG1164 Casein kinase (serine/  30.5 1.6E+02  0.0036   30.4   7.4   29    9-37    213-241 (322)
431 PF04855 SNF5:  SNF5 / SMARCB1   27.6 1.6E+02  0.0034   30.3   6.4   65  181-246   113-179 (244)
432 KOG1035 eIF-2alpha kinase GCN2  25.2      67  0.0015   40.0   3.7   68   13-92    372-440 (1351)

No 1  
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00  E-value=1.2e-34  Score=314.08  Aligned_cols=293  Identities=49%  Similarity=0.690  Sum_probs=208.6

Q ss_pred             CCcccccccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcccCCCCCH
Q 008997            1 MAPEVYEEEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLATVSSRLSA   80 (547)
Q Consensus         1 MAPEVL~~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~dPskRpSa   80 (547)
                      ||||++.+.|+..+|||||||||+||+|+.+||.+|.++++||++|.+|.+|..+.++-+|++++||.+||...+.|+|+
T Consensus       211 MAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~~~~R~sa  290 (632)
T KOG0584|consen  211 MAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLATKSERLSA  290 (632)
T ss_pred             cChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcCchhccCH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCccccCCCCchhhhhhccccccccCchhhhhhhhhhhhhccCCCCCCCcccccccCCCCCCCCcccc--cchhh
Q 008997           81 RELLTDPFLQIDDYDSDLRMIQYQTDYDEISPLLRQSLYGIYHSNSSSNNGCGHYIGYDTENGLDYHPHEFQE--SEIDL  158 (547)
Q Consensus        81 ~ELLkHPff~~~~~~~~l~~l~~~~~~~~~~~l~~~p~~~l~~~f~~lD~d~sG~ls~de~l~~~l~~~e~e~--se~el  158 (547)
                      .|||+||||...+.-..+.+....... .+.  .........  +..  .-..+.+.++-    .+.....+.  .++..
T Consensus       291 ~eLL~d~Ff~~d~g~~~~~~e~d~~~~-~~~--~~~~~~~~~--~~~--~~~~n~i~~~~----~~~~D~~e~v~~em~~  359 (632)
T KOG0584|consen  291 KELLKDPFFDEDGGIVELAPEDDMSDP-ALS--LSLRDEDGK--KNK--RPKANAIQFDY----NLNTDESEEVAQEMVE  359 (632)
T ss_pred             HHHhhChhhccccccccccchhhcccc-ccc--ccccccchh--hcC--Cccccccccee----ecCCCchhHHHHHHHH
Confidence            999999999986542111111100000 000  000000000  000  11111111111    111111110  01111


Q ss_pred             hccc-cc------cccccccccccCcccccc-ceEEEeeecccccCcccccccccCCCCcHHHHHHHHHHccCCCcccHH
Q 008997          159 FTCQ-ED------EHLTNFDISIKGKRREDD-GIFLRLRIADKEGRIRNIYFPFDIQTDTALSVATEMVSELDITDQDVT  230 (547)
Q Consensus       159 ~~~~-e~------~~s~~~di~l~G~~~dd~-~v~L~LRi~dk~g~lr~i~fpFd~d~DTa~svA~EMV~Eldi~~qd~~  230 (547)
                      +... ++      .....+++.++|++.++. .++|.|||.+.+|+.|+|+|||++.+|||.+||.+||+|+++.+|.+.
T Consensus       360 ~~~~~edd~~~v~r~~~~~~~~ikgkr~~~~~~~~l~l~i~~~~g~~r~i~fpf~~~~dta~~Va~eMv~el~~~dq~v~  439 (632)
T KOG0584|consen  360 EEIVSEDDSREVARLLKDTVFSIKGKRNDRQTEISLELRIADEDGLVRNIHFPFDLEGDTAPSVAHEMVEELEITDQPVV  439 (632)
T ss_pred             hccCCcchHHHHHHHhccceeeechhhhcccccceeEeeccCCCCCcccccCCCcCCCcchhHHHHHHHhhcCCcccchh
Confidence            1100 00      113457889999997776 999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCCCccccCCCC------cccccCCCCC----CChhhhhccCCCCCCccccccccCC-ccccc
Q 008997          231 KIAEIIDSEIASLVPEWKRGMAMEESPHR------SSFCHNCASN----GCLPDYILSDGSGAKNLQVLQCSKD-GCAAI  299 (547)
Q Consensus       231 ~IaemI~~Ei~~~VP~w~rg~~wa~~~~l------l~v~~n~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  299 (547)
                      .||+||+.++.+++|.|+....-++++..      .+++.+|.+.    ++..+++-+   . ....+.+|+.+ .|+..
T Consensus       440 ~ia~mid~~i~~L~p~~~~~~~~~~s~~~~~~~~~~s~~~~~~s~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~  515 (632)
T KOG0584|consen  440 NIAEMIDGEISALVPNWKASTPNDESPHEQHTDNSVSIQRSSESATQSQKSFSSADPQ---Q-VAPFVQQSMEDPLSSDV  515 (632)
T ss_pred             hHHHHHhchhhhcCCccCCCCCccccchhccCcccccccCCCcccccccccccccccc---c-ccccccccccCCCcccc
Confidence            99999999999999999988655554332      5666666553    444444432   1 22234466665 89999


Q ss_pred             cccceeEEE
Q 008997          300 HGRFEEITY  308 (547)
Q Consensus       300 ~~~~~~~~~  308 (547)
                      |+||.....
T Consensus       516 ~~r~~~~~~  524 (632)
T KOG0584|consen  516 ESRFSKNEL  524 (632)
T ss_pred             ccccccccc
Confidence            999987654


No 2  
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.60  E-value=1.4e-15  Score=151.84  Aligned_cols=91  Identities=23%  Similarity=0.498  Sum_probs=84.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      |||||++ .+|+..+|||++||++|.|+.|.+||++.+ ...+|+.|+.+.+  +...|..+++++++||++||. +|++
T Consensus       179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~-~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~k  257 (355)
T KOG0033|consen  179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKK  257 (355)
T ss_pred             cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc-HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhh
Confidence            8999999 789999999999999999999999999854 6789999999876  566788999999999999999 7999


Q ss_pred             CCCHHHHhcCCccccC
Q 008997           77 RLSARELLTDPFLQID   92 (547)
Q Consensus        77 RpSa~ELLkHPff~~~   92 (547)
                      |.|+.|+|+|||++..
T Consensus       258 RIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  258 RITADEALKHPWICNR  273 (355)
T ss_pred             hccHHHHhCCchhcch
Confidence            9999999999999874


No 3  
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.59  E-value=1.4e-15  Score=164.82  Aligned_cols=101  Identities=35%  Similarity=0.572  Sum_probs=85.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||||+. ..|++++||||||++++||+-|++||-.......++..-..|...-..+..+|+.+++|+.+||+ ++.+|+
T Consensus       436 MAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ra  515 (550)
T KOG0578|consen  436 MAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRA  515 (550)
T ss_pred             cchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCC
Confidence            8999998 78999999999999999999999999875534445544456666555677899999999999999 799999


Q ss_pred             CHHHHhcCCccccCCCCchhhhh
Q 008997           79 SARELLTDPFLQIDDYDSDLRMI  101 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~~~l~~l  101 (547)
                      +|.+||.||||+.......|.|+
T Consensus       516 sA~eLL~HpFl~~a~p~ssL~pL  538 (550)
T KOG0578|consen  516 SAKELLEHPFLKMAKPESSLNPL  538 (550)
T ss_pred             CHHHHhcChhhhhcCCHHHhHHH
Confidence            99999999999877666666554


No 4  
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.56  E-value=4.1e-15  Score=160.48  Aligned_cols=96  Identities=26%  Similarity=0.404  Sum_probs=83.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~dPskR   77 (547)
                      |||||+. .+|+..||+||+|||+||||.|.+||.+. .+.+++++|.....  ..+.....+++++|||.+||.+|.+|
T Consensus       355 iAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~-tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~R  433 (550)
T KOG0605|consen  355 IAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSE-TPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLCDPENR  433 (550)
T ss_pred             cchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhcCHHHh
Confidence            8999998 78999999999999999999999999985 48999999988763  22222346899999999999999999


Q ss_pred             CC---HHHHhcCCccccCCCCch
Q 008997           78 LS---ARELLTDPFLQIDDYDSD   97 (547)
Q Consensus        78 pS---a~ELLkHPff~~~~~~~~   97 (547)
                      +.   +.||.+||||+..+|...
T Consensus       434 LG~~G~~EIK~HPfF~~v~W~~l  456 (550)
T KOG0605|consen  434 LGSKGAEEIKKHPFFKGVDWDHL  456 (550)
T ss_pred             cCcccHHHHhcCCccccCCcchh
Confidence            85   999999999999998753


No 5  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.52  E-value=1.6e-14  Score=150.35  Aligned_cols=93  Identities=30%  Similarity=0.506  Sum_probs=81.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCC----CchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSEC----THPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~----s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      ||||.+. +.|+.++||||||++++|+++|++||...    ....+++..|..+..|..+...+++++++||..||+ +|
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp  323 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDP  323 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCc
Confidence            8999999 68999999999999999999999999863    346788888888877765544599999999999999 59


Q ss_pred             CCCCCHHHHhcCCccccCC
Q 008997           75 SSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~~   93 (547)
                      ++|+++.||++|||++...
T Consensus       324 ~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  324 SERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             ccCCCHHHHhcCHHHhhcc
Confidence            9999999999999998653


No 6  
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48  E-value=1.3e-14  Score=153.77  Aligned_cols=94  Identities=31%  Similarity=0.485  Sum_probs=76.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||||+. ..|+.|+|||||||++|||++|.+||..+. +...+..|-+.. |+.+...+++.+++||..||. +|..||
T Consensus       178 MAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~h-PmrvlflIpk~~-PP~L~~~~S~~~kEFV~~CL~k~P~~Rp  255 (467)
T KOG0201|consen  178 MAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLH-PMRVLFLIPKSA-PPRLDGDFSPPFKEFVEACLDKNPEFRP  255 (467)
T ss_pred             cchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccC-cceEEEeccCCC-CCccccccCHHHHHHHHHHhhcCcccCc
Confidence            8999999 689999999999999999999999999865 443333333333 333445689999999999999 599999


Q ss_pred             CHHHHhcCCccccCCCCc
Q 008997           79 SARELLTDPFLQIDDYDS   96 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~~   96 (547)
                      +|.+||+|+|++......
T Consensus       256 sA~~LLKh~FIk~a~k~s  273 (467)
T KOG0201|consen  256 SAKELLKHKFIKRAKKTS  273 (467)
T ss_pred             CHHHHhhhHHHHhcCCch
Confidence            999999999999754433


No 7  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48  E-value=6.9e-15  Score=154.94  Aligned_cols=93  Identities=26%  Similarity=0.359  Sum_probs=81.5

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC--ccccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE--ALFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~--~l~~~~S~elkdLI~kCL~-d   73 (547)
                      +||||+.    ..|..++|+||+||++|.+++|.+||.+......+.+.|.+|.++.  ..|..++.++++||..||. +
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd  424 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD  424 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC
Confidence            5999998    2355699999999999999999999998766666889999998843  4577899999999999999 7


Q ss_pred             cCCCCCHHHHhcCCccccCC
Q 008997           74 VSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        74 PskRpSa~ELLkHPff~~~~   93 (547)
                      |+.||++.|+|+||||+...
T Consensus       425 P~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  425 PENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             cccCcCHHHHhcChhhhccc
Confidence            99999999999999999654


No 8  
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48  E-value=6.5e-14  Score=148.81  Aligned_cols=93  Identities=29%  Similarity=0.440  Sum_probs=77.3

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc--------cccCCCHHHHHHHHH
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA--------LFKVEDPEVRQFIEK   69 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~--------l~~~~S~elkdLI~k   69 (547)
                      |||||+.   .+|+.|+|||||||+..||++|..||.... +.+++..-+.+..|..        ..+..+..++.+|..
T Consensus       197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p-PmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~  275 (516)
T KOG0582|consen  197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP-PMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIAL  275 (516)
T ss_pred             cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC-hHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHH
Confidence            8999966   689999999999999999999999999854 6666655566655422        234467889999999


Q ss_pred             Hhc-ccCCCCCHHHHhcCCccccCCC
Q 008997           70 CLA-TVSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        70 CL~-dPskRpSa~ELLkHPff~~~~~   94 (547)
                      ||+ +|++||||.++|+|+||+....
T Consensus       276 CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  276 CLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             HhhcCcccCCCHHHHhccHHHhhccc
Confidence            999 6999999999999999997644


No 9  
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.46  E-value=6.8e-14  Score=145.63  Aligned_cols=96  Identities=30%  Similarity=0.491  Sum_probs=84.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+..||+||+|+++|||++|.+||.+. +...++.+|..++.+. ++...++++++|+.++|. +|++|+
T Consensus       192 mAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-~~~~~~~~I~~~k~~~-~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  192 MAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-DVKKMYDKILKGKLPL-PPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             cChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-cHHHHHHHHhcCcCCC-CCccCCHHHHHHHHHHhccCHHHhc
Confidence            8999998 89999999999999999999999999984 4789999999888432 334579999999999999 599996


Q ss_pred             ----CHHHHhcCCccccCCCCchh
Q 008997           79 ----SARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        79 ----Sa~ELLkHPff~~~~~~~~l   98 (547)
                          .+.++..||||...+|...+
T Consensus       270 g~~~d~~~ik~HpfF~~inW~~l~  293 (357)
T KOG0598|consen  270 GGPGDAEEIKRHPFFKGINWEKLL  293 (357)
T ss_pred             CCCCChHHhhcCcccccCCHHHHH
Confidence                58999999999999987554


No 10 
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.46  E-value=9.6e-14  Score=146.45  Aligned_cols=94  Identities=23%  Similarity=0.375  Sum_probs=80.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +||||+. .+.+.+||||.|||.+|||+.|..||.|.++ .+++..|+......+-.+.++-.++|||+++|. +|++|+
T Consensus       302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl  380 (459)
T KOG0610|consen  302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL  380 (459)
T ss_pred             ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence            5999999 7899999999999999999999999999764 556666665554333334678999999999999 599999


Q ss_pred             C----HHHHhcCCccccCCCC
Q 008997           79 S----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 S----a~ELLkHPff~~~~~~   95 (547)
                      .    |+||.+||||+..+|.
T Consensus       381 g~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  381 GSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             ccccchHHhhcCccccCCChh
Confidence            7    9999999999999997


No 11 
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.45  E-value=4.5e-14  Score=130.76  Aligned_cols=90  Identities=26%  Similarity=0.473  Sum_probs=69.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc-----cccCCCH--HHHHHHHHHhc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA-----LFKVEDP--EVRQFIEKCLA   72 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~-----l~~~~S~--elkdLI~kCL~   72 (547)
                      ||||++. ..|+.++|||||||++|||++|..||.........+..+..+..+..     ....++.  ++++||.+||.
T Consensus        71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~  150 (176)
T smart00750       71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCAS  150 (176)
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHh
Confidence            7999998 78999999999999999999999999765444445554444332211     1112233  68999999999


Q ss_pred             -ccCCCCCHHHHhcCCccc
Q 008997           73 -TVSSRLSARELLTDPFLQ   90 (547)
Q Consensus        73 -dPskRpSa~ELLkHPff~   90 (547)
                       +|.+||++.+++.|+|+.
T Consensus       151 ~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      151 RLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             cccccccCHHHHHHHHHHH
Confidence             699999999999999875


No 12 
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43  E-value=1.5e-13  Score=150.34  Aligned_cols=88  Identities=26%  Similarity=0.379  Sum_probs=79.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +||||+. .+++..+||||+||++|.||+|+|||... ...+++.+|....+.  +|..++.++++||.++|. +|++||
T Consensus       185 IAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-~vkety~~Ik~~~Y~--~P~~ls~~A~dLI~~lL~~~P~~Rp  261 (592)
T KOG0575|consen  185 IAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-TVKETYNKIKLNEYS--MPSHLSAEAKDLIRKLLRPNPSERP  261 (592)
T ss_pred             cChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-hHHHHHHHHHhcCcc--cccccCHHHHHHHHHHhcCCcccCC
Confidence            5999998 78999999999999999999999999974 478999999887763  345789999999999999 599999


Q ss_pred             CHHHHhcCCcccc
Q 008997           79 SARELLTDPFLQI   91 (547)
Q Consensus        79 Sa~ELLkHPff~~   91 (547)
                      |+.++|.|+||..
T Consensus       262 sl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  262 SLDEVLDHPFFKS  274 (592)
T ss_pred             CHHHHhcCHhhhC
Confidence            9999999999954


No 13 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.42  E-value=2.3e-13  Score=147.40  Aligned_cols=93  Identities=19%  Similarity=0.383  Sum_probs=83.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ++||+|. +..+..+|||+||||+|.|+.|.+||.+ .+...++++|+...+.  +++.+++.+++||+++|. +|++|+
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra-~NeyliFqkI~~l~y~--fp~~fp~~a~dLv~KLLv~dp~~Rl  330 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA-ANEYLIFQKIQALDYE--FPEGFPEDARDLIKKLLVRDPSDRL  330 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc-ccHHHHHHHHHHhccc--CCCCCCHHHHHHHHHHHccCccccc
Confidence            5899998 6778899999999999999999999998 4588999999987763  566788999999999999 699999


Q ss_pred             CHHHHhcCCccccCCCCc
Q 008997           79 SARELLTDPFLQIDDYDS   96 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~~   96 (547)
                      ++.+|..||||...+|..
T Consensus       331 t~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  331 TSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             cHHHHhhCcccccCChhh
Confidence            999999999999998875


No 14 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.42  E-value=1.7e-13  Score=139.74  Aligned_cols=95  Identities=26%  Similarity=0.542  Sum_probs=84.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ++|+.++|+|+|||++|||+.|.+||... ++.++|.+|+.++..  +|+.+++.+++||+++|+ |-++|.
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~-~~~~iY~KI~~~~v~--fP~~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD-NPIQIYEKILEGKVK--FPSYFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC-ChHHHHHHHHhCccc--CCcccCHHHHHHHHHHHhhhhHhhh
Confidence            6999998 89999999999999999999999999984 579999999999873  456789999999999999 688884


Q ss_pred             -----CHHHHhcCCccccCCCCchh
Q 008997           79 -----SARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~~~l   98 (547)
                           ...++..||||+..+|...+
T Consensus       285 gnlknG~~dIk~H~wF~~v~W~~i~  309 (355)
T KOG0616|consen  285 GNLKNGVEDIKNHPWFKGVDWEAIL  309 (355)
T ss_pred             cCcCCCccccccCcccccccHHHHh
Confidence                 57899999999998886544


No 15 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.40  E-value=7.2e-13  Score=141.32  Aligned_cols=91  Identities=24%  Similarity=0.411  Sum_probs=82.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++. ..|+..+|+||+|+++|.|++|.+||++.+ ...++..|..+.+  +...|..++..+++||+++|. +|.+
T Consensus       205 ~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~-~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~  283 (382)
T KOG0032|consen  205 VAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET-EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRK  283 (382)
T ss_pred             cCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC-hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCccc
Confidence            6999999 899999999999999999999999999865 5667778888865  556788899999999999999 6999


Q ss_pred             CCCHHHHhcCCccccC
Q 008997           77 RLSARELLTDPFLQID   92 (547)
Q Consensus        77 RpSa~ELLkHPff~~~   92 (547)
                      |+++.++|+|||++..
T Consensus       284 R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  284 RLTAAQALQHPWIKSI  299 (382)
T ss_pred             CCCHHHHhcCccccCC
Confidence            9999999999999975


No 16 
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.39  E-value=4.2e-13  Score=135.84  Aligned_cols=94  Identities=28%  Similarity=0.571  Sum_probs=82.6

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccC-CCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKV-EDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~-~S~elkdLI~kCL~-dP   74 (547)
                      ||||.+.    ..|+..+|||||||+++||+||++||.++....+++.+|+...+|...+.. +++.+++|+..||+ ++
T Consensus       258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~  337 (391)
T KOG0983|consen  258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDH  337 (391)
T ss_pred             cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCc
Confidence            8999987    479999999999999999999999999998888999999886555433333 79999999999999 59


Q ss_pred             CCCCCHHHHhcCCccccCCC
Q 008997           75 SSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~~~   94 (547)
                      .+||...+||+|||+...+.
T Consensus       338 r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  338 RKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             ccCcchHHHhcCcceeecch
Confidence            99999999999999987643


No 17 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.37  E-value=1.1e-12  Score=130.14  Aligned_cols=88  Identities=17%  Similarity=0.307  Sum_probs=66.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCCC-------------------C-----
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKKP-------------------E-----   53 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~P-------------------~-----   53 (547)
                      ||||++. ..|+.++||||+||++|+|++|++||.+......... +..  +..+                   .     
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07848         168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT-IQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ  246 (287)
T ss_pred             CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHhhCCCCHHHHHhhhccchhcccccCcccCcc
Confidence            6899987 6799999999999999999999999987543332221 111  1100                   0     


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                          .....++..+++||.+||. +|.+||+++++|+||||
T Consensus       247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                0112367889999999999 69999999999999998


No 18 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37  E-value=9.6e-13  Score=145.20  Aligned_cols=91  Identities=23%  Similarity=0.404  Sum_probs=81.4

Q ss_pred             Cccccc-ccCC-cccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            2 APEVYE-EEYN-ELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         2 APEVL~-~~Y~-~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||++. ..|+ .++||||+|||+|.||+|..||.. .|...++.+|..|.+  ..+..+++++++||.+||. ||++|+
T Consensus       179 ~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-dNir~LLlKV~~G~f--~MPs~Is~eaQdLLr~ml~VDp~~Ri  255 (786)
T KOG0588|consen  179 APEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-DNIRVLLLKVQRGVF--EMPSNISSEAQDLLRRMLDVDPSTRI  255 (786)
T ss_pred             CchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCcc--cCCCcCCHHHHHHHHHHhccCccccc
Confidence            899998 5675 599999999999999999999996 678999999999987  3457789999999999999 899999


Q ss_pred             CHHHHhcCCccccCCCC
Q 008997           79 SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~   95 (547)
                      |.+++++|||+......
T Consensus       256 T~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  256 TTEEILKHPFLSGYTSL  272 (786)
T ss_pred             cHHHHhhCchhhcCCCC
Confidence            99999999999876543


No 19 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.37  E-value=9.4e-13  Score=132.32  Aligned_cols=92  Identities=29%  Similarity=0.481  Sum_probs=78.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++|||||||++|+|++|..||.+.. ...++..+..+...  ++..+++.+++||++||. +|.+|+
T Consensus       165 ~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~  241 (291)
T cd05612         165 LAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN-PFGIYEKILAGKLE--FPRHLDLYAKDLIKKLLVVDRTRRL  241 (291)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCcC--CCccCCHHHHHHHHHHcCCCHHHcc
Confidence            6899988 678999999999999999999999998744 67777878776542  345568999999999999 699999


Q ss_pred             C-----HHHHhcCCccccCCCC
Q 008997           79 S-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~   95 (547)
                      +     +.+++.||||....+.
T Consensus       242 ~~~~~~~~~~l~h~~~~~~~~~  263 (291)
T cd05612         242 GNMKNGADDVKNHRWFKSVDWD  263 (291)
T ss_pred             CCccCCHHHHhcCccccCCCHH
Confidence            5     9999999999876543


No 20 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.37  E-value=2.4e-13  Score=141.32  Aligned_cols=92  Identities=30%  Similarity=0.463  Sum_probs=72.8

Q ss_pred             CCcccccccCC--cccchHhHHHHHHHHHhCCCCCCCC-CchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYEEEYN--ELVDIYSFGMCILEMVTFDYPYSEC-THPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~~~Y~--~kvDIWSlGVILyELLtG~~PF~g~-s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++...+.  .++||||+||++.||+||.+||... .....++........| .++..+++++++||.+|+. +|.+
T Consensus       188 maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~~Fl~~C~~~~p~~  266 (313)
T KOG0198|consen  188 MAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAKDFLRKCFKRDPEK  266 (313)
T ss_pred             cCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHHHHHHHHhhcCccc
Confidence            89999984433  3999999999999999999999873 3223333333333334 5667789999999999999 6999


Q ss_pred             CCCHHHHhcCCccccCC
Q 008997           77 RLSARELLTDPFLQIDD   93 (547)
Q Consensus        77 RpSa~ELLkHPff~~~~   93 (547)
                      ||||.+||.|||++...
T Consensus       267 Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  267 RPTAEELLEHPFLKQNS  283 (313)
T ss_pred             CcCHHHHhhChhhhccc
Confidence            99999999999998643


No 21 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.36  E-value=9.9e-13  Score=135.03  Aligned_cols=92  Identities=24%  Similarity=0.477  Sum_probs=78.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++|||||||++|+|++|..||.+.. ...++..+..+..+  ++..++..+++||.+||. +|.+|+
T Consensus       182 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~  258 (329)
T PTZ00263        182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-PFRIYEKILAGRLK--FPNWFDGRARDLVKGLLQTDHTKRL  258 (329)
T ss_pred             cCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-HHHHHHHHhcCCcC--CCCCCCHHHHHHHHHHhhcCHHHcC
Confidence            6999988 678999999999999999999999998743 67778888777543  344578999999999999 699999


Q ss_pred             C-----HHHHhcCCccccCCCC
Q 008997           79 S-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~   95 (547)
                      +     +.+++.||||....+.
T Consensus       259 ~~~~~~~~~ll~hp~f~~~~~~  280 (329)
T PTZ00263        259 GTLKGGVADVKNHPYFHGANWD  280 (329)
T ss_pred             CCCCCCHHHHhcCCccCCCCHH
Confidence            6     7999999999976554


No 22 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36  E-value=8.5e-13  Score=146.08  Aligned_cols=94  Identities=21%  Similarity=0.433  Sum_probs=82.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskRp   78 (547)
                      ||||++. ..|+..+|+|+|||++|||+.|++||.|. +.++++..|+......  |..++.++.++++++|++ |.+|+
T Consensus       535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd-dEee~FdsI~~d~~~y--P~~ls~ea~~il~~ll~k~p~kRL  611 (694)
T KOG0694|consen  535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD-DEEEVFDSIVNDEVRY--PRFLSKEAIAIMRRLLRKNPEKRL  611 (694)
T ss_pred             cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHhcCCCCC--CCcccHHHHHHHHHHhccCccccc
Confidence            7999999 78999999999999999999999999985 4789999998876543  445799999999999995 99998


Q ss_pred             C-----HHHHhcCCccccCCCCch
Q 008997           79 S-----ARELLTDPFLQIDDYDSD   97 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~~~   97 (547)
                      .     +.+|.+||||+..+|...
T Consensus       612 G~~e~d~~~i~~hpFFr~i~w~~L  635 (694)
T KOG0694|consen  612 GSGERDAEDIKKHPFFRSIDWDDL  635 (694)
T ss_pred             CCCCCCchhhhhCCccccCCHHHH
Confidence            5     688999999999988643


No 23 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.36  E-value=1.4e-12  Score=129.58  Aligned_cols=88  Identities=26%  Similarity=0.402  Sum_probs=68.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-C--C----------------------c
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-P--E----------------------A   54 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P--~----------------------~   54 (547)
                      ||||++. ..|+.++|||||||++|+|++|.+||.+.. ....+..+..... +  .                      .
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (290)
T cd07862         176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK  254 (290)
T ss_pred             cChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC-HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHH
Confidence            6899987 679999999999999999999999998754 3344444432110 0  0                      0


Q ss_pred             cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           55 LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        55 l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      ..+.+++.+++|+.+||+ +|.+||++.++|+||||
T Consensus       255 ~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         255 FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            113467889999999999 69999999999999998


No 24 
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.35  E-value=9.2e-13  Score=144.86  Aligned_cols=85  Identities=26%  Similarity=0.416  Sum_probs=74.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      .||||+. ..|++.|||||||+++|+||+|+.||....+..+++.++..+...    ..+|.++++||.+||+ +|.+|+
T Consensus       480 ~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~Rl  555 (612)
T KOG0603|consen  480 VAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPALRL  555 (612)
T ss_pred             cChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc----cccCHHHHHHHHHhccCChhhCc
Confidence            4899999 789999999999999999999999998755445677777655443    5689999999999999 799999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       556 ~~~~i~~h~w~  566 (612)
T KOG0603|consen  556 GADEIGAHPWF  566 (612)
T ss_pred             ChhhhccCcch
Confidence            99999999999


No 25 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.34  E-value=1.1e-12  Score=134.19  Aligned_cols=92  Identities=22%  Similarity=0.474  Sum_probs=77.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|||++|..||.... ...++..+..+..  .++..+++++++||.+||. +|.+||
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05571         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             cChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC-HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            6999988 679999999999999999999999998743 5566666665543  2345679999999999999 699999


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           ++.++++||||....+.
T Consensus       239 ~~~~~~~~~ll~h~~f~~~~~~  260 (323)
T cd05571         239 GGGPEDAKEIMEHRFFASINWQ  260 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCCCHH
Confidence                 89999999999887654


No 26 
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.34  E-value=7.7e-13  Score=135.30  Aligned_cols=94  Identities=21%  Similarity=0.437  Sum_probs=82.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~-d   73 (547)
                      .||||+. +.|+..+|+||+||++|.|++|.+||.....   ...+..+|..|.+  |.+.|..+|+.++++|+++|. +
T Consensus       230 vaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~  309 (400)
T KOG0604|consen  230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTE  309 (400)
T ss_pred             cCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCC
Confidence            4899998 7899999999999999999999999975332   3456778888876  777788899999999999999 6


Q ss_pred             cCCCCCHHHHhcCCccccCCC
Q 008997           74 VSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        74 PskRpSa~ELLkHPff~~~~~   94 (547)
                      |++|+++.+++.|||+.....
T Consensus       310 PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  310 PTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             chhheeHHHhhcCchhccccc
Confidence            999999999999999987543


No 27 
>PTZ00284 protein kinase; Provisional
Probab=99.34  E-value=1.2e-12  Score=141.31  Aligned_cols=91  Identities=23%  Similarity=0.293  Sum_probs=67.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCCCCcc----------------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKKPEAL----------------------   55 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~P~~l----------------------   55 (547)
                      ||||++. ..|+.++|||||||++|||++|++||.+...... +..+..  +..|..+                      
T Consensus       312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  390 (467)
T PTZ00284        312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH-LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPC  390 (467)
T ss_pred             cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHcCCCCHHHHhhccchhHHHHhhhccccccc
Confidence            7999988 6799999999999999999999999987553322 221111  1111000                      


Q ss_pred             ----------------ccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           56 ----------------FKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        56 ----------------~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                                      ....++.+.+||.+||. +|.+||++.|+|+||||...
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        391 TDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             CCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence                            00124567899999999 79999999999999999864


No 28 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.34  E-value=1.3e-12  Score=140.69  Aligned_cols=92  Identities=27%  Similarity=0.376  Sum_probs=70.4

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCC-----------------CC-------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKK-----------------PE-------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~-----------------P~-------   53 (547)
                      ||||++.  ..|+.++|||||||++|||++|.+||.+......+...+.. +..                 |.       
T Consensus       237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~  316 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLK  316 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHH
Confidence            6999986  46999999999999999999999999986544443332211 100                 00       


Q ss_pred             -ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 -ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 -~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                       .++...++++++||.+||. +|.+||++.++|+||||...
T Consensus       317 ~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence             0122357899999999999 69999999999999999764


No 29 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.33  E-value=2e-12  Score=132.26  Aligned_cols=92  Identities=17%  Similarity=0.399  Sum_probs=78.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...++..+..+...  .+..+++++++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~  239 (320)
T cd05590         163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-EDDLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRL  239 (320)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-HHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCC
Confidence            6999988 678999999999999999999999998744 66777777766542  334578999999999999 699999


Q ss_pred             CH------HHHhcCCccccCCCC
Q 008997           79 SA------RELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa------~ELLkHPff~~~~~~   95 (547)
                      ++      .++++||||....+.
T Consensus       240 ~~~~~~~~~~~~~h~~f~~~~~~  262 (320)
T cd05590         240 GSLTLGGEEAILRHPFFKELDWE  262 (320)
T ss_pred             CCCCCCCHHHHHcCCCcCCCCHH
Confidence            98      899999999876553


No 30 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.33  E-value=1e-12  Score=133.00  Aligned_cols=90  Identities=21%  Similarity=0.392  Sum_probs=78.3

Q ss_pred             CCccccc-------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL   71 (547)
                      +|||.+.       .+|+..+|+|++|||||.|+.|.+||+... ..-+++.|+.|++  ..+.|..++..+++||.+||
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-QmlMLR~ImeGkyqF~speWadis~~~KdLIsrlL  267 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-QMLMLRMIMEGKYQFRSPEWADISATVKDLISRLL  267 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-HHHHHHHHHhcccccCCcchhhccccHHHHHHHHH
Confidence            5899886       479999999999999999999999999743 4456778899987  34567889999999999999


Q ss_pred             c-ccCCCCCHHHHhcCCcccc
Q 008997           72 A-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        72 ~-dPskRpSa~ELLkHPff~~   91 (547)
                      + +|++|.|++|+|.||||..
T Consensus       268 qVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  268 QVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             eeCchhcccHHHHhcChHHHH
Confidence            9 7999999999999999953


No 31 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.33  E-value=2.5e-12  Score=132.02  Aligned_cols=92  Identities=23%  Similarity=0.487  Sum_probs=69.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHH----------------------------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKK----------------------------------   45 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~k----------------------------------   45 (547)
                      ||||++. ..|+.++|||||||++|+|++|+.||.... ...+...                                  
T Consensus       169 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (331)
T cd06649         169 MSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD-AKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDS  247 (331)
T ss_pred             CCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHhcccccccccCCccccCccccccccccccccccc
Confidence            6899988 679999999999999999999999997532 2222111                                  


Q ss_pred             ------------HHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           46 ------------VISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        46 ------------Ilsg~~P~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                                  +.....+......+++++++||.+||. +|.+||++.++++||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         248 RPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             ccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                        111111211122467899999999999 699999999999999998643


No 32 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.32  E-value=2.6e-12  Score=129.43  Aligned_cols=93  Identities=20%  Similarity=0.313  Sum_probs=68.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCC---------------CC--------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKK---------------PE--------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~---------------P~--------   53 (547)
                      ||||++.  ..|+.++||||+||++|+|++|..||.+..+....+..+..  +..               +.        
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (303)
T cd07869         170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPK  249 (303)
T ss_pred             CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCc
Confidence            6999986  46889999999999999999999999876544333332211  100               00        


Q ss_pred             cc---c--cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 AL---F--KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 ~l---~--~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                      ..   +  ...++.+++|+.+||+ +|.+|||+.+++.||||+...
T Consensus       250 ~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         250 NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence            00   0  0134678999999999 699999999999999998653


No 33 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.32  E-value=1.5e-12  Score=133.34  Aligned_cols=94  Identities=27%  Similarity=0.348  Sum_probs=76.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--CCCCccccCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--KKPEALFKVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~~P~~l~~~~S~elkdLI~kCL~dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ....+.++...  .........+++++++||.+||.+|.+|
T Consensus       197 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~dp~~R  275 (350)
T cd05573         197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT-LQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCDPEDR  275 (350)
T ss_pred             cCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-HHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHccChhhc
Confidence            6899988 679999999999999999999999998754 55666666652  2221222336999999999999999999


Q ss_pred             CC-HHHHhcCCccccCCCC
Q 008997           78 LS-ARELLTDPFLQIDDYD   95 (547)
Q Consensus        78 pS-a~ELLkHPff~~~~~~   95 (547)
                      ++ +.++++||||....+.
T Consensus       276 ~~s~~~ll~hp~~~~~~~~  294 (350)
T cd05573         276 LGSFEEIKSHPFFKGIDWE  294 (350)
T ss_pred             CCCHHHHhcCCCcCCCCHH
Confidence            99 9999999999976554


No 34 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.32  E-value=2.1e-12  Score=129.29  Aligned_cols=93  Identities=22%  Similarity=0.350  Sum_probs=73.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch---HHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP---AQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~---~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++. ..|+.++|||||||++|+|++|+.||.+....   ..+...+....  ...+..+++.+.+|+.+||. +|.
T Consensus       168 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~li~~~l~~~P~  245 (285)
T cd05631         168 MAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ--EEYSEKFSEDAKSICRMLLTKNPK  245 (285)
T ss_pred             cCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc--ccCCccCCHHHHHHHHHHhhcCHH
Confidence            6999998 78999999999999999999999999874321   22233332222  22345678999999999999 699


Q ss_pred             CCCC-----HHHHhcCCccccCCCC
Q 008997           76 SRLS-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        76 kRpS-----a~ELLkHPff~~~~~~   95 (547)
                      +||+     ++++++||||...++.
T Consensus       246 ~R~~~~~~~~~~~~~h~~~~~~~~~  270 (285)
T cd05631         246 ERLGCRGNGAAGVKQHPIFKNINFK  270 (285)
T ss_pred             HhcCCCCCCHHHHhcCHhhcCCCHH
Confidence            9997     8999999999987654


No 35 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.32  E-value=2e-12  Score=131.36  Aligned_cols=91  Identities=23%  Similarity=0.422  Sum_probs=76.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|+|++|..||.+.. ..+++..+..+..  .++..+++++++||.+||. +|.+|+
T Consensus       160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R~  236 (312)
T cd05585         160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-VNEMYRKILQEPL--RFPDGFDRDAKDLLIGLLSRDPTRRL  236 (312)
T ss_pred             CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-HHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcCCCHHHcC
Confidence            6999988 679999999999999999999999998744 5667777766543  3445679999999999999 699997


Q ss_pred             ---CHHHHhcCCccccCCC
Q 008997           79 ---SARELLTDPFLQIDDY   94 (547)
Q Consensus        79 ---Sa~ELLkHPff~~~~~   94 (547)
                         ++.+++.||||....+
T Consensus       237 ~~~~~~e~l~hp~~~~~~~  255 (312)
T cd05585         237 GYNGAQEIKNHPFFSQLSW  255 (312)
T ss_pred             CCCCHHHHHcCCCcCCCCH
Confidence               5899999999987643


No 36 
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.32  E-value=4.1e-12  Score=125.29  Aligned_cols=94  Identities=28%  Similarity=0.450  Sum_probs=75.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... +......+..+..+......+++.+.+++.+||. +|.+||
T Consensus       165 ~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rp  243 (274)
T cd06609         165 MAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH-PMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERP  243 (274)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc-hHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCc
Confidence            5899887 568999999999999999999999998644 4555555555544332222278899999999998 699999


Q ss_pred             CHHHHhcCCccccCCCC
Q 008997           79 SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~   95 (547)
                      +++++++||||+.....
T Consensus       244 t~~~il~~~~~~~~~~~  260 (274)
T cd06609         244 SAKELLKHKFIKKAKKT  260 (274)
T ss_pred             CHHHHhhChhhcCCCcc
Confidence            99999999999876544


No 37 
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.32  E-value=2.5e-12  Score=140.99  Aligned_cols=97  Identities=29%  Similarity=0.510  Sum_probs=81.8

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc-ccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL-FKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l-~~~~S~elkdLI~kCL~-   72 (547)
                      |||||+.      .+|+.++|||||||++.||+-+.+|-...+ +..++-+|....+|..+ +..++..+++|+.+||. 
T Consensus       197 MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-pMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~K  275 (1187)
T KOG0579|consen  197 MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVK  275 (1187)
T ss_pred             ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc-hHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhc
Confidence            8999976      589999999999999999999999998854 77777677666555443 55679999999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccCCCCchh
Q 008997           73 TVSSRLSARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~~~~~~l   98 (547)
                      +|..||++++||+||||+.......+
T Consensus       276 np~~Rp~aaqll~Hpfv~~~~SnK~i  301 (1187)
T KOG0579|consen  276 NPRNRPPAAQLLKHPFVQNAPSNKMI  301 (1187)
T ss_pred             CCccCCCHHHHhhCcccccCCcchHH
Confidence            59999999999999999977655444


No 38 
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.32  E-value=3.2e-12  Score=124.76  Aligned_cols=92  Identities=27%  Similarity=0.513  Sum_probs=73.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC----chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT----HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s----~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||....    ........+.....+......+++++++||.+||. +|
T Consensus       166 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  245 (265)
T cd06605         166 MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDP  245 (265)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCc
Confidence            5899887 678999999999999999999999997642    23344455555544433333378999999999999 69


Q ss_pred             CCCCCHHHHhcCCccccC
Q 008997           75 SSRLSARELLTDPFLQID   92 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~   92 (547)
                      .+||++.+++.||||+..
T Consensus       246 ~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         246 RERPSYKELLEHPFIKKY  263 (265)
T ss_pred             hhCcCHHHHhhCchhhcc
Confidence            999999999999999753


No 39 
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.32  E-value=4.7e-12  Score=123.42  Aligned_cols=88  Identities=30%  Similarity=0.471  Sum_probs=71.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++||||+|+++|+|++|+.||..... ......+.........+..++..+.+||.+||. +|.+||
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (263)
T cd06625         174 MSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-MAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRP  252 (263)
T ss_pred             cCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-HHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCC
Confidence            5899987 5688999999999999999999999986543 333334444433334556689999999999999 599999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++|+||
T Consensus       253 t~~~ll~~~~~  263 (263)
T cd06625         253 SAEELLRHFFV  263 (263)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997


No 40 
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.32  E-value=3.7e-12  Score=126.31  Aligned_cols=88  Identities=25%  Similarity=0.332  Sum_probs=67.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--CC-----C------------------Cc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--KK-----P------------------EA   54 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~~-----P------------------~~   54 (547)
                      ||||++. ..|+.++||||+||++|+|++|.+||.+... ...+.++...  ..     +                  ..
T Consensus       174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (288)
T cd07863         174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQS  252 (288)
T ss_pred             cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHH
Confidence            6899987 6799999999999999999999999987543 3333333221  00     0                  00


Q ss_pred             cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           55 LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        55 l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      ..+.++..+++||.+||. +|.+||++.+++.||||
T Consensus       253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         253 VVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             hCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            113457789999999999 69999999999999998


No 41 
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.31  E-value=2.5e-12  Score=127.78  Aligned_cols=93  Identities=29%  Similarity=0.501  Sum_probs=71.6

Q ss_pred             CCccccc-c---cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc---cccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE-E---EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA---LFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~-~---~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~---l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++. .   .|+.++||||+|+++|+|++|+.||.......+....+..+..+..   .+..++.++.+||.+||. 
T Consensus       174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  253 (288)
T cd06616         174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIK  253 (288)
T ss_pred             cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccC
Confidence            5899987 3   5889999999999999999999999865433333333333333221   123478899999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccCC
Q 008997           73 TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~~   93 (547)
                      +|.+||++.+++.||||+...
T Consensus       254 ~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         254 DESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             ChhhCcCHHHHhcChhhhchh
Confidence            599999999999999998643


No 42 
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.31  E-value=3.8e-12  Score=124.90  Aligned_cols=88  Identities=28%  Similarity=0.474  Sum_probs=68.3

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++.      ..|+.++|+||+||++|+|++|..||.... .......+.....+......++..+++|+.+||. +
T Consensus       178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  256 (272)
T cd06637         178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKN  256 (272)
T ss_pred             cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC-HHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCC
Confidence            5899875      358889999999999999999999997644 3333333333332223334568899999999999 6


Q ss_pred             cCCCCCHHHHhcCCcc
Q 008997           74 VSSRLSARELLTDPFL   89 (547)
Q Consensus        74 PskRpSa~ELLkHPff   89 (547)
                      |.+||++.+++.||||
T Consensus       257 p~~Rpt~~~il~~~~~  272 (272)
T cd06637         257 HSQRPTTEQLMKHPFI  272 (272)
T ss_pred             hhhCCCHHHHhhCCCC
Confidence            9999999999999997


No 43 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.31  E-value=2.3e-12  Score=133.72  Aligned_cols=92  Identities=23%  Similarity=0.405  Sum_probs=78.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|.+||.+.. ...+++.+..+...  ++..+++.+++||++||. +|.+|+
T Consensus       195 ~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~dp~~R~  271 (340)
T PTZ00426        195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-PLLIYQKILEGIIY--FPKFLDNNCKHLMKKLLSHDLTKRY  271 (340)
T ss_pred             cCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-HHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHcC
Confidence            7999988 668999999999999999999999998743 56677777776542  345578999999999999 599995


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           +++++++||||...+|.
T Consensus       272 ~~~~~~~~~~~~hp~f~~~~~~  293 (340)
T PTZ00426        272 GNLKKGAQNVKEHPWFGNIDWV  293 (340)
T ss_pred             CCCCCCHHHHHcCCCcCCCCHH
Confidence                 89999999999987654


No 44 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.31  E-value=3.4e-12  Score=127.87  Aligned_cols=88  Identities=22%  Similarity=0.311  Sum_probs=66.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCCCC-----------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKKPE-----------------------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~P~-----------------------   53 (547)
                      ||||++.  ..|+.++||||+||++|+|++|.+||.+.. ....+..+..  +..+.                       
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (288)
T cd07871         170 RPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST-VKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQ  248 (288)
T ss_pred             cChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCC
Confidence            6899986  468999999999999999999999998754 3333332221  11000                       


Q ss_pred             ---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 ---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                         .....+++++++||.+||. +|.+|||+.++++||||
T Consensus       249 ~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         249 PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence               0012357889999999999 69999999999999998


No 45 
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31  E-value=4.7e-13  Score=147.80  Aligned_cols=93  Identities=37%  Similarity=0.546  Sum_probs=79.9

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.   .+|+.++|||||||++.||+||++||.+...+...+.+|---+.-+..+..++.+++.||.+|+. +|.+
T Consensus       743 MAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~  822 (1226)
T KOG4279|consen  743 MAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCD  822 (1226)
T ss_pred             hChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCccc
Confidence            8999998   57999999999999999999999999988777665556644444445667789999999999999 5999


Q ss_pred             CCCHHHHhcCCccccCC
Q 008997           77 RLSARELLTDPFLQIDD   93 (547)
Q Consensus        77 RpSa~ELLkHPff~~~~   93 (547)
                      ||+|.+||.+||++...
T Consensus       823 R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  823 RPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             CccHHHhccCcccccCC
Confidence            99999999999998763


No 46 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.31  E-value=3.1e-12  Score=135.88  Aligned_cols=89  Identities=28%  Similarity=0.562  Sum_probs=77.8

Q ss_pred             CCccccc-cc-CC-cccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCC-CHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EE-YN-ELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVE-DPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~-Y~-~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~-S~elkdLI~kCL~-dPs   75 (547)
                      +|||++. .. |+ .++||||+||++|.|++|..||.. .+...++.+|..+.+.  ++..+ ++++++|+.+||. +|.
T Consensus       188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-~~~~~l~~ki~~~~~~--~p~~~~S~~~~~Li~~mL~~~P~  264 (370)
T KOG0583|consen  188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-SNVPNLYRKIRKGEFK--IPSYLLSPEARSLIEKMLVPDPS  264 (370)
T ss_pred             CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-ccHHHHHHHHhcCCcc--CCCCcCCHHHHHHHHHHcCCCcc
Confidence            6999998 45 76 699999999999999999999997 4577888888888764  33445 9999999999999 699


Q ss_pred             CCCCHHHHhcCCccccC
Q 008997           76 SRLSARELLTDPFLQID   92 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~   92 (547)
                      +|+++.+++.||||+..
T Consensus       265 ~R~t~~~i~~h~w~~~~  281 (370)
T KOG0583|consen  265 TRITLLEILEHPWFQKE  281 (370)
T ss_pred             cCCCHHHHhhChhhccC
Confidence            99999999999999974


No 47 
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.31  E-value=3.1e-12  Score=130.57  Aligned_cols=92  Identities=20%  Similarity=0.455  Sum_probs=77.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|+|||||++|+|++|..||.+.. ...++..+.....  ..+..+++.+++||.+||. +|.+||
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-EDELFQSILEDEV--RYPRWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHccCCHHHcC
Confidence            6899988 679999999999999999999999998744 5666666665543  2345678999999999999 699999


Q ss_pred             CH-----HHHhcCCccccCCCC
Q 008997           79 SA-----RELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa-----~ELLkHPff~~~~~~   95 (547)
                      ++     .+++.||||+...+.
T Consensus       240 s~~~~~~~~ll~~~~~~~~~~~  261 (318)
T cd05570         240 GCLPTGEQDIKGHPFFREIDWD  261 (318)
T ss_pred             CCCCCCHHHHhcCCCcCCCCHH
Confidence            99     999999999876553


No 48 
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.31  E-value=4.2e-12  Score=125.74  Aligned_cols=88  Identities=31%  Similarity=0.435  Sum_probs=68.6

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++.      ..|+.++|+||||+++|+|++|..||........+ ..+.....+......++..+.+||.+||. +
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  266 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-FLIPRNPPPKLKSKKWSKKFIDFIEGCLVKN  266 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-hhHhhCCCCCCcccccCHHHHHHHHHHhCCC
Confidence            5899875      35888999999999999999999999765432323 23333333333334578999999999999 6


Q ss_pred             cCCCCCHHHHhcCCcc
Q 008997           74 VSSRLSARELLTDPFL   89 (547)
Q Consensus        74 PskRpSa~ELLkHPff   89 (547)
                      |.+||++.+|++||||
T Consensus       267 p~~Rp~~~ell~~~~~  282 (282)
T cd06636         267 YLSRPSTEQLLKHPFI  282 (282)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997


No 49 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.30  E-value=2.9e-12  Score=132.57  Aligned_cols=94  Identities=28%  Similarity=0.500  Sum_probs=76.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc--cCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF--KVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~--~~~S~elkdLI~kCL~dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++|.+||.+.. ..+.+..+.........+  ..+++++++||.+||.+|.+|
T Consensus       206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~~p~~R  284 (364)
T cd05599         206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN-PQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCCEAERR  284 (364)
T ss_pred             cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC-HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHccCHhhc
Confidence            6999987 779999999999999999999999998754 566666676554322222  246899999999999888899


Q ss_pred             CC---HHHHhcCCccccCCCC
Q 008997           78 LS---ARELLTDPFLQIDDYD   95 (547)
Q Consensus        78 pS---a~ELLkHPff~~~~~~   95 (547)
                      ++   +.+++.||||+..++.
T Consensus       285 ~~~~~~~~ll~h~~~~~~~~~  305 (364)
T cd05599         285 LGNNGVNEIKSHPFFKGVDWE  305 (364)
T ss_pred             CCCCCHHHHhcCCCcCCCCHH
Confidence            87   9999999999987653


No 50 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.30  E-value=3.4e-12  Score=130.27  Aligned_cols=92  Identities=18%  Similarity=0.362  Sum_probs=78.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|+.||.+.. ...++..+..+...  ++..+++++++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-~~~~~~~i~~~~~~--~p~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN-EDDLFESILHDDVL--YPVWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhccCHHHcC
Confidence            6899988 679999999999999999999999998754 66777777766542  234578999999999999 699999


Q ss_pred             -------CHHHHhcCCccccCCCC
Q 008997           79 -------SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -------Sa~ELLkHPff~~~~~~   95 (547)
                             ++.+++.||||...++.
T Consensus       240 ~~~~~~~~~~~~~~hp~~~~~~~~  263 (321)
T cd05591         240 GCVASQGGEDAIKQHPFFKEIDWV  263 (321)
T ss_pred             CCCCCCCCHHHHhcCCccCCCCHH
Confidence                   89999999999876654


No 51 
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.30  E-value=6.4e-12  Score=122.07  Aligned_cols=87  Identities=28%  Similarity=0.582  Sum_probs=72.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++|+||+|+++|+|++|..||.+.. .......+..+..+. .+..+++.+.+|+.+||. +|.+||
T Consensus       169 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp  246 (257)
T cd08223         169 MSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-MNSLVYRIIEGKLPP-MPKDYSPELGELIATMLSKRPEKRP  246 (257)
T ss_pred             cChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHhcCCCC-CccccCHHHHHHHHHHhccCcccCC
Confidence            6899987 678899999999999999999999998744 445555566665533 345678999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++||||
T Consensus       247 ~~~~~l~~~~~  257 (257)
T cd08223         247 SVKSILRQPYI  257 (257)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997


No 52 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.30  E-value=5.4e-12  Score=128.97  Aligned_cols=91  Identities=21%  Similarity=0.432  Sum_probs=76.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...++..+..+...  .+..+++.+.+||.+||. +|.+||
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~-~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~  244 (324)
T cd05589         168 LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-EEEVFDSIVNDEVR--YPRFLSREAISIMRRLLRRNPERRL  244 (324)
T ss_pred             cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHhHcC
Confidence            6999988 678999999999999999999999998744 56666667665442  345678999999999999 699999


Q ss_pred             -----CHHHHhcCCccccCCC
Q 008997           79 -----SARELLTDPFLQIDDY   94 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~   94 (547)
                           ++.++++||||+...+
T Consensus       245 ~~~~~~~~~l~~~~~f~~~~~  265 (324)
T cd05589         245 GSGEKDAEDVKKQPFFRDINW  265 (324)
T ss_pred             CCCCCCHHHHhhCCCcCCCCH
Confidence                 6999999999987654


No 53 
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.30  E-value=6.3e-12  Score=123.13  Aligned_cols=89  Identities=29%  Similarity=0.376  Sum_probs=69.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||......................+..++.++++||++||. +|.+||
T Consensus       175 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  254 (265)
T cd06631         175 MAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERP  254 (265)
T ss_pred             cChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCC
Confidence            5799887 67889999999999999999999999875433333332222122223445678999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       255 ~~~~~l~~~~~  265 (265)
T cd06631         255 SALQLLRHDFL  265 (265)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997


No 54 
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.30  E-value=4.9e-12  Score=127.45  Aligned_cols=95  Identities=33%  Similarity=0.473  Sum_probs=73.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|||||||++|+|++|+.||.........+.....+..+...+..+++.+++|+.+||. +|..||
T Consensus       183 ~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  262 (296)
T cd06654         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRG  262 (296)
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCc
Confidence            5899887 56889999999999999999999999875432333333323322222345578899999999999 699999


Q ss_pred             CHHHHhcCCccccCCCC
Q 008997           79 SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~   95 (547)
                      ++.+++.||||......
T Consensus       263 t~~eil~~~~~~~~~~~  279 (296)
T cd06654         263 SAKELLQHQFLKIAKPL  279 (296)
T ss_pred             CHHHHhhChhhhccCCc
Confidence            99999999999876543


No 55 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.30  E-value=4.1e-12  Score=129.74  Aligned_cols=92  Identities=20%  Similarity=0.420  Sum_probs=78.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...++..+......  ++..+++++++|+.+||. +|.+|+
T Consensus       168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~-~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~l~~~p~~R~  244 (323)
T cd05616         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-EDELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRL  244 (323)
T ss_pred             cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC--CCCcCCHHHHHHHHHHcccCHHhcC
Confidence            6999988 779999999999999999999999998754 66777777766542  345679999999999999 699999


Q ss_pred             C-----HHHHhcCCccccCCCC
Q 008997           79 S-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~   95 (547)
                      +     ..+++.||||+..+|.
T Consensus       245 ~~~~~~~~~i~~h~~~~~~~~~  266 (323)
T cd05616         245 GCGPEGERDIKEHAFFRYIDWE  266 (323)
T ss_pred             CCCCCCHHHHhcCCCcCCCCHH
Confidence            7     4899999999987664


No 56 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.29  E-value=5e-12  Score=131.52  Aligned_cols=95  Identities=27%  Similarity=0.432  Sum_probs=75.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc--ccCCCHHHHHHHHHHhcc---c
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL--FKVEDPEVRQFIEKCLAT---V   74 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l--~~~~S~elkdLI~kCL~d---P   74 (547)
                      ||||++. ..|+.++|||||||++|||++|..||.+.. ...++.++........+  ...+++++++||.+++.+   +
T Consensus       203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r  281 (363)
T cd05628         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET-PQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHR  281 (363)
T ss_pred             cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhc
Confidence            6999987 679999999999999999999999998744 66777777764322112  223689999999997764   4


Q ss_pred             CCCCCHHHHhcCCccccCCCCc
Q 008997           75 SSRLSARELLTDPFLQIDDYDS   96 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~~~~~   96 (547)
                      ..||++.++++||||+..++..
T Consensus       282 ~~r~~~~ei~~hp~f~~~~~~~  303 (363)
T cd05628         282 IGAPGVEEIKTNPFFEGVDWEH  303 (363)
T ss_pred             CCCCCHHHHhCCCCCCCCCHHH
Confidence            4578999999999999876643


No 57 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.29  E-value=4.4e-12  Score=129.51  Aligned_cols=92  Identities=21%  Similarity=0.398  Sum_probs=75.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|+|++|..||.+.. ...++..+..+..  .++..++.++++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~  239 (316)
T cd05620         163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-EDELFESIRVDTP--HYPRWITKESKDILEKLFERDPTRRL  239 (316)
T ss_pred             cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            6899988 679999999999999999999999998754 5666666655432  2334578999999999999 699999


Q ss_pred             CH-HHHhcCCccccCCCC
Q 008997           79 SA-RELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa-~ELLkHPff~~~~~~   95 (547)
                      ++ .++++||||...++.
T Consensus       240 ~~~~~~~~h~~f~~~~~~  257 (316)
T cd05620         240 GVVGNIRGHPFFKTINWT  257 (316)
T ss_pred             CChHHHHcCCCcCCCCHH
Confidence            97 589999999876543


No 58 
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.29  E-value=5.9e-12  Score=123.17  Aligned_cols=94  Identities=23%  Similarity=0.444  Sum_probs=75.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC-chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT-HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s-~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||+|+++|+|++|..||.... +...++..+..+......+...++++++||.+||. +|.+|
T Consensus       159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  238 (262)
T cd05572         159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEER  238 (262)
T ss_pred             cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhC
Confidence            6899877 678899999999999999999999998643 24556666664433333444558999999999999 69999


Q ss_pred             CC-----HHHHhcCCccccCCC
Q 008997           78 LS-----ARELLTDPFLQIDDY   94 (547)
Q Consensus        78 pS-----a~ELLkHPff~~~~~   94 (547)
                      ++     ++++++||||....|
T Consensus       239 ~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         239 LGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             cCCcccCHHHHhcChhhhCCCC
Confidence            99     999999999987654


No 59 
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.29  E-value=4.2e-12  Score=129.71  Aligned_cols=91  Identities=27%  Similarity=0.523  Sum_probs=67.9

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC------------------------
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE------------------------   53 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~------------------------   53 (547)
                      ||||++.   ..|+.++|||||||++|+|++|..||..... .+.......+..+.                        
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T cd08227         175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPA-TQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSG  253 (327)
T ss_pred             cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcch-hHHHHHHhcCCccccccccchhhhhcccCCcccCCcCC
Confidence            6899986   3589999999999999999999999986442 22222222221110                        


Q ss_pred             --------------------ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 --------------------ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 --------------------~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                                          .....+++.+++||.+||. +|.+|||+.++++||||+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         254 LGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             CCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                                0112346789999999999 79999999999999999764


No 60 
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.29  E-value=5.2e-12  Score=123.13  Aligned_cols=88  Identities=27%  Similarity=0.468  Sum_probs=67.5

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc-cCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF-KVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~-~~~S~elkdLI~kCL~-   72 (547)
                      ||||++.      ..|+.++||||||+++|+|++|.+||.... .......+.....+.... ...+..+++||.+||. 
T Consensus       180 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  258 (275)
T cd06608         180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH-PMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIK  258 (275)
T ss_pred             cCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc-hHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhc
Confidence            6899875      247789999999999999999999998643 333334444443322221 2257899999999999 


Q ss_pred             ccCCCCCHHHHhcCCcc
Q 008997           73 TVSSRLSARELLTDPFL   89 (547)
Q Consensus        73 dPskRpSa~ELLkHPff   89 (547)
                      +|.+||++.++++|||+
T Consensus       259 dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         259 NYEQRPFMEELLEHPFI  275 (275)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            69999999999999996


No 61 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.29  E-value=4.1e-12  Score=130.08  Aligned_cols=93  Identities=26%  Similarity=0.338  Sum_probs=74.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC----CCc--cccCCCHHHHHHHHHHhcc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK----PEA--LFKVEDPEVRQFIEKCLAT   73 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~----P~~--l~~~~S~elkdLI~kCL~d   73 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...++..+.....    |..  ....+++++++||.+||.+
T Consensus       165 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~  243 (333)
T cd05600         165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST-PNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLIND  243 (333)
T ss_pred             cChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC-HHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhC
Confidence            6999988 679999999999999999999999998743 5666665554322    110  1124589999999999995


Q ss_pred             -cCCCCCHHHHhcCCccccCCC
Q 008997           74 -VSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        74 -PskRpSa~ELLkHPff~~~~~   94 (547)
                       |.+|+++.++++||||....+
T Consensus       244 ~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         244 PSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             hhhhcCCHHHHHhCcccCCCCH
Confidence             999999999999999997654


No 62 
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.29  E-value=5.5e-12  Score=127.31  Aligned_cols=93  Identities=33%  Similarity=0.510  Sum_probs=72.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-CCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-PEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+|||||++|+|++|..||.+......+ ..+..... +...+..+++.+++||.+||. +|.+|
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  260 (296)
T cd06655         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR  260 (296)
T ss_pred             cCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhC
Confidence            6899887 66889999999999999999999999875432332 23333222 222345578999999999999 69999


Q ss_pred             CCHHHHhcCCccccCCC
Q 008997           78 LSARELLTDPFLQIDDY   94 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~   94 (547)
                      |++.+++.||||+....
T Consensus       261 pt~~~il~~~~~~~~~~  277 (296)
T cd06655         261 GSAKELLQHPFLKLAKP  277 (296)
T ss_pred             CCHHHHhhChHhhhccc
Confidence            99999999999986543


No 63 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.29  E-value=5e-12  Score=129.30  Aligned_cols=92  Identities=22%  Similarity=0.443  Sum_probs=76.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|+|++|..||.+.. ..+++..+.....  .++..++.++++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-EEELFQSIRMDNP--CYPRWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCC--CCCccCCHHHHHHHHHHhccCHhhcC
Confidence            6999988 679999999999999999999999998754 5666666655433  2334578999999999999 699999


Q ss_pred             CHH-HHhcCCccccCCCC
Q 008997           79 SAR-ELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa~-ELLkHPff~~~~~~   95 (547)
                      ++. +++.||||+...+.
T Consensus       240 ~~~~~l~~h~~~~~~~~~  257 (316)
T cd05619         240 GVKGDIRQHPFFREIDWS  257 (316)
T ss_pred             CChHHHHcCcccCCCCHH
Confidence            996 89999999987653


No 64 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.29  E-value=5.1e-12  Score=128.40  Aligned_cols=93  Identities=28%  Similarity=0.400  Sum_probs=67.9

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHH--------------HHHHHh-----------CCCC
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQI--------------YKKVIS-----------GKKP   52 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI--------------~~kIls-----------g~~P   52 (547)
                      ||||++.   ..|+.++|||||||++|+|++|++||.+.....++              ...+..           ...+
T Consensus       173 ~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  252 (338)
T cd07859         173 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQP  252 (338)
T ss_pred             CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCC
Confidence            6899976   47899999999999999999999999864421111              011100           0011


Q ss_pred             C---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           53 E---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        53 ~---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                      .   ...+..++.+.+||.+||. +|.+||++.++++||||+...
T Consensus       253 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         253 VPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             CchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            1   1123467889999999999 699999999999999998643


No 65 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.29  E-value=6e-12  Score=128.61  Aligned_cols=92  Identities=21%  Similarity=0.421  Sum_probs=77.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|+|++|+.||.+.. ...++..+.....  .++..+++++++|+.+||. +|.+|+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~  244 (324)
T cd05587         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-EDELFQSIMEHNV--SYPKSLSKEAVSICKGLLTKHPAKRL  244 (324)
T ss_pred             cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHcC
Confidence            6899988 679999999999999999999999998744 5667777766543  2345679999999999999 699999


Q ss_pred             CH-----HHHhcCCccccCCCC
Q 008997           79 SA-----RELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa-----~ELLkHPff~~~~~~   95 (547)
                      ++     .+++.||||...++.
T Consensus       245 ~~~~~~~~~~~~hp~~~~~~~~  266 (324)
T cd05587         245 GCGPTGERDIREHAFFRRIDWE  266 (324)
T ss_pred             CCCCCCHHHHhcCCCcCCCCHH
Confidence            76     899999999987653


No 66 
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.29  E-value=4.4e-12  Score=122.89  Aligned_cols=88  Identities=34%  Similarity=0.514  Sum_probs=67.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC-CccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP-EALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P-~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++|..||..... ......+.....+ ...+..++..+.+||.+||. +|.+|
T Consensus       166 ~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  244 (256)
T cd06612         166 MAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP-MRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEER  244 (256)
T ss_pred             cCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcch-hhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhC
Confidence            5899887 6788999999999999999999999986442 2222222222111 11233467899999999999 69999


Q ss_pred             CCHHHHhcCCcc
Q 008997           78 LSARELLTDPFL   89 (547)
Q Consensus        78 pSa~ELLkHPff   89 (547)
                      |++.+++.||||
T Consensus       245 ps~~~il~~~~~  256 (256)
T cd06612         245 PSAIQLLQHPFI  256 (256)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999997


No 67 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.28  E-value=6.3e-12  Score=128.60  Aligned_cols=92  Identities=32%  Similarity=0.494  Sum_probs=77.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++||||||+++|||++|..||.+.. ....+..+..+..  .++..+++.+++||.+||. +|.+|+
T Consensus       167 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  243 (323)
T cd05584         167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-RKKTIDKILKGKL--NLPPYLTPEARDLLKKLLKRNPSSRL  243 (323)
T ss_pred             cChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHcccCHhHcC
Confidence            6999987 678899999999999999999999998754 5566666766654  2345678999999999999 699999


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           ++.+++.||||....+.
T Consensus       244 ~~~~~~~~~l~~h~~~~~~~~~  265 (323)
T cd05584         244 GAGPGDAAEVQSHPFFRHVNWD  265 (323)
T ss_pred             CCCCCCHHHHhcCCCcCCCCHH
Confidence                 89999999999876543


No 68 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.28  E-value=5.1e-12  Score=129.88  Aligned_cols=92  Identities=20%  Similarity=0.443  Sum_probs=76.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...+...+..+..  .++..+++++++||.+||. +|.+|+
T Consensus       162 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             cChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-HHHHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence            6999987 679999999999999999999999998744 5566666655443  2445679999999999999 699997


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           ++.++++||||....+.
T Consensus       239 ~~~~~~~~~il~h~~~~~~~~~  260 (328)
T cd05593         239 GGGPDDAKEIMRHSFFTGVNWQ  260 (328)
T ss_pred             CCCCCCHHHHhcCCCcCCCCHH
Confidence                 89999999999876553


No 69 
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.28  E-value=8.6e-12  Score=123.44  Aligned_cols=89  Identities=27%  Similarity=0.425  Sum_probs=66.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-------------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-------------------------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-------------------------   53 (547)
                      +|||++.  ..++.++||||||+++|+|++|..||.+......+.+.+.....+.                         
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T cd07860         167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDF  246 (284)
T ss_pred             cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCH
Confidence            5899876  3468899999999999999999999987554333333222111100                         


Q ss_pred             -ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 -ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 -~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                       ...+.+++++++||.+||. +|++||+++++++||||
T Consensus       247 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         247 SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence             0123467889999999999 69999999999999998


No 70 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.27  E-value=8.4e-12  Score=129.32  Aligned_cols=90  Identities=31%  Similarity=0.447  Sum_probs=66.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH----------------------hCC--CCC--
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI----------------------SGK--KPE--   53 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl----------------------sg~--~P~--   53 (547)
                      ||||++. ..|+.++||||+||++|+|++|..||.+....... ..+.                      ...  .+.  
T Consensus       189 ~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (359)
T cd07876         189 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQW-NKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGIS  267 (359)
T ss_pred             CCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcc
Confidence            6999988 67999999999999999999999999875432211 1111                      000  000  


Q ss_pred             --------------ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           54 --------------ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        54 --------------~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                                    ......++.+++||.+||. +|.+|||+.|+|.||||..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         268 FEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             hhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                          0011246789999999999 6999999999999999975


No 71 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.27  E-value=5.3e-12  Score=132.06  Aligned_cols=95  Identities=31%  Similarity=0.415  Sum_probs=75.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~dPskR   77 (547)
                      ||||++. ..|+.++||||+||++|||++|.+||.+.. +.....++.....  +.+....+++++++||.+++.+|.+|
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R  293 (382)
T cd05625         215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQT-PLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDR  293 (382)
T ss_pred             CCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCC-HHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHccCHhHc
Confidence            6999987 779999999999999999999999998754 4555555554332  22223457899999999987789999


Q ss_pred             CC---HHHHhcCCccccCCCCc
Q 008997           78 LS---ARELLTDPFLQIDDYDS   96 (547)
Q Consensus        78 pS---a~ELLkHPff~~~~~~~   96 (547)
                      ++   +.+++.||||+..++..
T Consensus       294 ~~~~~~~ei~~hp~f~~~~~~~  315 (382)
T cd05625         294 LGKNGADEIKAHPFFKTIDFSS  315 (382)
T ss_pred             CCCCCHHHHhcCCCcCCcChHH
Confidence            87   99999999998876543


No 72 
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.27  E-value=9.1e-12  Score=124.14  Aligned_cols=89  Identities=29%  Similarity=0.477  Sum_probs=68.0

Q ss_pred             CCccccc-c-----cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc-cccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE-E-----EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA-LFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~-~-----~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~-l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++. .     .++.++|||||||++|+|++|++||.... .......+.....+.. .+...+..+++||.+||. 
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  273 (291)
T cd06639         195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH-PVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIK  273 (291)
T ss_pred             cChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc-HHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhc
Confidence            5899875 1     36789999999999999999999998754 3333334443333211 123456789999999999 


Q ss_pred             ccCCCCCHHHHhcCCccc
Q 008997           73 TVSSRLSARELLTDPFLQ   90 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~   90 (547)
                      +|.+||++.+++.||||+
T Consensus       274 ~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         274 DFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ChhhCcCHHHHhcCcccC
Confidence            699999999999999995


No 73 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.27  E-value=7.3e-12  Score=125.02  Aligned_cols=93  Identities=25%  Similarity=0.443  Sum_probs=72.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch---HHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP---AQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~---~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++. ..|+.++|+||||+++|+|++|+.||......   ..+...+....  ...+..+++.+++|+.+||. +|.
T Consensus       164 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~  241 (280)
T cd05608         164 MAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS--VTYPDKFSPASKSFCEALLAKDPE  241 (280)
T ss_pred             cCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC--CCCcccCCHHHHHHHHHHhcCCHH
Confidence            6899988 77899999999999999999999999764321   22233333222  23345678999999999999 699


Q ss_pred             CCC-----CHHHHhcCCccccCCCC
Q 008997           76 SRL-----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        76 kRp-----Sa~ELLkHPff~~~~~~   95 (547)
                      +||     +++++++||||+...+.
T Consensus       242 ~R~~~~~~~~~~~l~h~~~~~~~~~  266 (280)
T cd05608         242 KRLGFRDGNCDGLRTHPLFRDLNWR  266 (280)
T ss_pred             HhcCCCCCCHHHHhcChhhhcCCHh
Confidence            999     78999999999876543


No 74 
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.27  E-value=1.1e-11  Score=120.00  Aligned_cols=87  Identities=28%  Similarity=0.534  Sum_probs=73.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ...+..++..+..+. ....++..+++++.+||. +|++||
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp  245 (256)
T cd08529         168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN-QGALILKIIRGVFPP-VSQMYSQQLAQLIDQCLTKDYRQRP  245 (256)
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCC-CccccCHHHHHHHHHHccCCcccCc
Confidence            5899887 678899999999999999999999998754 556666676665543 233578999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.|||+
T Consensus       246 ~~~~ll~~~~~  256 (256)
T cd08529         246 DTFQLLRNPSL  256 (256)
T ss_pred             CHHHHhhCCCC
Confidence            99999999996


No 75 
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.27  E-value=7.5e-12  Score=123.86  Aligned_cols=89  Identities=20%  Similarity=0.320  Sum_probs=65.1

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC-------------------CCC------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK-------------------KPE------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~-------------------~P~------   53 (547)
                      +|||++.  ..|+.++||||||+++|+|++|..||.........+..+....                   .+.      
T Consensus       166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
T cd07839         166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS  245 (284)
T ss_pred             cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcch
Confidence            5899886  3578999999999999999999888644333333333332110                   000      


Q ss_pred             --ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 --ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 --~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                        ...+.+++++++||.+||. +|.+|||+++++.||||
T Consensus       246 ~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             hhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence              0112467899999999999 69999999999999998


No 76 
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.27  E-value=8.5e-12  Score=123.18  Aligned_cols=93  Identities=31%  Similarity=0.585  Sum_probs=72.7

Q ss_pred             CCccccc-----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE-----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~-----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      +|||++.     ..|+.++|+||||+++|+|++|..||.......+.+..+..+..+......++.++++||.+||. +|
T Consensus       170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  249 (283)
T cd06617         170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNY  249 (283)
T ss_pred             cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCh
Confidence            5899875     35788999999999999999999999754333344444444443333334578999999999999 69


Q ss_pred             CCCCCHHHHhcCCccccCC
Q 008997           75 SSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~~   93 (547)
                      .+||++.+++.||||+...
T Consensus       250 ~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         250 KERPNYPELLQHPFFELHL  268 (283)
T ss_pred             hhCcCHHHHhcCchhhhcc
Confidence            9999999999999998754


No 77 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.27  E-value=7.4e-12  Score=128.24  Aligned_cols=92  Identities=22%  Similarity=0.466  Sum_probs=76.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.... ...++..+.....  .++..+++++++||.+||. +|.+|+
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05595         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HERLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             CCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHccCCHHHhC
Confidence            6999987 779999999999999999999999998744 4556666654443  2345679999999999999 699998


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           ++.++++|+||....+.
T Consensus       239 ~~~~~~~~~~l~h~~~~~~~~~  260 (323)
T cd05595         239 GGGPSDAKEVMEHRFFLSINWQ  260 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCCCHH
Confidence                 89999999999876554


No 78 
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.27  E-value=9.6e-12  Score=123.44  Aligned_cols=93  Identities=30%  Similarity=0.590  Sum_probs=72.4

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-   72 (547)
                      ||||++.      ..++.++|+|||||++|+|++|.+||.... .......+.....+. ..+..++.++++||.+||. 
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  248 (282)
T cd06643         170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEK  248 (282)
T ss_pred             cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-HHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccC
Confidence            6899874      357789999999999999999999998754 444444444433322 2234578899999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccCCC
Q 008997           73 TVSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~~~   94 (547)
                      +|.+||++.++++||||.....
T Consensus       249 ~p~~Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         249 NVDARWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             ChhhCcCHHHHhcCCCEeccCC
Confidence            6999999999999999987543


No 79 
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.26  E-value=9.4e-12  Score=122.97  Aligned_cols=89  Identities=28%  Similarity=0.384  Sum_probs=66.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC-C------------------C-------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK-K------------------P-------   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~-~------------------P-------   52 (547)
                      +|||++.  ..++.++||||||+++|+|++|.+||.+......+...+.... .                  +       
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
T cd07861         168 RAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSL  247 (285)
T ss_pred             cChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchh
Confidence            6899886  4578999999999999999999999987543333332211100 0                  0       


Q ss_pred             CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           53 EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        53 ~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      ......+++++++||.+||. +|.+||++.+++.||||
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         248 RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            01123468899999999999 69999999999999998


No 80 
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.26  E-value=9.7e-12  Score=121.50  Aligned_cols=93  Identities=25%  Similarity=0.465  Sum_probs=74.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      +|||++. ..++.++||||+|+++|+|++|..||.... ...++..+..+..  +......+++.+++||.+||. +|.+
T Consensus       160 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  238 (260)
T cd05611         160 LAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-PDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAK  238 (260)
T ss_pred             cChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHH
Confidence            5899887 558899999999999999999999998744 5666666655443  223334578999999999999 6999


Q ss_pred             CCC---HHHHhcCCccccCCC
Q 008997           77 RLS---ARELLTDPFLQIDDY   94 (547)
Q Consensus        77 RpS---a~ELLkHPff~~~~~   94 (547)
                      ||+   +.+++.||||+..+|
T Consensus       239 R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         239 RLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             ccCCCcHHHHHcChHhhcCCC
Confidence            995   579999999987654


No 81 
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.26  E-value=8.4e-12  Score=121.43  Aligned_cols=88  Identities=35%  Similarity=0.566  Sum_probs=69.5

Q ss_pred             CCccccc-c-cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc----cccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE-E-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA----LFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~-~-~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~----l~~~~S~elkdLI~kCL~-d   73 (547)
                      ||||++. . .++.++|+||||+++|+|++|+.||.... ....+..+.....+..    .+..+++.+++|+.+||. +
T Consensus       173 ~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  251 (267)
T cd06610         173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP-PMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKD  251 (267)
T ss_pred             cChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC-hhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCC
Confidence            5899887 3 68899999999999999999999998754 3444544444432211    123567899999999999 6


Q ss_pred             cCCCCCHHHHhcCCcc
Q 008997           74 VSSRLSARELLTDPFL   89 (547)
Q Consensus        74 PskRpSa~ELLkHPff   89 (547)
                      |.+||++.+++.||||
T Consensus       252 p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         252 PSKRPTAEELLKHKFF  267 (267)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999998


No 82 
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.26  E-value=1.4e-11  Score=123.15  Aligned_cols=95  Identities=29%  Similarity=0.473  Sum_probs=73.8

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++.      ..|+.++|+|||||++|+|++|.+||.... ....+.++.....+. ..+..++.++.+||.+||. 
T Consensus       177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  255 (292)
T cd06644         177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-PMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDK  255 (292)
T ss_pred             cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc-HHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcC
Confidence            5899874      347889999999999999999999998644 444444454443322 2234567899999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccCCCCc
Q 008997           73 TVSSRLSARELLTDPFLQIDDYDS   96 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~~~~~   96 (547)
                      +|.+||++.++++||||....+..
T Consensus       256 ~p~~Rp~~~~il~~~~~~~~~~~~  279 (292)
T cd06644         256 HPETRPSAAQLLEHPFVSSVTSNR  279 (292)
T ss_pred             CcccCcCHHHHhcCccccccccch
Confidence            699999999999999998766544


No 83 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.26  E-value=8.2e-12  Score=130.92  Aligned_cols=94  Identities=22%  Similarity=0.374  Sum_probs=75.7

Q ss_pred             CCccccc-----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc--cCCCHHHHHHHHHHhcc
Q 008997            1 MAPEVYE-----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF--KVEDPEVRQFIEKCLAT   73 (547)
Q Consensus         1 MAPEVL~-----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~--~~~S~elkdLI~kCL~d   73 (547)
                      ||||++.     ..|+.++|||||||++|||++|.+||.+.. ...++..+........++  ..++.++++||.+||.+
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  288 (370)
T cd05596         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTD  288 (370)
T ss_pred             ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-HHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccC
Confidence            6899986     248899999999999999999999998754 566777777654322222  34689999999999994


Q ss_pred             -cCC--CCCHHHHhcCCccccCCCC
Q 008997           74 -VSS--RLSARELLTDPFLQIDDYD   95 (547)
Q Consensus        74 -Psk--RpSa~ELLkHPff~~~~~~   95 (547)
                       |.+  |+++.++++||||+...+.
T Consensus       289 ~p~r~~R~s~~ell~h~~~~~~~~~  313 (370)
T cd05596         289 REVRLGRNGVDEIKSHPFFKNDQWT  313 (370)
T ss_pred             hhhccCCCCHHHHhcCcccCCCChh
Confidence             776  9999999999999986654


No 84 
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.26  E-value=9.2e-12  Score=122.51  Aligned_cols=88  Identities=34%  Similarity=0.534  Sum_probs=68.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||+||++|+|++|+.||........+... ........++..+++.+++|+ +||. +|.+||
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp  253 (266)
T cd06651         176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI-ATQPTNPQLPSHISEHARDFL-GCIFVEARHRP  253 (266)
T ss_pred             cCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH-hcCCCCCCCchhcCHHHHHHH-HHhcCChhhCc
Confidence            5899887 66889999999999999999999999875544444433 222222334456788999999 5666 799999


Q ss_pred             CHHHHhcCCccc
Q 008997           79 SARELLTDPFLQ   90 (547)
Q Consensus        79 Sa~ELLkHPff~   90 (547)
                      +++++++||||+
T Consensus       254 ~~~eil~hp~~~  265 (266)
T cd06651         254 SAEELLRHPFAQ  265 (266)
T ss_pred             CHHHHhcCcccc
Confidence            999999999996


No 85 
>PHA02988 hypothetical protein; Provisional
Probab=99.26  E-value=1e-11  Score=124.86  Aligned_cols=84  Identities=25%  Similarity=0.398  Sum_probs=69.7

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.   ..|+.++|||||||++|||++|..||.+.. ..+++..+..+......+...++.+++|+.+||. +|.+
T Consensus       187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~  265 (283)
T PHA02988        187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-TKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIK  265 (283)
T ss_pred             cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCccc
Confidence            6899986   479999999999999999999999998754 5677777765544333444678999999999999 6999


Q ss_pred             CCCHHHHhc
Q 008997           77 RLSARELLT   85 (547)
Q Consensus        77 RpSa~ELLk   85 (547)
                      ||++.+++.
T Consensus       266 Rps~~ell~  274 (283)
T PHA02988        266 RPNIKEILY  274 (283)
T ss_pred             CcCHHHHHH
Confidence            999999974


No 86 
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.26  E-value=9.7e-12  Score=122.26  Aligned_cols=89  Identities=37%  Similarity=0.525  Sum_probs=67.8

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      +|||++.   ..++.++|+||||+++|+|++|..||............+.........+..+++++++|+.+||. +|.+
T Consensus       176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  255 (268)
T cd06624         176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDK  255 (268)
T ss_pred             cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchh
Confidence            5899876   34889999999999999999999999864433222222211112223445678999999999999 5999


Q ss_pred             CCCHHHHhcCCcc
Q 008997           77 RLSARELLTDPFL   89 (547)
Q Consensus        77 RpSa~ELLkHPff   89 (547)
                      ||++.+++.||||
T Consensus       256 Rpt~~~ll~~~~~  268 (268)
T cd06624         256 RASAHDLLQDPFL  268 (268)
T ss_pred             CCCHHHHHhCCCC
Confidence            9999999999997


No 87 
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.26  E-value=1.1e-11  Score=122.64  Aligned_cols=93  Identities=28%  Similarity=0.523  Sum_probs=73.3

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++.      ..++.++|+||||+++|+|++|.+||.+.. .......+..+..+. ..+..++.++.+||.+||. 
T Consensus       170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  248 (280)
T cd06611         170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN-PMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVK  248 (280)
T ss_pred             cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC-HHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhcc
Confidence            5899874      346779999999999999999999998754 445555555554332 2234568899999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccCCC
Q 008997           73 TVSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~~~   94 (547)
                      +|.+||++.++++||||.....
T Consensus       249 ~p~~Rps~~~il~~~~~~~~~~  270 (280)
T cd06611         249 DPDDRPTAAELLKHPFVSDQSD  270 (280)
T ss_pred             ChhhCcCHHHHhcChhhcccch
Confidence            6999999999999999987543


No 88 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.26  E-value=3.7e-12  Score=132.20  Aligned_cols=95  Identities=26%  Similarity=0.464  Sum_probs=76.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc--cCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF--KVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~--~~~S~elkdLI~kCL~dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|||++|.+||.+.. +..++.++........++  ..+++++++||.+++.+|.+|
T Consensus       203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~p~~R  281 (360)
T cd05627         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET-PQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCTDSENR  281 (360)
T ss_pred             cCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC-HHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhccChhhc
Confidence            6999988 779999999999999999999999998744 666777776543211121  236899999999987788888


Q ss_pred             C---CHHHHhcCCccccCCCCc
Q 008997           78 L---SARELLTDPFLQIDDYDS   96 (547)
Q Consensus        78 p---Sa~ELLkHPff~~~~~~~   96 (547)
                      +   ++.+++.||||+..+|..
T Consensus       282 ~~~~~~~ei~~hp~f~~~~~~~  303 (360)
T cd05627         282 IGSNGVEEIKSHPFFEGVDWGH  303 (360)
T ss_pred             CCCCCHHHHhcCCCCCCCCHHH
Confidence            7   489999999999877653


No 89 
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.25  E-value=1.5e-11  Score=124.29  Aligned_cols=89  Identities=20%  Similarity=0.392  Sum_probs=62.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCch--------HHHHHHHHh--CCC-----------CC----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHP--------AQIYKKVIS--GKK-----------PE----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~--------~qI~~kIls--g~~-----------P~----   53 (547)
                      ||||++.  ..|+.++||||+||++|+|++|.+||.+....        ...+..+..  +..           +.    
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T cd07868         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTL  261 (317)
T ss_pred             cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhh
Confidence            6999987  45899999999999999999999999743210        011111111  000           00    


Q ss_pred             -------------------ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 -------------------ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 -------------------~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                                         ......+..+.+||.+||. +|.+|+|++|+|+||||
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         262 MKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                               0001135678999999999 79999999999999998


No 90 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.25  E-value=8e-12  Score=127.65  Aligned_cols=92  Identities=25%  Similarity=0.401  Sum_probs=77.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.... ..+++..+..+...  .++.+++.+.+||.+||. +|.+||
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~~p~~R~  239 (323)
T cd05575         163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-TAEMYDNILNKPLR--LKPNISVSARHLLEGLLQKDRTKRL  239 (323)
T ss_pred             cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-HHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhCC
Confidence            6899988 679999999999999999999999998743 66777777765432  344579999999999999 699999


Q ss_pred             CH----HHHhcCCccccCCCC
Q 008997           79 SA----RELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa----~ELLkHPff~~~~~~   95 (547)
                      ++    .+++.||||....+.
T Consensus       240 ~~~~~~~~il~~~~~~~~~~~  260 (323)
T cd05575         240 GAKDDFLEIKNHVFFSSINWD  260 (323)
T ss_pred             CCCCCHHHHHcCCCcCCCCHH
Confidence            86    699999999876553


No 91 
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.25  E-value=1.7e-11  Score=122.78  Aligned_cols=93  Identities=34%  Similarity=0.561  Sum_probs=74.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc-ccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL-FKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l-~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|+||||+++|+|++|..||.... +......+..+..+... ...++..+.+|+.+||. +|.+|
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  260 (285)
T cd06648         182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-PLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR  260 (285)
T ss_pred             cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-HHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhC
Confidence            5899887 578999999999999999999999998743 45555556555332211 22367899999999999 59999


Q ss_pred             CCHHHHhcCCccccCCC
Q 008997           78 LSARELLTDPFLQIDDY   94 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~   94 (547)
                      |++.+++.||||+....
T Consensus       261 pt~~~il~~~~~~~~~~  277 (285)
T cd06648         261 ATAAELLNHPFLAKAGP  277 (285)
T ss_pred             cCHHHHccCcccccCCC
Confidence            99999999999987653


No 92 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.25  E-value=1.1e-11  Score=129.06  Aligned_cols=91  Identities=29%  Similarity=0.424  Sum_probs=72.2

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH-hCC-----------------------CCC--
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI-SGK-----------------------KPE--   53 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl-sg~-----------------------~P~--   53 (547)
                      |||++.  ..|+..+||||+|||+.||++|++-|.|.....|+-..+. .|.                       .|.  
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~  274 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP  274 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence            899987  7899999999999999999999999998765544432111 011                       111  


Q ss_pred             --ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 --ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 --~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                        ...+..++.+.+|+++||+ +|.+|+|++|+|.||||...
T Consensus       275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence              1235678999999999999 79999999999999999874


No 93 
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.25  E-value=5.5e-12  Score=129.99  Aligned_cols=95  Identities=25%  Similarity=0.448  Sum_probs=80.3

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCc--------------hHHHHHHHHhCCC--CCccccC
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTH--------------PAQIYKKVISGKK--PEALFKV   58 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~--------------~~qI~~kIlsg~~--P~~l~~~   58 (547)
                      |||||..      ..|+.++|.||+|||+|.||+|.+||.|.=.              ...++..|..|++  |..-|..
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah  332 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH  332 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH
Confidence            8999975      3699999999999999999999999964210              1446777888876  6666888


Q ss_pred             CCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCCCC
Q 008997           59 EDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDDYD   95 (547)
Q Consensus        59 ~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~~~   95 (547)
                      ++.++++||..+|. ++..|+++.++++|||++.....
T Consensus       333 IS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  333 ISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             hhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence            99999999999999 69999999999999999976544


No 94 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.25  E-value=1.1e-11  Score=126.54  Aligned_cols=91  Identities=23%  Similarity=0.491  Sum_probs=75.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ..+++..+.....  .++..+++++++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED-EDELFDSILNDRP--HFPRWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            6899988 679999999999999999999999998754 5666666655432  2345678999999999999 599999


Q ss_pred             CH-HHHhcCCccccCCC
Q 008997           79 SA-RELLTDPFLQIDDY   94 (547)
Q Consensus        79 Sa-~ELLkHPff~~~~~   94 (547)
                      ++ .+++.||||....+
T Consensus       240 ~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         240 GVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             CChHHHHcCcccCCCCH
Confidence            86 58899999987655


No 95 
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.25  E-value=1.1e-11  Score=125.17  Aligned_cols=93  Identities=23%  Similarity=0.371  Sum_probs=73.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++||||||+++|+|++|..||.+.. ....+..+.............++.+++||.+||. +|.+||
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  277 (316)
T cd05574         199 IAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN-RDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRL  277 (316)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc-hHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCC
Confidence            5899887 568889999999999999999999998755 3444444544433222222368999999999999 699999


Q ss_pred             C----HHHHhcCCccccCCC
Q 008997           79 S----ARELLTDPFLQIDDY   94 (547)
Q Consensus        79 S----a~ELLkHPff~~~~~   94 (547)
                      +    +.+++.||||+...+
T Consensus       278 s~~~~~~~ll~~~~~~~~~~  297 (316)
T cd05574         278 GSKRGAAEIKQHPFFRGVNW  297 (316)
T ss_pred             CchhhHHHHHcCchhhcCCh
Confidence            9    999999999997654


No 96 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.25  E-value=4e-12  Score=129.83  Aligned_cols=94  Identities=24%  Similarity=0.371  Sum_probs=75.4

Q ss_pred             CCccccc-------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc--ccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL--FKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l--~~~~S~elkdLI~kCL   71 (547)
                      ||||++.       ..|+.++|||||||++|+|++|..||.+.. ....+..+........+  ...+++.+++||.+||
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll  248 (330)
T cd05601         170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT-SAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLL  248 (330)
T ss_pred             cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC-HHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHc
Confidence            6899875       357889999999999999999999998744 55666666654432111  2346899999999999


Q ss_pred             cccCCCCCHHHHhcCCccccCCCC
Q 008997           72 ATVSSRLSARELLTDPFLQIDDYD   95 (547)
Q Consensus        72 ~dPskRpSa~ELLkHPff~~~~~~   95 (547)
                      .+|.+||++.+++.||||...++.
T Consensus       249 ~~p~~R~t~~~l~~h~~~~~~~~~  272 (330)
T cd05601         249 CGQKERLGYEGLCCHPFFSKIDWN  272 (330)
T ss_pred             cChhhCCCHHHHhCCCCcCCCCHH
Confidence            899999999999999999976553


No 97 
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.24  E-value=7.4e-12  Score=125.96  Aligned_cols=100  Identities=35%  Similarity=0.491  Sum_probs=74.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||........+......+......+..++..+++||.+||. +|.+||
T Consensus       182 ~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  261 (293)
T cd06647         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRG  261 (293)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence            5899887 67889999999999999999999999864432222221112222222234467889999999999 699999


Q ss_pred             CHHHHhcCCccccCCCCchhhh
Q 008997           79 SARELLTDPFLQIDDYDSDLRM  100 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~~~~l~~  100 (547)
                      ++.+++.|+||+.......+.|
T Consensus       262 ~~~~il~h~~~~~~~~~~~~~~  283 (293)
T cd06647         262 SAKELLQHPFLKIAKPLSSLTP  283 (293)
T ss_pred             CHHHHhcCHHHhcCcccccccc
Confidence            9999999999997765444443


No 98 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.24  E-value=7.6e-12  Score=130.65  Aligned_cols=93  Identities=22%  Similarity=0.376  Sum_probs=73.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc--ccCCCHHHHHHHHHHhcccCC-
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL--FKVEDPEVRQFIEKCLATVSS-   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l--~~~~S~elkdLI~kCL~dPsk-   76 (547)
                      ||||++. ..|+.++|||||||++|||++|.+||.+.. ....+..+........+  ...+++++++||.+||.+|.+ 
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r  293 (377)
T cd05629         215 IAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN-SHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENR  293 (377)
T ss_pred             cCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC-HHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhc
Confidence            6899987 679999999999999999999999998744 55666666654322112  224689999999999986544 


Q ss_pred             --CCCHHHHhcCCccccCCC
Q 008997           77 --RLSARELLTDPFLQIDDY   94 (547)
Q Consensus        77 --RpSa~ELLkHPff~~~~~   94 (547)
                        |+++.+++.||||+..++
T Consensus       294 ~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         294 LGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             CCCCCHHHHhcCCCcCCCCH
Confidence              569999999999987654


No 99 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.24  E-value=1.1e-11  Score=127.22  Aligned_cols=92  Identities=20%  Similarity=0.410  Sum_probs=72.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC--------chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT--------HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s--------~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||++. ..|+.++|+|||||++|+|++|..||....        ....+++.+.....  ..+..+++++++||.+||
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L  240 (329)
T cd05588         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKASSVLKGFL  240 (329)
T ss_pred             cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHh
Confidence            6899988 679999999999999999999999996321        11234444544433  234567899999999999


Q ss_pred             c-ccCCCCC------HHHHhcCCccccCCC
Q 008997           72 A-TVSSRLS------ARELLTDPFLQIDDY   94 (547)
Q Consensus        72 ~-dPskRpS------a~ELLkHPff~~~~~   94 (547)
                      . +|.+|++      +.++++||||....+
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~  270 (329)
T cd05588         241 NKDPKERLGCHPQTGFRDIKSHPFFRNIDW  270 (329)
T ss_pred             ccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            9 6999987      789999999987654


No 100
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.24  E-value=1.3e-11  Score=128.03  Aligned_cols=90  Identities=30%  Similarity=0.452  Sum_probs=67.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC---------------------CC-----
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK---------------------PE-----   53 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~---------------------P~-----   53 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ....+.++.....                     |.     
T Consensus       192 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (364)
T cd07875         192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS  270 (364)
T ss_pred             CCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCC
Confidence            6999988 679999999999999999999999998754 3333333322100                     00     


Q ss_pred             --------------ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           54 --------------ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        54 --------------~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                                    ......+..+++||.+||. +|.+|||+.++|+||||..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         271 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             hHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                          0011235678999999999 7999999999999999974


No 101
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.24  E-value=1.6e-11  Score=122.15  Aligned_cols=97  Identities=33%  Similarity=0.519  Sum_probs=74.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... .......+.....+. .....++..+++||.+||. +|.+|
T Consensus       183 ~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R  261 (286)
T cd06614         183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP-PLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKR  261 (286)
T ss_pred             CCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhC
Confidence            5799877 668999999999999999999999998644 333333343333322 2223368899999999999 59999


Q ss_pred             CCHHHHhcCCccccCCCCchh
Q 008997           78 LSARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~~~~l   98 (547)
                      |++.+++.|+||....+...+
T Consensus       262 pt~~~il~~~~~~~~~~~~~~  282 (286)
T cd06614         262 PSAEELLQHPFLKKACPKEEF  282 (286)
T ss_pred             cCHHHHhhChHhhccCchHhh
Confidence            999999999999986554433


No 102
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.24  E-value=3.7e-12  Score=130.24  Aligned_cols=92  Identities=22%  Similarity=0.448  Sum_probs=76.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...+...+.....  .++..+++++++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEI--RFPRTLSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             CCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-HHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhC
Confidence            7999987 679999999999999999999999998754 5566666655443  2345679999999999999 699997


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           ++.++++||||....+.
T Consensus       240 ~~~~~~~~~il~h~~~~~~~~~  261 (325)
T cd05594         240 GGGPDDAKEIMQHKFFAGIVWQ  261 (325)
T ss_pred             CCCCCCHHHHhcCCCcCCCCHH
Confidence                 89999999999876543


No 103
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.24  E-value=1.9e-11  Score=121.53  Aligned_cols=94  Identities=23%  Similarity=0.477  Sum_probs=72.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc------hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH------PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~------~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.....      .......+.....+.......++++++||.+||. 
T Consensus       160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  239 (279)
T cd06619         160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRK  239 (279)
T ss_pred             cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhC
Confidence            5899987 6789999999999999999999999964221      1223333333333332334568899999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccCCC
Q 008997           73 TVSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~~~   94 (547)
                      +|.+||++.+++.||||+..+.
T Consensus       240 ~P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         240 QPKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             ChhhCCCHHHHhcCcccccccC
Confidence            6999999999999999987543


No 104
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.24  E-value=1.6e-11  Score=120.27  Aligned_cols=87  Identities=36%  Similarity=0.563  Sum_probs=70.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||+|+++|+|++|..||.+.... ..+..+.....+ ..+..++..+++||++||. +|.+||
T Consensus       179 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (267)
T cd06628         179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-QAIFKIGENASP-EIPSNISSEAIDFLEKTFEIDHNKRP  256 (267)
T ss_pred             cChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-HHHHHHhccCCC-cCCcccCHHHHHHHHHHccCCchhCc
Confidence            5899887 67888999999999999999999999876533 333344443332 2345678999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       257 ~~~~il~~~~~  267 (267)
T cd06628         257 TAAELLKHPFL  267 (267)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997


No 105
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.24  E-value=1.9e-11  Score=118.25  Aligned_cols=93  Identities=28%  Similarity=0.394  Sum_probs=74.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ...++..+..+..+.......++.+.+|+.+||. +|.+||
T Consensus       168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp  246 (265)
T cd05579         168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-PEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRL  246 (265)
T ss_pred             cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcC
Confidence            5788876 568889999999999999999999998644 5666666666554322222248999999999999 699999


Q ss_pred             CH---HHHhcCCccccCCC
Q 008997           79 SA---RELLTDPFLQIDDY   94 (547)
Q Consensus        79 Sa---~ELLkHPff~~~~~   94 (547)
                      ++   .++|+||||...+|
T Consensus       247 t~~~~~~~l~~~~~~~~~~  265 (265)
T cd05579         247 GAKSIEEIKNHPFFKGIDW  265 (265)
T ss_pred             CCccHHHHhcCccccCCCC
Confidence            99   99999999986653


No 106
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.24  E-value=1.5e-11  Score=119.43  Aligned_cols=91  Identities=33%  Similarity=0.551  Sum_probs=74.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC--chHHHHHHHHhCCCCCccccC-CCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT--HPAQIYKKVISGKKPEALFKV-EDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s--~~~qI~~kIlsg~~P~~l~~~-~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||....  ...++...+.....+. .... ++..+.+||.+||. +|+
T Consensus       167 ~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~  245 (264)
T cd06623         167 MSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS-LPAEEFSPEFRDFISACLQKDPK  245 (264)
T ss_pred             cCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC-CCcccCCHHHHHHHHHHccCChh
Confidence            5899887 678889999999999999999999998764  3455566666544433 2333 78899999999999 599


Q ss_pred             CCCCHHHHhcCCccccC
Q 008997           76 SRLSARELLTDPFLQID   92 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~   92 (547)
                      +||++.+++.||||+..
T Consensus       246 ~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         246 KRPSAAELLQHPFIKKA  262 (264)
T ss_pred             hCCCHHHHHhCHHHHhc
Confidence            99999999999999764


No 107
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.24  E-value=6.6e-12  Score=144.82  Aligned_cols=94  Identities=26%  Similarity=0.447  Sum_probs=81.2

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc--cCCCHHHHHHHHHHhc
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF--KVEDPEVRQFIEKCLA   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~--~~~S~elkdLI~kCL~   72 (547)
                      ++||++.      +.|+..||+||+||++|||+.|..||...+ ...+|.+|+..+-...+|  ..+|+++++||.+++.
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-lveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~  321 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-LVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC  321 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-HHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc
Confidence            4899986      469999999999999999999999999844 788999998764332333  3489999999999999


Q ss_pred             ccCCCCC---HHHHhcCCccccCCCC
Q 008997           73 TVSSRLS---ARELLTDPFLQIDDYD   95 (547)
Q Consensus        73 dPskRpS---a~ELLkHPff~~~~~~   95 (547)
                      +|..|+.   +.++..||||.+.+|.
T Consensus       322 ~~e~RLgrngiedik~HpFF~g~~W~  347 (1317)
T KOG0612|consen  322 DREVRLGRNGIEDIKNHPFFEGIDWD  347 (1317)
T ss_pred             ChhhhcccccHHHHHhCccccCCChh
Confidence            9999988   9999999999999884


No 108
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.24  E-value=1.1e-11  Score=126.82  Aligned_cols=92  Identities=25%  Similarity=0.442  Sum_probs=72.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCC---chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECT---HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s---~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      ||||++.  ..++.++|||||||++|+|++|..||....   ....+...+.....  .++..+++.+++||.+||. +|
T Consensus       173 ~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp  250 (332)
T cd05614         173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP--PFPSFIGPEAQDLLHKLLRKDP  250 (332)
T ss_pred             cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHcCCCH
Confidence            6999987  347889999999999999999999996432   22344444544432  2345679999999999999 69


Q ss_pred             CCCC-----CHHHHhcCCccccCCC
Q 008997           75 SSRL-----SARELLTDPFLQIDDY   94 (547)
Q Consensus        75 skRp-----Sa~ELLkHPff~~~~~   94 (547)
                      .+||     ++.++++||||+...+
T Consensus       251 ~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         251 KKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            9999     7889999999987654


No 109
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.24  E-value=2e-11  Score=118.81  Aligned_cols=87  Identities=23%  Similarity=0.453  Sum_probs=72.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ...+...+..+..+. .+...+..++++|.+||. +|.+||
T Consensus       168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp  245 (256)
T cd08218         168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-MKNLVLKIIRGSYPP-VSSHYSYDLRNLVSQLFKRNPRDRP  245 (256)
T ss_pred             cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-HHHHHHHHhcCCCCC-CcccCCHHHHHHHHHHhhCChhhCc
Confidence            5899877 668889999999999999999999998643 556666666665543 344578999999999999 599999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       246 ~~~~vl~~~~~  256 (256)
T cd08218         246 SVNSILEKNFI  256 (256)
T ss_pred             CHHHHhhCcCC
Confidence            99999999997


No 110
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.23  E-value=1.5e-11  Score=127.07  Aligned_cols=91  Identities=30%  Similarity=0.441  Sum_probs=67.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC----------------------CC------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG----------------------KK------   51 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg----------------------~~------   51 (547)
                      ||||++. ..|+.++|||||||++|+|++|+.||.+.... ..+..+...                      ..      
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (355)
T cd07874         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT  263 (355)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccccc
Confidence            6999988 67999999999999999999999999875422 222111110                      00      


Q ss_pred             -CC-----------ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           52 -PE-----------ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        52 -P~-----------~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                       +.           ......+..+++||.+||. +|.+|||+.++|+||||...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             chhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence             00           0112235678999999999 69999999999999999754


No 111
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.23  E-value=1.8e-11  Score=121.65  Aligned_cols=87  Identities=23%  Similarity=0.460  Sum_probs=67.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch----HHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP----AQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~----~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      ||||++. ..|+.++|+||+|+++|+|++|..||......    ..+....   ..+...++..++.+++||.+||+ +|
T Consensus       173 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p  249 (267)
T PHA03390        173 FSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---QKKLPFIKNVSKNANDFVQSMLKYNI  249 (267)
T ss_pred             cChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---cccCCcccccCHHHHHHHHHHhccCh
Confidence            6899988 67899999999999999999999999753321    1111111   22223445689999999999999 69


Q ss_pred             CCCCC-HHHHhcCCccc
Q 008997           75 SSRLS-ARELLTDPFLQ   90 (547)
Q Consensus        75 skRpS-a~ELLkHPff~   90 (547)
                      .+|++ ++++|+||||.
T Consensus       250 ~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        250 NYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             hhCCchHHHHhcCCccc
Confidence            99996 69999999996


No 112
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.23  E-value=1.9e-11  Score=117.17  Aligned_cols=89  Identities=39%  Similarity=0.615  Sum_probs=71.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||....+.......+..+......+...+..+++||.+||. +|.+||
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp  249 (260)
T cd06606         170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRP  249 (260)
T ss_pred             cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCC
Confidence            4788877 55889999999999999999999999875544444444443333334455668999999999999 599999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       250 ~~~~ll~~~~~  260 (260)
T cd06606         250 TADELLQHPFL  260 (260)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997


No 113
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.23  E-value=1.1e-11  Score=123.95  Aligned_cols=93  Identities=25%  Similarity=0.403  Sum_probs=72.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchH---HHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPA---QIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~---qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++. ..++.++||||+|+++|+|++|..||.+.....   .+...+..+  +...+..+++.+++||.+||. +|.
T Consensus       168 ~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~  245 (285)
T cd05605         168 MAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSEAARSICRQLLTKDPG  245 (285)
T ss_pred             cCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCHHHHHHHHHHccCCHH
Confidence            6899987 678999999999999999999999998743211   222222222  222345578999999999999 699


Q ss_pred             CCC-----CHHHHhcCCccccCCCC
Q 008997           76 SRL-----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        76 kRp-----Sa~ELLkHPff~~~~~~   95 (547)
                      +||     +++++++||||...++.
T Consensus       246 ~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05605         246 FRLGCRGEGAEEVKAHPFFRTANFK  270 (285)
T ss_pred             HhcCCCCCCHHHHhcCcCccCCCHH
Confidence            999     89999999999876554


No 114
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.23  E-value=1.8e-11  Score=121.84  Aligned_cols=89  Identities=27%  Similarity=0.382  Sum_probs=67.1

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--CC-----------------C-------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--KK-----------------P-------   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~~-----------------P-------   52 (547)
                      +|||++.  ..++.++||||||+++|+|++|..||.+........ ++...  ..                 +       
T Consensus       178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (295)
T cd07837         178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLL-HIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDL  256 (295)
T ss_pred             CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHHHhCCCChhhCcchhhccchhhcCcccchhH
Confidence            5899876  457899999999999999999999998755433332 22211  00                 0       


Q ss_pred             CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccc
Q 008997           53 EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQ   90 (547)
Q Consensus        53 ~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~   90 (547)
                      ....+.+++++++||.+||. +|.+||++.+++.||||+
T Consensus       257 ~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         257 SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            00013468889999999999 699999999999999985


No 115
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.23  E-value=2.3e-11  Score=119.44  Aligned_cols=89  Identities=31%  Similarity=0.489  Sum_probs=70.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcccCCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLATVSSRLS   79 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~dPskRpS   79 (547)
                      ||||++. ..++.++|+||||+++|+|++|..||........+. .+.........+...+..+.++|.+||.+|..||+
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~p~~Rp~  254 (265)
T cd06652         176 MSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF-KIATQPTNPVLPPHVSDHCRDFLKRIFVEAKLRPS  254 (265)
T ss_pred             cChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH-HHhcCCCCCCCchhhCHHHHHHHHHHhcChhhCCC
Confidence            6899887 678899999999999999999999998754333333 33333222234455688899999999988999999


Q ss_pred             HHHHhcCCccc
Q 008997           80 ARELLTDPFLQ   90 (547)
Q Consensus        80 a~ELLkHPff~   90 (547)
                      ++++++|||+.
T Consensus       255 ~~~il~~~~~~  265 (265)
T cd06652         255 ADELLRHTFVH  265 (265)
T ss_pred             HHHHhcCcccC
Confidence            99999999984


No 116
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.23  E-value=1.5e-11  Score=126.65  Aligned_cols=91  Identities=24%  Similarity=0.479  Sum_probs=67.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHH------------------------------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIY------------------------------------   43 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~------------------------------------   43 (547)
                      ||||++. ..|+.++|+|||||++|+|++|+.||.... ...+.                                    
T Consensus       169 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (333)
T cd06650         169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPD-AKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRP  247 (333)
T ss_pred             cCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcc-hhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccc
Confidence            6899988 678999999999999999999999997532 22111                                    


Q ss_pred             --------HHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           44 --------KKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        44 --------~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                              ..+.....+.......+.++++||.+||. +|.+||++.+++.||||+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         248 PMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             cccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                    11111111111112357889999999999 69999999999999999864


No 117
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.23  E-value=1.6e-11  Score=128.84  Aligned_cols=96  Identities=29%  Similarity=0.395  Sum_probs=73.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC--CCCccccCCCHHHHHHHHHHhc-c--c
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK--KPEALFKVEDPEVRQFIEKCLA-T--V   74 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~--~P~~l~~~~S~elkdLI~kCL~-d--P   74 (547)
                      ||||++. ..|+.++|||||||++|||++|..||.... ......++....  ........+++++++||.+++. .  +
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~  293 (381)
T cd05626         215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT-PTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEER  293 (381)
T ss_pred             cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC-HHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccc
Confidence            6999987 679999999999999999999999998754 444444444322  2222233578999999999665 2  5


Q ss_pred             CCCCCHHHHhcCCccccCCCCch
Q 008997           75 SSRLSARELLTDPFLQIDDYDSD   97 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~~~~~~   97 (547)
                      ..|+++.+++.||||....+...
T Consensus       294 ~~R~~~~~~l~hp~f~~~~~~~~  316 (381)
T cd05626         294 LGRNGADDIKAHPFFSEVDFSSD  316 (381)
T ss_pred             cCCCCHHHHhcCcccCCCChhHH
Confidence            66999999999999998766543


No 118
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.23  E-value=2.1e-11  Score=120.11  Aligned_cols=88  Identities=23%  Similarity=0.401  Sum_probs=65.5

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCC------------------CC-----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKK------------------PE-----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~------------------P~-----   53 (547)
                      +|||++.  +.++.++||||+||++|+|++|.+||.+.+ ....+..+..  +..                  +.     
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (282)
T cd07831         165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN-ELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTG  243 (282)
T ss_pred             CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC-HHHHHHHHHHHcCCCCHHHHHhhcccccccccCccccccc
Confidence            5899865  457889999999999999999999998754 3333222221  000                  00     


Q ss_pred             --ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 --ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 --~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                        ......+..+++||.+||. +|.+||++.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         244 LRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence              0012457899999999999 59999999999999997


No 119
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.22  E-value=2e-11  Score=125.03  Aligned_cols=92  Identities=21%  Similarity=0.417  Sum_probs=77.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|+|++|.+||.+.. ...++..+......  .+..+++++++|+.+||. +|.+|+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~p~~R~  244 (323)
T cd05615         168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-EDELFQSIMEHNVS--YPKSLSKEAVSICKGLMTKHPSKRL  244 (323)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHhhCC
Confidence            6999988 679999999999999999999999998754 56777777765542  345678999999999999 599999


Q ss_pred             C-----HHHHhcCCccccCCCC
Q 008997           79 S-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~   95 (547)
                      +     ..++++||||+..++.
T Consensus       245 ~~~~~~~~~i~~h~~f~~~~~~  266 (323)
T cd05615         245 GCGPEGERDIREHAFFRRIDWD  266 (323)
T ss_pred             CCCCCCHHHHhcCcccCCCCHH
Confidence            7     5789999999987653


No 120
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.22  E-value=1.8e-11  Score=123.76  Aligned_cols=91  Identities=20%  Similarity=0.274  Sum_probs=68.4

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--C-------------------CCC----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--K-------------------KPE----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~-------------------~P~----   53 (547)
                      +|||++.  ..|+.++||||+|+++|+|++|++||.+.. .......+...  .                   .+.    
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (309)
T cd07872         171 RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST-VEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQ  249 (309)
T ss_pred             cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCC
Confidence            5899886  468899999999999999999999998754 22222222110  0                   000    


Q ss_pred             ---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         ...+.+++++++||.+||. +|.+|||+.+++.||||+..
T Consensus       250 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         250 PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence               0112468899999999999 69999999999999999864


No 121
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.22  E-value=1.7e-11  Score=122.50  Aligned_cols=93  Identities=25%  Similarity=0.396  Sum_probs=70.5

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchH-HHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPA-QIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~-qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.  ..++.++|+||+|+++|+|++|..||....... ....... ...+..++..+++++++||.+||. +|.+
T Consensus       162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~  240 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSK  240 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHH
Confidence            6899886  458899999999999999999999997532211 1111111 112233455678999999999999 6999


Q ss_pred             CC-----CHHHHhcCCccccCCC
Q 008997           77 RL-----SARELLTDPFLQIDDY   94 (547)
Q Consensus        77 Rp-----Sa~ELLkHPff~~~~~   94 (547)
                      |+     +++++++||||+...+
T Consensus       241 R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         241 RLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             hcCCCCCCHHHHHhCccccCCCH
Confidence            99     6999999999998654


No 122
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.22  E-value=2.2e-11  Score=122.09  Aligned_cols=93  Identities=28%  Similarity=0.588  Sum_probs=73.0

Q ss_pred             CCccccc-c----cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc-cCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE-E----EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF-KVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~-~----~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~-~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++. .    .++.++||||||+++|+|++|+.||.......+.+..+.....+.... ..++.++++|+.+||. +
T Consensus       181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  260 (296)
T cd06618         181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKD  260 (296)
T ss_pred             cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCC
Confidence            5899886 2    378899999999999999999999976443345555665554332222 2368899999999999 6


Q ss_pred             cCCCCCHHHHhcCCccccCC
Q 008997           74 VSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        74 PskRpSa~ELLkHPff~~~~   93 (547)
                      |.+||++.+++.|+||....
T Consensus       261 p~~Rp~~~~il~~~~~~~~~  280 (296)
T cd06618         261 HRKRPKYRELLQHPFIRRYE  280 (296)
T ss_pred             hhhCCCHHHHhcChhhhccc
Confidence            99999999999999998643


No 123
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.22  E-value=7.7e-12  Score=130.39  Aligned_cols=94  Identities=29%  Similarity=0.381  Sum_probs=74.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. .......+.....  .......+++++++||.+|+.+|.+|
T Consensus       211 ~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~~p~~R  289 (376)
T cd05598         211 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT-PAETQLKVINWETTLHIPSQAKLSREASDLILRLCCGAEDR  289 (376)
T ss_pred             cCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC-HHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhcCHhhc
Confidence            7999988 679999999999999999999999998754 4445455544332  11123357899999999988789999


Q ss_pred             C---CHHHHhcCCccccCCCC
Q 008997           78 L---SARELLTDPFLQIDDYD   95 (547)
Q Consensus        78 p---Sa~ELLkHPff~~~~~~   95 (547)
                      +   ++.++++||||+..++.
T Consensus       290 ~~~~t~~ell~h~~~~~~~~~  310 (376)
T cd05598         290 LGKNGADEIKAHPFFKGIDFA  310 (376)
T ss_pred             CCCCCHHHHhCCCCcCCCCHH
Confidence            9   99999999999976543


No 124
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.22  E-value=1.5e-11  Score=126.55  Aligned_cols=92  Identities=18%  Similarity=0.390  Sum_probs=72.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC--------chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT--------HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s--------~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||....        ....++..+.....  .++...+..+++||.+||
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~ll~~~L  240 (329)
T cd05618         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFL  240 (329)
T ss_pred             cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHh
Confidence            6899988 678999999999999999999999995211        11234444444433  244567899999999999


Q ss_pred             c-ccCCCCC------HHHHhcCCccccCCC
Q 008997           72 A-TVSSRLS------ARELLTDPFLQIDDY   94 (547)
Q Consensus        72 ~-dPskRpS------a~ELLkHPff~~~~~   94 (547)
                      . +|.+|++      +.++++||||+..+|
T Consensus       241 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         241 NKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             cCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            9 6999998      579999999987654


No 125
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.22  E-value=3.2e-11  Score=121.78  Aligned_cols=93  Identities=25%  Similarity=0.388  Sum_probs=72.4

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++.    +.++.++||||||+++|+|++|..||.... .......+.....+......++..+++||.+||. +|.
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  256 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQ  256 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc-HHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChh
Confidence            6899874    568899999999999999999999998744 3333333443333332333467899999999999 699


Q ss_pred             CCCCHHHHhcCCccccCCC
Q 008997           76 SRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~~~   94 (547)
                      +||++.+++.||||.....
T Consensus       257 ~Rp~~~~il~~~~~~~~~~  275 (307)
T cd06607         257 DRPSSEELLKHRFVLRERP  275 (307)
T ss_pred             hCcCHHHHhcChhhcccCC
Confidence            9999999999999987543


No 126
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.22  E-value=2.4e-11  Score=122.09  Aligned_cols=91  Identities=19%  Similarity=0.285  Sum_probs=68.0

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC---C------------------CCC----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG---K------------------KPE----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg---~------------------~P~----   53 (547)
                      +|||++.  ..++.++||||||+++|+|++|++||.+... ......+...   .                  .+.    
T Consensus       171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (301)
T cd07873         171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD  249 (301)
T ss_pred             cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCChhhchhhhccccccccccCccccc
Confidence            5899876  4578899999999999999999999987543 3222222110   0                  000    


Q ss_pred             ---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         .....+++.+++||.+||. +|.+|||+.++++||||+..
T Consensus       250 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         250 CLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             cHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence               0112467889999999999 69999999999999999864


No 127
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.22  E-value=2.6e-11  Score=120.00  Aligned_cols=88  Identities=24%  Similarity=0.377  Sum_probs=65.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC-C-------------------C-------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG-K-------------------K-------   51 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg-~-------------------~-------   51 (547)
                      ||||++.  ..++.++|+||||+++|+|++|.+||.......+... +... .                   .       
T Consensus       166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07835         166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFR-IFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQD  244 (283)
T ss_pred             CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhCCCChHHhhhhhhchhhhhhcccccccc
Confidence            6899876  3578899999999999999999999987543222222 2110 0                   0       


Q ss_pred             CCccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           52 PEALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        52 P~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      .....+.++..+.+||.+||. +|.+||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         245 LSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            001123457889999999999 69999999999999998


No 128
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.21  E-value=2.1e-11  Score=121.59  Aligned_cols=93  Identities=22%  Similarity=0.359  Sum_probs=71.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++. ..|+.++||||+||++|+|++|..||.....   ...+...+.....+. ....+++++++||.+||. +|.
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~P~  239 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEESKDICRLFLAKKPE  239 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHHHHHHHHHhccCHh
Confidence            6899987 6699999999999999999999999975322   223344444333321 223578999999999999 699


Q ss_pred             CCCCH----HHHhcCCccccCCC
Q 008997           76 SRLSA----RELLTDPFLQIDDY   94 (547)
Q Consensus        76 kRpSa----~ELLkHPff~~~~~   94 (547)
                      +||++    .+++.|+||+..++
T Consensus       240 ~R~~~~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         240 DRLGSREKNDDPRKHEFFKTINF  262 (277)
T ss_pred             hCCCCccchhhhhcChhhcCCCH
Confidence            99999    67889999987654


No 129
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21  E-value=1.4e-11  Score=132.83  Aligned_cols=90  Identities=26%  Similarity=0.431  Sum_probs=79.0

Q ss_pred             Cccccc-ccCCc-ccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            2 APEVYE-EEYNE-LVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         2 APEVL~-~~Y~~-kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||++. ..|+. ++||||+|||+|.|+||++||... +..+.+..|+.+++.  .+..++.++++||..||+ +|.+|.
T Consensus       186 APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA-NDSETLTmImDCKYt--vPshvS~eCrdLI~sMLvRdPkkRA  262 (864)
T KOG4717|consen  186 APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA-NDSETLTMIMDCKYT--VPSHVSKECRDLIQSMLVRDPKKRA  262 (864)
T ss_pred             CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc-cchhhhhhhhccccc--CchhhhHHHHHHHHHHHhcCchhhc
Confidence            899988 67884 899999999999999999999985 467778888887763  456789999999999999 699999


Q ss_pred             CHHHHhcCCccccCCC
Q 008997           79 SARELLTDPFLQIDDY   94 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~   94 (547)
                      +.++|..++|++..+.
T Consensus       263 slEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  263 SLEEIVSTSWLQAGDR  278 (864)
T ss_pred             cHHHHhccccccCCCC
Confidence            9999999999998654


No 130
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.21  E-value=3e-11  Score=117.14  Aligned_cols=87  Identities=25%  Similarity=0.460  Sum_probs=70.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... .......+..+..+. .....+..++++|.+||. +|++||
T Consensus       169 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp  246 (257)
T cd08225         169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-LHQLVLKICQGYFAP-ISPNFSRDLRSLISQLFKVSPRDRP  246 (257)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHhcccCCC-CCCCCCHHHHHHHHHHhccChhhCc
Confidence            5799877 668899999999999999999999998644 444444455444332 234568899999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++||||
T Consensus       247 t~~~ll~~~~~  257 (257)
T cd08225         247 SITSILKRPFL  257 (257)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997


No 131
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.21  E-value=1.6e-11  Score=123.16  Aligned_cols=93  Identities=24%  Similarity=0.407  Sum_probs=71.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch--HHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP--AQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~--~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++. ..|+.++||||+|+++|+|++|..||......  ......+... .+...+..+++++++|+.+||+ +|.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~  246 (285)
T cd05630         168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VQEEYSEKFSPDARSLCKMLLCKDPKE  246 (285)
T ss_pred             cChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-hhhhcCccCCHHHHHHHHHHhhcCHHH
Confidence            6899987 67999999999999999999999999864321  1112222111 1122345578999999999999 6999


Q ss_pred             CCC-----HHHHhcCCccccCCC
Q 008997           77 RLS-----ARELLTDPFLQIDDY   94 (547)
Q Consensus        77 RpS-----a~ELLkHPff~~~~~   94 (547)
                      |++     +.++++||||+...+
T Consensus       247 R~s~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05630         247 RLGCQGGGAREVKEHPLFKQINF  269 (285)
T ss_pred             ccCCCCCchHHHHcChhhhccCH
Confidence            999     999999999987543


No 132
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.21  E-value=3.5e-11  Score=116.56  Aligned_cols=87  Identities=23%  Similarity=0.469  Sum_probs=71.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.+.. .......+..+... ..+..+++.+++|+.+||. +|.+||
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp  245 (256)
T cd08220         168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-LPALVLKIMSGTFA-PISDRYSPDLRQLILSMLNLDPSKRP  245 (256)
T ss_pred             cCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-hHHHHHHHHhcCCC-CCCCCcCHHHHHHHHHHccCChhhCC
Confidence            5899987 567889999999999999999999998754 44555555554432 2334578999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       246 t~~~ll~~p~~  256 (256)
T cd08220         246 QLSQIMAQPIC  256 (256)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997


No 133
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.21  E-value=3.2e-11  Score=117.91  Aligned_cols=90  Identities=31%  Similarity=0.535  Sum_probs=69.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch--HHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP--AQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~--~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      +|||++. ..++.++|+||+|+++|+|++|..||......  ......+.........+...++++++|+.+||. +|.+
T Consensus       175 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  254 (268)
T cd06630         175 MAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPED  254 (268)
T ss_pred             eCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCccc
Confidence            5899887 67889999999999999999999999643321  222222322333334445678999999999999 6999


Q ss_pred             CCCHHHHhcCCccc
Q 008997           77 RLSARELLTDPFLQ   90 (547)
Q Consensus        77 RpSa~ELLkHPff~   90 (547)
                      ||++.++++||||+
T Consensus       255 R~~~~~ll~~~~~~  268 (268)
T cd06630         255 RPPSRELLKHPVFR  268 (268)
T ss_pred             CcCHHHHhcCcccC
Confidence            99999999999985


No 134
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.21  E-value=2.3e-11  Score=126.87  Aligned_cols=91  Identities=26%  Similarity=0.426  Sum_probs=69.2

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-----------------------CC-CCC-
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-----------------------GK-KPE-   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-----------------------g~-~P~-   53 (547)
                      ||||++.  ..|+.++||||+||++|||++|+.||.+.. ....+..+..                       .. .+. 
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (372)
T cd07853         171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS-PIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPS  249 (372)
T ss_pred             CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc
Confidence            6899887  458999999999999999999999998754 3333332221                       11 111 


Q ss_pred             -----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 -----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 -----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                           ......++++++||.+||. +|.+||++.++|.||||+..
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         250 LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence                 1123357899999999999 69999999999999999875


No 135
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.21  E-value=3.7e-11  Score=116.29  Aligned_cols=87  Identities=29%  Similarity=0.435  Sum_probs=73.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ...+...+..+..+ .++...+..+.+|+.+||. +|.+||
T Consensus       177 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~Rp  254 (265)
T cd08217         177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKFR-RIPYRYSSELNEVIKSMLNVDPDKRP  254 (265)
T ss_pred             cChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccCC
Confidence            5899987 568889999999999999999999998754 55666666665543 3445678999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++|||+
T Consensus       255 ~~~~il~~~~~  265 (265)
T cd08217         255 STEELLQLPLI  265 (265)
T ss_pred             CHHHHhhCCCC
Confidence            99999999996


No 136
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.21  E-value=1.4e-11  Score=124.29  Aligned_cols=94  Identities=34%  Similarity=0.520  Sum_probs=71.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.+......++.....+..+...+..+++.+++|+.+||. +|.+||
T Consensus       182 ~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  261 (297)
T cd06656         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRG  261 (297)
T ss_pred             cCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCc
Confidence            5789887 66889999999999999999999999874432222222222222222344578899999999999 699999


Q ss_pred             CHHHHhcCCccccCCC
Q 008997           79 SARELLTDPFLQIDDY   94 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~   94 (547)
                      ++.++++||||+....
T Consensus       262 s~~~il~~~~~~~~~~  277 (297)
T cd06656         262 SAKELLQHPFLKLAKP  277 (297)
T ss_pred             CHHHHhcCchhccccc
Confidence            9999999999986543


No 137
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.20  E-value=3.6e-11  Score=124.47  Aligned_cols=91  Identities=29%  Similarity=0.418  Sum_probs=68.1

Q ss_pred             CCccccc-----cc-CCcccchHhHHHHHHHHHhCCCCCCCCCc--hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc
Q 008997            1 MAPEVYE-----EE-YNELVDIYSFGMCILEMVTFDYPYSECTH--PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA   72 (547)
Q Consensus         1 MAPEVL~-----~~-Y~~kvDIWSlGVILyELLtG~~PF~g~s~--~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~   72 (547)
                      ||||++.     +. ++.++|||||||++|||++|+.||.....  ...+...+.... +...+..+++++++||.+||.
T Consensus       235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~  313 (353)
T PLN00034        235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ-PPEAPATASREFRHFISCCLQ  313 (353)
T ss_pred             cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-CCCCCCccCHHHHHHHHHHcc
Confidence            6899874     22 34689999999999999999999974221  122222232222 223345678999999999999


Q ss_pred             -ccCCCCCHHHHhcCCccccC
Q 008997           73 -TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        73 -dPskRpSa~ELLkHPff~~~   92 (547)
                       +|.+||++.++++||||...
T Consensus       314 ~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        314 REPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             CChhhCcCHHHHhcCcccccC
Confidence             69999999999999999875


No 138
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.20  E-value=3.7e-11  Score=121.02  Aligned_cols=89  Identities=24%  Similarity=0.388  Sum_probs=62.2

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCch---------HHHHHHHHh-CCC--------------C--
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHP---------AQIYKKVIS-GKK--------------P--   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~---------~qI~~kIls-g~~--------------P--   52 (547)
                      ||||++.  ..|+.++||||+||++|||++|.+||......         .++...+.. +..              +  
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (317)
T cd07867         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTL  261 (317)
T ss_pred             cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhh
Confidence            6899987  45899999999999999999999999743210         111110000 000              0  


Q ss_pred             ------------------CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           53 ------------------EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        53 ------------------~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                                        .......+..+++||.+||. +|.+|||+.|+|+||||
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         262 QKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                              00011235678899999999 69999999999999998


No 139
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.20  E-value=3.4e-11  Score=118.81  Aligned_cols=89  Identities=28%  Similarity=0.479  Sum_probs=66.4

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CC-------------------CCCc----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GK-------------------KPEA----   54 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~-------------------~P~~----   54 (547)
                      +|||++.  ..++.++||||||+++|+|++|.+||.+......+...... +.                   .+..    
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07847         167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE  246 (286)
T ss_pred             CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence            5899876  45889999999999999999999999876543333321110 00                   0000    


Q ss_pred             ----cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           55 ----LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        55 ----l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                          ....++..+.+|+.+||. +|.+||++.+++.||||
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                012457889999999999 69999999999999998


No 140
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.20  E-value=7.2e-12  Score=136.36  Aligned_cols=85  Identities=31%  Similarity=0.432  Sum_probs=69.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||||+. +..+.|+|||||||+|||||||+.||..... ..|+--|-+..+....+..++..++=||+.||. +|..||
T Consensus       278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds-sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRP  356 (904)
T KOG4721|consen  278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS-SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRP  356 (904)
T ss_pred             hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch-heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCc
Confidence            8999999 8899999999999999999999999986442 223223333333334456788999999999999 699999


Q ss_pred             CHHHHhcC
Q 008997           79 SARELLTD   86 (547)
Q Consensus        79 Sa~ELLkH   86 (547)
                      ++.++|.|
T Consensus       357 SFrqil~H  364 (904)
T KOG4721|consen  357 SFRQILLH  364 (904)
T ss_pred             cHHHHHHH
Confidence            99999988


No 141
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.20  E-value=2.8e-11  Score=124.23  Aligned_cols=93  Identities=20%  Similarity=0.394  Sum_probs=73.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC------chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT------HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s------~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-   72 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||....      ....++..+.....  ..+..+++.+++||.+||. 
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~  240 (327)
T cd05617         163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI--RIPRFLSVKASHVLKGFLNK  240 (327)
T ss_pred             CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC--CCCCCCCHHHHHHHHHHhcc
Confidence            6999987 779999999999999999999999996321      12334444444332  3455678999999999999 


Q ss_pred             ccCCCCC------HHHHhcCCccccCCCC
Q 008997           73 TVSSRLS------ARELLTDPFLQIDDYD   95 (547)
Q Consensus        73 dPskRpS------a~ELLkHPff~~~~~~   95 (547)
                      +|.+|++      +.+++.||||...++.
T Consensus       241 dP~~R~~~~~~~~~~~i~~h~~f~~~~~~  269 (327)
T cd05617         241 DPKERLGCQPQTGFSDIKSHTFFRSIDWD  269 (327)
T ss_pred             CHHHcCCCCCCCCHHHHHcCCCCCCCCHH
Confidence            6999997      5799999999987653


No 142
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.19  E-value=3.6e-11  Score=119.87  Aligned_cols=93  Identities=27%  Similarity=0.471  Sum_probs=72.0

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCc--hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTH--PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~--~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++.  ..|+.++||||+|+++|+|++|..||.....  ...+...+...  +...+...++.+.+++.+||. +|.
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l~~~p~  239 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVELPDSFSPELRSLLEGLLQRDVN  239 (278)
T ss_pred             cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc--CCCCCCcCCHHHHHHHHHHhhcCHH
Confidence            6899987  3589999999999999999999999986421  12222222221  223445578999999999999 599


Q ss_pred             CCC-----CHHHHhcCCccccCCCC
Q 008997           76 SRL-----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        76 kRp-----Sa~ELLkHPff~~~~~~   95 (547)
                      +|+     ++.++++||||+...+.
T Consensus       240 ~R~~~~~~~~~~ll~~~~~~~~~~~  264 (278)
T cd05606         240 RRLGCLGRGAQEVKEHPFFRSLDWQ  264 (278)
T ss_pred             hccCCCCCCHHHHHhCccccCCCch
Confidence            999     99999999999987654


No 143
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.19  E-value=3.2e-11  Score=123.87  Aligned_cols=91  Identities=26%  Similarity=0.438  Sum_probs=67.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--CC-----------------------CC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--KK-----------------------PE   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~~-----------------------P~   53 (547)
                      ||||++.  ..|+.++||||+||++|+|++|..||.+.. ....+..+...  ..                       +.
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGND-YIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQ  260 (343)
T ss_pred             cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccc
Confidence            6999987  468999999999999999999999998643 23333222211  00                       00


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                          ......++.+.+||.+||. +|.+|||+.++|.||||...
T Consensus       261 ~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         261 QDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             hhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence                0112356778999999999 69999999999999999864


No 144
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.19  E-value=2.9e-11  Score=119.83  Aligned_cols=88  Identities=27%  Similarity=0.443  Sum_probs=66.9

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-   72 (547)
                      ||||++.      ..|+.++||||+||++|+|++|..||........ +..+.....+. ..+...+..+++||.+||. 
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd06638         191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LFKIPRNPPPTLHQPELWSNEFNDFIRKCLTK  269 (286)
T ss_pred             cChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-HhhccccCCCcccCCCCcCHHHHHHHHHHccC
Confidence            6899874      3488899999999999999999999987543222 22232222221 1233457889999999999 


Q ss_pred             ccCCCCCHHHHhcCCcc
Q 008997           73 TVSSRLSARELLTDPFL   89 (547)
Q Consensus        73 dPskRpSa~ELLkHPff   89 (547)
                      +|.+||++.+++.|+||
T Consensus       270 ~p~~Rps~~ell~~~~~  286 (286)
T cd06638         270 DYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CcccCCCHHHHhhcccC
Confidence            69999999999999997


No 145
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.19  E-value=3.7e-11  Score=121.26  Aligned_cols=91  Identities=16%  Similarity=0.242  Sum_probs=69.5

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC---------------------CCcc--
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK---------------------PEAL--   55 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~---------------------P~~l--   55 (547)
                      +|||++.  ..++.++||||+|+++|+|++|.+||.+.+ ....+..+.....                     +...  
T Consensus       175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (309)
T cd07845         175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS-EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYN  253 (309)
T ss_pred             cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCC
Confidence            5899886  468899999999999999999999998754 4444444433110                     0000  


Q ss_pred             -----ccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           56 -----FKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        56 -----~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                           ....++.+++||.+||. +|.+||++.+++.||||+..
T Consensus       254 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         254 NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence                 11247889999999999 69999999999999999854


No 146
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.19  E-value=1.4e-11  Score=134.11  Aligned_cols=89  Identities=24%  Similarity=0.394  Sum_probs=77.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. +.|+..+|+||+||++|||.+|++||.... ..++.+.|...+.+  ++...+..++.|++.+|. +|.+|+
T Consensus       167 mAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-i~~Lv~~I~~d~v~--~p~~~S~~f~nfl~gLL~kdP~~Rl  243 (808)
T KOG0597|consen  167 MAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-ITQLVKSILKDPVK--PPSTASSSFVNFLQGLLIKDPAQRL  243 (808)
T ss_pred             cCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-HHHHHHHHhcCCCC--CcccccHHHHHHHHHHhhcChhhcc
Confidence            8999999 789999999999999999999999998743 56777777766543  344789999999999999 599999


Q ss_pred             CHHHHhcCCccccC
Q 008997           79 SARELLTDPFLQID   92 (547)
Q Consensus        79 Sa~ELLkHPff~~~   92 (547)
                      ++.+++.|||.+..
T Consensus       244 tW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  244 TWTDLLGHPFWKGK  257 (808)
T ss_pred             cHHHHhcChHHhhh
Confidence            99999999999864


No 147
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.19  E-value=3.5e-11  Score=121.25  Aligned_cols=94  Identities=32%  Similarity=0.504  Sum_probs=72.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|||++|..||.... ....+..+.....+. ......+..+++|+.+||. +|.+|
T Consensus       185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  263 (292)
T cd06658         185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP-PLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQR  263 (292)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHC
Confidence            6899887 678899999999999999999999998644 344444443322211 1122468899999999999 59999


Q ss_pred             CCHHHHhcCCccccCCCC
Q 008997           78 LSARELLTDPFLQIDDYD   95 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~~   95 (547)
                      |++.+++.||||+.....
T Consensus       264 pt~~~il~~~~~~~~~~~  281 (292)
T cd06658         264 ATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             cCHHHHhhChhhhccCCc
Confidence            999999999999976543


No 148
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.19  E-value=2.1e-11  Score=122.79  Aligned_cols=92  Identities=30%  Similarity=0.496  Sum_probs=67.8

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--------C-----------------
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--------P-----------------   52 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--------P-----------------   52 (547)
                      +|||++.   ..|+.++|+|||||++|+|++|..||...........++.....        +                 
T Consensus       175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (314)
T cd08216         175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPN  254 (314)
T ss_pred             cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccc
Confidence            5899986   35889999999999999999999999875433333333321100        0                 


Q ss_pred             ------CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           53 ------EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        53 ------~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                            ......++.++++|+.+||. +|.+||++.++|.||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         255 NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence                  00011234678899999999 69999999999999999865


No 149
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.19  E-value=4.4e-11  Score=118.03  Aligned_cols=89  Identities=26%  Similarity=0.406  Sum_probs=65.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC-CCC--------------------C----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG-KKP--------------------E----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg-~~P--------------------~----   53 (547)
                      +|||++.  ..++.++||||+|+++|+|++|.+||.+... ...+..+... ..+                    .    
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T cd07832         167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPI  245 (286)
T ss_pred             cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcc
Confidence            5899876  4578999999999999999999888876543 2333332221 000                    0    


Q ss_pred             ---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccc
Q 008997           54 ---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQ   90 (547)
Q Consensus        54 ---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~   90 (547)
                         ...+..+..+++||.+||. +|.+||++++++.||||.
T Consensus       246 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         246 PLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             hHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence               0112356889999999999 699999999999999983


No 150
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.19  E-value=4.4e-11  Score=123.37  Aligned_cols=91  Identities=22%  Similarity=0.416  Sum_probs=68.0

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC------------------------CCC-
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK------------------------KPE-   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~------------------------~P~-   53 (547)
                      +|||++.  ..++.++|||||||++|+|++|..||.+... ......+....                        .+. 
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (342)
T cd07854         185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHE-LEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRR  263 (342)
T ss_pred             cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCC
Confidence            5899875  4688899999999999999999999986542 22222222110                        000 


Q ss_pred             ---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         ...+.++.++++||.+||. +|.+||++.+++.||||+..
T Consensus       264 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         264 PLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             CHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence               0123467889999999999 69999999999999999864


No 151
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.19  E-value=4.8e-11  Score=120.38  Aligned_cols=95  Identities=24%  Similarity=0.352  Sum_probs=76.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc-ccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL-FKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l-~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.+.. ..+++..+..+..+... ....++++++||.+||. +|.+|
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  261 (305)
T cd05609         183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-PEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLER  261 (305)
T ss_pred             cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhc
Confidence            5899877 678999999999999999999999998754 56667766665432211 22468899999999999 69999


Q ss_pred             CC---HHHHhcCCccccCCCCc
Q 008997           78 LS---ARELLTDPFLQIDDYDS   96 (547)
Q Consensus        78 pS---a~ELLkHPff~~~~~~~   96 (547)
                      |+   +.+++.||||...++..
T Consensus       262 ~~~~~~~~ll~~~~~~~~~~~~  283 (305)
T cd05609         262 LGTGGAFEVKQHRFFLGLDWNG  283 (305)
T ss_pred             cCccCHHHHHhCccccCCCHHH
Confidence            97   79999999998766543


No 152
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.19  E-value=5.9e-11  Score=115.51  Aligned_cols=89  Identities=38%  Similarity=0.560  Sum_probs=69.1

Q ss_pred             CCccccc-cc---CCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc-cccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE-EE---YNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA-LFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~-~~---Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~-l~~~~S~elkdLI~kCL~-dP   74 (547)
                      +|||++. ..   ++.++||||||+++|+|++|..||.+......+...+..+..+.. ....+++.+++||.+||. +|
T Consensus       170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  249 (264)
T cd06626         170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDP  249 (264)
T ss_pred             cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCc
Confidence            5799887 33   788999999999999999999999875444444444444333221 122348899999999999 59


Q ss_pred             CCCCCHHHHhcCCcc
Q 008997           75 SSRLSARELLTDPFL   89 (547)
Q Consensus        75 skRpSa~ELLkHPff   89 (547)
                      .+||++.+++.|||+
T Consensus       250 ~~R~~~~~i~~~~~~  264 (264)
T cd06626         250 KKRPTASELLQHPFV  264 (264)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999996


No 153
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.18  E-value=3.4e-11  Score=127.06  Aligned_cols=94  Identities=21%  Similarity=0.299  Sum_probs=68.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch--HHHHHHHHhC--C------------------------C
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP--AQIYKKVISG--K------------------------K   51 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~--~qI~~kIlsg--~------------------------~   51 (547)
                      ||||++. ..|+.++|||||||++|||++|..||.+....  ...+..+...  .                        .
T Consensus       254 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (392)
T PHA03207        254 NSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLR  333 (392)
T ss_pred             cCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhccccc
Confidence            6899988 67999999999999999999999999764321  1111111110  0                        0


Q ss_pred             -CCccc-----cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCCC
Q 008997           52 -PEALF-----KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        52 -P~~l~-----~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~~   94 (547)
                       +...+     ..++.++++||.+||. +|.+||++.++|.||||....+
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        334 PPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             CCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence             00000     1246788999999999 6999999999999999987543


No 154
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.18  E-value=5.6e-11  Score=120.92  Aligned_cols=93  Identities=25%  Similarity=0.398  Sum_probs=73.4

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++.    ..++.++||||||+++|+|++|.+||.... .......+.....+......++..+++|+.+||. +|.
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~  262 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQ  262 (313)
T ss_pred             cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChh
Confidence            6899874    468889999999999999999999998754 3333344444444433344567889999999999 599


Q ss_pred             CCCCHHHHhcCCccccCCC
Q 008997           76 SRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~~~   94 (547)
                      +||++.+++.||||+....
T Consensus       263 ~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         263 ERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             hCcCHHHHhcCcccCCCch
Confidence            9999999999999997543


No 155
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.18  E-value=1e-11  Score=127.04  Aligned_cols=92  Identities=33%  Similarity=0.451  Sum_probs=75.5

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++.  ..|+.++||||+||++|+|++|..||.+. ...++++.+..+.... ....+++++++||.+||. +|.+|
T Consensus       163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-DTQQMYRNIAFGKVRF-PKNVLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-CHHHHHHHHHcCCCCC-CCccCCHHHHHHHHHHcCCCHHHC
Confidence            7999987  35899999999999999999999999874 3567777776665422 123468999999999999 69999


Q ss_pred             C----CHHHHhcCCccccCCC
Q 008997           78 L----SARELLTDPFLQIDDY   94 (547)
Q Consensus        78 p----Sa~ELLkHPff~~~~~   94 (547)
                      |    ++.+++.||||....+
T Consensus       241 ~~~~~~~~~ll~h~~~~~~~~  261 (330)
T cd05586         241 LGAHRDAVELKEHPFFADIDW  261 (330)
T ss_pred             CCCCCCHHHHhcCccccCCCH
Confidence            8    6999999999987654


No 156
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.18  E-value=3.6e-11  Score=118.54  Aligned_cols=92  Identities=33%  Similarity=0.494  Sum_probs=69.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++.  ..++.++|+||||+++|+|++|..||.+.. .......+.....+.......+.++.+|+.+||. +|.+|
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  246 (277)
T cd06917         168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-AFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKER  246 (277)
T ss_pred             eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC-hhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccC
Confidence            5899876  347889999999999999999999998744 3332222222222222222368899999999999 69999


Q ss_pred             CCHHHHhcCCccccCC
Q 008997           78 LSARELLTDPFLQIDD   93 (547)
Q Consensus        78 pSa~ELLkHPff~~~~   93 (547)
                      |++.+++.|+||+...
T Consensus       247 ~~~~~il~~~~~~~~~  262 (277)
T cd06917         247 LSAEELLKSKWIKAHS  262 (277)
T ss_pred             cCHHHHhhChHhhccc
Confidence            9999999999998754


No 157
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.18  E-value=1.2e-11  Score=125.77  Aligned_cols=92  Identities=24%  Similarity=0.442  Sum_probs=76.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++|||||||++|+|++|..||.+.. ...++..+......  .+..+++.+++||.+||. +|.+||
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~P~~R~  241 (318)
T cd05582         165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-RKETMTMILKAKLG--MPQFLSPEAQSLLRALFKRNPANRL  241 (318)
T ss_pred             cCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC-HHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHhHcC
Confidence            6899987 678999999999999999999999998754 55666666655432  345578999999999999 699999


Q ss_pred             C-----HHHHhcCCccccCCCC
Q 008997           79 S-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~   95 (547)
                      +     +.+++.||||....+.
T Consensus       242 ~a~~~~~~~~~~~~~~~~~~~~  263 (318)
T cd05582         242 GAGPDGVEEIKRHPFFSTIDWN  263 (318)
T ss_pred             CCCCCCHHHHhCCCCcCCCCHH
Confidence            9     6779999999876543


No 158
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.18  E-value=5.5e-11  Score=118.37  Aligned_cols=92  Identities=20%  Similarity=0.415  Sum_probs=70.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch----------HHHHHHHHhCCCCCccccCCCHHHHHHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP----------AQIYKKVISGKKPEALFKVEDPEVRQFIEK   69 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~----------~qI~~kIlsg~~P~~l~~~~S~elkdLI~k   69 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||......          ..+...+.....+......++..+.+|+.+
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  248 (284)
T cd06620         169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDA  248 (284)
T ss_pred             CCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHH
Confidence            5899887 67889999999999999999999999753321          123333333333322223367899999999


Q ss_pred             Hhc-ccCCCCCHHHHhcCCccccC
Q 008997           70 CLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        70 CL~-dPskRpSa~ELLkHPff~~~   92 (547)
                      ||. +|.+||++.++++|+||...
T Consensus       249 ~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         249 CLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HhcCCcccCcCHHHHhcCcccccc
Confidence            999 69999999999999999653


No 159
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.18  E-value=3.2e-11  Score=132.19  Aligned_cols=90  Identities=23%  Similarity=0.490  Sum_probs=77.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|||++|..||.+. +...++.++..+..+. ++..+++++++|+.+||. +|.+||
T Consensus       212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~L~~dP~~RP  289 (496)
T PTZ00283        212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-NMEEVMHKTLAGRYDP-LPPSISPEMQEIVTALLSSDPKRRP  289 (496)
T ss_pred             eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHcccChhhCc
Confidence            6899988 67999999999999999999999999874 3667777777766542 445679999999999999 699999


Q ss_pred             CHHHHhcCCccccC
Q 008997           79 SARELLTDPFLQID   92 (547)
Q Consensus        79 Sa~ELLkHPff~~~   92 (547)
                      ++.+++.|||++..
T Consensus       290 s~~ell~~p~~~~~  303 (496)
T PTZ00283        290 SSSKLLNMPICKLF  303 (496)
T ss_pred             CHHHHHhCHHHHHh
Confidence            99999999998753


No 160
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.18  E-value=2.6e-11  Score=123.97  Aligned_cols=92  Identities=25%  Similarity=0.419  Sum_probs=76.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++||||+||++|+|++|.+||.+.. ...++..+.....  ...+.+++.+++||.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  239 (325)
T cd05602         163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-TAEMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRL  239 (325)
T ss_pred             cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC-HHHHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            6999988 679999999999999999999999998744 5666776765543  2345679999999999999 599999


Q ss_pred             CHH----HHhcCCccccCCCC
Q 008997           79 SAR----ELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa~----ELLkHPff~~~~~~   95 (547)
                      ++.    ++++|+||...+|.
T Consensus       240 ~~~~~~~~i~~~~~~~~~~~~  260 (325)
T cd05602         240 GAKDDFMEIKNHIFFSPINWD  260 (325)
T ss_pred             CCCCCHHHHhcCcccCCCCHH
Confidence            865    89999999876654


No 161
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.17  E-value=6e-11  Score=113.22  Aligned_cols=87  Identities=32%  Similarity=0.520  Sum_probs=66.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcccc-CCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFK-VEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~-~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||........+ ..+.....+..... .++..+.+||.+||. +|++|
T Consensus       164 ~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  242 (253)
T cd05122         164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-FKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKR  242 (253)
T ss_pred             cCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhC
Confidence            5789877 56788999999999999999999999875422222 22332322222222 237899999999999 69999


Q ss_pred             CCHHHHhcCCc
Q 008997           78 LSARELLTDPF   88 (547)
Q Consensus        78 pSa~ELLkHPf   88 (547)
                      |++.+++.|||
T Consensus       243 ~t~~~~l~~~~  253 (253)
T cd05122         243 PTAEQLLKHPF  253 (253)
T ss_pred             CCHHHHhcCCC
Confidence            99999999998


No 162
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.17  E-value=2.1e-11  Score=124.61  Aligned_cols=91  Identities=24%  Similarity=0.371  Sum_probs=75.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.... ...++..+......  ..+..+..+.++|.+||. +|.+||
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~ll~~~p~~R~  239 (325)
T cd05604         163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-VAEMYDNILHKPLV--LRPGASLTAWSILEELLEKDRQRRL  239 (325)
T ss_pred             CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-HHHHHHHHHcCCcc--CCCCCCHHHHHHHHHHhccCHHhcC
Confidence            7999988 679999999999999999999999998743 66777777765432  234578899999999999 599998


Q ss_pred             CH----HHHhcCCccccCCC
Q 008997           79 SA----RELLTDPFLQIDDY   94 (547)
Q Consensus        79 Sa----~ELLkHPff~~~~~   94 (547)
                      ++    .+++.||||....+
T Consensus       240 ~~~~~~~~i~~h~~f~~~~~  259 (325)
T cd05604         240 GAKEDFLEIQEHPFFESLSW  259 (325)
T ss_pred             CCCCCHHHHhcCCCcCCCCH
Confidence            75    58999999987654


No 163
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.17  E-value=5.6e-11  Score=120.01  Aligned_cols=93  Identities=35%  Similarity=0.554  Sum_probs=72.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC-CccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP-EALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P-~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++|+.||.... .......+.....+ ...+..++..+.+||.+||. +|.+|
T Consensus       184 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~R  262 (297)
T cd06659         184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS-PVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQER  262 (297)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccC
Confidence            6899887 678999999999999999999999998644 34444444333221 12233568899999999999 69999


Q ss_pred             CCHHHHhcCCccccCCC
Q 008997           78 LSARELLTDPFLQIDDY   94 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~   94 (547)
                      |++.++++||||.....
T Consensus       263 ps~~~ll~~~~~~~~~~  279 (297)
T cd06659         263 ATAQELLDHPFLLQTGL  279 (297)
T ss_pred             cCHHHHhhChhhccCCC
Confidence            99999999999986543


No 164
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.17  E-value=2.2e-11  Score=124.46  Aligned_cols=92  Identities=27%  Similarity=0.436  Sum_probs=67.5

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-C------------------------
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-P------------------------   52 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P------------------------   52 (547)
                      ||||++.   ..|+.++||||+|+++|+|++|..||........+...+..... |                        
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (328)
T cd08226         175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGI  254 (328)
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhccc
Confidence            6899986   34789999999999999999999999875433333222211100 0                        


Q ss_pred             -------------------CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           53 -------------------EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        53 -------------------~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                                         .......++.+++||.+||. +|.+|||+.++++||||...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         255 GESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             ccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence                               00112246778999999999 79999999999999999753


No 165
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.17  E-value=7.7e-11  Score=115.84  Aligned_cols=88  Identities=28%  Similarity=0.456  Sum_probs=71.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcccCCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLATVSSRLS   79 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~dPskRpS   79 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||........+. .+.....+..++..+++.+++||.+||..|..||+
T Consensus       176 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~i~~~l~~~~~r~~  254 (264)
T cd06653         176 MSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF-KIATQPTKPMLPDGVSDACRDFLKQIFVEEKRRPT  254 (264)
T ss_pred             cCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH-HHHcCCCCCCCCcccCHHHHHHHHHHhcCcccCcc
Confidence            5899887 568889999999999999999999998754334333 34433333445667899999999999998999999


Q ss_pred             HHHHhcCCcc
Q 008997           80 ARELLTDPFL   89 (547)
Q Consensus        80 a~ELLkHPff   89 (547)
                      +.+++.|||.
T Consensus       255 ~~~~~~~~~~  264 (264)
T cd06653         255 AEFLLRHPFV  264 (264)
T ss_pred             HHHHhcCCCC
Confidence            9999999985


No 166
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.17  E-value=5.5e-11  Score=116.63  Aligned_cols=87  Identities=26%  Similarity=0.453  Sum_probs=64.7

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-CCcc--ccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-PEAL--FKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P~~l--~~~~S~elkdLI~kCL~-   72 (547)
                      ||||++.    ..++.++|+||+||++|+|++|..||........+. ....... +...  ...++..+++||.+||. 
T Consensus       173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06645         173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-LMTKSNFQPPKLKDKMKWSNSFHHFVKMALTK  251 (267)
T ss_pred             cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH-hhhccCCCCCcccccCCCCHHHHHHHHHHccC
Confidence            6899873    458889999999999999999999997644222222 2222222 1111  11357889999999999 


Q ss_pred             ccCCCCCHHHHhcCCc
Q 008997           73 TVSSRLSARELLTDPF   88 (547)
Q Consensus        73 dPskRpSa~ELLkHPf   88 (547)
                      +|.+||++.+++.|||
T Consensus       252 ~P~~R~~~~~ll~~~~  267 (267)
T cd06645         252 NPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CchhCcCHHHHhcCCC
Confidence            5999999999999998


No 167
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.17  E-value=5.5e-11  Score=116.90  Aligned_cols=89  Identities=24%  Similarity=0.419  Sum_probs=66.5

Q ss_pred             CCccccc-c-cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC--------------------------
Q 008997            1 MAPEVYE-E-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP--------------------------   52 (547)
Q Consensus         1 MAPEVL~-~-~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P--------------------------   52 (547)
                      +|||++. . .++.++|+||+|+++|+|++|+.||.+.....++...+.....+                          
T Consensus       165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd05118         165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMP  244 (283)
T ss_pred             cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccC
Confidence            5899877 3 68899999999999999999999998755433332221111000                          


Q ss_pred             -CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           53 -EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        53 -~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                       ....+.++.++++||.+||. +|.+||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         245 LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence             01123457899999999999 69999999999999997


No 168
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16  E-value=2.5e-11  Score=132.05  Aligned_cols=91  Identities=25%  Similarity=0.422  Sum_probs=65.6

Q ss_pred             CCccccc-c-----------cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCC-HHHHHHH
Q 008997            1 MAPEVYE-E-----------EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVED-PEVRQFI   67 (547)
Q Consensus         1 MAPEVL~-~-----------~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S-~elkdLI   67 (547)
                      |+||.+. -           ..+.++||||+|||+|+|+.|++||....+...-+..|......-.++...+ .++.+++
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~m  607 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVM  607 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHH
Confidence            8999876 1           1457899999999999999999999864332233333333211111222222 3499999


Q ss_pred             HHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           68 EKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        68 ~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                      +.||. +|.+|+++.+||+|||++.
T Consensus       608 K~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  608 KCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHhcCcccCCCcHHHhcCccccc
Confidence            99999 7999999999999999986


No 169
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.16  E-value=3.6e-11  Score=136.43  Aligned_cols=92  Identities=24%  Similarity=0.400  Sum_probs=76.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc-cccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA-LFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~-l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|||++|.+||.+.. ...++..++....+.. ....++..+.+++.+||. +|.+|
T Consensus       547 ~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~-~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R  625 (669)
T cd05610         547 LAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET-PQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKR  625 (669)
T ss_pred             cCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHC
Confidence            6999988 679999999999999999999999998754 6667777766544221 123467889999999999 69999


Q ss_pred             CCHHHHhcCCccccCC
Q 008997           78 LSARELLTDPFLQIDD   93 (547)
Q Consensus        78 pSa~ELLkHPff~~~~   93 (547)
                      |++.++|.||||...+
T Consensus       626 ~ta~e~l~h~~~~~~~  641 (669)
T cd05610         626 AGLKELKQHPLFHGVD  641 (669)
T ss_pred             cCHHHHHhCHhhcCCC
Confidence            9999999999998654


No 170
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.16  E-value=6e-11  Score=125.84  Aligned_cols=82  Identities=33%  Similarity=0.598  Sum_probs=69.1

Q ss_pred             CCcccccc---cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH-hCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYEE---EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI-SGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~~---~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl-sg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++.+   .|+.|+|||||||++|||+||+.||.+... .++...+. .+..| .++...++.+..||.+||. +|.
T Consensus       211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp-~~p~~~~~~l~~l~~~CW~~dp~  288 (362)
T KOG0192|consen  211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRP-PIPKECPPHLSSLMERCWLVDPS  288 (362)
T ss_pred             cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCC-CCCccCCHHHHHHHHHhCCCCCC
Confidence            89999994   599999999999999999999999999775 55555554 44444 3455589999999999999 699


Q ss_pred             CCCCHHHHh
Q 008997           76 SRLSARELL   84 (547)
Q Consensus        76 kRpSa~ELL   84 (547)
                      +||++.+++
T Consensus       289 ~RP~f~ei~  297 (362)
T KOG0192|consen  289 RRPSFLEIV  297 (362)
T ss_pred             cCCCHHHHH
Confidence            999999886


No 171
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.16  E-value=7.5e-11  Score=116.51  Aligned_cols=89  Identities=25%  Similarity=0.440  Sum_probs=66.3

Q ss_pred             CCccccc-c-cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CC-------------------CCC-----
Q 008997            1 MAPEVYE-E-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GK-------------------KPE-----   53 (547)
Q Consensus         1 MAPEVL~-~-~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~-------------------~P~-----   53 (547)
                      ||||++. . .++.++|+||||+++|+|++|.+||.+......+...... +.                   .+.     
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07833         168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE  247 (288)
T ss_pred             cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence            6899987 4 7889999999999999999999999875433332221110 00                   000     


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                          ..+..+++++++||++||. +|.+||++.++++||||
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                0122348889999999999 69999999999999998


No 172
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.16  E-value=8.2e-11  Score=113.15  Aligned_cols=87  Identities=25%  Similarity=0.503  Sum_probs=72.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||+|+++|+|++|..||.... ...+...+.....+ .++...+..+++++.+||. +|++||
T Consensus       170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp  247 (258)
T cd08215         170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-LLELALKILKGQYP-PIPSQYSSELRNLVSSLLQKDPEERP  247 (258)
T ss_pred             cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-HHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            5788876 668899999999999999999999998744 56666666655443 3344678999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++|.||||
T Consensus       248 ~~~~ll~~~~~  258 (258)
T cd08215         248 SIAQILQSPFI  258 (258)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997


No 173
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.16  E-value=5.5e-11  Score=115.59  Aligned_cols=87  Identities=29%  Similarity=0.501  Sum_probs=66.3

Q ss_pred             CCccccc-c---cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-c--cccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE-E---EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-A--LFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~-~---~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~--l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++. .   .++.++|+||||+++|+|++|.+||.+......+. .+.....+. .  ....++.++++|+.+||. 
T Consensus       168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  246 (262)
T cd06613         168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-LISKSNFPPPKLKDKEKWSPVFHDFIKKCLTK  246 (262)
T ss_pred             cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccCCCccccchhhhhHHHHHHHHHHcCC
Confidence            5899886 4   68889999999999999999999998755333333 333332111 1  122357789999999999 


Q ss_pred             ccCCCCCHHHHhcCCc
Q 008997           73 TVSSRLSARELLTDPF   88 (547)
Q Consensus        73 dPskRpSa~ELLkHPf   88 (547)
                      +|..||++.+++.|+|
T Consensus       247 ~p~~Rpt~~~il~~~~  262 (262)
T cd06613         247 DPKKRPTATKLLQHPF  262 (262)
T ss_pred             ChhhCCCHHHHhcCCC
Confidence            6999999999999998


No 174
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.16  E-value=7.9e-11  Score=114.02  Aligned_cols=88  Identities=36%  Similarity=0.492  Sum_probs=68.7

Q ss_pred             CCccccc-cc-CCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EE-YNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~-Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||.+. .. ++.++|+||||+++|+|++|..||.... .......+.........+..+++.+++|+.+||. +|.+|
T Consensus       168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  246 (258)
T cd06632         168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-GVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLR  246 (258)
T ss_pred             eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-HHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccC
Confidence            5788876 44 8899999999999999999999998754 3333333333222223445678999999999999 69999


Q ss_pred             CCHHHHhcCCcc
Q 008997           78 LSARELLTDPFL   89 (547)
Q Consensus        78 pSa~ELLkHPff   89 (547)
                      |++.+++.|||+
T Consensus       247 p~~~~~l~~~~~  258 (258)
T cd06632         247 PTAAELLEHPFV  258 (258)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999996


No 175
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.16  E-value=3.8e-11  Score=122.38  Aligned_cols=92  Identities=24%  Similarity=0.347  Sum_probs=75.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ..+++..+.....  ..+...+..+.++|.+||. +|.+|+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  239 (321)
T cd05603         163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-VSQMYDNILHKPL--QLPGGKTVAACDLLVGLLHKDQRRRL  239 (321)
T ss_pred             CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-HHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHccCCHhhcC
Confidence            6899988 679999999999999999999999998743 5667777766543  3345578899999999999 599998


Q ss_pred             CH----HHHhcCCccccCCCC
Q 008997           79 SA----RELLTDPFLQIDDYD   95 (547)
Q Consensus        79 Sa----~ELLkHPff~~~~~~   95 (547)
                      ++    .+++.|+||...++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~  260 (321)
T cd05603         240 GAKADFLEIKNHVFFSPINWD  260 (321)
T ss_pred             CCCCCHHHHhCCCCcCCCCHH
Confidence            75    599999999876543


No 176
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.15  E-value=7.5e-11  Score=117.76  Aligned_cols=93  Identities=24%  Similarity=0.492  Sum_probs=70.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC----chHHHHHHHHhCCCCC---ccc--cCCCHHHHHHHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT----HPAQIYKKVISGKKPE---ALF--KVEDPEVRQFIEKC   70 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s----~~~qI~~kIlsg~~P~---~l~--~~~S~elkdLI~kC   70 (547)
                      +|||++. ..|+.++|+||+|+++|+|++|..||....    ...++...+.....+.   ...  ...++.+++||.+|
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  249 (287)
T cd06621         170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQC  249 (287)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHH
Confidence            5899887 678999999999999999999999998641    2334444444322211   111  12467899999999


Q ss_pred             hc-ccCCCCCHHHHhcCCccccCC
Q 008997           71 LA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        71 L~-dPskRpSa~ELLkHPff~~~~   93 (547)
                      |. +|.+||++.+++.||||+...
T Consensus       250 l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         250 LEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             cCCCcccCCCHHHHHhCccccccc
Confidence            99 699999999999999997543


No 177
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.15  E-value=8.5e-11  Score=119.14  Aligned_cols=93  Identities=23%  Similarity=0.368  Sum_probs=73.0

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++.    +.++.++||||||+++|+|++|..||.... .......+..+..+.......+..+++||.+||. +|.
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~  256 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQ  256 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-HHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcc
Confidence            5899874    457889999999999999999999997644 3333334444444443344578899999999999 599


Q ss_pred             CCCCHHHHhcCCccccCCC
Q 008997           76 SRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~~~   94 (547)
                      +||++.+++.|||+.....
T Consensus       257 ~Rp~~~~ll~~~~~~~~~~  275 (308)
T cd06634         257 DRPTSEVLLKHRFVLRERP  275 (308)
T ss_pred             cCCCHHHHhhCccccccCC
Confidence            9999999999999987543


No 178
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.15  E-value=5.2e-11  Score=118.88  Aligned_cols=93  Identities=25%  Similarity=0.353  Sum_probs=68.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCCCC------------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKKPE------------------------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~P~------------------------   53 (547)
                      ||||++.  ..++.++||||+|+++|+|++|.+||........+.+.+.. +....                        
T Consensus       170 ~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (294)
T PLN00009        170 RAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDL  249 (294)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCH
Confidence            5899876  35788999999999999999999999875433333322110 00000                        


Q ss_pred             -ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 -ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 -~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                       ...+..++.+++|+.+||. +|.+||++.+++.||||...+
T Consensus       250 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        250 ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence             0123467889999999999 699999999999999998643


No 179
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.15  E-value=6.7e-11  Score=116.56  Aligned_cols=88  Identities=25%  Similarity=0.333  Sum_probs=66.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC-C-----------------C-------Cc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK-K-----------------P-------EA   54 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~-~-----------------P-------~~   54 (547)
                      +|||++. ..++.++|+||||+++|+|++|.+||.+.. ....+.++.... .                 +       ..
T Consensus       173 ~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T cd07838         173 RAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS-EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKS  251 (287)
T ss_pred             cChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC-hHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhh
Confidence            5899887 678899999999999999999999998754 333333333210 0                 0       00


Q ss_pred             cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           55 LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        55 l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      ..+.+++.+.+||.+||. +|.+||++.+++.||||
T Consensus       252 ~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         252 FVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            012346788999999999 69999999999999997


No 180
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.15  E-value=5.9e-11  Score=124.75  Aligned_cols=94  Identities=22%  Similarity=0.380  Sum_probs=73.2

Q ss_pred             CCcccccc-----cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc--cCCCHHHHHHHHHHhcc
Q 008997            1 MAPEVYEE-----EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF--KVEDPEVRQFIEKCLAT   73 (547)
Q Consensus         1 MAPEVL~~-----~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~--~~~S~elkdLI~kCL~d   73 (547)
                      ||||++..     .|+.++||||+||++|+|++|..||.+.. ....+..+........++  ..++..+++|+.+||.+
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~  288 (370)
T cd05621         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-LVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTD  288 (370)
T ss_pred             CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccC
Confidence            79999862     37889999999999999999999998754 556667776543322222  24689999999999985


Q ss_pred             -c--CCCCCHHHHhcCCccccCCCC
Q 008997           74 -V--SSRLSARELLTDPFLQIDDYD   95 (547)
Q Consensus        74 -P--skRpSa~ELLkHPff~~~~~~   95 (547)
                       +  ..|+++.++++||||+...+.
T Consensus       289 ~~~r~~R~~~~e~l~hp~~~~~~~~  313 (370)
T cd05621         289 REVRLGRNGVEEIKQHPFFKNDQWN  313 (370)
T ss_pred             chhccCCCCHHHHhcCcccCCCCcC
Confidence             4  348999999999999876543


No 181
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.15  E-value=5e-11  Score=118.22  Aligned_cols=92  Identities=28%  Similarity=0.465  Sum_probs=72.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... +......+..+.. .......+..+.+|+.+||. +|.+||
T Consensus       168 ~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (277)
T cd06640         168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH-PMRVLFLIPKNNP-PTLTGEFSKPFKEFIDACLNKDPSFRP  245 (277)
T ss_pred             cCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC-hHhHhhhhhcCCC-CCCchhhhHHHHHHHHHHcccCcccCc
Confidence            5899887 568899999999999999999999998744 4444433333322 23444568889999999999 599999


Q ss_pred             CHHHHhcCCccccCCC
Q 008997           79 SARELLTDPFLQIDDY   94 (547)
Q Consensus        79 Sa~ELLkHPff~~~~~   94 (547)
                      ++.++++|+||.....
T Consensus       246 ~~~~il~~~~~~~~~~  261 (277)
T cd06640         246 TAKELLKHKFIVKNAK  261 (277)
T ss_pred             CHHHHHhChHhhhcch
Confidence            9999999999986543


No 182
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.15  E-value=6.4e-11  Score=124.39  Aligned_cols=93  Identities=23%  Similarity=0.330  Sum_probs=73.7

Q ss_pred             CCcccccc-----cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC--CccccCCCHHHHHHHHHHhcc
Q 008997            1 MAPEVYEE-----EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP--EALFKVEDPEVRQFIEKCLAT   73 (547)
Q Consensus         1 MAPEVL~~-----~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P--~~l~~~~S~elkdLI~kCL~d   73 (547)
                      ||||++..     .|+.++|||||||++|+|++|..||.+.. ....+..+......  ......++..+++||.+||.+
T Consensus       210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~  288 (371)
T cd05622         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTD  288 (371)
T ss_pred             cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCC
Confidence            79999862     38899999999999999999999998743 56677777765432  222345799999999999985


Q ss_pred             -cC--CCCCHHHHhcCCccccCCC
Q 008997           74 -VS--SRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        74 -Ps--kRpSa~ELLkHPff~~~~~   94 (547)
                       +.  .|+++.++++|+||+...+
T Consensus       289 ~~~r~~r~~~~ei~~h~~~~~~~~  312 (371)
T cd05622         289 REVRLGRNGVEEIKRHLFFKNDQW  312 (371)
T ss_pred             hhhhcCCCCHHHHhcCcccCCCCh
Confidence             33  3789999999999987654


No 183
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.15  E-value=8.5e-11  Score=117.34  Aligned_cols=88  Identities=23%  Similarity=0.324  Sum_probs=63.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCCCCcc---------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKKPEAL---------------------   55 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~P~~l---------------------   55 (547)
                      ||||++.  ..++.++||||||+++|+|++|.+||.+.. .......+..  +..+...                     
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT-EQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKR  268 (310)
T ss_pred             cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccch
Confidence            6899876  347889999999999999999999998644 2222221111  1111000                     


Q ss_pred             -------ccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           56 -------FKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        56 -------~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                             ....++.+++||.+||. +|.+||+++++++||||
T Consensus       269 ~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         269 KVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                   11235678899999999 69999999999999998


No 184
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.15  E-value=6.8e-11  Score=123.12  Aligned_cols=91  Identities=25%  Similarity=0.394  Sum_probs=62.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCC-CCCCch---------HHHHHHHHh-CCCCCccc------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPY-SECTHP---------AQIYKKVIS-GKKPEALF------------   56 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF-~g~s~~---------~qI~~kIls-g~~P~~l~------------   56 (547)
                      ||||++. ..|+.++|||||||++|||+++..|+ ......         ..+...+.. +..|..++            
T Consensus       223 ~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (357)
T PHA03209        223 NAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFI  302 (357)
T ss_pred             cCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHH
Confidence            6999988 67999999999999999999865444 321110         111111111 11111100            


Q ss_pred             ------------------cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           57 ------------------KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        57 ------------------~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                                        ..++..+.+||.+||. +|.+|||+.++|+||||+.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        303 EYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             hhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                              1346677889999999 6999999999999999974


No 185
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.15  E-value=8.3e-11  Score=115.70  Aligned_cols=88  Identities=34%  Similarity=0.564  Sum_probs=66.8

Q ss_pred             CCccccc-c--cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC----CCCccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE-E--EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK----KPEALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~-~--~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~----~P~~l~~~~S~elkdLI~kCL~-   72 (547)
                      +|||++. .  .++.++|+||||+++|+|++|..||........+. .+....    .+......++..+++||.+||. 
T Consensus       177 ~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  255 (272)
T cd06629         177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMF-KLGNKRSAPPIPPDVSMNLSPVALDFLNACFTI  255 (272)
T ss_pred             cCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHH-HhhccccCCcCCccccccCCHHHHHHHHHHhcC
Confidence            5799876 3  47889999999999999999999997544322222 222221    1222334568899999999999 


Q ss_pred             ccCCCCCHHHHhcCCcc
Q 008997           73 TVSSRLSARELLTDPFL   89 (547)
Q Consensus        73 dPskRpSa~ELLkHPff   89 (547)
                      +|.+||++.++++||||
T Consensus       256 ~p~~Rps~~~il~~~~~  272 (272)
T cd06629         256 NPDNRPTARELLQHPFI  272 (272)
T ss_pred             ChhhCCCHHHHhhCCCC
Confidence            69999999999999997


No 186
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14  E-value=4.3e-11  Score=130.86  Aligned_cols=97  Identities=23%  Similarity=0.381  Sum_probs=81.6

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cC
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VS   75 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-Ps   75 (547)
                      |||||+.    +.|+.++||||+||+..||.-.++|+...+ ....+.-|.....|......++..++.||..||++ |.
T Consensus       189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-AMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipq  267 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQ  267 (948)
T ss_pred             cchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-HHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcc
Confidence            8999986    789999999999999999999999998754 55444456666666655566899999999999997 99


Q ss_pred             CCCCHHHHhcCCccccCCCCchh
Q 008997           76 SRLSARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~~~~~~l   98 (547)
                      .|||.+++|+|+|+....+...+
T Consensus       268 eRptse~ll~H~fv~R~Rp~tvi  290 (948)
T KOG0577|consen  268 ERPTSEELLKHRFVLRERPPTVI  290 (948)
T ss_pred             cCCcHHHHhhcchhccCCCchHH
Confidence            99999999999999877665444


No 187
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14  E-value=4.5e-11  Score=123.54  Aligned_cols=95  Identities=22%  Similarity=0.470  Sum_probs=82.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +||||+. ..|+..+|+|.+||++|||.||+.||.... -..++..|+.+...  ++..++++++.|+..+|. +|.+|+
T Consensus       335 LAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d-h~kLFeLIl~ed~k--FPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD-HEKLFELILMEDLK--FPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             cCchhhccccccceeehhhhhHHHHHHHhccCcccccc-hhHHHHHHHhhhcc--CCccCCHHHHHHHHHHhhcChHhhc
Confidence            5899998 789999999999999999999999998754 46677777766553  456789999999999999 599998


Q ss_pred             C-----HHHHhcCCccccCCCCchh
Q 008997           79 S-----ARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~~~l   98 (547)
                      .     +.|+..|+||...+|...+
T Consensus       412 GgGpdDakEi~~h~FF~~v~W~~~~  436 (516)
T KOG0690|consen  412 GGGPDDAKEIMRHRFFASVDWEATY  436 (516)
T ss_pred             CCCchhHHHHHhhhhhccCCHHHHH
Confidence            5     8999999999999987554


No 188
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.14  E-value=7.6e-11  Score=119.49  Aligned_cols=91  Identities=25%  Similarity=0.473  Sum_probs=67.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHH---------------------------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKV---------------------------------   46 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kI---------------------------------   46 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... .......+                                 
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (308)
T cd06615         165 MSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD-AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELL  243 (308)
T ss_pred             cChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc-hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHH
Confidence            5899887 568899999999999999999999997532 22222111                                 


Q ss_pred             ---HhCCCCCccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           47 ---ISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        47 ---lsg~~P~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         .....|......+++++++|+.+||. +|++||++.++++||||...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         244 DYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             HHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence               11111111122367889999999999 69999999999999999764


No 189
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.14  E-value=6.4e-11  Score=117.45  Aligned_cols=93  Identities=25%  Similarity=0.411  Sum_probs=71.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++. ..++.++|+||+|+++|+|++|+.||.....   ...+...+..  .+...+...++.+++||.+||. +|.
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~  238 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEALLQKDPE  238 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHHHccCChh
Confidence            5899887 5688999999999999999999999976432   1222222221  1223445679999999999999 699


Q ss_pred             CCC-----CHHHHhcCCccccCCCC
Q 008997           76 SRL-----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        76 kRp-----Sa~ELLkHPff~~~~~~   95 (547)
                      +||     ++.+++.||||...++.
T Consensus       239 ~R~~~~~~~~~~ll~h~~~~~~~~~  263 (277)
T cd05577         239 KRLGCRGGSADEVREHPLFKDLNWR  263 (277)
T ss_pred             HccCCCcccHHHHHhChhhhcCChh
Confidence            999     88889999999876553


No 190
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.14  E-value=9.6e-11  Score=114.47  Aligned_cols=87  Identities=25%  Similarity=0.473  Sum_probs=70.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||.+. ..++.++|+||||+++|+|++|..||.... ...+...+..+..+. .+..++.++.+||.+||. +|.+||
T Consensus       172 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp  249 (260)
T cd08222         172 MSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-FLSVVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRP  249 (260)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCc
Confidence            4788876 568889999999999999999999997643 445555555554433 345678899999999999 599999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++||||
T Consensus       250 ~~~~il~~~~~  260 (260)
T cd08222         250 SAAEILRNPFI  260 (260)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997


No 191
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.14  E-value=9.5e-11  Score=117.06  Aligned_cols=88  Identities=23%  Similarity=0.312  Sum_probs=64.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--CC-C----------------------C
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--KK-P----------------------E   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~~-P----------------------~   53 (547)
                      +|||++.  ..++.++||||||+++|+|++|++||.+.. .......+...  .. +                      .
T Consensus       193 ~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (311)
T cd07866         193 RPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS-DIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPR  271 (311)
T ss_pred             CChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCc
Confidence            5899876  458899999999999999999999998754 33333332211  00 0                      0


Q ss_pred             c---cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 A---LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ~---l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      .   ......+.+.+||.+||. +|.+||++.+++.||||
T Consensus       272 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         272 TLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             cHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            0   012245678899999999 69999999999999998


No 192
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.14  E-value=8.2e-11  Score=121.35  Aligned_cols=92  Identities=30%  Similarity=0.445  Sum_probs=69.2

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC-C---------------------CC---
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK-K---------------------PE---   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~-~---------------------P~---   53 (547)
                      ||||++.  ..++.++|+|||||++|+|++|+.||.+.. ....+..+.... .                     +.   
T Consensus       181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (342)
T cd07879         181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-YLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR  259 (342)
T ss_pred             cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCccc
Confidence            6899986  358899999999999999999999998754 333333332210 0                     00   


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                          ..++..++.+++||.+||. +|.+||++.+++.||||....
T Consensus       260 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         260 KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence                0113457889999999999 699999999999999998754


No 193
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.14  E-value=1e-10  Score=116.96  Aligned_cols=92  Identities=27%  Similarity=0.520  Sum_probs=75.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||.+. ..++.++|+||||+++|+|++|..||.... .....+.+..+..+  ++...++.++++|.+||. +|.+|+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~R~  241 (290)
T cd05580         165 LAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-PIQIYEKILEGKVR--FPSFFSPDAKDLIRNLLQVDLTKRL  241 (290)
T ss_pred             cChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCcc--CCccCCHHHHHHHHHHccCCHHHcc
Confidence            5899887 667889999999999999999999998744 55566666655432  344568999999999999 599999


Q ss_pred             -----CHHHHhcCCccccCCCC
Q 008997           79 -----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        79 -----Sa~ELLkHPff~~~~~~   95 (547)
                           ++++++.||||+...|.
T Consensus       242 ~~~~~~~~~l~~~~~~~~~~~~  263 (290)
T cd05580         242 GNLKNGVNDIKNHPWFAGIDWI  263 (290)
T ss_pred             CcccCCHHHHHcCcccccCCHH
Confidence                 89999999999876653


No 194
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.14  E-value=7.4e-11  Score=121.17  Aligned_cols=94  Identities=19%  Similarity=0.414  Sum_probs=73.5

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc---cccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA---LFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~---l~~~~S~elkdLI~kCL   71 (547)
                      ||||++.      ..|+.++|||||||++|||++|+.||.+.. ..+.+.++........   ....+++++++||.+||
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll  248 (332)
T cd05623         170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLI  248 (332)
T ss_pred             cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHc
Confidence            6999975      358899999999999999999999998754 5666777765432111   12356899999999999


Q ss_pred             cc---cCCCCCHHHHhcCCccccCCCC
Q 008997           72 AT---VSSRLSARELLTDPFLQIDDYD   95 (547)
Q Consensus        72 ~d---PskRpSa~ELLkHPff~~~~~~   95 (547)
                      ..   +..|+++.++++||||...++.
T Consensus       249 ~~~~~r~~r~~~~~~~~h~~f~~~~~~  275 (332)
T cd05623         249 CSREHRLGQNGIEDFKQHPFFTGIDWD  275 (332)
T ss_pred             cChhhhcCCCCHHHHhCCCCcCCCCHH
Confidence            73   3447899999999999976653


No 195
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.14  E-value=9.9e-11  Score=115.74  Aligned_cols=88  Identities=27%  Similarity=0.411  Sum_probs=65.0

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CC-------------------CCC----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GK-------------------KPE----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~-------------------~P~----   53 (547)
                      +|||++.  ..++.++||||||+++|+|++|.+||.+..... ....+..  +.                   .+.    
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (286)
T cd07846         167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEI  245 (286)
T ss_pred             cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchHhhccccccccCc
Confidence            5899876  457889999999999999999999997644322 2222211  00                   000    


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                          ..++.++..+++|+.+||. +|.+||++.+++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         246 EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                0123457889999999999 69999999999999998


No 196
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.14  E-value=7.5e-11  Score=115.09  Aligned_cols=87  Identities=28%  Similarity=0.353  Sum_probs=69.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc--hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH--PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~--~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      +|||++. ..++.++|+||+|+++|+|++|..||.....  ...+......  .....+...+..+.++|.+||. +|.+
T Consensus       166 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~  243 (258)
T cd05578         166 MAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQK  243 (258)
T ss_pred             cCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhH
Confidence            5899887 5689999999999999999999999987543  2333333222  2223345578999999999999 6999


Q ss_pred             CCCH--HHHhcCCcc
Q 008997           77 RLSA--RELLTDPFL   89 (547)
Q Consensus        77 RpSa--~ELLkHPff   89 (547)
                      ||++  .+++.||||
T Consensus       244 R~~~~~~~l~~~~~~  258 (258)
T cd05578         244 RLGDNLKDLKNHPYF  258 (258)
T ss_pred             cCCccHHHHhcCCCC
Confidence            9999  999999998


No 197
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.13  E-value=1.2e-10  Score=116.12  Aligned_cols=88  Identities=19%  Similarity=0.324  Sum_probs=65.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC---------------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK---------------------------   51 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~---------------------------   51 (547)
                      ||||++.  ..++.++|+||+|+++|+|++|.+||.+... ...+.++.....                           
T Consensus       173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (293)
T cd07843         173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-IDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYN  251 (293)
T ss_pred             cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhhccchhcccccccccch
Confidence            6899886  3468899999999999999999999987543 333333221100                           


Q ss_pred             --CCccccC-CCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           52 --PEALFKV-EDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        52 --P~~l~~~-~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                        ...++.. +++.+++||.+||. +|++||++.|++.||||
T Consensus       252 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         252 QLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence              0011112 48889999999999 69999999999999998


No 198
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.13  E-value=9.9e-11  Score=115.65  Aligned_cols=88  Identities=26%  Similarity=0.401  Sum_probs=65.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC--------------------CCC-----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK--------------------KPE-----   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~--------------------~P~-----   53 (547)
                      |+||++.  ..++.++|+||||+++|+|++|..||.+... ...+.++....                    .+.     
T Consensus       167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (284)
T cd07836         167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN-EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD  245 (284)
T ss_pred             cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHH
Confidence            5899876  3578899999999999999999999987553 33333322110                    000     


Q ss_pred             --ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 --ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 --~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                        ...+..++.+++++.+||. +|.+||++.+++.||||
T Consensus       246 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         246 LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence              0112357889999999999 69999999999999998


No 199
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.13  E-value=8.1e-11  Score=124.99  Aligned_cols=92  Identities=30%  Similarity=0.351  Sum_probs=65.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc------hHHHHHHHHh--CCC--------------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH------PAQIYKKVIS--GKK--------------------   51 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~------~~qI~~kIls--g~~--------------------   51 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+...      ....+..+..  +..                    
T Consensus       250 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~  329 (391)
T PHA03212        250 NAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLA  329 (391)
T ss_pred             CChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHH
Confidence            6899987 6799999999999999999999988754211      0111111110  100                    


Q ss_pred             ------CCc--cc---cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           52 ------PEA--LF---KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        52 ------P~~--l~---~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                            +..  .+   ..++.++++||.+||. +|.+|||+.++|+||||+..
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        330 KKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             hccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence                  000  01   1235688999999999 69999999999999999864


No 200
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.13  E-value=9.9e-11  Score=120.78  Aligned_cols=92  Identities=27%  Similarity=0.437  Sum_probs=69.4

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-CC------------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-PE------------------------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P~------------------------   53 (547)
                      +|||++.  ..++.++||||+||++|+|++|+.||.+.. ....+..+..... +.                        
T Consensus       182 ~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (343)
T cd07851         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSD-HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPK  260 (343)
T ss_pred             cCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCC
Confidence            5899876  357889999999999999999999998754 3333443332110 00                        


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                          ..+...++.+.+||.+||. +|.+||++.+|+.||||+...
T Consensus       261 ~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~  305 (343)
T cd07851         261 KDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH  305 (343)
T ss_pred             CCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccC
Confidence                0112358899999999999 699999999999999998653


No 201
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.13  E-value=1.4e-10  Score=115.23  Aligned_cols=91  Identities=33%  Similarity=0.564  Sum_probs=70.3

Q ss_pred             CCccccc-------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHH---HHHHhCCCCCccccCCCHHHHHHHHHH
Q 008997            1 MAPEVYE-------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIY---KKVISGKKPEALFKVEDPEVRQFIEKC   70 (547)
Q Consensus         1 MAPEVL~-------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~---~kIlsg~~P~~l~~~~S~elkdLI~kC   70 (547)
                      +|||++.       ..++.++|+|||||++|+|++|..||.... ....+   ..+..+..+ ..+..+++++++||.+|
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~  245 (286)
T cd06622         168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET-YANIFAQLSAIVDGDPP-TLPSGYSDDAQDFVAKC  245 (286)
T ss_pred             cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc-hhhHHHHHHHHhhcCCC-CCCcccCHHHHHHHHHH
Confidence            5899875       236789999999999999999999997533 22332   233334333 34455799999999999


Q ss_pred             hc-ccCCCCCHHHHhcCCccccCC
Q 008997           71 LA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        71 L~-dPskRpSa~ELLkHPff~~~~   93 (547)
                      |. +|.+||++.+++.||||....
T Consensus       246 l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         246 LNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             cccCcccCCCHHHHhcChhhhhcc
Confidence            99 699999999999999997653


No 202
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.13  E-value=8.7e-11  Score=117.57  Aligned_cols=93  Identities=24%  Similarity=0.394  Sum_probs=72.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchH---HHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPA---QIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~---qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++. ..|+.++|+||+|+++|+|++|..||.+.....   .+...+....  ...+..+++++.+|+.+||. +|.
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~  245 (285)
T cd05632         168 MAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE--EVYSAKFSEEAKSICKMLLTKDPK  245 (285)
T ss_pred             cChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc--cccCccCCHHHHHHHHHHccCCHh
Confidence            6899987 679999999999999999999999998744221   2222222222  12344578899999999999 699


Q ss_pred             CCCC-----HHHHhcCCccccCCCC
Q 008997           76 SRLS-----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        76 kRpS-----a~ELLkHPff~~~~~~   95 (547)
                      +||+     +.+++.|+||+...+.
T Consensus       246 ~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05632         246 QRLGCQEEGAGEVKRHPFFRNMNFK  270 (285)
T ss_pred             HcCCCcccChHHHHcChhhhcCCHH
Confidence            9999     8899999999987543


No 203
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.13  E-value=7.4e-11  Score=128.30  Aligned_cols=89  Identities=24%  Similarity=0.494  Sum_probs=76.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|+|++|..||.+.. ...++..+..+..+. .+..+++++++||.+||. +|.+||
T Consensus       238 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-~~~~~~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~Rp  315 (478)
T PTZ00267        238 LAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-QREIMQQVLYGKYDP-FPCPVSSGMKALLDPLLSKNPALRP  315 (478)
T ss_pred             cCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCC-CCccCCHHHHHHHHHHhccChhhCc
Confidence            6999987 679999999999999999999999998744 566777777765532 344578999999999999 699999


Q ss_pred             CHHHHhcCCcccc
Q 008997           79 SARELLTDPFLQI   91 (547)
Q Consensus        79 Sa~ELLkHPff~~   91 (547)
                      ++.+++.|+|++.
T Consensus       316 s~~~~l~~~~~~~  328 (478)
T PTZ00267        316 TTQQLLHTEFLKY  328 (478)
T ss_pred             CHHHHHhCHHHHH
Confidence            9999999999974


No 204
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.13  E-value=1.6e-10  Score=112.50  Aligned_cols=87  Identities=25%  Similarity=0.500  Sum_probs=72.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||... ....+...+..+..+. ....++.++++|+.+||. +|.+||
T Consensus       168 ~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R~  245 (256)
T cd08221         168 MSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-NPLNLVVKIVQGNYTP-VVSVYSSELISLVHSLLQQDPEKRP  245 (256)
T ss_pred             cCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCC-CccccCHHHHHHHHHHcccCcccCC
Confidence            4789877 56788999999999999999999999874 3566666677665543 235578999999999999 599999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++|+|+
T Consensus       246 s~~~ll~~~~l  256 (256)
T cd08221         246 TADEVLDQPLL  256 (256)
T ss_pred             CHHHHhhCcCC
Confidence            99999999986


No 205
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.13  E-value=1.3e-10  Score=119.16  Aligned_cols=92  Identities=24%  Similarity=0.429  Sum_probs=67.1

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh---C---------------------CC-CC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS---G---------------------KK-PE   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls---g---------------------~~-P~   53 (547)
                      ||||++.  ..++.++||||+|+++|+|++|++||.+... ......+..   .                     .. +.
T Consensus       176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPK  254 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCc
Confidence            6899875  4688999999999999999999999976432 111111110   0                     00 00


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                          ...+..++++++||.+||. +|.+||++.+++.||||....
T Consensus       255 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         255 VPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             ccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence                0112357889999999999 699999999999999998653


No 206
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.12  E-value=1e-11  Score=127.12  Aligned_cols=97  Identities=28%  Similarity=0.381  Sum_probs=75.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhcc-cCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLAT-VSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~d-PskR   77 (547)
                      |||||+. -+|+.++||||+|++..||..|++||.... +......|-..++|. .-+..++.++-+||++||.+ |.+|
T Consensus       196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH-PMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R  274 (502)
T KOG0574|consen  196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH-PMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEER  274 (502)
T ss_pred             ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc-ccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHH
Confidence            8999998 689999999999999999999999998754 332222222222221 11334688999999999995 9999


Q ss_pred             CCHHHHhcCCccccCCCCchh
Q 008997           78 LSARELLTDPFLQIDDYDSDL   98 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~~~~l   98 (547)
                      .+|.+|++|||++.......+
T Consensus       275 ~TA~~L~~H~FiknA~g~~I~  295 (502)
T KOG0574|consen  275 KTALRLCEHTFIKNAPGCDIM  295 (502)
T ss_pred             HHHHHHhhhhhhcCCCcccHH
Confidence            999999999999987655444


No 207
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.12  E-value=1.5e-10  Score=116.77  Aligned_cols=93  Identities=31%  Similarity=0.519  Sum_probs=71.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||+|+++|+|++|..||.+.. .......+.....+. .....+++.+.+|+.+||. +|.+|
T Consensus       183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R  261 (292)
T cd06657         183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQR  261 (292)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccC
Confidence            5889876 568889999999999999999999998643 333333333222211 1223468899999999999 59999


Q ss_pred             CCHHHHhcCCccccCCC
Q 008997           78 LSARELLTDPFLQIDDY   94 (547)
Q Consensus        78 pSa~ELLkHPff~~~~~   94 (547)
                      |++.+++.||||.....
T Consensus       262 ~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         262 ATAAELLKHPFLAKAGP  278 (292)
T ss_pred             cCHHHHhcChHHhccCC
Confidence            99999999999987654


No 208
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.12  E-value=6.7e-11  Score=117.09  Aligned_cols=91  Identities=29%  Similarity=0.464  Sum_probs=71.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... .......+..+..+ ......+..+.+||.+||. +|.+||
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp  245 (277)
T cd06642         168 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH-PMRVLFLIPKNSPP-TLEGQYSKPFKEFVEACLNKDPRFRP  245 (277)
T ss_pred             cCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccc-hhhHHhhhhcCCCC-CCCcccCHHHHHHHHHHccCCcccCc
Confidence            5899887 678889999999999999999999997643 33333333333322 2334567889999999999 699999


Q ss_pred             CHHHHhcCCccccCC
Q 008997           79 SARELLTDPFLQIDD   93 (547)
Q Consensus        79 Sa~ELLkHPff~~~~   93 (547)
                      ++.++++||||....
T Consensus       246 ~~~~il~~~~~~~~~  260 (277)
T cd06642         246 TAKELLKHKFITRYT  260 (277)
T ss_pred             CHHHHHHhHHHHHHh
Confidence            999999999997643


No 209
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.12  E-value=1.6e-10  Score=118.18  Aligned_cols=92  Identities=21%  Similarity=0.329  Sum_probs=68.5

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC--C-CC----------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK--K-PE----------------------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~--~-P~----------------------   53 (547)
                      +|||++.  ..++.++|+||+|+++|+|++|.+||.+... ...+..+....  . +.                      
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE-IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL  278 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccH
Confidence            5899886  3578899999999999999999999987543 33333332210  0 00                      


Q ss_pred             -ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 -ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 -~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                       ......+..+++||.+||. +|++||++.+++.||||+...
T Consensus       279 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        279 KTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence             0012347789999999999 699999999999999998654


No 210
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.12  E-value=1.7e-10  Score=117.44  Aligned_cols=93  Identities=24%  Similarity=0.388  Sum_probs=73.7

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++.    +.++.++|+||||+++|+|++|.+||.... .......+..+..+......+++.+++||.+||. +|.
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~  266 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQ  266 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcc
Confidence            5899873    468899999999999999999999998754 3444444554444333344578899999999999 599


Q ss_pred             CCCCHHHHhcCCccccCCC
Q 008997           76 SRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~~~   94 (547)
                      +||++.++++|+|+.....
T Consensus       267 ~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         267 DRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             cCcCHHHHHhChhhhccCc
Confidence            9999999999999976544


No 211
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.11  E-value=9.3e-11  Score=121.26  Aligned_cols=90  Identities=28%  Similarity=0.474  Sum_probs=66.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--CC-------------------C------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--KK-------------------P------   52 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--~~-------------------P------   52 (547)
                      +|||++. ..++.++|||||||++|+|++|..||.+... ...+.++...  ..                   +      
T Consensus       184 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
T cd07850         184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDH-IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYS  262 (353)
T ss_pred             cCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcc
Confidence            5899987 6799999999999999999999999986542 2222222110  00                   0      


Q ss_pred             ------Cc--------cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           53 ------EA--------LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        53 ------~~--------l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                            ..        .+...++.+++||.+||. +|.+||++.++|.||||+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         263 FEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             hhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence                  00        011245678999999999 6999999999999999975


No 212
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.11  E-value=1.1e-10  Score=115.38  Aligned_cols=84  Identities=19%  Similarity=0.280  Sum_probs=70.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|||||||++|||++ |..||.+.. ...+...+..+..+. .+..+++++.+|+.+||. +|.+|
T Consensus       193 ~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~~~~l~~~c~~~~p~~R  270 (283)
T cd05048         193 MPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS-NQEVIEMIRSRQLLP-CPEDCPARVYALMIECWNEIPARR  270 (283)
T ss_pred             cCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCC-CcccCCHHHHHHHHHHccCChhhC
Confidence            6899887 779999999999999999997 999998754 567777777665543 345678999999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++++
T Consensus       271 p~~~~i~~~  279 (283)
T cd05048         271 PRFKDIHTR  279 (283)
T ss_pred             cCHHHHHHH
Confidence            999999864


No 213
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.11  E-value=1.1e-10  Score=123.59  Aligned_cols=93  Identities=22%  Similarity=0.437  Sum_probs=81.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskRp   78 (547)
                      ||||++. +.|+..+|+|++||++|||+.|++||.+.. ..++++.|+....  .+++.+|.++.++.+..|.+ |.+|+
T Consensus       517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD-E~elF~aI~ehnv--syPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED-EDELFQAIMEHNV--SYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHHccC--cCcccccHHHHHHHHHHhhcCCcccc
Confidence            6999998 999999999999999999999999999954 6888888887654  34567899999999999996 99998


Q ss_pred             C-----HHHHhcCCccccCCCCc
Q 008997           79 S-----ARELLTDPFLQIDDYDS   96 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~~   96 (547)
                      .     -.++..||||+..+|..
T Consensus       594 Gcg~~ge~di~~H~FFR~iDWek  616 (683)
T KOG0696|consen  594 GCGPEGERDIREHPFFRRIDWEK  616 (683)
T ss_pred             CCCCccccchhhCcchhhccHHH
Confidence            5     46789999999998864


No 214
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.11  E-value=1.7e-10  Score=115.02  Aligned_cols=89  Identities=21%  Similarity=0.446  Sum_probs=64.6

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCC-----------------------CC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKK-----------------------PE   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~-----------------------P~   53 (547)
                      +|||++.  ..++.++||||||+++|+|++|..||.+.......+..+..  +..                       +.
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07870         170 RPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQ  249 (291)
T ss_pred             cCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCc
Confidence            5899886  35788999999999999999999999865433332222211  000                       00


Q ss_pred             c---ccc--CCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 A---LFK--VEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ~---l~~--~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                      .   .+.  ..++.+.+|+.+||. +|++|||+.+++.||||
T Consensus       250 ~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         250 QLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             chhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            0   001  125688999999999 69999999999999998


No 215
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.10  E-value=1.6e-10  Score=113.18  Aligned_cols=86  Identities=23%  Similarity=0.425  Sum_probs=70.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||+|+++++|++|..||.... ....+..+.....  .++..+++.+.+||.+||. +|.+||
T Consensus       189 ~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~  265 (280)
T cd05581         189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-EYLTFQKILKLEY--SFPPNFPPDAKDLIEKLLVLDPQDRL  265 (280)
T ss_pred             cCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHhcCC--CCCCccCHHHHHHHHHHhcCCHhhCC
Confidence            5788876 567889999999999999999999998754 4455555554333  2334568999999999999 599999


Q ss_pred             CH----HHHhcCCcc
Q 008997           79 SA----RELLTDPFL   89 (547)
Q Consensus        79 Sa----~ELLkHPff   89 (547)
                      ++    .++++||||
T Consensus       266 ~~~~~~~~ll~~~~~  280 (280)
T cd05581         266 GVNEGYDELKAHPFF  280 (280)
T ss_pred             CcccCHHHHhcCCCC
Confidence            99    999999998


No 216
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.10  E-value=1.5e-10  Score=118.42  Aligned_cols=84  Identities=21%  Similarity=0.385  Sum_probs=67.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|||++ |..||.+......+...+..+..+ ..+...++.+++|+.+||. +|.+|
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~R  321 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM-RAPENATPEIYRIMLACWQGDPKER  321 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHccCChhhC
Confidence            6999987 779999999999999999997 999998755334445555544433 2345678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       322 Ps~~el~~  329 (338)
T cd05102         322 PTFSALVE  329 (338)
T ss_pred             cCHHHHHH
Confidence            99999874


No 217
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.10  E-value=2.2e-10  Score=108.18  Aligned_cols=89  Identities=33%  Similarity=0.518  Sum_probs=71.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccC-CCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKV-EDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~-~S~elkdLI~kCL~-dPskR   77 (547)
                      ++||++. ..++.++|||++|+++++|++|..||........+...+..+......... ++.++.+++.+||. +|.+|
T Consensus       153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  232 (244)
T smart00220      153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKR  232 (244)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhc
Confidence            5788876 678889999999999999999999998744456666666555443222221 78899999999999 69999


Q ss_pred             CCHHHHhcCCcc
Q 008997           78 LSARELLTDPFL   89 (547)
Q Consensus        78 pSa~ELLkHPff   89 (547)
                      |++.++++||||
T Consensus       233 p~~~~~~~~~~~  244 (244)
T smart00220      233 LTAEEALQHPFF  244 (244)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997


No 218
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.10  E-value=4.5e-11  Score=115.87  Aligned_cols=89  Identities=33%  Similarity=0.583  Sum_probs=66.6

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCC--chHHHHHHHHhCCCCCcc--ccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECT--HPAQIYKKVISGKKPEAL--FKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s--~~~qI~~kIlsg~~P~~l--~~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++.  ..++.++||||+|+++|+|++|..||....  ....+..+......+...  .....+.+++||.+||. +
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  244 (260)
T PF00069_consen  165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKD  244 (260)
T ss_dssp             SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCC
Confidence            5899987  678899999999999999999999998752  122333333332221111  11124799999999999 6


Q ss_pred             cCCCCCHHHHhcCCcc
Q 008997           74 VSSRLSARELLTDPFL   89 (547)
Q Consensus        74 PskRpSa~ELLkHPff   89 (547)
                      |.+||++.++++||||
T Consensus       245 p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  245 PEQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGGSTTHHHHHTSGGG
T ss_pred             hhHCcCHHHHhcCCCC
Confidence            9999999999999998


No 219
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.10  E-value=1.5e-10  Score=117.60  Aligned_cols=91  Identities=26%  Similarity=0.384  Sum_probs=70.0

Q ss_pred             CCccccc-c-cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CC-----------------------
Q 008997            1 MAPEVYE-E-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PE-----------------------   53 (547)
Q Consensus         1 MAPEVL~-~-~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~-----------------------   53 (547)
                      +|||++. . .++.++|+||+|+++|+|++|.+||.+.. ....+..+.....  +.                       
T Consensus       173 ~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (330)
T cd07834         173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD-YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPK  251 (330)
T ss_pred             CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC-HHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCc
Confidence            5899987 4 68899999999999999999999998754 3444444433110  00                       


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                          ...+..++.+++||.+||. +|.+||++.+++.||||+..
T Consensus       252 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         252 KPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             chhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence                0112357889999999999 69999999999999999864


No 220
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10  E-value=1.7e-10  Score=123.88  Aligned_cols=92  Identities=29%  Similarity=0.468  Sum_probs=75.2

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH-hCCC-------------------CC------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI-SGKK-------------------PE------   53 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl-sg~~-------------------P~------   53 (547)
                      |||+|.  +-|+.++|+|++|||++|+.+-++.|.|.+..++|++... -|.+                   |.      
T Consensus       177 APEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l  256 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPL  256 (538)
T ss_pred             chHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCCh
Confidence            899988  6799999999999999999999999999888888876431 1111                   11      


Q ss_pred             -ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 -ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 -~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                       .+.+..++++.++|.+||. ||.+||+|.++|+||||+...
T Consensus       257 ~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  257 KDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             HHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence             0123368899999999999 999999999999999999753


No 221
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.10  E-value=1.7e-10  Score=118.57  Aligned_cols=93  Identities=20%  Similarity=0.415  Sum_probs=71.7

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC---ccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE---ALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~---~l~~~~S~elkdLI~kCL   71 (547)
                      ||||++.      +.|+.++||||+||++|+|++|..||.+.. ..+.+..+.......   .....+++.+++||++||
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll  248 (331)
T cd05597         170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLI  248 (331)
T ss_pred             cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHc
Confidence            6999986      347889999999999999999999998743 556666665433211   112347899999999998


Q ss_pred             cc---cCCCCCHHHHhcCCccccCCC
Q 008997           72 AT---VSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        72 ~d---PskRpSa~ELLkHPff~~~~~   94 (547)
                      ..   +..|+++.+++.||||...++
T Consensus       249 ~~~~~r~~r~~~~~~l~hp~~~~~~~  274 (331)
T cd05597         249 CSPETRLGRNGLQDFKDHPFFEGIDW  274 (331)
T ss_pred             cCcccccCCCCHHHHhcCCCCCCCCH
Confidence            74   344889999999999987654


No 222
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.10  E-value=2.6e-10  Score=112.64  Aligned_cols=89  Identities=26%  Similarity=0.423  Sum_probs=65.1

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC--------------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP--------------------------   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P--------------------------   52 (547)
                      ||||++.  ..++.++|+||||+++++|++|.+||..........+...-...+                          
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         165 RAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             cCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            6899885  457889999999999999999999998754333332211100000                          


Q ss_pred             -CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           53 -EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        53 -~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                       .......+..+++||.+||. +|.+||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         245 LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence             00111236789999999999 69999999999999997


No 223
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.10  E-value=1.6e-10  Score=114.60  Aligned_cols=90  Identities=31%  Similarity=0.487  Sum_probs=72.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ...+...+..+..+ .+...++.++.+|+.+||. +|.+||
T Consensus       168 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp  245 (277)
T cd06641         168 MAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-PMKVLFLIPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRP  245 (277)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-hHHHHHHHhcCCCC-CCCcccCHHHHHHHHHHccCChhhCc
Confidence            5899877 567889999999999999999999998643 44455544444332 2344578899999999999 699999


Q ss_pred             CHHHHhcCCccccC
Q 008997           79 SARELLTDPFLQID   92 (547)
Q Consensus        79 Sa~ELLkHPff~~~   92 (547)
                      ++.++++||||...
T Consensus       246 ~~~~~l~~~~~~~~  259 (277)
T cd06641         246 TAKELLKHKFIVRF  259 (277)
T ss_pred             CHHHHHhCHHHhhh
Confidence            99999999999864


No 224
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.10  E-value=1.6e-10  Score=115.09  Aligned_cols=89  Identities=24%  Similarity=0.352  Sum_probs=64.2

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh---CCC----------------------CC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS---GKK----------------------PE   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls---g~~----------------------P~   53 (547)
                      +|||++.  ..++.++||||+|+++|+|++|..||.+..........+..   ...                      +.
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (291)
T cd07844         170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPR  249 (291)
T ss_pred             CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCCh
Confidence            5899876  45889999999999999999999999765422222222211   000                      00


Q ss_pred             ---ccccCCC--HHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 ---ALFKVED--PEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ---~l~~~~S--~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                         .....++  ..+.+|+.+||. +|.+||++.+++.||||
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         250 PLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence               0011233  788999999999 69999999999999998


No 225
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.09  E-value=2.2e-10  Score=110.71  Aligned_cols=87  Identities=30%  Similarity=0.508  Sum_probs=71.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||.+. ..++.++|+||+|+++|+|++|..||.... ...+...+..+..+. .....+.++++++.+||. +|.+||
T Consensus       168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp  245 (256)
T cd08530         168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-MQDLRYKVQRGKYPP-IPPIYSQDLQNFIRSMLQVKPKLRP  245 (256)
T ss_pred             cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCCCC-CchhhCHHHHHHHHHHcCCCcccCC
Confidence            4788877 668889999999999999999999998754 455556666655543 234578899999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.++++||++
T Consensus       246 ~~~~~l~~p~~  256 (256)
T cd08530         246 NCDKILASPAV  256 (256)
T ss_pred             CHHHHhcCCCC
Confidence            99999999985


No 226
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.09  E-value=1.3e-10  Score=125.47  Aligned_cols=95  Identities=20%  Similarity=0.369  Sum_probs=85.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskRp   78 (547)
                      +|||++. ++++.++|+|++||++|||++|.+||.+. ++..+|+.|++|.-...+|+.++..+.+||+++..+ |+.|+
T Consensus       586 VAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERL  664 (732)
T KOG0614|consen  586 VAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-DPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERL  664 (732)
T ss_pred             ccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC-chHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhh
Confidence            5899987 88999999999999999999999999994 589999999999876677788999999999999985 99998


Q ss_pred             C-----HHHHhcCCccccCCCCc
Q 008997           79 S-----ARELLTDPFLQIDDYDS   96 (547)
Q Consensus        79 S-----a~ELLkHPff~~~~~~~   96 (547)
                      .     +.+|.+|.||...+|.-
T Consensus       665 G~~~~gI~DIkkH~Wf~gfdweg  687 (732)
T KOG0614|consen  665 GYQKGGINDIKKHRWFEGFDWEG  687 (732)
T ss_pred             ccccCChHHHHhhhhhhcCChhh
Confidence            5     89999999999988753


No 227
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.09  E-value=1.5e-10  Score=126.16  Aligned_cols=91  Identities=30%  Similarity=0.401  Sum_probs=66.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC-------chHHHHHHHHhCCC-----CC--------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT-------HPAQIYKKVISGKK-----PE--------------   53 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s-------~~~qI~~kIlsg~~-----P~--------------   53 (547)
                      ||||++. ..|+.++|||||||++|||++|..|+....       ...++.+.+.....     +.              
T Consensus       329 ~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~  408 (461)
T PHA03211        329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA  408 (461)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh
Confidence            6899988 679999999999999999999876543211       12344444333221     00              


Q ss_pred             ----------ccc---cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           54 ----------ALF---KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        54 ----------~l~---~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                                ..|   ..++..+++||.+||. +|.+|||+.|+|+||||+.
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        409 ARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                      001   1346689999999999 7999999999999999974


No 228
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.09  E-value=1.9e-10  Score=114.93  Aligned_cols=92  Identities=21%  Similarity=0.354  Sum_probs=67.8

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC-CC-------------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK-KP-------------------------   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~-~P-------------------------   52 (547)
                      +|||++.  ..++.++|+|||||++|+|++|.+||.+... ...+.++.... .+                         
T Consensus       169 ~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (298)
T cd07841         169 RAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPL  247 (298)
T ss_pred             eCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcch
Confidence            5789875  4678899999999999999999888876543 23333332110 00                         


Q ss_pred             CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           53 EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        53 ~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                      .......+..+++||.+||. +|.+||++.+++.|+||+...
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         248 KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence            00113346789999999999 699999999999999999753


No 229
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.08  E-value=1.4e-10  Score=135.86  Aligned_cols=91  Identities=20%  Similarity=0.331  Sum_probs=73.7

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.   ..|+.++|||||||++|+|++|..||.......+++..+..+..  ......++++.+||.+||. +|.+
T Consensus       208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~--lpi~~~S~eL~dLI~~~L~~dPee  285 (1021)
T PTZ00266        208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD--LPIKGKSKELNILIKNLLNLSAKE  285 (1021)
T ss_pred             cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC--CCcCCCCHHHHHHHHHHhcCChhH
Confidence            6999985   45899999999999999999999999876555555555544322  2223468999999999999 6999


Q ss_pred             CCCHHHHhcCCccccCC
Q 008997           77 RLSARELLTDPFLQIDD   93 (547)
Q Consensus        77 RpSa~ELLkHPff~~~~   93 (547)
                      ||++.++|.|+||....
T Consensus       286 RPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        286 RPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             CcCHHHHhccHHHhhcC
Confidence            99999999999998653


No 230
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.08  E-value=1.7e-10  Score=118.29  Aligned_cols=91  Identities=25%  Similarity=0.421  Sum_probs=67.4

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CCC-----------------------CC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GKK-----------------------PE   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~~-----------------------P~   53 (547)
                      +|||++.  ..++.++||||||+++|+|++|++||.+.....++ ..+..  +..                       +.
T Consensus       178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL-KLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQP  256 (334)
T ss_pred             cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH-HHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCC
Confidence            4799876  46899999999999999999999999765422221 11110  100                       00


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                          ...+..++++++||.+||+ +|.+||++.+++.||||...
T Consensus       257 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         257 VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhc
Confidence                0123468899999999999 69999999999999999864


No 231
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.08  E-value=2.6e-10  Score=112.47  Aligned_cols=83  Identities=18%  Similarity=0.366  Sum_probs=68.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++|+|++ |..||.+.. ...+...+..+..+. .+..++..+++|+.+||. +|.+|
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  268 (280)
T cd05049         191 MPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS-NEEVIECITQGRLLQ-RPRTCPSEVYDIMLGCWKRDPQQR  268 (280)
T ss_pred             cChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHcCCCcccC
Confidence            6899988 779999999999999999998 999998754 456666666665433 334578999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       269 p~~~eil~  276 (280)
T cd05049         269 INIKDIHE  276 (280)
T ss_pred             CCHHHHHH
Confidence            99999874


No 232
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.08  E-value=2.8e-10  Score=113.67  Aligned_cols=92  Identities=22%  Similarity=0.380  Sum_probs=73.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+|||||++|||++ |..||.+.. ...+...+..+..+. .+...++.+++++.+||. +|.+|
T Consensus       188 ~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  265 (288)
T cd05061         188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-NEQVLKFVMDGGYLD-QPDNCPERVTDLMRMCWQFNPKMR  265 (288)
T ss_pred             cCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCChhHC
Confidence            6899887 678999999999999999998 788998744 456666666554432 234567899999999999 69999


Q ss_pred             CCHHHHhc------CCccccCCC
Q 008997           78 LSARELLT------DPFLQIDDY   94 (547)
Q Consensus        78 pSa~ELLk------HPff~~~~~   94 (547)
                      |++.++++      ||||+..+|
T Consensus       266 ps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         266 PTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             cCHHHHHHHHHhhcCCCCCCCCC
Confidence            99999975      899987654


No 233
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.07  E-value=2.6e-10  Score=110.08  Aligned_cols=86  Identities=30%  Similarity=0.524  Sum_probs=70.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ...+...+.....  .++...+..+++|+++||. +|..||
T Consensus       160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~~l~~~p~~R~  236 (250)
T cd05123         160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED-RKEIYEKILKDPL--RFPEFLSPEARDLISGLLQKDPTKRL  236 (250)
T ss_pred             cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhcCCHhhCC
Confidence            5788876 557789999999999999999999997644 4566666665433  2445568999999999999 699999


Q ss_pred             CH---HHHhcCCcc
Q 008997           79 SA---RELLTDPFL   89 (547)
Q Consensus        79 Sa---~ELLkHPff   89 (547)
                      ++   .+++.||||
T Consensus       237 ~~~~~~~l~~~~~f  250 (250)
T cd05123         237 GSGGAEEIKAHPFF  250 (250)
T ss_pred             CcccHHHHHhCCCC
Confidence            99   999999998


No 234
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.07  E-value=2.3e-10  Score=117.65  Aligned_cols=91  Identities=26%  Similarity=0.426  Sum_probs=67.2

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh--CC-----------------------CC-
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS--GK-----------------------KP-   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls--g~-----------------------~P-   52 (547)
                      +|||++.  ..++.++||||||+++|+|++|.+||.+... ...+..+..  +.                       .+ 
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPR  253 (337)
T ss_pred             cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccc
Confidence            6899876  4688999999999999999999999976432 111111110  00                       00 


Q ss_pred             ---CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           53 ---EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        53 ---~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         ....+.+++++++||++||. +|.+||++.++++||||...
T Consensus       254 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         254 QSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             cCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence               01124578899999999999 69999999999999999754


No 235
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.07  E-value=2.9e-11  Score=141.12  Aligned_cols=91  Identities=34%  Similarity=0.479  Sum_probs=82.1

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      ||||++.    ++...++||||+||++.||+||+.||....+..+|+.+|..|..|.. |..++++.++||.+||. ||+
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~-P~~ls~~g~dFle~Cl~~dP~ 1483 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQI-PERLSSEGRDFLEHCLEQDPK 1483 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCC-chhhhHhHHHHHHHHHhcCch
Confidence            8999997    45677999999999999999999999998888999999999988764 45599999999999999 799


Q ss_pred             CCCCHHHHhcCCccccC
Q 008997           76 SRLSARELLTDPFLQID   92 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~   92 (547)
                      +|.++.||+.|.|-+..
T Consensus      1484 ~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1484 MRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             hhhHHHHHHHhhccccc
Confidence            99999999999988654


No 236
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.07  E-value=2.7e-10  Score=112.00  Aligned_cols=88  Identities=28%  Similarity=0.411  Sum_probs=65.5

Q ss_pred             CCccccc-c-cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC--------------------CCCC-----
Q 008997            1 MAPEVYE-E-EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG--------------------KKPE-----   53 (547)
Q Consensus         1 MAPEVL~-~-~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg--------------------~~P~-----   53 (547)
                      +|||++. . .++.++|+||||+++|+|++|.+||.+.... ..+.++...                    ..+.     
T Consensus       165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (282)
T cd07829         165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKD  243 (282)
T ss_pred             CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhcccccccccccccCccc
Confidence            5899876 3 7889999999999999999999999875432 222222210                    0000     


Q ss_pred             --ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 --ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 --~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                        ...+..+..+++||.+||. +|++||++.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence              1112347789999999999 69999999999999998


No 237
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.07  E-value=1.6e-10  Score=113.27  Aligned_cols=87  Identities=26%  Similarity=0.397  Sum_probs=63.8

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc-c--ccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA-L--FKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~-l--~~~~S~elkdLI~kCL~-   72 (547)
                      ||||++.    ..++.++|+||+|+++|+|++|..||.... +......+........ .  ...++..+++||.+||. 
T Consensus       173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06646         173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH-PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTK  251 (267)
T ss_pred             cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc-hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhC
Confidence            6899874    457889999999999999999999997543 2222222222221111 1  12357899999999999 


Q ss_pred             ccCCCCCHHHHhcCCc
Q 008997           73 TVSSRLSARELLTDPF   88 (547)
Q Consensus        73 dPskRpSa~ELLkHPf   88 (547)
                      +|.+||+++++++|+|
T Consensus       252 ~P~~Rp~~~~il~~l~  267 (267)
T cd06646         252 NPKKRPTAERLLTHLF  267 (267)
T ss_pred             ChhhCcCHHHHhcCCC
Confidence            6999999999999987


No 238
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.06  E-value=2.6e-10  Score=113.10  Aligned_cols=84  Identities=23%  Similarity=0.347  Sum_probs=67.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|||||||++|+|++ |..||.+.. ...+...+.....+ ..+..++..+.+|+.+||. +|.+|
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~cl~~~p~~R  265 (277)
T cd05036         188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT-NQEVMEFVTGGGRL-DPPKGCPGPVYRIMTDCWQHTPEDR  265 (277)
T ss_pred             CCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccC
Confidence            6899987 679999999999999999996 999998754 44555555444332 2345578999999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.++++|
T Consensus       266 ps~~~vl~~  274 (277)
T cd05036         266 PNFATILER  274 (277)
T ss_pred             cCHHHHHHH
Confidence            999999876


No 239
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.06  E-value=3.8e-10  Score=108.75  Aligned_cols=87  Identities=30%  Similarity=0.590  Sum_probs=69.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+|++|+++|+|++|..||.... .......+.....+ .++..++..+++|+.+||. +|++||
T Consensus       166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~  243 (254)
T cd06627         166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN-PMAALFRIVQDDHP-PLPEGISPELKDFLMQCFQKDPNLRP  243 (254)
T ss_pred             cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHhccCCC-CCCCCCCHHHHHHHHHHHhCChhhCc
Confidence            5788876 557889999999999999999999998754 33333333333332 2445678999999999999 699999


Q ss_pred             CHHHHhcCCcc
Q 008997           79 SARELLTDPFL   89 (547)
Q Consensus        79 Sa~ELLkHPff   89 (547)
                      ++.+++.||||
T Consensus       244 ~~~~~l~~~~~  254 (254)
T cd06627         244 TAKQLLKHPWI  254 (254)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997


No 240
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.06  E-value=1.8e-10  Score=127.30  Aligned_cols=91  Identities=25%  Similarity=0.414  Sum_probs=69.5

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH-hCCCCC--------------------------
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI-SGKKPE--------------------------   53 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl-sg~~P~--------------------------   53 (547)
                      ||||+. .+|+.+.|+||||||++||++|.+.|.|.+...++...+. -|.+|.                          
T Consensus       356 APEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~  435 (586)
T KOG0667|consen  356 APEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET  435 (586)
T ss_pred             cchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence            899999 7899999999999999999999999999765555554321 111100                          


Q ss_pred             c----------------------cc-----------cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 A----------------------LF-----------KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ~----------------------l~-----------~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                      .                      .+           ..-...+.+||++||. +|.+|+|+.++|+||||...
T Consensus       436 ~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  436 SAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             cccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence            0                      00           0113467899999999 89999999999999999854


No 241
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.06  E-value=3.3e-10  Score=111.42  Aligned_cols=88  Identities=24%  Similarity=0.388  Sum_probs=65.6

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-C-Cc----------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-P-EA----------------------   54 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P-~~----------------------   54 (547)
                      +|||++.  ..++.++||||||+++|+|++|..||.... .......+..... + ..                      
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T cd07840         168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST-ELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKR  246 (287)
T ss_pred             CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCchhhccccccchhhhhccccccchh
Confidence            6899776  457899999999999999999999998755 3333333322100 0 00                      


Q ss_pred             ----cccC-CCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           55 ----LFKV-EDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        55 ----l~~~-~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                          .... .++.+.+++.+||. +|.+||++.+++.||||
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         247 RLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                0111 37889999999999 69999999999999997


No 242
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.06  E-value=2.6e-10  Score=114.43  Aligned_cols=89  Identities=21%  Similarity=0.416  Sum_probs=63.6

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchH--------HHHHHHHh----------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPA--------QIYKKVIS----------------------   48 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~--------qI~~kIls----------------------   48 (547)
                      +|||++.  ..++.++||||||+++|+|++|.+||.+.....        ..+..+..                      
T Consensus       182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  261 (316)
T cd07842         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTL  261 (316)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhh
Confidence            6899876  458899999999999999999999997543211        00111100                      


Q ss_pred             --C----CCC-Cc------cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           49 --G----KKP-EA------LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        49 --g----~~P-~~------l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                        .    ..+ ..      .+...+.++.+|+.+||. +|.+||++.+++.||||
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         262 MKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence              0    000 00      001456789999999999 69999999999999998


No 243
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.05  E-value=1.9e-10  Score=112.14  Aligned_cols=82  Identities=24%  Similarity=0.330  Sum_probs=63.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++|+||+|+++|+|++|..||....  ..+.     .......+..+++.+++||.+||. +|.+|+
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~  221 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHP--SGIN-----THTTLNIPEWVSEEARSLLQQLLQFNPTERL  221 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCc--hhcc-----cccccCCcccCCHHHHHHHHHHccCCHHHhc
Confidence            6899887 678899999999999999999998876421  1111     111112334578999999999999 699999


Q ss_pred             CH-----HHHhcCCcc
Q 008997           79 SA-----RELLTDPFL   89 (547)
Q Consensus        79 Sa-----~ELLkHPff   89 (547)
                      ++     .++++||||
T Consensus       222 ~~~~~~~~~~~~h~~~  237 (237)
T cd05576         222 GAGVAGVEDIKSHPFF  237 (237)
T ss_pred             CCCccchHHHHcCCCC
Confidence            85     999999997


No 244
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.05  E-value=4.1e-10  Score=112.48  Aligned_cols=88  Identities=22%  Similarity=0.325  Sum_probs=65.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh---CCCCC----------------------
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS---GKKPE----------------------   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls---g~~P~----------------------   53 (547)
                      +|||++.  ..++.++|||||||++|+|++|++||.... ....+..+..   +..+.                      
T Consensus       184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (302)
T cd07864         184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRR  262 (302)
T ss_pred             cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhccccccccccccccccccccc
Confidence            5899876  457889999999999999999999998643 3332222222   11110                      


Q ss_pred             ---ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcc
Q 008997           54 ---ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFL   89 (547)
Q Consensus        54 ---~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff   89 (547)
                         ..+..+++.+++|+.+||. +|.+||++.+++.||||
T Consensus       263 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         263 RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence               0122357899999999999 69999999999999997


No 245
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.05  E-value=2.3e-10  Score=117.48  Aligned_cols=89  Identities=27%  Similarity=0.486  Sum_probs=72.8

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCC-------------------CCc-----
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKK-------------------PEA-----   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~-------------------P~~-----   54 (547)
                      |||.+.  -.|+..+|||++||++.||++|++-|.|.++..+++..... |..                   |..     
T Consensus       169 aPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ep  248 (396)
T KOG0593|consen  169 APELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEP  248 (396)
T ss_pred             ChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccc
Confidence            899988  58999999999999999999999999999888888764432 211                   110     


Q ss_pred             ---cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccc
Q 008997           55 ---LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQ   90 (547)
Q Consensus        55 ---l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~   90 (547)
                         -++.++.-+.+|+++||. +|.+|++.+++|.|+||.
T Consensus       249 Le~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  249 LERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             hhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence               123456778899999999 799999999999999994


No 246
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04  E-value=2.3e-10  Score=116.63  Aligned_cols=79  Identities=27%  Similarity=0.432  Sum_probs=72.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |+||++. .+|+.++||||+||++|||+.-++||.|. +..++.++|..|.+|+.+....|..+..||..|+. +|..||
T Consensus       195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP  273 (375)
T KOG0591|consen  195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRP  273 (375)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCC
Confidence            8999999 88999999999999999999999999996 68899999999988765546789999999999999 699999


Q ss_pred             CH
Q 008997           79 SA   80 (547)
Q Consensus        79 Sa   80 (547)
                      +.
T Consensus       274 ~t  275 (375)
T KOG0591|consen  274 DT  275 (375)
T ss_pred             Cc
Confidence            85


No 247
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.04  E-value=4.1e-10  Score=115.38  Aligned_cols=91  Identities=24%  Similarity=0.354  Sum_probs=67.9

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC---------------------------CC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG---------------------------KK   51 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg---------------------------~~   51 (547)
                      ||||++.  ..++.++|+||||+++|+|++|+.||.+...... ..++...                           ..
T Consensus       179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (337)
T cd07852         179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPR  257 (337)
T ss_pred             cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccc
Confidence            6899876  4688899999999999999999999986543322 2222111                           00


Q ss_pred             --CCccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           52 --PEALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        52 --P~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                        .....+..+.++++||.+||. +|.+||++.+++.||||+..
T Consensus       258 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         258 KPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             cchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence              011123368899999999999 69999999999999999864


No 248
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.04  E-value=2.3e-10  Score=117.72  Aligned_cols=94  Identities=17%  Similarity=0.411  Sum_probs=72.0

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc---ccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL---FKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l---~~~~S~elkdLI~kCL   71 (547)
                      ||||++.      +.|+.++||||||+++|+|++|+.||.+.. ....+.++........+   ...+++++++||.+||
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll  248 (331)
T cd05624         170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLI  248 (331)
T ss_pred             CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-HHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHc
Confidence            6899876      357889999999999999999999998744 55666666654321111   2346899999999999


Q ss_pred             cc-cC--CCCCHHHHhcCCccccCCCC
Q 008997           72 AT-VS--SRLSARELLTDPFLQIDDYD   95 (547)
Q Consensus        72 ~d-Ps--kRpSa~ELLkHPff~~~~~~   95 (547)
                      .. +.  .|++++++++||||+..+|.
T Consensus       249 ~~~~~~~~~~~~~~~~~h~~f~~~~~~  275 (331)
T cd05624         249 CSRERRLGQNGIEDFKKHAFFEGIDWE  275 (331)
T ss_pred             cCchhhcCCCCHHHHhcCCCcCCCCHH
Confidence            84 33  25789999999999976654


No 249
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.02  E-value=6.5e-10  Score=108.62  Aligned_cols=83  Identities=23%  Similarity=0.387  Sum_probs=68.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|+|++ |+.||.... ..++...+..+..+. .+...+..+.+|+.+||. +|.+|
T Consensus       168 ~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~c~~~~p~~R  245 (256)
T cd05114         168 SPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-NYEVVEMISRGFRLY-RPKLASMTVYEVMYSCWHEKPEGR  245 (256)
T ss_pred             CChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHccCCcccC
Confidence            6899987 678999999999999999999 899998754 566677777665432 234568899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       246 ps~~~l~~  253 (256)
T cd05114         246 PTFAELLR  253 (256)
T ss_pred             cCHHHHHH
Confidence            99999974


No 250
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.02  E-value=1.7e-10  Score=123.29  Aligned_cols=94  Identities=24%  Similarity=0.400  Sum_probs=75.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      |||||+. +.|+..+|+|++||++|||+.|..||.....   -.++-+.+++..  ..++..+|+++++|.+.+|+ +|.
T Consensus       353 MAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~--~ey~~kFS~eakslc~~LL~Kdp~  430 (591)
T KOG0986|consen  353 MAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDP--EEYSDKFSEEAKSLCEGLLTKDPE  430 (591)
T ss_pred             cCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcch--hhcccccCHHHHHHHHHHHccCHH
Confidence            8999999 7799999999999999999999999975321   123444444433  23446689999999999999 599


Q ss_pred             CCCC-----HHHHhcCCccccCCCCc
Q 008997           76 SRLS-----ARELLTDPFLQIDDYDS   96 (547)
Q Consensus        76 kRpS-----a~ELLkHPff~~~~~~~   96 (547)
                      +|+.     ++++..||||+..+|..
T Consensus       431 ~RLGcrg~ga~evk~HpfFk~lnw~r  456 (591)
T KOG0986|consen  431 KRLGCRGEGAQEVKEHPFFKDLNWRR  456 (591)
T ss_pred             HhccCCCcCcchhhhCcccccCCHhH
Confidence            9984     78999999999987753


No 251
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.01  E-value=6.9e-10  Score=108.66  Aligned_cols=83  Identities=22%  Similarity=0.358  Sum_probs=68.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|||++ |..||.... ...+...+..+..+. .+...++++++||.+||. +|..|
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~~~~~~p~~R  242 (257)
T cd05116         165 YAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK-GNEVTQMIESGERME-CPQRCPPEMYDLMKLCWTYGVDER  242 (257)
T ss_pred             cCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHhccCchhC
Confidence            6899887 678889999999999999997 999998743 566777776665432 445679999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+|..
T Consensus       243 p~~~~i~~  250 (257)
T cd05116         243 PGFAVVEL  250 (257)
T ss_pred             cCHHHHHH
Confidence            99998853


No 252
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.01  E-value=4e-10  Score=109.78  Aligned_cols=84  Identities=29%  Similarity=0.436  Sum_probs=68.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++|+||||+++|+|++|..||.... .......+..+..+. .+..++..+++||.+||. +|.+||
T Consensus       167 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp  244 (255)
T cd08219         167 VPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-WKNLILKVCQGSYKP-LPSHYSYELRSLIKQMFKRNPRSRP  244 (255)
T ss_pred             cCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-HHHHHHHHhcCCCCC-CCcccCHHHHHHHHHHHhCCcccCC
Confidence            6899987 668899999999999999999999998743 555666666665432 334578899999999999 699999


Q ss_pred             CHHHHhcC
Q 008997           79 SARELLTD   86 (547)
Q Consensus        79 Sa~ELLkH   86 (547)
                      ++.+++.-
T Consensus       245 ~~~~il~~  252 (255)
T cd08219         245 SATTILSR  252 (255)
T ss_pred             CHHHHhhc
Confidence            99999864


No 253
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.01  E-value=6.2e-10  Score=108.98  Aligned_cols=85  Identities=20%  Similarity=0.318  Sum_probs=67.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC-chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT-HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s-~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||+|+++|+|++|..||.... ....+...+.....+.......+..+++||.+||. +|.+|
T Consensus       173 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  252 (267)
T cd08228         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQR  252 (267)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccC
Confidence            6899887 678899999999999999999999986532 23455555555555444444568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       253 p~~~~vl~  260 (267)
T cd08228         253 PDIGYVHQ  260 (267)
T ss_pred             cCHHHHHH
Confidence            99999985


No 254
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.00  E-value=8e-10  Score=108.59  Aligned_cols=83  Identities=24%  Similarity=0.379  Sum_probs=67.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. ....+..+..+..+ ..+..+++++++|+.+||. +|++|
T Consensus       172 ~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~R  249 (263)
T cd05052         172 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKGYRM-ERPEGCPPKVYELMRACWQWNPSDR  249 (263)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHccCCcccC
Confidence            5899887 678899999999999999998 999998743 56666666554332 3445678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       250 p~~~~l~~  257 (263)
T cd05052         250 PSFAEIHQ  257 (263)
T ss_pred             CCHHHHHH
Confidence            99999864


No 255
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.00  E-value=5.3e-10  Score=121.07  Aligned_cols=82  Identities=21%  Similarity=0.345  Sum_probs=71.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      .|||.+. +.|+.++|||||||+|+||+| |+.||.+.+ ..+++..|.+|.... .|..+++++.++|..||. +|.+|
T Consensus       371 tAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-n~ev~~~le~GyRlp-~P~~CP~~vY~lM~~CW~~~P~~R  448 (468)
T KOG0197|consen  371 TAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-NEEVLELLERGYRLP-RPEGCPDEVYELMKSCWHEDPEDR  448 (468)
T ss_pred             cCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-HHHHHHHHhccCcCC-CCCCCCHHHHHHHHHHhhCCcccC
Confidence            4999998 899999999999999999997 999999976 577888888887643 245689999999999999 69999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      ||++.+.
T Consensus       449 PtF~~L~  455 (468)
T KOG0197|consen  449 PTFETLR  455 (468)
T ss_pred             CCHHHHH
Confidence            9999664


No 256
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.00  E-value=6.8e-10  Score=113.72  Aligned_cols=91  Identities=25%  Similarity=0.441  Sum_probs=67.1

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC-------------------------CCC-
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG-------------------------KKP-   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg-------------------------~~P-   52 (547)
                      +|||++.  ..++.++||||+|+++|+|++|.+||.+.. ....+..+...                         ..+ 
T Consensus       176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD-YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPK  254 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC-HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCC
Confidence            5899876  468999999999999999999999997643 22222211110                         000 


Q ss_pred             ---CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           53 ---EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        53 ---~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         ....+..+..+++|+.+||. +|.+||++.+++.||||+..
T Consensus       255 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         255 KPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             cchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence               01123357899999999999 69999999999999999754


No 257
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.00  E-value=5.8e-10  Score=115.43  Aligned_cols=85  Identities=22%  Similarity=0.388  Sum_probs=65.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++ |..||.+......+...+..+..+ ..+...++++.+++.+||. +|.+|
T Consensus       242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~R  320 (337)
T cd05054         242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM-RAPEYATPEIYSIMLDCWHNNPEDR  320 (337)
T ss_pred             cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC-CCCccCCHHHHHHHHHHccCChhhC
Confidence            6899887 779999999999999999997 999998743223333333333332 2334568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.++++|
T Consensus       321 Ps~~ell~~  329 (337)
T cd05054         321 PTFSELVEI  329 (337)
T ss_pred             cCHHHHHHH
Confidence            999999865


No 258
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.00  E-value=1.7e-10  Score=116.84  Aligned_cols=92  Identities=29%  Similarity=0.491  Sum_probs=77.6

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccc-c---CCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALF-K---VEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~-~---~~S~elkdLI~kCL~-   72 (547)
                      ||||.+.   .+|+.++|+||+||+|||++||..||.+.....+-+..|..|.+|.... .   .++..++.||..||. 
T Consensus       234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K  313 (361)
T KOG1006|consen  234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK  313 (361)
T ss_pred             cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence            8999997   4699999999999999999999999998766555556677777654332 1   268899999999999 


Q ss_pred             ccCCCCCHHHHhcCCccccC
Q 008997           73 TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~~   92 (547)
                      +-+.||...+|+++||++..
T Consensus       314 d~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  314 DRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             ccccCcchhhhhcCchhhhh
Confidence            59999999999999999864


No 259
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.00  E-value=4.6e-10  Score=120.73  Aligned_cols=89  Identities=31%  Similarity=0.486  Sum_probs=78.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskRp   78 (547)
                      |.||++. .+|+.|+|||||||++|||++-+++|.+. +...+..+|..+... +.+...+.+++.+|+.||.+ |..||
T Consensus       173 mcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-~m~~Li~ki~~~~~~-Plp~~ys~el~~lv~~~l~~~P~~RP  250 (426)
T KOG0589|consen  173 MCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-NMSELILKINRGLYS-PLPSMYSSELRSLVKSMLRKNPEHRP  250 (426)
T ss_pred             cCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-chHHHHHHHhhccCC-CCCccccHHHHHHHHHHhhcCCccCC
Confidence            7899998 78999999999999999999999999984 577888888887743 34566799999999999995 99999


Q ss_pred             CHHHHhcCCcccc
Q 008997           79 SARELLTDPFLQI   91 (547)
Q Consensus        79 Sa~ELLkHPff~~   91 (547)
                      ++.+||.+|.+..
T Consensus       251 sa~~LL~~P~l~~  263 (426)
T KOG0589|consen  251 SALELLRRPHLLR  263 (426)
T ss_pred             CHHHHhhChhhhh
Confidence            9999999988764


No 260
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.00  E-value=7.5e-10  Score=111.32  Aligned_cols=84  Identities=26%  Similarity=0.398  Sum_probs=68.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++ |..||.+.. ...++.++..+..+ ..+..++..+++|+.+||. +|.+|
T Consensus       185 ~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  262 (297)
T cd05089         185 MAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-CAELYEKLPQGYRM-EKPRNCDDEVYELMRQCWRDRPYER  262 (297)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899887 678999999999999999997 999998744 56666666655432 2345678999999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.++++.
T Consensus       263 p~~~~i~~~  271 (297)
T cd05089         263 PPFAQISVQ  271 (297)
T ss_pred             cCHHHHHHH
Confidence            999999754


No 261
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.00  E-value=7.5e-10  Score=110.65  Aligned_cols=82  Identities=20%  Similarity=0.362  Sum_probs=68.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.... ...+...+..+..+. .+...++++++|+.+||. +|.+|
T Consensus       189 ~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R  266 (288)
T cd05093         189 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-NNEVIECITQGRVLQ-RPRTCPKEVYDLMLGCWQREPHMR  266 (288)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHccCChhhC
Confidence            6899887 678999999999999999998 999998754 556667777665432 334578899999999999 69999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++.+++
T Consensus       267 pt~~~v~  273 (288)
T cd05093         267 LNIKEIH  273 (288)
T ss_pred             CCHHHHH
Confidence            9999985


No 262
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.00  E-value=5.4e-10  Score=111.71  Aligned_cols=88  Identities=19%  Similarity=0.359  Sum_probs=78.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ++||+.. ..++..+|+|++|++.||++.|.+||.... ..++|++|..-...  ++..++.++++||.+||. +|.+|+
T Consensus       189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~--~p~~is~~a~dlI~~ll~~~p~~r~  265 (281)
T KOG0580|consen  189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLK--FPSTISGGAADLISRLLVKNPIERL  265 (281)
T ss_pred             CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcccc--CCcccChhHHHHHHHHhccCccccc
Confidence            4899988 789999999999999999999999998755 67889999876653  346789999999999999 599999


Q ss_pred             CHHHHhcCCcccc
Q 008997           79 SARELLTDPFLQI   91 (547)
Q Consensus        79 Sa~ELLkHPff~~   91 (547)
                      +..+++.|||+..
T Consensus       266 ~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  266 ALTEVMDHPWIVA  278 (281)
T ss_pred             cHHHHhhhHHHHh
Confidence            9999999999974


No 263
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.00  E-value=8.1e-10  Score=108.09  Aligned_cols=84  Identities=20%  Similarity=0.303  Sum_probs=68.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |.+||.+.. ..+++..+..+..+. .+..+++.+.+++.+||. +|.+|
T Consensus       182 ~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  259 (273)
T cd05035         182 IAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE-NHEIYDYLRHGNRLK-QPEDCLDELYDLMYSCWRADPKDR  259 (273)
T ss_pred             cCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCC-CCcCCCHHHHHHHHHHcCCChhhC
Confidence            5899887 678999999999999999998 899998754 456666666554432 345678999999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++++
T Consensus       260 p~~~e~~~~  268 (273)
T cd05035         260 PTFTKLREV  268 (273)
T ss_pred             cCHHHHHHH
Confidence            999999754


No 264
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.99  E-value=5.2e-10  Score=120.23  Aligned_cols=92  Identities=14%  Similarity=0.322  Sum_probs=78.3

Q ss_pred             CCcccccc----c-CCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYEE----E-YNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~~----~-Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      ||||.+..    . -+.+.||||+||++|-|+.|+.||.+. ....++.+|.......+..+.+.+.+++||+++|. +|
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~-~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP  360 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD-FELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDP  360 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc-hHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcCh
Confidence            79999873    1 346899999999999999999999984 47889999998876544445678999999999999 59


Q ss_pred             CCCCCHHHHhcCCccccCC
Q 008997           75 SSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        75 skRpSa~ELLkHPff~~~~   93 (547)
                      .+|++..++..|||.....
T Consensus       361 ~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  361 EQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             hheeehhhheecceeccCC
Confidence            9999999999999998653


No 265
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.99  E-value=8.5e-10  Score=108.99  Aligned_cols=83  Identities=19%  Similarity=0.355  Sum_probs=67.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++||+++ |..||.+.. ...+...+..+..+ ..+..++..+.+++.+||. +|.+|
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~R  252 (266)
T cd05064         175 AAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS-GQDVIKAVEDGFRL-PAPRNCPNLLHQLMLDCWQKERGER  252 (266)
T ss_pred             cCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC-HHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHcCCCchhC
Confidence            6899887 789999999999999999774 999998754 45566666555433 2355678999999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+|++
T Consensus       253 P~~~~i~~  260 (266)
T cd05064         253 PRFSQIHS  260 (266)
T ss_pred             CCHHHHHH
Confidence            99999864


No 266
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.99  E-value=6.3e-10  Score=115.09  Aligned_cols=91  Identities=25%  Similarity=0.392  Sum_probs=67.3

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC-------------------------CCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK-------------------------KPE   53 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~-------------------------~P~   53 (547)
                      +|||++.  ..++.++||||+|+++|+|++|.+||..... ...+..+....                         .+.
T Consensus       184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (345)
T cd07877         184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK  262 (345)
T ss_pred             cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCC
Confidence            5899876  4688899999999999999999999976432 22222221110                         000


Q ss_pred             ----ccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ----ALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ----~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                          ......++++++||.+||. +|.+|+++.+++.||||+..
T Consensus       263 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         263 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence                0011357889999999999 69999999999999999864


No 267
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.98  E-value=9.7e-10  Score=109.98  Aligned_cols=83  Identities=23%  Similarity=0.407  Sum_probs=67.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.... ...+...+..+..+. .+...+..+.+|+.+||. +|.+|
T Consensus       192 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R  269 (291)
T cd05094         192 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS-NTEVIECITQGRVLE-RPRVCPKEVYDIMLGCWQREPQQR  269 (291)
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhCCCCCC-CCccCCHHHHHHHHHHcccChhhC
Confidence            6899887 678999999999999999998 999997744 455666665555432 334568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       270 pt~~~v~~  277 (291)
T cd05094         270 LNIKEIYK  277 (291)
T ss_pred             cCHHHHHH
Confidence            99999864


No 268
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.98  E-value=6.3e-10  Score=116.28  Aligned_cols=92  Identities=29%  Similarity=0.422  Sum_probs=73.3

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCC-----------------C---Cc----
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKK-----------------P---EA----   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~-----------------P---~~----   54 (547)
                      |||.+.  ..|+.++||||.||++.||+.|++-|.|.+...|+...+.- |.+                 |   ..    
T Consensus       193 aPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~  272 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHK  272 (364)
T ss_pred             CHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccccee
Confidence            899988  68999999999999999999999999997755555443321 110                 0   00    


Q ss_pred             -cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           55 -LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        55 -l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                       +.+..++++.+|+.++|. .|.+|.++.+++.||||....
T Consensus       273 ~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr  313 (364)
T KOG0658|consen  273 VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR  313 (364)
T ss_pred             ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence             234568999999999999 799999999999999998743


No 269
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.98  E-value=1.2e-09  Score=106.89  Aligned_cols=83  Identities=22%  Similarity=0.349  Sum_probs=67.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |.+||.... ..++...+..+... ..+..+++.+++||.+||. +|.+|
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~R  242 (257)
T cd05060         165 YAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK-GAEVIAMLESGERL-PRPEECPQEIYSIMLSCWKYRPEDR  242 (257)
T ss_pred             cCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhcCChhhC
Confidence            5899887 678999999999999999997 999998754 45566666555432 3345578999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       243 p~~~~l~~  250 (257)
T cd05060         243 PTFSELES  250 (257)
T ss_pred             cCHHHHHH
Confidence            99999864


No 270
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.98  E-value=9.6e-10  Score=108.85  Aligned_cols=84  Identities=21%  Similarity=0.371  Sum_probs=67.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. +.++.++||||||+++|+|++ |..||.+.. ...+...+..+..+ ..+...+..+++|+.+||. +|.+|
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  265 (277)
T cd05062         188 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-NEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMR  265 (277)
T ss_pred             cChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899987 678999999999999999998 789998754 45555555554433 2345568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       266 ps~~e~l~~  274 (277)
T cd05062         266 PSFLEIISS  274 (277)
T ss_pred             cCHHHHHHH
Confidence            999999854


No 271
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.98  E-value=1.1e-09  Score=105.54  Aligned_cols=84  Identities=21%  Similarity=0.351  Sum_probs=68.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||+|+++|+|++ |..||.... ..++...+..+... ..+..+++++.+++.+||. +|.+|
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  251 (262)
T cd00192         174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-NEEVLEYLRKGYRL-PKPEYCPDELYELMLSCWQLDPEDR  251 (262)
T ss_pred             cCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC-CCCccCChHHHHHHHHHccCCcccC
Confidence            5899887 678999999999999999998 699998753 56677777665433 2345568999999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       252 ps~~~l~~~  260 (262)
T cd00192         252 PTFSELVER  260 (262)
T ss_pred             cCHHHHHHh
Confidence            999999864


No 272
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.98  E-value=1.1e-09  Score=109.00  Aligned_cols=93  Identities=32%  Similarity=0.504  Sum_probs=70.0

Q ss_pred             CCccccc-c--cCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE-E--EYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~-~--~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++. .  .++.++|+||||+++|+|++|..||.....   ...+.+.+.....  ..+..+++.+++||.+||. +
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~  250 (288)
T cd05583         173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP--PFPKTMSAEARDFIQKLLEKD  250 (288)
T ss_pred             cCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC--CCCcccCHHHHHHHHHHhcCC
Confidence            5788876 2  367899999999999999999999964221   2333344444332  2344578899999999999 6


Q ss_pred             cCCCCC---HHHHhcCCccccCCCC
Q 008997           74 VSSRLS---ARELLTDPFLQIDDYD   95 (547)
Q Consensus        74 PskRpS---a~ELLkHPff~~~~~~   95 (547)
                      |++||+   +.++|+||||+...|.
T Consensus       251 p~~R~t~~~~~~~l~~~~~~~~~~~  275 (288)
T cd05583         251 PKKRLGANGADEIKNHPFFQGIDWD  275 (288)
T ss_pred             HhhccCcchHHHHhcCcccccCCHH
Confidence            999998   5678999999987653


No 273
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.98  E-value=7.8e-10  Score=116.36  Aligned_cols=84  Identities=23%  Similarity=0.369  Sum_probs=65.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++ |..||........+...+..+ .....+...++++++|+.+||. +|.+|
T Consensus       281 ~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~R  359 (374)
T cd05106         281 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRG-YQMSRPDFAPPEIYSIMKMCWNLEPTER  359 (374)
T ss_pred             eCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcc-cCccCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6999987 779999999999999999997 999998754333333333333 2222334568999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       360 Ps~~~l~~  367 (374)
T cd05106         360 PTFSQISQ  367 (374)
T ss_pred             cCHHHHHH
Confidence            99999864


No 274
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.97  E-value=9e-10  Score=113.84  Aligned_cols=91  Identities=29%  Similarity=0.416  Sum_probs=68.4

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC----------------------C----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK----------------------P----   52 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~----------------------P----   52 (547)
                      ||||++.  ..++.++|+||+|+++|+|++|.+||.+.... ..+..+.....                      +    
T Consensus       182 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (343)
T cd07880         182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRK  260 (343)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCc
Confidence            5899876  35888999999999999999999999875432 22222221110                      0    


Q ss_pred             ---CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           53 ---EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        53 ---~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         ....+.+++.++++|.+||. +|.+||++.+++.||||+..
T Consensus       261 ~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         261 KDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             chHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence               01123567889999999999 69999999999999999864


No 275
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.97  E-value=1e-09  Score=107.40  Aligned_cols=84  Identities=24%  Similarity=0.347  Sum_probs=66.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc-hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH-PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~-~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|+|++|..||.+... .....+.+.....+...+...++.+++|+.+||. +|.+|
T Consensus       173 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  252 (267)
T cd08229         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR  252 (267)
T ss_pred             cCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccC
Confidence            5899887 6788899999999999999999999975432 2344455555554444445678999999999999 69999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++.+++
T Consensus       253 pt~~~i~  259 (267)
T cd08229         253 PDITYVY  259 (267)
T ss_pred             CCHHHHH
Confidence            9999776


No 276
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.97  E-value=1.2e-09  Score=106.79  Aligned_cols=83  Identities=20%  Similarity=0.369  Sum_probs=65.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.+.. ...+...+..+... .....++.++.+|+.+||. +|.+|
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  248 (261)
T cd05072         171 TAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS-NSDVMSALQRGYRM-PRMENCPDELYDIMKTCWKEKAEER  248 (261)
T ss_pred             CCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHccCCcccC
Confidence            6899887 678899999999999999998 999998744 45555555544332 2334578899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       249 p~~~~i~~  256 (261)
T cd05072         249 PTFDYLQS  256 (261)
T ss_pred             cCHHHHHH
Confidence            99998863


No 277
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.97  E-value=1.3e-09  Score=107.95  Aligned_cols=83  Identities=17%  Similarity=0.241  Sum_probs=68.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |..||.+.. ...+...+..+..+. .+...+..+.+|+.+||. +|..|
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~R  270 (283)
T cd05091         193 MSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-NQDVIEMIRNRQVLP-CPDDCPAWVYTLMLECWNEFPSRR  270 (283)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHhCCCcccC
Confidence            6899987 778999999999999999998 888998744 567777777665432 334578899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       271 P~~~~i~~  278 (283)
T cd05091         271 PRFKDIHS  278 (283)
T ss_pred             CCHHHHHH
Confidence            99999975


No 278
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.97  E-value=6.5e-10  Score=125.83  Aligned_cols=82  Identities=21%  Similarity=0.346  Sum_probs=72.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskR   77 (547)
                      |+||.+. +.|++++|||||||+|||+++ |+.||.+.++ .+++..|..|.. ..-+..++.++.+||..||+. |++|
T Consensus       672 MppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~R  749 (774)
T KOG1026|consen  672 MPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-QEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRR  749 (774)
T ss_pred             CCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-HHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccC
Confidence            8999998 899999999999999999996 9999999875 677778888877 345678899999999999995 9999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++++|-
T Consensus       750 PsF~eI~  756 (774)
T KOG1026|consen  750 PSFKEIH  756 (774)
T ss_pred             CCHHHHH
Confidence            9999983


No 279
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.96  E-value=1.2e-09  Score=108.98  Aligned_cols=93  Identities=25%  Similarity=0.447  Sum_probs=71.2

Q ss_pred             CCccccc---ccCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE---EEYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~---~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++.   ..++.++||||||+++|+|++|..||.....   ...+...+.....+  .+..+++.+.+|+.+||. +
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~l~~~  250 (290)
T cd05613         173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP--YPQEMSALAKDIIQRLLMKD  250 (290)
T ss_pred             CChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC--CCccCCHHHHHHHHHHhcCC
Confidence            5899876   3577899999999999999999999964221   23333333333322  344578999999999999 5


Q ss_pred             cCCCC-----CHHHHhcCCccccCCCC
Q 008997           74 VSSRL-----SARELLTDPFLQIDDYD   95 (547)
Q Consensus        74 PskRp-----Sa~ELLkHPff~~~~~~   95 (547)
                      |.+|+     ++.+++.||||+..+|.
T Consensus       251 p~~R~~~~~~~~~~l~~~~~~~~~~~~  277 (290)
T cd05613         251 PKKRLGCGPSDADEIKKHPFFQKINWD  277 (290)
T ss_pred             HHHhcCCCCCCHHHHHcCcccccCCHH
Confidence            99997     89999999999987753


No 280
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.96  E-value=1.3e-09  Score=108.21  Aligned_cols=84  Identities=20%  Similarity=0.317  Sum_probs=68.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|||++ |..||.+.. ...+...+.....+ ..+..+++.+++|+.+||. +|.+|
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~R  270 (283)
T cd05090         193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS-NQEVIEMVRKRQLL-PCSEDCPPRMYSLMTECWQEGPSRR  270 (283)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcccCcccC
Confidence            5899887 678999999999999999998 999998743 45566666555433 2445678999999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++++
T Consensus       271 p~~~~i~~~  279 (283)
T cd05090         271 PRFKDIHTR  279 (283)
T ss_pred             cCHHHHHHH
Confidence            999998764


No 281
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.96  E-value=1.5e-09  Score=111.71  Aligned_cols=91  Identities=31%  Similarity=0.427  Sum_probs=66.6

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH---------------h---------CC----
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI---------------S---------GK----   50 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl---------------s---------g~----   50 (547)
                      +|||++.  ..++.++|+||||+++|+|++|.+||.+... ...+..+.               .         ..    
T Consensus       172 ~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (328)
T cd07856         172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREP  250 (328)
T ss_pred             cCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCC
Confidence            5899876  4689999999999999999999999976432 11111110               0         00    


Q ss_pred             CC-CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           51 KP-EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        51 ~P-~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                      .+ ....+..++.++++|.+||. +|.+||++.+++.||||...
T Consensus       251 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         251 VPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             CcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence            00 00113467899999999999 69999999999999999754


No 282
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.95  E-value=5.2e-10  Score=110.66  Aligned_cols=83  Identities=30%  Similarity=0.574  Sum_probs=65.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++||+++ |..||... ...++...+..+..+. .+..++..+.++|.+||. +|.+|
T Consensus       172 ~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~C~~~~p~~R  249 (259)
T PF07714_consen  172 LAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-DNEEIIEKLKQGQRLP-IPDNCPKDIYSLIQQCWSHDPEKR  249 (259)
T ss_dssp             S-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-CHHHHHHHHHTTEETT-SBTTSBHHHHHHHHHHT-SSGGGS
T ss_pred             cccccccccccccccccccccccccccccccccccccc-ccccccccccccccce-eccchhHHHHHHHHHHcCCChhhC
Confidence            6899987 678999999999999999999 78999875 4677777776665433 345678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       250 Ps~~~i~~  257 (259)
T PF07714_consen  250 PSFQEILQ  257 (259)
T ss_dssp             --HHHHHH
T ss_pred             cCHHHHHh
Confidence            99999874


No 283
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.95  E-value=1.8e-09  Score=105.16  Aligned_cols=84  Identities=21%  Similarity=0.328  Sum_probs=66.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.... ..++.+.+.........+...+..+.+++.+||. +|++|
T Consensus       167 ~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  245 (257)
T cd05040         167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS-GSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADR  245 (257)
T ss_pred             cCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccC
Confidence            5899887 678999999999999999998 999998654 4556655553222222334568899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       246 ps~~~~~~  253 (257)
T cd05040         246 PTFAALRE  253 (257)
T ss_pred             CCHHHHHH
Confidence            99999874


No 284
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.95  E-value=1.4e-09  Score=106.70  Aligned_cols=84  Identities=21%  Similarity=0.320  Sum_probs=68.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. ..+++..+..+..+. .+...+..++++|.+||. +|.+|
T Consensus       181 ~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  258 (272)
T cd05075         181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE-NSEIYDYLRQGNRLK-QPPDCLDGLYSLMSSCWLLNPKDR  258 (272)
T ss_pred             CCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCCcccC
Confidence            5788877 678999999999999999998 899998744 566777776665432 234568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++++
T Consensus       259 ps~~~l~~~  267 (272)
T cd05075         259 PSFETLRCE  267 (272)
T ss_pred             cCHHHHHHH
Confidence            999999753


No 285
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.95  E-value=1.5e-09  Score=108.08  Aligned_cols=83  Identities=20%  Similarity=0.412  Sum_probs=66.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|||||||++|+|++ |.+||.... .......+..+..+ ..+..+++.+.+||.+||. +|.+|
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~P~~R  268 (280)
T cd05092         191 MPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLS-NTEAIECITQGREL-ERPRTCPPEVYAIMQGCWQREPQQR  268 (280)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCC-HHHHHHHHHcCccC-CCCCCCCHHHHHHHHHHccCChhhC
Confidence            5899887 678999999999999999998 899997654 44555556555433 2345678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       269 p~~~~l~~  276 (280)
T cd05092         269 MVIKDIHS  276 (280)
T ss_pred             CCHHHHHH
Confidence            99999873


No 286
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.95  E-value=1.3e-09  Score=119.57  Aligned_cols=93  Identities=26%  Similarity=0.405  Sum_probs=64.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCC-CCCCC-ch-HHHHHHHHhCC-----CCC------------------
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYP-YSECT-HP-AQIYKKVISGK-----KPE------------------   53 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~P-F~g~s-~~-~qI~~kIlsg~-----~P~------------------   53 (547)
                      ||||++. ..|+.++|||||||++|||++|..+ |.... .. .++.+.+....     .|.                  
T Consensus       335 ~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~  414 (501)
T PHA03210        335 NSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAG  414 (501)
T ss_pred             CCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCc
Confidence            6899988 6799999999999999999998754 43221 12 22222221110     010                  


Q ss_pred             -cc-----ccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 -AL-----FKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 -~l-----~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                       .+     ...++..+.++|.+||. +|.+||++.|+|.||||....
T Consensus       415 ~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        415 HSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             cchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence             00     01245677888999999 799999999999999998653


No 287
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.95  E-value=1.6e-09  Score=109.70  Aligned_cols=84  Identities=21%  Similarity=0.369  Sum_probs=65.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||+|+++|+|++ |..||............+..+.. ...+...++++++|+.+||. +|.+|
T Consensus       210 ~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~R  288 (302)
T cd05055         210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYR-MAQPEHAPAEIYDIMKTCWDADPLKR  288 (302)
T ss_pred             CCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            6899887 678999999999999999998 99999875433334444443332 23344568999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       289 pt~~ell~  296 (302)
T cd05055         289 PTFKQIVQ  296 (302)
T ss_pred             cCHHHHHH
Confidence            99999974


No 288
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.94  E-value=1.5e-09  Score=114.06  Aligned_cols=84  Identities=20%  Similarity=0.354  Sum_probs=67.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++ |..||........+.+.+..+..+ ..+...+.++++|+.+||. +|.+|
T Consensus       283 ~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~R  361 (375)
T cd05104         283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM-LSPECAPSEMYDIMKSCWDADPLKR  361 (375)
T ss_pred             eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC-CCCCCCCHHHHHHHHHHccCChhHC
Confidence            6899987 679999999999999999997 899998755445555555544332 2334568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       362 Ps~~eil~  369 (375)
T cd05104         362 PTFKQIVQ  369 (375)
T ss_pred             cCHHHHHH
Confidence            99999975


No 289
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.94  E-value=1.7e-09  Score=107.65  Aligned_cols=83  Identities=19%  Similarity=0.265  Sum_probs=67.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++ |..||.+.. ..++...+..+..+. .+...+.++.+|+.+||. +|.+|
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R  276 (288)
T cd05050         199 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-HEEVIYYVRDGNVLS-CPDNCPLELYNLMRLCWSKLPSDR  276 (288)
T ss_pred             cCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHcccCcccC
Confidence            5899877 779999999999999999997 888997644 566666666665432 234568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       277 pt~~el~~  284 (288)
T cd05050         277 PSFASINR  284 (288)
T ss_pred             CCHHHHHH
Confidence            99999874


No 290
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.94  E-value=1.8e-09  Score=105.30  Aligned_cols=85  Identities=24%  Similarity=0.376  Sum_probs=66.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC-chHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT-HPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s-~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++|..||.... ....+...+..+..+..+....+..++++|.+||. +|.+|
T Consensus       173 ~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~R  252 (267)
T cd08224         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKR  252 (267)
T ss_pred             cCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccC
Confidence            4899877 678999999999999999999999996532 23345555555555444444678899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       253 p~~~~il~  260 (267)
T cd08224         253 PDISYVLQ  260 (267)
T ss_pred             CCHHHHHH
Confidence            99998863


No 291
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.94  E-value=1.8e-09  Score=105.80  Aligned_cols=83  Identities=23%  Similarity=0.392  Sum_probs=65.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.... ...+...+..+..+ ..+...+..+.+||.+||. +|.+|
T Consensus       180 ~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  257 (269)
T cd05044         180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN-NQEVLQHVTAGGRL-QKPENCPDKIYQLMTNCWAQDPSER  257 (269)
T ss_pred             cCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC-HHHHHHHHhcCCcc-CCcccchHHHHHHHHHHcCCCcccC
Confidence            5899887 678999999999999999998 999998654 44555555444332 2334568899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       258 p~~~~i~~  265 (269)
T cd05044         258 PTFDRIQE  265 (269)
T ss_pred             CCHHHHHH
Confidence            99999864


No 292
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=98.94  E-value=1.6e-09  Score=107.25  Aligned_cols=83  Identities=27%  Similarity=0.351  Sum_probs=67.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|++++ |..||... ++..+...+..+..+. .+..+++++++++.+||. +|++|
T Consensus       186 ~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  263 (280)
T cd05043         186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI-DPFEMAAYLKDGYRLA-QPINCPDELFAVMACCWALDPEER  263 (280)
T ss_pred             cCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC-CHHHHHHHHHcCCCCC-CCCcCCHHHHHHHHHHcCCChhhC
Confidence            6899887 678999999999999999998 99999874 4566666665554322 234568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       264 ps~~~~~~  271 (280)
T cd05043         264 PSFSQLVQ  271 (280)
T ss_pred             CCHHHHHH
Confidence            99999873


No 293
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=98.94  E-value=1.6e-09  Score=106.34  Aligned_cols=84  Identities=20%  Similarity=0.374  Sum_probs=68.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..|+.++||||||+++|+|++ |..||.... ...+...+..+..+. .+...+..+++++.+||. +|.+|
T Consensus       168 ~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~R  245 (256)
T cd05113         168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN-NSETVEKVSQGLRLY-RPHLASEKVYAIMYSCWHEKAEER  245 (256)
T ss_pred             CCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC-HHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHcCCCcccC
Confidence            5799887 678999999999999999998 999998754 455666666654432 234568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       246 p~~~~ll~~  254 (256)
T cd05113         246 PTFQQLLSS  254 (256)
T ss_pred             CCHHHHHHh
Confidence            999999854


No 294
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=98.94  E-value=1.7e-09  Score=106.39  Aligned_cols=83  Identities=25%  Similarity=0.428  Sum_probs=67.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. ...+.+.+..+..+ ..+...+..+.+|+.+||. +|.+|
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  265 (277)
T cd05032         188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-NEEVLKFVIDGGHL-DLPENCPDKLLELMRMCWQYNPKMR  265 (277)
T ss_pred             cCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC-HHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5899887 678999999999999999998 999998754 56666666644433 2344568999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       266 pt~~~l~~  273 (277)
T cd05032         266 PTFLEIVS  273 (277)
T ss_pred             CCHHHHHH
Confidence            99999874


No 295
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.94  E-value=7.6e-10  Score=127.64  Aligned_cols=88  Identities=22%  Similarity=0.240  Sum_probs=65.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..|+.++|||||||++|||++|.+|+...   ......+.....|... ....+....++.+||. +|.+||
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~Rp  257 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK---SRTMSSLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCRP  257 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH---HHHHHHHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhCc
Confidence            7999987 78999999999999999999998887642   2222222222222211 1124567789999999 599999


Q ss_pred             CHHHHhcCCccccC
Q 008997           79 SARELLTDPFLQID   92 (547)
Q Consensus        79 Sa~ELLkHPff~~~   92 (547)
                      ++.++++||||...
T Consensus       258 s~~eil~h~~~~~~  271 (793)
T PLN00181        258 SMSELLQSEFINEP  271 (793)
T ss_pred             ChHHHhhchhhhhh
Confidence            99999999999763


No 296
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.93  E-value=2e-09  Score=105.17  Aligned_cols=83  Identities=20%  Similarity=0.341  Sum_probs=65.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |.+||... ....+...+..+..+. .+...++.+.+++.+||. +|.+|
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~R  246 (262)
T cd05058         169 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-DSFDITVYLLQGRRLL-QPEYCPDPLYEVMLSCWHPKPEMR  246 (262)
T ss_pred             cChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHhcCCCCC-CCCcCCHHHHHHHHHHcCCChhhC
Confidence            6899887 678999999999999999999 56677653 3555666666554432 234568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       247 p~~~~il~  254 (262)
T cd05058         247 PTFSELVS  254 (262)
T ss_pred             CCHHHHHH
Confidence            99999975


No 297
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=98.93  E-value=1.4e-09  Score=108.41  Aligned_cols=84  Identities=26%  Similarity=0.433  Sum_probs=68.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|||||||++|+|++ |..||.+.. ..+++..+..+..+. .+...+..+.+|+.+||. +|.+|
T Consensus       201 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  278 (293)
T cd05053         201 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGYRME-KPQNCTQELYHLMRDCWHEVPSQR  278 (293)
T ss_pred             cCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC-HHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHcccCcccC
Confidence            5899877 678999999999999999997 999998754 556666666554332 334568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      ||+.+++.+
T Consensus       279 ps~~eil~~  287 (293)
T cd05053         279 PTFKQLVED  287 (293)
T ss_pred             cCHHHHHHH
Confidence            999999864


No 298
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.93  E-value=1.9e-09  Score=105.80  Aligned_cols=84  Identities=20%  Similarity=0.383  Sum_probs=66.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +|||++. ..++.++|+||||+++|+|++|.+||.... .......+..+.........+++.+.+||.+||. +|.+||
T Consensus       180 ~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp  258 (269)
T cd08528         180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-MLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARP  258 (269)
T ss_pred             cChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-HHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCC
Confidence            5899887 668899999999999999999999997643 4555555555544333333578999999999999 699999


Q ss_pred             CHHHHhc
Q 008997           79 SARELLT   85 (547)
Q Consensus        79 Sa~ELLk   85 (547)
                      ++.++..
T Consensus       259 ~~~e~~~  265 (269)
T cd08528         259 DIIQVSA  265 (269)
T ss_pred             CHHHHHH
Confidence            9999864


No 299
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.93  E-value=2.2e-09  Score=105.18  Aligned_cols=83  Identities=22%  Similarity=0.333  Sum_probs=65.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |++||.+.. ...+...+..+..+ ..+...+.++++|+.+||. +|.+|
T Consensus       170 ~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05067         170 TAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-NPEVIQNLERGYRM-PRPDNCPEELYELMRLCWKEKPEER  247 (260)
T ss_pred             cCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC-hHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHccCChhhC
Confidence            5889887 678899999999999999998 999998754 45555555444332 2344568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       248 p~~~~l~~  255 (260)
T cd05067         248 PTFEYLRS  255 (260)
T ss_pred             CCHHHHHH
Confidence            99998864


No 300
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.93  E-value=2.1e-09  Score=105.03  Aligned_cols=83  Identities=23%  Similarity=0.362  Sum_probs=67.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||... ...++...+..+..+ ..+...++.+++|+.+||. +|.+|
T Consensus       166 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05082         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKM-DAPDGCPPVVYDVMKQCWHLDAATR  243 (256)
T ss_pred             cCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHhcCChhhC
Confidence            6899887 678999999999999999997 99999864 356666666555333 3445678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       244 pt~~~l~~  251 (256)
T cd05082         244 PSFLQLRE  251 (256)
T ss_pred             cCHHHHHH
Confidence            99999874


No 301
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.93  E-value=2.4e-09  Score=104.88  Aligned_cols=82  Identities=21%  Similarity=0.305  Sum_probs=65.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|+|++ |.+||.+.. ...+...+..+..+ ..+...+..+++|+.+||. +|.+|
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05070         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-NREVLEQVERGYRM-PCPQDCPISLHELMLQCWKKDPEER  247 (260)
T ss_pred             cChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC-CCCCcCCHHHHHHHHHHcccCcccC
Confidence            6899876 678899999999999999999 899998754 44555555544322 2345578899999999999 69999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++.+++
T Consensus       248 pt~~~l~  254 (260)
T cd05070         248 PTFEYLQ  254 (260)
T ss_pred             cCHHHHH
Confidence            9999886


No 302
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.92  E-value=2.3e-09  Score=104.94  Aligned_cols=84  Identities=23%  Similarity=0.451  Sum_probs=67.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..|+.++|+||||+++|+|++ |..||.... ...+...+..+..+ ..+...+.++++++.+||. +|.+|
T Consensus       168 ~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~R  245 (256)
T cd05059         168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS-NSEVVESVSAGYRL-YRPKLAPTEVYTIMYSCWHEKPEDR  245 (256)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHhcCChhhC
Confidence            5899887 678999999999999999998 899998654 45566666555332 2345578999999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++..
T Consensus       246 pt~~~~l~~  254 (256)
T cd05059         246 PAFKKLLSQ  254 (256)
T ss_pred             cCHHHHHHH
Confidence            999999853


No 303
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.92  E-value=2.3e-09  Score=104.62  Aligned_cols=83  Identities=24%  Similarity=0.409  Sum_probs=67.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. ...++..+..+..+ ..+...++.+.+++.+||. +|.+|
T Consensus       171 ~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R  248 (261)
T cd05148         171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-NHEVYDQITAGYRM-PCPAKCPQEIYKIMLECWAAEPEDR  248 (261)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-HHHHHHHHHhCCcC-CCCCCCCHHHHHHHHHHcCCCchhC
Confidence            5799877 678899999999999999998 899998744 55666666654332 2345678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+|++
T Consensus       249 pt~~~l~~  256 (261)
T cd05148         249 PSFKALRE  256 (261)
T ss_pred             cCHHHHHH
Confidence            99999874


No 304
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=98.92  E-value=2.5e-09  Score=105.02  Aligned_cols=83  Identities=19%  Similarity=0.361  Sum_probs=66.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.... ...+...+..+... ......+..+++|+.+||. +|..|
T Consensus       177 ~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~R  254 (268)
T cd05063         177 TAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS-NHEVMKAINDGFRL-PAPMDCPSAVYQLMLQCWQQDRARR  254 (268)
T ss_pred             cCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-HHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5899887 678999999999999999997 999998754 45566666554322 2233468899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       255 p~~~~i~~  262 (268)
T cd05063         255 PRFVDIVN  262 (268)
T ss_pred             cCHHHHHH
Confidence            99999874


No 305
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.91  E-value=3.5e-09  Score=103.72  Aligned_cols=83  Identities=24%  Similarity=0.321  Sum_probs=66.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|+|++ |+.||.+.. ...+...+...... ......+..+++++.+||. +|.+|
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R  248 (261)
T cd05068         171 TAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-NAEVLQQVDQGYRM-PCPPGCPKELYDIMLDCWKEDPDDR  248 (261)
T ss_pred             cCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC-CCCCcCCHHHHHHHHHHhhcCcccC
Confidence            6899887 678999999999999999999 999998754 45566666544322 2334568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       249 p~~~~l~~  256 (261)
T cd05068         249 PTFETLQW  256 (261)
T ss_pred             CCHHHHHH
Confidence            99999863


No 306
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=98.91  E-value=2.8e-09  Score=103.35  Aligned_cols=83  Identities=23%  Similarity=0.353  Sum_probs=66.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. ...+...+..+... ..+..++..+.+|+.+||. +|.+|
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT-NQQAREQVEKGYRM-SCPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcccCcccC
Confidence            5899887 678899999999999999998 999998754 45555555554332 2334578999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       239 p~~~~l~~  246 (250)
T cd05085         239 PKFSELQK  246 (250)
T ss_pred             CCHHHHHH
Confidence            99999875


No 307
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.91  E-value=2.4e-09  Score=111.30  Aligned_cols=91  Identities=22%  Similarity=0.282  Sum_probs=72.9

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCCCCc------------------------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKKPEA------------------------   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~P~~------------------------   54 (547)
                      |||.+.  ..|++.+|+||+|||+.||+++++-|.|.+...|+.+.+.. |.+...                        
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~l  324 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNL  324 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhh
Confidence            899988  67999999999999999999999999998877777654432 211000                        


Q ss_pred             ---cc-cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           55 ---LF-KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        55 ---l~-~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                         +. ..++....+|+.++|. +|.+|.||.+.|+|.||.+.
T Consensus       325 r~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  325 RKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence               00 1145788999999999 79999999999999999975


No 308
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.91  E-value=2.9e-09  Score=103.27  Aligned_cols=83  Identities=24%  Similarity=0.408  Sum_probs=65.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. +.++.++|+||||+++|+|++ |..||.... .......+..+.. ...+...+.++.+|+.+||. +|.+|
T Consensus       162 ~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R  239 (251)
T cd05041         162 TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS-NQQTRERIESGYR-MPAPQLCPEEIYRLMLQCWAYDPENR  239 (251)
T ss_pred             CChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC-HHHHHHHHhcCCC-CCCCccCCHHHHHHHHHHhccChhhC
Confidence            5799877 678999999999999999998 889997754 4444555544322 22344578899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       240 p~~~ell~  247 (251)
T cd05041         240 PSFSEIYN  247 (251)
T ss_pred             cCHHHHHH
Confidence            99999985


No 309
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.91  E-value=1.2e-09  Score=115.53  Aligned_cols=91  Identities=24%  Similarity=0.435  Sum_probs=76.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC-CCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK-PEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~-P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      |||||+. +.|+.|+|+||+|+|+|+|++|++||...+ ..+++..+..+.. ...++...+...++|+...|+ ++..|
T Consensus       181 MAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t-~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~  259 (429)
T KOG0595|consen  181 MAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET-PKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDR  259 (429)
T ss_pred             cCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC-HHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcccc
Confidence            8999997 899999999999999999999999999865 6777777776654 333444567777899988888 59999


Q ss_pred             CCHHHHhcCCccccC
Q 008997           78 LSARELLTDPFLQID   92 (547)
Q Consensus        78 pSa~ELLkHPff~~~   92 (547)
                      .++.+.+.|+|+...
T Consensus       260 ~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  260 ISFEDFFDHPFLAAN  274 (429)
T ss_pred             CchHHhhhhhhcccC
Confidence            999999999998754


No 310
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=98.91  E-value=2.6e-09  Score=103.96  Aligned_cols=83  Identities=22%  Similarity=0.359  Sum_probs=64.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. +.++.++||||||+++|+|++ |..||.... .......+..... ...+...+..+.+|+.+||. +|.+|
T Consensus       163 ~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R  240 (252)
T cd05084         163 TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS-NQQTREAIEQGVR-LPCPELCPDAVYRLMERCWEYDPGQR  240 (252)
T ss_pred             cCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC-HHHHHHHHHcCCC-CCCcccCCHHHHHHHHHHcCCChhhC
Confidence            5899887 678999999999999999997 889997644 3444444444322 23345568999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       241 ps~~~~~~  248 (252)
T cd05084         241 PSFSTVHQ  248 (252)
T ss_pred             cCHHHHHH
Confidence            99999863


No 311
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.91  E-value=2.5e-09  Score=108.29  Aligned_cols=91  Identities=22%  Similarity=0.369  Sum_probs=73.1

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCC--------------------CC----c
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKK--------------------PE----A   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~--------------------P~----~   54 (547)
                      |||.+.  +.|+..+|+||.|||+.||+.|.+-|.|.++.+|+...... |.+                    |.    .
T Consensus       169 APELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~  248 (318)
T KOG0659|consen  169 APELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNN  248 (318)
T ss_pred             ChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccc
Confidence            899988  68999999999999999999999999998877776543322 111                    00    0


Q ss_pred             cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           55 LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        55 l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                      +.+..+..+.+|+.++|. +|.+|+++.|+|+|+||...
T Consensus       249 lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  249 LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence            223457788999999999 79999999999999999864


No 312
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.91  E-value=3.2e-09  Score=104.72  Aligned_cols=85  Identities=21%  Similarity=0.298  Sum_probs=60.7

Q ss_pred             CCcccccc--------cCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCC--C-CccccCCCHHHHHHHH
Q 008997            1 MAPEVYEE--------EYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKK--P-EALFKVEDPEVRQFIE   68 (547)
Q Consensus         1 MAPEVL~~--------~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~--P-~~l~~~~S~elkdLI~   68 (547)
                      ||||++..        .++.++||||||+++|+|++ |..||............+.....  + .......++.+++++.
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (269)
T cd05087         169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQ  248 (269)
T ss_pred             cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHH
Confidence            68998752        35789999999999999996 99999875533322222322222  1 1122245788999999


Q ss_pred             HHhcccCCCCCHHHHhc
Q 008997           69 KCLATVSSRLSARELLT   85 (547)
Q Consensus        69 kCL~dPskRpSa~ELLk   85 (547)
                      +|+.+|.+||++.+|+.
T Consensus       249 ~c~~~P~~Rpt~~~l~~  265 (269)
T cd05087         249 FCWLQPEQRPSAEEVHL  265 (269)
T ss_pred             HHhcCcccCCCHHHHHH
Confidence            99988999999999974


No 313
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.91  E-value=3.4e-10  Score=118.93  Aligned_cols=90  Identities=21%  Similarity=0.392  Sum_probs=67.5

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHH--HHHHHHhCCCCCc------------------------
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQ--IYKKVISGKKPEA------------------------   54 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~q--I~~kIlsg~~P~~------------------------   54 (547)
                      ||||+. -+++..+||||+|||++||.+|...|++..+.++  ++++|+. +.|..                        
T Consensus       277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~  355 (415)
T KOG0671|consen  277 APEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSK  355 (415)
T ss_pred             CchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCcccccc
Confidence            899998 6899999999999999999999999987665443  3333332 22110                        


Q ss_pred             ------------cc---cCCC---HHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           55 ------------LF---KVED---PEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        55 ------------l~---~~~S---~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                                  +.   ...+   .++.+||+++|. +|++|+|+.|+|.||||...
T Consensus       356 ~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  356 GKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             ccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence                        00   0112   246789999999 89999999999999999753


No 314
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.90  E-value=2.2e-09  Score=116.16  Aligned_cols=91  Identities=23%  Similarity=0.276  Sum_probs=72.4

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCCCCc------------------------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKKPEA------------------------   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~P~~------------------------   54 (547)
                      |||+|.  ..|+.++|+||+|||+.||+.|++.|.|.+...|+.....- |.+...                        
T Consensus       287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~  366 (560)
T KOG0600|consen  287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR  366 (560)
T ss_pred             ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence            799988  68999999999999999999999999998776666543321 211100                        


Q ss_pred             -cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           55 -LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        55 -l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                       ..+.+++.+.+|+.++|. +|.+|.||.++|.++||...
T Consensus       367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence             123467888999999999 79999999999999999543


No 315
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.90  E-value=2.5e-09  Score=108.07  Aligned_cols=84  Identities=25%  Similarity=0.406  Sum_probs=67.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|+|++ |..||.+. ....+...+..+..+ ..+...+.++++|+.+||. +|..|
T Consensus       209 ~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  286 (307)
T cd05098         209 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRM-DKPSNCTNELYMMMRDCWHAVPSQR  286 (307)
T ss_pred             eChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCC-CCCCcCCHHHHHHHHHHcccChhhC
Confidence            6899887 678999999999999999998 88999764 355666665554432 3445678999999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       287 ps~~evl~~  295 (307)
T cd05098         287 PTFKQLVED  295 (307)
T ss_pred             cCHHHHHHH
Confidence            999999753


No 316
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=98.90  E-value=5.1e-10  Score=121.88  Aligned_cols=245  Identities=16%  Similarity=0.033  Sum_probs=154.6

Q ss_pred             CcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhC-CCCC---------ccccCCCHHHHHHHHHHhc-ccCCCCC
Q 008997           11 NELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISG-KKPE---------ALFKVEDPEVRQFIEKCLA-TVSSRLS   79 (547)
Q Consensus        11 ~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg-~~P~---------~l~~~~S~elkdLI~kCL~-dPskRpS   79 (547)
                      ++|+|||++|.++.++..|..-+....+... ...+..- ..+.         .+...++.....+..+|+. .|+.||.
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~-l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEY-LEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            4699999999999999988766654432222 2222211 1111         1122356777888899998 4999999


Q ss_pred             HHHHhcCCccccCCCCchhhhhhccccccccCchhhhhhhhhhhhhccCCCCCCCcccccccCCCCCCCCcccccchhhh
Q 008997           80 ARELLTDPFLQIDDYDSDLRMIQYQTDYDEISPLLRQSLYGIYHSNSSSNNGCGHYIGYDTENGLDYHPHEFQESEIDLF  159 (547)
Q Consensus        80 a~ELLkHPff~~~~~~~~l~~l~~~~~~~~~~~l~~~p~~~l~~~f~~lD~d~sG~ls~de~l~~~l~~~e~e~se~el~  159 (547)
                      ..++++++-|.+.-....++................+-....++.|+..     |+-     .+..+.+.|+.+++.++ 
T Consensus       188 ~~~~~k~~i~~ev~~~~t~e~~~~L~~e~~~~~~~~r~~~~s~~lw~~~-----g~~-----~e~~Ll~k~ii~s~~pi-  256 (725)
T KOG1093|consen  188 PMELSKRCSFTEVYKDLTVEMRAALRKEVANNDLFERLVENSYYLWKLA-----GGD-----PEIELLKKGIIRSHAPI-  256 (725)
T ss_pred             hhHHhcCccHHHHHhhhhHHHHHhhcccccccHHHHHHHHHHHHHHHHh-----CCc-----hhHHHHHhhcccccCcc-
Confidence            9999999998765221111111111111112222222267777788762     221     12233334444444333 


Q ss_pred             ccccccccccccccccCc----------cccccceEEEeeec-ccccCc-ccccccccCCCCcHHHHHHHHHHccCCCcc
Q 008997          160 TCQEDEHLTNFDISIKGK----------RREDDGIFLRLRIA-DKEGRI-RNIYFPFDIQTDTALSVATEMVSELDITDQ  227 (547)
Q Consensus       160 ~~~e~~~s~~~di~l~G~----------~~dd~~v~L~LRi~-dk~g~l-r~i~fpFd~d~DTa~svA~EMV~Eldi~~q  227 (547)
                            .+.|+.....|.          +.+++.+.|.+... .+ ..+ ..+++|+... |.+.+..--++|+.+++||
T Consensus       257 ------ss~p~~~~~~~~s~~~g~d~~~~~d~~v~~l~~k~~~~r-K~~~~~~~~~L~~~-~~~~e~~~l~~r~~~~e~q  328 (725)
T KOG1093|consen  257 ------SSLPTVRFDDGLSLDSGRDSQSLFDDGVVDLPLKKLLTR-KETGQRVSAPLLHK-IGILELLPLLIREKDYEYQ  328 (725)
T ss_pred             ------cCCCccchhhhhhhcCCCchhhhhhhhhhccccCCCCCc-cccccccccccccc-hhhccchhHHHhhhhhhhh
Confidence                  234443333332          36788888888766 44 444 5678887543 3343333347899999999


Q ss_pred             c-----------HHHHHHHHHHHHHhhCCCCCCCCccccCCCCcccccCC-CCCCChhhhhcc
Q 008997          228 D-----------VTKIAEIIDSEIASLVPEWKRGMAMEESPHRSSFCHNC-ASNGCLPDYILS  278 (547)
Q Consensus       228 d-----------~~~IaemI~~Ei~~~VP~w~rg~~wa~~~~ll~v~~n~-~~~~~~~~~~~~  278 (547)
                      .           |++.+..|+.|++.+|||..||.+|+   +||++..|. +.+-.|+.++|.
T Consensus       329 ~n~~~~d~Ll~g~~~k~~qI~r~a~vdvpp~~R~~iW~---aLL~l~e~~~a~y~~IDk~Ts~  388 (725)
T KOG1093|consen  329 SNMLLFDRLLDGYPKKRLQILREAYVDVPPLYRGFIWA---ALLQLEENHTAFYTLIDKGTSH  388 (725)
T ss_pred             hhHHHHHHhhccchHHHHHHHHHhccCCChhHhHHHHH---HHhcCccccchhhhhhhcCCCC
Confidence            6           99999999999999999999999999   999998885 457888888863


No 317
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.90  E-value=3.1e-09  Score=104.66  Aligned_cols=83  Identities=18%  Similarity=0.350  Sum_probs=67.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. +.++.++||||||+++|+|++ |..||.... ...+...+..+..+ ..+...++++++||.+||. +|.+|
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~c~~~~~~~R  242 (257)
T cd05115         165 YAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK-GPEVMSFIEQGKRL-DCPAECPPEMYALMKDCWIYKWEDR  242 (257)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC-HHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899877 678999999999999999996 999998754 45566666665543 3445678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       243 p~~~~i~~  250 (257)
T cd05115         243 PNFAKVEE  250 (257)
T ss_pred             cCHHHHHH
Confidence            99998864


No 318
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.89  E-value=2.9e-09  Score=103.58  Aligned_cols=84  Identities=21%  Similarity=0.424  Sum_probs=66.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. +.++.++|+||||+++|+|++ |..||.... ...+...+..+..+ ..+...+..+.+|+.+||. +|.+|
T Consensus       168 ~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~R  245 (256)
T cd05112         168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-NSEVVETINAGFRL-YKPRLASQSVYELMQHCWKERPEDR  245 (256)
T ss_pred             cCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-HHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHcccChhhC
Confidence            5899887 678899999999999999998 999998643 45566666554332 1234468899999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.++++.
T Consensus       246 p~~~~~l~~  254 (256)
T cd05112         246 PSFSLLLHQ  254 (256)
T ss_pred             CCHHHHHHh
Confidence            999999853


No 319
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.89  E-value=3.7e-09  Score=104.09  Aligned_cols=83  Identities=23%  Similarity=0.445  Sum_probs=66.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. .......+..+..+ ..+...+..+++|+.+||. +|.+|
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R  252 (270)
T cd05056         175 MAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK-NNDVIGRIENGERL-PMPPNCPPTLYSLMTKCWAYDPSKR  252 (270)
T ss_pred             cChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            5899887 678999999999999999986 999998755 34455556555443 2345678999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       253 pt~~~~~~  260 (270)
T cd05056         253 PRFTELKA  260 (270)
T ss_pred             cCHHHHHH
Confidence            99999874


No 320
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.89  E-value=3.3e-09  Score=107.64  Aligned_cols=83  Identities=23%  Similarity=0.398  Sum_probs=67.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++|+|++ |..||.+.. ...++..+..+..+ ..+..++.++++|+.+||. +|.+|
T Consensus       203 ~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~R  280 (314)
T cd05099         203 MAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-VEELFKLLREGHRM-DKPSNCTHELYMLMRECWHAVPTQR  280 (314)
T ss_pred             cCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCCcccC
Confidence            6899887 678999999999999999998 899998743 56666666655432 2334568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       281 ps~~~ll~  288 (314)
T cd05099         281 PTFKQLVE  288 (314)
T ss_pred             cCHHHHHH
Confidence            99999874


No 321
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.89  E-value=2.9e-09  Score=105.24  Aligned_cols=83  Identities=28%  Similarity=0.399  Sum_probs=66.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|+|++ |..||.+.. ....+..+..+... ..+...+.++.+|+.+||. +|.+|
T Consensus       178 ~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  255 (270)
T cd05047         178 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-CAELYEKLPQGYRL-EKPLNCDDEVYDLMRQCWREKPYER  255 (270)
T ss_pred             CChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-HHHHHHHHhCCCCC-CCCCcCCHHHHHHHHHHcccChhhC
Confidence            5899887 678999999999999999996 999997643 45556655554332 2334568899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       256 ps~~~il~  263 (270)
T cd05047         256 PSFAQILV  263 (270)
T ss_pred             CCHHHHHH
Confidence            99999874


No 322
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.89  E-value=3.4e-09  Score=104.00  Aligned_cols=83  Identities=19%  Similarity=0.311  Sum_probs=65.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.+.. .......+..+..+ ..+...+..+++|+.+||. +|.+|
T Consensus       170 ~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05069         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV-NREVLEQVERGYRM-PCPQGCPESLHELMKLCWKKDPDER  247 (260)
T ss_pred             CCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCC-CCCcccCHHHHHHHHHHccCCcccC
Confidence            5889876 678899999999999999999 999998754 44555555544322 2345578899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       248 p~~~~i~~  255 (260)
T cd05069         248 PTFEYIQS  255 (260)
T ss_pred             cCHHHHHH
Confidence            99998863


No 323
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.89  E-value=3.5e-09  Score=104.05  Aligned_cols=84  Identities=19%  Similarity=0.360  Sum_probs=67.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||.+. ..++.++||||||+++|+|++ |..||.... ...+...+..+... ..+...++.+.+|+.+||. +|.+|
T Consensus       175 ~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~R  252 (266)
T cd05033         175 TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-NQDVIKAVEDGYRL-PPPMDCPSALYQLMLDCWQKDRNER  252 (266)
T ss_pred             cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5899887 678999999999999999997 999998754 45566666554332 2234578999999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++++
T Consensus       253 p~~~ei~~~  261 (266)
T cd05033         253 PTFSQIVST  261 (266)
T ss_pred             cCHHHHHHH
Confidence            999999754


No 324
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.89  E-value=3.8e-09  Score=105.27  Aligned_cols=83  Identities=23%  Similarity=0.364  Sum_probs=65.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++|||++ |..||.+.. ...+...+..+..+. .+...+..+..++.+||. +|.+|
T Consensus       178 ~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~c~~~~p~~R  255 (279)
T cd05111         178 MALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR-PHEVPDLLEKGERLA-QPQICTIDVYMVMVKCWMIDENVR  255 (279)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHCCCcCC-CCCCCCHHHHHHHHHHcCCCcccC
Confidence            6899887 679999999999999999998 999998743 444555455444332 234567889999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       256 ps~~el~~  263 (279)
T cd05111         256 PTFKELAN  263 (279)
T ss_pred             cCHHHHHH
Confidence            99999865


No 325
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.88  E-value=3.7e-09  Score=105.58  Aligned_cols=83  Identities=22%  Similarity=0.351  Sum_probs=66.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.+.. +..+...+..+..+ ..+..++.++++|+.+||. +|.+|
T Consensus       196 ~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~cl~~~P~~R  273 (290)
T cd05045         196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA-PERLFNLLKTGYRM-ERPENCSEEMYNLMLTCWKQEPDKR  273 (290)
T ss_pred             cCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHccCCcccC
Confidence            5889876 668899999999999999998 999998743 56666665544332 2345578999999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       274 p~~~~i~~  281 (290)
T cd05045         274 PTFADISK  281 (290)
T ss_pred             CCHHHHHH
Confidence            99999864


No 326
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=98.88  E-value=3.5e-09  Score=103.98  Aligned_cols=82  Identities=23%  Similarity=0.372  Sum_probs=60.2

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhC-CCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTF-DYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG-~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.  ..++.++||||||+++|+|++| .+||.... ...... +.....  .++...+.++.+|+.+||. +|.+
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~-~~~~~~-~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~  246 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD-SQKKLQ-FYEDRH--QLPAPKWTELANLINQCMDYEPDF  246 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc-HHHHHH-HHHccc--cCCCCCcHHHHHHHHHHhccChhh
Confidence            6899987  4588999999999999999998 46666533 222222 222211  2233456889999999999 6999


Q ss_pred             CCCHHHHhcC
Q 008997           77 RLSARELLTD   86 (547)
Q Consensus        77 RpSa~ELLkH   86 (547)
                      ||+++++++.
T Consensus       247 Rps~~~il~~  256 (258)
T cd05078         247 RPSFRAIIRD  256 (258)
T ss_pred             CCCHHHHHHh
Confidence            9999999863


No 327
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.87  E-value=4.4e-09  Score=104.24  Aligned_cols=83  Identities=23%  Similarity=0.344  Sum_probs=66.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |..||.... ...+...+..+..+ ..+...++.+.+++.+||. +|.+|
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R  255 (279)
T cd05109         178 MALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP-AREIPDLLEKGERL-PQPPICTIDVYMIMVKCWMIDSECR  255 (279)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHCCCcC-CCCccCCHHHHHHHHHHcCCChhhC
Confidence            6899887 679999999999999999998 899997643 44555555554433 2345578999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       256 p~~~~l~~  263 (279)
T cd05109         256 PRFRELVD  263 (279)
T ss_pred             cCHHHHHH
Confidence            99999984


No 328
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.87  E-value=3e-09  Score=107.57  Aligned_cols=84  Identities=27%  Similarity=0.396  Sum_probs=66.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.+.. .......+..+..+ ..+..+++.+.+|+.+||. +|.+|
T Consensus       190 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  267 (303)
T cd05088         190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-CAELYEKLPQGYRL-EKPLNCDDEVYDLMRQCWREKPYER  267 (303)
T ss_pred             cCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC-hHHHHHHHhcCCcC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899877 568899999999999999998 999998643 45555555443222 2334468899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       268 p~~~~il~~  276 (303)
T cd05088         268 PSFAQILVS  276 (303)
T ss_pred             cCHHHHHHH
Confidence            999999865


No 329
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.87  E-value=3.7e-09  Score=107.42  Aligned_cols=84  Identities=25%  Similarity=0.379  Sum_probs=66.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |..||.+.. ..++...+..+..+ ..+...+..+.+++.+||. +|.+|
T Consensus       178 ~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~R  255 (316)
T cd05108         178 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-ASEISSILEKGERL-PQPPICTIDVYMIMVKCWMIDADSR  255 (316)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHccCChhhC
Confidence            6899887 779999999999999999997 999998743 44555444433332 2334568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       256 ps~~~l~~~  264 (316)
T cd05108         256 PKFRELIIE  264 (316)
T ss_pred             cCHHHHHHH
Confidence            999999875


No 330
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.87  E-value=5.1e-09  Score=103.19  Aligned_cols=85  Identities=21%  Similarity=0.434  Sum_probs=67.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.... ...++..+..+..+......++..+++++.+||. +|.+|
T Consensus       185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R  263 (275)
T cd05046         185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS-DEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDR  263 (275)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-hHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccC
Confidence            5899876 668889999999999999998 888997643 4555666655554433445578999999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++..
T Consensus       264 p~~~~~l~~  272 (275)
T cd05046         264 PSFSELVSA  272 (275)
T ss_pred             CCHHHHHHH
Confidence            999999853


No 331
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.86  E-value=5.4e-09  Score=105.28  Aligned_cols=84  Identities=25%  Similarity=0.403  Sum_probs=68.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++|+|++ |..||.+.. ...+...+..+... ..+...+..+++|+.+||. +|.+|
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~R  283 (304)
T cd05101         206 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-VEELFKLLKEGHRM-DKPANCTNELYMMMRDCWHAIPSHR  283 (304)
T ss_pred             eCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-HHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcccChhhC
Confidence            6899887 679999999999999999998 788998754 56777766655432 2344578999999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.++++.
T Consensus       284 ps~~e~l~~  292 (304)
T cd05101         284 PTFKQLVED  292 (304)
T ss_pred             CCHHHHHHH
Confidence            999999854


No 332
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.85  E-value=5.7e-09  Score=102.85  Aligned_cols=83  Identities=19%  Similarity=0.285  Sum_probs=65.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|+|++ |..||.+.. ...+...+..+... ......+..+.+|+.+||. +|.+|
T Consensus       170 ~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~R  247 (262)
T cd05071         170 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVERGYRM-PCPPECPESLHDLMCQCWRKEPEER  247 (262)
T ss_pred             cCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-hHHHHHHHhcCCCC-CCccccCHHHHHHHHHHccCCcccC
Confidence            6899876 678999999999999999999 888998754 45556555544322 2234578899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       248 p~~~~~~~  255 (262)
T cd05071         248 PTFEYLQA  255 (262)
T ss_pred             CCHHHHHH
Confidence            99998863


No 333
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.85  E-value=5.6e-09  Score=104.02  Aligned_cols=84  Identities=19%  Similarity=0.239  Sum_probs=63.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh--CCCCCCCCCchHHHHHHHHhC----C--CCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT--FDYPYSECTHPAQIYKKVISG----K--KPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt--G~~PF~g~s~~~qI~~kIlsg----~--~P~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||++. ..++.++||||||+++|+|++  |..||.... ...++..+...    .  .....+...+.++.+|+.+||
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  277 (296)
T cd05051         199 MAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-DQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECW  277 (296)
T ss_pred             cCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC-hHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHh
Confidence            6899887 679999999999999999998  778887644 44455444332    1  111123345789999999999


Q ss_pred             c-ccCCCCCHHHHhc
Q 008997           72 A-TVSSRLSARELLT   85 (547)
Q Consensus        72 ~-dPskRpSa~ELLk   85 (547)
                      . +|.+||++.++++
T Consensus       278 ~~~p~~Rpt~~el~~  292 (296)
T cd05051         278 RRDEEDRPTFREIHL  292 (296)
T ss_pred             ccChhcCCCHHHHHH
Confidence            9 6999999999964


No 334
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.85  E-value=6.6e-09  Score=100.36  Aligned_cols=83  Identities=24%  Similarity=0.426  Sum_probs=67.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||.+. ..++.++|+||+|+++|+|++ |.+||... ....++..+..+..+. .+...+.++.+++.+||. +|.+|
T Consensus       171 ~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~R  248 (258)
T smart00219      171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-SNEEVLEYLKKGYRLP-KPENCPPEIYKLMLQCWAEDPEDR  248 (258)
T ss_pred             cChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHhcCCCCC-CCCcCCHHHHHHHHHHCcCChhhC
Confidence            5889876 678899999999999999998 88888764 3566677776665543 334578999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       249 pt~~~ll~  256 (258)
T smart00219      249 PTFSELVE  256 (258)
T ss_pred             cCHHHHHh
Confidence            99999875


No 335
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.85  E-value=1.3e-09  Score=120.17  Aligned_cols=95  Identities=29%  Similarity=0.410  Sum_probs=74.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC--CccccCCCHHHHHHHHHHhcccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP--EALFKVEDPEVRQFIEKCLATVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P--~~l~~~~S~elkdLI~kCL~dPskR   77 (547)
                      |||||+. .+|+..||+||.|||||||+.|++||...+ +.+.-.+|.....-  ......+++++.+||.++...++.|
T Consensus       838 iapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t-p~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~R  916 (1034)
T KOG0608|consen  838 IAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT-PGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSR  916 (1034)
T ss_pred             cChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC-CCcceeeeeehhhccccccccccCHHHHHHHHHHhcChhhh
Confidence            6999998 789999999999999999999999998754 44443444433221  1122357999999999999988888


Q ss_pred             CC---HHHHhcCCccccCCCCc
Q 008997           78 LS---ARELLTDPFLQIDDYDS   96 (547)
Q Consensus        78 pS---a~ELLkHPff~~~~~~~   96 (547)
                      +.   +.++..||||+..++..
T Consensus       917 LGkng~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  917 LGKNGADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             hcccchhhhhcCccccccchHh
Confidence            74   78899999999987654


No 336
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=98.85  E-value=6.8e-09  Score=101.22  Aligned_cols=83  Identities=22%  Similarity=0.387  Sum_probs=66.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++ |..||.... ...+...+..+..+ ..+...++.+.+||.+||. +|.+|
T Consensus       166 ~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05039         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPHVEKGYRM-EAPEGCPPEVYKVMKDCWELDPAKR  243 (256)
T ss_pred             cCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhcCCCC-CCccCCCHHHHHHHHHHhccChhhC
Confidence            5899887 678889999999999999997 999998743 45555555544332 2344578999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       244 p~~~~l~~  251 (256)
T cd05039         244 PTFKQLRE  251 (256)
T ss_pred             cCHHHHHH
Confidence            99999874


No 337
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.85  E-value=5.1e-09  Score=107.38  Aligned_cols=84  Identities=25%  Similarity=0.407  Sum_probs=68.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++|+|++ |..||.+.. ...++..+..+..+ ..+...+.++.+|+.+||. +|.+|
T Consensus       203 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~R  280 (334)
T cd05100         203 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRM-DKPANCTHELYMIMRECWHAVPSQR  280 (334)
T ss_pred             cCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcccChhhC
Confidence            6899987 678999999999999999998 889998754 56666666555432 2334568899999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++.+
T Consensus       281 ps~~ell~~  289 (334)
T cd05100         281 PTFKQLVED  289 (334)
T ss_pred             cCHHHHHHH
Confidence            999999865


No 338
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.84  E-value=1.4e-09  Score=119.54  Aligned_cols=84  Identities=26%  Similarity=0.390  Sum_probs=71.2

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCC---CccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKP---EALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P---~~l~~~~S~elkdLI~kCL~-   72 (547)
                      |||||++    ..|++.+|||||||++|||++|..||. ..+..+|+-.|..|...   .......+.++++|+..||. 
T Consensus       557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~  635 (678)
T KOG0193|consen  557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKF  635 (678)
T ss_pred             hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhc
Confidence            8999997    479999999999999999999999999 46788888888888542   22334467799999999999 


Q ss_pred             ccCCCCCHHHHhc
Q 008997           73 TVSSRLSARELLT   85 (547)
Q Consensus        73 dPskRpSa~ELLk   85 (547)
                      ++..||.+.+||.
T Consensus       636 ~~~eRP~F~~il~  648 (678)
T KOG0193|consen  636 DREERPLFPQLLS  648 (678)
T ss_pred             CcccCccHHHHHH
Confidence            6999999999874


No 339
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.84  E-value=7.6e-09  Score=101.49  Aligned_cols=82  Identities=20%  Similarity=0.347  Sum_probs=65.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|++++ |..||.+.. ...+...+..+.. .......+.++.+++.+||. +|.+|
T Consensus       170 ~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R  247 (260)
T cd05073         170 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-NPEVIRALERGYR-MPRPENCPEELYNIMMRCWKNRPEER  247 (260)
T ss_pred             cCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCC-CCCcccCCHHHHHHHHHHcccCcccC
Confidence            5899887 678889999999999999998 999998754 4455555554432 22335678899999999999 69999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++.+++
T Consensus       248 p~~~~l~  254 (260)
T cd05073         248 PTFEYIQ  254 (260)
T ss_pred             cCHHHHH
Confidence            9998876


No 340
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.83  E-value=7.4e-09  Score=101.03  Aligned_cols=82  Identities=23%  Similarity=0.329  Sum_probs=65.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||+|+++|+|++ |+.||.+.. .......+..+... ..+...+.++++++.+||. +|.+|
T Consensus       171 ~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R  248 (261)
T cd05034         171 TAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-NREVLEQVERGYRM-PRPPNCPEELYDLMLQCWDKDPEER  248 (261)
T ss_pred             cCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcccCcccC
Confidence            5799887 678899999999999999998 999998754 45556666554322 2234458899999999999 59999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++++++
T Consensus       249 p~~~~l~  255 (261)
T cd05034         249 PTFEYLQ  255 (261)
T ss_pred             CCHHHHH
Confidence            9999886


No 341
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.83  E-value=6.1e-09  Score=117.40  Aligned_cols=83  Identities=22%  Similarity=0.364  Sum_probs=71.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||.+. ..|+.++|||||||++||+++ |..||.+......+++.+..|.... .|..+++++.++++.||. +|.+|
T Consensus       488 mApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~-~P~~c~~eiY~iM~~CW~~~p~~R  566 (609)
T KOG0200|consen  488 MAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRME-QPEHCSDEIYDLMKSCWNADPEDR  566 (609)
T ss_pred             cCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHhCCCcccC
Confidence            8999998 689999999999999999997 8999998654667788888887754 345569999999999999 69999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |++.++.
T Consensus       567 P~F~~~~  573 (609)
T KOG0200|consen  567 PTFSECV  573 (609)
T ss_pred             CCHHHHH
Confidence            9999886


No 342
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.83  E-value=6.9e-09  Score=101.26  Aligned_cols=83  Identities=20%  Similarity=0.334  Sum_probs=66.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++|+||||+++|+|++ |.+||.... .......+..+..+. ....+++.+++|+.+||. +|..|
T Consensus       164 ~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R  241 (254)
T cd05083         164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-LKEVKECVEKGYRME-PPEGCPADVYVLMTSCWETEPKKR  241 (254)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-HHHHHHHHhCCCCCC-CCCcCCHHHHHHHHHHcCCChhhC
Confidence            5899877 678999999999999999997 999998754 455555565554332 345578999999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       242 p~~~~l~~  249 (254)
T cd05083         242 PSFHKLRE  249 (254)
T ss_pred             cCHHHHHH
Confidence            99999874


No 343
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.82  E-value=7.3e-09  Score=104.32  Aligned_cols=83  Identities=18%  Similarity=0.259  Sum_probs=61.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh--CCCCCCCCCchHHHHHHHHh---C---CCCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT--FDYPYSECTHPAQIYKKVIS---G---KKPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt--G~~PF~g~s~~~qI~~kIls---g---~~P~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||++. +.|+.++||||||+++|+|++  +..||.+.. ..++...+..   .   ......+..++..+++|+.+||
T Consensus       207 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  285 (304)
T cd05096         207 MAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT-DEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCW  285 (304)
T ss_pred             cCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC-HHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHc
Confidence            6899987 779999999999999999986  567887654 3343333221   1   1111123456889999999999


Q ss_pred             c-ccCCCCCHHHHh
Q 008997           72 A-TVSSRLSARELL   84 (547)
Q Consensus        72 ~-dPskRpSa~ELL   84 (547)
                      . +|.+||++.++.
T Consensus       286 ~~~p~~RPs~~~i~  299 (304)
T cd05096         286 SRDCRERPSFSDIH  299 (304)
T ss_pred             cCCchhCcCHHHHH
Confidence            9 699999999984


No 344
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.82  E-value=5.6e-09  Score=121.87  Aligned_cols=83  Identities=20%  Similarity=0.366  Sum_probs=69.4

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||.+. +.|+.++|||||||++||+++ |..||.+..+ .+++.-++.+.. -..+..++..+.++|..||. +|.+|
T Consensus       871 m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-~~v~~~~~~ggR-L~~P~~CP~~ly~lM~~CW~~~pe~R  948 (1025)
T KOG1095|consen  871 MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-FEVLLDVLEGGR-LDPPSYCPEKLYQLMLQCWKHDPEDR  948 (1025)
T ss_pred             CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-HHHHHHHHhCCc-cCCCCCCChHHHHHHHHHccCChhhC
Confidence            8999999 889999999999999999997 8999998764 555554554442 12356688999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++..|++
T Consensus       949 P~F~~i~~  956 (1025)
T KOG1095|consen  949 PSFRTIVE  956 (1025)
T ss_pred             ccHHHHHh
Confidence            99999986


No 345
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.82  E-value=8.3e-09  Score=101.62  Aligned_cols=83  Identities=18%  Similarity=0.369  Sum_probs=66.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++|+||||+++|++++ |..||.+.. ..++...+..+..+ ..+..+++.+++|+.+||. +|.+|
T Consensus       176 ~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R  253 (267)
T cd05066         176 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS-NQDVIKAIEEGYRL-PAPMDCPAALHQLMLDCWQKDRNER  253 (267)
T ss_pred             cCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC-HHHHHHHHhCCCcC-CCCCCCCHHHHHHHHHHcccCchhC
Confidence            5899887 678999999999999999886 999998754 45566666655332 2234568899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++++
T Consensus       254 p~~~~i~~  261 (267)
T cd05066         254 PKFEQIVS  261 (267)
T ss_pred             CCHHHHHH
Confidence            99999864


No 346
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.82  E-value=4.6e-09  Score=105.95  Aligned_cols=82  Identities=18%  Similarity=0.291  Sum_probs=62.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHH--------HHHHhCCCCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIY--------KKVISGKKPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~--------~kIlsg~~P~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||++. ..|+.++|||||||++|||++|.+||.+......+.        ..+..+..   ..+..++.+.+++..|+
T Consensus       200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  276 (294)
T PHA02882        200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVT  276 (294)
T ss_pred             cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHH
Confidence            6888877 679999999999999999999999998763322222        22222222   22345789999999999


Q ss_pred             c-ccCCCCCHHHHhc
Q 008997           72 A-TVSSRLSARELLT   85 (547)
Q Consensus        72 ~-dPskRpSa~ELLk   85 (547)
                      . +|.+||++.++++
T Consensus       277 ~~~~~~rp~~~~l~~  291 (294)
T PHA02882        277 KLSYEEKPDYDALIK  291 (294)
T ss_pred             hCCCCCCCCHHHHHH
Confidence            9 6999999999874


No 347
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.82  E-value=7.5e-09  Score=101.85  Aligned_cols=83  Identities=14%  Similarity=0.306  Sum_probs=65.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||++. ..++.++||||||+++|||++ |..||.... ...+...+.... +...+...+..+.+++.+||. +|.+|
T Consensus       178 ~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~-~~~~~~~i~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R  255 (269)
T cd05065         178 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS-NQDVINAIEQDY-RLPPPMDCPTALHQLMLDCWQKDRNAR  255 (269)
T ss_pred             cCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC-HHHHHHHHHcCC-cCCCcccCCHHHHHHHHHHcCCChhhC
Confidence            5899887 678999999999999999886 999998754 455666664432 222334568899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       256 p~~~~i~~  263 (269)
T cd05065         256 PKFGQIVS  263 (269)
T ss_pred             cCHHHHHH
Confidence            99999874


No 348
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.81  E-value=8.7e-09  Score=101.40  Aligned_cols=85  Identities=21%  Similarity=0.318  Sum_probs=61.9

Q ss_pred             CCccccc--------ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCC---CccccCCCHHHHHHHH
Q 008997            1 MAPEVYE--------EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKP---EALFKVEDPEVRQFIE   68 (547)
Q Consensus         1 MAPEVL~--------~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P---~~l~~~~S~elkdLI~   68 (547)
                      +|||++.        ..++.++|||||||++|+|++ |..||....+...+...+..+..+   .......++..++++.
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (269)
T cd05042         169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQ  248 (269)
T ss_pred             cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHH
Confidence            5899864        246789999999999999998 788998755333333333333221   1123356888999999


Q ss_pred             HHhcccCCCCCHHHHhc
Q 008997           69 KCLATVSSRLSARELLT   85 (547)
Q Consensus        69 kCL~dPskRpSa~ELLk   85 (547)
                      .|+.+|.+||++++++.
T Consensus       249 ~~~~dp~~Rpt~~~v~~  265 (269)
T cd05042         249 FCWLDPETRPTAEEVHE  265 (269)
T ss_pred             HHhcCcccccCHHHHHH
Confidence            99989999999999874


No 349
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.80  E-value=6.7e-09  Score=102.73  Aligned_cols=82  Identities=23%  Similarity=0.375  Sum_probs=60.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHH-hCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMV-TFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELL-tG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.  ..|+.++|||||||++|+|+ .|..||.... ..... ....+...  .....++++++||.+||. +|.+
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-~~~~~-~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~  250 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT-LAEKE-RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQ  250 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc-hhHHH-HHHhcCcc--CCCCChHHHHHHHHHHcCCChhh
Confidence            6899886  56889999999999999998 5888887643 22222 22222221  122346789999999999 6999


Q ss_pred             CCCHHHHhcC
Q 008997           77 RLSARELLTD   86 (547)
Q Consensus        77 RpSa~ELLkH   86 (547)
                      ||++.+|+.+
T Consensus       251 Rp~~~~il~~  260 (262)
T cd05077         251 RPFFRAIMRD  260 (262)
T ss_pred             CcCHHHHHHh
Confidence            9999999864


No 350
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.79  E-value=8.5e-09  Score=106.59  Aligned_cols=85  Identities=25%  Similarity=0.392  Sum_probs=66.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++||||||+++|+|++ |..||........+...+..+..+. .+...++++.+++.+||. +|.+|
T Consensus       248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~cl~~~p~~R  326 (343)
T cd05103         248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-APDYTTPEMYQTMLDCWHGEPSQR  326 (343)
T ss_pred             ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC-CCCCCCHHHHHHHHHHccCChhhC
Confidence            5899887 678999999999999999996 9999987543344444444444322 234468899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.++++|
T Consensus       327 ps~~eil~~  335 (343)
T cd05103         327 PTFSELVEH  335 (343)
T ss_pred             cCHHHHHHH
Confidence            999999875


No 351
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.79  E-value=1.2e-08  Score=101.48  Aligned_cols=84  Identities=19%  Similarity=0.272  Sum_probs=60.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchH--------------HHHHHHHhCCCCCccccCCCHHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPA--------------QIYKKVISGKKPEALFKVEDPEVRQ   65 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~--------------qI~~kIlsg~~P~~l~~~~S~elkd   65 (547)
                      ||||++. ..++.++||||||+++|+|++|..||.......              .+...+..+.. ...+...+.++++
T Consensus       177 ~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  255 (283)
T cd05080         177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR-LPCPKNCPQEVYI  255 (283)
T ss_pred             eCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC-CCCCCCCCHHHHH
Confidence            5899887 678999999999999999999999986422110              00111111111 1123456789999


Q ss_pred             HHHHHhc-ccCCCCCHHHHhc
Q 008997           66 FIEKCLA-TVSSRLSARELLT   85 (547)
Q Consensus        66 LI~kCL~-dPskRpSa~ELLk   85 (547)
                      |+.+||. +|+.||++.+++.
T Consensus       256 li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         256 LMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHhccChhhCCCHHHHHH
Confidence            9999999 6999999999874


No 352
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.78  E-value=9.5e-09  Score=114.91  Aligned_cols=83  Identities=16%  Similarity=0.289  Sum_probs=55.1

Q ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCC-------------c------cccCCCHHHHHHHHHH
Q 008997           10 YNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPE-------------A------LFKVEDPEVRQFIEKC   70 (547)
Q Consensus        10 Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~-------------~------l~~~~S~elkdLI~kC   70 (547)
                      |+.++|||||||++|||+++..|+..  ...+....+.......             .      .....+...++||.+|
T Consensus       356 ~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~m  433 (566)
T PLN03225        356 LPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSM  433 (566)
T ss_pred             CCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHH
Confidence            45677999999999999987665442  2223222222211100             0      0011133456899999


Q ss_pred             hc-ccCCCCCHHHHhcCCccccCCC
Q 008997           71 LA-TVSSRLSARELLTDPFLQIDDY   94 (547)
Q Consensus        71 L~-dPskRpSa~ELLkHPff~~~~~   94 (547)
                      |. +|.+|||+.++|+||||+....
T Consensus       434 L~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        434 MRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             ccCCcccCCCHHHHhCCcCcCCCCc
Confidence            99 6999999999999999987654


No 353
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.78  E-value=1.4e-08  Score=105.64  Aligned_cols=92  Identities=28%  Similarity=0.396  Sum_probs=71.2

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CCC-----C-----------Cccc------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GKK-----P-----------EALF------   56 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~~-----P-----------~~l~------   56 (547)
                      |||++.  ..|+..+||||+|||++||+++++-|.+.+...++...... |.+     |           ...+      
T Consensus       188 aPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l  267 (323)
T KOG0594|consen  188 APEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDL  267 (323)
T ss_pred             CHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccch
Confidence            899988  47999999999999999999999999998766665543321 111     0           0001      


Q ss_pred             ----cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           57 ----KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        57 ----~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                          +..++...+++.+||+ +|.+|.|++.+|.||||....
T Consensus       268 ~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  268 SSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             HHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence                1234588999999999 799999999999999998763


No 354
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.78  E-value=1.4e-08  Score=100.68  Aligned_cols=83  Identities=24%  Similarity=0.358  Sum_probs=67.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||.+. ..++.++|+||||+++||+++ |..||.+.. ..++...+..+... ..+...+..+.+++.+||. +|..|
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~R  255 (279)
T cd05057         178 MALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-AVEIPDLLEKGERL-PQPPICTIDVYMVLVKCWMIDAESR  255 (279)
T ss_pred             cCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-HHHHHHHHhCCCCC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899877 678899999999999999998 999998754 56677777665432 2334568899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       256 p~~~~l~~  263 (279)
T cd05057         256 PTFKELIN  263 (279)
T ss_pred             CCHHHHHH
Confidence            99998863


No 355
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.78  E-value=1e-08  Score=109.61  Aligned_cols=84  Identities=29%  Similarity=0.402  Sum_probs=66.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..|+.++|||||||++|+|++ |..||........++..+..+..+ ..+..++..+++|+.+||. +|.+|
T Consensus       306 ~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~R  384 (400)
T cd05105         306 MAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM-AKPDHATQEVYDIMVKCWNSEPEKR  384 (400)
T ss_pred             EChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHCccCHhHC
Confidence            6899887 678999999999999999997 999998754334455555554332 2345678899999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++.+
T Consensus       385 Pt~~~l~~  392 (400)
T cd05105         385 PSFLHLSD  392 (400)
T ss_pred             cCHHHHHH
Confidence            99988864


No 356
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.78  E-value=1.3e-08  Score=100.00  Aligned_cols=83  Identities=23%  Similarity=0.383  Sum_probs=65.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      |+||++. ..++.++||||||+++|+|++ |.+||.+.. ...++..+..+.... .....+..+.+++.+||. +|..|
T Consensus       182 ~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~R  259 (273)
T cd05074         182 LALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE-NSEIYNYLIKGNRLK-QPPDCLEDVYELMCQCWSPEPKCR  259 (273)
T ss_pred             cCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC-HHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHcCCChhhC
Confidence            4788776 668889999999999999998 899998643 455666665544322 224567899999999999 59999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.+++.
T Consensus       260 ps~~~~~~  267 (273)
T cd05074         260 PSFQHLRD  267 (273)
T ss_pred             cCHHHHHH
Confidence            99999875


No 357
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=98.77  E-value=1.5e-08  Score=101.64  Aligned_cols=84  Identities=20%  Similarity=0.325  Sum_probs=62.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh--CCCCCCCCCchHHHHHHHHh-----CC-CCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT--FDYPYSECTHPAQIYKKVIS-----GK-KPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt--G~~PF~g~s~~~qI~~kIls-----g~-~P~~l~~~~S~elkdLI~kCL   71 (547)
                      +|||++. +.++.++||||||+++|+|++  |..||.... ..++...+..     +. .....++..++.+++|+.+||
T Consensus       198 ~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  276 (295)
T cd05097         198 MAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS-DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCW  276 (295)
T ss_pred             cChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC-hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHc
Confidence            5899877 678999999999999999988  677887644 3343333321     11 111223456889999999999


Q ss_pred             c-ccCCCCCHHHHhc
Q 008997           72 A-TVSSRLSARELLT   85 (547)
Q Consensus        72 ~-dPskRpSa~ELLk   85 (547)
                      . +|.+||++.++++
T Consensus       277 ~~~p~~RPs~~~i~~  291 (295)
T cd05097         277 SRDIKDRPTFNKIHH  291 (295)
T ss_pred             CCCchhCcCHHHHHH
Confidence            9 6999999999864


No 358
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.77  E-value=1.9e-08  Score=99.52  Aligned_cols=84  Identities=19%  Similarity=0.339  Sum_probs=61.7

Q ss_pred             CCccccc--------ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCC----CccccCCCHHHHHHH
Q 008997            1 MAPEVYE--------EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKP----EALFKVEDPEVRQFI   67 (547)
Q Consensus         1 MAPEVL~--------~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P----~~l~~~~S~elkdLI   67 (547)
                      +|||++.        ..++.++||||||+++|||++ |..||.... ...++..+..+...    ......+++.+++++
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  246 (268)
T cd05086         168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-DREVLNHVIKDQQVKLFKPQLELPYSERWYEVL  246 (268)
T ss_pred             cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHhhcccccCCCccCCCCcHHHHHHH
Confidence            5899874        235779999999999999996 577887654 44455544433221    122334688899999


Q ss_pred             HHHhcccCCCCCHHHHhc
Q 008997           68 EKCLATVSSRLSARELLT   85 (547)
Q Consensus        68 ~kCL~dPskRpSa~ELLk   85 (547)
                      ..||.+|.+||++.++++
T Consensus       247 ~~c~~~P~~Rp~~~~i~~  264 (268)
T cd05086         247 QFCWLSPEKRATAEEVHR  264 (268)
T ss_pred             HHHhhCcccCCCHHHHHH
Confidence            999988999999999864


No 359
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.77  E-value=1.4e-08  Score=102.62  Aligned_cols=84  Identities=24%  Similarity=0.369  Sum_probs=64.7

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |..||.+.. ...+...+..+..+ ..+...+..+++++.+||. +|.+|
T Consensus       178 ~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~R  255 (303)
T cd05110         178 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP-TREIPDLLEKGERL-PQPPICTIDVYMVMVKCWMIDADSR  255 (303)
T ss_pred             CCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHcCCChhhC
Confidence            6899887 678999999999999999997 889998643 34444444433322 2334568899999999999 69999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+++..
T Consensus       256 p~~~~l~~~  264 (303)
T cd05110         256 PKFKELAAE  264 (303)
T ss_pred             cCHHHHHHH
Confidence            999998763


No 360
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.76  E-value=1.6e-08  Score=101.42  Aligned_cols=84  Identities=19%  Similarity=0.315  Sum_probs=60.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh--CCCCCCCCCchHHHHHHHHh-----CC-CCCccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT--FDYPYSECTHPAQIYKKVIS-----GK-KPEALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt--G~~PF~g~s~~~qI~~kIls-----g~-~P~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||+.. +.|+.++|+|||||++|||++  |..||.... ..++...+..     +. .....+..+++.+++|+.+||
T Consensus       199 ~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  277 (296)
T cd05095         199 MSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS-DEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCW  277 (296)
T ss_pred             CCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC-hHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHc
Confidence            5788766 678999999999999999998  778987643 3343332211     11 111122346789999999999


Q ss_pred             c-ccCCCCCHHHHhc
Q 008997           72 A-TVSSRLSARELLT   85 (547)
Q Consensus        72 ~-dPskRpSa~ELLk   85 (547)
                      . +|.+||++.++++
T Consensus       278 ~~~p~~Rp~~~~i~~  292 (296)
T cd05095         278 RRNAKERPSFQEIHA  292 (296)
T ss_pred             CCCcccCCCHHHHHH
Confidence            9 6999999999863


No 361
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.76  E-value=1.4e-08  Score=101.20  Aligned_cols=82  Identities=29%  Similarity=0.434  Sum_probs=60.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHH-hCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMV-TFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELL-tG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      ||||++.  ..++.++||||||+++|||+ +|..||.... .......+ ....  ..+...++.+.+||.+||. +|.+
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~~li~~cl~~~p~~  262 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT-PSEKERFY-EKKH--RLPEPSCKELATLISQCLTYEPTQ  262 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC-hHHHHHHH-Hhcc--CCCCCCChHHHHHHHHHcccChhh
Confidence            6899886  45899999999999999995 6999998754 33322222 2111  1222346789999999999 5999


Q ss_pred             CCCHHHHhcC
Q 008997           77 RLSARELLTD   86 (547)
Q Consensus        77 RpSa~ELLkH   86 (547)
                      ||++.+++++
T Consensus       263 Rps~~~il~~  272 (274)
T cd05076         263 RPSFRTILRD  272 (274)
T ss_pred             CcCHHHHHHh
Confidence            9999999864


No 362
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.74  E-value=1.7e-08  Score=108.08  Aligned_cols=85  Identities=28%  Similarity=0.430  Sum_probs=66.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||++. ..++.++||||||+++|||++ |..||............+..+..+ ..+..++.++.+|+.+||. +|.+|
T Consensus       308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~l~~li~~cl~~~P~~R  386 (401)
T cd05107         308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM-AKPAHASDEIYEIMQKCWEEKFEIR  386 (401)
T ss_pred             eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHC
Confidence            6899887 678999999999999999998 889998755334444444444332 2344578999999999999 59999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |++.+|+..
T Consensus       387 Ps~~ell~~  395 (401)
T cd05107         387 PDFSQLVHL  395 (401)
T ss_pred             cCHHHHHHH
Confidence            999999853


No 363
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.71  E-value=5e-09  Score=105.41  Aligned_cols=85  Identities=21%  Similarity=0.287  Sum_probs=61.1

Q ss_pred             Cccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCc-hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            2 APEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTH-PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         2 APEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~-~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      |||.+.    ...++++|||||||++|+|+.|..||.-... -..+.-.|.++.+..+....+++.+.+||+.||+ +|.
T Consensus       206 APELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~  285 (302)
T KOG2345|consen  206 APELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPN  285 (302)
T ss_pred             CchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcc
Confidence            899987    3467899999999999999999999963100 0011112334443222223479999999999999 699


Q ss_pred             CCCCHHHHhcC
Q 008997           76 SRLSARELLTD   86 (547)
Q Consensus        76 kRpSa~ELLkH   86 (547)
                      +||++.+++.+
T Consensus       286 qRP~i~~ll~~  296 (302)
T KOG2345|consen  286 QRPTIPELLSK  296 (302)
T ss_pred             cCCCHHHHHHH
Confidence            99999999853


No 364
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.68  E-value=3.2e-08  Score=104.79  Aligned_cols=83  Identities=24%  Similarity=0.351  Sum_probs=72.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      |+||-+. ..|+.++|+|||||++|||+| |+.||.+.. +.++...+..|..-. .|-.++.++...+..||. .|..|
T Consensus       465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-PfEm~~ylkdGyRla-QP~NCPDeLf~vMacCWallpeeR  542 (563)
T KOG1024|consen  465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-PFEMEHYLKDGYRLA-QPFNCPDELFTVMACCWALLPEER  542 (563)
T ss_pred             cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-HHHHHHHHhccceec-CCCCCcHHHHHHHHHHHhcCcccC
Confidence            7889888 789999999999999999997 999999854 899998888887643 345689999999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |+++|+..
T Consensus       543 Psf~Qlv~  550 (563)
T KOG1024|consen  543 PSFSQLVI  550 (563)
T ss_pred             CCHHHHHH
Confidence            99999863


No 365
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.68  E-value=5.5e-09  Score=113.43  Aligned_cols=89  Identities=24%  Similarity=0.388  Sum_probs=68.2

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH--hCCCCCc------------------------
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI--SGKKPEA------------------------   54 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl--sg~~P~~------------------------   54 (547)
                      |||++. -.|+...|+||+||+||||.||+.-|.|.++ .++++..+  .|++|..                        
T Consensus       603 aPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN-N~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D  681 (752)
T KOG0670|consen  603 APEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN-NQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVD  681 (752)
T ss_pred             CcceeecCcccCCccceeeceeeEEeeccceecCCCCc-HHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecc
Confidence            899988 6899999999999999999999999999775 44444332  3333210                        


Q ss_pred             --------------cc-----------c-------CCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           55 --------------LF-----------K-------VEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        55 --------------l~-----------~-------~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                                    -|           .       .+-..+++|+.+||. +|.+|.+..++|+||||..
T Consensus       682 ~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  682 KVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             ccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                          00           0       011367899999999 7999999999999999974


No 366
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.66  E-value=3.7e-08  Score=98.08  Aligned_cols=85  Identities=24%  Similarity=0.342  Sum_probs=60.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC--------------chHHHHHHHHhCCCCCccccCCCHHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT--------------HPAQIYKKVISGKKPEALFKVEDPEVRQ   65 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s--------------~~~qI~~kIlsg~~P~~l~~~~S~elkd   65 (547)
                      +|||++. ..++.++||||||+++|+|+++..|+....              ........+..+.. ...+..++..+.+
T Consensus       179 ~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  257 (284)
T cd05079         179 YAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKR-LPRPPNCPEEVYQ  257 (284)
T ss_pred             cCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCcc-CCCCCCCCHHHHH
Confidence            5899877 678899999999999999999876643210              01111112222222 2234457899999


Q ss_pred             HHHHHhc-ccCCCCCHHHHhcC
Q 008997           66 FIEKCLA-TVSSRLSARELLTD   86 (547)
Q Consensus        66 LI~kCL~-dPskRpSa~ELLkH   86 (547)
                      |+.+||. +|.+||++.++++.
T Consensus       258 li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         258 LMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHHHHccCCcccCcCHHHHHHH
Confidence            9999999 69999999999853


No 367
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.65  E-value=3e-09  Score=115.46  Aligned_cols=97  Identities=28%  Similarity=0.441  Sum_probs=81.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC--CCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK--KPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~--~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      +||||+. ++|+..-|+||+|||+|--+.|..||.+.   +.|-..|....  +|..+|+.+++++.+||..+|+ +-.+
T Consensus       733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd---EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~k  809 (888)
T KOG4236|consen  733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED---EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRK  809 (888)
T ss_pred             cCHHHHhhccccccccceeeeEEEEEEecccccCCCc---cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHH
Confidence            5999999 89999999999999999999999999874   34555555443  4777899999999999999999 6999


Q ss_pred             CCCHHHHhcCCccccCCCCchhhh
Q 008997           77 RLSARELLTDPFLQIDDYDSDLRM  100 (547)
Q Consensus        77 RpSa~ELLkHPff~~~~~~~~l~~  100 (547)
                      |.+....|.|||++....-.+++.
T Consensus       810 Rysvdk~lsh~Wlq~yq~w~DLRe  833 (888)
T KOG4236|consen  810 RYSVDKSLSHPWLQDYQTWLDLRE  833 (888)
T ss_pred             hcchHhhccchhhhcchHHHHHHH
Confidence            999999999999998654344443


No 368
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.64  E-value=5e-08  Score=94.68  Aligned_cols=81  Identities=23%  Similarity=0.352  Sum_probs=59.1

Q ss_pred             CCccccc-c--cCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-E--EYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~--~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++. .  .++.++||||||+++|+|++ |..||.... .............   .+......+.+||.+||. +|.
T Consensus       171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~  246 (259)
T cd05037         171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS-SSEKERFYQDQHR---LPMPDCAELANLINQCWTYDPT  246 (259)
T ss_pred             cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC-chhHHHHHhcCCC---CCCCCchHHHHHHHHHhccChh
Confidence            5899987 3  68899999999999999999 578887653 3332222221111   111224789999999999 699


Q ss_pred             CCCCHHHHhc
Q 008997           76 SRLSARELLT   85 (547)
Q Consensus        76 kRpSa~ELLk   85 (547)
                      +||++.++++
T Consensus       247 ~Rpt~~~il~  256 (259)
T cd05037         247 KRPSFRAILR  256 (259)
T ss_pred             hCCCHHHHHH
Confidence            9999999975


No 369
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.64  E-value=5.6e-08  Score=96.41  Aligned_cols=84  Identities=19%  Similarity=0.292  Sum_probs=59.1

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch---------------HHHHHHHHhCCCCCccccCCCHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP---------------AQIYKKVISGKKPEALFKVEDPEVR   64 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~---------------~qI~~kIlsg~~P~~l~~~~S~elk   64 (547)
                      +|||++. ..++.++||||||+++|||++|..|+......               ..+.. +.........+..++.++.
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05081         178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE-LLKNNGRLPAPPGCPAEIY  256 (284)
T ss_pred             eCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH-HHhcCCcCCCCCCCCHHHH
Confidence            5899887 67899999999999999999987665421100               01111 1111111223345688999


Q ss_pred             HHHHHHhc-ccCCCCCHHHHhc
Q 008997           65 QFIEKCLA-TVSSRLSARELLT   85 (547)
Q Consensus        65 dLI~kCL~-dPskRpSa~ELLk   85 (547)
                      +|+.+||. +|.+|||+.+++.
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         257 AIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            99999999 6999999999974


No 370
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.62  E-value=3.4e-08  Score=106.74  Aligned_cols=92  Identities=26%  Similarity=0.372  Sum_probs=65.3

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCC---------CchHHHHHHH--------HhCCCCC----------
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSEC---------THPAQIYKKV--------ISGKKPE----------   53 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~---------s~~~qI~~kI--------lsg~~P~----------   53 (547)
                      ||||+. ..|++.+||||++|+++||+||-+.|...         .+.+.|...+        +.|++..          
T Consensus       419 apEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lr  498 (590)
T KOG1290|consen  419 APEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELR  498 (590)
T ss_pred             CcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcccccee
Confidence            899998 78999999999999999999999888521         1123333211        2222211          


Q ss_pred             -----ccccC---------C----CHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           54 -----ALFKV---------E----DPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        54 -----~l~~~---------~----S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                           .+|+.         +    ..++.+|+.-||. +|.+|++|.+.|+|||+....
T Consensus       499 hI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~  557 (590)
T KOG1290|consen  499 HIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVA  557 (590)
T ss_pred             cccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCC
Confidence                 01111         1    2356789999999 699999999999999998653


No 371
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.62  E-value=5.3e-08  Score=95.82  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=60.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCch--------------HHHHHHHHhCCCCCccccCCCHHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHP--------------AQIYKKVISGKKPEALFKVEDPEVRQ   65 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~--------------~qI~~kIlsg~~P~~l~~~~S~elkd   65 (547)
                      +|||++. ..++.++||||||+++|+|++|..|+......              ..+...+. .......+...+.++.+
T Consensus       179 ~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  257 (284)
T cd05038         179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYD  257 (284)
T ss_pred             cCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHH
Confidence            4788876 67888999999999999999999998643211              11122222 22222223456788999


Q ss_pred             HHHHHhc-ccCCCCCHHHHhc
Q 008997           66 FIEKCLA-TVSSRLSARELLT   85 (547)
Q Consensus        66 LI~kCL~-dPskRpSa~ELLk   85 (547)
                      |+.+||. +|.+||++.+++.
T Consensus       258 li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         258 LMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHhccChhhCCCHHHHHH
Confidence            9999999 6999999999874


No 372
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.62  E-value=1.5e-08  Score=115.27  Aligned_cols=90  Identities=29%  Similarity=0.449  Sum_probs=74.4

Q ss_pred             CCccccc------ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc-ccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE------EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL-FKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~------~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l-~~~~S~elkdLI~kCL~-   72 (547)
                      |||||+.      ..|+..+|+||+||+..||.-|.+|+.... +...+.+|...++|... |+.++.++-+||..||. 
T Consensus       190 MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-PmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~K  268 (953)
T KOG0587|consen  190 MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVK  268 (953)
T ss_pred             ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc-hhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhh
Confidence            8999997      258889999999999999999999998754 55555555544444333 66689999999999999 


Q ss_pred             ccCCCCCHHHHhcCCcccc
Q 008997           73 TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        73 dPskRpSa~ELLkHPff~~   91 (547)
                      +-.+||+..++|.|||+..
T Consensus       269 d~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  269 DYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             ccccCcchhhhccCCcccc
Confidence            5999999999999999983


No 373
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.60  E-value=5.4e-08  Score=100.84  Aligned_cols=89  Identities=29%  Similarity=0.446  Sum_probs=66.8

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHh-CC-----------------------------
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVIS-GK-----------------------------   50 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIls-g~-----------------------------   50 (547)
                      |||++. -.|.+.+||||+||++.||++|..-|.|.....+..+.+.. |.                             
T Consensus       185 apevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~  264 (369)
T KOG0665|consen  185 APEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFS  264 (369)
T ss_pred             CchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchh
Confidence            899987 45999999999999999999999999886655444332221 10                             


Q ss_pred             --CCCcccc-------CCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccc
Q 008997           51 --KPEALFK-------VEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQ   90 (547)
Q Consensus        51 --~P~~l~~-------~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~   90 (547)
                        .|...+.       .-...+++|+.+||. +|.+|.++.++|+||||+
T Consensus       265 ~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  265 ELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence              0111111       123468899999999 799999999999999998


No 374
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.59  E-value=3.2e-08  Score=109.35  Aligned_cols=82  Identities=23%  Similarity=0.418  Sum_probs=69.5

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHH-hCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMV-TFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELL-tG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      ||||-+. .+++.++|||-||||+||++ .|..||.+..|...| ..+..|..++ .++.+++.+..|+.+||. +|++|
T Consensus       559 maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-~~iEnGeRlP-~P~nCPp~LYslmskcWayeP~kR  636 (974)
T KOG4257|consen  559 MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-GHIENGERLP-CPPNCPPALYSLMSKCWAYEPSKR  636 (974)
T ss_pred             cCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-EEecCCCCCC-CCCCCChHHHHHHHHHhccCcccC
Confidence            8999998 89999999999999999998 599999998765444 3466666543 456789999999999999 79999


Q ss_pred             CCHHHHh
Q 008997           78 LSARELL   84 (547)
Q Consensus        78 pSa~ELL   84 (547)
                      |.+.+|.
T Consensus       637 Prftei~  643 (974)
T KOG4257|consen  637 PRFTEIK  643 (974)
T ss_pred             CcHHHHH
Confidence            9998875


No 375
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.59  E-value=3.2e-08  Score=112.46  Aligned_cols=80  Identities=19%  Similarity=0.375  Sum_probs=66.7

Q ss_pred             Cccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            2 APEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         2 APEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      |||++.    ...++|+|||+|||+||-||.+..||.+...     -.|+.+.+..+..+.++..+++||+.||+ +|.+
T Consensus       223 sPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~  297 (738)
T KOG1989|consen  223 SPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDE  297 (738)
T ss_pred             ChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----eeEEeccccCCCCccHHHHHHHHHHHHhccCccc
Confidence            799986    4688999999999999999999999987432     13667777544456789999999999999 6999


Q ss_pred             CCCHHHHhcC
Q 008997           77 RLSARELLTD   86 (547)
Q Consensus        77 RpSa~ELLkH   86 (547)
                      ||.+.+++.+
T Consensus       298 RPnI~Qv~~~  307 (738)
T KOG1989|consen  298 RPNIYQVLEE  307 (738)
T ss_pred             CCCHHHHHHH
Confidence            9999998754


No 376
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.58  E-value=6.7e-08  Score=113.16  Aligned_cols=88  Identities=35%  Similarity=0.630  Sum_probs=70.5

Q ss_pred             CCccccc--c--cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc--cccCCCHHHHHHHHHHhc-c
Q 008997            1 MAPEVYE--E--EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA--LFKVEDPEVRQFIEKCLA-T   73 (547)
Q Consensus         1 MAPEVL~--~--~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~--l~~~~S~elkdLI~kCL~-d   73 (547)
                      +|||++.  .  .|+.|+|+||+||+++||+   +||.....-..++..+..+..|.+  ++...-+.-+.+|+.+|. +
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hd  858 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHD  858 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCC
Confidence            6999987  3  6999999999999999998   568765555667777777777654  222233456789999999 6


Q ss_pred             cCCCCCHHHHhcCCcccc
Q 008997           74 VSSRLSARELLTDPFLQI   91 (547)
Q Consensus        74 PskRpSa~ELLkHPff~~   91 (547)
                      |++||||.|||++.||..
T Consensus       859 P~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  859 PSKRPTATELLNSELLPP  876 (1351)
T ss_pred             CccCCCHHHHhhccCCCc
Confidence            999999999999999985


No 377
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.57  E-value=1.2e-07  Score=104.99  Aligned_cols=79  Identities=18%  Similarity=0.230  Sum_probs=56.4

Q ss_pred             ccchHhHHHHHHHHHhCCC-CCCCCCc----------hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-cc---CCC
Q 008997           13 LVDIYSFGMCILEMVTFDY-PYSECTH----------PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TV---SSR   77 (547)
Q Consensus        13 kvDIWSlGVILyELLtG~~-PF~g~s~----------~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dP---skR   77 (547)
                      ++|+||+||++|+|++|.. ||.....          ....++.+.........+...++.+++|+.++|. +|   .+|
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R  491 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR  491 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence            5799999999999999875 7753211          1111222222333333455678999999999998 34   689


Q ss_pred             CCHHHHhcCCcccc
Q 008997           78 LSARELLTDPFLQI   91 (547)
Q Consensus        78 pSa~ELLkHPff~~   91 (547)
                      +|++|+|.||||..
T Consensus       492 lSa~eaL~Hp~f~~  505 (507)
T PLN03224        492 LSVGQALSHRFFLP  505 (507)
T ss_pred             CCHHHHhCCCCcCC
Confidence            99999999999963


No 378
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.54  E-value=9.1e-08  Score=99.71  Aligned_cols=93  Identities=20%  Similarity=0.431  Sum_probs=73.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCC--CCCch-----HHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYS--ECTHP-----AQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA   72 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~--g~s~~-----~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~   72 (547)
                      +|||++. ..|+..+|+|++||+++||..|+.||.  +..++     .-+++.|+...+  .++..++..+..+++..|.
T Consensus       418 iapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprslsvkas~vlkgfln  495 (593)
T KOG0695|consen  418 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLSVKASHVLKGFLN  495 (593)
T ss_pred             cchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceeehhhHHHHHHhhc
Confidence            5899999 789999999999999999999999996  22222     234555555443  2345568888889999999


Q ss_pred             -ccCCCCC------HHHHhcCCccccCCCC
Q 008997           73 -TVSSRLS------ARELLTDPFLQIDDYD   95 (547)
Q Consensus        73 -dPskRpS------a~ELLkHPff~~~~~~   95 (547)
                       +|..|+.      +.++..|+||+..+|.
T Consensus       496 kdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  496 KDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             CCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence             5998874      7899999999988775


No 379
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.53  E-value=8.1e-08  Score=107.37  Aligned_cols=89  Identities=25%  Similarity=0.425  Sum_probs=74.7

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||.|. ..|+.++|+|+|||++|||++ |+-||.|+. ..+|+++|-.+..- .-++.++..+.+++..||. .|..||
T Consensus       283 aPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~-g~qIL~~iD~~erL-pRPk~csedIY~imk~cWah~paDRp  360 (1039)
T KOG0199|consen  283 APESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR-GIQILKNIDAGERL-PRPKYCSEDIYQIMKNCWAHNPADRP  360 (1039)
T ss_pred             CHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC-HHHHHHhccccccC-CCCCCChHHHHHHHHHhccCCccccc
Confidence            899998 889999999999999999996 899999976 78999988765442 1346689999999999999 599999


Q ss_pred             CHHHHhcCCccccC
Q 008997           79 SARELLTDPFLQID   92 (547)
Q Consensus        79 Sa~ELLkHPff~~~   92 (547)
                      ++..|...-++++.
T Consensus       361 tFsair~~~~l~ea  374 (1039)
T KOG0199|consen  361 TFSAIREDLVLAEA  374 (1039)
T ss_pred             cHHHHHHhHHHHhc
Confidence            99998765555443


No 380
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.51  E-value=5.8e-08  Score=106.15  Aligned_cols=84  Identities=17%  Similarity=0.318  Sum_probs=71.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      +|||.+. .-|++++|||||||++||+++ |..||.+.. ..++..+|....++...+...++++..++.+|+. +|..|
T Consensus       329 LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~-~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R  407 (474)
T KOG0194|consen  329 LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK-NYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDR  407 (474)
T ss_pred             cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC-HHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhc
Confidence            6999998 889999999999999999997 888999966 6788888866555545556778889999999999 69999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |++.++.+
T Consensus       408 ~tm~~i~~  415 (474)
T KOG0194|consen  408 PTMSTIKK  415 (474)
T ss_pred             cCHHHHHH
Confidence            99998863


No 381
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.50  E-value=2.4e-07  Score=92.78  Aligned_cols=91  Identities=22%  Similarity=0.443  Sum_probs=68.5

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCC-CCCCchHHHHHHH--H----------h-------------CCCCC
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPY-SECTHPAQIYKKV--I----------S-------------GKKPE   53 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF-~g~s~~~qI~~kI--l----------s-------------g~~P~   53 (547)
                      .||.+.  +.|+..-|+|||||++..|+..+-|| .|.++..|+.+..  +          .             |....
T Consensus       200 GPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~r  279 (338)
T KOG0668|consen  200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSR  279 (338)
T ss_pred             CchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccc
Confidence            488876  78999999999999999999988776 5666666665422  1          0             00011


Q ss_pred             ccc---------cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           54 ALF---------KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        54 ~l~---------~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                      ..|         ..+++++.+|+.++|. +-..|+||+|++.||||...
T Consensus       280 k~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  280 KPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             ccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence            111         2357999999999999 89999999999999999753


No 382
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.50  E-value=1.2e-07  Score=110.94  Aligned_cols=85  Identities=29%  Similarity=0.408  Sum_probs=60.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      ||||++. ..++.++||||+||++|||++|..||.........................+++.+.+++.+||. +|.+|+
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~  277 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERY  277 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCc
Confidence            7999987 67899999999999999999999999864322212221111111111234578899999999999 699998


Q ss_pred             CHHHHhc
Q 008997           79 SARELLT   85 (547)
Q Consensus        79 Sa~ELLk   85 (547)
                      +..+.+.
T Consensus       278 ss~eeLl  284 (932)
T PRK13184        278 SSVQELK  284 (932)
T ss_pred             CHHHHHH
Confidence            7655543


No 383
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.50  E-value=2e-07  Score=96.63  Aligned_cols=92  Identities=26%  Similarity=0.522  Sum_probs=67.0

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCC------chHH--HHHHHHh--CCC-----------CCc----
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECT------HPAQ--IYKKVIS--GKK-----------PEA----   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s------~~~q--I~~kIls--g~~-----------P~~----   54 (547)
                      |||.+.  ..|+.++|+|++|||+.||++-++-|.+..      ++.+  -+.+|..  |.+           |.-    
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l  286 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL  286 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence            899988  679999999999999999999988886531      1211  1122221  111           100    


Q ss_pred             ------------------cccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           55 ------------------LFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        55 ------------------l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                                        .++.-++.+.+|+.++|+ ||.+|.+++++|.|+||.++.
T Consensus       287 s~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~  344 (438)
T KOG0666|consen  287 SDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP  344 (438)
T ss_pred             HHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence                              112346678899999999 899999999999999999864


No 384
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.46  E-value=1.1e-07  Score=111.41  Aligned_cols=86  Identities=28%  Similarity=0.380  Sum_probs=57.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCc-hHHHHHHH---HhCCC------CC---c--cccCCCHHHH
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTH-PAQIYKKV---ISGKK------PE---A--LFKVEDPEVR   64 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~-~~qI~~kI---lsg~~------P~---~--l~~~~S~elk   64 (547)
                      ||||++. ..|+.++|||||||++|||++|+.||..... ...+....   .....      |.   .  .......++.
T Consensus       845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  924 (968)
T PLN00113        845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM  924 (968)
T ss_pred             cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHH
Confidence            7999988 6799999999999999999999999853211 11111111   11000      00   0  0001123567


Q ss_pred             HHHHHHhc-ccCCCCCHHHHhcC
Q 008997           65 QFIEKCLA-TVSSRLSARELLTD   86 (547)
Q Consensus        65 dLI~kCL~-dPskRpSa~ELLkH   86 (547)
                      +++.+||. +|.+||++.++++.
T Consensus       925 ~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        925 NLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHhhCcCCchhCcCHHHHHHH
Confidence            88999999 69999999999753


No 385
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.46  E-value=3.7e-07  Score=101.07  Aligned_cols=83  Identities=24%  Similarity=0.370  Sum_probs=70.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      .|||-|. ..|+.|+|||+|||+|||+.| |-.||.+.. ..++|..+..+.... -+..+++.+..||+.||+ .|+.|
T Consensus       433 TAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-lSqVY~LLEkgyRM~-~PeGCPpkVYeLMraCW~WsPsDR  510 (1157)
T KOG4278|consen  433 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYGLLEKGYRMD-GPEGCPPKVYELMRACWNWSPSDR  510 (1157)
T ss_pred             cCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-HHHHHHHHhcccccc-CCCCCCHHHHHHHHHHhcCCcccC
Confidence            3899887 778899999999999999996 889999964 789998777776543 346789999999999999 79999


Q ss_pred             CCHHHHhc
Q 008997           78 LSARELLT   85 (547)
Q Consensus        78 pSa~ELLk   85 (547)
                      |+++++-+
T Consensus       511 PsFaeiHq  518 (1157)
T KOG4278|consen  511 PSFAEIHQ  518 (1157)
T ss_pred             ccHHHHHH
Confidence            99998843


No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.45  E-value=3.7e-07  Score=92.48  Aligned_cols=91  Identities=26%  Similarity=0.362  Sum_probs=68.6

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHH--HhCCCCCcc----------------------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKV--ISGKKPEAL----------------------   55 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kI--lsg~~P~~l----------------------   55 (547)
                      +||.+.  ..|+++.|||..|||+.||.++.+-+++.++..++ ..|  +-|......                      
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql-~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~  274 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQL-HLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQ  274 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHH-HHHHHHhccCCcccCCCcccchHHHhccCCCCCcch
Confidence            588877  68999999999999999999999999986654433 222  122111000                      


Q ss_pred             ---------ccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           56 ---------FKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        56 ---------~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                               +-..++++.+|+.++|. ||.+|+.+.++++|.||..+.
T Consensus       275 ~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  275 KRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             hhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence                     01235688899999999 899999999999999998653


No 387
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.40  E-value=3.8e-07  Score=105.98  Aligned_cols=97  Identities=33%  Similarity=0.501  Sum_probs=81.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCC--CCccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKK--PEALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~--P~~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      .||||+. ++|+..||||++|+|+||.+.|..||.+.+ +++++..++....  |.. ....+++++++|.++|. .|..
T Consensus       225 iaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt-peelfg~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~  302 (1205)
T KOG0606|consen  225 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-PEELFGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLC  302 (1205)
T ss_pred             cChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC-HHHHHhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHh
Confidence            4899987 889999999999999999999999999965 8888888877654  332 33468999999999999 5988


Q ss_pred             CC---CHHHHhcCCccccCCCCchhh
Q 008997           77 RL---SARELLTDPFLQIDDYDSDLR   99 (547)
Q Consensus        77 Rp---Sa~ELLkHPff~~~~~~~~l~   99 (547)
                      |.   .+-++.+|+||+..+|...|+
T Consensus       303 Rlgt~ga~evk~h~ff~~LDw~~llR  328 (1205)
T KOG0606|consen  303 RLGTGGALEVKQHGFFQLLDWKSLLR  328 (1205)
T ss_pred             hcccchhhhhhhccceeecccchhhh
Confidence            86   478889999999998885554


No 388
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.36  E-value=1.3e-07  Score=104.31  Aligned_cols=89  Identities=21%  Similarity=0.370  Sum_probs=74.0

Q ss_pred             Cccccc-ccCC-cccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            2 APEVYE-EEYN-ELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         2 APEVL~-~~Y~-~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |||++. ..|+ +.+|+||+|+++|.|++|..||.+. +...+..+++.+++-  ++-.++.++++||+++|. +|++|+
T Consensus       222 aPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~-~lk~Lr~rvl~gk~r--Ip~~ms~dce~lLrk~lvl~Pskr~  298 (596)
T KOG0586|consen  222 APELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ-NLKELRPRVLRGKYR--IPFYMSCDCEDLLRKFLVLNPSKRG  298 (596)
T ss_pred             ChHhhcCcccCCcceehhhhhhhheeeeecccccCCc-ccccccchheeeeec--ccceeechhHHHHHHhhccCccccC
Confidence            899988 4564 6999999999999999999999984 466666677776652  233468999999999999 699999


Q ss_pred             CHHHHhcCCccccCC
Q 008997           79 SARELLTDPFLQIDD   93 (547)
Q Consensus        79 Sa~ELLkHPff~~~~   93 (547)
                      +..+++.|.|.....
T Consensus       299 ~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  299 PCDQIMKDRWRNDLL  313 (596)
T ss_pred             CHHHhhhhcccchhh
Confidence            999999999997643


No 389
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.35  E-value=3e-07  Score=98.71  Aligned_cols=91  Identities=22%  Similarity=0.446  Sum_probs=69.1

Q ss_pred             CCccccc-----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHH--HHHhCCC-CCccccCCCHHHHHHHHHHhc
Q 008997            1 MAPEVYE-----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYK--KVISGKK-PEALFKVEDPEVRQFIEKCLA   72 (547)
Q Consensus         1 MAPEVL~-----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~--kIlsg~~-P~~l~~~~S~elkdLI~kCL~   72 (547)
                      ++||++.     ...+.++||||+|||+|..+.|+.||........|+.  .|+...- ..+.-++++.++++||++||+
T Consensus       647 LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLa  726 (775)
T KOG1151|consen  647 LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLA  726 (775)
T ss_pred             cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHH
Confidence            4788875     3577899999999999999999999986433333432  2332221 122235689999999999999


Q ss_pred             -ccCCCCCHHHHhcCCcccc
Q 008997           73 -TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        73 -dPskRpSa~ELLkHPff~~   91 (547)
                       .-..|....+|..||+|..
T Consensus       727 YRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  727 YRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             hhhhhhhhHHHHccCccccc
Confidence             5899999999999999975


No 390
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=98.28  E-value=2.7e-07  Score=104.30  Aligned_cols=84  Identities=17%  Similarity=0.333  Sum_probs=70.6

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHH-hCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMV-TFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELL-tG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      .|||.+. ..++.++|||||||+|||.+ .|+.|||..+| ..+++.|..|..-+ .+..++..+..|+..||+ +-..|
T Consensus       801 TAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-QdVIkaIe~gyRLP-pPmDCP~aL~qLMldCWqkdR~~R  878 (996)
T KOG0196|consen  801 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEQGYRLP-PPMDCPAALYQLMLDCWQKDRNRR  878 (996)
T ss_pred             cChhHhhhcccCchhhccccceEEEEecccCCCcccccch-HHHHHHHHhccCCC-CCCCCcHHHHHHHHHHHHHHhhcC
Confidence            3899998 89999999999999999987 59999999775 56677787776522 345689999999999999 49999


Q ss_pred             CCHHHHhcC
Q 008997           78 LSARELLTD   86 (547)
Q Consensus        78 pSa~ELLkH   86 (547)
                      |.+.+|+.+
T Consensus       879 P~F~qiV~~  887 (996)
T KOG0196|consen  879 PKFAQIVST  887 (996)
T ss_pred             CCHHHHHHH
Confidence            999999753


No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.27  E-value=2.5e-07  Score=105.07  Aligned_cols=87  Identities=24%  Similarity=0.394  Sum_probs=65.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhC-CCCCCCCCchHHHHHHHHhCCCCC-ccccCCCHHHHHHHHHHhc-ccCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTF-DYPYSECTHPAQIYKKVISGKKPE-ALFKVEDPEVRQFIEKCLA-TVSS   76 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG-~~PF~g~s~~~qI~~kIlsg~~P~-~l~~~~S~elkdLI~kCL~-dPsk   76 (547)
                      +|||++. ..-..++||+|+||++|..++| ..||...   .+.-..|+.+.+.- .+.+..+.++++||.+||. +|..
T Consensus       681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~---~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~  757 (903)
T KOG1027|consen  681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS---LERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQL  757 (903)
T ss_pred             cCHHHHhccccCcccchhhcCceEEEEecCCccCCCch---HHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCccc
Confidence            6999998 4556699999999999999885 8999752   22223455565421 1111222389999999999 6999


Q ss_pred             CCCHHHHhcCCccc
Q 008997           77 RLSARELLTDPFLQ   90 (547)
Q Consensus        77 RpSa~ELLkHPff~   90 (547)
                      ||+|.++|.||||=
T Consensus       758 RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  758 RPSATDVLNHPLFW  771 (903)
T ss_pred             CCCHHHHhCCCccC
Confidence            99999999999994


No 392
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.24  E-value=6.5e-07  Score=95.36  Aligned_cols=91  Identities=27%  Similarity=0.483  Sum_probs=64.7

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCch----HHHHH--------HH--HhCC--------C------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHP----AQIYK--------KV--ISGK--------K------   51 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~----~qI~~--------kI--lsg~--------~------   51 (547)
                      ||||+.  +.-++++||||.|||++-++++.+||....+.    .++..        +.  +.|.        .      
T Consensus       245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~  324 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPEL  324 (418)
T ss_pred             chHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHH
Confidence            799987  67788999999999999999999999643221    11111        00  0111        0      


Q ss_pred             -------------C--------CccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           52 -------------P--------EALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        52 -------------P--------~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                                   +        .......+..+.+|+.+||. +|.+|.+|+++|+||||...
T Consensus       325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence                         0        00011235588999999999 79999999999999999843


No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.12  E-value=1.8e-06  Score=85.55  Aligned_cols=54  Identities=31%  Similarity=0.631  Sum_probs=46.9

Q ss_pred             CCccccc-----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCc
Q 008997            1 MAPEVYE-----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEA   54 (547)
Q Consensus         1 MAPEVL~-----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~   54 (547)
                      ||||.+.     ..|+.++||||+|+++.||+++++||.....+.+.++.|.....|..
T Consensus       215 maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~L  273 (282)
T KOG0984|consen  215 MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQL  273 (282)
T ss_pred             CChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCC
Confidence            8999986     47999999999999999999999999887778888888887766543


No 394
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.10  E-value=6.7e-06  Score=80.01  Aligned_cols=91  Identities=20%  Similarity=0.303  Sum_probs=64.8

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHH-hCCCCCCCCCchHHHHHHHH-hCCC-----C----------Cccc------
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMV-TFDYPYSECTHPAQIYKKVI-SGKK-----P----------EALF------   56 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELL-tG~~PF~g~s~~~qI~~kIl-sg~~-----P----------~~l~------   56 (547)
                      +|.|+.  +-|++..|+||.|||+.|+. .|.+.|.+.....++.+... -|..     |          .+.+      
T Consensus       169 ppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsw  248 (292)
T KOG0662|consen  169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSW  248 (292)
T ss_pred             CcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchH
Confidence            466766  56999999999999999998 58888888654444333221 1111     1          1111      


Q ss_pred             ----cCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccC
Q 008997           57 ----KVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQID   92 (547)
Q Consensus        57 ----~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~   92 (547)
                          +..+...++|++++|. .|.+|.+++.+|+||||...
T Consensus       249 sqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  249 SQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             HHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence                1234467899999999 79999999999999999753


No 395
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.06  E-value=7.3e-06  Score=87.53  Aligned_cols=85  Identities=16%  Similarity=0.319  Sum_probs=70.5

Q ss_pred             Cccccc-ccC-CcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            2 APEVYE-EEY-NELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         2 APEVL~-~~Y-~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      +||++. ..| ++.+|.||+||++|.|+.|..||.|.. -..+.+.|..|.+-.   +..+..+.-||+-||. +|.+|.
T Consensus       220 SPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-hk~lvrQIs~GaYrE---P~~PSdA~gLIRwmLmVNP~RRA  295 (668)
T KOG0611|consen  220 SPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-HKRLVRQISRGAYRE---PETPSDASGLIRWMLMVNPERRA  295 (668)
T ss_pred             CccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-HHHHHHHhhcccccC---CCCCchHHHHHHHHHhcCcccch
Confidence            588887 456 579999999999999999999999965 566777888887632   2245678899999998 699999


Q ss_pred             CHHHHhcCCccc
Q 008997           79 SARELLTDPFLQ   90 (547)
Q Consensus        79 Sa~ELLkHPff~   90 (547)
                      |+.++..|=|+.
T Consensus       296 TieDiAsHWWvN  307 (668)
T KOG0611|consen  296 TIEDIASHWWVN  307 (668)
T ss_pred             hHHHHhhhheee
Confidence            999999998875


No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.02  E-value=4.1e-06  Score=93.74  Aligned_cols=91  Identities=29%  Similarity=0.453  Sum_probs=70.8

Q ss_pred             CCccccc----ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHH-HhCCCCCcc--ccCCCHHHHHHHHHHhcc
Q 008997            1 MAPEVYE----EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKV-ISGKKPEAL--FKVEDPEVRQFIEKCLAT   73 (547)
Q Consensus         1 MAPEVL~----~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kI-lsg~~P~~l--~~~~S~elkdLI~kCL~d   73 (547)
                      |||||-.    +.|+.++|||++|+...|+.--++|..... +.+..... .++..|..+  ...+++.+.+|++.+|.+
T Consensus       179 mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh-pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altk  257 (829)
T KOG0576|consen  179 MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH-PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTK  257 (829)
T ss_pred             cchhHHHHHhcccccccccccccccchhhhhhcCCcccccc-hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcC
Confidence            8999965    689999999999999999998888876544 55444333 333333222  234688999999999996


Q ss_pred             -cCCCCCHHHHhcCCccccC
Q 008997           74 -VSSRLSARELLTDPFLQID   92 (547)
Q Consensus        74 -PskRpSa~ELLkHPff~~~   92 (547)
                       |.+||+++.+|.|||+...
T Consensus       258 npKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  258 NPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             CCccCCChhhheeceeeccc
Confidence             9999999999999999754


No 397
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.01  E-value=7.7e-06  Score=93.35  Aligned_cols=81  Identities=26%  Similarity=0.375  Sum_probs=66.3

Q ss_pred             Cccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCC
Q 008997            2 APEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRL   78 (547)
Q Consensus         2 APEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRp   78 (547)
                      |=|.+. ..|+.++|||||||++||++| |..||.+.. ..+|-..+..|.. -..++..+-++.-++.+||. ++..||
T Consensus       868 ale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~-~~eI~dlle~geR-LsqPpiCtiDVy~~mvkCwmid~~~rp  945 (1177)
T KOG1025|consen  868 ALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP-AEEIPDLLEKGER-LSQPPICTIDVYMVMVKCWMIDADSRP  945 (1177)
T ss_pred             HHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC-HHHhhHHHhcccc-CCCCCCccHHHHHHHHHHhccCcccCc
Confidence            334444 689999999999999999997 899999865 6777777766665 34466788999999999999 799999


Q ss_pred             CHHHHh
Q 008997           79 SARELL   84 (547)
Q Consensus        79 Sa~ELL   84 (547)
                      +++++.
T Consensus       946 ~fkel~  951 (1177)
T KOG1025|consen  946 TFKELA  951 (1177)
T ss_pred             cHHHHH
Confidence            998875


No 398
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=97.99  E-value=6.3e-06  Score=91.17  Aligned_cols=84  Identities=19%  Similarity=0.290  Sum_probs=64.8

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHH--hCCCCCCCCCchHHHHHHH---HhCCCC---CccccCCCHHHHHHHHHHh
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMV--TFDYPYSECTHPAQIYKKV---ISGKKP---EALFKVEDPEVRQFIEKCL   71 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELL--tG~~PF~g~s~~~qI~~kI---lsg~~P---~~l~~~~S~elkdLI~kCL   71 (547)
                      ||||.+. +.+++++|+|+||+++||++  +.+.||...++ .++....   .....+   ...++.++.++.++|.+||
T Consensus       706 mawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw  784 (807)
T KOG1094|consen  706 MAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-EQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCW  784 (807)
T ss_pred             hhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-HHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHh
Confidence            7999887 99999999999999999986  57899988664 4444332   222211   1235667889999999999


Q ss_pred             c-ccCCCCCHHHHhc
Q 008997           72 A-TVSSRLSARELLT   85 (547)
Q Consensus        72 ~-dPskRpSa~ELLk   85 (547)
                      . +..+||+++++..
T Consensus       785 ~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  785 RRESEQRPSFEQLHL  799 (807)
T ss_pred             chhhhcCCCHHHHHH
Confidence            9 6999999999854


No 399
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.93  E-value=1.8e-06  Score=97.49  Aligned_cols=93  Identities=24%  Similarity=0.468  Sum_probs=69.8

Q ss_pred             CCccccc-ccCCc-ccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHH--HhCC----CCCccccCCCHHHHHHHHHHhc
Q 008997            1 MAPEVYE-EEYNE-LVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKV--ISGK----KPEALFKVEDPEVRQFIEKCLA   72 (547)
Q Consensus         1 MAPEVL~-~~Y~~-kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kI--lsg~----~P~~l~~~~S~elkdLI~kCL~   72 (547)
                      +|||++. ..|++ .+||||.|++++.|.+|+.||.......+.+...  ....    .+..++..++.+.+.+|.++|+
T Consensus       491 ~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~  570 (601)
T KOG0590|consen  491 LAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQ  570 (601)
T ss_pred             cCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHcc
Confidence            6999998 77886 7899999999999999999996432222211000  0000    1333455678889999999999


Q ss_pred             -ccCCCCCHHHHhcCCccccCC
Q 008997           73 -TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        73 -dPskRpSa~ELLkHPff~~~~   93 (547)
                       +|.+|.++++|++++||+...
T Consensus       571 ~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  571 LDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             CChhheecHHHHhhChHhhhcc
Confidence             699999999999999999764


No 400
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.92  E-value=7.5e-06  Score=91.13  Aligned_cols=87  Identities=22%  Similarity=0.395  Sum_probs=71.9

Q ss_pred             CCcccccccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCCC
Q 008997            1 MAPEVYEEEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRLS   79 (547)
Q Consensus         1 MAPEVL~~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRpS   79 (547)
                      ||||++. .+...+|+||||++++||++|..||.+     .+.+.|+....+  .+...+..+++++..++. .|..|+.
T Consensus       160 mApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~Il~~~~~--~p~~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  160 RAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKRILKAELE--MPRELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHHHhhhccC--CchhhhHHHHHHHHHHHhhCHHHHhc
Confidence            7999987 678899999999999999999999986     455666654442  345678899999999998 4998875


Q ss_pred             -----HHHHhcCCccccCCCC
Q 008997           80 -----ARELLTDPFLQIDDYD   95 (547)
Q Consensus        80 -----a~ELLkHPff~~~~~~   95 (547)
                           +.++++|+||+..+|.
T Consensus       232 ~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  232 AGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             cCcchhHHHhccchheeeeHh
Confidence                 5789999999988776


No 401
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.87  E-value=1.5e-05  Score=81.60  Aligned_cols=82  Identities=17%  Similarity=0.368  Sum_probs=63.9

Q ss_pred             CCccccc-cc---CCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHH-HhCCCCCccccCCCHHHHHHHHHHhc-cc
Q 008997            1 MAPEVYE-EE---YNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKV-ISGKKPEALFKVEDPEVRQFIEKCLA-TV   74 (547)
Q Consensus         1 MAPEVL~-~~---Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kI-lsg~~P~~l~~~~S~elkdLI~kCL~-dP   74 (547)
                      |+||.+. ..   --..+|+|||.++++||.|.+.||...+ +.++-.+| +.|-.+ .+++.+++.+..|+.-|+. +|
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfadls-pmecgmkialeglrv-~ippgis~hm~klm~icmnedp  430 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS-PMECGMKIALEGLRV-HIPPGISRHMNKLMNICMNEDP  430 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC-chhhhhhhhhccccc-cCCCCccHHHHHHHHHHhcCCC
Confidence            7899887 22   2248999999999999999999999876 45554455 455443 3566789999999999999 79


Q ss_pred             CCCCCHHHHh
Q 008997           75 SSRLSARELL   84 (547)
Q Consensus        75 skRpSa~ELL   84 (547)
                      .+||.+..++
T Consensus       431 gkrpkfdmiv  440 (448)
T KOG0195|consen  431 GKRPKFDMIV  440 (448)
T ss_pred             CcCCCcceeh
Confidence            9999977653


No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.50  E-value=0.00016  Score=74.37  Aligned_cols=91  Identities=24%  Similarity=0.442  Sum_probs=63.4

Q ss_pred             Cccccc--ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHH-----------------------hCC-CCCc-
Q 008997            2 APEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVI-----------------------SGK-KPEA-   54 (547)
Q Consensus         2 APEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIl-----------------------sg~-~P~~-   54 (547)
                      |||+++  ..|+.++||||+|||+.||+-.+..|..-+ +-+.+..|.                       .+. .+.. 
T Consensus       225 APEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~-PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~  303 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG-PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDT  303 (449)
T ss_pred             cHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC-hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCc
Confidence            899988  689999999999999999998888888644 333232221                       111 1111 


Q ss_pred             --cccC-----CCHHHHHHHHHHhc-ccCCCCCHHHHhcCCccccCC
Q 008997           55 --LFKV-----EDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQIDD   93 (547)
Q Consensus        55 --l~~~-----~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~~~   93 (547)
                        ++..     ...+...++.++|. +|.+|.+.++++.|+++.+..
T Consensus       304 ~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  304 QRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR  350 (449)
T ss_pred             cceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence              1121     22355667777777 699999999999999987653


No 403
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=97.48  E-value=8.9e-05  Score=81.39  Aligned_cols=84  Identities=27%  Similarity=0.494  Sum_probs=63.0

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskR   77 (547)
                      |+||.+. +.|+.++|||+||++++||+. ...+|.    -...+.-+..+.+|..++.. .|+-..|+..+|.. |.+|
T Consensus       429 msPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~~d~r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~R  503 (516)
T KOG1033|consen  429 MSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATLTDIRDGIIPPEFLQD-YPEEYTLLQQLLSPSPEER  503 (516)
T ss_pred             CCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhhhhhhcCCCChHHhhc-CcHHHHHHHHhcCCCcccC
Confidence            7999999 789999999999999999997 333332    22334556677777544433 34557899999994 9999


Q ss_pred             CCHHHHhcCCcc
Q 008997           78 LSARELLTDPFL   89 (547)
Q Consensus        78 pSa~ELLkHPff   89 (547)
                      |++.+.-.|.|.
T Consensus       504 P~~~~~~~~~~~  515 (516)
T KOG1033|consen  504 PSAIEVALHEFL  515 (516)
T ss_pred             chHHHHhhhhhc
Confidence            988887777765


No 404
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.46  E-value=0.00023  Score=75.81  Aligned_cols=84  Identities=25%  Similarity=0.339  Sum_probs=54.2

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCC--c---hHHH-HHHHHhCCCCCc----cc-cCCC--HHH---
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECT--H---PAQI-YKKVISGKKPEA----LF-KVED--PEV---   63 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s--~---~~qI-~~kIlsg~~P~~----l~-~~~S--~el---   63 (547)
                      +|||.+. +..+.++|||||||+++||++|+.|.....  .   .... ...+..+.....    +. ...+  .++   
T Consensus       245 ~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~  324 (361)
T KOG1187|consen  245 LAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKL  324 (361)
T ss_pred             CChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHH
Confidence            6899987 789999999999999999999998876421  1   1111 122222222111    11 1222  233   


Q ss_pred             HHHHHHHhc-ccCCCCCHHHHh
Q 008997           64 RQFIEKCLA-TVSSRLSARELL   84 (547)
Q Consensus        64 kdLI~kCL~-dPskRpSa~ELL   84 (547)
                      ..+..+|+. +|..||++.+++
T Consensus       325 ~~~a~~C~~~~~~~RP~m~~Vv  346 (361)
T KOG1187|consen  325 AELALRCLRPDPKERPTMSQVV  346 (361)
T ss_pred             HHHHHHHcCcCCCcCcCHHHHH
Confidence            345578998 599999999864


No 405
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.45  E-value=0.00012  Score=85.74  Aligned_cols=95  Identities=27%  Similarity=0.474  Sum_probs=80.3

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCcc-ccCCCHHHHHHHHHHhc-ccCCC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEAL-FKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l-~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      .|||.+. ...+..+|+|++|++++|.++|.+||.... +.+++..+..+..|... +...+.++++++.++|. .+.+|
T Consensus      1002 laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t-pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET-PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred             cCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc-hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence            4788877 678889999999999999999999999854 78899888888776543 33468999999999999 59999


Q ss_pred             CCHH---HHhcCCccccCCCCc
Q 008997           78 LSAR---ELLTDPFLQIDDYDS   96 (547)
Q Consensus        78 pSa~---ELLkHPff~~~~~~~   96 (547)
                      ..+.   ++..|+||+..+|..
T Consensus      1081 ~~a~~~~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred             cCcccccccccCCccCCCCccc
Confidence            8866   899999999988764


No 406
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=96.97  E-value=0.001  Score=73.55  Aligned_cols=84  Identities=25%  Similarity=0.411  Sum_probs=60.2

Q ss_pred             CCccccccc--------CCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHh-CCCCC--ccc-c-CCCHHHH
Q 008997            1 MAPEVYEEE--------YNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVIS-GKKPE--ALF-K-VEDPEVR   64 (547)
Q Consensus         1 MAPEVL~~~--------Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIls-g~~P~--~l~-~-~~S~elk   64 (547)
                      .|||++...        .+.+.|||||||+++|+++...||.....   +.++..++.. +..+.  ..+ . ...+++.
T Consensus       118 ~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~  197 (484)
T KOG1023|consen  118 TAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELL  197 (484)
T ss_pred             cCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHH
Confidence            489988721        45679999999999999999999975221   2456666666 33211  111 1 3455788


Q ss_pred             HHHHHHhc-ccCCCCCHHHHh
Q 008997           65 QFIEKCLA-TVSSRLSARELL   84 (547)
Q Consensus        65 dLI~kCL~-dPskRpSa~ELL   84 (547)
                      .++..||. +|..||+++++-
T Consensus       198 ~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  198 LLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHHhcccChhhCccHHHHH
Confidence            99999999 699999998874


No 407
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.85  E-value=0.0011  Score=71.35  Aligned_cols=91  Identities=24%  Similarity=0.273  Sum_probs=62.1

Q ss_pred             CCccccc---cc---CC-cccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-
Q 008997            1 MAPEVYE---EE---YN-ELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-   72 (547)
Q Consensus         1 MAPEVL~---~~---Y~-~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-   72 (547)
                      ||||+..   +.   .+ .|+|.|+.|.+.||++...-||.+.....--.........| .++..+++.+++++..+|+ 
T Consensus       418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP-alp~~vpp~~rqlV~~lL~r  496 (598)
T KOG4158|consen  418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP-ALPSRVPPVARQLVFDLLKR  496 (598)
T ss_pred             cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC-CCcccCChHHHHHHHHHhcC
Confidence            8999976   22   12 38999999999999999999998633211111112233334 3556789999999999999 


Q ss_pred             ccCCCCC---HHHHhcCCccccC
Q 008997           73 TVSSRLS---ARELLTDPFLQID   92 (547)
Q Consensus        73 dPskRpS---a~ELLkHPff~~~   92 (547)
                      +|++|++   ++-+|+-..+...
T Consensus       497 ~pskRvsp~iAANvl~LsLw~~~  519 (598)
T KOG4158|consen  497 DPSKRVSPNIAANVLNLSLWRMG  519 (598)
T ss_pred             CccccCCccHHHhHHHHHHhcCc
Confidence            5999998   4445554444433


No 408
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.78  E-value=0.0015  Score=77.43  Aligned_cols=81  Identities=32%  Similarity=0.430  Sum_probs=56.7

Q ss_pred             CCcccccc------------cCCcccchHhHHHHHHHHHh-CCCCCCCCCchHHHHHHHHhC-CC-CCc-cccCCCHHHH
Q 008997            1 MAPEVYEE------------EYNELVDIYSFGMCILEMVT-FDYPYSECTHPAQIYKKVISG-KK-PEA-LFKVEDPEVR   64 (547)
Q Consensus         1 MAPEVL~~------------~Y~~kvDIWSlGVILyELLt-G~~PF~g~s~~~qI~~kIlsg-~~-P~~-l~~~~S~elk   64 (547)
                      +|||.+..            ...++.||+|+||++.||++ |++||.    ..|++.. .++ .. +.. +...-++.++
T Consensus       194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~----LSQL~aY-r~~~~~~~e~~Le~Ied~~~R  268 (1431)
T KOG1240|consen  194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT----LSQLLAY-RSGNADDPEQLLEKIEDVSLR  268 (1431)
T ss_pred             cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc----HHHHHhH-hccCccCHHHHHHhCcCccHH
Confidence            58888641            14578999999999999987 788885    3444432 222 11 111 1122366889


Q ss_pred             HHHHHHhc-ccCCCCCHHHHhcC
Q 008997           65 QFIEKCLA-TVSSRLSARELLTD   86 (547)
Q Consensus        65 dLI~kCL~-dPskRpSa~ELLkH   86 (547)
                      .||..|++ +|++|++|++.|+-
T Consensus       269 nlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  269 NLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHccCchhccCHHHHHHh
Confidence            99999999 69999999999865


No 409
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=96.57  E-value=0.0079  Score=57.18  Aligned_cols=91  Identities=27%  Similarity=0.339  Sum_probs=65.6

Q ss_pred             CCcccccc----cCCcccchHhHHHHHHHHHhCCCCCCCCCc---hHHHHHHHHhCCCC-Cc--cccCC----CHHHHHH
Q 008997            1 MAPEVYEE----EYNELVDIYSFGMCILEMVTFDYPYSECTH---PAQIYKKVISGKKP-EA--LFKVE----DPEVRQF   66 (547)
Q Consensus         1 MAPEVL~~----~Y~~kvDIWSlGVILyELLtG~~PF~g~s~---~~qI~~kIlsg~~P-~~--l~~~~----S~elkdL   66 (547)
                      +|||++..    .+....|+|++|++++++++|..||.....   .......+.....+ ..  .....    ...+.++
T Consensus       175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (384)
T COG0515         175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDL  254 (384)
T ss_pred             CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHH
Confidence            57888763    677899999999999999999999876543   34555555444432 11  11111    1578899


Q ss_pred             HHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           67 IEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        67 I~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                      +.+++. +|..|.+......++|...
T Consensus       255 ~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         255 LKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             HHHHHhcCchhcCCHHHHhhchHhhC
Confidence            999999 5999999998888866554


No 410
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.47  E-value=0.0017  Score=73.68  Aligned_cols=35  Identities=37%  Similarity=0.797  Sum_probs=31.7

Q ss_pred             CCccccc--ccCCcccchHhHHHHHHHHHhCCCCCCC
Q 008997            1 MAPEVYE--EEYNELVDIYSFGMCILEMVTFDYPYSE   35 (547)
Q Consensus         1 MAPEVL~--~~Y~~kvDIWSlGVILyELLtG~~PF~g   35 (547)
                      +|||++.  +.|+..||.|||||++|+.+||..||-.
T Consensus       190 LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  190 LHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            4899988  6799999999999999999999999864


No 411
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.15  E-value=0.0055  Score=66.72  Aligned_cols=83  Identities=30%  Similarity=0.569  Sum_probs=51.5

Q ss_pred             CCccccccc-----CC--cccchHhHHHHHHHHHh-----C-----CCCCCCCCc----hHHHHHHHHhCCC-CC--ccc
Q 008997            1 MAPEVYEEE-----YN--ELVDIYSFGMCILEMVT-----F-----DYPYSECTH----PAQIYKKVISGKK-PE--ALF   56 (547)
Q Consensus         1 MAPEVL~~~-----Y~--~kvDIWSlGVILyELLt-----G-----~~PF~g~s~----~~qI~~kIlsg~~-P~--~l~   56 (547)
                      |||||+.+.     |.  ..+||||||.++||++.     |     ++||.....    .+++.+-|.-.+. |.  ..|
T Consensus       387 MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW  466 (513)
T KOG2052|consen  387 MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW  466 (513)
T ss_pred             cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccc
Confidence            899999732     22  26899999999999985     2     478865321    2333333322222 22  122


Q ss_pred             cCCCHH---HHHHHHHHhc-ccCCCCCHHHHh
Q 008997           57 KVEDPE---VRQFIEKCLA-TVSSRLSARELL   84 (547)
Q Consensus        57 ~~~S~e---lkdLI~kCL~-dPskRpSa~ELL   84 (547)
                      .. .+.   +..+|+-||. .|..|.+|-.+.
T Consensus       467 ~s-~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  467 KS-DPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             cc-CHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            22 333   4467889999 699999976654


No 412
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=95.28  E-value=0.0063  Score=63.30  Aligned_cols=62  Identities=13%  Similarity=0.130  Sum_probs=39.7

Q ss_pred             cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCC
Q 008997            9 EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSR   77 (547)
Q Consensus         9 ~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskR   77 (547)
                      .|+.+.|.|++|+++|.|.||..||..... ......      .......++..++.||..+|. +|.+|
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~-~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSP-EADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGG-GSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCc-cccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            478899999999999999999999986421 111100      001112468899999999999 58776


No 413
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=95.18  E-value=0.0051  Score=69.97  Aligned_cols=91  Identities=25%  Similarity=0.310  Sum_probs=69.5

Q ss_pred             CCcccccc--cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCC--CCCccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYEE--EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGK--KPEALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~~--~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~--~P~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      +|||++.+  ...+..|+||+|+++..|++|..|+.........+.......  ....+|..++....+++.+++. +|.
T Consensus       196 ~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~  275 (601)
T KOG0590|consen  196 GAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPS  275 (601)
T ss_pred             CCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCch
Confidence            58898874  456789999999999999999999875332222222222221  1234567789999999999997 699


Q ss_pred             CCCCHHHHhcCCcccc
Q 008997           76 SRLSARELLTDPFLQI   91 (547)
Q Consensus        76 kRpSa~ELLkHPff~~   91 (547)
                      .|.+.+++..++|+..
T Consensus       276 ~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  276 NRLSIEELKLDNWLSS  291 (601)
T ss_pred             hccccccccccccccc
Confidence            9999999999999987


No 414
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=95.03  E-value=0.027  Score=61.83  Aligned_cols=81  Identities=26%  Similarity=0.477  Sum_probs=49.6

Q ss_pred             CCcccccccCC-------cccchHhHHHHHHHHHhCCC------------CCC---CC-CchHHHHHHHHhCCC-CC--c
Q 008997            1 MAPEVYEEEYN-------ELVDIYSFGMCILEMVTFDY------------PYS---EC-THPAQIYKKVISGKK-PE--A   54 (547)
Q Consensus         1 MAPEVL~~~Y~-------~kvDIWSlGVILyELLtG~~------------PF~---g~-s~~~qI~~kIlsg~~-P~--~   54 (547)
                      ||||||.+..+       ..+||||+|.++|||++.-.            ||.   |. ....++...|...+. |.  .
T Consensus       385 MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~  464 (534)
T KOG3653|consen  385 MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD  464 (534)
T ss_pred             cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh
Confidence            89999984332       25899999999999997422            232   10 112344444443332 21  1


Q ss_pred             cccC--CCHHHHHHHHHHhc-ccCCCCCHH
Q 008997           55 LFKV--EDPEVRQFIEKCLA-TVSSRLSAR   81 (547)
Q Consensus        55 l~~~--~S~elkdLI~kCL~-dPskRpSa~   81 (547)
                      .|..  .-.-+++.++-||- |+..|+|+.
T Consensus       465 ~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  465 AWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             hhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            1221  23457888999998 799999864


No 415
>PF12202 OSR1_C:  Oxidative-stress-responsive kinase 1 C terminal;  InterPro: IPR024678 Oxidative-stress-responsive kinase 1 (OSR1) is involved in the signalling cascade which activates Na/K/2Cl co-transporter during osmotic stress. This entry represents the CCT domain found in OSR1, STE20/SPS1-related kinase and in WNK activators []. This domain is found in eukaryotes, and is approximately 40 amino acids in length. There is a single completely conserved residue F that may be functionally important. ; PDB: 2V3S_A 2LRU_A.
Probab=94.67  E-value=0.03  Score=41.18  Aligned_cols=32  Identities=47%  Similarity=0.593  Sum_probs=24.5

Q ss_pred             eEEEeeeccccc------CcccccccccCCCCcHHHHH
Q 008997          184 IFLRLRIADKEG------RIRNIYFPFDIQTDTALSVA  215 (547)
Q Consensus       184 v~L~LRi~dk~g------~lr~i~fpFd~d~DTa~svA  215 (547)
                      |.|+||+.|...      ...+|.|.|+++.|++..||
T Consensus         1 i~l~Lrv~d~kK~~~k~ken~aI~F~F~~~~D~~e~VA   38 (38)
T PF12202_consen    1 INLRLRVRDPKKRKGKHKENEAIEFEFDLGKDTAEEVA   38 (38)
T ss_dssp             EEEEEEEC-TTSSSSS--TCEEEEEEEETTT--HHHHH
T ss_pred             CcEEEEEeccccccCccccCccEEEEEecCCCcccccC
Confidence            467888887766      56899999999999999986


No 416
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=94.42  E-value=0.01  Score=61.46  Aligned_cols=88  Identities=20%  Similarity=0.377  Sum_probs=56.1

Q ss_pred             Cccccc----c--cCCcccchHhHHHHHHHHHhCCCCCCCCCchHHH---HHHHHhCCCCC--ccccCCCHHHHHHHHHH
Q 008997            2 APEVYE----E--EYNELVDIYSFGMCILEMVTFDYPYSECTHPAQI---YKKVISGKKPE--ALFKVEDPEVRQFIEKC   70 (547)
Q Consensus         2 APEVL~----~--~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI---~~kIlsg~~P~--~l~~~~S~elkdLI~kC   70 (547)
                      |||++.    +  ..++..|+|.|||++|..++|.+||+......+-   +.+...+..+.  .....+++.+..+.++-
T Consensus       188 ~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~  267 (378)
T KOG1345|consen  188 APELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKS  267 (378)
T ss_pred             CcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHh
Confidence            566654    2  2467899999999999999999999853222222   22333333321  12345788999999999


Q ss_pred             hcc-cCCCC---CHHHHhcCCcc
Q 008997           71 LAT-VSSRL---SARELLTDPFL   89 (547)
Q Consensus        71 L~d-PskRp---Sa~ELLkHPff   89 (547)
                      |.. +.+|-   +++...+..|.
T Consensus       268 lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  268 LTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             cCCcccccchhHHHHHHHHHHHH
Confidence            984 88773   34444444443


No 417
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=93.14  E-value=0.056  Score=57.50  Aligned_cols=75  Identities=35%  Similarity=0.481  Sum_probs=49.1

Q ss_pred             CcccchHhHHHHHHHHHhCCCC-CCCCCc--hHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhcc-cCCCCCHHHHhcC
Q 008997           11 NELVDIYSFGMCILEMVTFDYP-YSECTH--PAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLAT-VSSRLSARELLTD   86 (547)
Q Consensus        11 ~~kvDIWSlGVILyELLtG~~P-F~g~s~--~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~d-PskRpSa~ELLkH   86 (547)
                      +..+|||+||++.++|..++.- -.+.+.  .......+.-+        .-...-++++.+||.. |..||++.+++.|
T Consensus       260 ~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~--------len~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  260 TGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG--------LENGLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             ccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee--------ccCccccCcCcccccCCCCCCcchhhhhcC
Confidence            4579999999999999988753 222110  01111111111        1123347889999995 9999999999999


Q ss_pred             CccccCC
Q 008997           87 PFLQIDD   93 (547)
Q Consensus        87 Pff~~~~   93 (547)
                      |.+-...
T Consensus       332 pllfeVh  338 (458)
T KOG1266|consen  332 PLLFEVH  338 (458)
T ss_pred             ceeeecc
Confidence            9775543


No 418
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=85.15  E-value=0.35  Score=55.55  Aligned_cols=91  Identities=19%  Similarity=0.136  Sum_probs=61.9

Q ss_pred             CCccccc-ccCCcccchHhHHHHHHHHH-hCCCCCCCCCchHHHHHHH-HhCCCC-CccccCCCHHHHHHHHHHhc-ccC
Q 008997            1 MAPEVYE-EEYNELVDIYSFGMCILEMV-TFDYPYSECTHPAQIYKKV-ISGKKP-EALFKVEDPEVRQFIEKCLA-TVS   75 (547)
Q Consensus         1 MAPEVL~-~~Y~~kvDIWSlGVILyELL-tG~~PF~g~s~~~qI~~kI-lsg~~P-~~l~~~~S~elkdLI~kCL~-dPs   75 (547)
                      .|||++. ..-+.++|++|+|+.+|.+. .|+.-+.+... ...+... ...... ......++.++++-+.++|. ++.
T Consensus       176 ~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~  254 (700)
T KOG2137|consen  176 LAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSA  254 (700)
T ss_pred             ccchhhccccccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcc
Confidence            4788877 45667999999999999888 45555544321 1111111 111111 11224578999999999998 689


Q ss_pred             CCCCHHHHhcCCccccC
Q 008997           76 SRLSARELLTDPFLQID   92 (547)
Q Consensus        76 kRpSa~ELLkHPff~~~   92 (547)
                      .||++..++..+||...
T Consensus       255 ~rp~~~~l~~~~ff~D~  271 (700)
T KOG2137|consen  255 VRPTLDLLLSIPFFSDP  271 (700)
T ss_pred             cCcchhhhhcccccCCc
Confidence            99999999999999864


No 419
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=82.12  E-value=0.91  Score=51.06  Aligned_cols=90  Identities=20%  Similarity=0.181  Sum_probs=63.0

Q ss_pred             CCcccccccCCcccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCCC
Q 008997            1 MAPEVYEEEYNELVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRLS   79 (547)
Q Consensus         1 MAPEVL~~~Y~~kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRpS   79 (547)
                      |+||++.+-|+...||+++|.+..+..++..+.....+.  -+..+..+..+..+....+.++...+..++. ++..|++
T Consensus       295 ~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~--~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~  372 (524)
T KOG0601|consen  295 AAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS--SWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLT  372 (524)
T ss_pred             eChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC--CccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhH
Confidence            578888888999999999999999998887655432111  1122223334444444445666666667777 5999999


Q ss_pred             HHHHhcCCccccC
Q 008997           80 ARELLTDPFLQID   92 (547)
Q Consensus        80 a~ELLkHPff~~~   92 (547)
                      ++.+++|+++...
T Consensus       373 ~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  373 AQILTALNVIHSK  385 (524)
T ss_pred             HHHHhccccccch
Confidence            9999999999753


No 420
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=78.87  E-value=0.53  Score=43.77  Aligned_cols=92  Identities=13%  Similarity=0.121  Sum_probs=57.1

Q ss_pred             hhhhhhhhhccCCCCCCCcccccccCCCCCCCCcccccchhhhccccccccccccccccCcc--ccccceEEEeeec-c-
Q 008997          117 SLYGIYHSNSSSNNGCGHYIGYDTENGLDYHPHEFQESEIDLFTCQEDEHLTNFDISIKGKR--REDDGIFLRLRIA-D-  192 (547)
Q Consensus       117 p~~~l~~~f~~lD~d~sG~ls~de~l~~~l~~~e~e~se~el~~~~e~~~s~~~di~l~G~~--~dd~~v~L~LRi~-d-  192 (547)
                      ...++...|+.+|.+++|.++..+ +...+...+...++.++......     .+...+|.+  .++..+.-+.... . 
T Consensus         6 ~~~el~~~F~~fD~d~~G~i~~~e-l~~~lr~lg~~~t~~el~~~~~~-----~D~dg~g~I~~~eF~~l~~~~~~~~~~   79 (151)
T KOG0027|consen    6 QILELKEAFQLFDKDGDGKISVEE-LGAVLRSLGQNPTEEELRDLIKE-----IDLDGDGTIDFEEFLDLMEKLGEEKTD   79 (151)
T ss_pred             HHHHHHHHHHHHCCCCCCcccHHH-HHHHHHHcCCCCCHHHHHHHHHH-----hCCCCCCeEcHHHHHHHHHhhhccccc
Confidence            356788899999999999998888 56666666766666666544332     233345554  2333322211111 1 


Q ss_pred             ---cccCcccccccccCCCCcHHHH
Q 008997          193 ---KEGRIRNIYFPFDIQTDTALSV  214 (547)
Q Consensus       193 ---k~g~lr~i~fpFd~d~DTa~sv  214 (547)
                         ....++.+|-.||.++|..++.
T Consensus        80 ~~~~~~el~eaF~~fD~d~~G~Is~  104 (151)
T KOG0027|consen   80 EEASSEELKEAFRVFDKDGDGFISA  104 (151)
T ss_pred             ccccHHHHHHHHHHHccCCCCcCcH
Confidence               1236789999999999954443


No 421
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=78.43  E-value=0.27  Score=47.21  Aligned_cols=97  Identities=18%  Similarity=0.192  Sum_probs=61.3

Q ss_pred             CchhhhhhhhhhhhhccCCCCCCCcccccccCCCCCCCCcccccchhhhccccccccccccccccCcc--ccccceE-EE
Q 008997          111 SPLLRQSLYGIYHSNSSSNNGCGHYIGYDTENGLDYHPHEFQESEIDLFTCQEDEHLTNFDISIKGKR--REDDGIF-LR  187 (547)
Q Consensus       111 ~~l~~~p~~~l~~~f~~lD~d~sG~ls~de~l~~~l~~~e~e~se~el~~~~e~~~s~~~di~l~G~~--~dd~~v~-L~  187 (547)
                      ..+.+..+.++++.|+.+|.+++|.|++.+ +...+.-.+...++.++-.+.+...     . ..|.+  .++.++. ..
T Consensus        12 ~~~t~~qi~~lkeaF~l~D~d~~G~I~~~e-l~~ilr~lg~~~s~~ei~~l~~~~d-----~-~~~~idf~~Fl~~ms~~   84 (160)
T COG5126          12 TQLTEEQIQELKEAFQLFDRDSDGLIDRNE-LGKILRSLGFNPSEAEINKLFEEID-----A-GNETVDFPEFLTVMSVK   84 (160)
T ss_pred             ccCCHHHHHHHHHHHHHhCcCCCCCCcHHH-HHHHHHHcCCCCcHHHHHHHHHhcc-----C-CCCccCHHHHHHHHHHH
Confidence            345556678899999999999999999988 4444555566666665554443322     1 22222  2222111 11


Q ss_pred             eeecccccCcccccccccCCCCcHHHH
Q 008997          188 LRIADKEGRIRNIYFPFDIQTDTALSV  214 (547)
Q Consensus       188 LRi~dk~g~lr~i~fpFd~d~DTa~sv  214 (547)
                      +.-.++...++.+|--||.+.|..+++
T Consensus        85 ~~~~~~~Eel~~aF~~fD~d~dG~Is~  111 (160)
T COG5126          85 LKRGDKEEELREAFKLFDKDHDGYISI  111 (160)
T ss_pred             hccCCcHHHHHHHHHHhCCCCCceecH
Confidence            112245566889999999999977766


No 422
>PF00036 EF-hand_1:  EF hand;  InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=69.39  E-value=1.4  Score=30.28  Aligned_cols=21  Identities=5%  Similarity=0.082  Sum_probs=18.6

Q ss_pred             hhhhhhccCCCCCCCcccccc
Q 008997          120 GIYHSNSSSNNGCGHYIGYDT  140 (547)
Q Consensus       120 ~l~~~f~~lD~d~sG~ls~de  140 (547)
                      ++..+|+.+|+|++|.|+++|
T Consensus         1 E~~~~F~~~D~d~dG~I~~~E   21 (29)
T PF00036_consen    1 ELKEAFREFDKDGDGKIDFEE   21 (29)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHH
Confidence            367789999999999999987


No 423
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=63.22  E-value=6.9  Score=35.29  Aligned_cols=27  Identities=37%  Similarity=0.565  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHhc-ccCCCCCHHHHhcCC
Q 008997           61 PEVRQFIEKCLA-TVSSRLSARELLTDP   87 (547)
Q Consensus        61 ~elkdLI~kCL~-dPskRpSa~ELLkHP   87 (547)
                      ..+.+++.+|+. +|.+||++.++++|+
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            678899999998 699999999999874


No 424
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=59.42  E-value=0.71  Score=44.39  Aligned_cols=93  Identities=14%  Similarity=0.138  Sum_probs=55.5

Q ss_pred             hhhhhhhhhhccCCCCCCCcccccccCCCCCCCCcccccchhhhccccccccccccccccCccc--cccce-EEEeeecc
Q 008997          116 QSLYGIYHSNSSSNNGCGHYIGYDTENGLDYHPHEFQESEIDLFTCQEDEHLTNFDISIKGKRR--EDDGI-FLRLRIAD  192 (547)
Q Consensus       116 ~p~~~l~~~f~~lD~d~sG~ls~de~l~~~l~~~e~e~se~el~~~~e~~~s~~~di~l~G~~~--dd~~v-~L~LRi~d  192 (547)
                      ....+++..|..++++.+|.|+..| +..+....|.+....++.....+     .+-...|.+.  ++..+ +-.+-..|
T Consensus        30 ~q~q~i~e~f~lfd~~~~g~iD~~E-L~vAmralGFE~~k~ei~kll~d-----~dk~~~g~i~fe~f~~~mt~k~~e~d  103 (172)
T KOG0028|consen   30 EQKQEIKEAFELFDPDMAGKIDVEE-LKVAMRALGFEPKKEEILKLLAD-----VDKEGSGKITFEDFRRVMTVKLGERD  103 (172)
T ss_pred             HHHhhHHHHHHhhccCCCCcccHHH-HHHHHHHcCCCcchHHHHHHHHh-----hhhccCceechHHHHHHHHHHHhccC
Confidence            3346788889999999999999998 55566666777655554332222     2223345542  22211 22222224


Q ss_pred             cccCcccccccccCCCCcHHHH
Q 008997          193 KEGRIRNIYFPFDIQTDTALSV  214 (547)
Q Consensus       193 k~g~lr~i~fpFd~d~DTa~sv  214 (547)
                      ....|..+|-.||.+.+.+++.
T Consensus       104 t~eEi~~afrl~D~D~~Gkis~  125 (172)
T KOG0028|consen  104 TKEEIKKAFRLFDDDKTGKISQ  125 (172)
T ss_pred             cHHHHHHHHHcccccCCCCcCH
Confidence            4445677888898888876554


No 425
>PF13202 EF-hand_5:  EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=58.68  E-value=2.8  Score=27.73  Aligned_cols=20  Identities=5%  Similarity=0.106  Sum_probs=16.9

Q ss_pred             hhhhhccCCCCCCCcccccc
Q 008997          121 IYHSNSSSNNGCGHYIGYDT  140 (547)
Q Consensus       121 l~~~f~~lD~d~sG~ls~de  140 (547)
                      |...|+.+|.|++|.|+.+|
T Consensus         1 l~~~F~~~D~d~DG~is~~E   20 (25)
T PF13202_consen    1 LKDAFQQFDTDGDGKISFEE   20 (25)
T ss_dssp             HHHHHHHHTTTSSSEEEHHH
T ss_pred             CHHHHHHHcCCCCCcCCHHH
Confidence            34578899999999999877


No 426
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=57.37  E-value=11  Score=43.21  Aligned_cols=58  Identities=29%  Similarity=0.487  Sum_probs=43.8

Q ss_pred             ceEEEeeecccc--cC--cccccccccCCCCcHHHHHHHHHHccCCCcccHHHHHHHHHHHH
Q 008997          183 GIFLRLRIADKE--GR--IRNIYFPFDIQTDTALSVATEMVSELDITDQDVTKIAEIIDSEI  240 (547)
Q Consensus       183 ~v~L~LRi~dk~--g~--lr~i~fpFd~d~DTa~svA~EMV~Eldi~~qd~~~IaemI~~Ei  240 (547)
                      .+.|+++..+..  ++  .+.|.|-|+++.|++.+||+||+.+..+.+.|...++.+|..-+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~n~i~~~~~~~~D~~e~v~~em~~~~~~~edd~~~v~r~~~~~~  379 (632)
T KOG0584|consen  318 ALSLSLRDEDGKKNKRPKANAIQFDYNLNTDESEEVAQEMVEEEIVSEDDSREVARLLKDTV  379 (632)
T ss_pred             cccccccccchhhcCCcccccccceeecCCCchhHHHHHHHHhccCCcchHHHHHHHhccce
Confidence            344455555333  11  25789999999999999999999999999999888877776544


No 427
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=56.03  E-value=2.3  Score=40.83  Aligned_cols=87  Identities=14%  Similarity=0.096  Sum_probs=55.0

Q ss_pred             hhhhhhhhhhhhhccCCCCCCCcccccccCCCCCCCCcccccchhhhccccccccccccccccCccccccceEEE-----
Q 008997          113 LLRQSLYGIYHSNSSSNNGCGHYIGYDTENGLDYHPHEFQESEIDLFTCQEDEHLTNFDISIKGKRREDDGIFLR-----  187 (547)
Q Consensus       113 l~~~p~~~l~~~f~~lD~d~sG~ls~de~l~~~l~~~e~e~se~el~~~~e~~~s~~~di~l~G~~~dd~~v~L~-----  187 (547)
                      +-+..+.++++.|+.+|.|.+|-|.... ++..+...|...++.+|-..+... +.|..+          +++|.     
T Consensus        26 f~q~QIqEfKEAF~~mDqnrDG~IdkeD-L~d~~aSlGk~~~d~elDaM~~Ea-~gPINf----------t~FLTmfGek   93 (171)
T KOG0031|consen   26 FDQSQIQEFKEAFNLMDQNRDGFIDKED-LRDMLASLGKIASDEELDAMMKEA-PGPINF----------TVFLTMFGEK   93 (171)
T ss_pred             hhHHHHHHHHHHHHHHhccCCCcccHHH-HHHHHHHcCCCCCHHHHHHHHHhC-CCCeeH----------HHHHHHHHHH
Confidence            4455688999999999999999998764 555555566555555444333222 222221          12222     


Q ss_pred             eeecccccCcccccccccCCCCcH
Q 008997          188 LRIADKEGRIRNIYFPFDIQTDTA  211 (547)
Q Consensus       188 LRi~dk~g~lr~i~fpFd~d~DTa  211 (547)
                      |.=.|++.-|.++|--||.++...
T Consensus        94 L~gtdpe~~I~~AF~~FD~~~~G~  117 (171)
T KOG0031|consen   94 LNGTDPEEVILNAFKTFDDEGSGK  117 (171)
T ss_pred             hcCCCHHHHHHHHHHhcCccCCCc
Confidence            223366777899999999886643


No 428
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=49.51  E-value=35  Score=38.22  Aligned_cols=72  Identities=18%  Similarity=0.374  Sum_probs=47.7

Q ss_pred             CCcccchHhHHHHHHHHHhC-CCCCCCCCc----hHHHHHHHHhCC-----------CCC---ccccCCCHHHHHHHHHH
Q 008997           10 YNELVDIYSFGMCILEMVTF-DYPYSECTH----PAQIYKKVISGK-----------KPE---ALFKVEDPEVRQFIEKC   70 (547)
Q Consensus        10 Y~~kvDIWSlGVILyELLtG-~~PF~g~s~----~~qI~~kIlsg~-----------~P~---~l~~~~S~elkdLI~kC   70 (547)
                      -+...|.+.+|+++++++.| +.||.|..-    +.-.-..|..|.           +|.   .++...++.+..|..+|
T Consensus       198 r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qa  277 (637)
T COG4248         198 RTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQA  277 (637)
T ss_pred             CCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHH
Confidence            45678999999999999986 899986321    000011232222           111   12345789999999999


Q ss_pred             hcc---cCCCCCHH
Q 008997           71 LAT---VSSRLSAR   81 (547)
Q Consensus        71 L~d---PskRpSa~   81 (547)
                      +.+   +.-||+++
T Consensus       278 F~~~~~~~~RP~a~  291 (637)
T COG4248         278 FTESGVATPRPTAK  291 (637)
T ss_pred             hcccCCCCCCCCHH
Confidence            984   67899965


No 429
>PF13405 EF-hand_6:  EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=33.80  E-value=12  Score=25.41  Aligned_cols=20  Identities=5%  Similarity=0.202  Sum_probs=16.3

Q ss_pred             hhhhhccCCCCCCCcccccc
Q 008997          121 IYHSNSSSNNGCGHYIGYDT  140 (547)
Q Consensus       121 l~~~f~~lD~d~sG~ls~de  140 (547)
                      +...|..+|.+++|.|+.+|
T Consensus         2 l~~~F~~~D~d~dG~I~~~e   21 (31)
T PF13405_consen    2 LREAFKMFDKDGDGFIDFEE   21 (31)
T ss_dssp             HHHHHHHH-TTSSSEEEHHH
T ss_pred             HHHHHHHHCCCCCCcCcHHH
Confidence            56778899999999998877


No 430
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=30.46  E-value=1.6e+02  Score=30.41  Aligned_cols=29  Identities=21%  Similarity=0.243  Sum_probs=25.0

Q ss_pred             cCCcccchHhHHHHHHHHHhCCCCCCCCC
Q 008997            9 EYNELVDIYSFGMCILEMVTFDYPYSECT   37 (547)
Q Consensus         9 ~Y~~kvDIWSlGVILyELLtG~~PF~g~s   37 (547)
                      ..+.+-|+||++-++.+++.|..||.+..
T Consensus       213 e~~r~DDles~~Y~l~el~~g~LPW~~~~  241 (322)
T KOG1164|consen  213 EQGRRDDLESLFYMLLELLKGSLPWEALE  241 (322)
T ss_pred             ccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence            45678899999999999999999997654


No 431
>PF04855 SNF5:  SNF5 / SMARCB1 / INI1;  InterPro: IPR006939 SNF5 is a component of the yeast SWI/SNF complex, which is an ATP-dependent nucleosome-remodelling complex that regulates the transcription of a subset of yeast genes. SNF5 is a key component of all SWI/SNF-class complexes characterised so far []. This family consists of the conserved region of SNF5, including a direct repeat motif. SNF5 is essential for the assembly promoter targeting and chromatin remodelling activity of the SWI-SNF complex []. SNF5 is also known as SMARCB1, for SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily b, member 1, and also INI1 for integrase interactor 1. Loss-of function mutations in SNF5 are thought to contribute to oncogenesis in malignant rhabdoid tumours (MRTs) [].; GO: 0006338 chromatin remodeling, 0000228 nuclear chromosome
Probab=27.59  E-value=1.6e+02  Score=30.33  Aligned_cols=65  Identities=18%  Similarity=0.280  Sum_probs=46.0

Q ss_pred             ccceEEEeeecccccCcccccccccCCC--CcHHHHHHHHHHccCCCcccHHHHHHHHHHHHHhhCCC
Q 008997          181 DDGIFLRLRIADKEGRIRNIYFPFDIQT--DTALSVATEMVSELDITDQDVTKIAEIIDSEIASLVPE  246 (547)
Q Consensus       181 d~~v~L~LRi~dk~g~lr~i~fpFd~d~--DTa~svA~EMV~Eldi~~qd~~~IaemI~~Ei~~~VP~  246 (547)
                      +..|.+.|.|.-. ++.-.-.|-.|+..  .+++..|..|+.++++...+.+.||-.|.+.+....-.
T Consensus       113 ~~rv~I~LdI~ig-~~~l~DqFEWDL~~~~~~PE~FA~~~c~dLgL~~Ef~~aIahsIrEq~~~~kK~  179 (244)
T PF04855_consen  113 DLRVIIKLDITIG-NHLLVDQFEWDLSNPPNSPEEFARVLCADLGLPGEFVPAIAHSIREQLLKYKKE  179 (244)
T ss_pred             ceEEEEEEEEEEC-CEEEEEEEEecCCCCCCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            3344455544321 11233466677654  48999999999999999999999999999999776433


No 432
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=25.21  E-value=67  Score=40.02  Aligned_cols=68  Identities=29%  Similarity=0.478  Sum_probs=46.3

Q ss_pred             ccchHhHHHHHHHHHhCCCCCCCCCchHHHHHHHHhCCCCCccccCCCHHHHHHHHHHhc-ccCCCCCHHHHhcCCcccc
Q 008997           13 LVDIYSFGMCILEMVTFDYPYSECTHPAQIYKKVISGKKPEALFKVEDPEVRQFIEKCLA-TVSSRLSARELLTDPFLQI   91 (547)
Q Consensus        13 kvDIWSlGVILyELLtG~~PF~g~s~~~qI~~kIlsg~~P~~l~~~~S~elkdLI~kCL~-dPskRpSa~ELLkHPff~~   91 (547)
                      ..|+|.+|.....+..|..+-.-   .. ....++        .........+++.+|+. ++++|+++.+++.|+|.+.
T Consensus       372 ~~dL~~lgll~~~~~~~~~i~~~---~~-~~~~~l--------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  372 LTDLWCLGLLLLQLSQGEDISEK---SA-VPVSLL--------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             hhHHHHHHHHHhhhhhcCccccc---cc-chhhhh--------ccccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence            46999999999999887543221   11 111111        11112266788899998 5999999999999999875


Q ss_pred             C
Q 008997           92 D   92 (547)
Q Consensus        92 ~   92 (547)
                      .
T Consensus       440 ~  440 (1351)
T KOG1035|consen  440 P  440 (1351)
T ss_pred             c
Confidence            3


Done!