Your job contains 1 sequence.
>009000
MNFSLCLLGMGLEERVAESCINGHKADCAWTVSVHTFSDITNISPVVFLYLLKECYIHGT
CKATRKFRALQQQVSQALCNSPEPGPATFIVRCLYVLPIFGVYSEGFSHLIISALRRHQK
TTVNSADSTQAKEIAAYLFLDITGGFVDHDEKLMVKILEAFDVRLTDIEKAITQLKAQNE
HRFDTAKTVIEQYIFAMIDSQSYMTAVSLLEHFSIRQSGESFLLKMIQNKEFKAAEKWAT
FMGKPILLKRLAEKACWDIAEAKTKGDKRLLEYLVYLAMEAGYSEKVDELCERYSLEGFL
KTREPEAGFVHSRFLHLKELVVEDIIWVDEVDGLHKAICHIEGCKVVGIDCEWKPNYVKG
CKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQL
AHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ
LEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVSHMDNPKKSKKRPTIKKET
ESGANYH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009000
(547 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BWV5 - symbol:EXD3 "Uncharacterized protein" ... 141 2.8e-13 2
ZFIN|ZDB-GENE-091204-349 - symbol:exd3 "exonuclease 3'-5'... 129 2.0e-10 3
TAIR|locus:2119525 - symbol:WRNEXO "Werner syndrome-like ... 171 2.7e-10 1
UNIPROTKB|F1RVW3 - symbol:EXD3 "Uncharacterized protein" ... 164 1.8e-08 1
UNIPROTKB|E1BEQ0 - symbol:EXD2 "Uncharacterized protein" ... 162 1.9e-08 1
UNIPROTKB|F1Q045 - symbol:EXD3 "Uncharacterized protein" ... 163 2.3e-08 1
RGD|1564788 - symbol:Wrn "Werner syndrome, RecQ helicase-... 164 3.4e-08 1
WB|WBGene00013256 - symbol:Y57A10A.13 species:6239 "Caeno... 112 4.4e-08 2
UNIPROTKB|G3X7J6 - symbol:G3X7J6 "Uncharacterized protein... 159 4.9e-08 1
UNIPROTKB|F1NAR0 - symbol:F1NAR0 "Uncharacterized protein... 162 5.3e-08 1
UNIPROTKB|E1BXG2 - symbol:EXD2 "Uncharacterized protein" ... 157 6.5e-08 1
UNIPROTKB|F1S4B8 - symbol:EXD2 "Uncharacterized protein" ... 156 8.4e-08 1
TAIR|locus:2152871 - symbol:AT5G24340 species:3702 "Arabi... 153 1.3e-07 1
ZFIN|ZDB-GENE-030131-6387 - symbol:exd2 "exonuclease 3'-5... 153 1.8e-07 1
UNIPROTKB|Q9NVH0 - symbol:EXD2 "Exonuclease 3'-5' domain-... 151 2.9e-07 1
UNIPROTKB|J9NWB3 - symbol:EXD2 "Uncharacterized protein" ... 148 5.6e-07 1
UNIPROTKB|E2QXX4 - symbol:EXD2 "Uncharacterized protein" ... 148 6.3e-07 1
MGI|MGI:109635 - symbol:Wrn "Werner syndrome homolog (hum... 152 6.5e-07 1
DICTYBASE|DDB_G0278593 - symbol:exdl2B "3'-5' exonuclease... 148 7.2e-07 1
FB|FBgn0037901 - symbol:CG6744 species:7227 "Drosophila m... 147 7.3e-07 1
RGD|1311087 - symbol:Exd2 "exonuclease 3'-5' domain conta... 146 1.1e-06 1
UNIPROTKB|Q14191 - symbol:WRN "Werner syndrome ATP-depend... 149 1.4e-06 1
UNIPROTKB|F1PZR2 - symbol:WRN "Uncharacterized protein" s... 148 1.7e-06 1
ZFIN|ZDB-GENE-070702-2 - symbol:wrn "Werner syndrome" spe... 148 1.8e-06 1
UNIPROTKB|F1PZR3 - symbol:WRN "Uncharacterized protein" s... 148 1.9e-06 1
UNIPROTKB|F1PUF8 - symbol:WRN "Uncharacterized protein" s... 148 2.0e-06 1
GENEDB_PFALCIPARUM|PF14_0112 - symbol:PF14_0112 "POM1, pu... 147 2.8e-06 2
UNIPROTKB|Q8ILY1 - symbol:POM1 "Pfprex" species:36329 "Pl... 147 2.8e-06 2
UNIPROTKB|F1RX70 - symbol:WRN "Uncharacterized protein" s... 144 4.8e-06 1
UNIPROTKB|I3LC91 - symbol:WRN "Uncharacterized protein" s... 144 5.2e-06 1
UNIPROTKB|B3LWP6 - symbol:WRNexo "Werner Syndrome-like ex... 135 6.4e-06 1
UNIPROTKB|B4K934 - symbol:WRNexo "Werner Syndrome-like ex... 134 7.0e-06 1
UNIPROTKB|B4JF25 - symbol:WRNexo "Werner Syndrome-like ex... 133 9.2e-06 1
UNIPROTKB|Q8N9H8 - symbol:EXD3 "Probable exonuclease mut-... 139 9.5e-06 1
TIGR_CMR|SPO_0083 - symbol:SPO_0083 "exonuclease, putativ... 124 2.0e-05 1
UNIPROTKB|O93530 - symbol:wrn "Werner syndrome ATP-depend... 138 2.2e-05 1
UNIPROTKB|B4N9D3 - symbol:WRNexo "Werner Syndrome-like ex... 133 2.5e-05 2
FB|FBgn0032924 - symbol:Nbr "Nibbler" species:7227 "Droso... 100 3.2e-05 3
UNIPROTKB|B4G5C9 - symbol:WRNexo "Werner Syndrome-like ex... 128 3.8e-05 1
UNIPROTKB|Q299L3 - symbol:WRNexo "Werner Syndrome-like ex... 128 3.8e-05 1
DICTYBASE|DDB_G0278079 - symbol:exdl2A "3'-5' exonuclease... 130 7.0e-05 1
GENEDB_PFALCIPARUM|PFA0290w - symbol:PFA0290w "DNA bindin... 127 7.4e-05 1
UNIPROTKB|Q8I282 - symbol:PFA_0290w "DNA binding protein,... 127 7.4e-05 1
TIGR_CMR|SO_2580 - symbol:SO_2580 "ribonuclease D" specie... 124 0.00011 1
UNIPROTKB|E1BEE6 - symbol:WRN "Uncharacterized protein" s... 131 0.00012 1
ASPGD|ASPL0000027694 - symbol:AN5680 species:162425 "Emer... 122 0.00014 1
TIGR_CMR|APH_1098 - symbol:APH_1098 "3''-5'' exonuclease ... 117 0.00015 1
TIGR_CMR|ECH_0300 - symbol:ECH_0300 "putative ribonucleas... 123 0.00016 1
DICTYBASE|DDB_G0282387 - symbol:DDB_G0282387 "3'-5' exonu... 86 0.00017 3
UNIPROTKB|B4I298 - symbol:WRNexo "Werner Syndrome-like ex... 122 0.00018 1
UNIPROTKB|B4PLB3 - symbol:WRNexo "Werner Syndrome-like ex... 122 0.00018 1
UNIPROTKB|B4QUF6 - symbol:WRNexo "Werner Syndrome-like ex... 122 0.00018 1
TAIR|locus:504955936 - symbol:AT2G32415 species:3702 "Ara... 127 0.00019 1
UNIPROTKB|B4M401 - symbol:WRNexo "Werner Syndrome-like ex... 121 0.00020 1
WB|WBGene00003504 - symbol:mut-7 species:6239 "Caenorhabd... 127 0.00020 1
UNIPROTKB|P34607 - symbol:mut-7 "Probable exonuclease mut... 127 0.00020 1
TIGR_CMR|GSU_0443 - symbol:GSU_0443 "ribonuclease D, puta... 121 0.00026 1
FB|FBgn0038608 - symbol:WRNexo "WRN exonuclease" species:... 119 0.00038 1
MGI|MGI:1922485 - symbol:Exd2 "exonuclease 3'-5' domain c... 119 0.00066 1
>UNIPROTKB|E1BWV5 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AADN02026991 EMBL:AADN02026982 EMBL:AADN02026983
EMBL:AADN02026965 EMBL:AADN02026966 EMBL:AADN02026967
EMBL:AADN02026968 EMBL:AADN02026969 EMBL:AADN02026970
EMBL:AADN02026971 EMBL:AADN02026972 EMBL:AADN02026973
EMBL:AADN02026974 EMBL:AADN02026975 EMBL:AADN02026976
EMBL:AADN02026977 EMBL:AADN02026978 EMBL:AADN02026979
EMBL:AADN02026980 EMBL:AADN02026981 EMBL:AADN02026984
EMBL:AADN02026985 EMBL:AADN02026986 EMBL:AADN02026987
EMBL:AADN02026988 EMBL:AADN02026989 EMBL:AADN02026990
EMBL:AADN02026992 EMBL:AADN02026993 EMBL:AADN02026994
EMBL:AADN02039946 IPI:IPI00573845 ProteinModelPortal:E1BWV5
Ensembl:ENSGALT00000014570 Uniprot:E1BWV5
Length = 725
Score = 141 (54.7 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 444 KEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 503
++P+ GLS L + +LG L+KT + SNWE+RPL + Q+ YAA DA LL+++ + C
Sbjct: 510 RQPEKGLSLLVQHVLGKPLDKTEQMSNWEKRPLREEQILYAASDAYCLLEVYEKL--CKD 567
Query: 504 PTDVSEGHDKIE 515
P D E
Sbjct: 568 PESFGLSSDLTE 579
Score = 116 (45.9 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 345 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVP-----DVLDSCLTR 399
++VGID EW+P++ K +VS++Q+A + VF+ DL +L E + L + R
Sbjct: 389 QIVGIDMEWRPSFGMVGKP-RVSLLQLAVRDEVFLLDLPRLLEQAEVKGEKEKLPHFIQR 447
Query: 400 ILQSPGILKLGYNFQCDIKQLAHSYGELECF-KHYEMLLDIQNVFK 444
+ I KLGY D+ LA + L+ K + ++D+ + K
Sbjct: 448 LYSDATITKLGYGMSGDLSSLAATCSTLKGMDKQSQSVVDLLTIDK 493
>ZFIN|ZDB-GENE-091204-349 [details] [associations]
symbol:exd3 "exonuclease 3'-5' domain containing 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-091204-349 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 EMBL:BX005370 IPI:IPI00491719
Ensembl:ENSDART00000092011 Uniprot:E7EY45
Length = 861
Score = 129 (50.5 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 449 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
GLS L +++LG LNK+ + SNWE+RPL +QL YAA DA LL I+
Sbjct: 517 GLSLLVQQVLGKPLNKSEQLSNWERRPLRTSQLRYAAADAYCLLDIY 563
Score = 107 (42.7 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 405
VVG+D EW+ + +V+++Q+A + VF+ DL A + +L
Sbjct: 394 VVGMDMEWRAGFGT-VSSQRVALIQLAVQDQVFLLDLCAHAISHHSTTVDFIRALLSDKK 452
Query: 406 ILKLGYNFQCDIKQLAHSYGEL--ECFKHYEMLLDIQNVFKE 445
ILKLGY D++ L ++ +L E K E +LD+ + +E
Sbjct: 453 ILKLGYGMSGDLRSLVSTWPDLREEPMK-MEGVLDLLLIHQE 493
Score = 39 (18.8 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 229 NKEFKAAEKWATF-MGKPILLKRLAEKACWDIAEAKTKGDKRLLEYLVYLAME 280
N +K F M K + K ++E+ D +A +GD L LV L ++
Sbjct: 251 NSVYKRKSDSLRFLMYKTFVEKGMSEENWRDHVQAMIEGDLELQVQLVQLLVK 303
>TAIR|locus:2119525 [details] [associations]
symbol:WRNEXO "Werner syndrome-like exonuclease"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA;ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL035528 EMBL:AL161537
EMBL:AJ404476 EMBL:AF531179 EMBL:BT010908 EMBL:AY530745
IPI:IPI00525961 IPI:IPI00547001 PIR:T05256 RefSeq:NP_193123.2
RefSeq:NP_974543.1 UniGene:At.2728 UniGene:At.33330
UniGene:At.45865 ProteinModelPortal:Q84LH3 SMR:Q84LH3 IntAct:Q84LH3
STRING:Q84LH3 EnsemblPlants:AT4G13870.2 GeneID:827021
KEGG:ath:AT4G13870 TAIR:At4g13870 eggNOG:NOG266861
HOGENOM:HOG000240617 InParanoid:Q84LH3 OMA:ICIDNDA PhylomeDB:Q84LH3
ProtClustDB:CLSN2690907 Genevestigator:Q84LH3 Uniprot:Q84LH3
Length = 288
Score = 171 (65.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 50/151 (33%), Positives = 75/151 (49%)
Query: 343 GCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAED-VPDVLDSCLTRIL 401
G VG+D EW+P++ KG KV+ +QI D D++ + +P L ++
Sbjct: 126 GIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYC--DVMHIFHSGIPQSLQ----HLI 179
Query: 402 QSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQN--VFKEPKGGLSGLAEKILG 459
+ ++K+G D +L H YG K E L D+ N + + K GL+ L E ++
Sbjct: 180 EDSTLVKVGIGIDGDSVKLFHDYGV--SIKDVEDLSDLANQKIGGDKKWGLASLTETLVC 237
Query: 460 AGLNKTRRN--SNWEQRPLSQNQLEYAALDA 488
L K R NWE PLS+ QL+YAA DA
Sbjct: 238 KELLKPNRIRLGNWEFYPLSKQQLQYAATDA 268
>UNIPROTKB|F1RVW3 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 OMA:QENWADH EMBL:CU928955
Ensembl:ENSSSCT00000006434 Uniprot:F1RVW3
Length = 863
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 44/131 (33%), Positives = 67/131 (51%)
Query: 390 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE--- 445
P ++R+L P I KLGY D++ L S L + K LD+ V K+
Sbjct: 440 PQAFSQLVSRLLADPSITKLGYGMAGDLRSLGASCPALAQAQKQLRGSLDLLQVHKQLRV 499
Query: 446 ---PKGGLSG---------LAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQ 493
P G+ G L +++LG L+KT++ SNW++RPL + QL YAA DA LL+
Sbjct: 500 VDAPAPGVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEEQLVYAAADAYCLLE 559
Query: 494 IFHHVRSCSQP 504
++ + C +P
Sbjct: 560 VYWAL--CREP 568
Score = 134 (52.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 345 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSCLTRI 400
+VV +D EW+P++ G + + S+MQ+A + VF+ DL +L P ++R+
Sbjct: 392 QVVSVDLEWRPSFGVGGRP-QASLMQVAVEGRVFLLDLPQLLSPARGQEPQAFSQLVSRL 450
Query: 401 LQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE------PKGGLSGL 453
L P I KLGY D++ L S L + K LD+ V K+ P G+ G
Sbjct: 451 LADPSITKLGYGMAGDLRSLGASCPALAQAQKQLRGSLDLLQVHKQLRVVDAPAPGVDGA 510
Query: 454 A 454
A
Sbjct: 511 A 511
>UNIPROTKB|E1BEQ0 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:DAAA02029492 IPI:IPI00714556
RefSeq:XP_002691029.1 RefSeq:XP_587937.2 ProteinModelPortal:E1BEQ0
Ensembl:ENSBTAT00000013255 GeneID:539532 KEGG:bta:539532
NextBio:20878052 Uniprot:E1BEQ0
Length = 628
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 56/193 (29%), Positives = 93/193 (48%)
Query: 341 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 398
IE V+GIDCEW + +G K + +S++Q+AS + L++L + + L L
Sbjct: 106 IEDFPVLGIDCEWVNS--EG-KASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLL 160
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYGELE--CFKHYEMLLDIQNVFKEPKGGLSGLAEK 456
IL ILK+G D +L YG + C + + +N L L+E
Sbjct: 161 DILADGTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRQRNNLLSNGLSLKSLSET 220
Query: 457 ILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEGHD 512
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + + E D
Sbjct: 221 VLNFPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLEENDD 280
Query: 513 KIEWKSYIVSHMD 525
I W+ + D
Sbjct: 281 HIVWRKILEKCQD 293
>UNIPROTKB|F1Q045 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AAEX03006727 EMBL:AAEX03006728
Ensembl:ENSCAFT00000030921 Uniprot:F1Q045
Length = 850
Score = 163 (62.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 46/132 (34%), Positives = 74/132 (56%)
Query: 397 LTRILQSPGILKLGYNFQCDIKQL-------AHSY----GELECFK-HYEM-LLDIQNVF 443
++++L P I KLGY D++ L AH G L+ + H +M + D+ +
Sbjct: 427 VSQLLSDPSITKLGYGMAGDLRSLGASCPTLAHVEKQLRGGLDLLQVHRQMRIADMPALG 486
Query: 444 K-EPKG--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 500
+ E +G GLS L +++LG L+K ++ SNW++RPLS+ QL YAA DA LL+++ +
Sbjct: 487 RGEARGLRGLSLLVQQVLGRPLDKAQQLSNWDRRPLSEEQLVYAAADAYCLLEVYQTL-- 544
Query: 501 CSQPTDVSEGHD 512
C +P S D
Sbjct: 545 CREPASFSLSED 556
>RGD|1564788 [details] [associations]
symbol:Wrn "Werner syndrome, RecQ helicase-like" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=ISO] [GO:0000403 "Y-form DNA binding" evidence=ISO]
[GO:0000405 "bubble DNA binding" evidence=ISO] [GO:0000723
"telomere maintenance" evidence=ISO] [GO:0000731 "DNA synthesis
involved in DNA repair" evidence=ISO] [GO:0001302 "replicative cell
aging" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=ISO] [GO:0004527 "exonuclease activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006259 "DNA metabolic
process" evidence=ISO] [GO:0006260 "DNA replication"
evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0007569 "cell aging" evidence=ISO] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA;ISO] [GO:0009267
"cellular response to starvation" evidence=ISO] [GO:0009378
"four-way junction helicase activity" evidence=ISO] [GO:0010225
"response to UV-C" evidence=ISO] [GO:0010259 "multicellular
organismal aging" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0030145 "manganese ion binding" evidence=ISO]
[GO:0031297 "replication fork processing" evidence=ISO] [GO:0032066
"nucleolus to nucleoplasm transport" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0040009 "regulation of growth rate"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043138 "3'-5' DNA helicase activity"
evidence=ISO] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0051345 "positive regulation of
hydrolase activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA
binding" evidence=ISO] [GO:0071480 "cellular response to gamma
radiation" evidence=ISO] [GO:0032389 "MutLalpha complex"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 RGD:1564788 GO:GO:0005524 GO:GO:0005813
GO:GO:0005654 GO:GO:0006979 GO:GO:0005730 GO:GO:0042981
GO:GO:0000287 GO:GO:0006284 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0001302 GO:GO:0030145 GO:GO:0006310 GO:GO:0009267
SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 IPI:IPI00960063 ProteinModelPortal:F1LTH9
Ensembl:ENSRNOT00000058805 Uniprot:F1LTH9
Length = 1448
Score = 164 (62.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 53/174 (30%), Positives = 85/174 (48%)
Query: 340 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLT 398
H+ VVG D EW P Y +G K ++V+++Q+ S+ ++F + ++ V L
Sbjct: 73 HLSDGDVVGFDMEWPPIYKQG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLK 126
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQN-VFK-EPKGGLSGLAE 455
+L++ I K G + D +L + +LE F L D+ N K L+GL +
Sbjct: 127 MLLENKSIRKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANRKLKCAETWSLNGLVK 183
Query: 456 KILGAGL--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 507
+LG L +K+ R SNW PLS++Q YAA DA L I+ + + V
Sbjct: 184 HVLGKQLLKDKSIRCSNWSDFPLSEDQKLYAATDAYAGLIIYQKLENLGDAVQV 237
>WB|WBGene00013256 [details] [associations]
symbol:Y57A10A.13 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 EMBL:AL117195
GeneTree:ENSGT00390000006843 PIR:T31632 PIR:T31633
RefSeq:NP_496590.1 ProteinModelPortal:Q9NA69 STRING:Q9NA69
PaxDb:Q9NA69 EnsemblMetazoa:Y57A10A.13 GeneID:174858
KEGG:cel:CELE_Y57A10A.13 UCSC:Y57A10A.13 CTD:174858
WormBase:Y57A10A.13 eggNOG:NOG281262 HOGENOM:HOG000021974
InParanoid:Q9NA69 OMA:MILAYQL NextBio:885800 Uniprot:Q9NA69
Length = 710
Score = 112 (44.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 449 GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
GLS + EK+LG L+KT + S W++RPL QL YAA+DA +L ++
Sbjct: 628 GLSFICEKLLGRPLDKTEQCSVWDRRPLRCLQLRYAAMDAYCMLLLY 674
Score = 96 (38.9 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGI 406
VG+D EW YV +K +I+Q++ + ++I DL + + P L+ + ++P I
Sbjct: 460 VGVDAEWSA-YVSP---SKATILQMSLHDCIYIIDL-ESYQISPQSYHHVLSYLFETPEI 514
Query: 407 LKLGYNFQCDIKQLAHSY 424
+K+G+ F D+ QL ++
Sbjct: 515 VKIGFQFGEDLHQLRAAF 532
>UNIPROTKB|G3X7J6 [details] [associations]
symbol:G3X7J6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
OMA:QENWADH EMBL:DAAA02032393 EMBL:DAAA02032394
Ensembl:ENSBTAT00000032625 Uniprot:G3X7J6
Length = 724
Score = 159 (61.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 43/131 (32%), Positives = 70/131 (53%)
Query: 390 PDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKEPK- 447
P ++++L P I KLGY D++ L SY L + + + LD+ V ++ +
Sbjct: 438 PRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYPALAQAGQKLQGGLDLLQVHRQMRV 497
Query: 448 ------------G--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQ 493
G GLS L +++LG L+KT++ SNW++RPL + QL YAA DA LL+
Sbjct: 498 ADRPAPAVDGAAGPRGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLVYAAADAYCLLE 557
Query: 494 IFHHVRSCSQP 504
++ + C +P
Sbjct: 558 VYWAL--CREP 566
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 345 KVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV----PDVLDSCLTRI 400
+VVG+D EW+P++ G + +VS+MQ+A + VF+ DL +L+ P ++++
Sbjct: 390 QVVGVDLEWRPSFGTGGRP-RVSLMQVAVEGRVFLLDLPRLSSPAGGQGPRAFSQLVSQL 448
Query: 401 LQSPGILKLGYNFQCDIKQLAHSYGEL-ECFKHYEMLLDIQNVFKE 445
L P I KLGY D++ L SY L + + + LD+ V ++
Sbjct: 449 LSDPSITKLGYGMAGDLRSLGTSYPALAQAGQKLQGGLDLLQVHRQ 494
>UNIPROTKB|F1NAR0 [details] [associations]
symbol:F1NAR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] [GO:0000403 "Y-form DNA
binding" evidence=IEA] [GO:0000405 "bubble DNA binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000731 "DNA synthesis involved in DNA repair" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0009267 "cellular response to starvation"
evidence=IEA] [GO:0009378 "four-way junction helicase activity"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0010259 "multicellular organismal aging" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0031297
"replication fork processing" evidence=IEA] [GO:0032066 "nucleolus
to nucleoplasm transport" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
GO:GO:0032066 OMA:GIEGDQW EMBL:AADN02016143 IPI:IPI01017120
Ensembl:ENSGALT00000016720 Uniprot:F1NAR0
Length = 1367
Score = 162 (62.1 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/159 (30%), Positives = 84/159 (52%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 405
VG D EW P+Y KG KM K++++Q+ ++E ++F + ++ P L R+L+
Sbjct: 44 VGFDIEWPPSYTKG-KMAKIALIQLCVTEEKCYLFHISSMS-GFP----KGLKRLLEDET 97
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKG--GLSGLAEKILGAGL- 462
I K+G + D +L + E++ K + L D+ N + K L+GL + + G L
Sbjct: 98 IKKVGVGIEGDHWKLMGDF-EVK-LKSFVELADVANEKLKCKEVWSLNGLVKHLFGKQLL 155
Query: 463 -NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 500
+K+ R NWE+ PL + Q YAA DA I+ +++
Sbjct: 156 KDKSIRCGNWEKFPLDEEQKLYAATDAYAGFIIYQKLKT 194
>UNIPROTKB|E1BXG2 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:AADN02003163 IPI:IPI00593059
RefSeq:NP_001186629.1 UniGene:Gga.9546 ProteinModelPortal:E1BXG2
Ensembl:ENSGALT00000015388 GeneID:423264 KEGG:gga:423264
NextBio:20825760 Uniprot:E1BXG2
Length = 621
Score = 157 (60.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 56/190 (29%), Positives = 93/190 (48%)
Query: 341 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD--VLDSCLT 398
+E V+G+DCEW V+G K N VS++Q+AS + + L++L V + L
Sbjct: 101 LEKWPVLGMDCEWVS--VEG-KANPVSLLQMASASGLCV--LVRLPRLVASGQPVPKTLL 155
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSY-----GELECFKHYEMLLDIQNVFKEPKGGLSGL 453
I+ +LK+G D +L Y G ++ Y + +++ L L
Sbjct: 156 DIMADDAVLKVGVGCWEDACKLLQDYSLPVKGSVDL--RYLAMRQRKDLLHNCLS-LKSL 212
Query: 454 AEKILGAGLNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGH 511
AEK+L L+K+ R SNWE L+Q+Q+ YAA DA V + +F H+ + S+G
Sbjct: 213 AEKVLNCPLDKSPHMRCSNWEAEELTQDQVLYAARDAQVSVALFLHLLGFACLPATSKGE 272
Query: 512 DKIE-WKSYI 520
+ + W+ +
Sbjct: 273 NSVSGWEKVL 282
>UNIPROTKB|F1S4B8 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:CU468204 EMBL:CU633187
RefSeq:XP_001925126.4 Ensembl:ENSSSCT00000002567 GeneID:100155300
KEGG:ssc:100155300 Uniprot:F1S4B8
Length = 624
Score = 156 (60.0 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPD--VLDSCLTRILQS 403
V+GIDCEW N ++G K + +S++Q+AS + L++L + + L L IL
Sbjct: 107 VLGIDCEWV-N-LEG-KASPLSLLQMASPSGFCV--LVRLPKLISGGKTLPKTLLDILAD 161
Query: 404 PGILKLGYNFQCDIKQLAHSYGELE--CFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAG 461
ILK+G D +L YG + C + + +N L LAE +L
Sbjct: 162 GTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAMRHRNNLLSNGLSLKSLAETVLNFP 221
Query: 462 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEGHDKIEWK 517
L+K+ R SNW+ L+++Q+ YAA DA + + +F + S+ + E +D+I W+
Sbjct: 222 LDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLRLLGYPFSRNSTPEENNDRIGWR 281
Query: 518 SYIVSHMD 525
+ D
Sbjct: 282 KVLEKCQD 289
>TAIR|locus:2152871 [details] [associations]
symbol:AT5G24340 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002688 EMBL:AB016884
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR002782 Pfam:PF01927 EMBL:BT006449 EMBL:AK227650
IPI:IPI00549160 RefSeq:NP_197822.1 UniGene:At.30964
ProteinModelPortal:Q9FIN8 SMR:Q9FIN8 EnsemblPlants:AT5G24340.1
GeneID:832504 KEGG:ath:AT5G24340 TAIR:At5g24340
HOGENOM:HOG000242294 InParanoid:Q9FIN8 KO:K09122 OMA:NLEFWQC
PhylomeDB:Q9FIN8 ProtClustDB:CLSN2686327 Genevestigator:Q9FIN8
Uniprot:Q9FIN8
Length = 505
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 44/134 (32%), Positives = 72/134 (53%)
Query: 377 VFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELEC---FKHY 433
VF+ DL + +P V + L + SP +LKLG+ F+ D+ L+ ++ + C F+
Sbjct: 68 VFLIDLSSI--HLPSVWE-LLNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGCEGGFQEV 124
Query: 434 EMLLDIQNVF----------KEPKG--GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQL 481
+ LDI +++ K PK L+ + +++L L+K + S+W RPL++ Q
Sbjct: 125 KQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLTEEQK 184
Query: 482 EYAALDAVVLLQIF 495
YAA DA LLQIF
Sbjct: 185 LYAATDAHCLLQIF 198
>ZFIN|ZDB-GENE-030131-6387 [details] [associations]
symbol:exd2 "exonuclease 3'-5' domain containing
2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-030131-6387 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:CU302376 IPI:IPI00886631
Ensembl:ENSDART00000111389 ArrayExpress:F1QBW6 Bgee:F1QBW6
Uniprot:F1QBW6
Length = 617
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 346 VVGIDCEWKPNY---VKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQ 402
V+G+DCEW VKG +++ VS++Q++S + L++L L L +L+
Sbjct: 105 VLGLDCEWVKRVRVSVKG-RVSAVSLLQLSSFTGRCV--LVRLLAFQNAQLPKSLIVLLR 161
Query: 403 SPGILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNVFKEPKGGLS--GLAEKILG 459
+LK+G D K+LA +G L C L ++ GLS LAE +L
Sbjct: 162 DQRVLKVGVGCYEDGKRLAQDHGLTLSCTVDLRYLALRRSKQAVLTNGLSLKSLAEDLLN 221
Query: 460 AGLNKT--RRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 498
L+K+ R S+WE LS Q+ YAA DA + + +F H+
Sbjct: 222 VTLDKSVELRCSDWEAEELSPEQITYAARDAQISIALFFHL 262
>UNIPROTKB|Q9NVH0 [details] [associations]
symbol:EXD2 "Exonuclease 3'-5' domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 EMBL:CH471061
GO:GO:0003676 GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AK001600 EMBL:AK295601 EMBL:AL834434
EMBL:BX647767 EMBL:AL359317 EMBL:BC001962 IPI:IPI00465113
IPI:IPI00915852 RefSeq:NP_001180289.1 RefSeq:NP_001180290.1
RefSeq:NP_001180291.1 RefSeq:NP_001180292.1 RefSeq:NP_060669.1
UniGene:Hs.533878 ProteinModelPortal:Q9NVH0 STRING:Q9NVH0
PhosphoSite:Q9NVH0 DMDM:37999798 PaxDb:Q9NVH0 PRIDE:Q9NVH0
DNASU:55218 Ensembl:ENST00000312994 Ensembl:ENST00000409014
Ensembl:ENST00000409018 Ensembl:ENST00000409242
Ensembl:ENST00000409675 Ensembl:ENST00000409949
Ensembl:ENST00000449989 GeneID:55218 KEGG:hsa:55218 UCSC:uc001xkt.3
CTD:55218 GeneCards:GC14P069658 HGNC:HGNC:20217 HPA:HPA002906
HPA:HPA005848 neXtProt:NX_Q9NVH0 PharmGKB:PA164719421
eggNOG:NOG68878 HOGENOM:HOG000046597 InParanoid:Q9NVH0 OMA:QVIYAAR
OrthoDB:EOG4GTKD1 ChiTaRS:EXD2 GenomeRNAi:55218 NextBio:59188
ArrayExpress:Q9NVH0 Bgee:Q9NVH0 CleanEx:HS_EXDL2
Genevestigator:Q9NVH0 GermOnline:ENSG00000081177 Uniprot:Q9NVH0
Length = 621
Score = 151 (58.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 56/191 (29%), Positives = 94/191 (49%)
Query: 341 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 398
+E V+GIDCEW N ++G K + +S++Q+AS + + L++L + + L L
Sbjct: 99 LEDFPVLGIDCEWV-N-LEG-KASPLSLLQMASPSGLCV--LVRLPKLICGGKTLPRTLL 153
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYGELE--CFK-HYEMLLDIQNVFKEPKGGLSGLAE 455
IL ILK+G D +L YG + C Y + N+ L LAE
Sbjct: 154 DILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLS-LKSLAE 212
Query: 456 KILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR----SCSQPTDVSE 509
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S + P + ++
Sbjct: 213 TVLNFPLDKSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLLGYPFSRNSPGEKND 272
Query: 510 GHDKIEWKSYI 520
H W+ +
Sbjct: 273 DHSS--WRKVL 281
>UNIPROTKB|J9NWB3 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000014318 EMBL:AAEX03005807
Ensembl:ENSCAFT00000048173 Uniprot:J9NWB3
Length = 577
Score = 148 (57.2 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 55/194 (28%), Positives = 93/194 (47%)
Query: 341 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 398
+E V+GIDCEW + +G + + +S++Q+AS + L++L + + L L
Sbjct: 104 LEDFPVLGIDCEWVNS--EG-RASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLL 158
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYGELE--CFK-HYEMLLDIQNVFKEPKGGLSGLAE 455
IL ILK+G D +L YG + C Y + N+ L LAE
Sbjct: 159 DILADGTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGLS-LKSLAE 217
Query: 456 KILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEGH 511
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + + +
Sbjct: 218 TVLNFPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLDGYN 277
Query: 512 DKIEWKSYIVSHMD 525
D I W+ + D
Sbjct: 278 DHIGWRKVLEKCQD 291
>UNIPROTKB|E2QXX4 [details] [associations]
symbol:EXD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 CTD:55218 OMA:QVIYAAR
GeneTree:ENSGT00390000014318 EMBL:AAEX03005807 RefSeq:XP_547872.2
Ensembl:ENSCAFT00000026226 GeneID:490750 KEGG:cfa:490750
Uniprot:E2QXX4
Length = 623
Score = 148 (57.2 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 55/194 (28%), Positives = 93/194 (47%)
Query: 341 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 398
+E V+GIDCEW + +G + + +S++Q+AS + L++L + + L L
Sbjct: 101 LEDFPVLGIDCEWVNS--EG-RASPLSLLQMASPSGFCV--LVRLPKLICGGKTLPKTLL 155
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYGELE--CFK-HYEMLLDIQNVFKEPKGGLSGLAE 455
IL ILK+G D +L YG + C Y + N+ L LAE
Sbjct: 156 DILADGTILKVGVGCSEDASKLLQDYGLVVKGCLDLRYLAVRQRNNLLCNGLS-LKSLAE 214
Query: 456 KILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEGH 511
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + + +
Sbjct: 215 TVLNFPLDKSLLLRCSNWDAENLTEDQVIYAARDAQISVALFLHLLGYPFSRNSTLDGYN 274
Query: 512 DKIEWKSYIVSHMD 525
D I W+ + D
Sbjct: 275 DHIGWRKVLEKCQD 288
>MGI|MGI:109635 [details] [associations]
symbol:Wrn "Werner syndrome homolog (human)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0000403
"Y-form DNA binding" evidence=ISO] [GO:0000405 "bubble DNA binding"
evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO;IGI;IMP] [GO:0000731 "DNA synthesis involved in DNA
repair" evidence=ISO] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003678 "DNA helicase
activity" evidence=ISO] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=ISO]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=ISO;IMP] [GO:0006260
"DNA replication" evidence=ISO;IMP] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0006979 "response to oxidative
stress" evidence=ISO] [GO:0007569 "cell aging" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=ISO;IDA] [GO:0009267 "cellular
response to starvation" evidence=ISO] [GO:0009378 "four-way
junction helicase activity" evidence=ISO] [GO:0010225 "response to
UV-C" evidence=ISO] [GO:0010259 "multicellular organismal aging"
evidence=ISO;IGI] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030145 "manganese
ion binding" evidence=ISO] [GO:0031297 "replication fork
processing" evidence=ISO] [GO:0032066 "nucleolus to nucleoplasm
transport" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0040009 "regulation of growth rate" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0043138 "3'-5'
DNA helicase activity" evidence=ISO] [GO:0043140 "ATP-dependent
3'-5' DNA helicase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051345 "positive regulation of hydrolase
activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
evidence=ISO] [GO:0071480 "cellular response to gamma radiation"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 MGI:MGI:109635
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145 GO:GO:0006310
GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408
GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 GO:GO:0000723 eggNOG:COG0514
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 GO:GO:0032066 KO:K10900 CTD:7486
HOGENOM:HOG000146447 HOVERGEN:HBG000325 OMA:GIEGDQW
OrthoDB:EOG4DNF3J EMBL:D86527 EMBL:D86526 EMBL:AF091215
EMBL:AF091216 EMBL:AF241636 EMBL:AC153789 EMBL:AC115809
EMBL:BC050921 EMBL:BC060700 IPI:IPI00113830 PIR:T17452 PIR:T30247
RefSeq:NP_001116294.1 RefSeq:NP_035851.3 UniGene:Mm.228805 PDB:2E6L
PDB:2E6M PDBsum:2E6L PDBsum:2E6M ProteinModelPortal:O09053
SMR:O09053 DIP:DIP-27642N STRING:O09053 PhosphoSite:O09053
PaxDb:O09053 PRIDE:O09053 Ensembl:ENSMUST00000033990
Ensembl:ENSMUST00000033991 GeneID:22427 KEGG:mmu:22427
InParanoid:Q80YP9 EvolutionaryTrace:O09053 NextBio:302865
Bgee:O09053 CleanEx:MM_WRN Genevestigator:O09053
GermOnline:ENSMUSG00000031583 Uniprot:O09053
Length = 1401
Score = 152 (58.6 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 51/168 (30%), Positives = 82/168 (48%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y G K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 72 VVGFDMEWPPIYKPG-KRSRVAVIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENK 125
Query: 405 GILKLGYNFQCDIKQLAHSYG-ELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAG 461
I K G + D +L + +LE F L D+ N K L+GL + +LG
Sbjct: 126 SIKKAGVGIEGDQWKLLRDFDVKLESFVE---LTDVANEKLKCAETWSLNGLVKHVLGKQ 182
Query: 462 L--NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 507
L +K+ R SNW PL+++Q YAA DA L I+ + + V
Sbjct: 183 LLKDKSIRCSNWSNFPLTEDQKLYAATDAYAGLIIYQKLGNLGDTAQV 230
>DICTYBASE|DDB_G0278593 [details] [associations]
symbol:exdl2B "3'-5' exonuclease domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0278593 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 ProtClustDB:CLSZ2430753 RefSeq:XP_642107.2
ProteinModelPortal:Q54YU5 EnsemblProtists:DDB0238341 GeneID:8621318
KEGG:ddi:DDB_G0278593 OMA:ASKENIC Uniprot:Q54YU5
Length = 686
Score = 148 (57.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 346 VVGIDCEW-KPNYVKGCKMN----------KVSIMQIASDEMVFIFDLIKLAEDVPDVLD 394
++G D EW PN + K++ KV+++Q++S F+ + ++ E +P L+
Sbjct: 163 IIGFDAEWGNPNSIFDDKIDDKTTKTHYNHKVALIQLSSKNETFLIQVSQM-EKIPISLE 221
Query: 395 SCLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLA 454
LT P ++K+G D + ++ + K Y L+ I + GL+ LA
Sbjct: 222 QILT----DPRLIKVGVAVSQDAATIFQTFSVVT--KGYVDLVPIARLTNYEGNGLASLA 275
Query: 455 EKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
++ LNK+ R +WE + LS +Q+ YAA DA V +IF
Sbjct: 276 LNVMNVTLNKSNKIRCGHWENKKLSNDQIHYAAADAWVGREIF 318
>FB|FBgn0037901 [details] [associations]
symbol:CG6744 species:7227 "Drosophila melanogaster"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016444 "somatic cell DNA recombination"
evidence=IMP] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014297 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 eggNOG:NOG68878 OMA:QVIYAAR
GO:GO:0016444 EMBL:AY089433 RefSeq:NP_001247048.1
RefSeq:NP_650075.1 UniGene:Dm.5018 SMR:Q9VGN7 DIP:DIP-23707N
IntAct:Q9VGN7 MINT:MINT-965203 EnsemblMetazoa:FBtr0082402
EnsemblMetazoa:FBtr0308211 GeneID:41374 KEGG:dme:Dmel_CG6744
UCSC:CG6744-RA FlyBase:FBgn0037901 GeneTree:ENSGT00390000014318
InParanoid:Q9VGN7 OrthoDB:EOG4VDNDR GenomeRNAi:41374 NextBio:823540
Uniprot:Q9VGN7
Length = 583
Score = 147 (56.8 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 49/168 (29%), Positives = 83/168 (49%)
Query: 340 HIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDVLDSCLT 398
H + KV+G DCEW G V+++Q++S + +F L + + +P D L
Sbjct: 73 HCQTFKVLGFDCEW---ITVGGSRRPVALLQLSSHRGLCALFRLCHMKQ-IPQ--D--LR 124
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKIL 458
+L+ ++K+G Q D +L+H YG + ++ +P+G L L++ L
Sbjct: 125 ELLEDDSVIKVGVAPQEDAMKLSHDYG-VGVASTLDLRFLCVMAGHKPEG-LGKLSKTHL 182
Query: 459 GAGLNKTRRN--SNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQP 504
L+K R SNWE + L QL+YAA DA++ + I+ + QP
Sbjct: 183 NYTLDKHWRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKLCRDLQP 230
>RGD|1311087 [details] [associations]
symbol:Exd2 "exonuclease 3'-5' domain containing 2"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
RGD:1311087 GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:CH473982 CTD:55218 eggNOG:NOG68878
HOGENOM:HOG000046597 OMA:QVIYAAR OrthoDB:EOG4GTKD1
GeneTree:ENSGT00390000014318 EMBL:BC166432 IPI:IPI00365636
RefSeq:NP_001102185.1 UniGene:Rn.102 STRING:B2GUW4
Ensembl:ENSRNOT00000033378 GeneID:362759 KEGG:rno:362759
UCSC:RGD:1311087 HOVERGEN:HBG051023 NextBio:681137
Genevestigator:B2GUW4 Uniprot:B2GUW4
Length = 648
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/188 (29%), Positives = 90/188 (47%)
Query: 341 IEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLT 398
+E V+GIDCEW N ++G K + +S++Q+AS L++L + L L
Sbjct: 126 LEDFPVLGIDCEWV-N-LEG-KASPLSLLQMASPSGFCA--LVRLPRLIYGGKTLPRTLL 180
Query: 399 RILQSPGILKLGYNFQCDIKQLAHSYGELE--CFKHYEMLLDIQNVFKEPKGGLSGLAEK 456
IL ILK+G D +L YG + C + + N L LAE
Sbjct: 181 DILADGTILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNSVLCNGLSLKSLAET 240
Query: 457 ILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPTDVSEGHD 512
+L L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ + E +
Sbjct: 241 LLNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRNSYEEENNG 300
Query: 513 KIEWKSYI 520
+I W+ +
Sbjct: 301 QINWQKVL 308
>UNIPROTKB|Q14191 [details] [associations]
symbol:WRN "Werner syndrome ATP-dependent helicase"
species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0040009
"regulation of growth rate" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031297 "replication fork processing" evidence=IMP;IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
[GO:0010259 "multicellular organismal aging" evidence=IMP]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0007568 "aging" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA;IMP]
[GO:0004386 "helicase activity" evidence=IDA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0000731 "DNA synthesis involved
in DNA repair" evidence=IDA] [GO:0010225 "response to UV-C"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0000403 "Y-form
DNA binding" evidence=IDA] [GO:0043138 "3'-5' DNA helicase
activity" evidence=IDA] [GO:0000405 "bubble DNA binding"
evidence=IDA] [GO:0009378 "four-way junction helicase activity"
evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IDA] [GO:0051345
"positive regulation of hydrolase activity" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000287 "magnesium ion
binding" evidence=IDA] [GO:0030145 "manganese ion binding"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0071480 "cellular response to gamma
radiation" evidence=IDA] [GO:0004527 "exonuclease activity"
evidence=IDA] [GO:0009267 "cellular response to starvation"
evidence=IDA] [GO:0032066 "nucleolus to nucleoplasm transport"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP;IDA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
SMART:SM00474 SMART:SM00490 SMART:SM00956 GO:GO:0005524
GO:GO:0005813 Pathway_Interaction_DB:telomerasepathway
GO:GO:0042803 GO:GO:0005654 GO:GO:0006979 GO:GO:0005730
GO:GO:0042981 GO:GO:0032403 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 GO:GO:0004003 SUPFAM:SSF53098
MIM:114500 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345 GO:GO:0010259
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GO:GO:0000723 GO:GO:0010225 GO:GO:0007569 eggNOG:COG0514
Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403
GO:GO:0000731 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
GO:GO:0031297 GO:GO:0043138 GO:GO:0032066 KO:K10900 EMBL:L76937
EMBL:AY818673 EMBL:AF091214 EMBL:AF181897 EMBL:AF181896
EMBL:AY442327 EMBL:AC084736 IPI:IPI00029107 RefSeq:NP_000544.2
UniGene:Hs.632050 PDB:2AXL PDB:2DGZ PDB:2E1E PDB:2E1F PDB:2FBT
PDB:2FBV PDB:2FBX PDB:2FBY PDB:2FC0 PDB:3AAF PDBsum:2AXL
PDBsum:2DGZ PDBsum:2E1E PDBsum:2E1F PDBsum:2FBT PDBsum:2FBV
PDBsum:2FBX PDBsum:2FBY PDBsum:2FC0 PDBsum:3AAF DisProt:DP00443
ProteinModelPortal:Q14191 SMR:Q14191 DIP:DIP-31380N IntAct:Q14191
MINT:MINT-95856 STRING:Q14191 PhosphoSite:Q14191 DMDM:6136393
PaxDb:Q14191 PRIDE:Q14191 Ensembl:ENST00000298139 GeneID:7486
KEGG:hsa:7486 UCSC:uc003xio.4 CTD:7486 GeneCards:GC08P030948
H-InvDB:HIX0007441 HGNC:HGNC:12791 HPA:HPA028661 MIM:277700
MIM:604611 neXtProt:NX_Q14191 Orphanet:902 PharmGKB:PA367
HOGENOM:HOG000146447 HOVERGEN:HBG000325 InParanoid:Q14191
OMA:GIEGDQW OrthoDB:EOG4DNF3J PhylomeDB:Q14191
EvolutionaryTrace:Q14191 GenomeRNAi:7486 NextBio:29326 Bgee:Q14191
CleanEx:HS_WRN Genevestigator:Q14191 GermOnline:ENSG00000165392
Uniprot:Q14191
Length = 1432
Score = 149 (57.5 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/158 (29%), Positives = 83/158 (52%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y +G K+ KV+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPLYNRG-KLGKVALIQLCVSESKCYLFHVSSMS-----VFPQGLKMLLENK 131
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAGL 462
+ K G + D +L + +++ K++ L D+ N K L+ L + +LG L
Sbjct: 132 AVKKAGVGIEGDQWKLLRDF-DIK-LKNFVELTDVANKKLKCTETWSLNSLVKHLLGKQL 189
Query: 463 --NKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 498
+K+ R SNW + PL+++Q YAA DA I+ ++
Sbjct: 190 LKDKSIRCSNWSKFPLTEDQKLYAATDAYAGFIIYRNL 227
>UNIPROTKB|F1PZR2 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000010396
Uniprot:F1PZR2
Length = 1336
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y K K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 83 VVGFDMEWPPVYTKR-KPSRVALIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENE 136
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAGL 462
I K G + D ++L + +++ K++ L D+ N K L+GL + + G L
Sbjct: 137 AIKKAGVGIKGDQRKLLCDF-DID-LKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQL 194
Query: 463 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
K R R SNW PL+++Q YAA DA L I+
Sbjct: 195 LKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIY 229
>ZFIN|ZDB-GENE-070702-2 [details] [associations]
symbol:wrn "Werner syndrome" species:7955 "Danio
rerio" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00474 SMART:SM00490
SMART:SM00956 ZFIN:ZDB-GENE-070702-2 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:BX537303 IPI:IPI00993584
ProteinModelPortal:E9QGF6 Ensembl:ENSDART00000136531 Uniprot:E9QGF6
Length = 1436
Score = 148 (57.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQI-ASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPG 405
VG D EW P++ KG K KV+++Q+ AS++ ++F + ++ P L L+
Sbjct: 67 VGFDLEWPPSFTKG-KTKKVAMVQLCASEDKCYLFHISSMSGFPPG-----LKMFLEDEN 120
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE--PKGGLSGLAEKILGAGLN 463
I+K+G + D +L Y +++ K+ L D+ N K L GL + +L L
Sbjct: 121 IMKVGVGIEGDKWKLLSDY-DIK-LKNIVDLSDLANEKLRCCEKWSLDGLVKHLLKKQLF 178
Query: 464 KTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVR 499
K + R S+W+ L+++Q YAA DA L I+ ++
Sbjct: 179 KDKLVRCSHWDDFSLTEDQKRYAATDAYAGLLIYQKLQ 216
>UNIPROTKB|F1PZR3 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000010395
Uniprot:F1PZR3
Length = 1499
Score = 148 (57.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y K K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYTKR-KPSRVALIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAGL 462
I K G + D ++L + +++ K++ L D+ N K L+GL + + G L
Sbjct: 132 AIKKAGVGIKGDQRKLLCDF-DID-LKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQL 189
Query: 463 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
K R R SNW PL+++Q YAA DA L I+
Sbjct: 190 LKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIY 224
>UNIPROTKB|F1PUF8 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000037050
OMA:TERICLM Uniprot:F1PUF8
Length = 1574
Score = 148 (57.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 48/155 (30%), Positives = 80/155 (51%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y K K ++V+++Q+ S+ ++F + ++ V L +L++
Sbjct: 197 VVGFDMEWPPVYTKR-KPSRVALIQLCVSENKCYLFHISSMS-----VFPQGLKMLLENE 250
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAGL 462
I K G + D ++L + +++ K++ L D+ N K L+GL + + G L
Sbjct: 251 AIKKAGVGIKGDQRKLLCDF-DID-LKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQL 308
Query: 463 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
K R R SNW PL+++Q YAA DA L I+
Sbjct: 309 LKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIY 343
>GENEDB_PFALCIPARUM|PF14_0112 [details] [associations]
symbol:PF14_0112 "POM1, putative" species:5833
"Plasmodium falciparum" [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0020011 "apicoplast" evidence=ISS] InterPro:IPR001098
InterPro:IPR002298 InterPro:IPR002562 InterPro:IPR007694
InterPro:IPR012337 Pfam:PF00476 Pfam:PF01612 PRINTS:PR00868
PROSITE:PS51199 SMART:SM00474 SMART:SM00482 InterPro:IPR006171
GO:GO:0005739 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
EMBL:AE014187 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003678
GO:GO:0003887 GO:GO:0032508 KO:K02335 GO:GO:0020011
GenomeReviews:AE014187_GR SMART:SM00493 HSSP:P00582
RefSeq:XP_001348285.1 ProteinModelPortal:Q8ILY1
EnsemblProtists:PF14_0112:mRNA GeneID:811693 KEGG:pfa:PF14_0112
EuPathDB:PlasmoDB:PF3D7_1411400 HOGENOM:HOG000281341
ProtClustDB:CLSZ2446708 Uniprot:Q8ILY1
Length = 2016
Score = 147 (56.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 46/139 (33%), Positives = 78/139 (56%)
Query: 366 VSIMQIASDEM-VFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 424
+ ++QIA + V I+D+ + + D+LD L ++L++ I+K+ N + D K L H+
Sbjct: 1483 IRLIQIAVENYPVIIYDMFNINKK--DILDG-LRKVLENKNIIKIIQNGKFDAKFLLHNN 1539
Query: 425 GELE-CFKHY--EMLLDIQNVFKEPKG-GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 480
++E F Y LLD +N K G L+ + EK L L+K ++NS W L+ NQ
Sbjct: 1540 FKIENIFDTYIASKLLD-KN--KNMYGFKLNNIVEKYLNVILDKQQQNSVWNNSLLNNNQ 1596
Query: 481 LEYAALDAVVLLQIFHHVR 499
L YAA D+ LL+++ ++
Sbjct: 1597 LFYAARDSSCLLKLYKKLK 1615
Score = 52 (23.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 31/142 (21%), Positives = 65/142 (45%)
Query: 97 LPIFGVYSEGFSHLIISALRRHQKTTVNSADSTQAKEIAAYLFLDITGGFVDHDEKLMVK 156
+ +F +Y++ F L + L+ H T ++ A + A Y + D+ +D+ + M+
Sbjct: 769 IELFDIYADKFELLPLKFLKFHGSTNIDQV--IDAMDYAVYAY-DVKHIIIDNLQ-FMLN 824
Query: 157 ILEAFDV-RLTDIEKAITQLKAQNEHRFDTAKTV-IEQYIFAMIDSQSYMTAVSLLEHFS 214
I + D+ L +I AI + ++ F T K V I + + + ++ S+ S
Sbjct: 825 INKFSDIYELQNI--AIDKFRS-----FSTNKNVHITLVVHPRKEDNNLLSISSVFG--S 875
Query: 215 IRQSGESFLLKMIQNKEFKAAE 236
++ + E+ + +IQ K E
Sbjct: 876 VKSTQEADNVFIIQRHVSKTNE 897
>UNIPROTKB|Q8ILY1 [details] [associations]
symbol:POM1 "Pfprex" species:36329 "Plasmodium falciparum
3D7" [GO:0005739 "mitochondrion" evidence=ISS] [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001098 InterPro:IPR002298
InterPro:IPR002562 InterPro:IPR007694 InterPro:IPR012337
Pfam:PF00476 Pfam:PF01612 PRINTS:PR00868 PROSITE:PS51199
SMART:SM00474 SMART:SM00482 InterPro:IPR006171 GO:GO:0005739
GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 EMBL:AE014187
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0003678 GO:GO:0003887
GO:GO:0032508 KO:K02335 GO:GO:0020011 GenomeReviews:AE014187_GR
SMART:SM00493 HSSP:P00582 RefSeq:XP_001348285.1
ProteinModelPortal:Q8ILY1 EnsemblProtists:PF14_0112:mRNA
GeneID:811693 KEGG:pfa:PF14_0112 EuPathDB:PlasmoDB:PF3D7_1411400
HOGENOM:HOG000281341 ProtClustDB:CLSZ2446708 Uniprot:Q8ILY1
Length = 2016
Score = 147 (56.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 46/139 (33%), Positives = 78/139 (56%)
Query: 366 VSIMQIASDEM-VFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 424
+ ++QIA + V I+D+ + + D+LD L ++L++ I+K+ N + D K L H+
Sbjct: 1483 IRLIQIAVENYPVIIYDMFNINKK--DILDG-LRKVLENKNIIKIIQNGKFDAKFLLHNN 1539
Query: 425 GELE-CFKHY--EMLLDIQNVFKEPKG-GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQ 480
++E F Y LLD +N K G L+ + EK L L+K ++NS W L+ NQ
Sbjct: 1540 FKIENIFDTYIASKLLD-KN--KNMYGFKLNNIVEKYLNVILDKQQQNSVWNNSLLNNNQ 1596
Query: 481 LEYAALDAVVLLQIFHHVR 499
L YAA D+ LL+++ ++
Sbjct: 1597 LFYAARDSSCLLKLYKKLK 1615
Score = 52 (23.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 31/142 (21%), Positives = 65/142 (45%)
Query: 97 LPIFGVYSEGFSHLIISALRRHQKTTVNSADSTQAKEIAAYLFLDITGGFVDHDEKLMVK 156
+ +F +Y++ F L + L+ H T ++ A + A Y + D+ +D+ + M+
Sbjct: 769 IELFDIYADKFELLPLKFLKFHGSTNIDQV--IDAMDYAVYAY-DVKHIIIDNLQ-FMLN 824
Query: 157 ILEAFDV-RLTDIEKAITQLKAQNEHRFDTAKTV-IEQYIFAMIDSQSYMTAVSLLEHFS 214
I + D+ L +I AI + ++ F T K V I + + + ++ S+ S
Sbjct: 825 INKFSDIYELQNI--AIDKFRS-----FSTNKNVHITLVVHPRKEDNNLLSISSVFG--S 875
Query: 215 IRQSGESFLLKMIQNKEFKAAE 236
++ + E+ + +IQ K E
Sbjct: 876 VKSTQEADNVFIIQRHVSKTNE 897
>UNIPROTKB|F1RX70 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0006260
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000017248 Uniprot:F1RX70
Length = 1409
Score = 144 (55.7 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 44/148 (29%), Positives = 76/148 (51%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y KG K+ +++++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYNKG-KLGRIALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAGL 462
I K G + D +L + +++ K + L D+ N K L+GL + + L
Sbjct: 132 AIKKAGVGIKGDQSKLLRDF-DIK-LKSFVELTDVANEKLKCAETWSLNGLVKHLFSKQL 189
Query: 463 --NKTRRNSNWEQRPLSQNQLEYAALDA 488
+K+ R SNW PL+++Q YAA DA
Sbjct: 190 LKDKSIRCSNWSNFPLTEDQKLYAATDA 217
>UNIPROTKB|I3LC91 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
processing" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:FP102088 EMBL:FP565873
Ensembl:ENSSSCT00000022344 Uniprot:I3LC91
Length = 1507
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 44/148 (29%), Positives = 76/148 (51%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P Y KG K+ +++++Q+ S+ ++F + ++ V L +L++
Sbjct: 78 VVGFDMEWPPVYNKG-KLGRIALIQLCVSESKCYLFHISSMS-----VFPQGLKMLLENE 131
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV-FK-EPKGGLSGLAEKILGAGL 462
I K G + D +L + +++ K + L D+ N K L+GL + + L
Sbjct: 132 AIKKAGVGIKGDQSKLLRDF-DIK-LKSFVELTDVANEKLKCAETWSLNGLVKHLFSKQL 189
Query: 463 --NKTRRNSNWEQRPLSQNQLEYAALDA 488
+K+ R SNW PL+++Q YAA DA
Sbjct: 190 LKDKSIRCSNWSNFPLTEDQKLYAATDA 217
>UNIPROTKB|B3LWP6 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7217 "Drosophila ananassae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH902617
GO:GO:0045950 eggNOG:NOG266861 RefSeq:XP_001954123.1
ProteinModelPortal:B3LWP6 STRING:B3LWP6 PRIDE:B3LWP6 GeneID:6500896
KEGG:dan:Dana_GF18118 FlyBase:FBgn0095136 InParanoid:B3LWP6
OrthoDB:EOG473N7C Uniprot:B3LWP6
Length = 355
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 44/152 (28%), Positives = 70/152 (46%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +I+ L L + L S L ++ P
Sbjct: 161 MAFDMEWPFSFQTG--PGKSSVIQICVDEKCCYIYQLTNLKK-----LPSALVALINHPK 213
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++L + E+ E +D+ NV + G L LA I
Sbjct: 214 VRLHGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNVICQTGGRWSLERLANFICRK 273
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 274 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 305
>UNIPROTKB|B4K934 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7230 "Drosophila mojavensis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH933806
GO:GO:0045950 OrthoDB:EOG473N7C RefSeq:XP_001998986.1
ProteinModelPortal:B4K934 PRIDE:B4K934 EnsemblMetazoa:FBtr0174989
GeneID:6572881 KEGG:dmo:Dmoj_GI24264 FlyBase:FBgn0146987
InParanoid:B4K934 Uniprot:B4K934
Length = 329
Score = 134 (52.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +++ L L + +P + L ++ P
Sbjct: 135 MAFDMEWPFSFQTG--PGKSSVIQICVDERCCYVYQLSNLKK-IP----AALVALINHPK 187
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++LA + E+ E +D+ N E G L LA I
Sbjct: 188 VRLHGVNIKADFRKLARDFPEVAAEPLIEKCVDLGVWCNEVCETGGRWSLERLANFIAKK 247
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQ 503
++K++ R S W PL +NQL YAA+D + I+ + Q
Sbjct: 248 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYREIEQREQ 292
>UNIPROTKB|B4JF25 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7222 "Drosophila grimshawi" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CH916369
GO:GO:0045950 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_001990244.1 ProteinModelPortal:B4JF25 STRING:B4JF25
EnsemblMetazoa:FBtr0154645 GeneID:6563370 KEGG:dgr:Dgri_GH19231
FlyBase:FBgn0126697 InParanoid:B4JF25 OMA:FIAKKAM Uniprot:B4JF25
Length = 331
Score = 133 (51.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +++ L KL + +P + L ++ P
Sbjct: 137 MAFDMEWPFSFQTG--PGKSSVIQICVDERCCYVYQLSKLNK-IP----AALAALINHPK 189
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++L + E+ E +D+ N E G L LA I
Sbjct: 190 VRLHGVNIKADFRKLERDFPEMSAEPLIEKCVDLGVWCNQVCETGGRWSLERLANFIAKK 249
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 498
++K++ R S W PL +NQL YAA+D + I+ +
Sbjct: 250 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYREI 289
>UNIPROTKB|Q8N9H8 [details] [associations]
symbol:EXD3 "Probable exonuclease mut-7 homolog"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:BX322799 UniGene:Hs.495553 GeneCards:GC09M140201
HGNC:HGNC:26023 ChiTaRS:EXD3 eggNOG:NOG241966 InterPro:IPR002782
Pfam:PF01927 EMBL:AB061798 EMBL:AK055004 EMBL:AK094438
EMBL:BC037355 EMBL:BC110879 IPI:IPI00413242 IPI:IPI00884892
IPI:IPI00884936 IPI:IPI00885207 RefSeq:NP_060290.3 HSSP:Q14191
ProteinModelPortal:Q8N9H8 SMR:Q8N9H8 STRING:Q8N9H8 DMDM:308153580
PeptideAtlas:Q2TAK4 PRIDE:Q8N9H8 Ensembl:ENST00000340951
Ensembl:ENST00000342129 Ensembl:ENST00000479452 GeneID:54932
KEGG:hsa:54932 UCSC:uc004cmp.2 UCSC:uc004cmr.3 UCSC:uc010ncf.1
CTD:54932 HPA:HPA047395 neXtProt:NX_Q8N9H8 PharmGKB:PA164719422
HOVERGEN:HBG108161 InParanoid:Q8N9H8 OMA:QENWADH OrthoDB:EOG4MPHPR
GenomeRNAi:54932 NextBio:58039 ArrayExpress:Q8N9H8 Bgee:Q8N9H8
Genevestigator:Q8N9H8 Uniprot:Q8N9H8
Length = 876
Score = 139 (54.0 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 41/124 (33%), Positives = 65/124 (52%)
Query: 397 LTRILQSPGILKLGYNFQCDIKQLAHS-----YGELECFKHYEMLLDIQN--VFKEPKG- 448
+ ++L P I KLGY D+++L S + E + ++LL + V P
Sbjct: 449 VAQLLSDPSITKLGYGMVGDLQKLGTSCPALAHVEKQILGGMDLLLVHRQMRVASVPAPA 508
Query: 449 --------GLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRS 500
GLS L +++LG L+KT++ SNW++RPL + Q+ YAA DA LL++ H
Sbjct: 509 VDRARELRGLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQVIYAAADAYCLLEV--HQAL 566
Query: 501 CSQP 504
C +P
Sbjct: 567 CREP 570
>TIGR_CMR|SPO_0083 [details] [associations]
symbol:SPO_0083 "exonuclease, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0008408 "3'-5'
exonuclease activity" evidence=ISS] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 KO:K03684 HOGENOM:HOG000003834
OMA:CTKIASR ProtClustDB:CLSK863722 RefSeq:YP_165357.1
ProteinModelPortal:Q5LWM8 GeneID:3193828 KEGG:sil:SPO0083
PATRIC:23373403 Uniprot:Q5LWM8
Length = 204
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/148 (27%), Positives = 75/148 (50%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIAS-DEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VV IDCE +++ ++Q++ D I + K P++ C +L++P
Sbjct: 19 VVAIDCE---TMGLNPHRDRLCVIQMSGGDGNTHIVQVEKGQTAAPNL---CA--MLENP 70
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLD-IQNVFKEPKGGLSGLAEKILGAGLN 463
+LKL + + DI L H++G L + + + + + + GL L +++LG ++
Sbjct: 71 EVLKLFHFGRFDIAALYHAFGALTAPVYCTKIASRLVRTYTD-RHGLKNLCQELLGVDIS 129
Query: 464 KTRRNSNWEQRPLSQNQLEYAALDAVVL 491
K ++ S+W LS+ QL+YAA D + L
Sbjct: 130 KQQQMSDWGAETLSEAQLDYAASDVLYL 157
>UNIPROTKB|O93530 [details] [associations]
symbol:wrn "Werner syndrome ATP-dependent helicase homolog"
species:8355 "Xenopus laevis" [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0030145
"manganese ion binding" evidence=ISS] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
SMART:SM00956 GO:GO:0005524 GO:GO:0005634 GO:GO:0000287
GO:GO:0003677 GO:GO:0006260 GO:GO:0006259 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030145 GO:GO:0006310
SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819
TIGRFAMs:TIGR00614 KO:K10900 CTD:7486 HOVERGEN:HBG000325
EMBL:AF067418 PIR:T14895 RefSeq:NP_001081838.1 UniGene:Xl.404
ProteinModelPortal:O93530 SMR:O93530 GeneID:398079 KEGG:xla:398079
Xenbase:XB-GENE-992879 Uniprot:O93530
Length = 1436
Score = 138 (53.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 50/156 (32%), Positives = 80/156 (51%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
V+G D EW P Y KG K KV+++Q+ S++ ++F + +A P L R+L+
Sbjct: 72 VLGFDIEWPPVYTKG-KTGKVALIQVCVSEKKCYLFHISPMA-GFP----KGLKRLLEDE 125
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNV---FKEPKGGLSGLAEKILGAG 461
+ K+G + D +L Y EL+ K + L ++ N KE K +GL + +
Sbjct: 126 SVRKVGVGIEGDQWKLMSDY-ELK-LKGFIELSEMANQKLRCKE-KWTFNGLIKHLFKEQ 182
Query: 462 LNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
L K + R SNW+ L+++Q YAA DA L I+
Sbjct: 183 LYKRKSYRCSNWDIFLLTEDQKLYAATDAYAGLLIY 218
>UNIPROTKB|B4N9D3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7260 "Drosophila willistoni" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH964232 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_002069580.1 ProteinModelPortal:B4N9D3 STRING:B4N9D3
GeneID:6648207 KEGG:dwi:Dwil_GK11496 FlyBase:FBgn0213507
InParanoid:B4N9D3 Uniprot:B4N9D3
Length = 356
Score = 133 (51.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 43/152 (28%), Positives = 70/152 (46%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++Q+ DE +++ L KL + L + L +L P
Sbjct: 162 MAFDMEWPFSFQTG--PGKSSVIQVCVDERCCYVYQLSKLKK-----LPAALVALLNHPK 214
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++L + E+ E +D+ N E G L LA I
Sbjct: 215 VRLHGVNIKADFRKLQRDFPEVSADPLIEKCVDLGVWCNEICETGGRWSLERLANFIAKK 274
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 275 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 306
Score = 38 (18.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 220 ESFLLKMIQNKEFKAAEKWATFMGKPILLKRLAEK 254
+ +L+KM +K A G P + + EK
Sbjct: 2 DKYLIKMPTKTNLNGDQKPAALKGTPKTIDKQKEK 36
>FB|FBgn0032924 [details] [associations]
symbol:Nbr "Nibbler" species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0044748
"3'-5'-exoribonuclease activity involved in mature miRNA 3'-end
processing" evidence=IMP] [GO:0044747 "mature miRNA 3'-end
processing" evidence=IMP] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014134 GO:GO:0003676 GO:GO:0030529
SUPFAM:SSF53098 GO:GO:0000175 GO:GO:0035196 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 EMBL:AY118462 RefSeq:NP_610094.1
UniGene:Dm.30864 ProteinModelPortal:Q9VIF1 SMR:Q9VIF1 IntAct:Q9VIF1
MINT:MINT-282622 PaxDb:Q9VIF1 PRIDE:Q9VIF1
EnsemblMetazoa:FBtr0081499 GeneID:35385 KEGG:dme:Dmel_CG9247
UCSC:CG9247-RA FlyBase:FBgn0032924 InParanoid:Q9VIF1 OMA:AIDARCL
OrthoDB:EOG4X69QB PhylomeDB:Q9VIF1 GenomeRNAi:35385 NextBio:793268
Bgee:Q9VIF1 GO:GO:0043628 Uniprot:Q9VIF1
Length = 625
Score = 100 (40.3 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 450 LSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFH 496
L+ L+ LG LNK+ + SNW RPL + Q+ YAA+DA L+ I++
Sbjct: 549 LTDLSLACLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLMLIYN 595
Score = 79 (32.9 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 29/116 (25%), Positives = 55/116 (47%)
Query: 336 KAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 395
+ + H++ V+ +D EW + C N++ ++QIA+ V++ D + E +
Sbjct: 421 RMLYHLQQECVIYLDSEWMQSV---CGDNQLCVLQIATGHNVYLIDCLA-RESLRSEHWR 476
Query: 396 CL-TRILQSPGILKLGYNFQCDIKQLAHSYG---ELECFKHYEMLLDIQNVFKEPK 447
L I + I K+G++ D+ L S L+ HY LD++N++ E K
Sbjct: 477 LLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMPHHY---LDLRNLWLELK 529
Score = 41 (19.5 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 32/141 (22%), Positives = 56/141 (39%)
Query: 153 LMVKILEAFDVRLTDIEKAITQ--LKAQNEHRFDTAKTV-----IEQYIFA--MID--SQ 201
L+ K+ E D + K +TQ + Q H FD + IE+ A +D +Q
Sbjct: 173 LLPKLRELLD---NGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYLDHATQ 229
Query: 202 SYMTAVSLLEHFSIRQSGESFLLKMIQN--KEFKAAEKWATFMGKPILLKRLAEKACWDI 259
+ V L+ ++ L + + + K K + ++ ++ RLA+K +D
Sbjct: 230 QRLPFVKFLDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVARLAKKYGFDD 289
Query: 260 AEAKTKGDKRLLEYLVYLAME 280
A + YL YL E
Sbjct: 290 AVTPNYKFTKTCSYLHYLYRE 310
>UNIPROTKB|B4G5C9 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7234 "Drosophila persimilis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH479179 OrthoDB:EOG473N7C RefSeq:XP_002013809.1
ProteinModelPortal:B4G5C9 PRIDE:B4G5C9 GeneID:6588337
KEGG:dpe:Dper_GL23198 FlyBase:FBgn0160788 Uniprot:B4G5C9
Length = 355
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +++ L L + L + L ++ P
Sbjct: 161 MAFDMEWPFSFQTG--PGKSSVIQICVDEKCCYVYQLTNLKK-----LPAALVALINHPK 213
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++L + E+ E +D+ N E G L LA I
Sbjct: 214 VRLHGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNEICETGGRWSLERLANFIAKK 273
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 274 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 305
>UNIPROTKB|Q299L3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0005634
"nucleus" evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 EMBL:CM000070 SUPFAM:SSF53098 GO:GO:0008408
GenomeReviews:CM000070_GR GO:GO:0045950 eggNOG:NOG266861
OrthoDB:EOG473N7C RefSeq:XP_001358549.2 ProteinModelPortal:Q299L3
GeneID:4801455 KEGG:dpo:Dpse_GA20513 FlyBase:FBgn0080507
InParanoid:Q299L3 Uniprot:Q299L3
Length = 356
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +++ L L + L + L ++ P
Sbjct: 162 MAFDMEWPFSFQTG--PGKSSVIQICVDEKCCYVYQLTNLKK-----LPAALVALINHPK 214
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++L + E+ E +D+ N E G L LA I
Sbjct: 215 VRLHGVNIKADFRKLQRDFPEVSADALIEKCVDLGVWCNEICETGGRWSLERLANFIAKK 274
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 275 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 306
>DICTYBASE|DDB_G0278079 [details] [associations]
symbol:exdl2A "3'-5' exonuclease domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004527
"exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0278079 GenomeReviews:CM000152_GR EMBL:AAFI02000023
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 RefSeq:XP_642108.1 ProteinModelPortal:Q54YU4
EnsemblProtists:DDB0238340 GeneID:8621319 KEGG:ddi:DDB_G0278079
OMA:RCSHWEN ProtClustDB:CLSZ2430753 Uniprot:Q54YU4
Length = 718
Score = 130 (50.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 44/162 (27%), Positives = 78/162 (48%)
Query: 346 VVGIDCEWKP-NYVKGC--------KMN-KVSIMQIASDEMVFIFDLIKLAEDVPDVLDS 395
++G D EW N + K N KV+++Q++S F+ + ++ E +P L+
Sbjct: 194 IIGFDAEWSNFNSIDDSTTTTTTTSKYNHKVALIQLSSKNETFLIQVSQM-EKIPTSLEQ 252
Query: 396 CLTRILQSPGILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAE 455
LT P ++K+G D + ++ + K L+ I + GL+ LA
Sbjct: 253 ILT----DPRLIKVGVAVSQDAATIFQTFSVVT--KGCVDLVPIARLTNYEGNGLASLAL 306
Query: 456 KILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIF 495
++ L+K+ R S+WE + L+ +Q+ YAA DA V +IF
Sbjct: 307 NVMNVTLDKSNLIRCSHWENKDLTNDQIHYAAADAWVGREIF 348
>GENEDB_PFALCIPARUM|PFA0290w [details] [associations]
symbol:PFA0290w "DNA binding protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0003677 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL844501 RefSeq:XP_001350990.2
ProteinModelPortal:Q8I282 EnsemblProtists:PFA0290w:mRNA
GeneID:813195 KEGG:pfa:PFA_0290w HOGENOM:HOG000283827
ProtClustDB:CLSZ2432236 Uniprot:Q8I282
Length = 448
Score = 127 (49.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 345 KVVGIDCEWKPNYVKG-C--KMNKV-SIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 400
+++ I + K NY C + NK+ ++Q+ S ++ F+F++ KL +P + I
Sbjct: 115 QLINIFKKKKKNYAYNLCNNEKNKILCLIQLCSSDLCFVFNIHKLNGHIP----ISVKNI 170
Query: 401 LQSPGILKLGYNFQCDIKQ-LAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 459
L++ I+K+ ++ + + L+++ F Y +D N P L L + L
Sbjct: 171 LENEEIIKVAHDIKNEKDMFLSNNIQIKNVFDLYNYAID--NFIYPPS--LQSLVKIYLN 226
Query: 460 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 498
L+K R SNW L Q Q+ YAA+DA QI+ H+
Sbjct: 227 KFLDKKFRLSNWLNYSLLQEQILYAAVDAYASRQIYFHL 265
>UNIPROTKB|Q8I282 [details] [associations]
symbol:PFA_0290w "DNA binding protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0003677 GO:GO:0005622 SUPFAM:SSF53098
GO:GO:0008408 EMBL:AL844501 RefSeq:XP_001350990.2
ProteinModelPortal:Q8I282 EnsemblProtists:PFA0290w:mRNA
GeneID:813195 KEGG:pfa:PFA_0290w HOGENOM:HOG000283827
ProtClustDB:CLSZ2432236 Uniprot:Q8I282
Length = 448
Score = 127 (49.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 345 KVVGIDCEWKPNYVKG-C--KMNKV-SIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRI 400
+++ I + K NY C + NK+ ++Q+ S ++ F+F++ KL +P + I
Sbjct: 115 QLINIFKKKKKNYAYNLCNNEKNKILCLIQLCSSDLCFVFNIHKLNGHIP----ISVKNI 170
Query: 401 LQSPGILKLGYNFQCDIKQ-LAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILG 459
L++ I+K+ ++ + + L+++ F Y +D N P L L + L
Sbjct: 171 LENEEIIKVAHDIKNEKDMFLSNNIQIKNVFDLYNYAID--NFIYPPS--LQSLVKIYLN 226
Query: 460 AGLNKTRRNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 498
L+K R SNW L Q Q+ YAA+DA QI+ H+
Sbjct: 227 KFLDKKFRLSNWLNYSLLQEQILYAAVDAYASRQIYFHL 265
>TIGR_CMR|SO_2580 [details] [associations]
symbol:SO_2580 "ribonuclease D" species:211586 "Shewanella
oneidensis MR-1" [GO:0004525 "ribonuclease III activity"
evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
HAMAP:MF_01899 InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR006292 InterPro:IPR010997 InterPro:IPR012337
Pfam:PF00570 Pfam:PF01612 PROSITE:PS50967 SMART:SM00341
SMART:SM00474 GO:GO:0005737 GO:GO:0000166 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0090305
SUPFAM:SSF53098 GO:GO:0008408 SUPFAM:SSF47819 GO:GO:0042780
HOGENOM:HOG000277560 KO:K03684 OMA:TKYLHAG GO:GO:0033890
TIGRFAMs:TIGR01388 RefSeq:NP_718166.1 ProteinModelPortal:Q8EE10
GeneID:1170282 KEGG:son:SO_2580 PATRIC:23524787
ProtClustDB:CLSK906783 Uniprot:Q8EE10
Length = 367
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 365 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 424
K+ ++Q + + + D I L PD+ S +L +P I+KL ++ D++ AH Y
Sbjct: 39 KLGLIQAYDGKTLALIDPIAL----PDL--SAFWALLDNPNIIKLVHSCSEDLEVFAH-Y 91
Query: 425 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 484
G+ + ++ + G + L E LG ++K ++W +RPL+ QL YA
Sbjct: 92 GQRQPTPLFDSQIAASLCGMGHGLGYAKLVETCLGEVIDKGESRTDWMRRPLTDAQLSYA 151
Query: 485 ALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEW 516
A D + L Q++ Q + + D+++W
Sbjct: 152 ANDVLYLYQLY------PQLAEKLQTQDRLDW 177
>UNIPROTKB|E1BEE6 [details] [associations]
symbol:WRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
[GO:0051345 "positive regulation of hydrolase activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
processing" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IEA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:DAAA02060458
EMBL:DAAA02060459 EMBL:DAAA02060460 EMBL:DAAA02060461
EMBL:DAAA02060462 EMBL:DAAA02060463 EMBL:DAAA02060464
EMBL:DAAA02060465 EMBL:DAAA02060466 EMBL:DAAA02060467
EMBL:DAAA02060468 EMBL:DAAA02060469 EMBL:DAAA02060470
EMBL:DAAA02060471 EMBL:DAAA02060472 EMBL:DAAA02060473
EMBL:DAAA02060474 EMBL:DAAA02060475 EMBL:DAAA02060476
EMBL:DAAA02060477 EMBL:DAAA02060478 EMBL:DAAA02060479
EMBL:DAAA02060480 EMBL:DAAA02060481 EMBL:DAAA02060482
EMBL:DAAA02060483 EMBL:DAAA02060484 EMBL:DAAA02060485
EMBL:DAAA02060486 EMBL:DAAA02060487 EMBL:DAAA02060488
EMBL:DAAA02060489 EMBL:DAAA02060490 EMBL:DAAA02060491
EMBL:DAAA02060492 EMBL:DAAA02060493 EMBL:DAAA02060494
IPI:IPI00920936 Ensembl:ENSBTAT00000028778 Uniprot:E1BEE6
Length = 1404
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 45/167 (26%), Positives = 82/167 (49%)
Query: 346 VVGIDCEWKPNYVKGCKMNKVSIMQIA-SDEMVFIFDLIKLAEDVPDVLDSCLTRILQSP 404
VVG D EW P + KG +++V+++Q+ ++ ++F + ++ P L +L++
Sbjct: 76 VVGFDIEWPP-FKKGT-LSRVALIQLCVAESKCYLFHISSMS-GFPQGLKM----LLENE 128
Query: 405 GILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQNVFKE--PKGGLSGLAEKILGAGL 462
I K G + D +L + ++ K L D+ N + L+GL + + G L
Sbjct: 129 AIKKAGVGIEQDQWKLLRDF-DIN-LKSIVELTDVANEKLKCIETWSLNGLVKYLFGKQL 186
Query: 463 NKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSCSQPTDV 507
K R R S+W + PL+++Q YAA DA I+ + + S P +
Sbjct: 187 LKDRSIRCSDWSRFPLTEDQKVYAATDAYAGFIIYQKLANLSDPVQI 233
>ASPGD|ASPL0000027694 [details] [associations]
symbol:AN5680 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 GO:GO:0003676 GO:GO:0005622
EMBL:AACD01000098 EMBL:BN001305 GO:GO:0004386 SUPFAM:SSF53098
GO:GO:0008408 RefSeq:XP_663284.1 ProteinModelPortal:Q5B1A0
EnsemblFungi:CADANIAT00003385 GeneID:2871971 KEGG:ani:AN5680.2
eggNOG:NOG302560 OrthoDB:EOG4578HD Uniprot:Q5B1A0
Length = 320
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 43/164 (26%), Positives = 78/164 (47%)
Query: 366 VSIMQIASDEMVFIFDLIKLAEDV--PDVLDSCLTRILQSPGILKLGYNFQCDIKQLA-- 421
+S +Q+AS + IF + + ++ D++ + L I+++PGI K G N + D +L
Sbjct: 17 ISTIQLASRNRIAIFHIARFMPNLNLDDLVPAKLKSIVENPGITKTGVNIRADCTRLRKY 76
Query: 422 ---HSYGELECFKHYEMLL---DIQNVFKEPKGGLSGLAEKILGAGLNK--TRRNSNWEQ 473
++ G E Y+++ + + + L+ ++ LG L K + R SNW Q
Sbjct: 77 LGINARGTFELSHLYKLIKYCHTTPQLINKHRVRLADQVQEHLGLPLAKGISVRCSNW-Q 135
Query: 474 RPLSQNQLEYAALDAVVLLQIFHHV---RSCSQPTDVSEGHDKI 514
+P++ Q YAA DA Q+F + R P HD++
Sbjct: 136 KPITAPQAHYAAADAYASYQLFVIMDAKRRALDPVPPLPAHDEL 179
>TIGR_CMR|APH_1098 [details] [associations]
symbol:APH_1098 "3''-5'' exonuclease family protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
GO:GO:0003676 GO:GO:0005622 EMBL:CP000235 GenomeReviews:CP000235_GR
SUPFAM:SSF53098 GO:GO:0008408 eggNOG:COG0349 KO:K03684
HOGENOM:HOG000003834 OMA:CTKIASR ProtClustDB:CLSK863722
RefSeq:YP_505646.1 ProteinModelPortal:Q2GJ05 STRING:Q2GJ05
GeneID:3930416 KEGG:aph:APH_1098 PATRIC:20950954
BioCyc:APHA212042:GHPM-1104-MONOMER Uniprot:Q2GJ05
Length = 204
Score = 117 (46.2 bits), Expect = 0.00015, P = 0.00015
Identities = 33/135 (24%), Positives = 68/135 (50%)
Query: 361 CKMNKVSIMQIASDEMVFIFDLIKLAED--VPDVLDSCLTRILQSPGILKLGYNFQCDIK 418
C+ ++V ++Q+++ L+K D P+ L +++ PG+LK+ + + D+
Sbjct: 31 CRRDRVCLVQLSAGNGDA--HLVKFDGDYSAPN-----LRKVISDPGVLKIFHFARFDVA 83
Query: 419 QLAHSYG--ELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPL 476
+ H +G C+ ++ + + G L L ++LG +NK +++S+W + L
Sbjct: 84 AIRHGFGMWATPCYCT-KIASRLVRTYTNHHG-LKDLCYELLGVKINKAQQSSDWGREVL 141
Query: 477 SQNQLEYAALDAVVL 491
+ QL YAA D + L
Sbjct: 142 TAEQLSYAAADVIYL 156
>TIGR_CMR|ECH_0300 [details] [associations]
symbol:ECH_0300 "putative ribonuclease D" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004525 "ribonuclease III
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 eggNOG:COG0349 KO:K03684
RefSeq:YP_507121.1 ProteinModelPortal:Q2GHG2 STRING:Q2GHG2
GeneID:3928062 KEGG:ech:ECH_0300 PATRIC:20576105
HOGENOM:HOG000063479 OMA:FHDCRQD ProtClustDB:CLSK749493
BioCyc:ECHA205920:GJNR-300-MONOMER Uniprot:Q2GHG2
Length = 387
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 365 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 424
K+ ++QIA + F+ D+ LA+D+ D+ S L I + I+K+ ++ + DI L +
Sbjct: 40 KLCLIQIAYGKEQFVIDV--LAKDM-DL--SVLGHIFYNESIIKVFHDCRQDIDALLTKF 94
Query: 425 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNK-TRRNSNWEQRPLSQNQLEY 483
E+ + + + G S L E+ LG L+K + + SNW RPLS ++++Y
Sbjct: 95 PEIPSPIFDTQIAAMFCCCYDNAVGYSKLVEQFLGISLDKLSLKRSNWALRPLSADKIQY 154
Query: 484 AALDAVVLLQIF 495
A D + L +++
Sbjct: 155 ALNDVIYLYELY 166
>DICTYBASE|DDB_G0282387 [details] [associations]
symbol:DDB_G0282387 "3'-5' exonuclease
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0004527 "exonuclease activity" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
dictyBase:DDB_G0282387 EMBL:AAFI02000047 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 eggNOG:NOG263976
RefSeq:XP_640019.1 ProteinModelPortal:Q54SM0
EnsemblProtists:DDB0238342 GeneID:8623543 KEGG:ddi:DDB_G0282387
OMA:CRRDSEI Uniprot:Q54SM0
Length = 390
Score = 86 (35.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 26/92 (28%), Positives = 52/92 (56%)
Query: 334 LHKAICHIEGCKVVGIDCEWKPNYVKGCKMNKVSIMQIASDE-MVFIFDLIKLAEDVPDV 392
++ AI I+ K++G+D E ++ K +S++QI++ +++FD+IK+ +V
Sbjct: 174 MNYAIHEIKKEKLIGLDIE----AIEMGKKGDISLVQISTPNGRIYLFDIIKMGANVTPF 229
Query: 393 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 424
L +L+S ILK+ ++ + D + L H Y
Sbjct: 230 KYG-LKEVLESVKILKVVHDCRRDSEILFHRY 260
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 471 WEQRPLSQNQLEYAALDAVVLLQIFHHVR 499
W +RPL ++ ++YA+LDA LL I++H++
Sbjct: 326 WAKRPLPKDFIDYASLDAACLLPIYYHIK 354
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 155 VKILEAFDVRLTDIEKAITQLKAQNEHRFDTA----KTVIEQYIFAMIDSQSYMTAVSLL 210
V + E +V+ DI++ I ++ NE K + Q +F M ++ + ++
Sbjct: 109 VPMSEFLEVKAFDIKEKIENIENLNEKEIKQKEREIKKIKNQIVFEMSREETSFDNIYMV 168
Query: 211 EHFS 214
+ S
Sbjct: 169 DCLS 172
>UNIPROTKB|B4I298 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7238 "Drosophila sechellia" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH480820 OrthoDB:EOG473N7C RefSeq:XP_002038237.1
ProteinModelPortal:B4I298 GeneID:6613768 KEGG:dse:Dsec_GM18710
FlyBase:FBgn0173615 Uniprot:B4I298
Length = 354
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +I+ L + + L + L ++ P
Sbjct: 160 MAFDMEWPFSFQTG--PGKSSVIQICVDEKCCYIYQLTNVKK-----LPAALVALINHPK 212
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++LA + E+ E +D+ N E G L L I
Sbjct: 213 VRLHGVNIKNDFRKLARDFPEVTAEPLIEKCVDLGLWCNEVCETGGRWSLERLTNFIAKK 272
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 273 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 304
>UNIPROTKB|B4PLB3 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7245 "Drosophila yakuba" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 EMBL:CM000160 GO:GO:0008408
GO:GO:0045950 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_002096183.1 ProteinModelPortal:B4PLB3 STRING:B4PLB3
EnsemblMetazoa:FBtr0271725 GeneID:6535554 KEGG:dya:Dyak_GE25207
FlyBase:FBgn0242291 Uniprot:B4PLB3
Length = 354
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K +++QI DE +I+ L L + L + L ++ P
Sbjct: 160 MAFDMEWPFSFQTG--PGKSAVIQICVDEKCCYIYQLTNLKK-----LPAVLVALINHPK 212
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++LA + E+ E +D+ N E G L L I
Sbjct: 213 VRLHGVNIKNDFRKLARDFPEVSAEPLIEKCVDLGLWCNEVCETGGRWSLERLTNFIAKK 272
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 273 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 304
>UNIPROTKB|B4QUF6 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7240 "Drosophila simulans" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 EMBL:CM000364
GO:GO:0045950 OrthoDB:EOG473N7C RefSeq:XP_002102953.1 PRIDE:B4QUF6
EnsemblMetazoa:FBtr0220088 GeneID:6727574 KEGG:dsi:Dsim_GD20178
FlyBase:FBgn0191656 Uniprot:B4QUF6
Length = 354
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI DE +I+ L + + L + L ++ P
Sbjct: 160 MAFDMEWPFSFQTG--PGKSSVIQICVDEKCCYIYQLTNVKK-----LPAALVALINHPK 212
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++LA + E+ E +D+ N E G L L I
Sbjct: 213 VRLHGVNIKNDFRKLARDFPEVTAEPLIEKCVDLGLWCNEVCETGGRWSLERLTNFIAKK 272
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 273 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 304
>TAIR|locus:504955936 [details] [associations]
symbol:AT2G32415 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] InterPro:IPR002121 InterPro:IPR002562
InterPro:IPR010997 InterPro:IPR012337 Pfam:PF00570 Pfam:PF01612
SMART:SM00474 EMBL:CP002685 GO:GO:0000166 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408 SUPFAM:SSF47819
KO:K12591 IPI:IPI00520495 RefSeq:NP_850189.5 UniGene:At.47141
ProteinModelPortal:F4ITQ6 SMR:F4ITQ6 PRIDE:F4ITQ6
EnsemblPlants:AT2G32415.1 GeneID:817803 KEGG:ath:AT2G32415
OMA:ICVGCGE Uniprot:F4ITQ6
Length = 891
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 367 SIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGE 426
+++QI++ E F+ D I L DV+ S L + P I K+ + D+ L +
Sbjct: 158 ALIQISTHEEDFLVDTIALH----DVM-SILRPVFSDPNICKVFHGADNDVIWLQRDF-H 211
Query: 427 LECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYAAL 486
+ ++ + V +P+ L+ L E + G NK + +W QRPLS+ + YA
Sbjct: 212 IYVVNMFDTAKACE-VLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYART 270
Query: 487 DAVVLLQIFHHVRS-CSQ-PTDVSEGHDKIEW 516
DA LL I + + Q TD S D+ +
Sbjct: 271 DAHYLLYIADSLTTELKQLATDSSSPDDRFHF 302
>UNIPROTKB|B4M401 [details] [associations]
symbol:WRNexo "Werner Syndrome-like exonuclease"
species:7244 "Drosophila virilis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS] [GO:0045950 "negative regulation of mitotic
recombination" evidence=ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005634 GO:GO:0046872
GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950
EMBL:CH940652 eggNOG:NOG266861 OrthoDB:EOG473N7C
RefSeq:XP_002056250.1 ProteinModelPortal:B4M401 STRING:B4M401
GeneID:6632852 KEGG:dvi:Dvir_GJ10837 FlyBase:FBgn0198106
InParanoid:B4M401 Uniprot:B4M401
Length = 330
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K S++QI +E +++ L KL +P + L +L
Sbjct: 136 LAFDMEWPFSFQTG--PGKSSVIQICVEERCCYVYQLSKLKR-IP----AALVALLNHSK 188
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++L + E+ E +D+ N E G L LA I
Sbjct: 189 VRLHGVNIKADFRKLERDFPEVAAEPLIEKCIDLGVWCNEVCETGGRWSLERLANFIAKK 248
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHV 498
++K++ R S W PL +NQL YAA+D + I+ +
Sbjct: 249 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYIGQVIYRDI 288
>WB|WBGene00003504 [details] [associations]
symbol:mut-7 species:6239 "Caenorhabditis elegans"
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000335 "negative regulation of transposition,
DNA-mediated" evidence=IMP] [GO:0016458 "gene silencing"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0005829 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0048471 GO:GO:0002119
GO:GO:0016246 GO:GO:0003676 GO:GO:0090305 SUPFAM:SSF53098
GO:GO:0008408 EMBL:Z22176 PIR:S40930 RefSeq:NP_499105.1
ProteinModelPortal:P34607 SMR:P34607 IntAct:P34607 STRING:P34607
PaxDb:P34607 EnsemblMetazoa:ZK1098.8 GeneID:176347
KEGG:cel:CELE_ZK1098.8 UCSC:ZK1098.8 CTD:176347 WormBase:ZK1098.8
eggNOG:NOG241966 GeneTree:ENSGT00390000006843 HOGENOM:HOG000019149
InParanoid:P34607 OMA:GFDMRND NextBio:892180 GO:GO:0000335
InterPro:IPR002782 Pfam:PF01927 Uniprot:P34607
Length = 910
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 35/107 (32%), Positives = 61/107 (57%)
Query: 416 DIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRP 475
D+K+LA + +++ E+L + FK L+ L +LG L+KT + SNW+ RP
Sbjct: 527 DLKRLAENVCDIDM----EILELPKKTFK-----LADLTHYLLGLELDKTEQCSNWQCRP 577
Query: 476 LSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVS 522
L + Q+ YAALDAVV+++ F + S + + +KI +S +++
Sbjct: 578 LRKKQIVYAALDAVVVVETFKKILSIVEEKNKDADIEKIVRESNVMA 624
>UNIPROTKB|P34607 [details] [associations]
symbol:mut-7 "Probable exonuclease mut-7" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 GO:GO:0005829 GO:GO:0005634 GO:GO:0009792
GO:GO:0040007 GO:GO:0048471 GO:GO:0002119 GO:GO:0016246
GO:GO:0003676 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:Z22176 PIR:S40930 RefSeq:NP_499105.1 ProteinModelPortal:P34607
SMR:P34607 IntAct:P34607 STRING:P34607 PaxDb:P34607
EnsemblMetazoa:ZK1098.8 GeneID:176347 KEGG:cel:CELE_ZK1098.8
UCSC:ZK1098.8 CTD:176347 WormBase:ZK1098.8 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 HOGENOM:HOG000019149 InParanoid:P34607
OMA:GFDMRND NextBio:892180 GO:GO:0000335 InterPro:IPR002782
Pfam:PF01927 Uniprot:P34607
Length = 910
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 35/107 (32%), Positives = 61/107 (57%)
Query: 416 DIKQLAHSYGELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRP 475
D+K+LA + +++ E+L + FK L+ L +LG L+KT + SNW+ RP
Sbjct: 527 DLKRLAENVCDIDM----EILELPKKTFK-----LADLTHYLLGLELDKTEQCSNWQCRP 577
Query: 476 LSQNQLEYAALDAVVLLQIFHHVRSCSQPTDVSEGHDKIEWKSYIVS 522
L + Q+ YAALDAVV+++ F + S + + +KI +S +++
Sbjct: 578 LRKKQIVYAALDAVVVVETFKKILSIVEEKNKDADIEKIVRESNVMA 624
>TIGR_CMR|GSU_0443 [details] [associations]
symbol:GSU_0443 "ribonuclease D, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0004525 "ribonuclease III
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR010997
InterPro:IPR012337 Pfam:PF00570 Pfam:PF01612 PROSITE:PS50967
SMART:SM00341 SMART:SM00474 GO:GO:0000166 GO:GO:0003676
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR
SUPFAM:SSF53098 GO:GO:0008408 Gene3D:1.10.150.80 SUPFAM:SSF47819
KO:K03684 RefSeq:NP_951502.1 ProteinModelPortal:Q74G09
GeneID:2686317 KEGG:gsu:GSU0443 PATRIC:22023634
HOGENOM:HOG000010987 OMA:LRETTFW ProtClustDB:CLSK924403
BioCyc:GSUL243231:GH27-436-MONOMER Uniprot:Q74G09
Length = 381
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 36/134 (26%), Positives = 66/134 (49%)
Query: 365 KVSIMQIASDEMVFIFDLIKLAEDVPDVLDSCLTRILQSPGILKLGYNFQCDIKQLAHSY 424
KV ++Q A I D LA PD+ S L + + I K+ + DI+ L +
Sbjct: 45 KVCLIQFAVPGYAAIVD--PLA--APDI--SPLAPLFANAAIRKVFHGADYDIRSLHRDF 98
Query: 425 GELECFKHYEMLLDIQNVFKEPKGGLSGLAEKILGAGLNKTRRNSNWEQRPLSQNQLEYA 484
G +E ++ ++ Q + E + GL+ K G L+K + ++W +RPL+ +EYA
Sbjct: 99 G-IEVNNLFDTMIACQ-LLGEREFGLAAQLRKRFGVELDKQYQRADWSRRPLTVGMIEYA 156
Query: 485 ALDAVVLLQIFHHV 498
D +L++++ +
Sbjct: 157 VKDTTLLIELYRQL 170
>FB|FBgn0038608 [details] [associations]
symbol:WRNexo "WRN exonuclease" species:7227 "Drosophila
melanogaster" [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS;IMP] [GO:0000738 "DNA catabolic process,
exonucleolytic" evidence=IC] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0045950 "negative regulation of mitotic
recombination" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
EMBL:AE014297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003676
SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0045950 GO:GO:0000738
eggNOG:NOG266861 OrthoDB:EOG473N7C EMBL:EF680279 EMBL:EF680280
EMBL:AY051647 EMBL:BT050502 RefSeq:NP_001163646.1
RefSeq:NP_650715.3 UniGene:Dm.4528 ProteinModelPortal:Q9VE86
SMR:Q9VE86 MINT:MINT-1678399 STRING:Q9VE86
EnsemblMetazoa:FBtr0083586 GeneID:42208 KEGG:dme:Dmel_CG7670
UCSC:CG7670-RA CTD:42208 FlyBase:FBgn0038608
GeneTree:ENSGT00660000096992 InParanoid:Q961E1 PhylomeDB:Q9VE86
ChiTaRS:WRNexo GenomeRNAi:42208 NextBio:827674 Bgee:Q9VE86
Uniprot:Q9VE86
Length = 353
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 347 VGIDCEWKPNYVKGCKMNKVSIMQIASDEMV-FIFDLIKLAEDVPDVLDSCLTRILQSPG 405
+ D EW ++ G K +++QI DE +I+ L + + L + L ++ P
Sbjct: 159 MAFDMEWPFSFQTG--PGKSAVIQICVDEKCCYIYQLTNVKK-----LPAALVALINHPK 211
Query: 406 ILKLGYNFQCDIKQLAHSYGELECFKHYEMLLDIQ---NVFKEPKG--GLSGLAEKILGA 460
+ G N + D ++LA + E+ E +D+ N E G L L I
Sbjct: 212 VRLHGVNIKNDFRKLARDFPEVTAEPLIEKCVDLGLWCNEVCETGGRWSLERLTNFIAKK 271
Query: 461 GLNKTR--RNSNWEQRPLSQNQLEYAALDAVV 490
++K++ R S W PL +NQL YAA+D +
Sbjct: 272 AMDKSKKVRMSKWHVIPLDENQLMYAAIDVYI 303
>MGI|MGI:1922485 [details] [associations]
symbol:Exd2 "exonuclease 3'-5' domain containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 MGI:MGI:1922485 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
eggNOG:NOG68878 OrthoDB:EOG4GTKD1 EMBL:BC018508 IPI:IPI00124568
UniGene:Mm.206631 ProteinModelPortal:Q8VEG4 SMR:Q8VEG4
STRING:Q8VEG4 PhosphoSite:Q8VEG4 PaxDb:Q8VEG4 PRIDE:Q8VEG4
InParanoid:Q8VEG4 Bgee:Q8VEG4 CleanEx:MM_EXDL2
Genevestigator:Q8VEG4 GermOnline:ENSMUSG00000032705 Uniprot:Q8VEG4
Length = 496
Score = 119 (46.9 bits), Expect = 0.00066, P = 0.00066
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 393 LDSCLTRILQSPGILKLGYNFQCDIKQLAHSYGELE--CFK-HYEMLLDIQNVFKEPKGG 449
L L IL ILK+G D +L YG + C Y + N+
Sbjct: 23 LPRTLLDILADGAILKVGVGCSEDANKLLQDYGLIVRGCLDLRYLAMKQGNNILCNGLS- 81
Query: 450 LSGLAEKILGAGLNKTR--RNSNWEQRPLSQNQLEYAALDAVVLLQIFHHVRSC--SQPT 505
L LAE IL L+K+ R SNW+ L+++Q+ YAA DA + + +F H+ S+ +
Sbjct: 82 LKSLAETILNFPLDKSLLLRCSNWDAENLTEDQVTYAARDAQISVALFLHLLGYPFSRDS 141
Query: 506 DVSEGHDKIEWK 517
E D+I W+
Sbjct: 142 YEEESTDQINWQ 153
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 547 524 0.00090 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 622 (66 KB)
Total size of DFA: 325 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.65u 0.11s 41.76t Elapsed: 00:00:02
Total cpu time: 41.66u 0.12s 41.78t Elapsed: 00:00:02
Start: Mon May 20 15:56:16 2013 End: Mon May 20 15:56:18 2013