BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009003
(547 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225433316|ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
gi|296083755|emb|CBI23744.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/518 (73%), Positives = 420/518 (81%), Gaps = 20/518 (3%)
Query: 15 KTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASY 74
KT RRKRT + E+L+SL WN S D DPF+ VGS+EL+GGFLSLEEIDE+ Y
Sbjct: 4 KTPNARRKRTAVNPDLERLESLPWNPSLPDVD-DPFSLFVGSDELEGGFLSLEEIDESEY 62
Query: 75 NLQI--PKPE--KGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNE 130
L+I P PE KG P + SKKRK S N D G G EDG+ ++E + KN
Sbjct: 63 GLEIHEPGPEDKKGNPKQSKKSKKRKSSGDN-----DSSGGGVEDGT---EEEVVDKKNF 114
Query: 131 TGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSI 190
KKKKKKK KK +T EES VSN DD E + V+EAE F WNELRLHPLLMKSI
Sbjct: 115 KKKKKKKKKVTKKNQTNEESATVSNDKDDVEGDSVDEAE----FYEWNELRLHPLLMKSI 170
Query: 191 YRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLE 250
+RL FK+PTPIQKACIPAAAHQGKDV+GA+ETGSGKTLA GLPI+QRLLEEREKAA+ L
Sbjct: 171 HRLGFKQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPILQRLLEEREKAAEPLA 230
Query: 251 DKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERL 310
+ EE KYA G LRALIITPTRELALQVTDHLK VAKG NVRVVPIVGGMSTEKQERL
Sbjct: 231 ENSEE--KYAEGGILRALIITPTRELALQVTDHLKEVAKGTNVRVVPIVGGMSTEKQERL 288
Query: 311 LKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 370
LKARPE+VVGTPGRLWELMS GE HLVELH+LSFFVLDEADRM+ENGHF ELQSIID+LP
Sbjct: 289 LKARPEIVVGTPGRLWELMSRGEDHLVELHSLSFFVLDEADRMVENGHFHELQSIIDILP 348
Query: 371 MTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN-G 429
T+GS + S+ T+NC TVS++QRKKRQT VFSATIALSADFRKKLK G+L+SKQ +N G
Sbjct: 349 KTSGSMESLSQNTENCFTVSNIQRKKRQTFVFSATIALSADFRKKLKRGALRSKQLMNDG 408
Query: 430 LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRT 489
LNSIETLSERAGMR N AIVDLTN ++ANKLEESFIEC+EEDKDAYLYYILSVHGQGRT
Sbjct: 409 LNSIETLSERAGMRPNAAIVDLTNASIMANKLEESFIECREEDKDAYLYYILSVHGQGRT 468
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
IVFCTSIAALRH SSLL+ILGI+VWTLHAQMQQRARLK
Sbjct: 469 IVFCTSIAALRHTSSLLRILGINVWTLHAQMQQRARLK 506
>gi|356520440|ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
max]
Length = 810
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/526 (68%), Positives = 423/526 (80%), Gaps = 16/526 (3%)
Query: 12 HSKKTKPNRRKRTRKGG-EAEKLDSLKWNHSFSA-EDNDPFAFLVGSNELDGGFLSLEEI 69
+S + KP R++ + K E ++LDSL WN + +D+D F+ +GSNEL+GGFLSLEEI
Sbjct: 9 NSSQRKPKRKRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELEGGFLSLEEI 68
Query: 70 DEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKN 129
DEA Y L IP+PE K K ++ + ++ DG D + V+ + +++LK+
Sbjct: 69 DEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQ--DGVDSACSDDTVVEAELDESLKS 126
Query: 130 ETGKKKKKKKK-----GKKIKTVEESVA--VSNGPDDAEEELVNEAEISTEFDAWNELRL 182
+ KKKKKK K ++ +TVE S A +N DD EE V+E TEF AWNELRL
Sbjct: 127 KEKKKKKKKTKNKKKDAREDQTVEPSDAGLDTNVKDDIGEEDVDE----TEFYAWNELRL 182
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
HPLL+K+I +L FKEPTPIQKACIPAAAHQGKDV+GAAETGSGKTLAFGLPI+QRLLEER
Sbjct: 183 HPLLLKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEER 242
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGM 302
EKA M+ ++GEE EKYA G LRALII PTRELALQVTDHLK VAK INVRV PIVGG+
Sbjct: 243 EKAGNMVGERGEEPEKYASTGLLRALIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGI 302
Query: 303 STEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 362
EKQERLLKA+PE+VVGTPGRLWELMS GEKHLVELH+LSFFVLDEADRM++NGHF+EL
Sbjct: 303 LAEKQERLLKAKPEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKEL 362
Query: 363 QSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 422
QSIIDMLPM+N S + S+ Q+CVTVSS QRKKRQTLVFSAT+ALS+DFRKKLK GS+K
Sbjct: 363 QSIIDMLPMSNNSAEDNSQHVQSCVTVSSYQRKKRQTLVFSATVALSSDFRKKLKRGSIK 422
Query: 423 SKQSV-NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL 481
KQS+ +GLNSIETLSERAGMR+N AI+DLTN +LA KLEESFIEC+EEDKDAYLYYIL
Sbjct: 423 QKQSLTDGLNSIETLSERAGMRSNAAIIDLTNPSILATKLEESFIECREEDKDAYLYYIL 482
Query: 482 SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+VHGQGRTIVFCTSIAALRHISS+L+ILGI+VWTLHAQMQQRARLK
Sbjct: 483 TVHGQGRTIVFCTSIAALRHISSILRILGINVWTLHAQMQQRARLK 528
>gi|357505253|ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 798
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/522 (65%), Positives = 402/522 (77%), Gaps = 24/522 (4%)
Query: 17 KPNRRKRTRKGGEAE--KLDSLKWNHSFSA----EDNDP-FAFLVGSNELDGGFLSLEEI 69
K R+ RT K +AE + DSL WN S +DND F+ GSNEL+GGFLSLEEI
Sbjct: 8 KSKRKNRTVKPHDAELDRFDSLPWNSSIPQPDENDDNDASFSLFTGSNELEGGFLSLEEI 67
Query: 70 DEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKN 129
DEA Y L IP PE +K NSK K+S+ ++D G+ D S + ++K K
Sbjct: 68 DEAEYGLNIPDPENH--DRKHNSKPDKKSNKQKQDGACSGGETMNDESIKSEVKKKKKKK 125
Query: 130 ETGKKKKKKKKGKKIKTVEESVAVSNGP--DDAEEELVNEAEISTEFDAWNELRLHPLLM 187
+ K+ +K VE S N D +EE ++E TE+ AWNELRLHP LM
Sbjct: 126 KNKDAKENQK-------VELSNTGVNADVKDSVDEENIDE----TEYYAWNELRLHPRLM 174
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAK 247
K+I++L FKEPTPIQKAC+PAAAHQGKDVIGAAETGSGKTLAFGLPI+QRLLEEREKA
Sbjct: 175 KAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAES 234
Query: 248 MLEDKGEEA-EKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEK 306
+ GEEA EKYA G LR+LII PTRELALQV HLK VAK INVRV IVGG+ EK
Sbjct: 235 ISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGGILPEK 294
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
QERLLKARPE+VV TPGRLWELMS GEKHL+ELH+LSFFVLDEADRM+++GHF+ELQSII
Sbjct: 295 QERLLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKELQSII 354
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ- 425
DMLPM+N S++ S+ QNCVTVSS+Q+KKRQTLVFSAT+ALSADFRKKLK GS++ KQ
Sbjct: 355 DMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQKKQL 414
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
S +GL+SIETLSERAGMR N AI+DLTN +LA K+EESFIEC E+DKDA+LYYIL+VHG
Sbjct: 415 STDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTVHG 474
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
QGRTIVFCTSIAALRHISS+L+ILG++VWTLHAQMQQRARLK
Sbjct: 475 QGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLK 516
>gi|255554328|ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 496
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/502 (69%), Positives = 393/502 (78%), Gaps = 19/502 (3%)
Query: 1 MAAS-SPLLTSEHSKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNEL 59
MAA+ SPL +S K +RKR + E E+ DSL WN S S ++DPF+ VGS+EL
Sbjct: 1 MAANLSPLEKLPNSNKKVKWKRKRNNEDPELERFDSLSWNSSLS--EDDPFSGFVGSHEL 58
Query: 60 DGGFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGV 119
+GGFLSLEEIDE Y +IPKPEK K K+ + ++ D DG E
Sbjct: 59 EGGFLSLEEIDEVDYGFEIPKPEK--------GKTGKKLKSKKQKHNDADGSVKEKEKEE 110
Query: 120 QKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNE 179
+ E + K + KKKKK K+ +K E+ AVSNG DD + E V+EAE F AWNE
Sbjct: 111 KTLENEKKKKKRKKKKKKAKETQK---NEQPAAVSNGEDDTDGESVDEAE----FHAWNE 163
Query: 180 LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLL 239
LRLHPLLMKSIYRL FKEPTPIQKACIP AAHQGKDVIGAAETGSGKTLAFGLPI+QRLL
Sbjct: 164 LRLHPLLMKSIYRLGFKEPTPIQKACIPPAAHQGKDVIGAAETGSGKTLAFGLPILQRLL 223
Query: 240 EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIV 299
EER+KAA L++ GEEAEKY P G LRALIITPTRELALQVTDHLK A GIN++VVPIV
Sbjct: 224 EERDKAANYLDEMGEEAEKYGPTGLLRALIITPTRELALQVTDHLKEAAMGINIKVVPIV 283
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 359
GGMSTEKQERLLKARPE++VGTPGRLWELMSGGE HLVELH+LSFFVLDEADRMIENGHF
Sbjct: 284 GGMSTEKQERLLKARPEIIVGTPGRLWELMSGGESHLVELHSLSFFVLDEADRMIENGHF 343
Query: 360 RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 419
RELQSIIDMLPM +GS +G S+ TQNCVT+S+LQRKKRQT VFSATIALS DFRKKLK G
Sbjct: 344 RELQSIIDMLPMASGSVEGLSQNTQNCVTLSNLQRKKRQTFVFSATIALSTDFRKKLKRG 403
Query: 420 SLKSKQ-SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLY 478
SLK KQ + +GLNSIE LSERAGMR N AI+DLTN +LA+KLEESFIEC+E+DKDAYLY
Sbjct: 404 SLKPKQLTADGLNSIENLSERAGMRPNAAIIDLTNASILAHKLEESFIECREDDKDAYLY 463
Query: 479 YILSVHGQGRTIVFCTSIAALR 500
YILSV RTIVFCTSIAALR
Sbjct: 464 YILSVSWTSRTIVFCTSIAALR 485
>gi|449458872|ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
sativus]
Length = 848
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/574 (61%), Positives = 423/574 (73%), Gaps = 53/574 (9%)
Query: 1 MAASSPLLTSEHSKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELD 60
MAA S TS ++ K RK+T+K E E+LDSL WN S +D + +GSN+L+
Sbjct: 1 MAAESTQSTSSQKRRLK---RKKTQKDPEFERLDSLPWNSSIPIDDT--LSAFIGSNDLE 55
Query: 61 GGFLSLEEIDEASYNLQIPKPEKGK----PGKKLNSKKRKRSSANE-EDSGDGDGDG-DE 114
GGFLSLEEIDEA Y + IP+P+ K P N++K ++++A+ ED+ G D D+
Sbjct: 56 GGFLSLEEIDEAEYGMVIPEPDTRKHKLIPKASGNTRKEEQNNADYCEDASRGSNDSIDK 115
Query: 115 DGSGVQKQEEKNLKNETGKKKKKKKKG-KKIKTVEESVAVSNGPDDAE------------ 161
+ +G + + K + KKKKKKKK ++ T E+ VA+ G +D +
Sbjct: 116 EAAGHNVNTKTSKKGKKEKKKKKKKKVIHEVPTAEKDVAIDIGGNDNDGIETEIGDEMDD 175
Query: 162 ---------------------------EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQ 194
+E+ +A TE+ AWNELRLHPLLMKSIY+L
Sbjct: 176 DDHLETEKKQQKKEKETKDHGIDKEIRDEVEKDAVDETEYYAWNELRLHPLLMKSIYKLG 235
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
FKEPT IQKACIPAAA+QGKDV+GAAETGSGKTLAFGLPI+QR L+EREK+ KM E+KG
Sbjct: 236 FKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGV 295
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
+A+KYAPK LRALIITPTRELALQVTDHLK VA GI++RVVPIVGGMSTEKQERLL+ R
Sbjct: 296 DAKKYAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTR 355
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 374
PEVVVGTPGRLWELMSGGEKHLVEL LSFFVLDEADRMIENGHFRELQSIIDMLP+TNG
Sbjct: 356 PEVVVGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNG 415
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS-VNGLNSI 433
S + + +N +T QRKKRQTLVFSAT++LS+DFRKKLK S K QS ++GLNSI
Sbjct: 416 SAENL-QNAENSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSI 474
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFC 493
E LSERAG+R NVA+++LTN VLAN LEESFIEC+EEDKDAYLYYILSV+GQGRTIVFC
Sbjct: 475 EALSERAGIRPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFC 534
Query: 494 TSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
TSIAALRHI++LL I+G++V TLHAQ QQRARLK
Sbjct: 535 TSIAALRHIAALLSIVGVNVLTLHAQRQQRARLK 568
>gi|449509127|ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
[Cucumis sativus]
Length = 784
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/570 (61%), Positives = 419/570 (73%), Gaps = 65/570 (11%)
Query: 1 MAASSPLLTSEHSKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELD 60
MAA S TS ++ K RK+T+K E E+LDSL WN S +D + +GSN+L+
Sbjct: 1 MAAESTQSTSSQKRRLK---RKKTQKDPEFERLDSLPWNSSIPIDDT--LSAFIGSNDLE 55
Query: 61 GGFLSLEEIDEASYNLQIPKPEKGK----PGKKLNSKKRKRSSANE-EDS---------- 105
GGFLSLEEIDEA Y + IP+P+ K P NS+K ++++A+ ED+
Sbjct: 56 GGFLSLEEIDEAEYGMVIPEPDTRKHKLIPKASGNSRKEEQNNADYCEDASRAKREKEKK 115
Query: 106 ----------------------GDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKK--- 140
G D DG E G + ++ +L+ E ++KK+K+
Sbjct: 116 KKKKKKVIHEVPTAEKDVAIDIGGNDNDGIETEIGDEMDDDDHLETEKKQQKKEKETKDH 175
Query: 141 --GKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEP 198
K+I+ D+ E++ V+E TE+ AWNELRLHPLLMKSIY+L FKEP
Sbjct: 176 GIDKEIR------------DEVEKDAVDE----TEYYAWNELRLHPLLMKSIYKLGFKEP 219
Query: 199 TPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEK 258
T IQKACIPAAA+QGKDV+GAAETGSGKTLAFGLPI+QR L+EREK+ KM E+KG +A+K
Sbjct: 220 TAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGVDAKK 279
Query: 259 YAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVV 318
YAPK LRALIITPTRELALQVTDHLK VA GI++RVVPIVGGMSTEKQERLL+ RPEVV
Sbjct: 280 YAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTRPEVV 339
Query: 319 VGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKG 378
VGTPGRLWELMSGGEKHLVEL LSFFVLDEADRMIENGHFRELQSIIDMLP+TNGS +
Sbjct: 340 VGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNGSAEN 399
Query: 379 QSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS-VNGLNSIETLS 437
+ +N +T QRKKRQTLVFSAT++LS+DFRKKLK S K QS ++GLNSIE LS
Sbjct: 400 L-QNAENSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSIEALS 458
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
ERAG+R NVA+++LTN VLAN LEESFIEC+EEDKDAYLYYILSV+GQGRTIVFCTSIA
Sbjct: 459 ERAGIRPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFCTSIA 518
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLK 527
ALRHI++LL I+G++V TLHAQ QQRARLK
Sbjct: 519 ALRHIAALLSIVGVNVLTLHAQRQQRARLK 548
>gi|224107545|ref|XP_002314517.1| predicted protein [Populus trichocarpa]
gi|222863557|gb|EEF00688.1| predicted protein [Populus trichocarpa]
Length = 847
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/476 (65%), Positives = 370/476 (77%), Gaps = 30/476 (6%)
Query: 1 MAA---SSPLLTSEHSKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSN 57
MAA + P ++S+ S K +RKRT E ++LDSL WN S S +DPF+ + GS+
Sbjct: 1 MAAVTEAEPRVSSKQSNNKK-GKRKRTHIDPEIDRLDSLPWNSSIS--QDDPFSVIAGSH 57
Query: 58 ELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDED-- 115
EL+GGFLSLEEIDE Y L+IP G KK +++ + ++ D D DG E+
Sbjct: 58 ELEGGFLSLEEIDEGDYGLEIP-------GLDKKVKKERKNKSKKQKDSDADADGVEEEV 110
Query: 116 ---GSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEIST 172
G V+ ++++ + + K K+ + V+E+ +VSN DD E E V+E T
Sbjct: 111 EEEGINVEDKKKRKKRKKKKKAKESSR-------VDETTSVSNNKDDVEGESVDE----T 159
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
EF WNELRLHPLLMKSIYRL FKEPTPIQKACIPAAAHQGKDV+GAAETGSGKTLAFGL
Sbjct: 160 EFYGWNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGL 219
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+QRLLEE++KA+ M ++ GEEAE++APKG LRALIITPTRELA+QVTDH K A GIN
Sbjct: 220 PILQRLLEEQDKASNMGDNVGEEAERFAPKGLLRALIITPTRELAIQVTDHFKEAAHGIN 279
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+RVV IVGGMSTEKQERLLKARPE++VGTPGRLWELMSGGEKHLVELH+LSFFVLDEADR
Sbjct: 280 IRVVSIVGGMSTEKQERLLKARPEIIVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADR 339
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
MIENGHFRELQSIIDMLPM +GS GQS+ ++NC T+S++Q KKRQT VFSATIALSADF
Sbjct: 340 MIENGHFRELQSIIDMLPMASGSIGGQSQSSENCQTLSNMQIKKRQTFVFSATIALSADF 399
Query: 413 RKKLKHGSLKSKQSV-NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
RKKLK GSLKSKQS+ +GLNSIE LSERAGMRAN AI+DLTN +LANKLEESFIE
Sbjct: 400 RKKLKRGSLKSKQSMADGLNSIEMLSERAGMRANAAIIDLTNASILANKLEESFIE 455
>gi|297834580|ref|XP_002885172.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297331012|gb|EFH61431.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 831
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 276/381 (72%), Positives = 320/381 (83%), Gaps = 1/381 (0%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+ S AVS D EE V EI EF AW +RLHPLLMKSIY L FK+PT IQKAC
Sbjct: 161 DTSDAVSCDDDYKVEEQVEGEEIPPEFSAWGLMRLHPLLMKSIYHLGFKQPTEIQKACFS 220
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
AA+QGKDVIGAAETGSGKTLAFGLPI+QRLL+EREK K+ KGE+A+KYA G+LRA
Sbjct: 221 IAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEKAQKYAADGYLRA 280
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LIITPTRELALQVTDHLK A+ +NV+VVPIVGGMS+ KQERLLK +PE+VVGTPGRLWE
Sbjct: 281 LIITPTRELALQVTDHLKNAAENLNVKVVPIVGGMSSAKQERLLKGKPEIVVGTPGRLWE 340
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
LMS GEKHLVELH+LSFFVLDEADRM+E+GHFRELQSIID+LP+T+ N+G+ + Q+
Sbjct: 341 LMSAGEKHLVELHSLSFFVLDEADRMVESGHFRELQSIIDLLPVTDRPNEGKMQTVQSSD 400
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-LNSIETLSERAGMRANV 446
TVS+ +KKRQT VFSATIALS+DFRKKLK GS KSK S +G +NSIE LSERAGMR +V
Sbjct: 401 TVSNAPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKPSSSGEVNSIEVLSERAGMRDSV 460
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
AI+DLT +LA K+EESFI+C+EE+KDAYLYYILSVHGQGRTIVFCTS+AALRHI +LL
Sbjct: 461 AIIDLTTASILAPKIEESFIKCEEEEKDAYLYYILSVHGQGRTIVFCTSVAALRHICALL 520
Query: 507 KILGIDVWTLHAQMQQRARLK 527
KILG+DV L++ M+QRARLK
Sbjct: 521 KILGLDVCKLYSDMKQRARLK 541
>gi|227202696|dbj|BAH56821.1| AT3G16840 [Arabidopsis thaliana]
Length = 827
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 276/384 (71%), Positives = 323/384 (84%), Gaps = 1/384 (0%)
Query: 145 KTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKA 204
K + S AVS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKA
Sbjct: 161 KNQDASAAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKA 220
Query: 205 CIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH 264
C AA+QGKDVIGAAETGSGKTLAFGLPI+QRLL+EREK K+ KGEEA+KYA G+
Sbjct: 221 CFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGY 280
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
LRALIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGR
Sbjct: 281 LRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGR 340
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ N+G+++ +
Sbjct: 341 LWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDRPNEGKTQTVK 400
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-LNSIETLSERAGMR 443
+ TV ++ +KKRQT VFSATIALS+DFRKKLK GS KSKQS +G +NSIE LSERAGMR
Sbjct: 401 SNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMR 460
Query: 444 ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHIS 503
NVAI+DLT +LA K+EESFI+C+E++KDAYLYYILSVHGQGRTIVFCTS+ LRHIS
Sbjct: 461 DNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHIS 520
Query: 504 SLLKILGIDVWTLHAQMQQRARLK 527
LLKILG+DV TL ++M+QRARLK
Sbjct: 521 GLLKILGLDVCTLFSEMKQRARLK 544
>gi|79404523|ref|NP_188307.3| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
gi|374095486|sp|Q93Y39.3|RH13_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|332642351|gb|AEE75872.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
Length = 826
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 323/381 (84%), Gaps = 1/381 (0%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+++ AVS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
AA+QGKDVIGAAETGSGKTLAFGLPI+QRLL+EREK K+ KGEEA+KYA G+LRA
Sbjct: 223 VAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRA 282
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWE
Sbjct: 283 LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWE 342
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
LMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ N+G+++ ++
Sbjct: 343 LMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSND 402
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-LNSIETLSERAGMRANV 446
TV ++ +KKRQT VFSATIALS+DFRKKLK GS KSKQS +G +NSIE LSERAGMR NV
Sbjct: 403 TVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
AI+DLT +LA K+EESFI+C+E++KDAYLYYILSVHGQGRTIVFCTS+ LRHIS LL
Sbjct: 463 AIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLL 522
Query: 507 KILGIDVWTLHAQMQQRARLK 527
KILG+DV TL ++M+QRARLK
Sbjct: 523 KILGLDVCTLFSEMKQRARLK 543
>gi|7939577|dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 832
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 323/381 (84%), Gaps = 1/381 (0%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+++ AVS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
AA+QGKDVIGAAETGSGKTLAFGLPI+QRLL+EREK K+ KGEEA+KYA G+LRA
Sbjct: 223 VAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRA 282
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWE
Sbjct: 283 LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWE 342
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
LMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ N+G+++ ++
Sbjct: 343 LMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSND 402
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-LNSIETLSERAGMRANV 446
TV ++ +KKRQT VFSATIALS+DFRKKLK GS KSKQS +G +NSIE LSERAGMR NV
Sbjct: 403 TVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
AI+DLT +LA K+EESFI+C+E++KDAYLYYILSVHGQGRTIVFCTS+ LRHIS LL
Sbjct: 463 AIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLL 522
Query: 507 KILGIDVWTLHAQMQQRARLK 527
KILG+DV TL ++M+QRARLK
Sbjct: 523 KILGLDVCTLFSEMKQRARLK 543
>gi|15450790|gb|AAK96666.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 797
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 323/381 (84%), Gaps = 1/381 (0%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+++ AVS DD EE V E EI EF AW+ +RLHPLLMKSIYRL FKEPT IQKAC
Sbjct: 163 QDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFN 222
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
AA+QGKDVIGAAETGSGKTLAFGLPI+QRLL+EREK K+ KGEEA+KYA G+LRA
Sbjct: 223 VAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRA 282
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LIITPTRELALQVT+HL+ AK ++V+VVPIVGGM +EKQER LK +PE+VV TPGRLWE
Sbjct: 283 LIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWE 342
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
LMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+ N+G+++ ++
Sbjct: 343 LMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSND 402
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-LNSIETLSERAGMRANV 446
TV ++ +KKRQT VFSATIALS+DFRKKLK GS KSKQS +G +NSIE LSERAGMR NV
Sbjct: 403 TVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNV 462
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
AI+DLT +LA K+EESFI+C+E++KDAYLYYILSVHGQGRTIVFCTS+ LRHIS LL
Sbjct: 463 AIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLL 522
Query: 507 KILGIDVWTLHAQMQQRARLK 527
KILG+DV TL ++M+QRARLK
Sbjct: 523 KILGLDVCTLFSEMKQRARLK 543
>gi|414586362|tpg|DAA36933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 842
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 317/540 (58%), Positives = 375/540 (69%), Gaps = 33/540 (6%)
Query: 15 KTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASY 74
K K NR K+ K A+ D L S ED PF L G E GGFL LEEIDEA +
Sbjct: 28 KNKKNRSKKQPKRAGADT-DGLSSGASTMVED--PFFVLAGGKE--GGFLDLEEIDEADF 82
Query: 75 NL----------QIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEE 124
+ + + K KK +KKRKR E SGD + D V+K E+
Sbjct: 83 GIFGGVLDDVGQSVEEAGKDHGKKKKKTKKRKRGGDGEGFSGDAALVVENDQVDVEKVEK 142
Query: 125 KNLKNETGKKKKKKKKGKKIKTV---------EESVA---VSNGPDDAEEELVNEAE--I 170
K E G KK K+K K + V +E VA + DD E NE + I
Sbjct: 143 KVEDGEKGDKKGKRKMNMKKRKVKDNEMNRESDEDVASDKAEDMQDDTENMEQNEDDELI 202
Query: 171 STEFD--AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E D AW ELRLHPLL+K++ RL FKEPTPIQK+C PAAAH+GKDVIGAAETGSGKTL
Sbjct: 203 LGEDDVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTL 262
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
AFGLP++QRLLEEREKA + L+ + E+ E+ + LRALI+TPTRELA QV DHLK VA
Sbjct: 263 AFGLPVLQRLLEEREKATR-LQQEDEKMEERSCGSPLRALILTPTRELAKQVCDHLKDVA 321
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
K + + VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLVELH+LSFF+LD
Sbjct: 322 KFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILD 381
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRMIE GHFRELQSII+MLP+TNGS++ + NC TV LQ KKRQT VFSAT+AL
Sbjct: 382 EADRMIERGHFRELQSIIEMLPLTNGSDEQAARTMPNCETVPILQIKKRQTFVFSATLAL 441
Query: 409 SADFRKKLKHGSLKSKQSV-NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
S++FRKKLK G SK S + ++SIE LS++AGM++N IVDLT +L KLEESFIE
Sbjct: 442 SSNFRKKLKRGLSTSKASTPDDVSSIEALSKQAGMKSNAEIVDLTKASILPEKLEESFIE 501
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
C EEDKDAYLYYILSVHGQGRTI+FCTSIAALRHISS+L+ILGI+V T HAQMQQRAR+K
Sbjct: 502 CSEEDKDAYLYYILSVHGQGRTIIFCTSIAALRHISSILRILGINVLTNHAQMQQRARMK 561
>gi|293332967|ref|NP_001169277.1| uncharacterized protein LOC100383140 [Zea mays]
gi|224028341|gb|ACN33246.1| unknown [Zea mays]
Length = 842
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/540 (58%), Positives = 374/540 (69%), Gaps = 33/540 (6%)
Query: 15 KTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASY 74
K K NR K+ K A+ D L S ED PF L G E GGFL LEEIDEA +
Sbjct: 28 KNKKNRSKKQPKRAGADT-DGLSSGASTMVED--PFFVLAGGKE--GGFLDLEEIDEADF 82
Query: 75 NL----------QIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEE 124
+ + + K KK +KKRKR E SGD + D V+K E+
Sbjct: 83 GIFGGVLDDVGQSVEEAGKDHGKKKKKTKKRKRGGDGEGFSGDAALVVENDQVDVEKVEK 142
Query: 125 KNLKNETGKKKKKKKKGKKIKTV---------EESVA---VSNGPDDAEEELVNEAE--I 170
K E G KK K+K K + V +E VA + DD E NE + I
Sbjct: 143 KVEDGEKGDKKGKRKMNMKKRKVKDNEMNRESDEDVASDKAEDMQDDTENMEQNEDDELI 202
Query: 171 STEFD--AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E D AW ELRLHPLL+K++ RL FKEPTPIQK+C PAAAH+GKDVIGAAETGSGKTL
Sbjct: 203 LGEDDVSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTL 262
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
AFGLP++QRLLEEREKA + L+ + E+ E+ + LRALI+TPTRELA QV DHLK VA
Sbjct: 263 AFGLPVLQRLLEEREKATR-LQQEDEKMEERSCGSPLRALILTPTRELAKQVCDHLKDVA 321
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
K + + VVPIVGG+S EKQERLLK +PE+VVGTPGRLWE MS +HLVELH+LSFF+LD
Sbjct: 322 KFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWEHMSMNNQHLVELHSLSFFILD 381
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRMIE GHFRELQSII+MLP+TNGS + + NC TV LQ KKRQT VFSAT+AL
Sbjct: 382 EADRMIERGHFRELQSIIEMLPLTNGSGEQAARTMPNCETVPILQIKKRQTFVFSATLAL 441
Query: 409 SADFRKKLKHGSLKSKQSV-NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
S++FRKKLK G SK S + ++SIE LS++AGM++N IVDLT +L KLEESFIE
Sbjct: 442 SSNFRKKLKRGLSTSKASTPDDVSSIEALSKQAGMKSNAEIVDLTKASILPEKLEESFIE 501
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
C EEDKDAYLYYILSVHGQGRTI+FCTSIAALRHISS+L+ILGI+V T HAQMQQRAR+K
Sbjct: 502 CSEEDKDAYLYYILSVHGQGRTIIFCTSIAALRHISSILRILGINVLTNHAQMQQRARMK 561
>gi|357167963|ref|XP_003581416.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like
[Brachypodium distachyon]
Length = 872
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 289/507 (57%), Positives = 357/507 (70%), Gaps = 35/507 (6%)
Query: 48 DPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPG-KKLNSKKRKRSSANEEDSG 106
DPF L G E GGFL LEEID A + + E + +K+ S ++K+ + G
Sbjct: 93 DPFFVLAGGKE--GGFLELEEIDGADFGIFGGTVEDVEASDRKVGSDQKKKKKKKKRKRG 150
Query: 107 DGDG--DGDEDGSGVQKQ----------------------EEKNLKNETGKKKKKKKKGK 142
G DGD+DG + +K +T + + K+
Sbjct: 151 HGAERLDGDDDGDCASGELVFESKEEGNKGEKKGKSKKRNRKKRKVKDTEQDSESKEDVD 210
Query: 143 KIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQ 202
++ +++ + +D E +L + EF AW ELRLHPLL+K+++RL FKEPTPIQ
Sbjct: 211 NVEDMQDGIENMKQDNDDELKLGED-----EFYAWLELRLHPLLVKAMHRLGFKEPTPIQ 265
Query: 203 KACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKM-LEDKGEEAEKYAP 261
KAC PA AHQGKDVIGAAETGSGKTLAFGLPI+QRLLEEREKA ++ +EDK + E+ +
Sbjct: 266 KACFPAGAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKATRLNVEDK-KAMEESST 324
Query: 262 KGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGT 321
G LRALI+TPTRELA QV DHLK +K + + VVPIVGG+S EKQERLLK +PE+VVGT
Sbjct: 325 GGPLRALILTPTRELAKQVCDHLKEASKFLGIHVVPIVGGLSMEKQERLLKKKPEIVVGT 384
Query: 322 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE 381
PGRLWELMS G +HLVELH+LSFFVLDEADRMIE GHF+EL SII+MLP++N S++
Sbjct: 385 PGRLWELMSTGNQHLVELHSLSFFVLDEADRMIERGHFKELHSIIEMLPLSNSSDEQAVR 444
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSV-NGLNSIETLSERA 440
T +C TV +LQ KKRQT VFSAT+ALSA+FR KLK G SK S+ + L+SIE LS++A
Sbjct: 445 ATPSCETVLNLQIKKRQTFVFSATLALSANFRSKLKRGLSTSKASMADNLSSIEALSKQA 504
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
GM+ N IVDLTN +L KLEESFIEC ++DKDA LYYILSVHGQGRTI+FCTSIAALR
Sbjct: 505 GMKPNAEIVDLTNASILPEKLEESFIECSDDDKDANLYYILSVHGQGRTIIFCTSIAALR 564
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLK 527
HISSLL+ILGI+V T HAQMQQRAR+K
Sbjct: 565 HISSLLRILGINVLTNHAQMQQRARMK 591
>gi|242076434|ref|XP_002448153.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
gi|241939336|gb|EES12481.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
Length = 807
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 264/392 (67%), Positives = 312/392 (79%), Gaps = 17/392 (4%)
Query: 148 EESVAVSNGPD----------DAEEELV-NEAEISTEFDAWNELRLHPLLMKSIYRLQFK 196
+E VA N D D ++EL+ E ++S W ELRLHPLL+K++ RL FK
Sbjct: 179 DEDVASDNAEDMQDDTEKLEQDKDDELILGEDDVSE----WRELRLHPLLLKAMRRLGFK 234
Query: 197 EPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEA 256
EPTPIQK+C PAAAHQGKDVIGAAETGSGKTLAFGLPI+QRLLEEREKAA+ L +G++
Sbjct: 235 EPTPIQKSCFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAAR-LHQEGDKM 293
Query: 257 EKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPE 316
++ + LRALI+TPTRELA QV DHLK AK + + VVPIVGG+S EKQERLLK +PE
Sbjct: 294 DERSGGSPLRALILTPTRELAKQVCDHLKDAAKFLGIHVVPIVGGLSMEKQERLLKKKPE 353
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
+VVGTPGRLWE MS +HLVELH+LSFFVLDEADRMIE GHFRELQSII+MLP+TNGS+
Sbjct: 354 IVVGTPGRLWEHMSMNNQHLVELHSLSFFVLDEADRMIERGHFRELQSIIEMLPLTNGSD 413
Query: 377 KGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSV-NGLNSIET 435
+ ++ NC TV +LQ KKRQT VFSAT+ALS++FRKKLK G SK S + ++SIE
Sbjct: 414 EQSAKTMPNCETVPNLQIKKRQTFVFSATLALSSNFRKKLKRGLSTSKASTPDDVSSIEA 473
Query: 436 LSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTS 495
LS++AGM+ N IVDLT +L KLEESFIEC EEDKDAYLYYILSVHGQGRTI+FCTS
Sbjct: 474 LSKQAGMKPNAEIVDLTKASILPEKLEESFIECSEEDKDAYLYYILSVHGQGRTIIFCTS 533
Query: 496 IAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
IAALRHISS+L+ILGI+V T HAQMQQRAR+K
Sbjct: 534 IAALRHISSILRILGINVLTNHAQMQQRARMK 565
>gi|326526415|dbj|BAJ97224.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 872
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/356 (71%), Positives = 296/356 (83%), Gaps = 1/356 (0%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E AW ELRLHPLL+K+++RL F EPTPIQKACIPA AHQGKDVIGAAETGSGKTLAFGL
Sbjct: 236 ELYAWLELRLHPLLIKAMHRLGFNEPTPIQKACIPAGAHQGKDVIGAAETGSGKTLAFGL 295
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+QRLLEEREK ++ + +EAE + G LRALI+TPTRELA QV DHLK AK +
Sbjct: 296 PILQRLLEEREKTTRLHVEDEKEAEGSSTGGPLRALILTPTRELAKQVCDHLKEAAKFLG 355
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HLVELH+LSFFVLDEADR
Sbjct: 356 IHVVPIVGGLSMEKQERLLKKKPEIVVGTPGRLWELMSSGNQHLVELHSLSFFVLDEADR 415
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
MIE GHF+E+QSII+MLP++N S++ + T +C TV++LQ KKRQT VFSAT+ALSA+F
Sbjct: 416 MIERGHFKEVQSIIEMLPLSNSSDEQTVKATSSCETVANLQIKKRQTFVFSATLALSANF 475
Query: 413 RKKLKHGSLKSKQSV-NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
RKKLK G SK S L+SIE LS++AGM+ N IVDLTN +L KLEESFIEC ++
Sbjct: 476 RKKLKRGLSTSKASTAEDLSSIEELSKQAGMKPNAEIVDLTNASILPEKLEESFIECSDD 535
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKDA LYYILSVHGQGRTIVFCTSI+ALRHISSLL+ LGI+V T HAQMQQRAR+K
Sbjct: 536 DKDANLYYILSVHGQGRTIVFCTSISALRHISSLLRTLGINVLTNHAQMQQRARMK 591
>gi|115459372|ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|158513183|sp|A2XVF7.2|RH13_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|158513708|sp|A3AVH5.2|RH13_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|32488303|emb|CAE03369.1| OSJNBb0065L13.12 [Oryza sativa Japonica Group]
gi|113564857|dbj|BAF15200.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|116311068|emb|CAH67998.1| OSIGBa0157K09-H0214G12.9 [Oryza sativa Indica Group]
Length = 832
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E AW ELRLHPLL+ ++ RL FKEPTPIQKAC PAAAHQGKDVIGAAETGSGKTLAFGL
Sbjct: 196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 255
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+QRLLEE+EKA ++ + ++ + + LRALI+TPTRELA QV DHLK AK +
Sbjct: 256 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLR 315
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADR
Sbjct: 316 IQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 375
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
MIE GHF ELQSII+MLP+TNGS++ T +C TV LQ KKRQT VFSAT+ALSA+F
Sbjct: 376 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANF 435
Query: 413 RKKLKHGSLKSKQSVN-GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
RKKLK G + +K S + L+SIE LS++A M+ N IVDLT +L KLEESFIEC ++
Sbjct: 436 RKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDD 495
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKDAYLYYILSVHGQGRTI+FCTSIAALRH+SS+L++LGI+V T HAQMQQRAR+K
Sbjct: 496 DKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARMK 551
>gi|218195193|gb|EEC77620.1| hypothetical protein OsI_16604 [Oryza sativa Indica Group]
Length = 776
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E AW ELRLHPLL+ ++ RL FKEPTPIQKAC PAAAHQGKDVIGAAETGSGKTLAFGL
Sbjct: 140 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 199
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+QRLLEE+EKA ++ + ++ + + LRALI+TPTRELA QV DHLK AK +
Sbjct: 200 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLR 259
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADR
Sbjct: 260 IQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 319
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
MIE GHF ELQSII+MLP+TNGS++ T +C TV LQ KKRQT VFSAT+ALSA+F
Sbjct: 320 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANF 379
Query: 413 RKKLKHGSLKSKQSVN-GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
RKKLK G + +K S + L+SIE LS++A M+ N IVDLT +L KLEESFIEC ++
Sbjct: 380 RKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDD 439
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKDAYLYYILSVHGQGRTI+FCTSIAALRH+SS+L++LGI+V T HAQMQQRAR+K
Sbjct: 440 DKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARMK 495
>gi|222629189|gb|EEE61321.1| hypothetical protein OsJ_15428 [Oryza sativa Japonica Group]
Length = 776
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/356 (69%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E AW ELRLHPLL+ ++ RL FKEPTPIQKAC PAAAHQGKDVIGAAETGSGKTLAFGL
Sbjct: 140 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 199
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+QRLLEE+EKA ++ + ++ + + LRALI+TPTRELA QV DHLK AK +
Sbjct: 200 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLR 259
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++VVPIVGG+S EKQERLLK +PE+VVGTPGRLWELMS G +HL++LH+LSFFVLDEADR
Sbjct: 260 IQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 319
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
MIE GHF ELQSII+MLP+TNGS++ T +C TV LQ KKRQT VFSAT+ALSA+F
Sbjct: 320 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANF 379
Query: 413 RKKLKHGSLKSKQSVN-GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
RKKLK G + +K S + L+SIE LS++A M+ N IVDLT +L KLEESFIEC ++
Sbjct: 380 RKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDD 439
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKDAYLYYILSVHGQGRTI+FCTSIAALRH+SS+L++LGI+V T HAQMQQRAR+K
Sbjct: 440 DKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARMK 495
>gi|168023770|ref|XP_001764410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684274|gb|EDQ70677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/392 (56%), Positives = 286/392 (72%), Gaps = 16/392 (4%)
Query: 137 KKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFK 196
+K++ +I+ +E + ++ DD EE + AW +LRL+PLLM+++ +L+F
Sbjct: 79 RKREDMEIERLENTPSIEA--DDIEE---------IDMSAWAQLRLNPLLMRALMKLKFS 127
Query: 197 EPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEA 256
+PT IQ+ CI AAA+QGKDVIGAAETGSGKTLAFGLPI+QRLL++ EK + + ++A
Sbjct: 128 KPTHIQEKCIAAAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDDHEKIQR--KSGFDKA 185
Query: 257 EKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPE 316
K G LRALI+TPTRELALQV DHL+ A+ N VVPIVGGM+ +KQ+RLL+ +P+
Sbjct: 186 SKKQSGGPLRALIVTPTRELALQVCDHLRAAAQFTNFNVVPIVGGMALQKQQRLLRYQPQ 245
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
+VVGTPGRLWELMS GE HL++L LSFFVLDEADRM+E GHF+ELQSI+DMLP T +
Sbjct: 246 IVVGTPGRLWELMSAGEAHLLDLAQLSFFVLDEADRMVERGHFKELQSIMDMLPKTGPED 305
Query: 377 KGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ-SVNGLNSIET 435
E + + + KKRQTLVFSAT++L F+KKLK G K S S+ +
Sbjct: 306 TTMKEDFTETIVIEPV--KKRQTLVFSATLSLPPGFKKKLKRGFFNDKSTSKKNEYSVAS 363
Query: 436 LSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTS 495
L +RA MR N I+DLT VLA KLEES I+C++E+KDAYLYYIL VHG GRT+VFCTS
Sbjct: 364 LIQRAAMRDNAVIIDLTTKDVLARKLEESVIQCRDEEKDAYLYYILKVHGCGRTLVFCTS 423
Query: 496 IAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
IAALRH++++L++L + VW LHAQMQQ+ RLK
Sbjct: 424 IAALRHVTAILRLLQVSVWPLHAQMQQKQRLK 455
>gi|302781030|ref|XP_002972289.1| hypothetical protein SELMODRAFT_97519 [Selaginella moellendorffii]
gi|300159756|gb|EFJ26375.1| hypothetical protein SELMODRAFT_97519 [Selaginella moellendorffii]
Length = 524
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/351 (60%), Positives = 266/351 (75%), Gaps = 14/351 (3%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
WNELRLHP L+ ++ L F PTPIQKACIPAAAH+GKDVIGAAETGSGKTLAFG+PI+Q
Sbjct: 1 WNELRLHPSLLTALSTLGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPILQ 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL+ER+K + A LRALI+TPTRELALQ+ DH++ VAK +++V
Sbjct: 61 RLLDERDKLLRQ--------NNVASDSPLRALIVTPTRELALQICDHIRAVAKFTDIKVA 112
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PIVGG+ST+KQERLLK RP +VVGTPGRLWELMS GE HLV+L +SFF+LDEADRMIE
Sbjct: 113 PIVGGISTQKQERLLKRRPAIVVGTPGRLWELMSSGESHLVQLQEISFFILDEADRMIEK 172
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
GHF+EL+SIID+LP +G + + N V +S+ +K+RQTLVFSAT+ L DF+KKL
Sbjct: 173 GHFQELESIIDLLP-KHGEPREDLDPADN-VFLSA--KKRRQTLVFSATLTLPPDFKKKL 228
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K K+S +S+ LSERAG+ +VDLT+ V+A KL ES IEC +E+KDAY
Sbjct: 229 KKSYGARKKSEQ--HSLSLLSERAGLSDTAEVVDLTSKNVVAEKLTESVIECTDEEKDAY 286
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
LYY+L VHG GRTIVFCTSIAALR ++++L++L + W LHAQ+QQR RLK
Sbjct: 287 LYYVLKVHGCGRTIVFCTSIAALRRLAAILRLLEVPAWPLHAQLQQRQRLK 337
>gi|302804899|ref|XP_002984201.1| hypothetical protein SELMODRAFT_119748 [Selaginella moellendorffii]
gi|300148050|gb|EFJ14711.1| hypothetical protein SELMODRAFT_119748 [Selaginella moellendorffii]
Length = 521
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/352 (61%), Positives = 268/352 (76%), Gaps = 15/352 (4%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
WNELRLHP L++++ L F PTPIQKACIPAAAH+GKDVIGAAETGSGKTLAFG+PI+Q
Sbjct: 1 WNELRLHPSLLRALSILGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPILQ 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV-TDHLKGVAKGINVRV 295
RLL+ER+K + A LRALI+TPTRELALQV DH++ VAK +++V
Sbjct: 61 RLLDERDKLLRQ--------NNVASDSPLRALIVTPTRELALQVICDHIRAVAKFTDIKV 112
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
PIVGG+ST+KQERLLK RP +VVGTPGRLWELMS GE HLV+L +SFF+LDEADRMIE
Sbjct: 113 APIVGGISTQKQERLLKRRPAIVVGTPGRLWELMSSGESHLVQLQEISFFILDEADRMIE 172
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF+EL+SIID+LP +G ++ + N V +S+ +K+RQTLVFSAT+ L DF+KK
Sbjct: 173 KGHFQELESIIDLLP-KHGESREDLDPADN-VFLSA--KKRRQTLVFSATLTLPPDFKKK 228
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
LK K+S +S+ LSERAG+ +VDLT+ V+A KL ES IEC +E+KDA
Sbjct: 229 LKKSYGARKKSEQ--HSLSLLSERAGLSDTAEVVDLTSKNVVAEKLTESVIECTDEEKDA 286
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YLYY+L VHG GRTIVFCTSIAALR ++++L++L + W LHAQ+QQR RLK
Sbjct: 287 YLYYVLKVHGCGRTIVFCTSIAALRRLAAILRLLEVPAWPLHAQLQQRQRLK 338
>gi|3776003|emb|CAA09204.1| RNA helicase [Arabidopsis thaliana]
Length = 451
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/213 (72%), Positives = 186/213 (87%), Gaps = 1/213 (0%)
Query: 316 EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
E+VV TPGRLWELMS GEKHLVELH+LSFFVLDEADRM+E GHFRELQSI+D+LP+T+
Sbjct: 1 EIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKP 60
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-LNSIE 434
N+G+++ ++ TV ++ +KKRQT VFSATIALS+DFRKKLK GS KSKQS +G +NSIE
Sbjct: 61 NEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIE 120
Query: 435 TLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCT 494
LSERAGMR NVAI+DLT +LA K+EESFI+C+E++KDAYLYYILSVHGQGRTIVFCT
Sbjct: 121 VLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCT 180
Query: 495 SIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
S+ LRHIS LLKILG+DV TL ++M+QRARLK
Sbjct: 181 SVTDLRHISGLLKILGLDVCTLFSEMKQRARLK 213
>gi|412987724|emb|CCO20559.1| predicted protein [Bathycoccus prasinos]
Length = 951
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 209/628 (33%), Positives = 303/628 (48%), Gaps = 143/628 (22%)
Query: 27 GGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKP 86
G E D + N+++ A D + FLVGS+E GF+SLE L + K E K
Sbjct: 64 GAVEEGDDEVTENNNWHAIDVNS-QFLVGSSE--EGFVSLEV-------LSLEK-EGEKD 112
Query: 87 GKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKK---------- 136
K + +K +S N D D+DGS ++E++ +E G+KK+
Sbjct: 113 DAKTKTTVKKSASKN---------DIDDDGSITVRKEKEKENDENGEKKEATKSKASNAK 163
Query: 137 -----KKKKGKKIKTVEESVAVSNGPDDA---------------EEELVNEAEISTEFDA 176
K+KK K K E N D+A E E + + A
Sbjct: 164 EARILKRKKRWKEKVEEAKKRKRNEKDEAKRGDGETAGGGGGDYENEDDDLLGDEEDVAA 223
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + LHPLL+K+I +L+F PTPIQ+ + A D++GAAETGSGKTLAFGLPI+Q
Sbjct: 224 WAQYDLHPLLLKAIRKLRFTSPTPIQEKVLHPAIKGRMDIVGAAETGSGKTLAFGLPILQ 283
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RL++++E+ E EE K HLRALI+TPTRELALQV L VA +++
Sbjct: 284 RLMQDKEEEKWYEEYADEEKPGKGKK-HLRALIVTPTRELALQVAKMLADVAIYTGIQIA 342
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGMS +KQER+LK +PE++V TPGRLWEL+ G+KHL L L+F LDEADRM+E
Sbjct: 343 AIVGGMSKQKQERVLKKQPEIIVATPGRLWELIRDGDKHLTSLERLTFLTLDEADRMVER 402
Query: 357 GHFRELQSIIDMLP-----------------------MTNGSNKGQSEQ----------- 382
GHF+EL+S+I +P T SN ++++
Sbjct: 403 GHFKELESVIKSIPEPPETRRIARSAKLTKRKQPMMAATKVSNDSKTKKGEEEEENEEKN 462
Query: 383 --TQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL--KHGSLKSKQSVNG--------- 429
+ + + RQT VFSAT+ + + + KL K SK+ NG
Sbjct: 463 DEESEPAADNRIMARDRQTFVFSATLTVPDEVKYKLDRKKPQASSKKVNNGKKKDGGGSS 522
Query: 430 -----------------------LNSIETLSERAGMRANVAIVD---------------- 450
N++ L + V + D
Sbjct: 523 GVENNNGDYENAYRLEPPKELASTNTMGNLMKMVPFYGRVKLCDVSDSVTKKKKDNNPDE 582
Query: 451 ------LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
+T+ +A+K+ ES +EC ++++DA Y+LS H +IVF +I++LR +++
Sbjct: 583 SSSKAMITSTTKVASKVHESALECTDDERDALTLYLLSAHAGKPSIVFVNAISSLRRLTA 642
Query: 505 LLKILGIDVWTLHAQMQQRARLKLFSQM 532
LLK++ ++ LHA MQQRARLK +
Sbjct: 643 LLKLMKVNAVGLHAGMQQRARLKALDRF 670
>gi|346471193|gb|AEO35441.1| hypothetical protein [Amblyomma maculatum]
Length = 684
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/374 (41%), Positives = 222/374 (59%), Gaps = 29/374 (7%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+G DD+ + V + + AW + +++++ L+F EPT IQ +PAA
Sbjct: 97 DGTDDSSPD-VPKVSRCDDMSAWLNCYVPEQVLRALAELKFTEPTEIQAQTLPAAIRDHM 155
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D++GAAETGSGKTLAFG+P++ ++E + L E A + P L+AL++TPTR
Sbjct: 156 DIMGAAETGSGKTLAFGIPLLHHIMERK------LRQPEECASQAMP---LQALVLTPTR 206
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA+QVT HL+ VAK NVR+V ++GG+S EKQ RLLK +PE+VV TPGRLWEL+ G
Sbjct: 207 ELAIQVTRHLQDVAKYTNVRIVNVIGGLSAEKQLRLLKRKPEIVVATPGRLWELVDQGAP 266
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
H+ ++ + + V+DEADRM+E GHF +L ++++ M S +G ++
Sbjct: 267 HVSDVSKVRYLVIDEADRMVEKGHFEDLTRLLEV--MNAPSEEGA-------------EK 311
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
++RQ VFSAT+ + D K++K+ K K + +E L G+ + +VDLT
Sbjct: 312 RRRQNFVFSATLTMVHDMPKRMKNKHKKHK--LTEKEKVEELMCTIGISSKPKVVDLTRK 369
Query: 455 CVLANKLEESFIECKE-EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
A L ES I C EDKD+ LYY L H GRT+VFC SI ++R + S+L +L
Sbjct: 370 LGTAETLCESRIVCPSVEDKDSRLYYFLLAHP-GRTLVFCNSIDSVRRLVSVLDLLQRCP 428
Query: 514 WTLHAQMQQRARLK 527
LHA MQQR RLK
Sbjct: 429 LPLHASMQQRQRLK 442
>gi|66812546|ref|XP_640452.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
gi|74997024|sp|Q54TD7.1|DDX24_DICDI RecName: Full=ATP-dependent RNA helicase ddx24; AltName: Full=DEAD
box protein 24
gi|60468476|gb|EAL66480.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
Length = 940
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/416 (37%), Positives = 223/416 (53%), Gaps = 72/416 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
WN L PL++K + L F +PT IQ + IP A G DVIGAA+TGSGKTLAFG+P++Q
Sbjct: 296 WNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIPMVQ 355
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH---------------------LRALIITPTRE 275
R+L+ K + +E+K + + + L +L+I PTRE
Sbjct: 356 RILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEEGRSKEYRKLFSLVICPTRE 415
Query: 276 LALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
LA+QVT+H+K + N++V+ IVGGM++++Q+R+L RPE+VV TPGRLWEL++ G +H
Sbjct: 416 LAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKRPEIVVATPGRLWELITEGHQH 475
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS-------NKGQSEQTQNC-V 387
LVEL +L +DEADRM+E GHF EL+SI+ LP+ + K ++E+ +N
Sbjct: 476 LVELESLLCLGIDEADRMVEQGHFAELESILKTLPIHRTAMSKKERLKKKETEEKRNKRR 535
Query: 388 TVSSLQRK-----------------------------------KRQTLVFSATIA-LSAD 411
V L K KRQT VFSAT+ + D
Sbjct: 536 KVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNHLTTTHKRQTFVFSATLVNIPGD 595
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
K+ L IE L E+ + + ++D+T + A L E+ I C E
Sbjct: 596 ------GAPTSQKKKYRKLTPIENLIEKVRFQRDYKLIDVTQKRLTAKNLLETKIFCNLE 649
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLYY + + GRT+VF SI R + + IL + V+ LHAQMQQ+ RLK
Sbjct: 650 EKDMYLYYFVERYP-GRTLVFVNSIDCARRLIPIFNILEVPVFALHAQMQQKQRLK 704
>gi|308810583|ref|XP_003082600.1| RNA Helicase (ISS) [Ostreococcus tauri]
gi|116061069|emb|CAL56457.1| RNA Helicase (ISS) [Ostreococcus tauri]
Length = 1211
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 217/398 (54%), Gaps = 45/398 (11%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+ AW E LHPL++++I F PTPIQ+ C+ A D+IGAA+TGSGKTLAF
Sbjct: 266 CDISAWFEFDLHPLILRAIQDCGFTSPTPIQRECLHPATKGRYDIIGAAQTGSGKTLAFA 325
Query: 232 LPIMQRLLEEREKAAKMLED----KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV 287
LPI+ RLL E + ED G+E E LRALI+ PTRELALQV ++ V
Sbjct: 326 LPILHRLLSE---GIGLPEDYPLKDGKEREVL--PDVLRALIVCPTRELALQVCAMMRAV 380
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A + V P+V + L P ++V TPGRLW+ M G + E LSFFVL
Sbjct: 381 AVYTKIDVCPVVRWYVEREARATLNRMPAIIVATPGRLWDTMQSGHAAVTEFGALSFFVL 440
Query: 348 DEADRMIENGHFRELQSIIDMLP------MTNGS------------NKGQSEQTQNCVTV 389
DEADRMI+ GHF+EL SII +P G+ N + E N
Sbjct: 441 DEADRMIQRGHFKELTSIIQNIPEPPRVKRAGGAAKSKEESDAPVDNFAEDEDDVNRAKA 500
Query: 390 SSLQRKK---RQTLVFSATIALSADFRKKLKHGSLK--------SKQSVNGLNSIETLSE 438
+L+ K+ RQT VFSAT+ + R+KLK G S Q +G S+E+L E
Sbjct: 501 LALRPKQMLDRQTFVFSATLTVPDSVRRKLKKGKAPTSAKPRKGSAQPQSG--SLESLME 558
Query: 439 RAGMRANVAIVDLTNM----CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCT 494
V +VDLT + +A+ + ES +EC E+D+D+ LYY+LS H G TIVF
Sbjct: 559 AVPFYGRVKMVDLTPIERKGGAVASSIAESALECTEDDRDSMLYYLLSAH-PGMTIVFVN 617
Query: 495 SIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+I+ LR + +LLKIL + V LHA MQQRARLK +
Sbjct: 618 AISCLRRVVALLKILRVPVEGLHAGMQQRARLKALDRF 655
>gi|427788943|gb|JAA59923.1| Putative gamete proteinration [Rhipicephalus pulchellus]
Length = 691
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 213/358 (59%), Gaps = 28/358 (7%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S + AW + +++++ L F EPT IQ +PAA D++GAAETGSGKTLAF
Sbjct: 116 SPDMSAWLNCHVPEPVLRALAELNFTEPTEIQAQTLPAAIRDHLDIMGAAETGSGKTLAF 175
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
G+P++ ++E + + + E K P L+AL++TPTRELA+QVT H++ VAK
Sbjct: 176 GIPLLHHIMERKSRLS------AEGDTKAMP---LQALVLTPTRELAIQVTRHIQDVAKY 226
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
NVR+V +VGG+S EKQ RLLK +PE+VV TPGRLWEL+ G H+ ++ + + V+DEA
Sbjct: 227 TNVRIVNVVGGLSAEKQLRLLKRKPEIVVATPGRLWELVDQGAPHVSDVSKVRYLVIDEA 286
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DRM+E GHF +L ++D+ M S G+ ++++RQ VFSAT+ +
Sbjct: 287 DRMVEKGHFEDLTRLLDI--MNAPSEDGE-------------EKRRRQNFVFSATLTMVH 331
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
D ++LK+ K K S +E L G+ + +VDLT A L ES I C
Sbjct: 332 DLPRRLKNKPKKRKLSEK--EKVEELMHTIGISSKPKVVDLTRKLGTAELLCESRIVCPS 389
Query: 471 E-DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKD+ LYY L H GRT+VFC SI ++R + S+L +L LHA MQQR RLK
Sbjct: 390 VGDKDSRLYYFLLSHP-GRTLVFCNSIDSVRRLVSVLDLLQRSPLPLHASMQQRQRLK 446
>gi|145353253|ref|XP_001420934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581170|gb|ABO99227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 200/373 (53%), Gaps = 68/373 (18%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+ AW E LHPL+M++I F PTPIQ+ C+ A D+IGAA+TGSGKTLAF
Sbjct: 14 CDVSAWFEFDLHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCDIIGAAQTGSGKTLAFA 73
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
LPI+QRLL + G + LRALI+ PTRELALQV ++ VA
Sbjct: 74 LPILQRLLSQ-----------GIDV--------LRALIVAPTRELALQVCAMMRAVAVYT 114
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+ V P+VGGMS EKQERLL +P V+V TPGR+W+ M G +HL EL LSFFVLDEAD
Sbjct: 115 KIDVCPVVGGMSKEKQERLLNRKPAVIVATPGRMWDTMQSGHEHLTELSALSFFVLDEAD 174
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
RM+E GHF EL SII +P R KR +A + +
Sbjct: 175 RMVERGHFSELTSIIQNIPQP--------------------PRIKRPG--GAAKLTSAVP 212
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F ++K L +K+ G +A + ES +EC E+
Sbjct: 213 FYGRVKMVDLTTKERKGG--------------------------AVAKSIAESALECTED 246
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQ 531
D+D+ LYY+LS H G TIVF +I+ LR + +LLKIL + V LHA MQQRARLK +
Sbjct: 247 DRDSLLYYLLSAH-PGMTIVFVNAISCLRRVVALLKILRVPVEGLHAGMQQRARLKALDR 305
Query: 532 MITWIRKRPKGDR 544
KGDR
Sbjct: 306 FKAAAAAADKGDR 318
>gi|384498821|gb|EIE89312.1| hypothetical protein RO3G_14023 [Rhizopus delemar RA 99-880]
Length = 808
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 220/372 (59%), Gaps = 25/372 (6%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
P+ + +++ + S + AW + L ++ ++ +F PTPIQ+ +P A QG+D+
Sbjct: 233 PEPKKRPTIDDVDQSVDVSAWKDFELAQPIVNALKYHKFSSPTPIQEKTLPLAL-QGRDI 291
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
+G+AETGSGKTLAFG+PI+Q L A ED L LI+TPTREL
Sbjct: 292 VGSAETGSGKTLAFGIPIVQYL------ATHEKED-------------LSGLILTPTREL 332
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A+QV DH+ VA ++R V IVGGMS +KQERLLK +P+++V TPGRLWEL SG ++++
Sbjct: 333 AIQVKDHIANVALFTDIRCVAIVGGMSAQKQERLLKGKPDIIVATPGRLWELFSGNQEYM 392
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQT-QNCVTVSSLQRK 395
L + F VLDEADRM+E GHF EL +I++ L + E+ Q +
Sbjct: 393 DMLKRIKFLVLDEADRMLEKGHFEELTNILNTLSTKRQTTTDWPEEIGQGNRKILPQDLG 452
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
QT +++AT LS D R +K K+ G + LS A++D+T+
Sbjct: 453 VHQTFIYTAT--LSKDIRFNVKAKKRKATAQPTGTMD-DLLSRIEFADQEPALIDMTSEN 509
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
++A++L E+ I+C + +KD Y+YY ++ + GRTI+F SI A+R + + K+L ++V
Sbjct: 510 IVASRLLEAKIDCLQNEKDVYVYYFVTRY-PGRTIIFVNSIDAIRRLVPVFKLLNVEVLG 568
Query: 516 LHAQMQQRARLK 527
LHAQMQQ+ RLK
Sbjct: 569 LHAQMQQKQRLK 580
>gi|340374409|ref|XP_003385730.1| PREDICTED: hypothetical protein LOC100639442 [Amphimedon
queenslandica]
Length = 1012
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 220/396 (55%), Gaps = 65/396 (16%)
Query: 133 KKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIY- 191
+ KK+KK + ++EE AV G +AW+ L LH +++S+
Sbjct: 539 QHKKRKKVVQSTVSIEEPKAVKGG------------------EAWSSLGLHDTIVRSLVD 580
Query: 192 RLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
RL F PT IQ+ IP A + D+IGAAETGSGKTLAFGLP++ +L R++
Sbjct: 581 RLGFSTPTEIQQKAIPPAINGKHDIIGAAETGSGKTLAFGLPVLNYILTNRQR------- 633
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL 311
L ALI+ PTRELALQV +H+K A N++V +VGGMS+EKQ+RLL
Sbjct: 634 -------------LVALILMPTRELALQVVEHIKAAAYYTNIKVCAVVGGMSSEKQDRLL 680
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
K PE+VVGTPGRLW++M HL L F ++DEADRMIE GHFREL I++ L
Sbjct: 681 KLCPEIVVGTPGRLWQMMKEECPHLNNFSQLRFLIIDEADRMIEQGHFRELTLILERLS- 739
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN 431
S + K QT+VFSAT+ L R+K+ K K ++G
Sbjct: 740 ------------------SQVLSDKYQTMVFSATLTLP---RRKIGR---KRKSKMSGEE 775
Query: 432 SIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
SIE + +AG+ +DLT+ ++EES I C ++KD YLYY L ++ GR +V
Sbjct: 776 SIENVILKAGLSETAVTIDLTHKHGTVERIEESKIICTTDEKDMYLYYALLMY-TGRVLV 834
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
F S+ L + SLL++L LHA+MQQR R+K
Sbjct: 835 FTNSLDCLNRLKSLLELLKFSPLPLHARMQQRQRIK 870
>gi|198437354|ref|XP_002125842.1| PREDICTED: similar to CG9143 CG9143-PA [Ciona intestinalis]
Length = 719
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 217/378 (57%), Gaps = 44/378 (11%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
+ + AW L + ++K++ L+F +P PIQ+ CIP A +D++GAAETGSGKTLAF
Sbjct: 159 TVDMSAWQNLYVPETVLKALAELRFTKPMPIQEQCIPVAIRDKRDILGAAETGSGKTLAF 218
Query: 231 GLPIMQRLLEEREKA-------AKMLED-------------KGEEAEKYAPKGHLRALII 270
G+P++ L+E+RE+ A++ ED EE E+ P L AL++
Sbjct: 219 GIPLLHHLMEDRERNLLENTENAEIDEDDEHMSDFEDAEPVSKEEIEETQPTKALPALVL 278
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
TPTRELA+QV HL VAK + +VGGM+ +KQ RLL P++V+ TPGRLWEL+
Sbjct: 279 TPTRELAIQVKKHLTQVAKHTKLWSTVVVGGMAQQKQIRLLNKEPDIVIATPGRLWELLE 338
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
G +L +H L + V+DEADRM+E+GHF EL +++++ +
Sbjct: 339 SGHPYLSTIHKLRYLVIDEADRMLEHGHFEELNKLLEVINLKKS---------------- 382
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS-IETLSERAGMRANVAIV 449
+ KRQT +FSAT+ + F + ++ S N ++ + L ++ G+R +
Sbjct: 383 ---KTKRQTFIFSATLT-TVHFTP--NRPNFPTQASSNTKDTKLSKLMKKIGVRNKPFVA 436
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
DLT + A KL E+ I C+ ++KD YLYY + H GRT++F SI + H+S +L L
Sbjct: 437 DLTTKKLTAEKLSEAKIICQPKEKDFYLYYFIKSHP-GRTLIFTNSIDCIFHLSGVLDAL 495
Query: 510 GIDVWTLHAQMQQRARLK 527
G + +HA+MQQR RLK
Sbjct: 496 GCNPLHIHAKMQQRQRLK 513
>gi|156404211|ref|XP_001640301.1| predicted protein [Nematostella vectensis]
gi|156227434|gb|EDO48238.1| predicted protein [Nematostella vectensis]
Length = 566
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 222/356 (62%), Gaps = 15/356 (4%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L + P +++++ F +PTPIQ IP A +D+IGAAETGSGKTLAFG+PI+Q
Sbjct: 4 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 63
Query: 237 RL-LEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVR 294
+ ++ KA + DK + E +G+ L ALI+ PTRELALQV DHL AK +V+
Sbjct: 64 HIEAYKKRKAEQSPSDKESDLES---QGYPLLALIMAPTRELALQVKDHLVKAAKYTSVK 120
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V IVGGM+ KQ+RLLK RPE+VV TPGRLWEL+S E+H+ + L + V+DEADRM+
Sbjct: 121 VAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQQEEHVSNIQLLRYLVIDEADRMV 180
Query: 355 ENGHFRELQSIIDMLPMTNGSNK--GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
E GH+ EL SI++++ + N Q + + + + ++ + Q +FSAT+ L F
Sbjct: 181 EQGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSKTPEKARLQKFIFSATLTLPKSF 240
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGM-RANVAIVDLTNMCVLANKLEESFIECKEE 471
+K+ + +++V+ + +L ++ + R ++D+T+ L E+ I C +E
Sbjct: 241 KKRGR------EKTVSKGELLASLMDKIHLERKRSKVIDVTSSRGTVETLTEAKITCTKE 294
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKD YLYY L + GRT+VF +I +R ++S+L+++ ++ LHA MQQR RLK
Sbjct: 295 DKDVYLYYFL-LKYPGRTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLK 349
>gi|189239044|ref|XP_969373.2| PREDICTED: similar to CG9143 CG9143-PA [Tribolium castaneum]
Length = 645
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 218/392 (55%), Gaps = 34/392 (8%)
Query: 136 KKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQF 195
K KK +K+ +V + + + E+ + + S + W+ L ++K++ F
Sbjct: 62 KPAKKKRKVSSVALTPSKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGF 121
Query: 196 KEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEE 255
EPT IQ +PAA +D++GAAETGSGKTLAFGLPI+ +L E+ K G
Sbjct: 122 NEPTLIQSLSLPAAVLGRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVV------GNS 175
Query: 256 AEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARP 315
+K L AL++TPTRELA+QV DHLK + K ++ + ++GGM+ KQER+L RP
Sbjct: 176 DKK------LYALVLTPTRELAVQVRDHLKAIVKFTDINIAVVLGGMAAVKQERILSKRP 229
Query: 316 EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
E+VV TPGRLWEL+ G +HL +++ + + +DE DRM+E GHF EL +I++ L
Sbjct: 230 EIVVATPGRLWELIQQGNEHLSQINDIRYLAIDETDRMLEKGHFEELHNILERL------ 283
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIET 435
+ + K+RQ VFSAT+ L D K + S SK + +
Sbjct: 284 ------------NLDKTRAKQRQNFVFSATLTLVHDLPKYRFNKSKVSKMTPQ--QKLSR 329
Query: 436 LSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTS 495
+ G++ N IVD++ L ES I C E+KD Y+YY L H GRT++FC S
Sbjct: 330 IMTDLGIK-NPKIVDISQGGNTPATLTESRISCGIEEKDYYVYYFLQKH-PGRTLIFCNS 387
Query: 496 IAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
I +R +++LL ILG LHA MQQR RLK
Sbjct: 388 IGCVRRLANLLGILGCRPLPLHASMQQRQRLK 419
>gi|270010898|gb|EFA07346.1| hypothetical protein TcasGA2_TC015943 [Tribolium castaneum]
Length = 599
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/392 (38%), Positives = 218/392 (55%), Gaps = 34/392 (8%)
Query: 136 KKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQF 195
K KK +K+ +V + + + E+ + + S + W+ L ++K++ F
Sbjct: 60 KPAKKKRKVSSVALTPSKQGSSVETRVEINEKIQKSDSYLVWSNFGLPDSIIKALVLQGF 119
Query: 196 KEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEE 255
EPT IQ +PAA +D++GAAETGSGKTLAFGLPI+ +L E+ K G
Sbjct: 120 NEPTLIQSLSLPAAVLGRRDIVGAAETGSGKTLAFGLPIVAGILNEKSKVV------GNS 173
Query: 256 AEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARP 315
+K L AL++TPTRELA+QV DHLK + K ++ + ++GGM+ KQER+L RP
Sbjct: 174 DKK------LYALVLTPTRELAVQVRDHLKAIVKFTDINIAVVLGGMAAVKQERILSKRP 227
Query: 316 EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
E+VV TPGRLWEL+ G +HL +++ + + +DE DRM+E GHF EL +I++ L
Sbjct: 228 EIVVATPGRLWELIQQGNEHLSQINDIRYLAIDETDRMLEKGHFEELHNILERL------ 281
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIET 435
+ + K+RQ VFSAT+ L D K + S SK + +
Sbjct: 282 ------------NLDKTRAKQRQNFVFSATLTLVHDLPKYRFNKSKVSKMTPQ--QKLSR 327
Query: 436 LSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTS 495
+ G++ N IVD++ L ES I C E+KD Y+YY L H GRT++FC S
Sbjct: 328 IMTDLGIK-NPKIVDISQGGNTPATLTESRISCGIEEKDYYVYYFLQKH-PGRTLIFCNS 385
Query: 496 IAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
I +R +++LL ILG LHA MQQR RLK
Sbjct: 386 IGCVRRLANLLGILGCRPLPLHASMQQRQRLK 417
>gi|281207739|gb|EFA81919.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 932
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/415 (37%), Positives = 221/415 (53%), Gaps = 63/415 (15%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+ AWN+ L PLL+K + L + EPT IQ IPAA G D+IGAAETGSGKTLAFG
Sbjct: 309 VDISAWNQYDLDPLLVKGLKALGYGEPTEIQSQVIPAALKNGLDIIGAAETGSGKTLAFG 368
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAE-KYAP----------------------KGHLRAL 268
+P++ +L +E + + K P +GHL +L
Sbjct: 369 IPMLHNILTYLRSINHPVEKQNINVDGKMKPLVEQDDEEEEEEEEEEETATRKQGHLYSL 428
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
I+ PTRELA+QV +HLK ++ + VV +VGGM+ +KQ RLL RPE+VV TPGRLWEL
Sbjct: 429 IMCPTRELAIQVANHLKSISYFTTISVVTVVGGMAAQKQIRLLGRRPEIVVATPGRLWEL 488
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG-------------- 374
+ G +HL++L L F +DEADRM+E GHF E+ SI+ MLP +
Sbjct: 489 IQDGNEHLLDLTHLMCFGIDEADRMVEKGHFAEVDSILKMLPKYSSKLQQQREQQAAEEE 548
Query: 375 ---------------SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-------LSADF 412
+ + E+ + S L KRQT +FSAT+ L+ D
Sbjct: 549 EDKEEQEEEEDKEDGEVEDEEEKEERSNGFSYLSSFKRQTFIFSATLVGIPNINELNNDG 608
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+K + G+ K K+ + ++ L + + ++D T + A LEE+ I C E+
Sbjct: 609 KKPMG-GNRKFKKK--AASPLQELIGKVQFQRRYRLIDCTKSKLTARNLEETKIVCSVEE 665
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+D +LYY + + GRT+VF SI + R + +L L + ++TLHAQMQQR RLK
Sbjct: 666 RDMFLYYFVDRY-PGRTLVFVNSIDSARRLLPILNNLKVPIFTLHAQMQQRQRLK 719
>gi|348531313|ref|XP_003453154.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Oreochromis niloticus]
Length = 847
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 218/406 (53%), Gaps = 72/406 (17%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
+ + AW +L + P +++++ L F PTPIQ C+P A D++GAAETGSGKTLAF
Sbjct: 238 NVDMSAWKDLFVPPPVLRALSSLGFGSPTPIQALCLPPAIRDRMDILGAAETGSGKTLAF 297
Query: 231 GLPIMQRLLE----EREKAAKMLEDKGEEAEKY--------------------------- 259
G+PI+ +LE E K+A+ +++G EA K
Sbjct: 298 GIPIIHTILEWKHNEYTKSAEEDQEEGVEASKENDEDAEDQNQGDSDEDEHSDVEDEQLG 357
Query: 260 --------------APKGH----LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGG 301
P G L L++TPTRELA+QV H+ VAK +++ +VGG
Sbjct: 358 CVRVIKNADFDFDEKPAGAQSRPLLGLVLTPTRELAVQVKHHIDAVAKFTDIKTALVVGG 417
Query: 302 MSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 361
M+ +KQ R+LK RPE+++ TPGRLW+L+ HLV L L V+DEADRM+E GHF E
Sbjct: 418 MAQQKQRRVLKRRPEIIIATPGRLWDLIKERHPHLVNLRQLRCLVIDEADRMVERGHFAE 477
Query: 362 LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 421
L+++++ML T+ + RQT VFSAT+ + +L
Sbjct: 478 LENLLEMLNTTHFN-------------------PTRQTFVFSATLTMVHSLPTRLLQ--- 515
Query: 422 KSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL 481
K K++++ N +E L E+ G+++ +VDLT L E+ I C++++KD YLYY L
Sbjct: 516 KKKKNLDQRNKLEILMEKVGIKSKPKVVDLTRKEATVETLIETQIHCQKDEKDFYLYYFL 575
Query: 482 SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ GRT+VF SI ++ ++SLL IL LHA M Q+ RLK
Sbjct: 576 -LQYPGRTMVFANSIDCIKRLNSLLVILDCTPLPLHANMHQKQRLK 620
>gi|410898437|ref|XP_003962704.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Takifugu
rubripes]
Length = 739
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 216/396 (54%), Gaps = 65/396 (16%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
T+ AW +L + ++K++ L F PTPIQ +P+A KD++GAAETGSGKTLAFG
Sbjct: 154 TDVSAWKDLFVPAPVLKALSSLGFGSPTPIQALTLPSAIRDHKDILGAAETGSGKTLAFG 213
Query: 232 LPIMQRLLEEREKAAKMLEDKGEE--------------AEKYAPKGH------------- 264
+P++ +LE ++ +A+++ED E +E Y+ +
Sbjct: 214 IPMIHTILEWKKNSAELVEDNIEATIPMKSLYLPEPTASENYSVEEEVIKDAETESEDMT 273
Query: 265 -------------LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL 311
L L++TPTRELA+QV H+ V+K +++ +VGG+S EKQ R+L
Sbjct: 274 KEEENAAGSFSQPLLGLVLTPTRELAVQVKHHIDAVSKFTDIKTAIVVGGLSQEKQRRML 333
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
K RPE+++ TPGRLW+L+ HL L + V+DEADRM+E GHF EL+++++ML
Sbjct: 334 KLRPEIIIATPGRLWDLIKEKHPHLQNLRQVRCLVIDEADRMVERGHFAELENLLEMLKT 393
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN 431
+ + RQ VFSAT+ +L K+S++ +
Sbjct: 394 AHFN-------------------PLRQMFVFSATLTTKHSLPTRLLQ-----KRSLDQRS 429
Query: 432 SIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
+E L ++ G++A IVDLT L E+ I+C++E+KD YLYY L + GRT+V
Sbjct: 430 RLEILIDKVGIKAKPKIVDLTRKEATVETLTETCIQCQKEEKDFYLYYFL-LRYPGRTMV 488
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
F SI ++ ++SLL IL D LHA M Q+ RLK
Sbjct: 489 FANSIDCIKRLNSLLVILDCDTLPLHANMHQKQRLK 524
>gi|198458698|ref|XP_002138576.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
gi|198136429|gb|EDY69134.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
Length = 807
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 216/401 (53%), Gaps = 64/401 (15%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E E AWN L + +++++ FK PT IQ +PAA H KD++GAAETGSGKTL
Sbjct: 202 EYKDELSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIHGKKDILGAAETGSGKTL 261
Query: 229 AFGLPIMQRLLEERE--------KAAKML-----------------------------ED 251
AFG+P++ ++E ++ KA K+ ED
Sbjct: 262 AFGIPMLAGIMELKQRNASSGIRKAPKVKGAPIAPPADDEHELTPPPDELDHVSGASDED 321
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL 311
E + + L L++TPTRELA+QV +HL AK ++V I GG+S KQER+L
Sbjct: 322 SDAEEREQRKQTPLYGLVLTPTRELAVQVRNHLVSAAKYTGIKVAAIFGGLSVAKQERVL 381
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
+ PE+VV TPGRLWEL + G +HL +L LSF V+DE DRM+E GHF EL+S++ +L
Sbjct: 382 RQCPEIVVATPGRLWELFAQGNQHLNKLDDLSFLVIDETDRMVEKGHFEELRSLLKVL-- 439
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS-----KQS 426
EQ ++++RQ VFSAT+ L D ++ ++ KQ+
Sbjct: 440 ------NADEQ----------KKQQRQNFVFSATLTLVHDLPDHMQKRNVGKRPKFVKQT 483
Query: 427 VNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ 486
V+ IE+L E G+ + IVD+T+ A L ES + C + KD YLYY + H
Sbjct: 484 VD--QKIESLIEELGI-SQPKIVDITSTQQTAQTLTESRLLCPIDQKDFYLYYFIQRH-P 539
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
GRTIVFC SI +R +++L +L LHA M Q+ RLK
Sbjct: 540 GRTIVFCNSIDCVRRLATLFGLLDCSPLPLHANMIQKQRLK 580
>gi|195154787|ref|XP_002018294.1| GL17630 [Drosophila persimilis]
gi|194114090|gb|EDW36133.1| GL17630 [Drosophila persimilis]
Length = 807
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/491 (35%), Positives = 251/491 (51%), Gaps = 89/491 (18%)
Query: 83 KGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSG---VQKQEEKNLKNETGKKKKKKK 139
K K K+ S+K K+ + EED + D D +E+ SG + + + + +NE
Sbjct: 133 KEKRQKRKESRKLKKENIEEEDGSESD-DNEENPSGQYVLLRPPQSDDENEE-------- 183
Query: 140 KGKKIKTVEESVAVSNGPDDAEEELVNEA-EISTEFDAWNELRLHPLLMKSIYRLQFKEP 198
A D+ +LV + E E AWN L + +++++ FK P
Sbjct: 184 ------------AAEPSSDEEVPQLVPASTEYEDELSAWNGLGVPSNILRALAEQGFKAP 231
Query: 199 TPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE--------KAAKML- 249
T IQ +PAA H KD++GAAETGSGKTLAFG+P++ ++E ++ KA K+
Sbjct: 232 TQIQSMTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNASSGIRKAPKVKG 291
Query: 250 ----------------------------EDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
ED E + + L L++TPTRELA+QV
Sbjct: 292 APIAPPADDEHELTPPPDELDHVSGASDEDSDAEEREQRKQTPLYGLVLTPTRELAVQVK 351
Query: 282 DHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
+HL AK ++V I GG+S KQER+L+ PE+VV TPGRLWEL + G +HL +L
Sbjct: 352 NHLVSAAKYTGIKVAAIFGGLSVAKQERVLRQCPEIVVATPGRLWELFAQGNQHLNKLDD 411
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
LSF V+DE DRM+E GHF EL+S++ +L EQ ++++RQ V
Sbjct: 412 LSFLVIDETDRMVEKGHFEELRSLLKVL--------NADEQ----------KKQQRQNFV 453
Query: 402 FSATIALSADFRKKLKHGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
FSAT+ L D ++ ++ KQ+V+ IE+L E G+ + IVD+T+
Sbjct: 454 FSATLTLVHDLPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSTQQ 510
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
A L ES + C + KD YLYY + H GRTIVFC SI +R ++++ +L L
Sbjct: 511 TAQTLTESRLLCPIDQKDFYLYYFIQRH-PGRTIVFCNSIDCVRRLATIFGLLDCSPLPL 569
Query: 517 HAQMQQRARLK 527
HA M Q+ RLK
Sbjct: 570 HANMIQKQRLK 580
>gi|405950996|gb|EKC18946.1| ATP-dependent RNA helicase DDX24 [Crassostrea gigas]
Length = 1159
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 232/408 (56%), Gaps = 44/408 (10%)
Query: 130 ETGKKKKKK------KKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLH 183
+T +K+K+K + K++K +EES + PDD + I+ + AW +L +
Sbjct: 180 KTARKRKEKFVDSYSSERKRMKVMEESEEETKSPDDGK--------INEKMAAWKDLFVP 231
Query: 184 PLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI----MQRLL 239
+++++ + +F PTPIQ +P+A KDV+GAAETGSGKTLAFG+P+ +++
Sbjct: 232 KEVLQALCKSKFFAPTPIQAMALPSAIRDRKDVVGAAETGSGKTLAFGIPVGDLGCVKVI 291
Query: 240 EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIV 299
++ + + L D G +K + K L ALI+ PTRELA+QV DHL+ A ++ + PI+
Sbjct: 292 DDADFSELGLPDAGPLLKK-SNKSPL-ALILQPTRELAVQVKDHLQVAAAYTDITIAPIL 349
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 359
GGMS EKQ+R+LK P+++V TPGRLWELMS + +L + + V+DEADRMIE GHF
Sbjct: 350 GGMSAEKQKRILKKCPDILVATPGRLWELMS-QDPYLSRIDEVDTLVIDEADRMIEKGHF 408
Query: 360 RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 419
EL I++ + ++E+ +N RQT VFSAT+ L ++
Sbjct: 409 EELTQILNYI--------NRNEKKKNT----------RQTFVFSATLTLVHSGPQR---- 446
Query: 420 SLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYY 479
S + K ++ +ETL R MR ++DLT L E+ I C E+KD YLYY
Sbjct: 447 SSRKKMALTEEKKLETLMSRIQMREKPKVIDLTRKIGTVETLTEARINCTLEEKDLYLYY 506
Query: 480 ILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L + GRT+VF S +R + S+ +L + LHA M Q+ RLK
Sbjct: 507 FL-IQYPGRTLVFANSKDCIRRLISIFTLLKTNPLPLHADMHQKQRLK 553
>gi|392573357|gb|EIW66497.1| hypothetical protein TREMEDRAFT_65359 [Tremella mesenterica DSM
1558]
Length = 744
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 251/495 (50%), Gaps = 65/495 (13%)
Query: 61 GGFLSLEEIDEASYNLQ-----------IPKPEKGKPGKKLNSKKRKRSSANEEDSGDGD 109
GG + LEE+D+ + IP P GK +K KR + DG+
Sbjct: 45 GGMMMLEELDDVAVEWVQDEGGAKKARFIPAPNSKGKGKAKETKNGKRIAEASNQGIDGE 104
Query: 110 GDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAE 169
DED + + + +E +E VEE D E+ L +EA
Sbjct: 105 ---DEDET-INEDQEITGDDEI----------PSFSRVEEE---DMNEVDQEDHLGDEAF 147
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
T W+ + LHP+L +S+ +L F +PT IQ +P G+DV+G AETGSGKTLA
Sbjct: 148 DDTLLPQWSSIPLHPILKRSLSKLGFTKPTDIQARALPVCL-AGRDVVGVAETGSGKTLA 206
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
+ LPI+ LL K L +LI+ PTRELALQV DHL V +
Sbjct: 207 YALPILSYLLRNPRATTS--------------KRTLSSLILCPTRELALQVVDHLNTVIR 252
Query: 290 GI--------NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
+ V ++GG+S +KQ+R+L +V+V TPGRLW+L+ + E+
Sbjct: 253 QTFPEKKGPPRISVGSVIGGLSAQKQQRILDRGCDVLVATPGRLWDLIKANDDLAAEIKR 312
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSNKGQSEQTQNCVTVSS-----LQRK 395
+ F V+DEADRMIENGHF EL+SI+ + + S +G +E+ +S R
Sbjct: 313 IRFLVIDEADRMIENGHFAELESIVRLTERQSRLSGRGAAEEEDPVFAATSSLDDVSARS 372
Query: 396 KRQTLVFSATIA--LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLT 452
QT +FSAT++ L +F++K K GS K + + L E L ER R N ++DL+
Sbjct: 373 DMQTFIFSATLSKDLQQNFKRK-KRGSQKGDKKSSAL---EDLVERLDFRDKNPEVIDLS 428
Query: 453 NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
+ L+ES IEC +KD +LYY L + GR++VF SI +R + L ++L +
Sbjct: 429 PEGGVVAMLKESMIECVLSEKDLFLYYFL-LRYPGRSLVFVGSIDGIRRLVPLFELLRVP 487
Query: 513 VWTLHAQMQQRARLK 527
VW LH+Q+QQ+ RLK
Sbjct: 488 VWPLHSQLQQKQRLK 502
>gi|328778593|ref|XP_001122313.2| PREDICTED: ATP-dependent RNA helicase DDX24-like [Apis mellifera]
Length = 747
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 214/388 (55%), Gaps = 57/388 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L + ++K++ QF +PTPIQ +P A +D++GAAETGSGKTLAFG+PI+
Sbjct: 140 WQILGVSTPIIKALKDQQFYQPTPIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIIN 199
Query: 237 RLLEEREKAA------------KMLEDKG---------------------EEAEKYAPKG 263
+LE + K + K++E+KG E+ +K +
Sbjct: 200 GILELKNKQSDQINIKSEKERNKIIENKGWICSENKTIEIDNSSSESDYEEDIDKNYMEK 259
Query: 264 HLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPG 323
L ALI+TPTRELA+Q+ DHL AK +++++ ++GGM+ KQER+L PE+V+ TPG
Sbjct: 260 PLYALILTPTRELAIQIKDHLTKAAKYVDIKIAVVLGGMAAVKQERILSKGPEIVIATPG 319
Query: 324 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQT 383
RLWEL+ G HL ++ ++ + V+DE DRM+E GHF+ELQ +++ + N + K
Sbjct: 320 RLWELIQYGNPHLCKVDSVKYLVIDETDRMLEKGHFQELQQLLEKI---NTNEK------ 370
Query: 384 QNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK----HGSLKSKQSVNGLNSIETLSER 439
+ ++RQT VFSAT+ + D + L+ + + +E + E
Sbjct: 371 ---------RLRERQTFVFSATLTMVHDIPEYLQKKKRKHIKSKIKKLTPSQKLEKIMEL 421
Query: 440 AGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAAL 499
G++ N I+D+T + L E I C + KD YLYY L + GRT+VFC SI +
Sbjct: 422 VGIK-NPKIIDVTKESGITANLTECRIACTIDHKDYYLYYFLKRYT-GRTLVFCNSIGCV 479
Query: 500 RHISSLLKILGIDVWTLHAQMQQRARLK 527
+ +S+L IL LHA MQQR RLK
Sbjct: 480 KRLSTLFGILDCKPLPLHASMQQRQRLK 507
>gi|353235877|emb|CCA67883.1| related to MAK5-ATP-dependent RNA helicase [Piriformospora indica
DSM 11827]
Length = 703
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 214/366 (58%), Gaps = 35/366 (9%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L P L++ I F +PTPIQ+ +P + G+DVIG A+TGSGKTLAF LPI++
Sbjct: 127 WSNLGLSPTLLRRIKDQGFIKPTPIQRETLPLST-SGRDVIGIAQTGSGKTLAFALPILR 185
Query: 237 RLLE-EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--- 292
+L R K+ + K +L+ALI+ PTRELALQV+ H+ A +
Sbjct: 186 HILSTNRLKSLRR------------QKRNLKALIVAPTRELALQVSAHINACAPQRSKEE 233
Query: 293 --------VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
V V IVGGMS +KQ R+L+ +V+V TPGRLWEL+S ++ ++ + F
Sbjct: 234 IEAHLPPLVSVATIVGGMSQQKQTRMLERGADVIVATPGRLWELLSDNDELTTQIRQVRF 293
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
FVLDEADRM+ENGHF EL II + + S + Q ++ + S + + QT VFS
Sbjct: 294 FVLDEADRMVENGHFAELDKIIRLTARPDPNSLEAQIQEVKLEDDTSDSAQNQMQTFVFS 353
Query: 404 ATIALSADFRKKLK-HGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKL 461
AT +S D ++ LK H K K S ++I+ L R R AIVDL+ + +
Sbjct: 354 AT--MSKDLQQNLKRHKRFKDKSS----STIDDLILRLDFRDEQPAIVDLSPKDGVVSTF 407
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ES +EC DKDAYLYY L + GR+++F +SI +R ++ LL +L + W +H+QM+
Sbjct: 408 QESKVECITTDKDAYLYYFL-LRYPGRSLIFLSSIDGIRRLAPLLDLLQVKSWPIHSQME 466
Query: 522 QRARLK 527
QR RLK
Sbjct: 467 QRQRLK 472
>gi|327302418|ref|XP_003235901.1| ATP-dependent RNA helicase MAK5 [Trichophyton rubrum CBS 118892]
gi|326461243|gb|EGD86696.1| ATP-dependent RNA helicase MAK5 [Trichophyton rubrum CBS 118892]
Length = 746
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 268/485 (55%), Gaps = 49/485 (10%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEE--DSGDGD---GDGDEDG 116
GF LEEI+ + I +P G+ K L +K ++ NEE D DG+ G GDE
Sbjct: 57 GFYGLEEIE----GVDIIRPADGEQLKFLAAKSSIKTGDNEELDDYDDGEEWLGFGDE-- 110
Query: 117 SGVQKQEEK---NLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEA--EIS 171
V++Q E + K+ KKKK KK+ +K + +++ V + P ++NEA E
Sbjct: 111 --VEQQPEPKQLSFKSTENKKKKDKKEREKPRQEKDNAKVQSIP----FSILNEANEEPD 164
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+ AW+ L L P L S+ RL+F +PTPIQKA IP G+DVIG A TGSGKTLAFG
Sbjct: 165 VDVSAWDSLDLRPELQTSLSRLKFAQPTPIQKATIPEILG-GRDVIGKAATGSGKTLAFG 223
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---A 288
LPI+Q LL +E+ L + ++K ALI++PTRELA Q+ HLK V A
Sbjct: 224 LPILQYLLNRQEQHPSTLLALPKSSDKTP-----IALILSPTRELAHQLVKHLKEVTSSA 278
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
++ + + GG+S KQ+R L A +++VGTPGRLW+++S + L +L ++ F V+D
Sbjct: 279 PNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQILTKLRSIKFLVVD 337
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++ GHF+E+ ++ L T S+Q + + RQTLVFSAT
Sbjct: 338 EADRLLSEGHFKEVGELLSALDRTR-----TSDQDVDETPEEEEEPAGRQTLVFSAT--- 389
Query: 409 SADFRKKLKHGSLKSKQSV--NGLNSIET----LSERAGMRANVAIVDLTNMCVLANKLE 462
F+K L+ K S N L+ E+ L E +D+ + +A+ L+
Sbjct: 390 ---FQKGLQQKLAKRDHSFHDNLLDKKESMEYLLKELRFKDEKPRFIDVNPVSQMADNLK 446
Query: 463 ESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
E IEC +KD YLY +L + + RT+VF SI+++R ++ L+ L + +LH+ M Q
Sbjct: 447 EGIIECSAMEKDLYLYSVLLFYPRYRTLVFTNSISSVRRLTHFLQNLNLPALSLHSSMAQ 506
Query: 523 RARLK 527
+ARL+
Sbjct: 507 KARLR 511
>gi|260829397|ref|XP_002609648.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
gi|229295010|gb|EEN65658.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
Length = 844
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 168/515 (32%), Positives = 260/515 (50%), Gaps = 88/515 (17%)
Query: 70 DEASYNLQIPKPEKGKPGKKLNSKKRK--RSSANEEDSGDGDGDGDEDGSGVQK------ 121
D + N ++ +P K K +L+S+K + + +E D DG S ++
Sbjct: 170 DNTNINKEVTEPLKKKQRMELSSQKDGDCKDESVDEPGTDAATDGVTKKSRKERRNERRK 229
Query: 122 QEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELR 181
Q + LK + +K+++KK+ +K+ ++ G + + V + + + +W L
Sbjct: 230 QRLELLKRQREEKRERKKQERKM-------PLAQG-HSCKPQSVAKKSVDADMTSWTPLF 281
Query: 182 LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE 241
+ ++++ + F +PTPIQ IP A KDV+GAAETGSGKTLAFG+PI+ R+LE
Sbjct: 282 VPDVVLRGLADQGFTQPTPIQAQTIPQAIQAHKDVVGAAETGSGKTLAFGIPILHRILEW 341
Query: 242 REKAAKM----LEDKGEE-----------------------------------AEKYAPK 262
+E+ + L +K EE A + AP
Sbjct: 342 KERNLQSEEGDLGNKNEEVPEDAADDDDDQEMESGGLGCVHVEDDITLPPELEALQEAPP 401
Query: 263 ----------GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L AL++TPTRELA+QV +H+K AK NV+V +VGGM+ +KQ+R+L
Sbjct: 402 LSAPTPQKVVSPLLALVLTPTRELAVQVANHIKAAAKYTNVKVAVLVGGMAPQKQKRVLD 461
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+PE++V TPGRLWE++ HL +L+ L V+DEADRM+E GHF EL +++D +
Sbjct: 462 RQPEIIVATPGRLWEMVEQSHPHLSDLNQLQCLVIDEADRMVEKGHFAELGNLLDKI--- 518
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
NG ++ ++RQT VFSAT+ + ++ L
Sbjct: 519 NGEDRN----------------RRRQTFVFSATLTMVHSGPQRKIMKKKFKMDKDKKLGQ 562
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
L +R G+R+ +VDL+ + L E+ I C E+KD YLYY L + GRT+VF
Sbjct: 563 ---LMDRVGIRSKPLVVDLSRQQGTVDTLTEARITCSTEEKDIYLYYFL-LQYPGRTLVF 618
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
SI +R ++SLL +L LHA M Q+ RLK
Sbjct: 619 ANSIDCIRRLTSLLGLLQKSPLPLHANMHQKQRLK 653
>gi|391340745|ref|XP_003744697.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Metaseiulus
occidentalis]
Length = 757
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 211/381 (55%), Gaps = 57/381 (14%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
EE V+V DDAE+ L E W + P ++K++ +L++ EP+ IQ C+
Sbjct: 233 EEDVSVE--LDDAEKALTKE---------WEIFEIEPRILKALAQLRYTEPSEIQSQCLI 281
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
A D++GAAETGSGKTLAFG+P++ RLL+ER + L A
Sbjct: 282 PAIRDRLDILGAAETGSGKTLAFGIPLVHRLLQER------------------CRNKLGA 323
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+TPTRELA+Q+ HL + K N+ VV IVGG+S EKQ RLL RPE++V TPGRL+E
Sbjct: 324 LILTPTRELAVQIKKHLMDITKFTNLHVVCIVGGLSHEKQTRLLAKRPEIIVATPGRLFE 383
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
L+ + +L ++ V+DEADRMI+ GHF E+Q I+ + N + G
Sbjct: 384 LVQEDPQLQEQLISVRCLVIDEADRMIQKGHFEEMQLILKFM---NSNRIG--------- 431
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
KRQ LVFSAT+ + +++ K K+ L+ ++ + GM
Sbjct: 432 --------KRQNLVFSATLTMDPHLPERVIER--KKKKRTGRLDQLKAM---LGM-TKPK 477
Query: 448 IVDLTNMCVLANKLEESFIEC-KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
I+D T A L ES I C K E KDA LYY L +H GRT+VFC SI +R + S+L
Sbjct: 478 IIDTTKKIGTAETLTESRIYCEKPEQKDALLYYFLKMH-PGRTLVFCNSIDCVRRLKSVL 536
Query: 507 KILGIDVWTLHAQMQQRARLK 527
+ L + LHA+MQQR RLK
Sbjct: 537 EALRMKPMGLHAEMQQRQRLK 557
>gi|326479695|gb|EGE03705.1| ATP-dependent RNA helicase MAK5 [Trichophyton equinum CBS 127.97]
Length = 742
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 266/478 (55%), Gaps = 39/478 (8%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGD---GDEDGSG 118
GF LEEI+ + I +P G+ K L SK ++ NE+ D DG+ G D
Sbjct: 57 GFYGLEEIE----GVDIVRPADGEQLKFLASKGSIKTGNNEDLDDDDDGEEWEGFSDEVA 112
Query: 119 VQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWN 178
Q + EK T KKKK K+ +K + +++ V + P E EA++ + AW+
Sbjct: 113 QQPEPEKLPSKSTENKKKKDKEREKPRQEKDNAKVQSIPFSVLNETDEEADV--DVSAWD 170
Query: 179 ELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRL 238
L L P L S+ RL+F +PTPIQKA IP G+DVIG A TGSGKTLAFGLPI+Q L
Sbjct: 171 SLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-SGRDVIGKAATGSGKTLAFGLPILQYL 229
Query: 239 LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRV 295
L+ +EK L +++ ALI++PTRELA Q+ HLK V A ++ +
Sbjct: 230 LKRQEKRPSALSKSSDKSPI--------ALILSPTRELAHQLVKHLKEVTSSAPNVDAYI 281
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG+S KQ+R L A ++VVGTPGRLW+++S K L +L ++ F V+DEADR++
Sbjct: 282 ASVTGGLSVYKQQRQL-AEADIVVGTPGRLWDMVSSTPKILTKLRSIKFLVVDEADRLLS 340
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF+E+ ++ L T S++ E ++ +S RQTLVFSAT F+K
Sbjct: 341 EGHFKEVGELLSALDKTRTSDEDVDEASEEEEEPAS-----RQTLVFSAT------FQKG 389
Query: 416 LKHGSLKSKQSV-NGL----NSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECK 469
L+ K S N L S+E L ++ + +D+ + +A+ L+E IEC
Sbjct: 390 LQQKLAKRDHSFHNNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVSQMADNLKEGIIECS 449
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + + RT+VF SI+++R ++ L+ L + +LH+ M Q+ARL+
Sbjct: 450 AMEKDLYLYSVLLFYPKHRTLVFTNSISSVRRLTQFLQNLNLPALSLHSSMAQKARLR 507
>gi|195429401|ref|XP_002062751.1| GK19535 [Drosophila willistoni]
gi|194158836|gb|EDW73737.1| GK19535 [Drosophila willistoni]
Length = 823
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 239/451 (52%), Gaps = 73/451 (16%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVN---EAEISTE-FDAWNELRLH 183
K ET + + + ++S+ ++ +LV+ E STE +W+ L +
Sbjct: 167 KEETDSSSNEDYSSDRFSLIRPPASISSDEEEEAPQLVSASTEGFTSTEDLSSWHGLGVP 226
Query: 184 PLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE 243
+++++ F+EPT IQ +PAA H KD++GAAETGSGKTLAFG+P++ +++ +E
Sbjct: 227 QPILRALAEKGFREPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMDLKE 286
Query: 244 KAAK-----MLEDKGEEAEKY--APKGH-------------------------------- 264
+ AK + KGE+++K P+
Sbjct: 287 RNAKHGIRKAPKVKGEDSQKSEEPPRDDEHELTPPPEELDHVSGASDEDDSDLENHSASR 346
Query: 265 ---LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGT 321
L AL++TPTRELA+QV +HL AK +RV I GG++ KQER+L+ PE+VV T
Sbjct: 347 ERPLYALVLTPTRELAVQVKNHLVAAAKYTGIRVATIFGGLAVAKQERVLRQGPEIVVAT 406
Query: 322 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE 381
PGRLWEL G HL +++ +SF V+DE DRM+E GHF EL+S++ +L NG +
Sbjct: 407 PGRLWELYCQGNHHLSKINDVSFLVIDETDRMVEKGHFEELRSLLKVL---NGDEQ---- 459
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS-----KQSVNGLNSIETL 436
+++ RQ VFSAT+ L D ++ ++ KQ+V+ IE+L
Sbjct: 460 -----------KKQLRQNFVFSATLTLVHDLPDHMQKRNVGKKPKFVKQTVD--QKIESL 506
Query: 437 SERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSI 496
E G+ IVD+T+ A L ES + C + KD +LYY + H GRTIVFC SI
Sbjct: 507 IEELGI-MQPKIVDITSSQQTAQNLTESRLLCPLDQKDNHLYYFIQRHP-GRTIVFCNSI 564
Query: 497 AALRHISSLLKILGIDVWTLHAQMQQRARLK 527
++ +++L +L + LHA M Q+ RLK
Sbjct: 565 DCVKRLATLFGLLDCNPLPLHANMIQKQRLK 595
>gi|326475209|gb|EGD99218.1| ATP-dependent RNA helicase MAK5 [Trichophyton tonsurans CBS 112818]
Length = 742
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 179/478 (37%), Positives = 266/478 (55%), Gaps = 39/478 (8%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGD---GDEDGSG 118
GF LEEI+ + I +P G+ K L SK ++ NE+ D DG+ G D
Sbjct: 57 GFYGLEEIE----GVDIVRPADGEQLKFLASKGSIKTGNNEDLDDDDDGEEWEGFSDEVA 112
Query: 119 VQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWN 178
Q + EK T KKKK K+ +K + +++ V + P E EA++ + AW+
Sbjct: 113 QQPEPEKLPSKSTENKKKKDKEREKPRQEKDNAKVQSIPFSVLNETDEEADV--DVSAWD 170
Query: 179 ELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRL 238
L L P L S+ RL+F +PTPIQKA IP G+DVIG A TGSGKTLAFGLPI+Q L
Sbjct: 171 SLDLRPELQTSLSRLKFAQPTPIQKATIPEIL-SGRDVIGKAATGSGKTLAFGLPILQYL 229
Query: 239 LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRV 295
L+ +EK L +++ ALI++PTRELA Q+ HLK V A ++ +
Sbjct: 230 LKRQEKRPSALSKSSDKSPI--------ALILSPTRELAHQLVKHLKEVTSSAPNVDAYI 281
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG+S KQ+R L A ++VVGTPGRLW+++S K L +L ++ F V+DEADR++
Sbjct: 282 ASVTGGLSVYKQQRQL-AEADIVVGTPGRLWDMVSSTPKILTKLRSIKFLVVDEADRLLS 340
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF+E+ ++ L T S++ E ++ +S RQTLVFSAT F+K
Sbjct: 341 EGHFKEVGELLSALDKTRTSDEDVDEASEEEEEPAS-----RQTLVFSAT------FQKG 389
Query: 416 LKHGSLKSKQSV-NGL----NSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECK 469
L+ K S N L S+E L ++ + +D+ + +A+ L+E IEC
Sbjct: 390 LQQKLAKRDHSFHNNLLDKKESMEYLLKKLRFKDEKPRFIDVNPVSQMADNLKEGIIECS 449
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + + RT+VF SI+++R ++ L+ L + +LH+ M Q+ARL+
Sbjct: 450 AMEKDLYLYSVLLFYPKHRTLVFTNSISSVRRLTQFLQNLNLPALSLHSSMAQKARLR 507
>gi|20130173|ref|NP_611467.1| CG9143 [Drosophila melanogaster]
gi|7302399|gb|AAF57487.1| CG9143 [Drosophila melanogaster]
gi|33636633|gb|AAQ23614.1| LD11580p [Drosophila melanogaster]
Length = 813
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 242/465 (52%), Gaps = 93/465 (20%)
Query: 134 KKKKKKKGKKIKTVEES---------VAVSNGPDDAEEELVNEAE--------------- 169
+K+KK KGK+ EES + P D EEE+V +
Sbjct: 144 RKQKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTDEEAPEL 203
Query: 170 --IST----EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
IST + AWN L + +++++ FK PT IQ +PAA H KD++GAAETG
Sbjct: 204 VPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETG 263
Query: 224 SGKTLAFGLPIMQRLLEERE--------KAAKM--------------------------L 249
SGKTLAFG+P++ ++E ++ KA K+
Sbjct: 264 SGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGA 323
Query: 250 EDKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQ 307
D+ +AE+ A + L L++TPTRELA+QV +HL AK +RV I GG++ KQ
Sbjct: 324 SDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQ 383
Query: 308 ERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 367
ER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DRM+E GHF EL+S++
Sbjct: 384 ERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEELRSLLK 443
Query: 368 MLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS---- 423
+L EQ ++ +RQ V+SAT+ L D ++ ++
Sbjct: 444 VL--------NSDEQ----------KKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKF 485
Query: 424 -KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILS 482
KQ+V+ IE+L E G+ + IVD+T+ A L ES + C + KD +LYY +
Sbjct: 486 VKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLCPIDHKDYHLYYFIQ 542
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
H GRTIVFC SI ++ +++L +L + LHA M Q+ RLK
Sbjct: 543 RH-PGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLK 586
>gi|194881539|ref|XP_001974888.1| GG20872 [Drosophila erecta]
gi|190658075|gb|EDV55288.1| GG20872 [Drosophila erecta]
Length = 815
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 227/415 (54%), Gaps = 67/415 (16%)
Query: 158 DDAEEELVNEAEIST----EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
D ++EE IST + AWN L + +++++ FK PT IQ +PAA H
Sbjct: 196 DSSDEEAPELVPISTGEGEDVSAWNGLGVPASILRALGEQGFKAPTQIQALTLPAAIHGK 255
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEERE--------KAAKM----------------- 248
KD++GAAETGSGKTLAFG+P++ ++E ++ KA K+
Sbjct: 256 KDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPP 315
Query: 249 ---------LEDKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGINVRVVP 297
D+ +AE++A + L L++TPTRELA+QV +HL AK +RV
Sbjct: 316 PEELDHVSGASDEESDAEEHAQRMQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAA 375
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DRM+E G
Sbjct: 376 IFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKG 435
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 417
HF EL+S++ +L EQ ++ +RQ V+SAT+ L D ++
Sbjct: 436 HFEELRSLLKVL--------NSDEQ----------KKHQRQNFVYSATLTLVHDLPDHMQ 477
Query: 418 HGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
++ KQ+V+ IE+L E G+ + IVD+T+ A L ES + C +
Sbjct: 478 KRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLCPIDH 534
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
KD +LYY + H GRTIVFC SI ++ +++L +L + LHA M Q+ RLK
Sbjct: 535 KDYHLYYFIQRH-PGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLK 588
>gi|340717162|ref|XP_003397056.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Bombus terrestris]
Length = 766
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 234/457 (51%), Gaps = 86/457 (18%)
Query: 137 KKKKGKKIKTVEESVAVSNGPD---DAEEELVNEAEIS----TEFDA--WNELRLHPLLM 187
KK +G+K K + + ++ NG D + ++ NE + DA W L + ++
Sbjct: 96 KKLEGRKAKKIPKCLSPKNGLDISPNNNDQFSNECNKDKNDVYDIDAQQWYMLGVPTPVI 155
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAA- 246
K++ QF EPTPIQ +P A +D++GAAETGSGKTLAFG+PI+ +LE + K +
Sbjct: 156 KALKDQQFHEPTPIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIINGILELKNKQSQ 215
Query: 247 ------------------------KMLE--------DKGEEAEKYAPKG----------- 263
KM+E D E E G
Sbjct: 216 QSDMEFGEEITGIIKNKGWICSENKMVENDNSSSESDYEEHIEGLNKNGIGCVRVINNVK 275
Query: 264 ---------HLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
L ALI+TPTRELA+Q+ DHL K +++V ++GGM+ KQER+L
Sbjct: 276 MSKTQNYTKPLYALILTPTRELAIQIKDHLTKAIKYTDIKVAVVLGGMAAVKQERILSKG 335
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 374
PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+ELQ +++ + M
Sbjct: 336 PEIVIATPGRLWELIQQGNPHLSKVDSIKYLAIDETDRMLEKGHFQELQQLLEKINM--- 392
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD---FRKKLKHGSLKSK-QSVNGL 430
N+ + E+ RQT VFSAT+ + D + +K K KSK Q +
Sbjct: 393 -NEKKVEE--------------RQTFVFSATLTMVHDIPEYLEKXKRKHTKSKIQKLTPA 437
Query: 431 NSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTI 490
++ + E G++ N I+D+T A L E I C + KD YLYY L + GRT+
Sbjct: 438 QKLQKIMELVGIK-NPKIIDVTKKSGTATNLTECRIACTIDHKDYYLYYFLKRYA-GRTL 495
Query: 491 VFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
VFC SI ++ +++LL IL LHA MQQR RLK
Sbjct: 496 VFCNSIGCVKRLATLLGILDCKPLPLHASMQQRQRLK 532
>gi|242022824|ref|XP_002431838.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
gi|212517170|gb|EEB19100.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
Length = 543
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 201/352 (57%), Gaps = 26/352 (7%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+WN +H ++ ++Y ++ EPT IQ C+ A D++GAAETGSGKTLAFG+PI+
Sbjct: 3 SWNSFGIHEKILYALYDKKYFEPTKIQSRCLGPAICGQMDILGAAETGSGKTLAFGIPIV 62
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+L EK L E + K +L ALI+TPTRELA+QV +HL + K + +
Sbjct: 63 NGILSIMEKE---LNQSIESLKMKNEKNNLYALILTPTRELAVQVRNHLNDICKYTKINI 119
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGG++ EKQER+L RPE++V TPGRLWEL++ HL + L + +DE DRM+E
Sbjct: 120 ALIVGGLAHEKQERILNKRPEIIVATPGRLWELVNDNNIHLSNIKNLRYLAIDETDRMLE 179
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF EL +++ + + ++KKRQ +FSAT+ + D
Sbjct: 180 KGHFTELNDLLERINLNEN------------------KKKKRQNFLFSATLTVVHDPPSY 221
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
LK K+K+ G ++ L + G+ N IVD+TN V A L E I C+ E+KD
Sbjct: 222 LKGK--KNKRITPG-QKLQDLISKIGI-TNPKIVDITNTHVTAENLSEFKILCQFEEKDY 277
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YL+ L +GR ++FC SI ++ +++LL I+ LHA M+Q+ RL+
Sbjct: 278 YLFQCLRSQ-KGRFMIFCNSIGCVKRLANLLNIVNFKPLPLHANMEQKQRLR 328
>gi|56201305|dbj|BAD72907.1| unnamed protein product [Drosophila simulans]
gi|56201324|dbj|BAD72925.1| unnamed protein product [Drosophila sechellia]
Length = 814
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 234/433 (54%), Gaps = 70/433 (16%)
Query: 140 KGKKIKTVEESVAVSNGPDDAEEELV----NEAEISTEFDAWNELRLHPLLMKSIYRLQF 195
+ +++ E+S D+ ELV +EAE + AWN L + +++++ F
Sbjct: 180 EAEEVAKAEDSADQQESSDEEAPELVSIPTDEAE---DVSAWNGLGVPASILRALGEQGF 236
Query: 196 KEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE--------KAAK 247
K PT IQ +PAA H KD++GAAETGSGKTLAFG+P++ ++E ++ KA K
Sbjct: 237 KTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPK 296
Query: 248 M--------------------------LEDKGEEAEKYAPKGH--LRALIITPTRELALQ 279
+ D+ +AE++ + L L++TPTRELA+Q
Sbjct: 297 VKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQ 356
Query: 280 VTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
V +HL AK +RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++
Sbjct: 357 VKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKI 416
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQT 399
+SF V+DE DRM+E GHF EL+S++ +L EQ ++ +RQ
Sbjct: 417 EDVSFLVIDETDRMVEKGHFEELRSLLKVL--------NSDEQ----------KKHQRQN 458
Query: 400 LVFSATIALSADFRKKLKHGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
V+SAT+ L D ++ ++ KQSV+ IE+L E G+ + IVD+T+
Sbjct: 459 FVYSATLTLVHDLPDHMQKRNVGKRPKFVKQSVD--QKIESLIEELGI-SQPKIVDITSS 515
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
A L ES + C + KD +LYY + H GRTIVFC SI ++ +++L +L +
Sbjct: 516 QQTAQTLTESRLLCPIDHKDYHLYYFIQRHP-GRTIVFCNSIDCVKRLATLFGLLDCNPL 574
Query: 515 TLHAQMQQRARLK 527
LHA M Q+ RLK
Sbjct: 575 PLHANMIQKQRLK 587
>gi|147810431|emb|CAN65340.1| hypothetical protein VITISV_038405 [Vitis vinifera]
Length = 458
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 193/286 (67%), Gaps = 32/286 (11%)
Query: 13 SKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDG----------- 61
+ KT RRKRT + E+L+SL WN S D DPF+ VGS+EL+G
Sbjct: 2 AAKTPNARRKRTAVNPDLERLESLPWNPSLPDVD-DPFSLFVGSDELEGALHGFSRETSG 60
Query: 62 --GFLSLEEIDEASYNLQI--PKPE--KGKPGKKLNSKKRKRSSANEEDSGDGDGDGDED 115
GFLSLEEIDE+ Y L+I P PE KG P + SKKRK S N D GDG ED
Sbjct: 61 ESGFLSLEEIDESEYGLEIHEPGPEDKKGNPKQSKKSKKRKSSGDN-----DSSGDGVED 115
Query: 116 GSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFD 175
G+ +++ + KKKKKKK KK +T EES V + DD E + V+EAE F
Sbjct: 116 GT--EEEVVDKKNFKKKKKKKKKKVTKKNQTNEESATVVDK-DDVEGDSVDEAE----FY 168
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
WNELR+HPLLMKSI+RL FK+PTPIQKACIPAAAHQGKDV+GA+ETGSGKTLA GLPI+
Sbjct: 169 EWNELRIHPLLMKSIHRLGFKQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPIL 228
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
QRLLEEREKAA+ L + GE EKYA G LRALIITPTRELALQ+T
Sbjct: 229 QRLLEEREKAAEPLAENGE--EKYAEGGILRALIITPTRELALQIT 272
>gi|261205266|ref|XP_002627370.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
gi|239592429|gb|EEQ75010.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
Length = 772
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 178/564 (31%), Positives = 274/564 (48%), Gaps = 81/564 (14%)
Query: 9 TSEHSKKTKPNRR-KRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLE 67
T + S+K+K +R + T GE +D L W L E GF LE
Sbjct: 9 TRDPSRKSKKRQRVEVTGADGEIVGIDQLDWKE----------VALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNL 127
EID + I +P K S+ + +++A ++ S D D DE SG+ E N
Sbjct: 59 EID----GVDIVRPTGNGEVKFKVSRNKVKNTAAKDISSDTKDDADE-WSGISDDEGPND 113
Query: 128 KNETGKKKKK-----------------------------------KKKGKKIKTVEESVA 152
+ K+K+ KK ++ ++
Sbjct: 114 EGVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKTEKLKETKLQNNKKATPKDELQSGIS 173
Query: 153 VSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
+D EEE+ + AW L + + S+ +L+F +PTPIQ ACIPA A
Sbjct: 174 FEALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA-A 224
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
G DV+G A TGSGKTLAFG+PI++ LE R E A K ALI++P
Sbjct: 225 GHDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDRESAGKDPI-----ALILSP 279
Query: 273 TRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
TRELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++
Sbjct: 280 TRELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVI 338
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV 389
S G L + F V+DEADR++ GHF+E++ I+ L + ++ + + + T
Sbjct: 339 STGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTD 398
Query: 390 SSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-----LNSIETLSERAGMRA 444
+ + +RQTLVFSAT F K L+ + +G S+E L ++ R
Sbjct: 399 DASKAPRRQTLVFSAT------FHKGLQQKLAGKSRFFDGDLLDNKQSMEYLLKKLNFRE 452
Query: 445 N-VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHIS 503
+ +D+ + +A L+E +EC +KD YLY ++ H + RT+VF SI+A+R ++
Sbjct: 453 DKPKFIDVNPVAQMAENLKEGLVECPAMEKDLYLYTLMLYHPKHRTLVFTNSISAVRRLT 512
Query: 504 SLLKILGIDVWTLHAQMQQRARLK 527
+ L+ L + LH+ M Q+ARL+
Sbjct: 513 AFLQNLNLPALALHSSMAQKARLR 536
>gi|195486926|ref|XP_002091709.1| GE13811 [Drosophila yakuba]
gi|194177810|gb|EDW91421.1| GE13811 [Drosophila yakuba]
Length = 808
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 226/415 (54%), Gaps = 67/415 (16%)
Query: 158 DDAEEELVNEAEIST----EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
D ++EE IST + AWN L + +++++ FK PT IQ +PAA H
Sbjct: 189 DSSDEEAPELVPISTSEAEDVSAWNGLGVPASILRALGEQGFKAPTQIQALTLPAAIHGK 248
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEERE--------KAAKM----------------- 248
KD++GAAETGSGKTLAFG+P++ ++E ++ KA K+
Sbjct: 249 KDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPP 308
Query: 249 ---------LEDKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGINVRVVP 297
D+ +AE+ A + L L++TPTRELA+QV +HL AK +RV
Sbjct: 309 PEELDHVSGASDEESDAEEQAQRIQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAA 368
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++ +SF V+DE DRM+E G
Sbjct: 369 IFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKG 428
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 417
HF EL+S++ +L EQ ++ +RQ V+SAT+ L D ++
Sbjct: 429 HFEELRSLLKVL--------NSDEQ----------KKHQRQNFVYSATLTLVHDLPDHMQ 470
Query: 418 HGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
++ KQ+V+ IE+L E G+ + IVD+T+ A L ES + C +
Sbjct: 471 KRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLCPIDH 527
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
KD +LYY + H GRTIVFC SI ++ +++L +L + LHA M Q+ RLK
Sbjct: 528 KDYHLYYFIQRHP-GRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLK 581
>gi|195382239|ref|XP_002049838.1| GJ21808 [Drosophila virilis]
gi|194144635|gb|EDW61031.1| GJ21808 [Drosophila virilis]
Length = 819
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 223/423 (52%), Gaps = 69/423 (16%)
Query: 152 AVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
A S+G ++ + + + + + WN + + +M+++ ++ PT IQ +PAA H
Sbjct: 187 AASSGDEEVPQLVPSTPQDEKDMTKWNGMGVPAPIMRALAEQGYEAPTQIQAMTLPAAIH 246
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEERE--------KAAKMLEDKGEEAEKYAPKG 263
KD++GAAETGSGKTLAFG+PI+ ++E ++ KA K+ + E +
Sbjct: 247 GKKDILGAAETGSGKTLAFGIPILSGIMELKQRNDGSCIRKAPKVKGTQQVEEPPQSKDN 306
Query: 264 H----------------------------------LRALIITPTRELALQVTDHLKGVAK 289
H L A+++TPTRELA+QV +HL AK
Sbjct: 307 HNHELTPPPEELDYVSGASDEESDAEEHNQGMGRPLYAVVLTPTRELAVQVKNHLVAAAK 366
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+RV I GG+S KQER+L+ PE+VV TPGRLWEL + G +HL ++ ++F +DE
Sbjct: 367 YTGIRVAAIFGGLSVAKQERVLRQCPEIVVATPGRLWELYAQGNQHLNKIENVNFLCIDE 426
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
DRM+E GHF EL+S++ +L ++K RQ VFSAT+ L
Sbjct: 427 TDRMVEKGHFEELRSLLKVL------------------NADEDRKKLRQNFVFSATLTLV 468
Query: 410 ADFRKKLKHGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEES 464
D + ++ +L KQ+V+ IE+L E G+ + IVD+T+ A L ES
Sbjct: 469 HDLPEHMQKRNLAKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTES 525
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
+ C ++KD YLYY + H GRTIVFC SI ++ +++L +L + LHA M Q+
Sbjct: 526 RLLCAIDEKDYYLYYFVQRH-PGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQ 584
Query: 525 RLK 527
RLK
Sbjct: 585 RLK 587
>gi|196008359|ref|XP_002114045.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
gi|190583064|gb|EDV23135.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
Length = 685
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 239/455 (52%), Gaps = 80/455 (17%)
Query: 115 DGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEF 174
DG+G + KN++ KK KK K VEE V N DD ++ +
Sbjct: 41 DGTGKVSEVTNRSKNKSVKKTPKKDANK----VEEESTVENPHDDGKDNV--------NM 88
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
AW+ L++ ++K++ + F PTPIQ + AA KD+IGAAETGSGKTLA+G+PI
Sbjct: 89 KAWDSLQVPEPVLKALSDMNFLTPTPIQSLSLVAAIRDRKDIIGAAETGSGKTLAYGIPI 148
Query: 235 MQRLLEER---EKAAKMLEDKGE---EAEKYAP--------------------------- 261
+QR+L+ + +K++K DK E K P
Sbjct: 149 IQRILQLKADGKKSSKRKWDKANNKTEVIKETPSKKRKHEKGAKPTSSTSDQKSSNKTTV 208
Query: 262 ---------KGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
+ + AL++TPTRELALQV DHL+ AK ++++ IVGG+S KQ+RLL
Sbjct: 209 DNMDNSEVAESPVYALVLTPTRELALQVRDHLRSAAKYTDLKIEAIVGGISQHKQQRLLN 268
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+PE+++ TPGR+W+L+S GE HL ++ L VLDE DRMIE GH+ EL I++ LP
Sbjct: 269 YQPEIIIATPGRMWQLLSEGESHLQTINKLPLLVLDEVDRMIEYGHYAELSDILERLP-- 326
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
+R RQTLV+SAT+ ++ + + ++K K+ ++ +
Sbjct: 327 --------------------ERPLRQTLVYSATLTINKNKKVEMKKS---VKKKLSNEKT 363
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+ L E+ + V +++L + L E+ I C +DK + L Y+ + G+T+VF
Sbjct: 364 FDALIEKLKLDKKVKVINLIEKDITVETLVEARINCMVDDKLSCL-YLFCLLFPGKTLVF 422
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
S++ ++ + + ++L + LHA+MQQR RLK
Sbjct: 423 ANSVSCIKKVVDIFRLLEQPAYPLHAKMQQRQRLK 457
>gi|195336062|ref|XP_002034666.1| GM19796 [Drosophila sechellia]
gi|194126636|gb|EDW48679.1| GM19796 [Drosophila sechellia]
Length = 814
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 234/433 (54%), Gaps = 70/433 (16%)
Query: 140 KGKKIKTVEESVAVSNGPDDAEEELV----NEAEISTEFDAWNELRLHPLLMKSIYRLQF 195
+ +++ E+S D+ ELV +EAE + AWN L + +++++ F
Sbjct: 180 EAEEVAKAEDSADQQESSDEEAPELVSIPTDEAE---DVSAWNGLGVPASILRALGEQGF 236
Query: 196 KEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE--------KAAK 247
K PT IQ +PAA H KD++GAAETGSGKTLAFG+P++ ++E ++ KA K
Sbjct: 237 KTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPK 296
Query: 248 M--------------------------LEDKGEEAEKYAPKGH--LRALIITPTRELALQ 279
+ D+ +AE++ + L L++TPTRELA+Q
Sbjct: 297 VKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQ 356
Query: 280 VTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
V +HL AK +RV I GG++ KQER+L+ P++VV TPGRLWEL + G +HL ++
Sbjct: 357 VKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKI 416
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQT 399
+SF V+DE DRM+E GHF EL+S++ +L EQ ++ +RQ
Sbjct: 417 EDVSFLVIDETDRMVEKGHFEELRSLLKVL--------NSDEQ----------KKHQRQN 458
Query: 400 LVFSATIALSADFRKKLKHGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
V+SAT+ L D ++ ++ KQ+V+ IE+L E G+ + IVD+T+
Sbjct: 459 FVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSS 515
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
A L ES + C + KD +LYY + H GRTIVFC SI ++ +++L +L +
Sbjct: 516 QQTAQTLTESRLLCPIDHKDYHLYYFIQRHP-GRTIVFCNSIDCVKRLATLFGLLDCNPL 574
Query: 515 TLHAQMQQRARLK 527
LHA M Q+ RLK
Sbjct: 575 PLHANMIQKQRLK 587
>gi|194753466|ref|XP_001959033.1| GF12675 [Drosophila ananassae]
gi|190620331|gb|EDV35855.1| GF12675 [Drosophila ananassae]
Length = 813
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 224/419 (53%), Gaps = 70/419 (16%)
Query: 157 PDDAEEELVNE-AEIS----TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
P+D+++E+V E IS + AWN L + +++++ F PT IQ +PAA H
Sbjct: 190 PEDSDDEIVPELVSISNGNGVDVSAWNGLGVPAPILRALGEQGFSAPTQIQALTLPAAIH 249
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAK--------------MLEDKGEEAE 257
KD++GAAETGSGKTLAFG+P++ ++E +++ K E +E E
Sbjct: 250 GKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNVKSGIRKAPKTKGEKPAAEPADDEHE 309
Query: 258 KYAP------------------------KGHLRALIITPTRELALQVTDHLKGVAKGINV 293
P + L L++TPTRELA+QV +HL AK +
Sbjct: 310 LTPPPEELDHVSGASDEESDVEEHNQRMQRPLYGLVLTPTRELAVQVKNHLVAAAKYTGI 369
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+V I GG++ KQER+L+ PE+VV TPGRLWEL G +HL ++ SF V+DE DRM
Sbjct: 370 KVAAIFGGLAVAKQERVLRQCPEIVVATPGRLWELYCQGNQHLSKIEDASFLVIDETDRM 429
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E GHF EL+S++ +L EQ ++++RQ V+SAT+ L D
Sbjct: 430 VEKGHFEELRSLLKVL--------NSDEQ----------KKQQRQNFVYSATLTLVHDLP 471
Query: 414 KKLKHGSLKS-----KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
++ ++ KQ+V+ IE+L E G+ + IVD+T+ A L ES + C
Sbjct: 472 DHMQKRNVGKRPKFVKQTVD--QKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLC 528
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ KD +LYY + H GRTIVFC SI ++ +++L +L + LHA M Q+ RLK
Sbjct: 529 PLDQKDYHLYYFIQRH-PGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLK 586
>gi|239611412|gb|EEQ88399.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ER-3]
Length = 772
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/561 (32%), Positives = 278/561 (49%), Gaps = 75/561 (13%)
Query: 9 TSEHSKKTKPNRR-KRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLE 67
T + S+K+K +R + T GE +D L W L E GF LE
Sbjct: 9 TRDPSRKSKKRQRVEVTGADGEIVGIDQLDWKE----------VALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNL 127
EID + I +P K S+ + +++A ++ S D D DE SG+ E N
Sbjct: 59 EID----GVDIVRPTGNGEVKFKVSRNKVKNTAAKDISSDTKDDADE-WSGISDDEGPND 113
Query: 128 KNETGKKKKKKKKG---------------------KKIKTVEESVAVSNGPDD------A 160
+ K+K+ + +K+K + P D +
Sbjct: 114 EGVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKPEKLKETKLQNNKKATPKDELQSGIS 173
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
E L + E + AW L + + S+ +L+F +PTPIQ ACIPA A G DV+G A
Sbjct: 174 FEALNEDDEEEVDVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA-AGHDVVGKA 232
Query: 221 ETGSGKTLAFGLPIMQRLLEERE----KAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
TGSGKTLAFG+PI++ LE R + K LE G++ ALI++PTREL
Sbjct: 233 STGSGKTLAFGIPILEYYLETRHDEPSQQHKDLESVGKDP---------IALILSPTREL 283
Query: 277 ALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
A Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++S G
Sbjct: 284 AHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVISTGH 342
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L + F V+DEADR++ GHF+E++ I+ L + ++ + + + T + +
Sbjct: 343 GLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTDDASK 402
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGS-------LKSKQSVNGLNSIETLSERAGMRANV 446
+RQTLVFSAT ++KL S L +KQS+ L SE
Sbjct: 403 APRRQTLVFSAT--FHKGLQQKLAGKSRFFDGDLLDNKQSMEYLLKKLNFSED-----KP 455
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
+D+ + +A L+E +EC +KD YLY ++ H + RT+VF SI+A+R +++ L
Sbjct: 456 KFIDVNPVAQMAENLKEGLVECPAMEKDLYLYTLMLYHPKHRTLVFTNSISAVRRLTAFL 515
Query: 507 KILGIDVWTLHAQMQQRARLK 527
+ L + LH+ M Q+ARL+
Sbjct: 516 QNLNLPALALHSSMAQKARLR 536
>gi|195123017|ref|XP_002006006.1| GI18782 [Drosophila mojavensis]
gi|193911074|gb|EDW09941.1| GI18782 [Drosophila mojavensis]
Length = 819
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 213/397 (53%), Gaps = 68/397 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ + + +M+++ L ++ PT IQ +PAA H KD++GAAETGSGKTLAFG+PI+
Sbjct: 213 WHGMGVPEPIMRALAELGYEAPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIPILS 272
Query: 237 RLLEERE--------KAAKML---------------------------------EDKGEE 255
++E ++ KA K+ E+ E
Sbjct: 273 GIMELKQRNDDSGIRKAPKVKGAQGPVEEAPPTKDNHELTPSPEELDYVSGASDEESDNE 332
Query: 256 AEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARP 315
+ A + L A+++TPTRELA+QV +HL AK + V I GG+S KQER+L+ P
Sbjct: 333 HDPEAKQRPLYAVVLTPTRELAVQVKNHLVSAAKYTGINVAAIFGGLSVAKQERVLRQCP 392
Query: 316 EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
E+VV TPGRLWEL + G HL ++ +SF +DE DRM+E GHF EL+S++ +L
Sbjct: 393 EIVVATPGRLWELYAQGNSHLSKIENVSFLCIDETDRMVEKGHFEELRSLLKVL------ 446
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS-----KQSVNGL 430
++K RQ VFSAT+ L D + ++ +L KQ+V+
Sbjct: 447 ------------NADEERKKLRQNFVFSATLTLVHDLPEHMQKRNLAKRPKFIKQTVD-- 492
Query: 431 NSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTI 490
IE+L E G+ + IVD+T+ A L ES + C ++KD YLYY + H GRTI
Sbjct: 493 QKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLCAIDEKDYYLYYFVQRH-PGRTI 550
Query: 491 VFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
VFC SI ++ +++L +L + LHA M Q+ RLK
Sbjct: 551 VFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLK 587
>gi|327348577|gb|EGE77434.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ATCC
18188]
Length = 772
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 180/565 (31%), Positives = 273/565 (48%), Gaps = 83/565 (14%)
Query: 9 TSEHSKKTKPNRR-KRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLE 67
T + S+K+K +R + T GE +D L W L E GF LE
Sbjct: 9 TRDPSRKSKKRQRVEVTGADGEIVGIDQLDWKE----------VALPDRLEDAEGFFGLE 58
Query: 68 EIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNL 127
EID + I +P K S+ + +++A ++ S D D DE SG+ E N
Sbjct: 59 EID----GVDIVRPTGNGEVKFKISRNKVKNTAAKDISSDTKDDADE-WSGISDDEGPND 113
Query: 128 KNETGKKKKK-----------------------------------KKKGKKIKTVEESVA 152
+ K+K+ KK ++ ++
Sbjct: 114 EGVDDVKEKQTQADKTEKRKEKKKKKQEKAQNKKTEKLKETKLQNNKKATPKDELQSGIS 173
Query: 153 VSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
+D EEE+ + AW L + + S+ +L+F +PTPIQ ACIPA A
Sbjct: 174 FEALNEDDEEEV--------DVSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIPAIA-A 224
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
G DV+G A TGSGKTLAFG+PI++ LE R E A K ALI++P
Sbjct: 225 GHDVVGKASTGSGKTLAFGIPILEYYLETRHDEPSQQHKDPESAGKDPI-----ALILSP 279
Query: 273 TRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
TRELA Q+ H+ + A IN R+ + GG+S +KQ+RLL A ++VVGTPGRLW+++
Sbjct: 280 TRELAHQLAKHITALCTNAPNINARIALLTGGLSVQKQQRLL-ANADIVVGTPGRLWDVI 338
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV 389
S G L + F V+DEADR++ GHF+E++ I+ L + ++ + + + T
Sbjct: 339 STGHGLLRRFQNIKFLVVDEADRLLSEGHFKEVEEIVTALDLKETNDGIEEPASHSESTD 398
Query: 390 SSLQRKKRQTLVFSATIALSADFRKKLKHGS-------LKSKQSVNGLNSIETLSERAGM 442
+ + +RQTLVFSAT ++KL S L +KQS+ L SE
Sbjct: 399 DASKAPRRQTLVFSAT--FHKGLQQKLAGKSRFFDGDLLDNKQSMEYLLKKLNFSED--- 453
Query: 443 RANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
+D+ + +A L+E +EC +KD YLY ++ H + RT+VF SI+A+R +
Sbjct: 454 --KPKFIDVNPVAQMAENLKEGLVECPAMEKDLYLYTLMLYHPKHRTLVFTNSISAVRRL 511
Query: 503 SSLLKILGIDVWTLHAQMQQRARLK 527
++ L+ L + LH+ M Q+ARL+
Sbjct: 512 TAFLQNLNLPALALHSSMAQKARLR 536
>gi|332028699|gb|EGI68731.1| ATP-dependent RNA helicase DDX24 [Acromyrmex echinatior]
Length = 743
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 209/394 (53%), Gaps = 57/394 (14%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
N A+I+ E AW + + ++K++ F PT IQ +PAA +D++GAAETGSG
Sbjct: 136 NLAKINAE--AWRSMGVPTAVIKALADQNFHSPTMIQTQTLPAAILGRRDILGAAETGSG 193
Query: 226 KTLAFGLPIMQRLLE-------------------------EREKAAKMLEDKGEEAEKYA 260
KTLAFG+PI++ +L+ E + ++ DK +
Sbjct: 194 KTLAFGIPIIKGILDLKNQNKDQNSEKDTEESDSENIVLSEFDNCVNIVNDKKLDDCHNI 253
Query: 261 PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
P L ALI+TPTRELA+Q+ +HL AK ++++ ++GGM+ KQER+L PE+V+
Sbjct: 254 PTKPLYALILTPTRELAMQIKNHLTQAAKYTDIKIAVVLGGMAAVKQERILNKGPEIVIA 313
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL D+L N
Sbjct: 314 TPGRLWELIQEGNSHLNQIDSIRYLAIDETDRMMEKGHFQELH---DLLEKMNA------ 364
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGSLKSKQSVNGLNSIET 435
+ +KRQT VFSAT+ + D RKK ++ ++ + L +
Sbjct: 365 ---------DPAKMQKRQTFVFSATLTMVHDLPDYLDRKKKRY----ARSKICKLTPDQK 411
Query: 436 LSERAGMR--ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFC 493
L + + N +VDLT A+ L E I C + KD YLYY L H GRT+VFC
Sbjct: 412 LQKIIQLLKIKNPKVVDLTKESGTADNLTECRIACTIDHKDYYLYYFLKRHN-GRTLVFC 470
Query: 494 TSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
SI ++ +++L IL LHA MQQR RLK
Sbjct: 471 NSIGCVKRLATLFNILKCKPLPLHANMQQRQRLK 504
>gi|392589213|gb|EIW78544.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 740
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/415 (37%), Positives = 215/415 (51%), Gaps = 75/415 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+W +LHP L++ ++ FK PTPIQ +P A GKD++G AETGSGKTLA+GLPI+
Sbjct: 134 SWRPFKLHPHLLQVLHSKNFKSPTPIQSNSLPKAI-AGKDIVGVAETGSGKTLAYGLPIL 192
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--- 292
Q +L E + K LRAL+ITPTRELALQV DHL A+ I
Sbjct: 193 QHILTSPRPVL--------STESGSSKRQLRALVITPTRELALQVADHLNIFARAIADAA 244
Query: 293 -----------------------------------VRVVPIVGGMSTEKQERLLKARPEV 317
V + IVGGMS +KQ RLL EV
Sbjct: 245 VKREEGDEPDLSAPSKKKKSNGKPSDNEAGSGPPLVSIAAIVGGMSAQKQRRLLDRGIEV 304
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML-------- 369
++ TPGRLW++++ E ++ L F VLDEADRMIE GHF EL +I+ +
Sbjct: 305 MIATPGRLWDVLAEDEDLARQVSALDFLVLDEADRMIETGHFAELDNILRLTIRQSEEDQ 364
Query: 370 --PMTNG---SNKGQSEQTQNCVTVSSL--------QRKKRQTLVFSATIALSADFRKKL 416
P G ++G ++Q+ N TV+ Q +T VFSAT LS D ++ L
Sbjct: 365 IEPEHEGGSSGDEGDNDQSGNAGTVAGATPSIAGTNQENGMRTYVFSAT--LSKDLQQNL 422
Query: 417 K---HGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEED 472
K + K ++++ L R R I+DL+ + + L+ES IEC D
Sbjct: 423 KKRRRPKVGKKAKQKPASTLDDLVLRLDFRDPEPEIIDLSPQGGVVSSLKESKIECLVTD 482
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
KD YLYY L + GRT+VF +SI +R ++ L+++LG+ + LH+Q++QR RLK
Sbjct: 483 KDVYLYYFL-LRYPGRTLVFLSSIDGIRRLAPLMELLGLPAYPLHSQLEQRQRLK 536
>gi|241253045|ref|XP_002403786.1| RNA helicase, putative [Ixodes scapularis]
gi|215496560|gb|EEC06200.1| RNA helicase, putative [Ixodes scapularis]
Length = 463
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 193/356 (54%), Gaps = 58/356 (16%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW + ++K++ L F +PTPIQ +P+A DV+GAAETGSGKTLAFG+
Sbjct: 59 DMSAWLNCYVPEPVLKALAELNFTQPTPIQAQTLPSAIRDHMDVMGAAETGSGKTLAFGI 118
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+ + E++ + P L+AL++TPTRELA+QV HL+ AK
Sbjct: 119 PILHHIAEQKARIGD------------GPMS-LQALVLTPTRELAIQVKQHLQSAAKYTG 165
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VV ++GG+S +KQ RLLK RPE+VV TPGRLWEL+ HL ++ + + V+DEADR
Sbjct: 166 IGVVNVIGGLSADKQLRLLKRRPEIVVATPGRLWELVDQNTPHLSDVSNVRYLVIDEADR 225
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E GHF +L ++ ++ N + + K+RQ VFSAT+ +
Sbjct: 226 MVEKGHFEDLTRLLALM------NADRVDGA-----------KRRQNFVFSATLTMQ--- 265
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE-E 471
L G+ A +VDLT A L ES I C E
Sbjct: 266 -----------------------LMRIIGVSAKPKVVDLTRKLGTAESLRESRIVCSSIE 302
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DKD+ LYY L H GRT+VFC SI ++R + S+L +L LHAQMQQR RLK
Sbjct: 303 DKDSRLYYFLLAH-PGRTLVFCNSIDSVRRLVSVLDLLQCSPLPLHAQMQQRQRLK 357
>gi|322795046|gb|EFZ17894.1| hypothetical protein SINV_04950 [Solenopsis invicta]
Length = 736
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 209/386 (54%), Gaps = 47/386 (12%)
Query: 168 AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKT 227
AEI+ AW+ + + ++K++ F PT IQ +PAA +D++GAAETGSGKT
Sbjct: 135 AEIN--IGAWSSMGVPAAVIKALADQNFHSPTMIQAQTLPAAILGRRDILGAAETGSGKT 192
Query: 228 LAFGLPIMQRLLEEREK------AAKMLEDKGEEAEKYA-----------------PKGH 264
LAFG+PI++ +L+ + + K + + E E + P
Sbjct: 193 LAFGIPIIKGILDLKSQNDGQNCPVKEIGETDSENEDLSQNCVNVVNNAKLDDHNTPIKP 252
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
ALI+TPTRELA+Q+ +HL AK ++++ ++GGM+ KQER+L PE+V+ TPGR
Sbjct: 253 FYALILTPTRELAVQIKNHLTQAAKYTDIKIAIVLGGMAAVKQERILNKGPEIVIATPGR 312
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LWEL+ G HL ++ ++ + +DE DRM+E GHF+EL I++ +
Sbjct: 313 LWELIEEGNSHLNQIDSVRYLAIDETDRMMEKGHFQELHDILEKM--------------- 357
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKL-KHGSLKSKQSVNGLNSIETLSERAGMR 443
+ +RKKRQT VFSAT+ + D L K ++ + L S + L + +
Sbjct: 358 ---NANPEKRKKRQTFVFSATLTMVHDLPDYLDKKKKRYARSKICKLTSDQKLQKIIQLL 414
Query: 444 --ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
N +VDLT +A+ L E I C + KD YLYY L H GRT+VFC SI ++
Sbjct: 415 KIKNPKVVDLTKQSGMADNLTECRIACTIDHKDYYLYYFLKRHN-GRTLVFCNSIGCVKR 473
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLK 527
+++L IL LHA MQQR RLK
Sbjct: 474 LATLFSILECKPLPLHANMQQRQRLK 499
>gi|380015023|ref|XP_003691511.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Apis florea]
Length = 778
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 210/412 (50%), Gaps = 82/412 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L + ++K++ QF +PTPIQ +PAA +D++GAAETGSGKTLAFG+PI+
Sbjct: 146 WQILGVSTPIIKALKDQQFYQPTPIQALTLPAAILGHRDILGAAETGSGKTLAFGIPIIN 205
Query: 237 RLLEEREKAA------------KMLEDKG------------------------------- 253
+LE + K K++E+KG
Sbjct: 206 GILELKNKQCDQLNVKSEKEKNKIIENKGWICSENKIVEIDNSSSESDYEEDIDSVNENS 265
Query: 254 --------------EEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIV 299
E Y K L ALI+TPTRELA+Q+ DHL AK +++++ ++
Sbjct: 266 IGCVRVINNIKFNETNTENYMEKP-LYALILTPTRELAIQIKDHLTKAAKYVDIKIAVVL 324
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 359
GGM+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + V+DE DRM+E GHF
Sbjct: 325 GGMAAVKQERILSKGPEIVIATPGRLWELIQYGNSHLCKVDSIKYLVIDETDRMLEKGHF 384
Query: 360 RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 419
+ELQ +++ + + + ++RQT VFSAT+ + D + L
Sbjct: 385 QELQQLLEK------------------INTNEKRLRERQTFVFSATLTMVHDIPEYLXKK 426
Query: 420 SLKSKQSVNGL----NSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
K +S +E + E G++ N I+DLT + L E I C + KD
Sbjct: 427 KRKHIKSKIKKLTPDQKLEKIMELVGIK-NPKIIDLTKKSGITANLTECRIACTIDHKDY 485
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YLYY L + GRT+VFC SI ++ +S+L IL LHA MQQR RLK
Sbjct: 486 YLYYFLKRYT-GRTLVFCNSIGCVKRLSTLFGILDCKPLPLHASMQQRQRLK 536
>gi|395503712|ref|XP_003756207.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sarcophilus harrisii]
Length = 800
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 209/399 (52%), Gaps = 67/399 (16%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 203 DVSAWKDLFVPEPVLRALSSLGFSAPTPIQALALAPAIRDNLDILGAAETGSGKTLAFAI 262
Query: 233 PIMQRLL---EEREKAAKMLEDKGE----------------------------------- 254
P++ +L EE+E+A ED GE
Sbjct: 263 PMIHSVLRWQEEQEQAGGHSED-GESLGDANGSSDDGNEEKDGDPSHSPSDEKESADIEL 321
Query: 255 EAEKYAPKGH------LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
E E+ P GH L L++TPTRELA+QV H+ VAK ++ +VGGM+ +KQ+
Sbjct: 322 ELEEEKPTGHSNRSSPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKTALLVGGMAPQKQQ 381
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+V+ TPGRLWEL+ +HL L L V+DEADRM+E GHF EL +++M
Sbjct: 382 RMLTRRPEIVIATPGRLWELIKEQHQHLSNLRQLRCLVIDEADRMVERGHFTELTQLLEM 441
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q +RQT VFSAT+ L ++ K+ + ++
Sbjct: 442 L------NDSQY-------------NPQRQTFVFSATLTLVHQAPARVFQK--KNAKKID 480
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
L ++ L ++ GMR ++DLT L E+ I C +E+KD YLYY L + GR
Sbjct: 481 KLGKLDMLMQKIGMRGKPKVIDLTRKEATVETLTETKIHCDKEEKDFYLYYFL-LQYPGR 539
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T+VF SI ++ +++LL IL + LHA M Q+ RLK
Sbjct: 540 TMVFANSIDCIKRLTALLSILEQEPLPLHANMHQKQRLK 578
>gi|158289761|ref|XP_311419.4| AGAP010702-PA [Anopheles gambiae str. PEST]
gi|157018482|gb|EAA07044.4| AGAP010702-PA [Anopheles gambiae str. PEST]
Length = 739
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 230/436 (52%), Gaps = 50/436 (11%)
Query: 131 TGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSI 190
T +K+ + K ++++ + N ++ V E + ++ AW +L + +++++
Sbjct: 162 TTQKEPEPPKSSSSTKLQQNQSKQNNATKVSDKPVPEPYSTADYTAWVQLGVSEPIVRAL 221
Query: 191 YRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE---------- 240
FK PT IQ +P A + +D++GAAETGSGKTLAFG+P+++ ++
Sbjct: 222 ADKGFKVPTEIQNKSLPVAIYGRRDLLGAAETGSGKTLAFGIPMLEGIMHLKKGKKPVAD 281
Query: 241 -----EREKAAKMLEDKGEEAEKYAPKGH-------------LRALIITPTRELALQVTD 282
E ++ +E E+A+ +A +G L LI+TPTRELA+Q+ D
Sbjct: 282 DSSEHEMTPPSEDMEVTEEDAKVFAEEGRKLGNSSAAPEDKPLYGLILTPTRELAVQIND 341
Query: 283 HLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
HLK VAK ++ + + GG++T KQER+L+ PE+V+ TPGRLWEL+ HL ++ +
Sbjct: 342 HLKAVAKYTDINIATVFGGLATVKQERMLRKCPEIVIATPGRLWELVKSENHHLSKVTDI 401
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVF 402
+ V+DE DRM+E GHF EL+ ++L + N + + +K R+ +F
Sbjct: 402 RYLVIDETDRMLEKGHFEELK---ELLALINANEEA---------------KKLRRNYIF 443
Query: 403 SATIALSADFRKKLKHGSLKSKQSVNGL--NSIETLSERAGMRANVAIVDLTNMCVLANK 460
SAT+ + + +K KSK+++ + L E GM + IVDLT A
Sbjct: 444 SATLTMDHEMPTHIKRHPKKSKKALKLTPGQRMANLIETIGM-TDPKIVDLTQDHGTART 502
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
L ES I C+ E KD YLYY L H GRT+VFC SI ++ + SL L +L M
Sbjct: 503 LTESRILCQMEHKDFYLYYFLDRHP-GRTLVFCNSIDCVKRLVSLFDYLNCQPLSLFGSM 561
Query: 521 QQRARLKLFSQMITWI 536
QQR RLK ++ +
Sbjct: 562 QQRQRLKNLERLTVLL 577
>gi|307190840|gb|EFN74688.1| ATP-dependent RNA helicase DDX24 [Camponotus floridanus]
Length = 739
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 211/396 (53%), Gaps = 65/396 (16%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+AW+ + + ++K++ F PT IQ +PAA +D++GAAETGSGKTLAFG+P
Sbjct: 134 VEAWSSMGVPTSIIKALADQNFHSPTAIQAQTLPAAILGRRDILGAAETGSGKTLAFGIP 193
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGH----------------------------- 264
I++ +L +++ +M EE+ K+ KG
Sbjct: 194 IIKGILHLKKQQLEM--SMSEESTKHKNKGSSSEIEARENEDISESENCVHVVNNIKLDN 251
Query: 265 --------LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPE 316
L ALI+TPTRELA+Q+ +HL AK ++++ ++GGM+ KQER+L PE
Sbjct: 252 CQNISIKPLYALILTPTRELAIQIKNHLTQAAKYTDIKIAVVLGGMAAVKQERILSKGPE 311
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL D+L N
Sbjct: 312 IVIATPGRLWELIQDGNSHLNQIDSIRYLAIDETDRMMEKGHFQEL---YDLLEKMNA-- 366
Query: 377 KGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF-----RKKLKHGSLKSKQSVNGLN 431
+ ++ +KRQT VFSAT+ + D RKK ++ K + G
Sbjct: 367 -------------NPVKLEKRQTFVFSATLTMVHDIPDYLERKKKRYARSKIYKLTPG-Q 412
Query: 432 SIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
++ + ++ N +VDLT +A+ L E I C + KD YLYY L H GRT+V
Sbjct: 413 KLQKIIHLLKIK-NPKVVDLTKESGMADNLTECRIACTIDHKDYYLYYFLKKHN-GRTLV 470
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
FC SI ++ +S+L IL LHA MQQR RLK
Sbjct: 471 FCNSIGCVKRLSTLFSILECKPLPLHASMQQRQRLK 506
>gi|452989521|gb|EME89276.1| hypothetical protein MYCFIDRAFT_185631 [Pseudocercospora fijiensis
CIRAD86]
Length = 723
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 275/537 (51%), Gaps = 79/537 (14%)
Query: 16 TKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYN 75
+PN++ R K DSL W + D + GF LEEID+
Sbjct: 13 ARPNKKPRIVKA------DSLPWKAVSLPDRMDDYE----------GFFGLEEIDDVDV- 55
Query: 76 LQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDG----DEDGSGVQKQEEKNLKNET 131
K ++ L SK+ + + + S D D D ++DG + Q
Sbjct: 56 ----KRDEATGKVSLWSKEDQTALTADHASADSDADSWSGFEDDGPEIPVQ--------- 102
Query: 132 GKKKKKKKKGKKIKTVEESVAVSNGPDDAEEEL----VNEAEISTEFDAWNELRLHPLLM 187
K K+ + K+KT ++ + G D+ NE T+ AW L+L P M
Sbjct: 103 --KSAKQNQPSKVKTAKKQ-DIHEGDDNPPSAFSVLAANEDAADTDVSAWMPLKLSPDTM 159
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE---EREK 244
S+ +L+F PTPIQ+A IP G DVIG A TGSGKTLAFG+PI++R LE EREK
Sbjct: 160 ASLSKLKFSNPTPIQEAAIPKI-FAGHDVIGKASTGSGKTLAFGIPILERFLEKISEREK 218
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR---VVPIVGG 301
E+ P ALI++PTRELA Q+ HL + G++ + + + GG
Sbjct: 219 L-----------EQSTPI----ALILSPTRELAHQLNSHLAALFDGLDAKKPTIATLTGG 263
Query: 302 MSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 361
+S +KQ+RLL+ +VV+GTPGRLWE++ G+ L + F V+DEADR++ GHF+E
Sbjct: 264 LSLQKQQRLLR-DADVVIGTPGRLWEVIGSGKGVAAALKQIEFLVVDEADRLLSEGHFKE 322
Query: 362 LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR--KKRQTLVFSATIALSADFRKKLKHG 419
++ I++ L + Q E+ Q S + K+RQTLVFSAT +KKL G
Sbjct: 323 VEEILNAL-----DREDQDEEHQEVPDSSHAVKSPKERQTLVFSAT--FDRGLQKKLV-G 374
Query: 420 SLKSKQS-VNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKEEDKDAYL 477
+ SK+ ++ ++E L + R ++ +D+ + LA L+E IEC +KD YL
Sbjct: 375 KISSKRDLLHNKEAMEYLMSKLNFREDIPQFIDVNPVNQLATGLKEGLIECSGTEKDLYL 434
Query: 478 YYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK---LFSQ 531
Y +L + R +VF SI+A+R I+ LL+ L ++ LH+ M Q+ARL+ FSQ
Sbjct: 435 YTLLLLSSTKRAMVFTNSISAVRRIAPLLQNLNVNALALHSGMAQKARLRSVERFSQ 491
>gi|299742573|ref|XP_001832577.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
gi|298405246|gb|EAU89326.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
Length = 759
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 219/414 (52%), Gaps = 61/414 (14%)
Query: 157 PDDAEEELVNEAEISTEFDA------WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
PD+ +E + FD+ W+ L LHP L +SI+ F +PT IQK IP A
Sbjct: 128 PDEDSDESADSEPEKEPFDSETLLPEWHPLGLHPRLTRSIHARNFSKPTEIQKEAIPLAL 187
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
QG+DV+G A+TGSGKTLA+GLPI+ LL ++ ++K + LRALI+
Sbjct: 188 -QGRDVVGVAQTGSGKTLAYGLPILHTLLNQKRPSSKR-------------RRPLRALIL 233
Query: 271 TPTRELALQVTDHLKGVAKGI------------------NVRVVPIVGGMSTEKQERLLK 312
PTRELALQV+ HL + I +V V IVGGMS +KQ+R+L
Sbjct: 234 APTRELALQVSQHLTDTLRAIEPQEDEGDEKKQAVKPPPHVSVAAIVGGMSAQKQKRVLD 293
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII------ 366
+V++ TPGRLW+++S + E+ L F VLDEADRMIE GHF EL +I+
Sbjct: 294 RGVDVLIATPGRLWDIVSTDDNLANEIRNLRFLVLDEADRMIETGHFAELDNILRLTLRE 353
Query: 367 ---DMLPMTNGSNKGQSEQTQ-----NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 418
D +P + + K + E T + S+ + QT VFSAT LS D ++ LK
Sbjct: 354 SSEDEIPGID-NEKSEDEDTNMDDKADDKPSSAQKGTDLQTFVFSAT--LSKDLQRNLKR 410
Query: 419 -----GSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
G K K+ + L ++DL+ + + L+E + C DK
Sbjct: 411 RKRSSGFSKKKKREPSSTLDDLLLRLDFRDPEPEVIDLSPKGGVVSTLQEGRVNCLTADK 470
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
D YL+Y L H GRT+VF +SI +R ++ LL++L + + LH+QM+QR RLK
Sbjct: 471 DVYLFYFLLRH-PGRTLVFLSSIDGIRRLNPLLELLNVKAFPLHSQMEQRQRLK 523
>gi|384247532|gb|EIE21018.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 460
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 201/366 (54%), Gaps = 77/366 (21%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
V+ A++S AW L L P ++ +I L F EPTPIQ+ C+ A +DVIGAA+TGS
Sbjct: 35 VSAADVS----AWEGLGLGPGVLGAIGGLGFGEPTPIQRECLLPAIRDRRDVIGAAQTGS 90
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAFGLPI+Q KG + G LRALI+ PTRELA+QV++HL
Sbjct: 91 GKTLAFGLPILQL--------------KGRKG-----GGLLRALILAPTRELAMQVSEHL 131
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
+ VAK + V V PIVGG+S KQ RLL RP +VV TPGRLWELM GE HL +L LSF
Sbjct: 132 QAVAKPVGVWVAPIVGGISPPKQARLLGRRPAIVVATPGRLWELMRLGEPHLADLTGLSF 191
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
VLDEADRM++ GHF+EL I A
Sbjct: 192 LVLDEADRMVQQGHFQELTCI--------------------------------------A 213
Query: 405 TIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK---L 461
A AD L H S SK++ TL +R R IVDLT+ LA+K L
Sbjct: 214 HEACPAD----LLHASFASKET--------TLMDRMPFRPKPKIVDLTSERKLADKARSL 261
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
EE++D LYY+L+ H GRT+VF +++ R +++LLK+L + LHA MQ
Sbjct: 262 LTFAAPLSEEERDEVLYYLLAAH-PGRTLVFVNAVSTARRVAALLKLLKMPSSALHAGMQ 320
Query: 522 QRARLK 527
QRARLK
Sbjct: 321 QRARLK 326
>gi|225679099|gb|EEH17383.1| ATP-dependent RNA helicase mak5 [Paracoccidioides brasiliensis
Pb03]
Length = 772
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 267/507 (52%), Gaps = 59/507 (11%)
Query: 62 GFLSLEEIDEASYNLQIPKPE-----KGKPGKKLNSKKRKRS-SANEEDSGD-----GDG 110
GF LEEI+ + I +P K K K K RS S+N ED D D
Sbjct: 53 GFFGLEEIE----GVDIVRPAGQGQIKFKAAKNKVKKIADRSISSNAEDEADEWSRFSDS 108
Query: 111 DG---------DEDGSGVQKQEEK----------NLKNETGKKKKKKKKGKKIKTVEESV 151
G +++G +QK E + + +E +KK+ K K K K ++
Sbjct: 109 AGPGQDVEYVYNDEGKQIQKDETREKKKVKKSNKDRADEPREKKRLKLKEAKGKNNKKHA 168
Query: 152 AVSNGPDDAEEELVNEAEISTEFD--AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
++ + +NE + + D AW L + L S+ +L+F +PTPIQ ACIP
Sbjct: 169 PRTDVQPGMSFDSLNEEDDQEDVDVSAWEPLGISAELQTSLAKLKFAKPTPIQSACIPVI 228
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
A G DV+G A TGSGKTLAFG+PI++ LE + +++ G ++ + P ALI
Sbjct: 229 A-AGHDVVGKAPTGSGKTLAFGIPILEYHLENNRD--EPIQNTGSDSSRKHPI----ALI 281
Query: 270 ITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLW 326
++PTRELA Q++ HL A IN R+ + GG+S +KQ RLL A ++V+GTPGRLW
Sbjct: 282 LSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQKQHRLL-ANADIVIGTPGRLW 340
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+++S G+ + + ++ F V+DEADR++ GHF+E++ I+ L ++ + + +
Sbjct: 341 DVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEILTALDRKEINDGVEESDSDSE 400
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-----LNSIETLSERAG 441
++++ RQTLVFSAT F + L+ + ++G S+E L E+
Sbjct: 401 SERANIKSFPRQTLVFSAT------FHRGLQQKLAGKSRFIDGGLLDNKQSMEYLLEKLN 454
Query: 442 MR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
R +D+ + +A L+E +EC +KD YLY ++ H RT+VF SI+A+R
Sbjct: 455 FREEKPKFIDVNPVSQMAENLKEGLVECPAMEKDLYLYTLMLYHLNYRTLVFTNSISAVR 514
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLK 527
++S L+ L + +LH+ M Q+ARL+
Sbjct: 515 RLTSFLQNLNLPALSLHSSMAQKARLR 541
>gi|156550634|ref|XP_001604682.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Nasonia
vitripennis]
Length = 636
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 211/412 (51%), Gaps = 73/412 (17%)
Query: 170 ISTEFD-AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
+STE + W+ L + ++ +++ F PT IQ +P A +D++GAAETGSGKTL
Sbjct: 2 VSTEHNEGWSTLGVPSVITEALVEQNFYSPTAIQALALPPAILGRRDILGAAETGSGKTL 61
Query: 229 AFGLPIMQRLLEEREKAAKMLE---------DKGEEA----------------------- 256
AFG+P++ +LE ++K K ++ +K EEA
Sbjct: 62 AFGIPVLNGILELQKKEGKTVQSTSGKFREVNKDEEAASDISDNEGDENDEPMPEEQSID 121
Query: 257 ------------------EKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPI 298
+ P L ALI+TPTRELA+Q+ DHL AK ++++ +
Sbjct: 122 KNGIGLVKVVNNVKFDEFDNVKPTKPLYALILTPTRELAIQIKDHLTKAAKYTDIKIAVV 181
Query: 299 VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 358
VGGM+ KQER+L PE+V+ TPGRLWEL+ G HL +L ++ + V+DE DRM+E GH
Sbjct: 182 VGGMAAVKQERILSKGPEIVIATPGRLWELIDEGNPHLSQLPSVKYLVIDETDRMLEKGH 241
Query: 359 FRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 418
F EL II+ + N +S + K+RQT VFSAT+ L D L+
Sbjct: 242 FLELHDIIERI------NSVES------------KVKRRQTFVFSATLTLVHDIPDYLQR 283
Query: 419 GSLK-SKQSVNGLNSIETLSERAGMR--ANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
++ SK + L + L + M N I+D+T A L E I C + KD
Sbjct: 284 KKIRNSKSKIFKLTPGQKLQKVIDMLKVKNPKIIDVTKDTGTARNLTECRIACTIDHKDY 343
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YLYY L H GRT+VFC SI ++ +++L IL LHA M QR RLK
Sbjct: 344 YLYYFLKRHS-GRTLVFCNSIGCVKRLATLFGILECKPLPLHASMPQRQRLK 394
>gi|383856439|ref|XP_003703716.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Megachile
rotundata]
Length = 770
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 209/410 (50%), Gaps = 81/410 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L+ ++K++ QF PTPIQ +P A +D++GAAETGSGKTLAFG+PI+
Sbjct: 146 WGRLGLYAPIIKAMKDQQFHTPTPIQALTLPPAIMGYRDILGAAETGSGKTLAFGIPIIN 205
Query: 237 RLLEEREK------------AAKMLEDKG------------------------------- 253
+LE + + +E+KG
Sbjct: 206 GILELKNRQVDKSDIKPINGTGNNIENKGWICSDNEMKDDDSSSETDHEEDIDDVNENNI 265
Query: 254 -----------EEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGM 302
E E Y K L ALI+TPTRELA+Q+ DHL AK ++++ ++GG+
Sbjct: 266 GCIRVIDKVKINEDEHYVKKP-LYALILTPTRELAIQIKDHLTKAAKYTDIKIAVLLGGL 324
Query: 303 STEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 362
+ KQER+L PE+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+EL
Sbjct: 325 AAVKQERILSKGPEIVIATPGRLWELIQQGNPHLNQVDSIKYLAIDETDRMLEKGHFQEL 384
Query: 363 QSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK----- 417
Q +++ + ++ +R++RQ VFSAT+ + D L+
Sbjct: 385 QQLLEK------------------ININKKKREERQNFVFSATLTMVHDIPDYLQKKKKK 426
Query: 418 HGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYL 477
H S K + G ++ + + GM+ +VD+T A+ L E I C + KD YL
Sbjct: 427 HNSSKIFKLTPG-QKLQKIIQLVGMKT-PKVVDVTRESGTASNLTECKIACTIDHKDYYL 484
Query: 478 YYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YY L H GRT+VFC SI ++ +++L IL LHA MQQR RLK
Sbjct: 485 YYFLKRHA-GRTLVFCNSIGCVKRLATLFGILDCKPLPLHASMQQRQRLK 533
>gi|226288117|gb|EEH43630.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides brasiliensis
Pb18]
Length = 772
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 265/507 (52%), Gaps = 59/507 (11%)
Query: 62 GFLSLEEIDEASYNLQIPKPE-----KGKPGKKLNSKKRKRS-SANEEDSGD-------- 107
GF LEEI+ + I +P K K K K RS S+N ED D
Sbjct: 53 GFFGLEEIE----GVDIVRPAGQGQIKFKAAKNKVKKTADRSISSNAEDEADEWSRFSDS 108
Query: 108 -GDGDGDED-----GSGVQKQEEK----------NLKNETGKKKKKKKKGKKIKTVEESV 151
G G ED G +QK E + + +E +KK+ K K K K ++
Sbjct: 109 AGPGQDVEDVYNDEGKQIQKDETREKKKVKKSNKDRADEPREKKRLKLKEAKGKNNKKHA 168
Query: 152 AVSNGPDDAEEELVNEAEISTEFD--AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
++ + +NE + + D AW L + L S+ +L+F +PTPIQ ACIP
Sbjct: 169 PRTDVQPGMSFDALNEEDDQEDVDVSAWEPLGISAELQTSLAKLKFAKPTPIQSACIPVI 228
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
A G DV+G A TGSGKTLAF +PI++ LE + +++ G ++ + P ALI
Sbjct: 229 A-AGHDVVGKAPTGSGKTLAFVIPILEYHLENNRD--EPIQNTGSDSSRKHPI----ALI 281
Query: 270 ITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLW 326
++PTRELA Q++ HL A IN R+ + GG+S +KQ RLL A ++V+GTPGRLW
Sbjct: 282 LSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQKQHRLL-ANADIVIGTPGRLW 340
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+++S G+ + + ++ F V+DEADR++ GHF+E++ I+ L ++ + + +
Sbjct: 341 DVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEILTALDRKEINDGVEESDSDSE 400
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-----LNSIETLSERAG 441
++++ RQTLVFSAT F + L+ + ++G S+E L E+
Sbjct: 401 SERANIKSFPRQTLVFSAT------FHRGLQQKLAGKSRFIDGGLLDNKESMEYLLEKLN 454
Query: 442 MR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
R +D+ + +A L+E +EC +KD YLY ++ H RT+VF SI+A+R
Sbjct: 455 FREEKPKFIDVNPVSQMAENLKEGLVECPAMEKDLYLYTLMLYHLNYRTLVFTNSISAVR 514
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLK 527
++S L+ L + +LH+ M Q+ARL+
Sbjct: 515 RLTSFLQNLNLPALSLHSSMAQKARLR 541
>gi|195028797|ref|XP_001987262.1| GH20064 [Drosophila grimshawi]
gi|193903262|gb|EDW02129.1| GH20064 [Drosophila grimshawi]
Length = 806
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 213/398 (53%), Gaps = 69/398 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + + +M+++ ++ PT IQ +PAA H KD++GAAETGSGKTLAFG+PI+
Sbjct: 199 WQGMGIPTSIMRALAEQGYEAPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIPILS 258
Query: 237 RLLEE---------REKAAKM------------------LEDKGEE-------------A 256
++E R +A K L EE A
Sbjct: 259 GIMELKQRNDGSGIRTRAPKHKVEATVEAEVPTSKENHELTPPPEELDYVSGASEEESDA 318
Query: 257 EKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
E Y+ G L AL++TPTRELA+QV +HL AK +RV I GG+S KQER+L+
Sbjct: 319 EDYSSSGRRPLYALVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLSVAKQERVLRQC 378
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 374
PE+VV TPGRLWEL + G KHL ++ ++F +DE DRM+E GHF EL+ ++ +L
Sbjct: 379 PEIVVATPGRLWELYAQGNKHLNKIEHVNFLCIDETDRMVEKGHFEELRMLLKVL----- 433
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK-----SKQSVNG 429
E+ Q RQ VFSAT+ L D + ++ +L +KQ+V+
Sbjct: 434 --NAHEERKQ-----------LRQNFVFSATLTLIHDLPEHMQKRNLAKRPKFTKQTVD- 479
Query: 430 LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRT 489
IE+L E G+ + IVD+T+ A L ES + C ++KD YLYY + H GR+
Sbjct: 480 -QKIESLIEELGI-SQPKIVDITSSQQTAQTLTESRLLCAIDEKDYYLYYFVQRH-PGRS 536
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
IVFC SI ++ +++L +L + LHA M Q+ RLK
Sbjct: 537 IVFCNSIDCVKRLATLFGLLECNPLPLHANMIQKQRLK 574
>gi|302510172|ref|XP_003017046.1| hypothetical protein ARB_05340 [Arthroderma benhamiae CBS 112371]
gi|291180616|gb|EFE36401.1| hypothetical protein ARB_05340 [Arthroderma benhamiae CBS 112371]
Length = 746
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 219/378 (57%), Gaps = 35/378 (9%)
Query: 164 LVNEA--EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
++NEA E + AW+ L L P L S+ RL+F +PTPIQKA IP G+DVIG A
Sbjct: 155 VLNEANEEADIDVSAWDSLDLRPELQTSLSRLRFAQPTPIQKATIPEILG-GRDVIGKAA 213
Query: 222 TGSGKTLAFGLPIMQRLL---EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
TGSGKTLAFGLPI+Q LL E+R + L G++ ALI++PTRELA
Sbjct: 214 TGSGKTLAFGLPILQCLLNRQEQRPSTSLALSKSGDKKPI--------ALILSPTRELAH 265
Query: 279 QVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
Q+ HLK V A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S +
Sbjct: 266 QLVKHLKEVTSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQI 324
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L +L ++ F V+DEADR++ GHF+E+ ++ L T S++ E + +
Sbjct: 325 LTKLRSIKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEAPEEEEEPAG---- 380
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSV--NGLN---SIETLSERAGMR-ANVAIV 449
RQTLVFSAT F+K L+ +K S N L+ S+E L ++ R +
Sbjct: 381 -RQTLVFSAT------FQKGLQQKLVKRDHSFHDNLLDKKESMEYLLKKLRFRDEKPRFI 433
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
D+ + +A+ L+E IEC +KD YLY +L + + RT+VF SI+++R ++ L+ L
Sbjct: 434 DVNPVSQMADNLKEGIIECSAMEKDLYLYSVLLFYPKHRTLVFTNSISSVRRLTHFLQNL 493
Query: 510 GIDVWTLHAQMQQRARLK 527
+ +LH+ M Q+ARL+
Sbjct: 494 NLPALSLHSSMAQKARLR 511
>gi|328771868|gb|EGF81907.1| hypothetical protein BATDEDRAFT_10092 [Batrachochytrium
dendrobatidis JAM81]
Length = 529
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 250/490 (51%), Gaps = 81/490 (16%)
Query: 60 DGGFLSLEEIDEASYNLQIPKPEKGKPGKKLN-SKKRKRSSANEEDSGDGDGDGDEDGSG 118
D F SLEEI+ + P E G +N S + S + DS + DE S
Sbjct: 27 DACFFSLEEIEPVDDD---PNAEVGA---TINGSVEDIFPSGIDLDSFIHIDEFDESKSI 80
Query: 119 VQKQEEKNLKNETGKKKKKKKKGKKIK-----TVEESVA----------VSNGPDDAEEE 163
K N K T KK K+ K VE++ A +++ P ++E
Sbjct: 81 APKSN--NQKESTHSTKKLKRISAKDTLGHPFVVEKTTAPNLNDHDTFHITDAPV-SDEP 137
Query: 164 LVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
+V+ ++ ++ W E L+ L++++++L F PT IQ + + KD+IGAAETG
Sbjct: 138 IVDHYKVPSD-SKWLEFGLNLQLVQTLHKLGFSCPTDIQAKSLENTLVRHKDIIGAAETG 196
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDH 283
SGKTLAFGLPI+ L + +K P LIITPTRELA+QV+DH
Sbjct: 197 SGKTLAFGLPILHHLAIQLQKN---------------PNTACIGLIITPTRELAIQVSDH 241
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
LK I ++ PIVGGMS +KQ RL+ +P ++VGTPGRLWEL+ + L L +
Sbjct: 242 LKRAGAAITHKITPIVGGMSLQKQRRLIATKPHIIVGTPGRLWELIQEDPELLDMLKHTT 301
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
+ V+DEADRM+E GHF++L SI+ + + N N Q KR+T+VFS
Sbjct: 302 YLVIDEADRMLEAGHFKDLDSILGCISVCNTDNASQI---------------KRRTMVFS 346
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT+ L+ ++K K ++N + +++++ I A L E
Sbjct: 347 ATM---------LEDDAIKQKATLN-------FKKHNKIKSSLFIT--------AKGLLE 382
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
S I C + +KD LYY+L + +TIVF SI A+R + +L LG+ V+ LHA+MQQR
Sbjct: 383 SKINCLKTEKDTMLYYVLCRY-TAKTIVFVNSIDAIRRLVPILSYLGVQVFGLHAEMQQR 441
Query: 524 ARLKLFSQMI 533
RLK + +
Sbjct: 442 QRLKNLDRFV 451
>gi|170053020|ref|XP_001862485.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
gi|167873707|gb|EDS37090.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
Length = 817
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 147/400 (36%), Positives = 210/400 (52%), Gaps = 66/400 (16%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S ++ W EL + +++++ F++PT IQ +PAA +D++GAAETGSGKTLAF
Sbjct: 217 SADYFKWTELGVSEPIVRALADKGFRQPTEIQTLSLPAAILGKRDLLGAAETGSGKTLAF 276
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKY----------------APKG----------- 263
G+P+++ +++ + K + E AP G
Sbjct: 277 GIPLLEGIMKLKANGGLKTVKKSDAEESREGHELTPEPEELEFYPAPDGGDSVLAAQDLE 336
Query: 264 ---------HLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
L ALI+TPTRELA+Q+ DHLK V K ++++ + GG++ KQER+LK
Sbjct: 337 REKKKDLNKPLYALILTPTRELAVQINDHLKAVTKYTDIQIATVFGGLAVVKQERMLKRC 396
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 374
PE+V+ TPGRLWELM G HL ++ + F V+DE DRM+E GHF EL+ +++ML
Sbjct: 397 PEIVIATPGRLWELMQAGNHHLSKMDQIRFLVIDETDRMLEKGHFDELKQLLEML----- 451
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIE 434
Q+E+ K R+ +FSAT+ L D +H KSK++ + E
Sbjct: 452 ---NQNEEAT----------KLRRNYIFSATLTLDHDLP---EHLKAKSKKNKKLNITKE 495
Query: 435 TLSER-------AGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
T +R GM + +VD+T A L ES I CK E KD YLYY L H G
Sbjct: 496 TTGQRLNNLVQTIGM-TDPKVVDITQQHGTAQTLTESRILCKAEHKDYYLYYFLLRH-PG 553
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
RT+VFC SI ++ + SL L D +L MQQR RLK
Sbjct: 554 RTLVFCNSIDCVKRLVSLFTYLNCDPLSLFGSMQQRQRLK 593
>gi|157119653|ref|XP_001653437.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875246|gb|EAT39471.1| AAEL008728-PA [Aedes aegypti]
Length = 813
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 206/406 (50%), Gaps = 77/406 (18%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E+ W EL + +++++ F+ PT IQ +P A +D++GAAETGSGKTLAFG+
Sbjct: 212 EYFKWTELGVSEPIVRALADKGFQTPTEIQTLSLPVAIMGKRDLLGAAETGSGKTLAFGI 271
Query: 233 PIMQRLL-------------------EEREKAAKMLEDKGEEAEKYAPKGH--------- 264
P+++ ++ EE ++ + EE E Y +
Sbjct: 272 PLLEGIMKLKASEPYRVRKCENASPKEEEQREGHEMTPPPEELEYYPDPSNGDSSVMLQQ 331
Query: 265 -------------LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL 311
L ALI+TPTRELA+Q+ DHLK + K ++++ + GG++ KQER+L
Sbjct: 332 NLEKEEDPQLDKPLYALILTPTRELAVQINDHLKAITKYTDIKIATVFGGLAAVKQERML 391
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
K PE+V+ TPGRLWEL+ HL ++ + F V+DE DRM+E GHF EL+ +++M+
Sbjct: 392 KKCPEIVIATPGRLWELIQARNPHLCKVDEIRFLVIDETDRMLERGHFEELKQLLEMI-- 449
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK------- 424
E T K R+ +FSAT+ + D + L + K+K
Sbjct: 450 -----NNNEEAT-----------KLRRNYIFSATLTMDHDLPEHLVAKAKKNKKIHITKE 493
Query: 425 ---QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL 481
Q +N L I GM N +VD+T A+ L ES I CK E KD YLYY L
Sbjct: 494 TTGQRLNNLVQI------IGM-TNPKVVDITQQHGTAHTLIESRILCKAEQKDYYLYYFL 546
Query: 482 SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
H GRT+VFC SI ++ + SL L D +L MQQR RLK
Sbjct: 547 QRHP-GRTLVFCNSIDCVKRLVSLFGYLNCDPLSLFGSMQQRQRLK 591
>gi|322693567|gb|EFY85423.1| ATP-dependent RNA helicase MAK5 [Metarhizium acridum CQMa 102]
Length = 794
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 235/407 (57%), Gaps = 24/407 (5%)
Query: 129 NETGKKKKKKKKGKKIKTVEESVAVSNGPD------DAEEELVNEAEISTEFDAWNELRL 182
N T KK KK+K G K +++S + G + A+EE N+ + W L L
Sbjct: 166 NGTQKKSKKQKMGDK--KLQKSASHGTGNEFLALAAMADEEAEND---DLDMGDWVALNL 220
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
P L+ +I +L F +PT IQ+ IP G DVIG A+TGSGKTLAFG+PI+++ LE R
Sbjct: 221 SPNLVSAIAKLGFSKPTAIQEKSIPEIIA-GGDVIGKAQTGSGKTLAFGIPIVEKWLEMR 279
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--NVRVVPIVG 300
E+ D+G++ +K +G + A+I++PTRELA Q+ +H+K V G+ + + + G
Sbjct: 280 EEQEDQGGDRGDQPKKKNGEGPM-AVILSPTRELAKQIGEHIKAVCDGLPASPYICVVTG 338
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
G+S +KQ+R L+ ++V+GTPGRLWE++ G K + + F V+DEADR+ + G F+
Sbjct: 339 GLSIQKQQRQLE-EADIVIGTPGRLWEVLDGDAKLQEQFTRIKFLVVDEADRLFKVGQFK 397
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
E ++II L N G S+ + S + ++RQTLVFSAT + + KL G
Sbjct: 398 EAENIIGALDRENPEGHGYSDNSD-----SEDETRERQTLVFSAT--FDKNLQTKLA-GK 449
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
KS ++ + + L + R +D+ + +A+ L E IEC +KD YLY +
Sbjct: 450 GKSAKAGSDEEKMAYLMKCLKFRGEPKFIDVNPVSQMADNLREVLIECGAMEKDLYLYTV 509
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L ++ RT+VF SI+A+R I+ LL+ L + LH+QM Q+ARL+
Sbjct: 510 LLLNPGRRTLVFTNSISAVRRITPLLQHLNQNALPLHSQMIQKARLR 556
>gi|350407757|ref|XP_003488184.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Bombus impatiens]
Length = 757
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 207/395 (52%), Gaps = 64/395 (16%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L + ++K++ QF EPT IQ +P A +D++GAAETGSGKTLAFG+PI+
Sbjct: 145 WYMLGVPTPVIKALKDQQFHEPTAIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIIN 204
Query: 237 RLLEEREKAAK-------------------------MLEDKGEEAEKYAP---------- 261
+LE + K ++ M+E+ +E
Sbjct: 205 GILELKNKQSQQSDMEFGKEITGITKNKGWICSENEMVENDNSSSESDCCVRVINNVKMS 264
Query: 262 -----KGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPE 316
L ALI+TPTRELA+Q+ DHL K +++V ++GGM+ KQER+L PE
Sbjct: 265 KTQNYTKPLYALILTPTRELAIQIKDHLTKAVKYTDIKVAVVLGGMAAVKQERILSKGPE 324
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
+V+ TPGRLWEL+ G HL ++ ++ + +DE DRM+E GHF+ELQ +++ + M N
Sbjct: 325 IVIATPGRLWELIQQGNPHLSKVDSIKYLAIDETDRMLEKGHFQELQQLLEKINM----N 380
Query: 377 KGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK----QSVNGLNS 432
+ + E+ RQT VFSAT+ + D + L+ K Q +
Sbjct: 381 EKKMEE--------------RQTFVFSATLTMVHDIPEYLEKKKRKHTKSKIQKLTPAQK 426
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
++ + E G++ N I+D+T A L E I C + KD YLYY L + GRT+VF
Sbjct: 427 LQKIMELVGIK-NPKIIDVTKKSGTATNLTECRIACTIDHKDYYLYYFLKRYA-GRTLVF 484
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
C SI ++ +++LL IL LHA MQQR RLK
Sbjct: 485 CNSIGCVKRLATLLGILDCKPLPLHASMQQRQRLK 519
>gi|295658672|ref|XP_002789896.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282857|gb|EEH38423.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 771
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 232/412 (56%), Gaps = 34/412 (8%)
Query: 130 ETGKKKKKKKKGKKIKTVEESVAVSNGPD-DAEEELVNEAEISTEFDAWNELRLHPLLMK 188
E + K K+ KGK K S V G DA E ++ ++ + AW L + L
Sbjct: 149 EKKRLKLKEAKGKNNKKHAPSTDVQPGMSFDALNEEDDQEDV--DVSAWEPLGISAELQT 206
Query: 189 SIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKM 248
S+ +L+F +PTPIQ ACIP A G DV+G A TGSGKTLAFG+PI++ LE +
Sbjct: 207 SLAKLKFAKPTPIQSACIPEIA-AGHDVVGKASTGSGKTLAFGIPILEYHLENNRD--EP 263
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTE 305
++ G ++ + P ALI++PTRELA Q++ HL A IN R+ + GG+S +
Sbjct: 264 IQSTGSDSSRKNPI----ALILSPTRELAHQISKHLTAFISNAPNINARIALLTGGLSVQ 319
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
KQ RLL A ++V+GTPGRLW+++S G+ + + ++ F V+DEADR++ GHF+E++ I
Sbjct: 320 KQHRLL-ANADIVIGTPGRLWDVISNGQGLIRKFQSIKFLVVDEADRLLSEGHFKEVEEI 378
Query: 366 IDMLP---MTNGSNKGQSE-QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 421
+ L + +G + S+ +++ T S L RQTLVFSAT F + L+
Sbjct: 379 LTSLDRKEINDGVEEPDSDSESERDNTKSFL----RQTLVFSAT------FHRSLQQKLA 428
Query: 422 KSKQSVNG-----LNSIETLSERAGMRAN-VAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ V+G S+E L E+ R +D+ + +A + E +EC +KD
Sbjct: 429 GKSRFVDGGLLDNKQSMEYLLEKLNFREEKPKFIDVNPVSQMAENIREGLVECPAMEKDL 488
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YLY ++ H RT+VF SI+A+R ++S L+ L + +LH+ M Q+ARL+
Sbjct: 489 YLYTLMLYHLNHRTLVFTNSISAVRRLTSFLQNLNLPALSLHSSMAQKARLR 540
>gi|325096020|gb|EGC49330.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus H88]
Length = 770
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 207/362 (57%), Gaps = 30/362 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L + + S+ +L+F +PTPIQ ACIP A G DV+G A TGSGKTLAFG+PI++
Sbjct: 189 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVGKASTGSGKTLAFGIPILE 247
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINV 293
L+ R + D GE + KY ALI++PTRELA Q++ H+ + A IN
Sbjct: 248 YYLKNRREEPVQHND-GELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPNINA 301
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEADR+
Sbjct: 302 RIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRL 360
Query: 354 IENGHFRELQSIIDMLPMTNGSNK--GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
+ GHF+E++ I+ L +K SE + VS RQTLVFSAT
Sbjct: 361 LSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT------ 409
Query: 412 FRKKLKH-----GSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESF 465
F K L+ G ++ S+E L ++ R + +D+ + +A L+E
Sbjct: 410 FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGL 469
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+EC +KD YLY ++ H Q RT+VF SI+A+R ++ L+ L + LH+ M Q+AR
Sbjct: 470 VECPAMEKDLYLYTLMLYHPQHRTLVFTNSISAVRRLTVFLQNLNLPALALHSSMAQKAR 529
Query: 526 LK 527
L+
Sbjct: 530 LR 531
>gi|302659739|ref|XP_003021557.1| hypothetical protein TRV_04404 [Trichophyton verrucosum HKI 0517]
gi|291185460|gb|EFE40939.1| hypothetical protein TRV_04404 [Trichophyton verrucosum HKI 0517]
Length = 746
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 217/378 (57%), Gaps = 35/378 (9%)
Query: 164 LVNEA--EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
++NEA E + AW+ L L P L S+ R +F +PTPIQKA IP G+DVIG A
Sbjct: 155 VLNEANDEADVDVSAWDSLDLRPELQTSLSRFKFAQPTPIQKATIPEILG-GRDVIGKAA 213
Query: 222 TGSGKTLAFGLPIMQRLL---EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
TGSGKTLAFGLPI+Q LL E+R + L G++ ALI++PTRELA
Sbjct: 214 TGSGKTLAFGLPILQYLLNRQEQRPSTSLTLSKSGDKKPV--------ALILSPTRELAH 265
Query: 279 QVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
Q+ HLK V A ++ + + GG+S KQ+R L A +++VGTPGRLW+++S +
Sbjct: 266 QLVKHLKEVTSSAPNVDAYIASVTGGLSVHKQQRQL-AEADIIVGTPGRLWDMVSSTPQI 324
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L +L ++ F V+DEADR++ GHF+E+ ++ L T S++ E + +
Sbjct: 325 LTKLRSIKFLVVDEADRLLSEGHFKEVGELLSALDKTRTSDEDVDEAPEEEEELGG---- 380
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSV--NGLN---SIETLSERAGMR-ANVAIV 449
RQTLVFSAT F+K L+ K S N L+ S+E L ++ + +
Sbjct: 381 -RQTLVFSAT------FQKGLQQKLAKRDHSFHDNLLDKKESMEYLLKKLRFKDEKPRFI 433
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
D+ + +A+ L+E IEC +KD YLY +L + + RT+VF SI+++R ++ L+ L
Sbjct: 434 DVNPVSQMADNLKEGIIECSAMEKDLYLYSVLLFYPKHRTLVFTNSISSVRRLTHFLQNL 493
Query: 510 GIDVWTLHAQMQQRARLK 527
+ +LH+ M Q+ARL+
Sbjct: 494 NLPALSLHSSMAQKARLR 511
>gi|91207159|sp|Q2UMY7.1|MAK5_ASPOR RecName: Full=ATP-dependent RNA helicase mak5
gi|83766938|dbj|BAE57078.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 757
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 272/522 (52%), Gaps = 60/522 (11%)
Query: 43 SAEDNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPEKGKPGKK 89
+AED+D + +VG NEL+ GGF LEEI+ + I + E G K
Sbjct: 29 TAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSE-GNGEIK 82
Query: 90 LNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKK------------- 136
K+ + ++ +D +G GD D+ S + +E ++ NE+ KK K
Sbjct: 83 FKKKEPEETNTQSDDEWEGFGDDDQAVSQEESKETQDEPNESDKKAKVKESKNAKKEKKK 142
Query: 137 ---KKKKGKKIKTVE--ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIY 191
+K +K K VE E + +G A L E + + AW L L P ++ I
Sbjct: 143 NAKDARKEQKEKAVESKEDKGIKSGLSFAA--LQEEEDDGADVSAWESLGLSPEILAGIS 200
Query: 192 RLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
+++F PT +QKACIP G+DVIG A TGSGKTLAFG+PI++ LE+ +
Sbjct: 201 KMKFTTPTSVQKACIPPIL-DGRDVIGKASTGSGKTLAFGIPILEYYLEKLRSKTQ---- 255
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQE 308
K E + P AL+++PTRELA Q+ H+ V A G+N R+ + GG+S +KQ+
Sbjct: 256 KDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLSLQKQQ 311
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR++ GHF+E I+
Sbjct: 312 RVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGHFKEAHEILAA 370
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIALSADFRKKLK-HGSLKSKQS 426
L G+ + + L K RQTLVFSAT D ++KL G
Sbjct: 371 LDRVV---DGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRDLQQKLAGKGKWTGGDI 425
Query: 427 VNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
++ S+E L ++ R +D+ + +A L+E +EC +KD +LY +L H
Sbjct: 426 MSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVECAAMEKDLFLYTLLLYHP 485
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ RT+VF SI+A+R ++ LL+ L + LH+ M Q+ARL+
Sbjct: 486 KHRTLVFTNSISAVRRLTQLLQTLQLPALALHSSMAQKARLR 527
>gi|336388501|gb|EGO29645.1| ATP-dependent RNA helicase [Serpula lacrymans var. lacrymans S7.9]
Length = 754
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 237/449 (52%), Gaps = 77/449 (17%)
Query: 135 KKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEI---STEFDA------WNELRLHPL 185
+K KKGK +E S + P+D E + + ++ S FD+ W+ LHP
Sbjct: 84 EKTDKKGKH-DDIENS---PDTPEDIEAGIESTTDVPLSSISFDSKLLLPNWHSYSLHPH 139
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE-EREK 244
L++ ++ F PTPIQ +P A +G+D++G AETGSGKTLA+GLPI+ LL R
Sbjct: 140 LLQILHHQGFTTPTPIQSKSLPKAM-EGRDIVGVAETGSGKTLAYGLPILHHLLSRSRHP 198
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN------------ 292
++K+ K ++AL++ PTRELALQV+DHL A+ I
Sbjct: 199 SSKV-------------KRQVQALVLAPTRELALQVSDHLNMFARSIEAPIKEETLDVEL 245
Query: 293 ----------------------------VRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
V + IVGGMS +KQ R++ ++++ TPGR
Sbjct: 246 SETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRGVDILIATPGR 305
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE-QT 383
LW+++ + +L +L + +LDEADRM+ENGHF EL +I+ + + + + E +T
Sbjct: 306 LWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSREDVIEPEFET 365
Query: 384 QNC-VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS---LKSKQSVNGLNSIETLSER 439
Q+ V + QT VFSAT LS D ++ LK G + K +++E L R
Sbjct: 366 QDTEVQAHAETEDALQTFVFSAT--LSKDLQRDLKKGYRPRIGKKGRSKPASTLEDLVLR 423
Query: 440 AGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAA 498
R AN ++D++ + + L+ES IEC DKD YLYY L + GR++VF +SI
Sbjct: 424 LDFRDANPEVIDISPEGGVVSGLQESKIECLSADKDIYLYYFL-LRYPGRSLVFLSSIDG 482
Query: 499 LRHISSLLKILGIDVWTLHAQMQQRARLK 527
+R ++ L+ +L + V+ LH+Q++QR RLK
Sbjct: 483 IRRLTPLMDLLNVKVFPLHSQLEQRQRLK 511
>gi|307201303|gb|EFN81150.1| ATP-dependent RNA helicase DDX24 [Harpegnathos saltator]
Length = 640
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 205/404 (50%), Gaps = 66/404 (16%)
Query: 171 STEFD--AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
STEF+ AW+ + + +++K++ F PT IQ +PAA +D++GAAETGSGKTL
Sbjct: 11 STEFNTAAWSSMGVPSVIIKALADQNFYTPTIIQAKTLPAALLGYRDILGAAETGSGKTL 70
Query: 229 AFGLPIMQRLLEEREKAAKMLEDK----------------------------GEEAEKY- 259
AFG+PI++ +LE + + AK + D+ E +Y
Sbjct: 71 AFGIPIIKGILELKSQKAKTIADEKSTETSENEERTCHEVETEDNSTNSDSEDENLSEYE 130
Query: 260 -------------APKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEK 306
P L ALI+ PTREL +Q+ HL K ++++ + GG++ K
Sbjct: 131 NCINVIELDNCQNIPSKPLYALILAPTRELVVQIKQHLTQAVKYTDIKIAAVFGGLAAVK 190
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
QERLL PE+V+ TPGRLWEL+ G HL ++ ++ F +DE DRM+E GHF+EL I+
Sbjct: 191 QERLLNQGPEIVIATPGRLWELIQQGNPHLSQVDSIRFLAIDETDRMLEKGHFQELHDIL 250
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK-HGSLKSKQ 425
+ V ++ KKRQT VFSAT+ + D L+ K
Sbjct: 251 QK------------------INVDPIKLKKRQTFVFSATLTMVHDLPDYLEKKKKRHFKS 292
Query: 426 SVNGLNSIETLSERAGMRA--NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSV 483
+ L + L + + N +VDLT A+ L E + C + KD YLYY L
Sbjct: 293 KICKLTPGQKLQKIIHLLQIKNPKVVDLTKESGTADSLTECRMTCTIDHKDYYLYYFLKR 352
Query: 484 HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
H GRT+VFC SI ++ +++L IL LHA MQQR RLK
Sbjct: 353 HN-GRTLVFCNSIGCVKRLATLFGILECRPLPLHANMQQRQRLK 395
>gi|240277958|gb|EER41465.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus H143]
Length = 723
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 207/362 (57%), Gaps = 30/362 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L + + S+ +L+F +PTPIQ ACIP A G DV+G A TGSGKTLAFG+PI++
Sbjct: 137 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVGKASTGSGKTLAFGIPILE 195
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINV 293
L+ R + D GE + KY ALI++PTRELA Q++ H+ + A IN
Sbjct: 196 YYLKNRREEPVQHND-GELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPNINA 249
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEADR+
Sbjct: 250 RIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRL 308
Query: 354 IENGHFRELQSIIDMLPMTNGSNK--GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
+ GHF+E++ I+ L +K SE + VS RQTLVFSAT
Sbjct: 309 LSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT------ 357
Query: 412 FRKKLKH-----GSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESF 465
F K L+ G ++ S+E L ++ R + +D+ + +A L+E
Sbjct: 358 FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGL 417
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+EC +KD YLY ++ H Q RT+VF SI+A+R ++ L+ L + LH+ M Q+AR
Sbjct: 418 VECPAMEKDLYLYTLMLYHPQHRTLVFTNSISAVRRLTVFLQNLNLPALALHSSMAQKAR 477
Query: 526 LK 527
L+
Sbjct: 478 LR 479
>gi|189201219|ref|XP_001936946.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984045|gb|EDU49533.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 778
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 222/395 (56%), Gaps = 46/395 (11%)
Query: 153 VSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
++N PDD +E++ AW+EL L ++ ++ +L+F +PT IQK+ IP
Sbjct: 197 LANQPDDDDEDV----------SAWDELELSEEMLGALAKLKFSKPTTIQKSTIPEIL-A 245
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
G+DVIG A TGSGKTLAFG+PI++ L R A+K EDK ALII P
Sbjct: 246 GRDVIGKASTGSGKTLAFGIPIVESYLASRSSASKEPEDK-----------MPIALIIAP 294
Query: 273 TRELALQVTDHLKGV-AKGI--NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
TRELA Q+ HL + AKG + I GG+S +KQ R L+ + ++VVGTPGRLWE++
Sbjct: 295 TRELAHQINAHLIALCAKGDFDPPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVI 353
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML-PMTNGSNKGQSEQTQNCVT 388
S G+ L + + F V+DEADR++ GHF+E+ I+ +L P +S++ +
Sbjct: 354 SDGQGLLRKFKQIKFLVVDEADRLLSEGHFKEMGEILKVLEPDDVTDENAESDEKEEI-- 411
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS--VNGLNSIETLSERAGMRANV 446
KRQTLVFSAT D ++KL G +K S ++ S+E L ++ R
Sbjct: 412 -------KRQTLVFSAT--FGKDLQRKLA-GKVKGGGSDLMSQQQSMEYLLKKLQFREEK 461
Query: 447 AI-VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
+ +D M +A+KL+E IEC +KD YLY +L + + R +VF SI+A+R I+
Sbjct: 462 PVFIDANPMSQMASKLQEGLIECAGTEKDLYLYSLLMFYTKKRALVFTNSISAVRRITPF 521
Query: 506 LKILGIDVWTLHAQMQQRARLKLFSQMITWIRKRP 540
L L + LH+ M Q+ARL+ I ++RP
Sbjct: 522 LTNLALPALPLHSNMPQKARLR----SIERFKERP 552
>gi|225561194|gb|EEH09475.1| ATP-dependent RNA helicase MAK5 [Ajellomyces capsulatus G186AR]
Length = 771
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 208/362 (57%), Gaps = 30/362 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L + + S+ +L+F +PTPIQ ACIP A G DV+G A TGSGKTLAFG+PI++
Sbjct: 189 WDPLDISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVGKASTGSGKTLAFGIPILE 247
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINV 293
L+ R + + + GE + KY ALI++PTRELA Q++ H+ + A IN
Sbjct: 248 YYLKNRCEEP-VQHNHGELSSKYPI-----ALILSPTRELAHQLSKHITALCTNAPNINA 301
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G L + + F V+DEADR+
Sbjct: 302 RIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRL 360
Query: 354 IENGHFRELQSIIDMLPMTNGSNK--GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
+ GHF+E++ I+ L +K SE + VS RQTLVFSAT
Sbjct: 361 LSEGHFKEVEEILTALDRKEIHDKVTADSESEDDASKVSP-----RQTLVFSAT------ 409
Query: 412 FRKKLKH-----GSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESF 465
F K L+ G ++ S+E L ++ R + +D+ + +A L+E
Sbjct: 410 FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGL 469
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+EC +KD YLY ++ H Q RT+VF SI+A+R ++ L+ L + LH+ M Q+AR
Sbjct: 470 VECPAMEKDLYLYTLMLYHPQHRTLVFTNSISAVRRLTVFLQNLNLPALALHSSMAQKAR 529
Query: 526 LK 527
L+
Sbjct: 530 LR 531
>gi|340938992|gb|EGS19614.1| hypothetical protein CTHT_0040930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 767
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 211/364 (57%), Gaps = 31/364 (8%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E + W L L P ++ I RL+F +PTPIQ IP + G DVIG A TGSGKTL
Sbjct: 191 EDDVDLSEWVPLGLSPPVLSCIARLKFLKPTPIQARAIPEVIN-GHDVIGKAATGSGKTL 249
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
AFG+PI++ L + A E G++ H ALI++PTRELA Q+TDHLK +
Sbjct: 250 AFGIPIVEAWLSKIASA----ESSGQK--------HPIALILSPTRELAHQITDHLKQLC 297
Query: 289 KGINV--RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
G+ + + GG++ +KQER L+ + ++VVGTPGRLWE+MS + ++SF V
Sbjct: 298 AGLATAPYICSVTGGLAVQKQERQLQ-KADIVVGTPGRLWEVMSTSNAVMQSFRSISFLV 356
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+DEADR++++GHF+E + I+ L T G+ E+ + +S R++RQTLVFSAT
Sbjct: 357 VDEADRILKDGHFKEAEKILLALDRTV---PGEEEENDSDDEKTS--RRRRQTLVFSAT- 410
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLN---SIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
F K L+ L K N + S+E L +R R + +D + +A L+E
Sbjct: 411 -----FNKALQQ-KLAGKARYNLMGETESLEYLLKRLNFREHPKFIDTNPITQMAENLKE 464
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
I+C + +KD YLY +L + R +VF SI +R +++ L L + V+ LH++M+Q+
Sbjct: 465 GLIQCGDMEKDLYLYAVLLLQPTRRALVFTNSINTVRRLTAFLNNLNLPVFALHSEMEQK 524
Query: 524 ARLK 527
ARL+
Sbjct: 525 ARLR 528
>gi|312381486|gb|EFR27227.1| hypothetical protein AND_06199 [Anopheles darlingi]
Length = 799
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/393 (35%), Positives = 205/393 (52%), Gaps = 60/393 (15%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S E+ W EL + ++K+I FK PT IQ+ +PAA +D++GAAETGSGKTLAF
Sbjct: 217 SVEYIRWIELGVSEPIVKAIAEKGFKTPTEIQEKSLPAAIFGHRDLLGAAETGSGKTLAF 276
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYA------------------------------ 260
GLP+++ + + ++ ++ D +E+E
Sbjct: 277 GLPMLEGIRKLKQLNEPIIYDNEDESETVHSDHELTPPPEDYELSPEDQKVFAMGSSKKK 336
Query: 261 ----PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPE 316
P L LI+TPTRELALQ+ DHLK V K ++ + + KQER+L+ PE
Sbjct: 337 QPMDPTKPLYGLILTPTRELALQINDHLKSVTKYTDINIATVFAV----KQERMLRKCPE 392
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
+V+ TPGRLWEL+ G +HL ++ + F V+DE DRM+E GHF EL+ ++++
Sbjct: 393 IVIATPGRLWELIQAGNQHLAKVMHIRFLVIDETDRMLERGHFEELKQLLEL-------- 444
Query: 377 KGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGL--NSIE 434
+ + +KKR+ +FSAT+ + D + LK K+K+ + +
Sbjct: 445 ----------INTNEEAKKKRRNYIFSATLTMDHDLPEHLKKNPKKAKKVMKETPGQRLN 494
Query: 435 TLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCT 494
L + GM N IVDLT A L ES I C+ KD YLYY L H GRT+VFC
Sbjct: 495 NLIQTIGM-TNPKIVDLTKEQATAQTLTESRIVCQTPHKDFYLYYFLERH-PGRTLVFCN 552
Query: 495 SIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
SI +R + +L + L + +L MQQR RLK
Sbjct: 553 SIECVRRLVALFEYLNCNPLSLFGSMQQRQRLK 585
>gi|392561989|gb|EIW55170.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 677
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/411 (37%), Positives = 212/411 (51%), Gaps = 74/411 (18%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
T AWN +LHP L +S+Y +F EPTPIQ +P A + +DV+G AETGSGKTLA+G
Sbjct: 33 TLLPAWNTFQLHPQLARSLYARKFTEPTPIQAQTLPLAL-KNRDVVGVAETGSGKTLAYG 91
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK------ 285
LPI+ LL E + +RALI+TPTRELALQV+ HL
Sbjct: 92 LPILHHLLTEA---------YSRPIPSSKTRRPVRALIVTPTRELALQVSSHLNACLTHA 142
Query: 286 -------GVAKGIN--------------------------------VRVVPIVGGMSTEK 306
G A+G + V V IVGGMS +K
Sbjct: 143 DVEVDDAGPAEGASDESSKDKSKPKAKGKGKAKAEVQGDKPKSPPLVCVAAIVGGMSAQK 202
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
Q R+L +V+V TPGRLW+++ ++ ++ L F VLDEADRMIE+GHF E+ +I+
Sbjct: 203 QRRVLSRGVDVLVATPGRLWDIIQEDDELATQIENLRFLVLDEADRMIESGHFAEMDNIL 262
Query: 367 -------DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK-- 417
D + + +G++E ++ V L QT VFSAT LS D +K LK
Sbjct: 263 RLTLRKQDDEIIEPENQEGEAEDSKEDVRAGEL-----QTFVFSAT--LSKDLQKNLKKR 315
Query: 418 -HGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
HG + K + L A+VD++ + + L ES IEC DKDAY
Sbjct: 316 THGR-RRKNDKPASTLDDLLLRLDFRDPEPAVVDISPVGSVVATLTESKIECLVTDKDAY 374
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
LYY L + GRT+VF ++I +R + L+ +LG+ + LH+Q++QR RLK
Sbjct: 375 LYYFL-LRYPGRTLVFLSAIDGIRRLLPLMDLLGVHAFPLHSQLEQRQRLK 424
>gi|258575119|ref|XP_002541741.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902007|gb|EEP76408.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 777
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 221/412 (53%), Gaps = 27/412 (6%)
Query: 126 NLKNETGKKKKKKKK---GKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRL 182
N N+T K+ K++ +K ++ V S D+ EE+ T+ AW+ L L
Sbjct: 143 NASNDTAVNKQSKERVLREEKENGIQAGVPFSALQDEVEED--------TDVSAWDPLGL 194
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
L S+ RL+F PTPIQ ACIPA QG DVIG A TGSGKTLAFG+PI++ L
Sbjct: 195 RAELQTSLARLKFCSPTPIQSACIPAVL-QGHDVIGKASTGSGKTLAFGIPIVEHYLGRY 253
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVPIV 299
+ AP ALI++PTRELA Q+ HL + A + R+ +
Sbjct: 254 PTGQAPASSNEDGTSGKAPI----ALILSPTRELAHQLNKHLTDLISNAPHTSARIASVT 309
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 359
GG+S KQ+RLL A ++++ TPGRLWE++ L +L + F V+DEADR++ GHF
Sbjct: 310 GGLSIYKQQRLL-ADADIIIATPGRLWEVIGSMPGFLTKLKRIKFLVIDEADRLLSEGHF 368
Query: 360 RELQSIIDMLPMTNGSNKG-QSEQTQNCVTVSSLQRKKRQTLVFSATI--ALSADFRKKL 416
+E + I++ L + +G + ++++RQTLVFSAT L K+
Sbjct: 369 KEAEEIVNALDRVEKTEEGYEEGSEPGSPEEEEEEQRQRQTLVFSATFHKGLQQKLSGKI 428
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRA-NVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
++ ++ ++ S+E L + R +D+ + +A L+E ++C DKD
Sbjct: 429 RY---RNDDLLDKKESMEYLLRKLNFREERPKFIDVNPISQMAENLKEGLVQCAPMDKDL 485
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+LY +L H + RT++F SI+A+R I+ L+ L + + LH+ M Q+ARL+
Sbjct: 486 FLYSLLLYHPKHRTLIFTNSISAVRRITQFLQNLSLPAFALHSSMAQKARLR 537
>gi|322710764|gb|EFZ02338.1| ATP dependent RNA helicase, putative [Metarhizium anisopliae ARSEF
23]
Length = 794
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 244/440 (55%), Gaps = 31/440 (7%)
Query: 108 GDGDGDEDGSGVQKQEE--------KNLKNETGKKK-----KKKKKGKKIKTVEESVAVS 154
G+G +DG +K +E K K + G+++ +KK K +KI + + S
Sbjct: 128 GEGSDSQDGLEGEKSQETISAVKQGKASKTQKGQQQSDNGTQKKSKQQKIADKKLQKSAS 187
Query: 155 NGPDDAEEELVNEAEISTEFDA-----WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
+G + L A+ E D W L L P L+ +I +L F +PT IQ+ IP
Sbjct: 188 HGAGNEFLALAAMADEEAETDDLDMGDWVALNLSPNLVSAIAKLGFSKPTAIQEKSIPEI 247
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
G DVIG A+TGSGKTLAFG+PI+++ L+ E+ D G++ K +G + A+I
Sbjct: 248 I-AGGDVIGKAQTGSGKTLAFGIPIVEKWLDMHEEQEDQAGDDGDQPNKKNREGPM-AVI 305
Query: 270 ITPTRELALQVTDHLKGVAKGI--NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
++PTRELA Q+ DH+K V G+ + + + GG+S +KQ+R L+ + ++V+GTPGRLWE
Sbjct: 306 LSPTRELAKQIGDHIKAVCDGLPASPYICVVTGGLSIQKQQRQLE-KADIVIGTPGRLWE 364
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
++ G K + + F V+DEADR+ + G F+E ++II L N G S+ +
Sbjct: 365 VLDGDAKLQQQFTRIKFLVVDEADRLFKVGQFKEAENIIGALDRENPEENGYSDNSD--- 421
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
+ + ++RQTLVFSAT + + KL G KS ++ + + L + R
Sbjct: 422 --AEDETRERQTLVFSAT--FDKNLQTKLA-GKGKSAKTGSDEEKMAYLMKCLKFRGEPK 476
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
+D+ + +A+ L E IEC +KD YLY +L ++ RT+VF SI+A+R I+ LL+
Sbjct: 477 FIDVNPVSQMADNLREGLIECGAMEKDLYLYTVLLLNPGRRTLVFTNSISAVRRITPLLQ 536
Query: 508 ILGIDVWTLHAQMQQRARLK 527
L + LH+QM Q+ARL+
Sbjct: 537 HLNQNALPLHSQMIQKARLR 556
>gi|443922417|gb|ELU41869.1| delta-sterol C-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1600
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 208/374 (55%), Gaps = 45/374 (12%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + LHP++ S+ L F PTPIQK+ +P A QG+DV+G AETGSGKTLA+ LPI+Q
Sbjct: 137 WASMSLHPIISHSLLELSFTNPTPIQKSALPFA-QQGRDVVGVAETGSGKTLAYSLPILQ 195
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV----AKGIN 292
+L + L ALI+ PTRELALQV +HLK V A N
Sbjct: 196 YILSNPTSNSSR---------------KLAALILAPTRELALQVCEHLKKVISAGASSSN 240
Query: 293 -----VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL-----HTL 342
V + IVGG+S +KQ R+L+ +++V TPGRLW+++ GE V L ++
Sbjct: 241 GGVPRVSIAAIVGGLSVQKQRRILERGADIIVATPGRLWDVL--GEVFSVYLLAERIRSV 298
Query: 343 SFFVLDEADRMIENGHFRELQSIIDML-----PMTNGSNKGQ---SEQTQNCVTVSSLQR 394
F VLDEADRM+E GHF+EL +I+ + P G +E T V S+
Sbjct: 299 QFLVLDEADRMVEEGHFQELDNIVKLTVRRKEPEEQDEMAGDPVFAEATAAAVD-SAPAN 357
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTN 453
+ QT VFSAT +S + + L S K K ++++ L + R N AIVDL+
Sbjct: 358 TEMQTFVFSAT--MSKELQINLSRRSTKRKNKDQKGSTLDDLLMKLDFRDPNPAIVDLSP 415
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
+ L ES IEC DKD YLYY L + GR++VF +SI +R ++ +++ L + V
Sbjct: 416 EYGKVSTLTESRIECVSGDKDFYLYYFL-LRYPGRSLVFVSSIDGIRRLTPIMEQLQLKV 474
Query: 514 WTLHAQMQQRARLK 527
+ LH+Q+QQR RLK
Sbjct: 475 FPLHSQLQQRQRLK 488
>gi|449303441|gb|EMC99448.1| hypothetical protein BAUCODRAFT_29794 [Baudoinia compniacensis UAMH
10762]
Length = 718
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 237/472 (50%), Gaps = 41/472 (8%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQK 121
GF LEE+D+ + P GK N RK S + +GD DED
Sbjct: 32 GFFGLEEVDDVEV---VRDPSSGKLSYVPNDV-RKSSVQDARSNGD-----DEDAWEGWD 82
Query: 122 QEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNG-PDDAEEELVNEAEISTEFDAWNEL 180
+L N K K+ K E S A PD E +++ AW L
Sbjct: 83 DTPHHLGNGRKTASKATPSAKRFKPNETSTAALQVLPDVLENSMID-------VSAWRPL 135
Query: 181 RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE 240
+L P + S+ RL F PTPIQ+A IP A G DV+G A TGSGKTLAFG+PI++R LE
Sbjct: 136 KLSPDTLASLARLGFSNPTPIQRAAIPEAL-GGHDVVGKASTGSGKTLAFGIPILERFLE 194
Query: 241 EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV---RVVP 297
R K + KG H AL+++PTRELA Q+ HL+ + +
Sbjct: 195 LRSKRNNV-PSKGR---------HPLALLLSPTRELAHQLDKHLRALCSSDYFDGPSIAT 244
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
+ GG+S KQ+RLLK ++V+GTPGRLWE+MS G+ L L + F ++DEADR++ G
Sbjct: 245 VTGGLSILKQQRLLKT-ADIVIGTPGRLWEVMSSGQGTLDALSRIQFLIVDEADRLLSEG 303
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV-SSLQRKKRQTLVFSATIALSADFRKKL 416
H++E++ I+D L + SE + V + R RQTLVFSAT +KKL
Sbjct: 304 HYKEVEEILDAL-----YRRHDSEDDEAAVQADAGDSRPARQTLVFSAT--FDRGLQKKL 356
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + S+ L + R + +D+ + LA L+E + C +KD
Sbjct: 357 GGKGQSTGNLLGNKESLAYLLAKLKFREDKPKFIDVDPLKQLATGLKEGLVSCSGTEKDL 416
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YLY +L +H RT+VF SI A+R I+ L+ L I LH+ M Q+ARL+
Sbjct: 417 YLYALLLLHPNARTLVFTNSIDAVRRITPFLQNLNIQALGLHSGMPQKARLR 468
>gi|154274552|ref|XP_001538127.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|160409985|sp|A6R9U4.1|MAK5_AJECN RecName: Full=ATP-dependent RNA helicase MAK5
gi|150414567|gb|EDN09929.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 772
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 215/380 (56%), Gaps = 32/380 (8%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
+A EE V+ E+ + W+ L + + S+ +L+F +PTPIQ ACIP A G DV+G
Sbjct: 173 EALEEEVDGDEV--DVSGWDPLGISAEIQTSLSKLRFAKPTPIQTACIPLIA-SGHDVVG 229
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKTLAFG+PI++ L+ R + D E + KY ALI++PTRELA
Sbjct: 230 KASTGSGKTLAFGIPILEYYLKNRREEPVQHND-AELSSKYPI-----ALILSPTRELAH 283
Query: 279 QVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
Q++ H+ + A IN R+ + GG+S +KQ+R+L A ++V+GTPGRLW+++S G
Sbjct: 284 QLSKHITALCTNAPNINARIALLTGGLSVQKQQRVL-ANADIVIGTPGRLWDVISTGHGL 342
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK--GQSEQTQNCVTVSSLQ 393
L + + F V+DEADR++ GHF+E++ I+ L +K SE + +
Sbjct: 343 LRKFQNIKFLVIDEADRLLSEGHFKEVEEILTALDRKEIHHKVTADSESEDDAS-----R 397
Query: 394 RKKRQTLVFSATIALSADFRKKLKH-----GSLKSKQSVNGLNSIETLSERAGMRANVA- 447
RQTLVFSAT F K L+ G ++ S+E L ++ R +
Sbjct: 398 ESPRQTLVFSAT------FHKGLQQKLAGKGRYFDGDLLDDKQSMEYLLKKLNFREDRPK 451
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
+D+ + +A L+E +EC +KD YLY ++ H Q RT+VF SI+A+R +++ L+
Sbjct: 452 FIDVNPVAQMAENLKEGLVECPAMEKDLYLYTLMLYHPQHRTLVFTNSISAVRRLTAFLQ 511
Query: 508 ILGIDVWTLHAQMQQRARLK 527
L + LH+ M Q+ARL+
Sbjct: 512 NLNLPALALHSSMAQKARLR 531
>gi|327259240|ref|XP_003214446.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Anolis
carolinensis]
Length = 799
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 209/410 (50%), Gaps = 80/410 (19%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW L + +++++ L F PTPIQ +P+A DV+GAAETGSGKTLAF +P
Sbjct: 189 ISAWKGLFVPKPVLQALSELGFSAPTPIQALALPSAIRDSMDVLGAAETGSGKTLAFAIP 248
Query: 234 IMQRLLEERE-----KAAKM-LEDKGEEAEKYA--------------------------- 260
++ +L+ + K +K+ LED G+ E+ +
Sbjct: 249 MIHSILQWYKSRGLPKGSKIQLEDGGDSEEELSKEEASEDIGGLSSAEANCAAISSVESL 308
Query: 261 -------------PK--------GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIV 299
PK L L++TPTRELA+QV H+ V + ++ +V
Sbjct: 309 VTLCEKASEDGDHPKHDTVGERSNPLLGLVLTPTRELAVQVKHHIDAVTRYTGIKTANLV 368
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 359
GGM+ +KQ+R+LK +PE+V+ TPGRLWEL+ + HL L L V+DEADRM+E GHF
Sbjct: 369 GGMAPQKQQRILKRKPEIVIATPGRLWELIQEKQPHLSSLKQLRCLVIDEADRMVEKGHF 428
Query: 360 RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL--SADFRKKLK 417
EL +++ML SS KRQT VFSAT+ L A R K
Sbjct: 429 LELSQLLEMLN-------------------SSQYNPKRQTFVFSATLTLIHQAPARVFQK 469
Query: 418 HGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYL 477
+++ ++ +E L ++ GM++ ++DLT L E+ I C E+KD +L
Sbjct: 470 KNAIR----IDKKTKLELLMQKVGMKSKPKVIDLTRKEATVETLTETRIHCDTEEKDYFL 525
Query: 478 YYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YY L + GRT+VF SI ++ +++LL IL + LHA M Q+ RLK
Sbjct: 526 YYFL-LQYPGRTMVFANSIDCIKRLTALLTILDCNPLPLHANMHQKQRLK 574
>gi|409048568|gb|EKM58046.1| hypothetical protein PHACADRAFT_182435 [Phanerochaete carnosa
HHB-10118-sp]
Length = 763
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 231/450 (51%), Gaps = 76/450 (16%)
Query: 139 KKGKKIKTVEESVAVSNGPDDA--EEELVNEAEISTEFD------AWNELRLHPLLMKSI 190
KKG K +V GP A E + E FD AW++ LHP L + +
Sbjct: 85 KKGAKKTAQPHNVETKAGPSRASVEPTVTEERPEERPFDVKALLPAWHQFSLHPQLNRVL 144
Query: 191 YRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLE 250
Y +F PTPIQ IP A +GKDV+G AETGSGKTLA+GLPI+ +L + AK+
Sbjct: 145 YAQRFLIPTPIQAKAIPIAT-KGKDVVGIAETGSGKTLAYGLPILHYILTQ----AKV-- 197
Query: 251 DKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV----------------- 293
E + +RALI+ PTRELALQV+ HL ++V
Sbjct: 198 ----EPPAQRQRRPMRALILAPTRELALQVSSHLNACLNNVDVFSVKMKREEEEPDLGSR 253
Query: 294 -------------------------RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
V IVGGMS +KQ R+L +V+V TPGRLW++
Sbjct: 254 LKSKGKSKAKLDSEGLSKARSPPLVSVAAIVGGMSAQKQRRILDRGVDVLVATPGRLWDI 313
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKG-----QSEQT 383
M E ++ L F VLDEADRMIENGHF EL +II L + ++ + ++
Sbjct: 314 MQEDEDLAYDIKHLRFLVLDEADRMIENGHFAELDNII-RLTLKQSEDEAIEPEFEHDED 372
Query: 384 QNCVT--VSSLQ---RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS-IETLS 437
+N V ++ Q +++ QTLVFSAT LS D ++ LK S S++S ++ + L
Sbjct: 373 RNTVAKDLADEQGEMKEELQTLVFSAT--LSKDLQRNLKKRSRPSRKSSKPASTLDDLLL 430
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
N ++DL+ + + L ES I+C DKDA+LYY L + GR+++F +SI
Sbjct: 431 RLDFRDPNPEVIDLSPEGGVVSTLRESRIDCLTNDKDAHLYYFL-LRYPGRSLIFLSSID 489
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+R + L+++L + + LH+Q++QR RLK
Sbjct: 490 GIRRLMPLMELLQLKAFPLHSQLEQRQRLK 519
>gi|296813881|ref|XP_002847278.1| ATP-dependent RNA helicase MAK5 [Arthroderma otae CBS 113480]
gi|238842534|gb|EEQ32196.1| ATP-dependent RNA helicase MAK5 [Arthroderma otae CBS 113480]
Length = 749
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 210/363 (57%), Gaps = 33/363 (9%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW+ L L P L S+ RL+F +PTPIQ A IP G+DVIG A TGSGKTLAFGLPI+
Sbjct: 174 AWDGLDLRPELQTSLSRLKFSKPTPIQTAAIPDIL-AGRDVIGKAATGSGKTLAFGLPIL 232
Query: 236 QRLLEEREKAAKM-LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGI 291
Q LL K + ++ +E + A LI++PTRELA Q+ HLK V A +
Sbjct: 233 QYLLNNNNKHGQGGIKSSSKEKKPIA-------LILSPTRELAHQLVKHLKEVTSSAPNV 285
Query: 292 NVRVVPIVGGMSTEKQER-LLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
+ + + GG+S KQ+R LL A +++VGTPGRLW+++S K L +L + F V+DEA
Sbjct: 286 DAYIASVTGGLSMHKQQRQLLDA--DIIVGTPGRLWDMVSSTPKILTKLRGIKFLVVDEA 343
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DR++ GHF+EL ++ L S+ + + V +RQTLVFSAT
Sbjct: 344 DRLLSEGHFKELGELLSALDKAKTSDDVHGNEDEEDEPV------ERQTLVFSAT----- 392
Query: 411 DFRKKLKHGSLKSKQSV--NGLN---SIETLSERAGMRANVA-IVDLTNMCVLANKLEES 464
F+K L+ K +S N L+ S+E L ++ + VD+ + +A+ L+E
Sbjct: 393 -FQKGLQQKLAKRDKSFHDNLLDKKESMEYLLKKLNFKDEKPRFVDVNPVSQMADNLKEG 451
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
IEC +KD YLY +L + + RT+VF SI+++R ++ L+ LG+ +LH+ M Q+A
Sbjct: 452 IIECSAMEKDLYLYAVLLFYPKHRTLVFTNSISSVRRLTQFLQNLGLPALSLHSSMAQKA 511
Query: 525 RLK 527
RL+
Sbjct: 512 RLR 514
>gi|453089379|gb|EMF17419.1| DEAD-domain-containing protein, partial [Mycosphaerella populorum
SO2202]
Length = 687
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 252/490 (51%), Gaps = 58/490 (11%)
Query: 62 GFLSLEEIDEA-----------SYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDG 110
GF LEEID S+ Q+P N+ K + +ED+ G
Sbjct: 69 GFFGLEEIDNVEVTRDGENGALSFLSQVPA----------NAPKSNGNREVDEDAESWSG 118
Query: 111 DGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAE- 169
DED +Q ++E K K + K+ K + S G A LV E+E
Sbjct: 119 FADEDQPALQVRKESKTDKTKKKAKAEGKRKPK--SAPNGDVTSEG---AFSRLVEESED 173
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+ WN L+L P M S+ +L+F +PTPIQ+ IP G DVIG A TGSGKTLA
Sbjct: 174 TGVDVSQWNPLKLSPDTMASLSKLRFTKPTPIQQHVIPEVL-AGHDVIGKASTGSGKTLA 232
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
FG+PI++R LE ++ K G AL+++PTRELA Q+ HL +
Sbjct: 233 FGIPILERFLESSQQRKKGKSGSGP-----------LALLLSPTRELAHQLDKHLTALFS 281
Query: 290 GINV---RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
G++ + + GG+S +KQ+R+LK +VV+GTPGRLWE++ G L + F V
Sbjct: 282 GLSTDRPSIATLTGGLSLQKQQRMLK-DADVVIGTPGRLWEVIGDGHGVAASLKHIDFLV 340
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV------SSLQRKKRQTL 400
+DEADR++ GHF+E++ I++ L + +S++T+N T +S + KRQTL
Sbjct: 341 IDEADRLLSEGHFKEVEEILNALDRDEAQD--ESDETENATTPRTTKSQASSRPAKRQTL 398
Query: 401 VFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVL 457
VFSAT AL KL H ++ S+E L + R +D+ + L
Sbjct: 399 VFSATFDRALQRKLVGKLSH----RDNLLSNAQSMEYLLSKLNFREETPKFIDMNPINQL 454
Query: 458 ANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
A L+E IEC +KD YLY +L ++ RTIVF SI+A+R I+ LL+ L ++ LH
Sbjct: 455 ATGLKEGLIECSGTEKDLYLYALLLLYSTQRTIVFTNSISAVRRIAPLLQNLNLNAIALH 514
Query: 518 AQMQQRARLK 527
+ M Q+AR++
Sbjct: 515 SGMAQKARMR 524
>gi|336375445|gb|EGO03781.1| hypothetical protein SERLA73DRAFT_46424 [Serpula lacrymans var.
lacrymans S7.3]
Length = 615
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 214/397 (53%), Gaps = 68/397 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ LHP L++ ++ F PTPIQ +P A +G+D++G AETGSGKTLA+GLPI+
Sbjct: 34 WHSYSLHPHLLQILHHQGFTTPTPIQSKSLPKAM-EGRDIVGVAETGSGKTLAYGLPILH 92
Query: 237 RLLEE-REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--- 292
LL R ++K+ K ++AL++ PTRELALQV+DHL A+ I
Sbjct: 93 HLLSRSRHPSSKV-------------KRQVQALVLAPTRELALQVSDHLNMFARSIEAPI 139
Query: 293 -------------------------------------VRVVPIVGGMSTEKQERLLKARP 315
V + IVGGMS +KQ R++
Sbjct: 140 KEETLDVELSETQQLKDKSKGKNVVSGTAKTFSKPPLVSIAAIVGGMSAQKQRRIIDRGV 199
Query: 316 EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM-LPMTNG 374
++++ TPGRLW+++ + +L +L + +LDEADRM+ENGHF EL +I+ + L ++
Sbjct: 200 DILIATPGRLWDILEEDDSLAKQLASLRYLILDEADRMVENGHFAELDNILRLTLRLSRF 259
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS---LKSKQSVNGLN 431
+E + T +L QT VFSAT LS D ++ LK G + K +
Sbjct: 260 FETQDTEVQAHAETEDAL-----QTFVFSAT--LSKDLQRDLKKGYRPRIGKKGRSKPAS 312
Query: 432 SIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTI 490
++E L R R AN ++D++ + + L+ES IEC DKD YLYY L + GR++
Sbjct: 313 TLEDLVLRLDFRDANPEVIDISPEGGVVSGLQESKIECLSADKDIYLYYFL-LRYPGRSL 371
Query: 491 VFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
VF +SI +R ++ L+ +L + V+ LH+Q++QR RLK
Sbjct: 372 VFLSSIDGIRRLTPLMDLLNVKVFPLHSQLEQRQRLK 408
>gi|325185978|emb|CCA20482.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 743
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 216/395 (54%), Gaps = 59/395 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W LH ++++++ +F PT IQ+ I AA Q +DV+G A TGSGKTLAFG+PI+Q
Sbjct: 152 WEAFNLHHTILEALHDNKFLAPTVIQRKAIAAALIQREDVVGIASTGSGKTLAFGIPILQ 211
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L +K A K P +ALII PTRELALQ+ HLK + K ++ +
Sbjct: 212 HFL-----------NKTSGALKSHPG--CKALIIAPTRELALQIQKHLKAMLKDGSIGIS 258
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMIE 355
+VGGMS +KQER+L PE+V+ TPGRLW+++ G KH LH +L F V+DEADRM++
Sbjct: 259 VLVGGMSLQKQERVLSYEPEIVIATPGRLWDIVQNGNKHFENLHLSLEFLVVDEADRMLQ 318
Query: 356 NGHFRELQSIIDML---PMTNGSNKGQSEQTQNCVT------VSSLQ-------RKKRQT 399
G +++L+ ++ ++ P + +++G ++ T V++ Q + RQT
Sbjct: 319 TGSYKDLEKLLKLINSKPASTKASRGGDSDAEDKKTLLREDAVNTRQFDLRGNKAQSRQT 378
Query: 400 LVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLAN 459
+FSAT+ RKK +SK N L+ + T+ +R G R I+DL+ +
Sbjct: 379 FLFSATMTGKCHNRKK------QSKGKTNTLDMLHTVIQRVGFRKKPTIIDLSMHTRTSE 432
Query: 460 KLEESFIECK----------------------EEDKDAYLYYILSVHGQGRTIVFCTSIA 497
L +S + K E +D YLYY L + GRTIVF SI
Sbjct: 433 ALPQSPSQSKAQSSSLEVTLPEGLELCEYRVLETTRDNYLYYFLEQY-PGRTIVFLNSIN 491
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+R + SLL++L + V++LHA+MQQR RLK Q
Sbjct: 492 HVRQLHSLLELLELPVFSLHAEMQQRQRLKKLDQF 526
>gi|317142764|ref|XP_001819080.2| ATP-dependent RNA helicase mak5 [Aspergillus oryzae RIB40]
gi|391863775|gb|EIT73074.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 769
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 274/533 (51%), Gaps = 70/533 (13%)
Query: 43 SAEDNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPE------- 82
+AED+D + +VG NEL+ GGF LEEI+ + I + E
Sbjct: 29 TAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSEGNGEIKF 83
Query: 83 KGKPGKKLNSKKR----KRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKK-- 136
K K GK S + + ++ +D +G GD D+ S + +E ++ NE+ KK K
Sbjct: 84 KAKAGKPKKSILKKKEPEETNTQSDDEWEGFGDDDQAVSQEESKETQDEPNESDKKAKVK 143
Query: 137 --------------KKKKGKKIKTVE--ESVAVSNGPDDAEEELVNEAEISTEFDAWNEL 180
+K +K K VE E + +G A L E + + AW L
Sbjct: 144 ESKNAKKEKKKNAKDARKEQKEKAVESKEDKGIKSGLSFAA--LQEEEDDGADVSAWESL 201
Query: 181 RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE 240
L P ++ I +++F PT +QKACIP G+DVIG A TGSGKTLAFG+PI++ LE
Sbjct: 202 GLSPEILAGISKMKFTTPTSVQKACIPPIL-DGRDVIGKASTGSGKTLAFGIPILEYYLE 260
Query: 241 EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVP 297
+ + K E + P AL+++PTRELA Q+ H+ V A G+N R+
Sbjct: 261 KLRSKTQ----KDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVNARIAL 312
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
+ GG+S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR++ G
Sbjct: 313 LTGGLSLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEG 371
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIALSADFRKKL 416
HF+E I+ L G+ + + L K RQTLVFSAT D ++KL
Sbjct: 372 HFKEAHEILAALDRVV---DGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRDLQQKL 426
Query: 417 K-HGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKEEDKD 474
G ++ S+E L ++ R +D+ + +A L+E +EC +KD
Sbjct: 427 AGKGKWTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVECAAMEKD 486
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+LY +L H + RT+VF SI+A+R ++ LL+ L + LH+ M Q+ARL+
Sbjct: 487 LFLYTLLLYHPKHRTLVFTNSISAVRRLTQLLQTLQLPALALHSSMAQKARLR 539
>gi|426195290|gb|EKV45220.1| hypothetical protein AGABI2DRAFT_120189 [Agaricus bisporus var.
bisporus H97]
Length = 761
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 217/440 (49%), Gaps = 100/440 (22%)
Query: 158 DDAEEELVNEAEI----STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
DD +E V+ +EI ST W LHP L+ ++YR F+ PT IQ A IP A +G
Sbjct: 96 DDIQE--VSSSEILPFDSTLLPEWASYSLHPQLLHALYRKGFESPTSIQAAAIPVAV-KG 152
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH------LRA 267
KDV+G A+TGSGKTLA+G+PI+ LL + P+ H ++A
Sbjct: 153 KDVVGVAQTGSGKTLAYGIPILHYLLSQ-------------------PRPHPNKRRPVKA 193
Query: 268 LIITPTRELALQVTDHLK-----------------------------GVAKG-------- 290
LI+ PTRELALQV+ HL G KG
Sbjct: 194 LILAPTRELALQVSSHLNECLNPTDRDTPATRNENSPDEAQGKDEPAGNQKGKRKKAVHN 253
Query: 291 -------INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
+V V IVGGMS +KQ R++ +V+VGTPGRLW+++ + EL L
Sbjct: 254 LPVKKRPPHVSVAAIVGGMSAQKQRRIIDRGVDVLVGTPGRLWDIIGEDDSLAKELKNLR 313
Query: 344 FFVLDEADRMIENGHFRELQSII---------DMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
F VLDEADRMIE+GHF EL++I+ D +P+ + + + Q TV L
Sbjct: 314 FLVLDEADRMIESGHFAELENILRLTLREDRDDEIPVEYNAMDTNTNEEQKPNTVYDL-- 371
Query: 395 KKRQTLVFSATIALSADFRKKLK-------HGSLKSKQSVNGLNSIETLSERAGMRANVA 447
QT V SAT LS D ++ LK + K K + L
Sbjct: 372 ---QTFVLSAT--LSKDLQRNLKKRWRPKDYKKRKGKNDKPATTLDDLLLRLDFRDPEPE 426
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
I+DL+ + + L+E+ IEC +KD YLYY L H GR++VF +SI +R + LL
Sbjct: 427 IIDLSPEGKVVSTLQEAKIECLVNEKDTYLYYFLLRH-PGRSLVFLSSIDGVRRLMPLLG 485
Query: 508 ILGIDVWTLHAQMQQRARLK 527
+L I V+ LH+Q++QR RLK
Sbjct: 486 LLSIKVFPLHSQLEQRQRLK 505
>gi|67522587|ref|XP_659354.1| hypothetical protein AN1750.2 [Aspergillus nidulans FGSC A4]
gi|74657524|sp|Q5BCI0.1|MAK5_EMENI RecName: Full=ATP-dependent RNA helicase mak5
gi|40744880|gb|EAA64036.1| hypothetical protein AN1750.2 [Aspergillus nidulans FGSC A4]
gi|259487094|tpe|CBF85492.1| TPA: ATP-dependent RNA helicase mak5 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BCI0] [Aspergillus
nidulans FGSC A4]
Length = 770
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 208/358 (58%), Gaps = 21/358 (5%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW L L P + S+ +L+F PT +QK+CIP G DVIG A TGSGKTLAFGLPI+
Sbjct: 198 AWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPIL-DGHDVIGKASTGSGKTLAFGLPIL 256
Query: 236 QRLLE-EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGI 291
+ LE ER K D EE EK ALI++PTRELA Q+ H+ G+ A G+
Sbjct: 257 EHYLERERRKTI----DSEEEKEKIPI-----ALILSPTRELAHQLQKHIYGLISNAPGV 307
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
N R + GG+S +KQ+RLL+ ++V+GTPGR+WE++ G+ + + + F V+DEAD
Sbjct: 308 NARTALLTGGLSVQKQQRLLET-ADIVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDEAD 366
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
R++ GHF+E++ I+ L + G ++ + + + +RQTLVFSAT D
Sbjct: 367 RLLSEGHFKEVEDILSSLDRVE--DGGPPDEEDDSSEENVVPGVERQTLVFSAT--FHRD 422
Query: 412 FRKKLK-HGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECK 469
++KL G +N S+E L ++ R +D+ + +A L+E +EC
Sbjct: 423 LQQKLAGKGKWTGGDIMNKKESMEYLLQKLNFREEKPKFIDVNPVSQMAEGLKEGIVECP 482
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L H + RT+VF SI+A+R I+ LL+ L + LH+ M Q+ARL+
Sbjct: 483 AMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRITQLLQTLQLPALALHSSMAQKARLR 540
>gi|302676285|ref|XP_003027826.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
gi|300101513|gb|EFI92923.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
Length = 651
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 210/385 (54%), Gaps = 42/385 (10%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC-IPAAAHQGKDVIG 218
A +E N + T + W LHP L+K++ F +PTPIQ A IPA A G+DV+G
Sbjct: 63 AVDEEPNALDTPTSLEEWEPYALHPQLLKTLQARNFLKPTPIQAAALIPALA--GRDVVG 120
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A+TGSGKTLA+GLPI+ LLE K+ GE K +RALI+ PTRELAL
Sbjct: 121 VAQTGSGKTLAYGLPILHHLLENPHKSTT-----GE-------KRPVRALILAPTRELAL 168
Query: 279 QVTDHLKGVAKGIN------------VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLW 326
QV+ HL + V V +VGGMS +KQ+R+L +V+V TPGRLW
Sbjct: 169 QVSSHLNACLNTNSDAQTNAKKPPPPVSVAALVGGMSLQKQKRILGRGVDVLVATPGRLW 228
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+++ + + L F VLDEADRMIE GHF EL ++ L +T +NK + +
Sbjct: 229 DVIQEDDDLARSIKNLKFLVLDEADRMIEAGHFAELDNV---LRLTLRANKYDEREDDDE 285
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ---SVNGLNSIETLSERAGMR 443
L QT VFSAT LS D ++ LK K ++++ L R R
Sbjct: 286 NIQDGL-----QTFVFSAT--LSKDLQRNLKKRKAPGKSRKPRAAPASTLDDLLMRLDFR 338
Query: 444 -ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
++DL+ + + L+ES +EC DKD YLYY L + GR++VF ++I +R +
Sbjct: 339 DEEPEVIDLSPKGGVVSTLKESKVECVVSDKDVYLYYFL-LRYPGRSLVFLSAIDGIRRL 397
Query: 503 SSLLKILGIDVWTLHAQMQQRARLK 527
L+++L I + LH+Q++QR RLK
Sbjct: 398 LPLMELLEIKAFPLHSQLEQRQRLK 422
>gi|378731664|gb|EHY58123.1| hypothetical protein HMPREF1120_06141 [Exophiala dermatitidis
NIH/UT8656]
Length = 733
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 257/497 (51%), Gaps = 68/497 (13%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSA------NEEDSGDGDGDGDED 115
GF LEEI+ ++++ + E G R RS+A NEED+G+ + G ED
Sbjct: 57 GFYGLEEIE----DVEVVRDETGH-----QVTFRPRSAAALLDEPNEEDAGE-EWQGFED 106
Query: 116 ----GSGVQKQEEKNLKNETGKKKK-------KKKKGKKIKTVEESVAVSNGPDDAEEEL 164
G E K+ + K+ + KK K ++ ++ + PD ++
Sbjct: 107 EVVKGDSRPVPESKSAAPKASKQPEQALASVSKKSKSQQEDDIDADLGFDVLPDSTDD-- 164
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+A++S AW +L L P+ + + RL F PTPIQKA +P QG DVIG A TGS
Sbjct: 165 -GKADVS----AWKDLGLSPITLSQLSRLGFSNPTPIQKAAVPVIL-QGHDVIGKAVTGS 218
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAFG+PI + L E+ G + K L ALI+ PTRELALQ+ HL
Sbjct: 219 GKTLAFGIPIFEAWL--------ATENAGFKGPAKT-KDSLLALILAPTRELALQLNRHL 269
Query: 285 KGVAKGIN--VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH-----LV 337
+ G+ RV + GG+S KQ+R L + ++VV TPGRLWE+M+ + L
Sbjct: 270 NELCIGLENAPRVCAVTGGLSVYKQQRQL-STADIVVATPGRLWEVMNDSATNYDTDALA 328
Query: 338 E-LHTLSFFVLDEADRMIENGHFRELQSIIDMLP---MTNGSNKGQSEQTQNCVTVSSLQ 393
E L + F V+DEADR++ GHF+E++SI+D L + + + S+++
Sbjct: 329 ERLKKIQFLVVDEADRLLSEGHFKEVESILDALDREVIDEDAPEAPSKEST--------- 379
Query: 394 RKKRQTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN-VAIVD 450
+ RQTLVFSAT L K K G +S + ++ S+E L + R VD
Sbjct: 380 KSHRQTLVFSATFHKGLQKKLTSKNKSGWRQSTELLDNQQSMEYLLRKLSFREEKPTFVD 439
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
+ +A+ L ES +EC + KD YLY +L + +T+VF SI+A+R ++SLL+ L
Sbjct: 440 VNPASQMASALSESIVECPAKKKDLYLYALLLQNTTAKTLVFTNSISAVRRLTSLLQTLK 499
Query: 511 IDVWTLHAQMQQRARLK 527
LH+ M Q++RL+
Sbjct: 500 QPAVGLHSTMPQKSRLR 516
>gi|119470070|ref|XP_001258007.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL
181]
gi|143345269|sp|A1DMT9.1|MAK5_NEOFI RecName: Full=ATP-dependent RNA helicase mak5
gi|119406159|gb|EAW16110.1| ATP dependent RNA helicase, putative [Neosartorya fischeri NRRL
181]
Length = 777
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 216/369 (58%), Gaps = 20/369 (5%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
E + + AW+ L L P ++ + +++F PT +Q+ACIP +G DVIG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR-ALIITPTRELALQVTDH- 283
KTLAFG+PI++ LE++ +D E EK + K ALI++PTRELA Q++ H
Sbjct: 251 KTLAFGIPILEHYLEKKR------DDISAEKEKKSEKDSTPIALILSPTRELAHQLSKHI 304
Query: 284 --LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
L A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLP-MTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
+ F V+DEADR++ GHF+E++ I++ L + +G G Q S +RQTL
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEEILNALDRVEDGEVPGGENQ---ASEEESDPSSERQTL 420
Query: 401 VFSATIALSADFRKKLK-HGSLKSKQSVNGLNSIETLSERAGMRAN-VAIVDLTNMCVLA 458
VFSAT D ++KL G ++ S++ L ++ R +D+ + +A
Sbjct: 421 VFSAT--FHRDLQQKLAGKGKWTGGDVMDKKESMDYLLQKLNFREEKPKFIDMNPISQMA 478
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
+ L+E +EC +KD +LY +L H + RT+VF SI+A+R ++ LL+ L + LH+
Sbjct: 479 DNLKEGIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLTKLLQTLQLPALALHS 538
Query: 519 QMQQRARLK 527
M Q+ARL+
Sbjct: 539 SMAQKARLR 547
>gi|238501664|ref|XP_002382066.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220692303|gb|EED48650.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 769
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 274/533 (51%), Gaps = 70/533 (13%)
Query: 43 SAEDNDPFAFLVGSNELD-------------GGFLSLEEIDEASYNLQIPKPE------- 82
+AED+D + +VG NEL+ GGF LEEI+ + I + E
Sbjct: 29 TAEDSD-WDGIVGMNELNWKEVALPDRLEDAGGFFGLEEIE----GVDIIRSEGNGEIKF 83
Query: 83 KGKPGKKLNSKKR----KRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKK-- 136
K K GK S + + ++ +D +G GD D+ S + +E ++ NE+ KK K
Sbjct: 84 KAKAGKPKKSILKKKEPEETNTQSDDEWEGFGDDDQAVSQEESKETQDEPNESDKKAKVK 143
Query: 137 --------------KKKKGKKIKTVE--ESVAVSNGPDDAEEELVNEAEISTEFDAWNEL 180
+K +K K VE + + +G A L E + + AW L
Sbjct: 144 ESKNAKKEKKKNAKDARKEQKEKAVESKKDKGIKSGLSFAA--LQEEEDDGADVSAWESL 201
Query: 181 RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE 240
L P ++ I +++F PT +QKACIP G+DVIG A TGSGKTLAFG+PI++ LE
Sbjct: 202 GLSPEILAGISKMKFTTPTSVQKACIPPIL-DGRDVIGKASTGSGKTLAFGIPILEYYLE 260
Query: 241 EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGINVRVVP 297
+ + K E + P AL+++PTRELA Q+ H+ V A G+N R+
Sbjct: 261 KLRSKTQ----KDSEKTETTPI----ALVLSPTRELAHQLAKHIGEVVSHAPGVNARIAL 312
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
+ GG+S +KQ+R+L ++V+GTPGR+WE++S G + ++ + F V+DEADR++ G
Sbjct: 313 LTGGLSLQKQQRVL-TNADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEG 371
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIALSADFRKKL 416
HF+E I+ L G+ + + L K RQTLVFSAT D ++KL
Sbjct: 372 HFKEAHEILAALDRVV---DGEFPDESSDESDDELDPKSGRQTLVFSAT--FHRDLQQKL 426
Query: 417 K-HGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKEEDKD 474
G ++ S+E L ++ R +D+ + +A L+E +EC +KD
Sbjct: 427 AGKGKWTGGDIMSQKESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVECAAMEKD 486
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+LY +L H + RT+VF SI+A+R ++ LL+ L + LH+ M Q+ARL+
Sbjct: 487 LFLYTLLLYHPKHRTLVFTNSISAVRRLTQLLQTLQLPALALHSSMAQKARLR 539
>gi|143345244|sp|Q0CI35.2|MAK5_ASPTN RecName: Full=ATP-dependent RNA helicase mak5
Length = 774
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 213/366 (58%), Gaps = 20/366 (5%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
E + + AW L L P ++ S+ +L+F PT +QK+CIP G DV+G A TGSGK
Sbjct: 194 EEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPIL-DGHDVVGKASTGSGK 252
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
TLAFG+PI++ LE++ + K +DK E + ALI++PTRELA Q+ H+
Sbjct: 253 TLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVKHIGE 304
Query: 287 V---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
V A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++SGG+ + ++ +
Sbjct: 305 VITHAPGVNARIALLTGGLSVQKQQRLLNG-ADIVIGTPGRVWEVLSGGQGLISKMKEIK 363
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
+ V+DEADR++ GHF+E I+ L ++ +E+ ++ S QR QTLVFS
Sbjct: 364 YLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQR---QTLVFS 420
Query: 404 ATIALSADFRKKLK-HGSLKSKQSVNGLNSIETLSERAGMRA-NVAIVDLTNMCVLANKL 461
AT D ++KL G +N S+E L ++ R +D+ + +A L
Sbjct: 421 AT--FHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQMAEGL 478
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+E +EC +KD YLY +L H + RT+VF SI+A+R ++ L+ L + LH+ M
Sbjct: 479 KEGIVECAAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRLTQFLQALQLPALALHSSMA 538
Query: 522 QRARLK 527
Q+ARL+
Sbjct: 539 QKARLR 544
>gi|403416563|emb|CCM03263.1| predicted protein [Fibroporia radiculosa]
Length = 669
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 223/426 (52%), Gaps = 75/426 (17%)
Query: 161 EEEL-VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
EEEL V+ + W+ LHP L +++Y F PTPIQ +P A +G+D++G
Sbjct: 114 EEELPVSAFDYEALLPRWSPFSLHPQLGRALYAQHFSSPTPIQAEALPLA-RKGRDIVGV 172
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
AETGSGKTLA+GLPI+ LL A E K + +RALI+TPTRELALQ
Sbjct: 173 AETGSGKTLAYGLPILHHLLAHASPA----ESKTRRS--------VRALILTPTRELALQ 220
Query: 280 VTDHLKGV-------------------------AKGIN--------------------VR 294
V+ HL AKG V
Sbjct: 221 VSSHLNACLNSGDIGEDPAPESKSSQGSSTRKNAKGKGKEKVTSGAQLLSGRSKDPPLVS 280
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V IVGGMS +KQ R+L +V+V TPGRLW+++ ++ ++ L F VLDEADRMI
Sbjct: 281 VAAIVGGMSAQKQRRILSRGIDVLVATPGRLWDIIQEDDELATQIEHLRFLVLDEADRMI 340
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSE--------QTQNCVTVS--SLQRKKRQTLVFSA 404
E GHF E++SI+ + ++ +SE + + V S ++ + QT VFSA
Sbjct: 341 ETGHFAEMESILRLTLRQRKEDEIESELDLGLGGAEAEFDVGESKDGVKEGEMQTFVFSA 400
Query: 405 TIALSADFRKKL-KHGSLKS-KQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKL 461
T LS D ++ L K G + K+ ++++ L R R A+ A++D++ + L
Sbjct: 401 T--LSKDLQRNLKKRGRARPWKKGGKPASTLDDLLMRLDFRDASPAVIDISPEGGVVATL 458
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ES IEC DKDAYLYY L + GRT+VF +SI +R + L+++L I + LH+Q++
Sbjct: 459 QESKIECLVTDKDAYLYYFL-LRYPGRTLVFLSSIDGIRRLLPLMELLQISAFPLHSQLE 517
Query: 522 QRARLK 527
QR RLK
Sbjct: 518 QRQRLK 523
>gi|27882644|gb|AAH43900.1| LOC398446 protein, partial [Xenopus laevis]
Length = 660
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 213/419 (50%), Gaps = 73/419 (17%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
+E L + + + + AW L + +++K++ L F PTPIQ +P+A D++GA
Sbjct: 183 SENALAHTSSKNADVSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGA 242
Query: 220 AETGSGKTLAFGLPIMQRLLE---EREKAA------------------------------ 246
AETGSGKTLAF +P++ +LE +E A
Sbjct: 243 AETGSGKTLAFAIPMIHSILEWQKHQESGAAEGETKEEPTSDVNNEIDATEKQEQDMSEN 302
Query: 247 ---KMLEDKGEEAEKY---------------APKGHLRALIITPTRELALQVTDHLKGVA 288
+ +ED + +E + + L L++TPTRELA+QV H+ VA
Sbjct: 303 EDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAVA 362
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
K ++ IVGGM+++KQ+RLL RPE+V+ TPGRLWEL+ HL L L V+D
Sbjct: 363 KFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELIGERHPHLCNLRRLRCLVID 422
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRM+E GH+ EL ++++L + + KRQT VFSAT+ L
Sbjct: 423 EADRMVEKGHYAELSQLLELLSEVHYN-------------------PKRQTFVFSATLTL 463
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+L K Q V+ + + +L E+ GM+A ++DLT L E+ I C
Sbjct: 464 IHQAPTRLLQK--KRFQKVDKDSKLVSLMEKIGMKAKPKVIDLTRKQATVETLTETRIHC 521
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
++KD YLYY L + GR++VF SI ++ ++SLL IL + LHA M Q+ RLK
Sbjct: 522 ATDEKDFYLYYFL-LQYPGRSMVFANSIDCIKRLTSLLTILECNPLPLHANMHQKQRLK 579
>gi|147904244|ref|NP_001082400.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Xenopus laevis]
gi|50418383|gb|AAH77543.1| LOC398446 protein [Xenopus laevis]
Length = 706
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 213/419 (50%), Gaps = 73/419 (17%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
+E L + + + + AW L + +++K++ L F PTPIQ +P+A D++GA
Sbjct: 94 SENALAHTSSKNADVSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGA 153
Query: 220 AETGSGKTLAFGLPIMQRLL-------------EEREKA--------------------- 245
AETGSGKTLAF +P++ +L E +E+
Sbjct: 154 AETGSGKTLAFAIPMIHSILEWQKHQESGAAEGETKEEPTSDVNNEIDATEKQEQDMSEN 213
Query: 246 --AKMLEDKGEEAEKY---------------APKGHLRALIITPTRELALQVTDHLKGVA 288
+ +ED + +E + + L L++TPTRELA+QV H+ VA
Sbjct: 214 EDVEQVEDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQVKHHIDAVA 273
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
K ++ IVGGM+++KQ+RLL RPE+V+ TPGRLWEL+ HL L L V+D
Sbjct: 274 KFTGIKTAIIVGGMASQKQQRLLGRRPEIVIATPGRLWELIGERHPHLCNLRRLRCLVID 333
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRM+E GH+ EL ++++L + + KRQT VFSAT+ L
Sbjct: 334 EADRMVEKGHYAELSQLLELLSEVHYN-------------------PKRQTFVFSATLTL 374
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+L K Q V+ + + +L E+ GM+A ++DLT L E+ I C
Sbjct: 375 IHQAPTRLLQK--KRFQKVDKDSKLVSLMEKIGMKAKPKVIDLTRKQATVETLTETRIHC 432
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
++KD YLYY L + GR++VF SI ++ ++SLL IL + LHA M Q+ RLK
Sbjct: 433 ATDEKDFYLYYFL-LQYPGRSMVFANSIDCIKRLTSLLTILECNPLPLHANMHQKQRLK 490
>gi|428175672|gb|EKX44561.1| hypothetical protein GUITHDRAFT_109675 [Guillardia theta CCMP2712]
Length = 748
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 208/373 (55%), Gaps = 46/373 (12%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E++ WN + L L+K++ F++PT IQ+ IPAA + +D+ GAAETGSGKTLAF L
Sbjct: 186 EYEEWNCVMLRKCLVKALKEQGFEQPTAIQELVIPAAMAKRQDIFGAAETGSGKTLAFAL 245
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
P++QR+L+ + G +A++ L L+++PTRELA+QV DH+ A+
Sbjct: 246 PMLQRILDSHNFS-------GIDAKER----KLAGLVLSPTRELAIQVRDHIVAAARFTK 294
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++VV +VGG+S +KQ+R L P +VVGTPGRLWE M G ++L EL+ L V+DEADR
Sbjct: 295 IKVVAVVGGLSMQKQQRQLAMHPHIVVGTPGRLWEQMRLGNEYLRELNMLLCLVIDEADR 354
Query: 353 MIENGHFRELQSIIDMLPMTN--GSNKGQSEQTQNCVTVSSLQRKK-----------RQT 399
M+E GHF+EL++I+++LP + K +S + + ++S Q K RQT
Sbjct: 355 MMETGHFQELENILNLLPDLDPKAKQKRESNEEEEEEEITSFQATKGSKLHAQRHYRRQT 414
Query: 400 LVFSATIALSADFRKKLKHGSLKSKQSVNG-----LNSIETLSERAGMRANVAIVDLTNM 454
++FSAT+ +R K + ++ SIE L +R + I DLT
Sbjct: 415 MIFSATLIKDIQWRSTKKVKRKEKRKQPETSADVRRQSIERLIDRLQLPEEPVIFDLTPS 474
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
++ K+ + +E + GR I+F +I R I++LL +L I
Sbjct: 475 GKVSEKIAQYRVEWR-----------------GRAILFINAIGEARRIANLLNLLRIRAV 517
Query: 515 TLHAQMQQRARLK 527
LH+ +QQR RLK
Sbjct: 518 LLHSGLQQRQRLK 530
>gi|134117550|ref|XP_772546.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818273|sp|P0CQ91.1|MAK5_CRYNB RecName: Full=ATP-dependent RNA helicase MAK5
gi|50255161|gb|EAL17899.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 772
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 248/471 (52%), Gaps = 43/471 (9%)
Query: 92 SKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESV 151
+ K K+++A EE + +G GD ++ S + +E K ++ ++ +++ E
Sbjct: 89 TSKGKKNAAQEEPNQEGRGDDEKASSASETEEGKKADDKEAVEEDDEEEFPDFAGFAEED 148
Query: 152 AVSNGPDDAEE-ELVNEAEISTEF-DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
N D+ E L +E + + W+ + LHP L +S F PT IQ IPA
Sbjct: 149 L--NAADEEEHPNLDDEPAFNDDLLPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAG 206
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
G+DV+G AETGSGKTLA+ LPI+ LL +R+ A + K L AL+
Sbjct: 207 I-TGRDVVGVAETGSGKTLAYSLPILHYLLGQRKSKAGI-------------KRPLSALV 252
Query: 270 ITPTRELALQVTDHLKGVAKGI-------------NVRVVPIVGGMSTEKQERLLKARPE 316
+ PTRELALQV DHL + K V V +VGG+S +KQ+R+L+ +
Sbjct: 253 LCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILERGCD 312
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
V+V TPGRLW+L+ ++ + TL F V+DEADRMIENGHF EL+SI+ + +
Sbjct: 313 VIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIVKLTQRSTAQQ 372
Query: 377 KGQSE----QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
+ Q + S R+ QT VFSAT LS D +K LK S K ++
Sbjct: 373 GPDDDDPVFQAMATLFEESTAREDMQTFVFSAT--LSKDLQKNLKRRSRSWKGKGKRSST 430
Query: 433 IETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
+E L E+ R N ++DL+ + + L ES IE ++DKD YLYY L + GR+IV
Sbjct: 431 LEDLVEKLDFRDENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFLLRY-PGRSIV 489
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIRKRPKG 542
F SI ++R + LL +L + V+ LH+ +QQ+ RLK + + PKG
Sbjct: 490 FVNSIDSIRRLLPLLTLLQLPVFPLHSHLQQKQRLKNLDRF----KSNPKG 536
>gi|58270130|ref|XP_572221.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818274|sp|P0CQ90.1|MAK5_CRYNJ RecName: Full=ATP-dependent RNA helicase MAK5
gi|57228479|gb|AAW44914.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 772
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 247/471 (52%), Gaps = 43/471 (9%)
Query: 92 SKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESV 151
+ K K+++A EE + +G GD ++ S + +E K ++ ++ +++ E
Sbjct: 89 TSKGKKNAAQEEPNQEGRGDDEKASSASETEEGKKADDKEAVEEDDEEEFPDFAGFAEED 148
Query: 152 AVSNGPDDAEE-ELVNEAEISTEF-DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
N D+ E L +E + + W+ + LHP L +S F PT IQ IPA
Sbjct: 149 L--NAADEEEHPNLDDEPAFNDDLLPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAG 206
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
G+DV+G AETGSGKTLA+ LPI+ LL +R+ A + K L AL+
Sbjct: 207 I-TGRDVVGVAETGSGKTLAYSLPILHYLLGQRKSKAGI-------------KRPLSALV 252
Query: 270 ITPTRELALQVTDHLKGVAKGI-------------NVRVVPIVGGMSTEKQERLLKARPE 316
+ PTRELALQV DHL + K V V +VGG+S +KQ+R+L+ +
Sbjct: 253 LCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILERGCD 312
Query: 317 VVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSN 376
V+V TPGRLW+L+ ++ + TL F V+DEADRMIENGHF EL+SI+ + +
Sbjct: 313 VIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIVKLTQRSTAQQ 372
Query: 377 KGQSE----QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
+ Q + S R+ QT VFSAT LS D +K LK S K ++
Sbjct: 373 GPDDDDPVFQAMATLFEESTAREDMQTFVFSAT--LSKDLQKNLKRRSRSWKGKGKRSST 430
Query: 433 IETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
+E L E+ R N ++DL+ + + L ES IE ++DKD YLYY L + GR+IV
Sbjct: 431 LEDLVEKLDFRDENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFLLRY-PGRSIV 489
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIRKRPKG 542
F SI ++R + L +L + V+ LH+ +QQ+ RLK + + PKG
Sbjct: 490 FVNSIDSIRRLLPLFTLLQLPVFPLHSHLQQKQRLKNLDRF----KSNPKG 536
>gi|451996154|gb|EMD88621.1| hypothetical protein COCHEDRAFT_1181781 [Cochliobolus
heterostrophus C5]
Length = 742
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 206/370 (55%), Gaps = 34/370 (9%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW +L L ++ ++ +L+F EPT IQ + IP G+DVIG A TGSGKTLAFG+PI+
Sbjct: 172 AWAKLDLSEEMLGALAKLKFSEPTDIQASTIPEII-AGRDVIGKASTGSGKTLAFGIPII 230
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL-KGVAKG--IN 292
+ L R A+K +DK P ALII PTRELA Q+ +HL K AKG +
Sbjct: 231 ESYLTRR-AASKDTKDK-------VP----LALIIAPTRELAHQINEHLVKLCAKGEFDS 278
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V+DEADR
Sbjct: 279 PYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISSGQGLLAKFKQIKFLVVDEADR 337
Query: 353 MIENGHFRELQSIIDML-PMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
++ GHF+E+ I+ +L P + E+T RQTLVFSAT D
Sbjct: 338 LLSQGHFKEMDDILKVLEPDDEVDENAEPEETPEA---------NRQTLVFSAT--FGKD 386
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN-VAIVDLTNMCVLANKLEESFIECKE 470
++KL + +N S+E L ++ R +D +A+KL+E IEC
Sbjct: 387 LQRKLAGKAKFGGDQMNQQQSMEYLLKKLRFREEKPKFIDTNPTSQMASKLQEGLIECAG 446
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
+KD YLY +L + + R +VF SI+A+R I+ L L + LH+ M Q+ARL+
Sbjct: 447 PEKDLYLYSLLMFYTKKRALVFTNSISAVRRITPFLTNLNLPALPLHSNMPQKARLR--- 503
Query: 531 QMITWIRKRP 540
I ++RP
Sbjct: 504 -SIERFKERP 512
>gi|405124025|gb|AFR98787.1| ATP-dependent RNA helicase MAK5 [Cryptococcus neoformans var.
grubii H99]
Length = 771
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 204/372 (54%), Gaps = 41/372 (11%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ + LHP L +S F PT IQ IPA G+DV+G AETGSGKTLA+ LPI+
Sbjct: 173 WSSIPLHPALKRSFLASSFTAPTAIQSRAIPAGV-TGRDVVGVAETGSGKTLAYSLPILH 231
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----- 291
LL +R++ A + K L ALI+ PTRELALQV DHL + K
Sbjct: 232 YLLAQRKRKAGI-------------KRPLSALILCPTRELALQVMDHLNALLKHALATSD 278
Query: 292 --------NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
V V +VGG+S +KQ+R+L +V+V TPGRLW+L+ ++ + TL
Sbjct: 279 GEKPQGPPRVSVGSVVGGLSAQKQKRILDRGCDVIVATPGRLWDLIKADDELATNVRTLR 338
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS-------SLQRKK 396
F V+DEADRMIENGHF EL+SI+ +T S Q + V + S R
Sbjct: 339 FLVIDEADRMIENGHFAELESIVK---LTQRSTAQQGPDDNDPVFEAMATLFEESAARDD 395
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMC 455
QT VFSAT LS D +K LK S K +++E L E+ R N ++DL+
Sbjct: 396 MQTFVFSAT--LSKDLQKNLKRRSTSWKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEG 453
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+ + L ES IE + DKD YLYY L + GR+IVF SI ++R + L +L + ++
Sbjct: 454 GVVSSLRESMIESTKADKDLYLYYFLLRY-PGRSIVFVNSIDSIRRLLPLFTLLQLPIFP 512
Query: 516 LHAQMQQRARLK 527
LH+ +QQ+ RLK
Sbjct: 513 LHSHLQQKQRLK 524
>gi|310800598|gb|EFQ35491.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 777
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 212/384 (55%), Gaps = 33/384 (8%)
Query: 157 PDDAEEEL--------VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
PDDA+ E V +A+ + W +L L P L+ +I +L+F +PT IQ + IP
Sbjct: 179 PDDAKLESSGFAALEEVQDADEDLDMTPWVDLGLSPALVAAIAKLKFAKPTNIQSSTIPD 238
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
G DVIG A TGSGKTLAF +PI++ +++ + GE K P AL
Sbjct: 239 IL-AGHDVIGKASTGSGKTLAFSIPIVEEWVDKHDGDGNA---DGERPSK--PDNTPFAL 292
Query: 269 IITPTRELALQVTDHLKGVAKGI--NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLW 326
I++PTRELA Q+T+H+K + G+ V + GG+S KQ+R L A+ ++V+GTPGRLW
Sbjct: 293 ILSPTRELAHQITNHIKNLCAGLLNAPFVCSVTGGLSVFKQQRQL-AKADIVIGTPGRLW 351
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
E++SG + L + + V+DEADR++ GHF+E I+D L ++G+ +
Sbjct: 352 EVISGSRELLAGFRKIRYLVVDEADRLLSEGHFKEAGQILDALDREVIEDEGEDYDNEKG 411
Query: 387 VTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR- 443
++ RQTLVFSAT L K K G + K+ S+E L ++ R
Sbjct: 412 LS-------DRQTLVFSATFHQGLQQKLAGKGKWGLMSEKE------SMEYLLKKLNFRE 458
Query: 444 ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHIS 503
+D+ +A L+E IEC +KD YLY ++ ++ RT+VF SI+A+R ++
Sbjct: 459 EKPKFIDVNPAKQMAAGLKEGLIECGAMEKDLYLYTVILLNPNRRTLVFTNSISAVRRLA 518
Query: 504 SLLKILGIDVWTLHAQMQQRARLK 527
L+ L I+ LH+QM Q+ARL+
Sbjct: 519 PFLQNLNINATALHSQMAQKARLR 542
>gi|342886208|gb|EGU86105.1| hypothetical protein FOXB_03374 [Fusarium oxysporum Fo5176]
Length = 774
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 226/415 (54%), Gaps = 49/415 (11%)
Query: 131 TGKKKKKKKKGKKIKTVEESVA--------VSNGPDDAEEELVNEAEISTEFDAWNELRL 182
+G KK+ ++ K K V++S A +++ D A++E V+ A AW L L
Sbjct: 157 SGTKKEDEQLDKASKVVQKSSARGGNTFGALADANDYADQEDVDMA-------AWVPLNL 209
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
P ++ +I +L+F +PT IQ+ IP G DVIG A+TGSGKTLAFG+P+++R LE +
Sbjct: 210 SPQILSAIAKLKFTKPTLIQEKTIPEILA-GDDVIGKAQTGSGKTLAFGIPMVERWLELQ 268
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--RVVPIVG 300
E+ E+ P A++++PTRELA Q+ DHLK + G+ V + G
Sbjct: 269 EQGV----------ERTGP----MAVVLSPTRELAKQLGDHLKALCDGLPSAPYVCVVTG 314
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
G+S +KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEADR+ + G F+
Sbjct: 315 GLSIQKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIKFLVVDEADRLFKVGQFK 373
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ--------RKKRQTLVFSATIALSADF 412
E + II L +G + G ++ + R RQTLVFSAT D
Sbjct: 374 EAEDIIGAL---DGKSPGDDAESSDEDEDEDEDDDDEEDDDRNARQTLVFSAT--FDKDL 428
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ KL K K + N + L + R +D+ + +A L+E IEC +
Sbjct: 429 QTKLAG---KGKSTGNDEEKMAYLMKCLKFRGEPKFIDVNPVSQMAQGLKEGLIECGAME 485
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
KD YLY +L ++ RT+VF SI+A+R ++ LL L + LH+QM Q+ARL+
Sbjct: 486 KDLYLYTVLLLNPGRRTLVFTNSISAVRRLTPLLSNLNLTALPLHSQMAQKARLR 540
>gi|330926678|ref|XP_003301562.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
gi|311323563|gb|EFQ90355.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
Length = 827
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 229/438 (52%), Gaps = 67/438 (15%)
Query: 141 GKKIKTVEES-----VAVSNGPD-----DAEEELVNEAEISTEF---------------- 174
K+K +EE +A +NG + D EE + E F
Sbjct: 193 EAKLKKLEEEKASAKLAATNGVEKESDGDKEESETEDREDGETFGPGAFDILANQPDDDD 252
Query: 175 -----DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
AW+EL L ++ ++ +L+F +PT IQK+ IP G+DVIG A TGSGKTLA
Sbjct: 253 DEEDVSAWDELELSEEMLGALAKLKFSKPTTIQKSTIPEIL-AGRDVIGKASTGSGKTLA 311
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV-A 288
FG+PI++ L R A+K EDK ALII PTRELA Q+ HL + A
Sbjct: 312 FGIPIIESYLASRSSASKDPEDK-----------MPIALIIAPTRELAHQINAHLIALCA 360
Query: 289 KG--INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
KG + I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L + + F V
Sbjct: 361 KGDFDPPYITSITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISDGQGLLRKFKQIKFLV 419
Query: 347 LDEADRMIENGHFRELQSIIDML-PMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
+DEADR+ GHF+E+ I+ +L P +S++ + KRQTLVFSAT
Sbjct: 420 VDEADRLFSEGHFKEMGEILKVLEPDDVTDENAESDEKEEI---------KRQTLVFSAT 470
Query: 406 IALSADFRKKLKHGSLKSKQS--VNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLE 462
D +KKL G +K S ++ S+E L ++ R + +D M +A+KL+
Sbjct: 471 --FGKDLQKKLA-GKVKGGGSDLMSQQQSMEYLLKKLQFREEKPVFIDANPMSQMASKLQ 527
Query: 463 ESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
E IEC +KD YLY +L + + R +VF SI+A+R I+ L L + LH+ M Q
Sbjct: 528 EGLIECAGTEKDLYLYSLLIFYTKKRALVFTNSISAVRRITPFLTNLALPALPLHSNMPQ 587
Query: 523 RARLKLFSQMITWIRKRP 540
+ARL+ I ++RP
Sbjct: 588 KARLR----SIERFKERP 601
>gi|119193909|ref|XP_001247558.1| hypothetical protein CIMG_01329 [Coccidioides immitis RS]
gi|118574275|sp|Q1E7Y4.1|MAK5_COCIM RecName: Full=ATP-dependent RNA helicase MAK5
gi|392863201|gb|EAS36075.2| ATP-dependent RNA helicase MAK5 [Coccidioides immitis RS]
Length = 783
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 276/562 (49%), Gaps = 78/562 (13%)
Query: 20 RRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGK-----------PGKKLNSKKRKRSSANEEDSGDGDGDGDED 115
EEI+ + I +P G G NS + A + + G GD ED
Sbjct: 64 EEIE----GVDILRPSGGGEIKFKASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSED 119
Query: 116 GSGVQKQEEKNLKN----------------ETGKKKKKKKKGKKIKT---VEESVAVSNG 156
G G + EK +N E K K +G +IKT ++ V+ +
Sbjct: 120 GDGTTLEAEKKAENHGKVNDRRTKTNNSNKEKESNKLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
D+ EE++ + AW+ L L L S+ RL+F PTPIQ ACIPA QG DV
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIPAVL-QGHDV 230
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEERE--KAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
IG A TGSGKTLAFG+PI++ L + +A E++ E A LI++PTR
Sbjct: 231 IGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEERESTKEPMA-------LILSPTR 283
Query: 275 ELALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
ELA Q+ HL + A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 284 ELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGS 342
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSI---IDMLPMTNGSNKGQSEQTQNCVT 388
L +L + F V+DEADR++ GHF+E++ I ID + +T + +SE+
Sbjct: 343 MTGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEP 402
Query: 389 VSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANV 446
+ + RQTLVFSAT L K+++ ++ ++ S+E L + R
Sbjct: 403 DEEKKAEPRQTLVFSATFHKGLQQKLSGKIRY---RNDDLLDKKESMEYLLRKLNFREER 459
Query: 447 A-IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
+D+ + +A L+E ++C DKD LY +L H + RT+VF SI+A+R ++ L
Sbjct: 460 PKFIDVNPISQMAQNLKEGLVQCAPMDKDLLLYTLLLYHPKHRTLVFTNSISAVRRLTQL 519
Query: 506 LKILGIDVWTLHAQMQQRARLK 527
L+ L + + LH+ M Q+ARL+
Sbjct: 520 LQNLNLPTFALHSSMAQKARLR 541
>gi|302407546|ref|XP_003001608.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
gi|261359329|gb|EEY21757.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
Length = 787
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 207/373 (55%), Gaps = 34/373 (9%)
Query: 165 VNEAEISTE---FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
+ EAE TE W L L P + +I RL+F +PT IQ A IP G DVIG A
Sbjct: 211 LEEAEDDTEDLDMSEWMGLNLSPATIATIRRLKFTKPTTIQCAAIPHI-QAGHDVIGKAS 269
Query: 222 TGSGKTLAFGLPIMQRLLEER--EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
TGSGKTLAFG+PI+ + LE+ E+ + M D EA+ AP ALII+PTRELA Q
Sbjct: 270 TGSGKTLAFGIPIVDKWLEKNGEEQDSAMETDDAPEAK--AP----LALIISPTRELAHQ 323
Query: 280 VTDHLKGVAKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
+ +H+K + G++ + V + GG+S KQ+R L A+ ++VVGTPGRLWE++S +
Sbjct: 324 IMNHIKELCAGLSKQPYVCSVTGGLSVYKQQRQL-AKADIVVGTPGRLWEVLSTNTTVME 382
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ + V+DEADR++ GHF+E + I L + EQT + R
Sbjct: 383 SFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTEEDDEDEQTLS----------PR 432
Query: 398 QTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNM 454
QTLVFSAT L K K G + ++ S+E L +R R VD+ +
Sbjct: 433 QTLVFSATFHKGLQQKLAGKGKFGLMSEEE------SMEYLLKRLNFREEKPEFVDVNPV 486
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+A L+E IEC +KD YLY ++ ++ R++VF SI+ +R ++ +L L ++
Sbjct: 487 SQMAEGLKEGMIECGAMEKDLYLYALILLNPNRRSLVFTNSISTVRRLTPMLANLNLNAL 546
Query: 515 TLHAQMQQRARLK 527
LH+QM Q+ARL+
Sbjct: 547 PLHSQMPQKARLR 559
>gi|212529054|ref|XP_002144684.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
gi|210074082|gb|EEA28169.1| ATP dependent RNA helicase, putative [Talaromyces marneffei ATCC
18224]
Length = 770
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 264/506 (52%), Gaps = 64/506 (12%)
Query: 61 GGFLSLEEIDEASYNLQIPKPEKG----------KPGKKLNSKKRKRSSANEEDSGDGDG 110
GGF LEEID + I +PE KP K + K + + E++ + G
Sbjct: 54 GGFFGLEEID----GVDIIRPESSGQIKFKVAADKPTKSILKKTKTTNETPNENTEEWSG 109
Query: 111 DGDEDGSGVQ--KQEEKNLKNETGKKKK----------KKKKGKKIKTVEESVAVSNGPD 158
D + V+ K++++N K+E K+K K+++ KIK + S + + P
Sbjct: 110 FSDAEKQEVKPHKKQKQNKKSEQQKEKSTTDEKKPAATKQQQQPKIKADKSSEKIQSLPF 169
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
A L E E + AW L L P L I +L+F P+ IQ+A IP G DV+G
Sbjct: 170 TA---LEEEEEDEIDVSAWEALGLSPALQTGISKLKFSTPSTIQQAVIPEVL-AGHDVVG 225
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKTLAFG+PI++ L + + E+K ++ ++ P ALI++PTRELA
Sbjct: 226 KASTGSGKTLAFGIPILEYYLNTKGQRDTSKENKKKKKKESQPI----ALILSPTRELAH 281
Query: 279 QVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
Q+ H+ + N R+ + GG++ +KQ+RLL ++V+GTPGR+WE++S G
Sbjct: 282 QLAKHIGALNTHTPAANARIALLTGGLAIQKQQRLLN-DADIVIGTPGRVWEILSSGTGL 340
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT--------NGSNKGQSEQTQNCV 387
+ + + + VLDEADR++ +GH++EL+ I+D L N SN + ++ +
Sbjct: 341 IQRMSGVKYLVLDEADRLLSDGHYKELEEILDALDRKEDNDEADENSSNSEEEDEQKAEA 400
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKH-----GSLKSKQSVNGLNSIETLSERAGM 442
+ + RQTLVFSAT F K L+ G S +N S+E L ++
Sbjct: 401 SAA------RQTLVFSAT------FHKGLQQKLSGKGKFMSSDLMNKTESMEYLLQKLKF 448
Query: 443 RA-NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
R +D+ + +A L+E +EC +KD YLY +L H R ++F SI+++R
Sbjct: 449 REEKPKFIDVNPISQMAQGLKEGILECGAMEKDLYLYTLLLYHPGHRCLLFANSISSVRR 508
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLK 527
+S LL+ LGI LH+ M+Q+ARL+
Sbjct: 509 LSQLLQNLGIPALALHSTMEQKARLR 534
>gi|393212749|gb|EJC98248.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 718
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 212/376 (56%), Gaps = 49/376 (13%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W++ LH L+ +++ +F PTPIQ++ IP A +GKDV+G A+TGSGKTLA+GLPI+
Sbjct: 120 WSDFSLHARLLSALHSQKFATPTPIQRSAIPVAL-KGKDVVGVAQTGSGKTLAYGLPILN 178
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA-------- 288
LL+ M KG K L+AL++ PTRELALQVT+HLK
Sbjct: 179 HLLQ-------MGRPKG--------KRPLQALVLAPTRELALQVTEHLKACVVEDAERRT 223
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
V + +VGGM+ +KQ R+++ +++V TPGRLW+L+ +L TL F VLD
Sbjct: 224 GAPRVSIGTVVGGMAIQKQIRIIERGVDILVATPGRLWDLIEEDNSLSEQLRTLRFLVLD 283
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR----------Q 398
EADRMIE GHF EL +II + + + +S +T + + + Q
Sbjct: 284 EADRMIETGHFAELDNIIRL-----TTRQSKSTETDEAFMFGETETRGKNDESNEETPMQ 338
Query: 399 TLVFSATIALSADFRKKLKHGS-LKSKQSVNG-----LNSIETLSERAGMR-ANVAIVDL 451
T +FSAT LS D ++ LK + +K + G +++++ L R R ++DL
Sbjct: 339 TFIFSAT--LSRDLQQNLKKWKRISNKVTKKGTTDKPVSTLDELLSRLDFRDPEPEVIDL 396
Query: 452 TNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGI 511
+ + + L+ES +EC DKD YLYY L + GR++VF +SI +R + L ++L +
Sbjct: 397 SPEGGIVSTLKESQVECLSADKDVYLYYFL-LRYPGRSLVFLSSIDGIRRLLPLCELLQL 455
Query: 512 DVWTLHAQMQQRARLK 527
+ LH+Q+QQR RLK
Sbjct: 456 HAFPLHSQLQQRQRLK 471
>gi|451851184|gb|EMD64485.1| hypothetical protein COCSADRAFT_37068 [Cochliobolus sativus ND90Pr]
Length = 823
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 216/394 (54%), Gaps = 44/394 (11%)
Query: 153 VSNGP-DDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
++N P DD++EE V+ AW +L L ++ ++ +L+F +PT IQ + IP
Sbjct: 238 LANQPMDDSDEEDVS---------AWGKLDLSEEMLGALAKLKFSKPTNIQTSTIPEII- 287
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
G+DVIG A TGSGKTLAFG+PI++ L R A K +DK P ALII
Sbjct: 288 AGRDVIGKASTGSGKTLAFGIPIIESYLAGR-AAPKDTKDK-------VP----LALIIA 335
Query: 272 PTRELALQVTDHL-KGVAKGI--NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
PTRELA Q+ +HL K AKG + + I GG+S +KQ R L+ + ++VVGTPGRLWE+
Sbjct: 336 PTRELAHQINEHLVKLCAKGDFDSPYIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEV 394
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML-PMTNGSNKGQSEQTQNCV 387
+S G+ L + + F V+DEADR++ GHF+E+ I+ +L P + +T
Sbjct: 395 ISSGQGLLAKFKQIKFLVVDEADRLLSQGHFKEMDDILKVLEPDDEVDENAEPAETPEA- 453
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN-V 446
RQTLVFSAT D ++KL + +N S+E L ++ R
Sbjct: 454 --------NRQTLVFSAT--FGKDLQRKLAGKAKFGGDQMNQQQSMEYLLKKLRFREEKP 503
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
+D +A+KL+E IEC +KD YLY +L + + R +VF SI+A+R I+ L
Sbjct: 504 KFIDANPTSQMASKLQEGLIECAGPEKDLYLYSLLMFYTKKRALVFTNSISAVRRITPFL 563
Query: 507 KILGIDVWTLHAQMQQRARLKLFSQMITWIRKRP 540
L + LH+ M Q+ARL+ I ++RP
Sbjct: 564 TNLNLPALPLHSNMPQKARLR----SIERFKERP 593
>gi|429855665|gb|ELA30611.1| ATP-dependent RNA helicase mak5 [Colletotrichum gloeosporioides
Nara gc5]
Length = 749
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 203/356 (57%), Gaps = 34/356 (9%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L P ++ +I +L+F +P+ IQK+ IP G DVIG A TGSGKTLAF +PI++
Sbjct: 192 WIDLGLSPAIVSAIAKLKFTKPSNIQKSSIPEIL-AGHDVIGKASTGSGKTLAFSIPIVE 250
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR-- 294
+E K GE+ ++AP ALI++PTRELA Q+T+H+K + G+
Sbjct: 251 DWIE------KFDAKDGEKDTEHAPT----ALILSPTRELAHQITNHIKNLCAGLTNAPF 300
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V + GG+S KQ+R L A+ ++V+GTPGRLWE++S + L + + V+DEADR++
Sbjct: 301 VCSVTGGLSVFKQQRQL-AKADIVIGTPGRLWEVISSSTELLSGFKKIRYLVVDEADRLL 359
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI--ALSADF 412
GHF+E I+D L + + E QN RQTLVFSAT L
Sbjct: 360 SEGHFKEAGEILDAL---DREALDEDEDKQNLTP--------RQTLVFSATFHKGLQQKL 408
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRA-NVAIVDLTNMCVLANKLEESFIECKEE 471
K K G + ++S +E L +R R ++D+ + +A L+E IEC
Sbjct: 409 AGKGKWGLMSEEES------MEYLLKRLNFREEKPKLIDVNPVAQMAAGLKEGLIECGAM 462
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L ++ RT+VF SI+A+R ++ L+ L ++ LH+QM Q+ARL+
Sbjct: 463 EKDLYLYTVLLLNPNRRTLVFTNSISAVRRLTPFLQNLNLNALALHSQMPQKARLR 518
>gi|409076944|gb|EKM77312.1| hypothetical protein AGABI1DRAFT_43493, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 670
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 206/422 (48%), Gaps = 99/422 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W LHP L+ ++YR F+ PT IQ A IP A +GKDV+G A+TGSGKTLA+G+PI+
Sbjct: 5 WASYSLHPQLLHALYRKGFESPTSIQAAAIPVAV-KGKDVVGVAQTGSGKTLAYGIPILH 63
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH------LRALIITPTRELALQVTDHLKGV--- 287
LL + P+ H ++ALI+ PTRELALQV+ HL
Sbjct: 64 YLLSQ-------------------PRPHPNKRRPVKALILAPTRELALQVSSHLNECLNP 104
Query: 288 ----------------AKGIN-------------------------VRVVPIVGGMSTEK 306
A+G N V V IVGGMS +K
Sbjct: 105 TDRDTSATQNENNPDEAQGKNEPTGNQKGKRKKAVHNLPVKKRPPHVSVAAIVGGMSAQK 164
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
Q R++ +V+VGTPGRLW+++ + EL L F VLDEADRMIE+GHF EL++I+
Sbjct: 165 QRRIIDRGVDVLVGTPGRLWDIIGEDDSLAKELKNLRFLVLDEADRMIESGHFAELENIL 224
Query: 367 --------------DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
D +P+ + + + Q TV L QT V SAT LS D
Sbjct: 225 RLTLREDRCDVWRGDEIPVEYNAMDTNTNEEQKPNTVYDL-----QTFVLSAT--LSKDL 277
Query: 413 RKKLK-------HGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
++ LK + K K + L I+DL+ + + L+E+
Sbjct: 278 QRNLKKRWRPKDYKKRKGKNDKPATTLDDLLLRLDFRDPEPEIIDLSPEGKVVSTLQEAK 337
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
IEC +KD YLYY L H GR++VF +SI +R + LL +L I V+ LH+Q++QR R
Sbjct: 338 IECLVNEKDTYLYYFLLRH-PGRSLVFLSSIDGVRRLMPLLGLLSIKVFPLHSQLEQRQR 396
Query: 526 LK 527
LK
Sbjct: 397 LK 398
>gi|170100044|ref|XP_001881240.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643919|gb|EDR08170.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 616
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 205/389 (52%), Gaps = 55/389 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W++ LHP L ++++ F PTPIQ+A +P A G+DVIG A+TGSGKTLA+GLPI+
Sbjct: 31 WHKYSLHPQLSRALHAKSFLSPTPIQEAALPMAL-AGRDVIGVAQTGSGKTLAYGLPILH 89
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----- 291
+L + + + K K LRAL++ PTRELALQV+ HL + +
Sbjct: 90 HILSQPKPSPKT-------------KRPLRALVLAPTRELALQVSSHLNALLNHLEDFSS 136
Query: 292 ------------------------NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
+V V IVGGMS++KQ R+L +V++ TPGRLW+
Sbjct: 137 EKTVKNSSKPATTDGKTPAKKPPPHVSVAAIVGGMSSQKQRRILDRGVDVLIATPGRLWD 196
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG--SNKGQSEQTQN 385
LM + E+ + F VLDEADRMIE GHF EL++I+ + + ++ G+ +
Sbjct: 197 LMEDDDTLAREIKNIRFLVLDEADRMIEAGHFAELENILRLTLRESACFNDDGEPIHVEE 256
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKL-------KHGSLKSKQSVNGLNSIETLSE 438
+ +++ QT VFSAT LS D ++ L + + L
Sbjct: 257 EDSKEGIKKDDLQTFVFSAT--LSKDLQRNLKKRSKSKGSKKHYKRNEAPASTLDDLLLR 314
Query: 439 RAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAA 498
+ ++DL+ + L + L+E I+C DKD YLYY L + GR++VF +SI
Sbjct: 315 LDFRDPDPEVIDLSPVGGLVSTLQEGRIDCLSADKDVYLYYFL-LRYPGRSLVFLSSIDG 373
Query: 499 LRHISSLLKILGIDVWTLHAQMQQRARLK 527
+R + L+++L + + LH+Q++QR RLK
Sbjct: 374 IRRLMPLVELLNVKAFPLHSQLEQRQRLK 402
>gi|346970819|gb|EGY14271.1| ATP-dependent RNA helicase MAK5 [Verticillium dahliae VdLs.17]
Length = 700
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 207/373 (55%), Gaps = 32/373 (8%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
EE ++AE + W L L P + +I RL+F +PT IQ IP G DVIG A
Sbjct: 125 EEAEDDAE-DLDMSEWMGLNLSPATIATIRRLKFTKPTTIQSTAIPHI-QAGHDVIGKAS 182
Query: 222 TGSGKTLAFGLPIMQRLLEER--EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
TGSGKTLAFG+PI+ + LE+ E+ + M D EA+ AP ALII+PTRELA Q
Sbjct: 183 TGSGKTLAFGIPIVDKWLEKNGEEQESAMETDDAPEAK--AP----LALIISPTRELAHQ 236
Query: 280 VTDHLKGVAKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
+ +H+K + G++ + V + GG+S KQ+R L A+ ++VVGTPGRLWE++S +
Sbjct: 237 IMNHIKDLCAGLSKQPYVCSVTGGLSVYKQQRQL-AKADIVVGTPGRLWEVLSTNMTVME 295
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ + V+DEADR++ GHF+E + I L + EQT + R
Sbjct: 296 SFKKIQYLVVDEADRILSEGHFKEAEEIFKALDRNVTEEDDEDEQTLS----------PR 345
Query: 398 QTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNM 454
QTLVFSAT L K K G + ++S +E L +R R VD+ +
Sbjct: 346 QTLVFSATFHKGLQQKLAGKGKFGLMSEEES------MEYLLKRLNFREEKPEFVDVNPV 399
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+A L+E IEC +KD YLY ++ ++ R++VF SI+ +R ++ +L L ++
Sbjct: 400 SQMAKGLKEGMIECGAMEKDLYLYALILLNPNRRSLVFTNSISTVRRLTPMLANLNLNAL 459
Query: 515 TLHAQMQQRARLK 527
LH+QM Q+ARL+
Sbjct: 460 PLHSQMPQKARLR 472
>gi|91207158|sp|Q4WMS3.2|MAK5_ASPFU RecName: Full=ATP-dependent RNA helicase mak5
Length = 777
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 213/373 (57%), Gaps = 28/373 (7%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
E + + AW+ L L P ++ + +++F PT +Q+ACIP +G DVIG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR-ALIITPTRELALQVTDH- 283
KTLAFG+PI++ LE++ +D + E+ + K ALI++PTRELA Q++ H
Sbjct: 251 KTLAFGIPILEHYLEKKR------DDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHI 304
Query: 284 --LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
L A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ F V+DEADR++ GHF+E++ I++ L E S +RQTLV
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGED--QASEEESDPSSERQTLV 421
Query: 402 FSATIALSADFRKKL------KHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNM 454
FSAT D ++KL G + K+ S++ L ++ R +D+ +
Sbjct: 422 FSAT--FHRDLQQKLAGKRKWTRGDIMDKK-----ESMDYLLQKLNFREEKPKFIDMNPI 474
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+A+ L+E +EC +KD +LY +L H + RT+VF SI+A+R ++ LL+ L +
Sbjct: 475 SQMADNLKEGIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLTKLLQTLQLPAL 534
Query: 515 TLHAQMQQRARLK 527
LH+ M Q+ARL+
Sbjct: 535 ALHSSMAQKARLR 547
>gi|145244675|ref|XP_001394643.1| ATP-dependent RNA helicase mak5 [Aspergillus niger CBS 513.88]
gi|143345221|sp|A2QWW0.1|MAK5_ASPNC RecName: Full=ATP-dependent RNA helicase mak5
gi|134079333|emb|CAK96962.1| unnamed protein product [Aspergillus niger]
gi|350631401|gb|EHA19772.1| hypothetical protein ASPNIDRAFT_178721 [Aspergillus niger ATCC
1015]
Length = 766
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW L L P ++ S+ +++F PT +QK+CIP G DVIG A TGSGKTLAFG+PI+
Sbjct: 193 AWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQIL-DGHDVIGKASTGSGKTLAFGIPIL 251
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA---KGIN 292
+ LE+R + + K E+ + AP ALI++PTRELA Q+ H+ +A G N
Sbjct: 252 EHYLEKRRQ--DLRAGKEEKKKDTAPI----ALIMSPTRELAHQLAKHIGELALHAPGSN 305
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
R+ + GG+S +KQ+R+L A ++V+GTPGR+WE++S G+ + ++ + F V+DEADR
Sbjct: 306 ARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSEIKFLVIDEADR 364
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ GHF+E + I+ L N G E + R +RQTLVFSAT D
Sbjct: 365 LLSEGHFKEAEEILGALDRVEEGNFGGEESEDEEKEDA---RSERQTLVFSAT--FHRDL 419
Query: 413 RKKLKHGSLKSKQSV-NGLNSIETLSERAGMRAN-VAIVDLTNMCVLANKLEESFIECKE 470
++KL + + + + S+E L ++ R +D+ + +A L+E +EC
Sbjct: 420 QQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEGIVECGA 479
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + + RT+VF SI+A+R ++ LL+ LG+ LH+ M Q+ARL+
Sbjct: 480 MEKDLYLYTLLLYNPKHRTLVFTNSISAVRRLTQLLQNLGLPALALHSSMAQKARLR 536
>gi|17507641|ref|NP_491652.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
gi|351063669|emb|CCD71883.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
Length = 746
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 200/362 (55%), Gaps = 37/362 (10%)
Query: 172 TEFDAWNELRLHP-LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
T+ AW + P ++++I ++ F EPT IQ A +PAA +DV+GAAETGSGKTLAF
Sbjct: 151 TDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAF 210
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
G+P++ RLLE D +E E +G RALI+ PTREL +Q+ H+ +
Sbjct: 211 GIPLVARLLES--------SDDSQETESTEVRGP-RALIVAPTRELVIQIMKHINALIST 261
Query: 291 INVRVVPIVGGMSTEKQERLL-KARPEVVVGTPGRLWELMSGGE--KHLVELHTLSFFVL 347
+ IVGG++ KQER++ + RP++VV TPGRLW +M E + L E L V+
Sbjct: 262 TQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVV 321
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DE DRM+E G+F EL I+ NK E +++K QTLVFSAT+
Sbjct: 322 DETDRMVEEGYFAELTHIL---------NKIHEES----------EKEKLQTLVFSATLT 362
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANV-AIVDLTNMCVLANKLEESFI 466
+ + + K + ++ I+ L + G+R N ++DLT A L E+ I
Sbjct: 363 FAK--AQDVAEEEKKKAKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARI 420
Query: 467 ECKE-EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
C +KD L Y+L+ + GRTIVF SI A R + S+LK + ID LHA+M Q+ R
Sbjct: 421 NCGNLLEKDTSLVYLLTRYP-GRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQR 479
Query: 526 LK 527
LK
Sbjct: 480 LK 481
>gi|313238237|emb|CBY13329.1| unnamed protein product [Oikopleura dioica]
Length = 598
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 202/381 (53%), Gaps = 74/381 (19%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
EE A+SN +E + W L L+++I L FK PT IQ+ CIP
Sbjct: 123 EEEKAISN----------SEYVFQNKLPEWRRFNLDVALLRAIDSLGFKSPTDIQRQCIP 172
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
+ K ++GAAETGSGKT+A+GLPI+Q+++ + + E + P+ A
Sbjct: 173 KGLNSKKTILGAAETGSGKTIAYGLPILQKIIGYLDFS---------EEKTVGPQ----A 219
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL-KARPEVVVGTPGRLW 326
LI+ PTRELA+QV D ++ V+K +V+ IVGGM+ EKQ+R+L K RPE++V TPGR W
Sbjct: 220 LILCPTRELAMQVHDSIRLVSKFTSVKTTAIVGGMAAEKQQRVLSKIRPEIIVATPGRFW 279
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
EL G+++L L ++ +FV+DEADRM E GHF EL I+ L
Sbjct: 280 ELRETGQEYLQNLRSIKYFVVDEADRMAEKGHFAELDKIVGTLS---------------- 323
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANV 446
++ Q VFSAT+ L+ ++ +K++ + + + + M+A V
Sbjct: 324 --------RESQKFVFSATLTLTHVNSDRMDRMKIKTETTKSKIKKL--------MKAIV 367
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
+ LT E+DKD +LY++L +GR+IVFC SI + + LL
Sbjct: 368 KVSILT-----------------EKDKDLWLYFMLKKQ-EGRSIVFCNSITGVLRLRGLL 409
Query: 507 KILGIDVWTLHAQMQQRARLK 527
L + V +LHA ++Q+ RLK
Sbjct: 410 DTLKLPVRSLHANLKQKQRLK 430
>gi|443706484|gb|ELU02510.1| hypothetical protein CAPTEDRAFT_152919 [Capitella teleta]
Length = 608
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 147/389 (37%), Positives = 205/389 (52%), Gaps = 54/389 (13%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW L + +M ++ F +PTPIQ +PAA +D++GAA TGSGKTLAF +P
Sbjct: 1 MSAWMNLFVPEKVMLALGEQNFVQPTPIQIESLPAAIRDRRDIVGAAHTGSGKTLAFAIP 60
Query: 234 IMQRLLEEREKAAKMLEDK-------------------------GEEAEKYAPKGH---- 264
I+ +++ +E A L + G+E + +
Sbjct: 61 ILNGIMKLKEAAENELNQQLDGEEENEDDEILDEEEPEESAESDGDEEVEEKAEAESSEE 120
Query: 265 ---LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGT 321
L ALI+TPTRELA+QV +H++ AK + + +VGGMS +KQERLL+ PE+VV T
Sbjct: 121 TKPLYALILTPTRELAIQVKNHIEAAAKYTGITCMAVVGGMSVQKQERLLRRGPEIVVAT 180
Query: 322 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE 381
PGRLWEL S HL ++ + F VLDEADRM+E GHF EL+ I+ G+ +E
Sbjct: 181 PGRLWELYSELSNHLSKMPKIRFLVLDEADRMVEKGHFEELEKIL-------GTINSDAE 233
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN---SIETLSE 438
K+RQT VFSAT+ + ++L K K V L+ +E L
Sbjct: 234 -----------NEKRRQTFVFSATLTYTHKAPERLFMQKKKKKLKVTELSIEKKLEVLMG 282
Query: 439 RAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAA 498
+ GMR I+DLT A L E+ I C +++D YLYY+L + Q RT+VFC S
Sbjct: 283 QVGMRERPKIIDLTEKQRTAETLTEARINCSAKERDLYLYYLLQQYPQ-RTLVFCNSKDC 341
Query: 499 LRHISSLLKILGIDVWTLHAQMQQRARLK 527
+R + S+ +L LHA MQQR RLK
Sbjct: 342 IRRLISIFTLLKCCPLPLHADMQQRQRLK 370
>gi|171682200|ref|XP_001906043.1| hypothetical protein [Podospora anserina S mat+]
gi|170941059|emb|CAP66709.1| unnamed protein product [Podospora anserina S mat+]
Length = 761
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 213/377 (56%), Gaps = 37/377 (9%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
PD EE V+ +E W L L P L+ +I L+F +PTPIQ IP + G DV
Sbjct: 176 PDIEPEEDVDTSE-------WAPLELSPDLVAAIGNLRFGKPTPIQARAIPEIIN-GHDV 227
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
IG A TGSGKTLAFG+PI+++ L AK E G E EK H A+I++PTREL
Sbjct: 228 IGKASTGSGKTLAFGIPIVEKWL------AKQAE--GNEDEKK----HPIAMILSPTREL 275
Query: 277 ALQVTDHLKGVAKGI--NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
A Q++DHLK ++ G+ + + + GG++ +KQ R L+ + ++++GTPGRLWE++S
Sbjct: 276 AHQISDHLKKLSDGLTESPYICSVTGGLAIQKQLRQLE-KADIIIGTPGRLWEVISTEIA 334
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
+ + + F V+DEADR++++G F+E + II L T G+ + + +
Sbjct: 335 VMNSIRQIDFLVVDEADRLLKDGQFKEAEDIIKALDRTR---PGEEAEEDSDSDEEPTPK 391
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN---SIETLSERAGMR-ANVAIVD 450
RQTLVFSAT F K L+ L K N + S+E L ++ R A +D
Sbjct: 392 HNRQTLVFSAT------FNKALQQ-KLAGKARYNLMGEAESLEHLLKKLNFREAKPKFID 444
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
+ +A+KL+E I C + +KD YLY +L + R +VF +I +R ++ L+ LG
Sbjct: 445 ANPVSQMADKLKEGLIHCGDLEKDLYLYAVLLLQPTRRALVFTNAINTVRRLTPFLQNLG 504
Query: 511 IDVWTLHAQMQQRARLK 527
+ +LH+ M+Q+ARL+
Sbjct: 505 LPAISLHSDMEQKARLR 521
>gi|452848186|gb|EME50118.1| hypothetical protein DOTSEDRAFT_165107 [Dothistroma septosporum
NZE10]
Length = 743
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 167/481 (34%), Positives = 256/481 (53%), Gaps = 49/481 (10%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGD------GDED 115
GF LEEI+ ++ + + E G + + SS + EDS +G+ G ED
Sbjct: 49 GFFGLEEIE----DVDVVRHESGT----IAFHSKVASSQDAEDSNGANGEEKDSWSGFED 100
Query: 116 GSGVQKQEEKNLKNETGKKKKKKK-KGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEF 174
+G K++K K++ K K K K + + S E+ +EAE S +
Sbjct: 101 DAGDDAPLAKSVKVTKAKQESKSKTKSKPADKAGKETSTSGVFSGLAEDAGDEAE-SVDV 159
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
AW L+L P M S+ +L+F +PTP+Q+A IP + G DV+G A TGSGKT AFG+PI
Sbjct: 160 SAWRSLKLSPDTMASLSKLKFSKPTPVQQAVIPEVLN-GHDVVGKASTGSGKTFAFGIPI 218
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--- 291
++R LE AA+ K + E AP ALI++PTRELA Q+ HL + +
Sbjct: 219 LERYLE---AAAR----KSRKGEGKAP----LALILSPTRELAHQLDHHLTALFSEVLSS 267
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+ + GG+S KQ+RLL+ +V++GTPGRLWE++S G+ L + F V+DEAD
Sbjct: 268 KPSIATLTGGLSLLKQQRLLR-DADVLIGTPGRLWEIISSGQGIGAALKQIEFLVVDEAD 326
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
R++ G+F+E++ I++ L T+ +++ + S RQTLVFSAT
Sbjct: 327 RLLSQGNFKEVEDILNTLDRTD------TDEDKKETNNSGPDSHSRQTLVFSAT------ 374
Query: 412 FRKKLKH---GSLKSKQSVNGLN-SIETLSERAGMRANVA-IVDLTNMCVLANKLEESFI 466
F + L++ G+ K K + G ++E L + R +D+ +A L+E +
Sbjct: 375 FDRGLQNKLVGNFKYKDDLLGTKETLEYLLSKLNFREKPPKFIDMNPTKQMATGLKEGMV 434
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
EC +KD YLY +L + R IVF SI A+R I+ LL+ L ++ LH+ M Q+ARL
Sbjct: 435 ECGGTEKDLYLYALLLLKQAKRAIVFANSIDAVRRITPLLQNLRLNALPLHSGMIQKARL 494
Query: 527 K 527
+
Sbjct: 495 R 495
>gi|350286853|gb|EGZ68100.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 777
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 196/354 (55%), Gaps = 31/354 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P ++ SI +L+F +PT IQ IP G DVIG A TGSGKTLAFG+P+++
Sbjct: 208 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEI-MAGHDVIGKASTGSGKTLAFGIPVIE 266
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
L E + E++ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 267 SWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPTAPY 316
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 317 ICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLL 375
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
++GHF+E + I L + + E+ N KRQTL+FSAT F K
Sbjct: 376 KDGHFKEAEEIFKALDRPPEEEEEEEEEHVN----------KRQTLIFSAT------FNK 419
Query: 415 KLKHG-SLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
L+ + KSK +E L ++ R VD + +A L+E I C + +K
Sbjct: 420 NLQQKLAGKSKFKATSTQDMEYLLQKLNFRETPKFVDANPVHQMAENLKEGLIMCGDMEK 479
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
D YLY L + R +VF S+ ++R ++ LL+ L + + LH+ M Q+ARL+
Sbjct: 480 DLYLYATLMLQPTRRALVFTNSVNSVRRLTPLLENLNLPAFPLHSGMIQQARLR 533
>gi|242764605|ref|XP_002340809.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218724005|gb|EED23422.1| ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 765
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 250/496 (50%), Gaps = 48/496 (9%)
Query: 61 GGFLSLEEIDEASYNLQIPKPEK-GKPGKKLNSKKRKRSSANEEDSGD-GDGDGDEDGSG 118
GGF LEEID + I KPE G+ K+ + K +S + + D D E+ SG
Sbjct: 53 GGFFGLEEID----GVDIIKPESSGQIKFKVAADKPTKSILKKTEHADETPNDNIEEWSG 108
Query: 119 VQKQEEKNLK----------NETGKKKKKKKKGKKIKTVEESVAVSNG--PDDAEEELVN 166
EE+ ++ +E K+K + K E+ + G PD+ + L
Sbjct: 109 FSDGEEQEVEAQKKQKTKKKSEYAKQKNPADEKKPAAKKEQRQPNAKGGKPDEKIQSLPF 168
Query: 167 EA-----EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
A E + AW+ L L P L S+ +L+F P+ IQ+A IP G DV+G A
Sbjct: 169 TALDEEVEDEVDVSAWDSLGLSPALQTSLSKLKFSTPSTIQQAVIPEVL-AGHDVVGKAS 227
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TGSGKTLAFG+PI++ L R + E K +E++ A LI++PTRELA Q+
Sbjct: 228 TGSGKTLAFGIPILEYYLGTRGQHGTPKEKKKKESQPIA-------LILSPTRELAHQLA 280
Query: 282 DH---LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
H L N R+ + GG++ +KQ+RLL A ++V+GTPGR+WE++S G +
Sbjct: 281 KHIGTLNSHTPAANARIALLTGGLAIQKQQRLL-ADADIVIGTPGRVWEILSSGTGLIQR 339
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT-NGSNKGQSEQTQNCVTVSSLQRKKR 397
+ + + VLDEADR++ +GH++EL+ I+D L + S R
Sbjct: 340 MSRVKYLVLDEADRLLSDGHYKELEEILDALDRKEDNEEAEDSPSESEEDEEKEDATVAR 399
Query: 398 QTLVFSATIALSADFRKKLKH-----GSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDL 451
QTLVFSAT F K L+ G S +N S+E L + R +D+
Sbjct: 400 QTLVFSAT------FHKGLQQKLSGKGKFMSSDLMNKSESMEYLLRKLKFREEKPKFIDV 453
Query: 452 TNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGI 511
+ +A L+E +EC KD YLY +L H R +VF SI+++R +S LL+ LGI
Sbjct: 454 NPISQMAQGLKEGILECGAIQKDLYLYTLLLYHPNHRCLVFANSISSVRRLSQLLQNLGI 513
Query: 512 DVWTLHAQMQQRARLK 527
LH+ M+Q+ARL+
Sbjct: 514 PALALHSSMEQKARLR 529
>gi|449544539|gb|EMD35512.1| hypothetical protein CERSUDRAFT_139322 [Ceriporiopsis subvermispora
B]
Length = 783
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 222/435 (51%), Gaps = 77/435 (17%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
P++ + V ++ W E LHP L +++Y +F +PTPIQ +P A QG+D+
Sbjct: 117 PNNEDATQVPPFDVENLLPNWREFSLHPQLNRAVYAQKFSKPTPIQAEALPLA-MQGRDI 175
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
+G AETGSGKTLA+GLPI+Q LL E A + G + +RALI+ PTREL
Sbjct: 176 VGVAETGSGKTLAYGLPILQLLLTE----ASVSGTSGRPGRR-----PVRALILAPTREL 226
Query: 277 ALQVTDHL---------------------------------KGVAKGINVR--------- 294
ALQV+ HL K AKG N R
Sbjct: 227 ALQVSTHLNACLNSVEGLASEDAQNVKQEETDTSPVTKGKGKARAKGKNARKQDSSTSTS 286
Query: 295 -------------VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
V IVGGMS +KQ+R+L +V+V TPGRLW+++ + ++
Sbjct: 287 SGAAKSKPPPLVSVAAIVGGMSAQKQKRILSRGVDVLVATPGRLWDIIQEDNELADQIEN 346
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDM---LPMTNGSNKGQSEQTQNCV----TVSSLQR 394
L F VLDEADRMIE GHF E+ +I+ + P +G+ + + V + +++
Sbjct: 347 LRFLVLDEADRMIETGHFAEMDNILRLTMRFPKEDGAESEPATGLEGSVEPEESKEGVKK 406
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI--ETLSERAGMRANVAIVDLT 452
QT VFSAT LS D ++ LK K+ + S + L A+ A++D++
Sbjct: 407 GDLQTFVFSAT--LSKDLQRNLKRRQRPKKRKNDKPASTLDDLLLRLDFRDASPAVIDIS 464
Query: 453 NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
+ + L+ES +EC DKDAYLYY L + GRT+VF +SI +R + L+ +LG+
Sbjct: 465 PVGGVVATLQESKVECLASDKDAYLYYFL-LRYPGRTLVFLSSIDGIRRLLPLMDLLGLP 523
Query: 513 VWTLHAQMQQRARLK 527
+ LH+Q++QR RLK
Sbjct: 524 AFPLHSQLEQRQRLK 538
>gi|393245470|gb|EJD52980.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 736
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 208/391 (53%), Gaps = 37/391 (9%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
E V + + W LH L +++ +F PT IQ IP A +G+D+IG AE
Sbjct: 122 EPFVTAFDTKGQLPEWAPFNLHAQLAAALHHKKFASPTSIQSQAIPKAV-EGRDIIGVAE 180
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TGSGKTLA+GLPI+ LL + + KG +RAL++ PTRELALQV
Sbjct: 181 TGSGKTLAYGLPILHHLL----TTPRPPKSKGRRP--------VRALVLAPTRELALQVA 228
Query: 282 DHLK------------------GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPG 323
HLK G AK V V IVGGMS +KQ R+L+ +V+V TPG
Sbjct: 229 AHLKACLVDPIKKEEDTDDKPKGPAKPPAVSVAAIVGGMSAQKQRRVLERGVDVLVATPG 288
Query: 324 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQT 383
RLW+++S + +++ L F VLDEADRMI+ GHF EL +I+ + + + +
Sbjct: 289 RLWDILSEDDALALQIKRLKFLVLDEADRMIQAGHFAELDNILKLTVRVDMPEEDAHDAL 348
Query: 384 QNCVTVSSLQRKKR--QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAG 441
++ SS + K QT VFSAT LS D ++ LK K + + L
Sbjct: 349 EDFKKASSAEGKNEDVQTFVFSAT--LSKDLQRNLKKRKYLGKGNKTS-TLDDLLLRLDF 405
Query: 442 MRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
++ I+DL+ + L+ES IEC DKDAYLYY L + GRT+VF +SI LR
Sbjct: 406 RDSDPEIIDLSPEGGVVAGLQESKIECLVTDKDAYLYYFL-LRYPGRTLVFLSSIDGLRR 464
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ LL++L + + LH+++QQ+ RLK +
Sbjct: 465 LAPLLELLQLKSFVLHSELQQKQRLKTLDRF 495
>gi|396475407|ref|XP_003839779.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
gi|312216349|emb|CBX96300.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
Length = 826
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 218/385 (56%), Gaps = 34/385 (8%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
A++ + ++ E+ + AW EL L ++ ++ +L F++PT IQ + IP G+DVIG
Sbjct: 236 ADQPIDDDDEV--DVSAWEELNLSEQVLDALAKLNFQKPTEIQASTIPEIM-AGRDVIGK 292
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
A TGSGKTLAFG+PI++ L A L+D ++ + P ALI+ PTRELA Q
Sbjct: 293 ASTGSGKTLAFGIPIIESFL----SAQPGLKD----SKDHTPI----ALIVAPTRELAHQ 340
Query: 280 VTDHLKGVA-KG-INV-RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
+T HL + KG N + I GG+S +KQ R L+ + ++VVGTPGRLWE++S G+ L
Sbjct: 341 ITAHLIALCTKGDFNAPHIASITGGLSVQKQRRQLE-KADIVVGTPGRLWEVISTGQGLL 399
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
+ + F V+DEADR++ +GH++EL I+ +L + + G+++ +
Sbjct: 400 EKFKQIRFLVIDEADRLLSDGHYQELGDILKILEPDSEAVDGENDDATPELN-------- 451
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMC 455
RQTLVFSAT S ++KL S K ++ S+E L ++ R +D
Sbjct: 452 RQTLVFSATFGKS--LQQKLAGKSRPDKAEMSQQASMEYLLKKLKFREEKPKFIDANPNS 509
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+ANKL+E IEC +KD YLY +L + + R +VF SI+A+R ++ L L +
Sbjct: 510 QMANKLKEGLIECAGPEKDLYLYSLLMFYSKKRALVFTNSISAVRRLTPYLCNLDLPALP 569
Query: 516 LHAQMQQRARLKLFSQMITWIRKRP 540
LH+ M Q+ARL+ I ++RP
Sbjct: 570 LHSNMAQKARLR----SIERFKERP 590
>gi|307104921|gb|EFN53172.1| hypothetical protein CHLNCDRAFT_25981 [Chlorella variabilis]
Length = 459
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 167/263 (63%), Gaps = 24/263 (9%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
LRALI+ PTRELALQV +HL+ V KG + VVPIVGG+S KQERLL PEVVV TPGR
Sbjct: 4 LRALILAPTRELALQVCEHLQAVGKGCGIWVVPIVGGISALKQERLLAKHPEVVVATPGR 63
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
L +LM G HL L LSF V+DEADRM++ GH+ EL SI+ +P
Sbjct: 64 LLDLMRAGHAHLTHLSRLSFLVIDEADRMVQQGHYGELSSILGAIPRRQ----------- 112
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRA 444
Q+ + QT VFSAT+ L A R++L+ G + S + +++L ++ R
Sbjct: 113 --------QQARLQTFVFSATLTLPASLRRRLRKGGGGASGSSD----LDSLMDKIPFRG 160
Query: 445 NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
IVDLT+ LA+K+EE+++ C E+++D YLY +L+ H GRTIVF +I+++R + +
Sbjct: 161 KPKIVDLTSQRRLADKVEEAYLACGEDERDEYLYCLLTKH-PGRTIVFVNAISSVRRLGA 219
Query: 505 LLKILGIDVWTLHAQMQQRARLK 527
+LK+LG+ LHA MQQR RL+
Sbjct: 220 ILKLLGVKALPLHAGMQQRQRLR 242
>gi|321261600|ref|XP_003195519.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317461993|gb|ADV23732.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 772
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 208/389 (53%), Gaps = 39/389 (10%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
PD +E N+ + W+ + LHP L +S F PT IQ IPA G+DV
Sbjct: 158 PDSDDEPAFNDDLLPE----WSSISLHPALKRSFLASSFTAPTAIQSRAIPAGI-TGRDV 212
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
+G AETGSGKTLA+ LPI+ LL +R+ A + K L AL++ PTREL
Sbjct: 213 VGVAETGSGKTLAYALPILHYLLGQRKLRAGI-------------KRPLSALVLCPTREL 259
Query: 277 ALQVTDHLKGVAKGI-------------NVRVVPIVGGMSTEKQERLLKARPEVVVGTPG 323
ALQV DHL + K + V +VGG+S +KQ+R+L +V++ TPG
Sbjct: 260 ALQVMDHLNALLKHALATSDGEKPQGPPRISVGSVVGGLSAQKQKRILDRGCDVIIATPG 319
Query: 324 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE-- 381
RLW+L+ ++ + TL F V+DEADRMIENGHF EL+SI+ + + +
Sbjct: 320 RLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIVKLTQRSTVKQGPDDDDP 379
Query: 382 --QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSER 439
Q + S+ R QT VFSAT LS D + LK S K +++E L E+
Sbjct: 380 VFQAMATIFEESVARDDMQTFVFSAT--LSKDLQTNLKRRSRSWKGKGKRSSTLEDLVEK 437
Query: 440 AGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAA 498
R N ++DL+ + + L ES IE + DKD YLYY L + GR+I+F SI +
Sbjct: 438 LDFRDENPEVIDLSPEGGVVSSLRESMIESTKADKDLYLYYFLLRY-PGRSIIFVNSIDS 496
Query: 499 LRHISSLLKILGIDVWTLHAQMQQRARLK 527
+R + L +L + ++ LH+ +QQ+ RLK
Sbjct: 497 IRRLLPLFTLLQLPIFPLHSHLQQKQRLK 525
>gi|389641713|ref|XP_003718489.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|374095422|sp|A4REU9.2|MAK5_MAGO7 RecName: Full=ATP-dependent RNA helicase MAK5
gi|351641042|gb|EHA48905.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|440476884|gb|ELQ58053.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae P131]
Length = 760
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 205/371 (55%), Gaps = 37/371 (9%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
++E + + W L L +M SI +L+F +PT IQ A IP G DV+G A TGS
Sbjct: 177 IDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEIL-AGHDVVGKASTGS 235
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAFG+PI+++ L A + E E P AL+++PTRELA Q+TDH+
Sbjct: 236 GKTLAFGIPIVEKWLSIN---ASTQSKRVAEGETKTPI----ALVLSPTRELAHQLTDHI 288
Query: 285 KGVAKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
K + G+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S K + +
Sbjct: 289 KNLCAGLATSPYVCSVTGGLSVHKQQRQLE-KADIVVGTPGRLWEVLSSSTKLIQAFRGI 347
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR--KKRQTL 400
F V+DEADR++ GHF++ + I + L + G + R K RQTL
Sbjct: 348 KFLVVDEADRLLSEGHFKDAKDIFEGLDKVETDDDG-------------IIRGGKARQTL 394
Query: 401 VFSATIALSADFRKKLKH---GSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCV 456
VFSAT F K L+ G + + + S+E L ++ R + +D+ +
Sbjct: 395 VFSAT------FNKGLQQKLAGKGRFDLATDS-QSMEYLLKKLKFREEIPKFIDVNPVSQ 447
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
+A L+E +EC +KD YLY +L +H RT+VF SI+++R ++ +L+ L + V L
Sbjct: 448 MAEGLKEGIVECGAMEKDLYLYSLLLMHPTQRTLVFTNSISSVRRLTPMLQQLTLPVIAL 507
Query: 517 HAQMQQRARLK 527
H+QM Q+ARL+
Sbjct: 508 HSQMIQKARLR 518
>gi|440469812|gb|ELQ38909.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae Y34]
Length = 760
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 205/371 (55%), Gaps = 37/371 (9%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
++E + + W L L +M SI +L+F +PT IQ A IP G DV+G A TGS
Sbjct: 177 IDETDEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEIL-AGHDVVGKASTGS 235
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAFG+PI+++ L A + E E P AL+++PTRELA Q+TDH+
Sbjct: 236 GKTLAFGIPIVEKWLSIN---ASTQSKRVAEGETKTPI----ALVLSPTRELAHQLTDHI 288
Query: 285 KGVAKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
K + G+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S K + +
Sbjct: 289 KNLCAGLATSPYVCSVTGGLSVHKQQRQLE-KADIVVGTPGRLWEVLSSSTKLIQAFRGI 347
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR--KKRQTL 400
F V+DEADR++ GHF++ + I + L + G + R K RQTL
Sbjct: 348 KFLVVDEADRLLSEGHFKDAKDIFEGLDKVETDDDG-------------IIRGGKARQTL 394
Query: 401 VFSATIALSADFRKKLKH---GSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCV 456
VFSAT F K L+ G + + + S+E L ++ R + +D+ +
Sbjct: 395 VFSAT------FNKGLQQKLAGKGRFDLATDS-QSMEYLLKKLKFREEIPKFIDVNPVSQ 447
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
+A L+E +EC +KD YLY +L +H RT+VF SI+++R ++ +L+ L + V L
Sbjct: 448 MAEGLKEGIVECGAMEKDLYLYSLLLMHPTQRTLVFTNSISSVRRLTPMLQQLTLPVIAL 507
Query: 517 HAQMQQRARLK 527
H+QM Q+ARL+
Sbjct: 508 HSQMIQKARLR 518
>gi|326675871|ref|XP_003200454.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Danio rerio]
Length = 881
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 202/415 (48%), Gaps = 75/415 (18%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
EA + +W +L + +++++ L F PT IQ +P A D++GAAETGSGK
Sbjct: 275 EAPGPADVSSWRDLLVPEPVLRALAVLGFSAPTAIQALVLPPAIRDRLDILGAAETGSGK 334
Query: 227 TLAFGLPIMQRLLEEREKA-------------------------------------AKML 249
TL FG+P++ +L+ RE+ +++
Sbjct: 335 TLCFGIPMIHMILQWREQTEEHSTPERTHTPAQSLYLQEEHGEDDDDDDDDDEKKDDEVI 394
Query: 250 ED-----KGEEAEKYAPKGH------------LRALIITPTRELALQVTDHLKGVAKGIN 292
+D +G A P G L L++TPTRELA+QV H+ VA+
Sbjct: 395 DDDEGGAEGCSAPPDDPDGQNDPDPASGVCRPLLGLVLTPTRELAVQVKHHIDAVAQFTG 454
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++ +VGGM+ +KQ R+L RPE+++ TPGRLWE++ HL +L L VLDEADR
Sbjct: 455 IKTAIVVGGMAPQKQHRVLMRRPEIIIATPGRLWEMIREKHPHLQDLRQLRCLVLDEADR 514
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E GHF + + N SS +RQT VFSAT+ L
Sbjct: 515 MVEKGHF---------------AELESLLELLNTSQFSS----RRQTFVFSATLTLVHSL 555
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+L+ K ++ + ++ L E+ G+R ++DLT L E+ I C +ED
Sbjct: 556 PSRLQQKK-KKQRPAEQRSKLQLLMEKVGVRDKPKVIDLTRKQATVETLTETRISCTKED 614
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
KD +LYY L + GR++VF SIA ++ + +LL +L LHA M Q+ RLK
Sbjct: 615 KDLFLYYFL-LQFPGRSMVFANSIACIKRLYALLHLLDCTPLMLHANMHQKQRLK 668
>gi|85086234|ref|XP_957656.1| hypothetical protein NCU04041 [Neurospora crassa OR74A]
gi|74662508|sp|Q7RZH4.1|MAK5_NEUCR RecName: Full=ATP-dependent RNA helicase mak-5
gi|28918750|gb|EAA28420.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|39979232|emb|CAE85602.1| related to ATP-dependent RNA helicase [Neurospora crassa]
Length = 805
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 199/369 (53%), Gaps = 36/369 (9%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P ++ SI +L+F +PT IQ IP G DVIG A TGSGKTLAFG+P+++
Sbjct: 211 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEI-MAGHDVIGKASTGSGKTLAFGIPVIE 269
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
L E + E++ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 270 SWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPTAPY 319
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 320 ICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLL 378
Query: 355 ENGHFRELQSIIDML--PMTNGSNKGQ-------------SEQTQNCVTVSSLQRKKRQT 399
++GHF+E + I L P +N+ Q E ++ KRQT
Sbjct: 379 KDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEHVNKRQT 438
Query: 400 LVFSATIALSADFRKKLKHG-SLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
L+FSAT F K L+ + KSK +E L ++ R VD + +A
Sbjct: 439 LIFSAT------FNKNLQQKLAGKSKFKATSTQDMEYLLQKLNFRETPKFVDANPVHQMA 492
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
L+E I C + +KD YLY L + R +VF S+ ++R ++ LL+ L + + LH+
Sbjct: 493 ENLKEGLIMCGDMEKDLYLYATLMLQPTRRALVFTNSVNSVRRLTPLLENLNLPAFPLHS 552
Query: 519 QMQQRARLK 527
M Q+ARL+
Sbjct: 553 GMIQQARLR 561
>gi|363734223|ref|XP_421338.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Gallus gallus]
Length = 809
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 204/423 (48%), Gaps = 79/423 (18%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
E L + + AW +L + ++K++ L F PTPIQ +P+A D++GAAE
Sbjct: 190 EVLSTSTDHKADVSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAE 249
Query: 222 TGSGKTLAFGLPIMQRLLE-------------------------------EREKA-AKML 249
TGSGKTLAF +P++ +LE E EK + +
Sbjct: 250 TGSGKTLAFAIPMIHSVLEWQKSNSSASVSDSVSKKPYQHHDEMRWENDDEAEKPNHQQV 309
Query: 250 EDKGEEAEKYAPKGHLRA-------------------------LIITPTRELALQVTDHL 284
ED G+E + G ++ L++TPTRELA+QV H+
Sbjct: 310 EDSGDEDDASFATGCVKVQENTEYDSSNKEHTVGLHKKRPLLGLVLTPTRELAVQVKHHI 369
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
VAK ++ +VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L
Sbjct: 370 DAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELIKERHPHLSNLRQLRC 429
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
V+DEADRM+E GHF EL ++++L N Q KRQT VFSA
Sbjct: 430 LVIDEADRMVERGHFLELSQLLEVL------NDSQYN-------------PKRQTFVFSA 470
Query: 405 TIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEES 464
T+ L ++ K +E L E+ G++ ++DLT L E+
Sbjct: 471 TLTLVHQTPARILQKKNAKKIDKK--TKLEMLMEKVGIKGKPKVIDLTRKEATVETLMET 528
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
I C +KD YLYY L GRT+VF SI ++ +SSLL IL D + LHA M Q+
Sbjct: 529 RIHCDTNEKDYYLYYFLLQ-YPGRTMVFANSIDCIKRLSSLLTILNCDPFPLHANMHQKQ 587
Query: 525 RLK 527
RLK
Sbjct: 588 RLK 590
>gi|324502072|gb|ADY40913.1| ATP-dependent RNA helicase DDX24 [Ascaris suum]
Length = 790
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/425 (34%), Positives = 218/425 (51%), Gaps = 51/425 (12%)
Query: 115 DGSGVQKQEEKNLKNETGKKKKKKKKGKKIK-TVEESVA------VSNGPDDAEEELVNE 167
D S V E + ++ K+KK+K+ + ++ ++ E + V G + +E
Sbjct: 161 DRSKVNGSESVSFADDGKPKQKKRKREQSLRESISEDIVENEEERVRGGCEPTSTSHTSE 220
Query: 168 AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKT 227
++S AW L +MK++ L F +PT IQK +P+A DV+GAAETGSGKT
Sbjct: 221 VDLS----AWMPFCLPDEIMKALADLGFTKPTEIQKLVLPSAVRDKLDVLGAAETGSGKT 276
Query: 228 LAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV 287
LA+ +P++ RLL D E + + HLRALI+ PTREL +Q+ H+ +
Sbjct: 277 LAYAIPLIVRLL-----------DAQNSMEDWTLQRHLRALILAPTRELVVQIRKHIDAL 325
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK--HLVELHTLSFF 345
K N + IVGG+S +KQERLLK RPE+VV TPGR W L + +L L
Sbjct: 326 IKYTNFKATSIVGGLSQQKQERLLKYRPEIVVATPGRFWSLAGNAPQGSYLANWQKLLCL 385
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
V+DE DRM+E GHF EL+ I++ + S KRQTLVFSAT
Sbjct: 386 VVDETDRMVEKGHFEELEFILE--------------------AIKSDGNVKRQTLVFSAT 425
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
+ ++L +++ Q + I+ L E G+R + D+T A L E+
Sbjct: 426 LTFVHPAPRRL---NIQQTQQMTTKEKIDRLIEIVGLRKERKVFDITRPLGTAEALLETR 482
Query: 466 IECKE-EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL-KILGIDV-WTLHAQMQQ 522
+ C +KD + Y+L+ + GRT++F SI A R + +L K+ V LHA+M Q
Sbjct: 483 MNCSNLAEKDTNVVYLLTRYP-GRTLIFMNSIDASRRLYGILVKLQHKPVPLLLHAKMIQ 541
Query: 523 RARLK 527
+ RLK
Sbjct: 542 KQRLK 546
>gi|380478434|emb|CCF43606.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 779
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 211/368 (57%), Gaps = 28/368 (7%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
V EAE + W +L L P + +I +L+F +PT IQ + IP G DVIG A TGS
Sbjct: 204 VEEAEEDLDMTPWVDLGLSPATVSAIAKLKFAKPTKIQASTIPEIL-AGHDVIGKASTGS 262
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAF +PI++ L++ E+ A G + EK A L ALI++PTRELA Q+T+H+
Sbjct: 263 GKTLAFSIPIVEDWLDKYEEKAD-----GGKPEK-ADNTPL-ALILSPTRELAHQITNHI 315
Query: 285 KGVAKG-INVR-VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
K + G +N V + GG+S KQ+R L A+ ++V+GTPGRLWE++SG + L +
Sbjct: 316 KNLCAGLVNAPFVCSVTGGLSVFKQQRQL-AKADIVIGTPGRLWEVISGSRELLAGFRQI 374
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVF 402
+ V+DEADR++ GHF+E I+D L ++ E+ + SL RQTLVF
Sbjct: 375 RYLVVDEADRLLSEGHFKEAGEILDAL------DREVIEEDDDDDDEKSLS--ARQTLVF 426
Query: 403 SATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLAN 459
SAT L K K G + ++ S+E L ++ R +D+ +A+
Sbjct: 427 SATFHQGLQQKLAGKGKWGLMSEEE------SMEYLLKKLNFREEKPKFIDVNPAKQMAS 480
Query: 460 KLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
L+E IEC +KD YLY ++ ++ RT+VF SI+A+R ++ L+ L I+ LH+Q
Sbjct: 481 GLKEGLIECGGMEKDLYLYTVILLNPNRRTLVFTNSISAVRRLAPFLQNLNINATALHSQ 540
Query: 520 MQQRARLK 527
M Q+ARL+
Sbjct: 541 MAQKARLR 548
>gi|443896134|dbj|GAC73478.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 886
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 209/408 (51%), Gaps = 60/408 (14%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA-------------------AHQ 212
+ AW+ L LH L +++ F PT IQ IP A A +
Sbjct: 224 SSLPAWSHLPLHAALKRALAHKGFHSPTEIQNRSIPLALGLQQDDSSDSDEPSTSSSAFK 283
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
+DV+G ++TGSGKTLA+GLPI+ L E A + P G ALI+ P
Sbjct: 284 KRDVVGVSQTGSGKTLAYGLPILNYLFHNAENVASA----PTHGDVPPPLG---ALILCP 336
Query: 273 TRELALQVTDHLKGVAKGINV--------------RVVPIVGGMSTEKQERLLKARP--- 315
TRELALQV+ HL V + + ++ + GGMS KQ RLL+ R
Sbjct: 337 TRELALQVSAHLTDVIRSSCLVDDTLSYAKLVRRPQIAVVCGGMSEHKQRRLLQGRSRRA 396
Query: 316 --EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
+++V TPGRLWE+ ++ + + F VLDEADRM++ GHF E++ I++++
Sbjct: 397 GVDIIVATPGRLWEMTRLDDELAARIKQVRFLVLDEADRMVQVGHFAEMEHILNLVHRAE 456
Query: 374 GSN--KGQSEQTQN------CVTVSSLQRKK--RQTLVFSATI--ALSADF--RKKLKHG 419
+GQ Q + V V R QT VFSAT+ AL + R+KL
Sbjct: 457 AQRPKEGQDGQQSDSDGESGAVVVGEGVRPNAAMQTFVFSATLSKALQTNLKRRRKLPQF 516
Query: 420 SLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYY 479
+ K + +++E L ER R++ AIVDLT L + L E+ +EC +DKDAYLYY
Sbjct: 517 TKKRHSKRSAGSTLEELLERIDFRSSPAIVDLTPAQGLPSGLMETKLECVSKDKDAYLYY 576
Query: 480 ILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L + GR++VF SI +R +S +L LG+ + +H+Q+QQ+ RLK
Sbjct: 577 FL-LRYPGRSLVFVNSIDGIRRLSPILAQLGLVCYPIHSQLQQKQRLK 623
>gi|339238663|ref|XP_003380886.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
gi|316976157|gb|EFV59493.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
Length = 654
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 208/384 (54%), Gaps = 41/384 (10%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEIS-TEFDAWNELRLHPLL 186
KN + K+K K K+ + I +E+ + + E V+E + + W EL + +
Sbjct: 48 KNTSKKRKLKNKQSRAIIDKQEASGKKSKLESFES--VDENYVPGKKLKKWQELFVPEEI 105
Query: 187 MKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
+ ++ L++ EPTPIQ C+P A D++GAAETGSGKTLAFG+P++ LL E +
Sbjct: 106 LHALDDLEYFEPTPIQALCLPPAIRDRLDILGAAETGSGKTLAFGIPVIAGLLSENSDS- 164
Query: 247 KMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEK 306
+ H ALI+TPTRELA+Q+ DHL + K N+++ GG+S +K
Sbjct: 165 ---------------QIHPSALILTPTRELAIQIKDHLSSIMKYTNLKLTTATGGLSVQK 209
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
Q+RLLK P++V+ TPGRLW L+S + L LH + + V+DE DRM E +F E ++
Sbjct: 210 QQRLLKDDPDIVIATPGRLWALISEDCEGLENLHKIKYLVIDEIDRMAEKQNFAEFSQLL 269
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS 426
+ L NG +N + +KRQTLVFSAT++ +L S + +
Sbjct: 270 EFL---NGD--------ENAI-------RKRQTLVFSATLSFVHPMPNRL--LSKANAKP 309
Query: 427 VNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE-EDKDAYLYYILSVHG 485
++ IE L MR ++DL++ L++ L ES + C E KD LYY L H
Sbjct: 310 LSPEEKIENLISFLSMRPKRKVIDLSSKHGLSSSLVESCLFCSTLEMKDTSLYYFLR-HY 368
Query: 486 QGRTIVFCTSIAALRHISSLLKIL 509
GRT++F S+ +R + +LL +L
Sbjct: 369 PGRTLIFANSVNCVRRLKNLLSLL 392
>gi|448091200|ref|XP_004197272.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|448095690|ref|XP_004198303.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|359378694|emb|CCE84953.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
gi|359379725|emb|CCE83922.1| Piso0_004519 [Millerozyma farinosa CBS 7064]
Length = 751
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 266/519 (51%), Gaps = 49/519 (9%)
Query: 21 RKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPK 80
+K+ +KG + K D+LKW ++ D + G ELDG +++ + N++
Sbjct: 34 KKKLQKGSKIVKADNLKWKEVEIPDNLDDYEGFYGLEELDGV-----DVEYENGNIKFI- 87
Query: 81 PEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGS--GVQKQEEKNLKNETGKKKKKK 138
K G K+ K++K + + DED S G +E ++
Sbjct: 88 ---VKDGDKVEEKEKKTGDEVTKTEVSATDNDDEDASDFGGFSDDEMDVDGSDSTDVAPI 144
Query: 139 KKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEP 198
K+ K + E+S +N + L + I + W L L ++ + +L+F +P
Sbjct: 145 KEAKAKEVSEDSELTANTFTNLSVTLPDPNSI--DLPHWKPLSLSAYTLQGLQQLKFSKP 202
Query: 199 TPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEK 258
TPIQK IP A +G+D +G A TGSGKTLA+G+PI++R L ++A + + ++
Sbjct: 203 TPIQKKAIPYAL-EGRDTVGKAVTGSGKTLAYGIPILERYLTRLQQA----QTHSKTSKI 257
Query: 259 YAPKGHLRALIITPTRELALQVTDHLKGVAKGINV---RVVPIVGGMSTEKQERLLKARP 315
+P G +I PTRELA QV DHLK +AK +V + GG+S +KQERLL+ P
Sbjct: 258 SSPAG----IIFAPTRELAHQVVDHLKELAKYFPFPPNAIVSMTGGLSIQKQERLLEKGP 313
Query: 316 EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
+VV TPGR E++ EK++ +L VLDEADR++++GHF E + +++L + +
Sbjct: 314 GIVVTTPGRFLEILQSDEKYVTQLSGCDIVVLDEADRLLQDGHFEEFEKALELLSKSRKN 373
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK------SKQSVNG 429
+K +S + QTLV+SAT S D KL + SK V+
Sbjct: 374 SKAKSW--------------RWQTLVYSAT--FSKDLFSKLDKNPRRKETFDSSKSLVDN 417
Query: 430 LNSIETLSERAGMRANV-AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
I L+ + R + A+VD ++A ++ E+ +EC ++D YLYY L ++ G
Sbjct: 418 TEIITLLNSKLKFRDSAPALVDANPKEIVAGQITEALVECGSTERDLYLYYFLLLYS-GT 476
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T+VF SI +++ +S LK L I ++LH+ M Q+ RL+
Sbjct: 477 TLVFANSIDSVKRLSHFLKNLNIPTFSLHSSMIQKQRLR 515
>gi|407919561|gb|EKG12791.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 735
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 197/361 (54%), Gaps = 28/361 (7%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AWN L L M +I +L+F PT IQ+A IP G DV+G A TGSGKTLAFG+PI+
Sbjct: 198 AWNSLNLSNETMVAISKLKFGAPTRIQRAAIPEIL-SGHDVVGKAATGSGKTLAFGIPIL 256
Query: 236 QRLLEER--EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+ LE + +KA K KGE+A ALI++PTRELA Q++ HL +
Sbjct: 257 ESFLESQGNKKAPK----KGEKAPT--------ALILSPTRELAHQISKHLTDLYTSGTF 304
Query: 294 R---VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
V I GG+S +KQ+R L+ +VVVGTPGRLWE++S G L F V+DEA
Sbjct: 305 ESPFVATITGGLSIQKQQRQLET-ADVVVGTPGRLWEVISLGHGVLKRFKRTKFLVVDEA 363
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI--AL 408
DR++ GHF+E++ I+++L + + E+ +RQTLVFSAT L
Sbjct: 364 DRLLSEGHFKEVEEILNVLGSEDEDEDAEDEEENEEREDVQDSPVQRQTLVFSATFNKGL 423
Query: 409 SADFRKKLK-HGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFI 466
K K HG L S + S+E L ++ R VD+ + +A L+E +
Sbjct: 424 QQKLTGKAKWHGDLLSNK-----ESMEYLLKKLNFREERPKFVDVNPVSQMAEGLKEGLV 478
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
EC +KD YLY +L H + RT++F S++A+R + L L + LH+ M Q+ RL
Sbjct: 479 ECGATEKDLYLYALLMFHPKTRTLIFTNSVSAVRRLHPFLTNLNLPALALHSHMAQKQRL 538
Query: 527 K 527
+
Sbjct: 539 R 539
>gi|398403739|ref|XP_003853336.1| hypothetical protein MYCGRDRAFT_41129 [Zymoseptoria tritici IPO323]
gi|339473218|gb|EGP88312.1| hypothetical protein MYCGRDRAFT_41129 [Zymoseptoria tritici IPO323]
Length = 793
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 210/379 (55%), Gaps = 37/379 (9%)
Query: 162 EELVNEAEIST-EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
E L +A S + AW L+L P M ++ L+F +PT IQK IP G DVIG A
Sbjct: 197 ESLAEDANDSAADVSAWRPLKLCPDTMAALAALKFSKPTAIQKFVIPEVL-AGHDVIGKA 255
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKTLAFG+PI++R LE A G+ A K AP ALI++PTRELA+Q+
Sbjct: 256 STGSGKTLAFGIPILERFLESAVGA------DGKRA-KRAP----LALILSPTRELAVQL 304
Query: 281 TDHLKGV-AKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
HL + + G++ R + + GGMS +KQ+R LK ++VV TPGRLWE++ G
Sbjct: 305 DQHLTSLCSSGLSRRPWIATLTGGMSIQKQQRQLK-DADIVVATPGRLWEIIESGRGTAA 363
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
L + F V+DEADR++ G F+E++ I++ L + + +G E + R
Sbjct: 364 MLKQIEFLVIDEADRLLSEGQFKEVEEILNSLDRVDDA-EGAEEGDET-----------R 411
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGL-NSIETLSERAGMRAN-VAIVDLTNMC 455
QTLVFSAT + +KKL G + + ++ G S+E L + R +D +
Sbjct: 412 QTLVFSATFDRA--LQKKLV-GKVNRQSALMGSKESMEYLLGKLNFREEEPKFIDANPVN 468
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
LA+ L E IEC +KD YLY +L R +VF SI+A+R I+ LL+ L I+
Sbjct: 469 QLASGLREGLIECSGTEKDLYLYALLLHETPTRAMVFTNSISAVRRITPLLQYLNINAMA 528
Query: 516 LHAQMQQRARLK---LFSQ 531
LH+ M Q+ARL+ FSQ
Sbjct: 529 LHSGMPQKARLRSIERFSQ 547
>gi|336466285|gb|EGO54450.1| hypothetical protein NEUTE1DRAFT_87798 [Neurospora tetrasperma FGSC
2508]
Length = 808
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 199/375 (53%), Gaps = 42/375 (11%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P ++ SI +L+F +PT IQ IP G DVIG A TGSGKTLAFG+P+++
Sbjct: 208 WVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEI-MAGHDVIGKASTGSGKTLAFGIPVIE 266
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
L E + E++ KG ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 267 SWLSAAETRKQNKEER---------KGAT-ALILSPTRELAQQIRDHLQALCKGLPTAPY 316
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ ++GGM+ +KQ+R L+ ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 317 ICSVLGGMAVQKQKRQLQV-ADIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLL 375
Query: 355 ENGHFRELQSIIDML--PMTNGSNKGQ-------------------SEQTQNCVTVSSLQ 393
++GHF+E + I L P +N+ Q E+ +
Sbjct: 376 KDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEEEEEEEH 435
Query: 394 RKKRQTLVFSATIALSADFRKKLKHG-SLKSKQSVNGLNSIETLSERAGMRANVAIVDLT 452
KRQTL+FSAT F K L+ + KSK +E L ++ R VD
Sbjct: 436 VNKRQTLIFSAT------FNKNLQQKLAGKSKFKATSTQDMEYLLQKLNFRETPKFVDAN 489
Query: 453 NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
+ +A L+E I C + +KD YLY L + R +VF S+ ++R ++ LL+ L +
Sbjct: 490 PVHQMAENLKEGLIMCGDMEKDLYLYATLMLQPTRRALVFTNSVNSVRRLTPLLENLNLP 549
Query: 513 VWTLHAQMQQRARLK 527
+ LH+ M Q+ARL+
Sbjct: 550 AFPLHSGMIQQARLR 564
>gi|302890093|ref|XP_003043931.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
gi|256724850|gb|EEU38218.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
Length = 760
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 197/354 (55%), Gaps = 24/354 (6%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW L L P ++ +I +L F +PT IQ+ IP G+DVIG A+TGSGKTLAFG+P++
Sbjct: 195 AWVPLNLSPQILSAIAKLGFTKPTLIQEKTIPEIV-SGEDVIGKAQTGSGKTLAFGIPMV 253
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--V 293
++ LE E+ E+ P +++++PTRELA Q+ DHLK + G++
Sbjct: 254 EKWLELYEQGV----------ERTGP----MSVVLSPTRELAKQLGDHLKALCDGLSNAP 299
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
V + GG+S +KQ+R L+ + ++V+GTPGRLWE++SG + F V+DEADR+
Sbjct: 300 YVCVVTGGLSIQKQQRQLE-KADIVIGTPGRLWEVLSGDATLQNTFSKIRFLVVDEADRL 358
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ G F+E + II L + + +R RQTLVFSAT D +
Sbjct: 359 FKVGQFKEAEDIIGALDGKR-PSDDADSSDEEDDEEEDDERSARQTLVFSAT--FDKDLQ 415
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KL K K + N + L + R +D+ + +A+ L+E IEC +K
Sbjct: 416 TKLAG---KGKSTGNDEEKMAYLMKCLKFRGEPKFIDVNPVSQMADGLKEGLIECGAMEK 472
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
D YLY +L ++ RT+VF SI+A+R ++ LL L + LH+QM Q+ARL+
Sbjct: 473 DLYLYTVLILNPGRRTLVFTNSISAVRRLTPLLSNLNMTALPLHSQMAQKARLR 526
>gi|115400477|ref|XP_001215827.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191493|gb|EAU33193.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 791
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 213/383 (55%), Gaps = 37/383 (9%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
E + + AW L L P ++ S+ +L+F PT +QK+CIP G DV+G A TGSGK
Sbjct: 194 EEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPIL-DGHDVVGKASTGSGK 252
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
TLAFG+PI++ LE++ + K +DK E + ALI++PTRELA Q+ H+
Sbjct: 253 TLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLVKHIGE 304
Query: 287 V---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
V A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++SGG+ + ++ +
Sbjct: 305 VITHAPGVNARIALLTGGLSVQKQQRLLNG-ADIVIGTPGRVWEVLSGGQGLISKMKEIK 363
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
+ V+DEADR++ GHF+E I+ L ++ +E+ ++ S Q RQTLVFS
Sbjct: 364 YLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQ---RQTLVFS 420
Query: 404 ATIALSADFRKKLK-HGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKL 461
AT D ++KL G +N S+E L ++ R +D+ + +A L
Sbjct: 421 AT--FHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQMAEGL 478
Query: 462 EESFIECKEEDK-----------------DAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
+E +EC +K D YLY +L H + RT+VF SI+A+R ++
Sbjct: 479 KEGIVECAAMEKVQSADTLSMDFTLTLFQDLYLYTLLLYHPKHRTLVFTNSISAVRRLTQ 538
Query: 505 LLKILGIDVWTLHAQMQQRARLK 527
L+ L + LH+ M Q+ARL+
Sbjct: 539 FLQALQLPALALHSSMAQKARLR 561
>gi|254574120|ref|XP_002494169.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Komagataella pastoris GS115]
gi|238033968|emb|CAY71990.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Komagataella pastoris GS115]
gi|328354012|emb|CCA40409.1| similar to ATP-dependent RNA helicase [Komagataella pastoris CBS
7435]
Length = 758
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 259/552 (46%), Gaps = 84/552 (15%)
Query: 12 HSKKTKPNRRKRT---------RKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGG 62
HSKK + + K + R G+ SLKW E D F L G E+DG
Sbjct: 13 HSKKQRKDNFKSSVVKPKAVIKRPTGKLVSASSLKWKPVEIPETLDDFQGLFGVEEIDGV 72
Query: 63 FLSLE------EIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDG 116
+ ++ E+ E N E K +++ A D + D + E+
Sbjct: 73 GVVIKNGEIKFEVKEDHEN------ETVKDTDQMSDDDEVFQDAESLDGREDDQNEPENF 126
Query: 117 SGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDA 176
EK ++ G K KK K K +K V++ + D E++ E + +F
Sbjct: 127 ELDSVSTEKVPESTPGVKSNKKVKRKDVKEVKKDEDQEDLEDAGSEQVPMEEDGHFKFSQ 186
Query: 177 -----------WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
W E L P + +S+ L F EPTPIQ IP A GKD+IG A TGSG
Sbjct: 187 MKMPEDVDLPLWPE-GLSPFVRQSLSILGFNEPTPIQNEAIPLAI-SGKDIIGKAITGSG 244
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KTLA+G+P++++ L ++ K AP ++ PTRELA QV HLK
Sbjct: 245 KTLAYGIPLIEKYLTRESRS------------KQAPPA---GIVFAPTRELAHQVVKHLK 289
Query: 286 GVAKGINVR---VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
+AK + V+ + GG+S ++Q+RLL P ++V TPGR EL+ + L ++
Sbjct: 290 EIAKDSPLTEHGVISVTGGLSIQRQQRLLDYGPGIIVATPGRFLELLESSNELATRLASV 349
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVF 402
VLDEADR++++GHF EL+ I+ L N +QR QTLVF
Sbjct: 350 EVLVLDEADRLLQDGHFDELEKILSSLKKMRPHN---------------IQR--WQTLVF 392
Query: 403 SATIALSADFRKKLKHGSLKSKQSVN---GLNS----IETLSERAGMRANVAIVDLTNMC 455
SAT F K+L G L SK N GL IE L +R R +VD
Sbjct: 393 SAT------FSKEL-FGKLGSKYRWNEDQGLAEDEQIIELLGKRLRFRQKPTLVDTNPTE 445
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
V+ N++ E+ IEC ++D +LYY + ++ G T+VF SI A+R + L+ LGI +
Sbjct: 446 VVTNQVREALIECGATERDLHLYYFMMMY-PGTTLVFANSIDAVRRLVPFLQNLGIPAFG 504
Query: 516 LHAQMQQRARLK 527
LH+ M Q+ RL+
Sbjct: 505 LHSSMIQKQRLR 516
>gi|425778251|gb|EKV16391.1| ATP dependent RNA helicase, putative [Penicillium digitatum Pd1]
gi|425780471|gb|EKV18477.1| ATP dependent RNA helicase, putative [Penicillium digitatum PHI26]
Length = 771
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 205/357 (57%), Gaps = 21/357 (5%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW+ L L P ++ +++F P+ IQKA IPA G DV+G A TGSGKTLAFG+PI+
Sbjct: 193 AWDGLNLSPETFTALSKMKFSSPSAIQKASIPAIL-DGHDVVGKASTGSGKTLAFGIPII 251
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---AKGIN 292
+ L++R K+ E + +P ALI++PTRELA Q+ H+ + + N
Sbjct: 252 EHYLDKR---GKLREQSDTSEQNKSPI----ALILSPTRELAHQLGKHIGDLIANSPDTN 304
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
R+ + GGMS +KQ+R L A ++VVGTPGR+WE++S G + ++ + F V+DEADR
Sbjct: 305 ARIALVTGGMSIQKQQRQL-ATADIVVGTPGRVWEILSTGTGLIRKMQKIQFLVVDEADR 363
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ GHF+E++ I+D L + +Q + S RQTLVFSAT D
Sbjct: 364 LLSEGHFKEVEDILDALDKHQAGDIADVDQEEEEEQPS-----HRQTLVFSAT--FHKDL 416
Query: 413 RKKLKHGS-LKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKE 470
++KL S S ++ S+E L ++ R +D+ +A L+E +EC
Sbjct: 417 QQKLAGKSRWASGDMLDNKASMEYLLKKLNFREEKPKFIDVNPESQMAIGLKEGIVECPA 476
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + + R IVF SI+A+R I+ LL+ L + V+ LH+ M Q+ARL+
Sbjct: 477 MEKDLYLYSVLLYYPKNRIIVFTNSISAVRRITQLLQALQLPVFALHSNMAQKARLR 533
>gi|320039765|gb|EFW21699.1| ATP-dependent RNA helicase MAK5 [Coccidioides posadasii str.
Silveira]
Length = 783
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 278/561 (49%), Gaps = 76/561 (13%)
Query: 20 RRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGK-----------PGKKLNSKKRKRSSANEEDSGDGDGDGDED 115
EEI+ + I +P G G NS + A + + G GD E
Sbjct: 64 EEIE----GVDILRPSGGGEIKFRASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSEG 119
Query: 116 GSGVQKQEEKNLKNE------------TGKKKKK----KKKGKKIKT---VEESVAVSNG 156
G + EK +N + K+K+ K +G +IKT ++ V+ +
Sbjct: 120 GDRTTFEAEKKAENHGKVNDRRTKTNHSNKEKESNTLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
D+ EE++ + AW+ L L L S+ RL+F PTPIQ ACIPA QG DV
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSFPTPIQSACIPAVL-QGHDV 230
Query: 217 IGAAETGSGKTLAFGLPIMQRLL-EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRE 275
IG A TGSGKTLAFG+PI++ L + R A ++ E ++ ALI++PTRE
Sbjct: 231 IGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEESESTKEPM------ALILSPTRE 284
Query: 276 LALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGG 332
LA Q+ HL + A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 285 LAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSM 343
Query: 333 EKHLVELHTLSFFVLDEADRMIENGHFRELQSI---IDMLPMTNGSNKGQSEQTQNCVTV 389
L +L + F V+DEADR++ GHF+E++ I ID + +T + +SE+
Sbjct: 344 TGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPD 403
Query: 390 SSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
+ + RQTLVFSAT L K+++ ++ ++ S+E L + R
Sbjct: 404 EEKKAEPRQTLVFSATFHKGLQQKLSGKIRY---RNDDLLDKKESMEYLLRKLNFREERP 460
Query: 448 -IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
+D+ + +A L+E ++C DKD LY +L H + RT+VF SI+A+R ++ LL
Sbjct: 461 KFIDVNPISQMAENLKEGLVQCAPMDKDLLLYTLLLYHPKHRTLVFTNSISAVRRLTQLL 520
Query: 507 KILGIDVWTLHAQMQQRARLK 527
+ L + + LH+ M Q+ARL+
Sbjct: 521 QNLNLPTFALHSSMAQKARLR 541
>gi|121699618|ref|XP_001268081.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|143345189|sp|A1CTL8.1|MAK5_ASPCL RecName: Full=ATP-dependent RNA helicase mak5
gi|119396223|gb|EAW06655.1| ATP dependent RNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 774
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 207/366 (56%), Gaps = 16/366 (4%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
E + + AW+ L L L+ I +++F PT +Q ACIP G DV+G A TGSGK
Sbjct: 190 EEDDGVDVSAWDALNLSTELLTGISKMKFTSPTAVQAACIPHIL-DGHDVVGKASTGSGK 248
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
TLAFG+PI++ LE+ + K ++ + ALI++PTRELA Q+ H+
Sbjct: 249 TLAFGIPILEHYLEKNRDGHGDIIGKKDKKDSTPI-----ALILSPTRELAHQLAKHIGE 303
Query: 287 V---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
+ A G+N R+ + GG+S +KQ+RLL A ++V+GTPGR+WE+MS G+ + ++ +
Sbjct: 304 LVTQAPGVNARIALLTGGLSVQKQQRLL-AGADIVIGTPGRVWEIMSTGQGLIRKMQKIK 362
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
F V+DEADR++ GHF+E++ II L + ++ S R +RQTLVFS
Sbjct: 363 FLVVDEADRLLSEGHFKEVEEIIGALDRVEDGD--VLDEEDEAPEEESDPRSERQTLVFS 420
Query: 404 ATIALSADFRKKLK-HGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKL 461
AT D ++KL G +N S++ L ++ R +D + +A L
Sbjct: 421 AT--FHRDLQQKLAGKGKWTGGDIMNKKESMDYLLQKLNFREEKPKFIDTNPVSQMAENL 478
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+E +EC +KD +LY +L H + RT+VF SI+A+R ++ LL+ L + LH+ M
Sbjct: 479 KEGIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLAQLLQALQLPALALHSSMA 538
Query: 522 QRARLK 527
Q+ARL+
Sbjct: 539 QKARLR 544
>gi|303311697|ref|XP_003065860.1| ATP-dependent RNA helicase MAK5, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240105522|gb|EER23715.1| ATP-dependent RNA helicase MAK5, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 783
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 278/561 (49%), Gaps = 76/561 (13%)
Query: 20 RRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDG-------------GFLSL 66
+R K A+ + K+N + + +D +V ++LD GF L
Sbjct: 4 KRSHNHKDHTAKAIKRRKFNAATAKSSDDAAHDIVSVDQLDWKTVTLPDRLDDAEGFYGL 63
Query: 67 EEIDEASYNLQIPKPEKGK-----------PGKKLNSKKRKRSSANEEDSGDGDGDGDED 115
EEI+ + I +P G G NS + A + + G GD E
Sbjct: 64 EEIE----GVDILRPSGGGEIKFRASKSKIKGILKNSTDKSGQPAEDWEEWSGFGDDSEG 119
Query: 116 GSGVQKQEEKNLKNE------------TGKKKKK----KKKGKKIKT---VEESVAVSNG 156
G + EK +N + K+K+ K +G +IKT ++ V+ +
Sbjct: 120 GDRTTFEAEKKAENHGKVNDRRTKTNHSNKEKESNTLPKDRGPRIKTDNGIKTGVSFAAL 179
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
D+ EE++ + AW+ L L L S+ RL+F PTPIQ ACIPA QG DV
Sbjct: 180 QDEVEEDV--------DVSAWDSLDLSAELQTSLGRLKFSFPTPIQSACIPAVL-QGHDV 230
Query: 217 IGAAETGSGKTLAFGLPIMQRLL-EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRE 275
IG A TGSGKTLAFG+PI++ L + R A ++ E ++ ALI++PTRE
Sbjct: 231 IGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEESESTKEPM------ALILSPTRE 284
Query: 276 LALQVTDHLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGG 332
LA Q+ HL + A VR+ + GG+S KQ+RLL A ++++ TPGRLWE++
Sbjct: 285 LAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLL-ADADIIIATPGRLWEVVGSM 343
Query: 333 EKHLVELHTLSFFVLDEADRMIENGHFRELQSI---IDMLPMTNGSNKGQSEQTQNCVTV 389
L +L + F V+DEADR++ GHF+E++ I ID + +T + +SE+
Sbjct: 344 TGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPD 403
Query: 390 SSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
+ + RQTLVFSAT L K+++ ++ ++ S+E L + R
Sbjct: 404 EEKKAEPRQTLVFSATFHKGLQQKLSGKIRY---RNDDLLDKKESMEYLLRKLNFREERP 460
Query: 448 -IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
+D+ + +A L+E ++C DKD LY +L H + RT++F SI+A+R ++ LL
Sbjct: 461 KFIDVNPISQMAENLKEGLVQCAPMDKDLLLYTLLLYHPKHRTLIFTNSISAVRRLTQLL 520
Query: 507 KILGIDVWTLHAQMQQRARLK 527
+ L + + LH+ M Q+ARL+
Sbjct: 521 QNLNLPTFALHSSMAQKARLR 541
>gi|326920998|ref|XP_003206751.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Meleagris
gallopavo]
Length = 804
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 199/423 (47%), Gaps = 79/423 (18%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
E L + + AW +L + ++K++ L F PTPIQ +P+A D++GAAE
Sbjct: 185 EVLSTSTDHKADVSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAE 244
Query: 222 TGSGKTLAFGLPIMQRLL--------------------------------EEREKAAKML 249
TGSGKTLAF +P++ +L E E + +
Sbjct: 245 TGSGKTLAFAIPMIHCVLEWQKSNSSVSISDSVSKKPYQHPDEMRWESDGETEEPNHQEV 304
Query: 250 EDKGEE-AEKYAP------------------------KGHLRALIITPTRELALQVTDHL 284
ED G+E +A K L L++TPTRELA+QV H+
Sbjct: 305 EDSGDEDVASFATGCVKVQENAEFDSSDKEHTVGLHKKRPLLGLVLTPTRELAVQVKHHI 364
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
VAK ++ +VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L
Sbjct: 365 DAVAKFTGIKTAILVGGMAAQKQERVLNRKPEIVIATPGRLWELIKEKHPHLSNLRQLRC 424
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
V+DEADRM+E GHF EL ++++L N Q KRQT VFSA
Sbjct: 425 LVIDEADRMVERGHFLELSQLLEVL------NDSQ-------------YNPKRQTFVFSA 465
Query: 405 TIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEES 464
T+ L ++ K +E L E+ G++ ++DLT L E+
Sbjct: 466 TLTLVHQIPTRILQKKNAKKIDKK--TKLEMLMEKVGIKGKPKVIDLTRKEATVETLMET 523
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
I C +KD Y Y + GRT+VF SI ++ +SSLL IL D LHA M Q+
Sbjct: 524 RIHCDTNEKDYY-LYYFLLQYPGRTMVFANSIDCIKRLSSLLTILNCDPLPLHANMHQKQ 582
Query: 525 RLK 527
RLK
Sbjct: 583 RLK 585
>gi|367029791|ref|XP_003664179.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
gi|347011449|gb|AEO58934.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
Length = 785
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 197/357 (55%), Gaps = 30/357 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P ++ +I RL+F +PT IQ IP + G D+IG A TGSGKTLAFG+PI++
Sbjct: 203 WVPLGLSPQVLSAIARLKFAKPTAIQAKAIPHIMN-GHDLIGKAATGSGKTLAFGIPIVE 261
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
L R +A + +K P ALI++PTRELA Q+ DHLK + G+
Sbjct: 262 SWLARRAEA--------QTTDKKQPI----ALILSPTRELAHQIRDHLKELCAGLTTGPY 309
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V + GG++ +KQ+R + + +++VGTPGR+WEL S L L +SF V+DEADR++
Sbjct: 310 VCSVTGGLAVQKQQRQFE-KADILVGTPGRMWELASSSNSVLGALRGISFLVVDEADRLL 368
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
++GHF+E + I++ L + G+ + R RQTLVFSAT F K
Sbjct: 369 KDGHFKEAEEIMNAL---DRKAPGEEVVEDEGDSDDETPRHNRQTLVFSAT------FNK 419
Query: 415 KLKHGSLKSKQSVNGLN---SIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKE 470
L+ L K N + S+E L ++ R VD + +A L E I+C +
Sbjct: 420 NLQQ-KLAGKARYNLMGDAESLEYLLKKLNFREPRPKFVDTNPVSQMAENLREGLIQCGD 478
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD +LY +L + R +VF SI +R ++ L+ L + + LH+ M+Q+ARL+
Sbjct: 479 LEKDLFLYAVLLLQPTRRALVFTNSINTVRRLTPFLQALNLPAFALHSDMEQKARLR 535
>gi|224051667|ref|XP_002200206.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Taeniopygia guttata]
Length = 796
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 199/412 (48%), Gaps = 79/412 (19%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ +P+A DV+GAAETGSGKTLAF +
Sbjct: 192 DVSAWKDLFVPEPVLQALSYLGFSAPTPIQALALPSAIRDNMDVLGAAETGSGKTLAFAI 251
Query: 233 PIMQRLL----------------------------EEREKAAKML----EDKGEEAEKYA 260
P++ +L E+ ++A K+ ED G+E +
Sbjct: 252 PMIHSVLQWQKSSNSTTRNDSVSKESHQHHDEPRWEDEDEAEKLTHQQAEDSGDEDDASF 311
Query: 261 PKGHLRAL-------------------------IITPTRELALQVTDHLKGVAKGINVRV 295
G ++ L ++TPTRELA+QV H+ VAK ++
Sbjct: 312 TTGCVKVLENVEFDCDDETHTGDSNKKRPLLGLVLTPTRELAVQVKHHIDAVAKFTGIKT 371
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+VGGM+ +KQER+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E
Sbjct: 372 AILVGGMAAQKQERVLNRKPEIVIATPGRLWELVKERHPHLSNLRQLRCLVIDEADRMVE 431
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF EL ++++L N Q +RQT VFSAT+ L +
Sbjct: 432 KGHFLELSQLLEIL------NDSQ-------------YNPQRQTFVFSATLTLVHQTPTR 472
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ K +E L E+ G++ ++DLT L E+ I C +KD
Sbjct: 473 VLQKKNAKKMDKK--TKLELLMEKVGIKGKPKVIDLTRKEATVETLTETRIHCNTNEKDY 530
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
Y Y + GRT+VF SI ++ +SSLL IL D LHA M Q+ RLK
Sbjct: 531 Y-LYYFLLQYPGRTMVFANSIDCVKRLSSLLTILNCDPLPLHANMHQKQRLK 581
>gi|358369372|dbj|GAA85987.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 766
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW L L P ++ + +++F PT +QK+CIP G DVIG A TGSGKTLAFG+PI+
Sbjct: 193 AWESLGLSPEILTGLSKMKFTTPTLVQKSCIPQIL-DGHDVIGKASTGSGKTLAFGIPIL 251
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA---KGIN 292
+ LE++ + + K E+ + AP ALI++PTRELA Q+ H+ +A G +
Sbjct: 252 EHYLEKKRE--DLRAGKEEKKKDSAPI----ALIMSPTRELAHQLAKHIGELALHAPGSS 305
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
R+ + GG+S +KQ+R+L A ++V+GTPGR+WE++S G+ + ++ + F V+DEADR
Sbjct: 306 ARIALLTGGLSVQKQQRVL-AGADIVIGTPGRVWEVLSSGQGLIRKMSDIKFLVIDEADR 364
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ GHF+E + I+ L + G + + R +RQTLVFSAT D
Sbjct: 365 LLSEGHFKEAEEILGALDRVEDGDFGGDDSEDEEKEDA---RAQRQTLVFSAT--FHRDL 419
Query: 413 RKKLKHGSLKSKQSV-NGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKE 470
++KL + + + + S+E L ++ R +D+ + +A L+E +EC
Sbjct: 420 QQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEGIVECGA 479
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + + RT+VF SI+A+R ++ LL+ LG+ LH+ M Q+ARL+
Sbjct: 480 MEKDLYLYTLLLYNPKHRTLVFTNSISAVRRLTQLLQNLGLPALALHSSMAQKARLR 536
>gi|255932267|ref|XP_002557690.1| Pc12g08600 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582309|emb|CAP80487.1| Pc12g08600 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 719
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 211/358 (58%), Gaps = 23/358 (6%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW+ L L P ++ +++F P+ IQKA IPA G DV+G A TGSGKTLAFG+PI+
Sbjct: 141 AWDGLNLSPETFTALSKMKFSSPSAIQKASIPAIL-DGHDVVGKASTGSGKTLAFGIPII 199
Query: 236 QRLLEEREKAAKMLEDKGEEAEKY-APKGHLRALIITPTRELALQVTDH---LKGVAKGI 291
+ L++R K E + +++EK +P ALI++PTRELA Q+ H L +
Sbjct: 200 EHYLDQRGKQ----EGQSDKSEKNKSPI----ALILSPTRELAHQLGKHIGELIANSPDT 251
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
N RV I GGMS +KQ+R L A ++V+GTPGR+WE++S G + ++ + F V+DEAD
Sbjct: 252 NARVALITGGMSIQKQQRQL-ATADIVIGTPGRVWEILSTGTGLIRKMQKIQFLVVDEAD 310
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
R++ GHF+E++ I++ L + ++ + S+ RQTLVFSAT D
Sbjct: 311 RLLSEGHFKEMEHILNALDKHQAGDIADMDEEEEEEEPSN-----RQTLVFSAT--FHKD 363
Query: 412 FRKKLKHGS-LKSKQSVNGLNSIETLSERAGMRA-NVAIVDLTNMCVLANKLEESFIECK 469
++KL S S + ++ S+E L ++ R +D+ +A L+E +EC
Sbjct: 364 LQQKLAGKSRWTSGEMLDNKESMEYLLKKLNFREEKPKFIDVNPESQMAVGLKEGIVECP 423
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + + RT++F SI+A+R I+ LL+ L + V+ LH+ M Q+ARL+
Sbjct: 424 AMEKDLYLYSVLLYYPKHRTLIFTNSISAVRRITQLLQALQLPVFALHSNMAQKARLR 481
>gi|32564046|ref|NP_871838.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
gi|351063670|emb|CCD71884.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
Length = 579
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 190/343 (55%), Gaps = 36/343 (10%)
Query: 190 IYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKML 249
I+ +F EPT IQ A +PAA +DV+GAAETGSGKTLAFG+P++ RLLE
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLES-------- 54
Query: 250 EDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQER 309
D +E E +G RALI+ PTREL +Q+ H+ + + IVGG++ KQER
Sbjct: 55 SDDSQETESTEVRGP-RALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQER 113
Query: 310 LL-KARPEVVVGTPGRLWELMSGGE--KHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
++ + RP++VV TPGRLW +M E + L E L V+DE DRM+E G+F EL I+
Sbjct: 114 IISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHIL 173
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS 426
NK E +++K QTLVFSAT+ + + + K +
Sbjct: 174 ---------NKIHEES----------EKEKLQTLVFSATLTFAK--AQDVAEEEKKKAKE 212
Query: 427 VNGLNSIETLSERAGMRANV-AIVDLTNMCVLANKLEESFIECKE-EDKDAYLYYILSVH 484
++ I+ L + G+R N ++DLT A L E+ I C +KD L Y+L+ +
Sbjct: 213 LSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARINCGNLLEKDTSLVYLLTRY 272
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
GRTIVF SI A R + S+LK + ID LHA+M Q+ RLK
Sbjct: 273 P-GRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLK 314
>gi|308498215|ref|XP_003111294.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
gi|308240842|gb|EFO84794.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
Length = 761
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 190/344 (55%), Gaps = 38/344 (11%)
Query: 189 SIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKM 248
S + F EPTPIQ A +P A +DV+GAAETGSGKTLAFG+PI+ RLLE
Sbjct: 185 SKFLFSFSEPTPIQSAVLPVAVRDHQDVLGAAETGSGKTLAFGIPIVARLLESS------ 238
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
+ EE E P RAL+I PTREL +Q+ H+ + +++ IVGG++ KQ+
Sbjct: 239 -AENDEEEEFKGP----RALVIAPTRELVIQIMRHITALIAPTSLKATSIVGGLAQVKQD 293
Query: 309 RLL-KARPEVVVGTPGRLWELMSGGEK--HLVELHTLSFFVLDEADRMIENGHFRELQSI 365
R++ + RP++VV TPGRLW +M E+ +L E L V+DE DRM+E G+F EL I
Sbjct: 294 RVISQQRPDIVVATPGRLWAMMQEAEEGDYLAEWKNLKCLVVDETDRMVEEGYFAELTHI 353
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ N+ E ++K QTLVFSAT+ + + + K +
Sbjct: 354 L---------NRVHEES----------DKEKLQTLVFSATLTFAK--AQDVAEEEKKKAK 392
Query: 426 SVNGLNSIETLSERAGMRANV-AIVDLTNMCVLANKLEESFIECKE-EDKDAYLYYILSV 483
++ I+ L + G+R N ++DLT A L E+ I C +KD L Y+L+
Sbjct: 393 ELSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARINCGNLLEKDTALVYLLTR 452
Query: 484 HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ QGRTIVF S+ A R + S+LK + D LHA+M Q+ RL+
Sbjct: 453 Y-QGRTIVFVNSVDAARRLYSILKAINSDPMILHAKMIQKQRLR 495
>gi|336262101|ref|XP_003345836.1| hypothetical protein SMAC_07120 [Sordaria macrospora k-hell]
gi|380088610|emb|CCC13496.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 807
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 195/372 (52%), Gaps = 39/372 (10%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P ++ SI +L+F +PT IQ IP G DVIG A TGSGKTLAFG+P+++
Sbjct: 210 WVPLDLSPRMISSIAKLKFTKPTLIQAQAIPQI-MAGHDVIGKASTGSGKTLAFGIPLVE 268
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
L E ++KGE K ALI++PTRELA Q+ DHL+ + KG+
Sbjct: 269 AWLSAEETRK---QNKGE-------KNGATALILSPTRELAQQIRDHLQALCKGLPTAPY 318
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ ++GGM+ +KQ+R L A ++V+ TPGR+WE+MS L L +SF VLDEADR++
Sbjct: 319 ICSVLGGMAVQKQKRQL-AVADIVIATPGRMWEVMSSDNSVLAALRNISFLVLDEADRLL 377
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR------------------KK 396
++G F+E + I L + ++ N Q K
Sbjct: 378 KDGSFKEAEEIFKALDRQAVEENNEDQKMGNTDEEGQEQEEEQSEEEEEEEEEEEEPVNK 437
Query: 397 RQTLVFSATIALSADFRKKLKHG-SLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
RQTLVFSAT F K L+ + KS+ +E L ++ R VD +
Sbjct: 438 RQTLVFSAT------FNKNLQQKLAGKSRFKATSTQDMEYLLQKLNFRETPKFVDANPVH 491
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+A L+E I C + +KD YLY L + R +VF S+ ++R ++ LL+ L + +
Sbjct: 492 QMAENLKEGLIMCGDMEKDLYLYATLMLQPTRRALVFTNSVNSVRRLTPLLENLNLPAFP 551
Query: 516 LHAQMQQRARLK 527
LH+ M Q+ARL+
Sbjct: 552 LHSGMIQQARLR 563
>gi|367040293|ref|XP_003650527.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
gi|346997788|gb|AEO64191.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
Length = 775
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 199/357 (55%), Gaps = 31/357 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L ++ +I RL+F +PT IQ + IP + G DVIG A TGSGKTLAFG+PI++
Sbjct: 196 WVPLGLSQQMLSAIARLKFAKPTAIQASAIPEVMN-GHDVIGKAVTGSGKTLAFGIPIVE 254
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--NVR 294
L KA ++ AEK P ALI++PTRELA Q+ DHLK + G+ +
Sbjct: 255 SWLA---KATNGIQ----TAEKKQPI----ALILSPTRELAHQIADHLKQLCAGLVTSPY 303
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ + GG++ +KQ+R L+ + ++V+GTPGR+WE+MS L L + F V+DEADR++
Sbjct: 304 ICSVTGGLAVQKQQRQLE-KADIVIGTPGRMWEVMSTSNSVLTALRGVGFLVVDEADRLL 362
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
++GHF+E + I+ L T + + R RQTLVFSAT F K
Sbjct: 363 KDGHFKEAEEILKALDRT-----APGDDEEGSDDEDEAPRHSRQTLVFSAT------FNK 411
Query: 415 KLKHGSLKSKQSVNGLN---SIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKE 470
L+ L K N + S+E L ++ R +D + +A L+E I+C +
Sbjct: 412 ALQQ-KLAGKARYNLMGEAESLEYLLKKLNFREPRPKFLDTNPVSQMAENLKEGLIQCGD 470
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L + R ++F SI +R ++S L+ L + LH+ M+Q+ARL+
Sbjct: 471 LEKDLYLYAVLLLQPSRRALIFTNSINTVRRLTSFLQNLNLSASALHSDMEQKARLR 527
>gi|334310507|ref|XP_001370949.2| PREDICTED: ATP-dependent RNA helicase DDX24 [Monodelphis domestica]
Length = 814
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 206/416 (49%), Gaps = 85/416 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ + F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 201 DVSAWKDLFVPEPVLQALSSMGFSAPTPIQALALAPAIRDNLDILGAAETGSGKTLAFAI 260
Query: 233 PIMQRLL----------------------------------------------EER-EKA 245
P++ +L EER E
Sbjct: 261 PMIHSVLRWQDEQKETHHGQAGLHSADGESLGDADDSSDDSNEILNPLPMEREEERDENP 320
Query: 246 AKMLEDKGE--------EAEKYAPKGH------LRALIITPTRELALQVTDHLKGVAKGI 291
+ DK E E EK A GH L L++TPTRELA+QV H+ VAK
Sbjct: 321 SHSPSDKEESGDIKLEFEYEKAA--GHRNRSNPLLGLVLTPTRELAVQVKHHIDAVAKFT 378
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+R +VGGM+ +KQ+R+L RPE+V+ TPGRLWEL+ +HL +L L V+DEAD
Sbjct: 379 GIRTALLVGGMAPQKQQRMLTRRPEIVIATPGRLWELIKEQHQHLSDLKQLRCLVIDEAD 438
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
RM+E GHF EL +++ML N Q +RQT VFSAT+ L
Sbjct: 439 RMVEKGHFVELSQLLEML------NDSQY-------------NPERQTFVFSATLTLVHQ 479
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
++ K+ + ++ ++ L ++ GMR ++DLT L E+ I C +E
Sbjct: 480 APARVFQK--KNAKKIDKTGKLDMLMQKIGMRGKPKVIDLTRKEATVETLTETKIHCDKE 537
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLYY L GRT+VF SI ++ +++LL IL D LHA M Q+ RLK
Sbjct: 538 EKDFYLYYFLLQ-YLGRTMVFANSIDCIKRLTALLSILDRDPLPLHANMHQKQRLK 592
>gi|315040650|ref|XP_003169702.1| ATP-dependent RNA helicase MAK5 [Arthroderma gypseum CBS 118893]
gi|311345664|gb|EFR04867.1| ATP-dependent RNA helicase MAK5 [Arthroderma gypseum CBS 118893]
Length = 743
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 211/375 (56%), Gaps = 31/375 (8%)
Query: 163 ELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAET 222
E V EA++ + AW+ L L L S+ RL+F +PTPIQKA IP G+DVIG A T
Sbjct: 155 EAVEEADV--DVSAWDTLDLRSELQTSLSRLKFAQPTPIQKAAIPEIL-AGRDVIGKAAT 211
Query: 223 GSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTD 282
GSGKTLAFGLPI+Q LL+ +E+ + K ALI++PTRELA Q+
Sbjct: 212 GSGKTLAFGLPILQYLLDRQEQHPSTPSTSSKSHGKTP-----TALILSPTRELAHQLVK 266
Query: 283 HLKGV---AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
HLK V A ++ + I GG+S KQ+R L A +V+VGTPGRLW+++S K L +L
Sbjct: 267 HLKEVTSSAPNVDAYIASITGGLSVHKQQRQL-AEADVIVGTPGRLWDMVSSTPKILTKL 325
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK-KRQ 398
+ F V+DEADR++ GHF+E+ ++ L +K ++ +RQ
Sbjct: 326 RLIKFLVVDEADRLLSEGHFKEVGELLSAL------DKARTSDEDIDDDSEEEDETVERQ 379
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSV--NGLN---SIETLSERAGMR-ANVAIVDLT 452
TLVFSAT F+K L+ K S N L+ S+E L ++ R +D+
Sbjct: 380 TLVFSAT------FQKGLQQKLAKRDNSFHDNLLDKKESMEYLLKKLRFRDEKPRFIDVN 433
Query: 453 NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
+ +A+ L+E IEC +KD YLY +L + + T+VF SI+++R ++ L+ L +
Sbjct: 434 PISQMADNLKEGIIECSAMEKDLYLYAVLLYYPKHCTLVFTNSISSVRRLTHFLQNLNLP 493
Query: 513 VWTLHAQMQQRARLK 527
+LH+ M Q+ARL+
Sbjct: 494 ALSLHSSMAQKARLR 508
>gi|410516913|sp|Q4IBS2.2|MAK5_GIBZE RecName: Full=ATP-dependent RNA helicase MAK5
Length = 781
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 226/416 (54%), Gaps = 42/416 (10%)
Query: 114 EDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTE 173
++G+G KQ+E+ +K G +K + G A+++G D ++E V+ A
Sbjct: 168 KNGAG-NKQDEQLVKAAQGVQKSSTRGGNTFG------ALADGNDYKDQEDVDMA----- 215
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW L L P ++ +I +L+F +PT IQK IP G DVIG A+TGSGKTLAFG+P
Sbjct: 216 --AWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPEIV-AGHDVIGKAQTGSGKTLAFGIP 272
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+++R LE +E+ K + P +L+++PTRELA Q+ DHLK + G+
Sbjct: 273 MVERWLEMQEQGVK----------RTGP----MSLVLSPTRELAKQLGDHLKALCDGLPS 318
Query: 294 --RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
V + GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEAD
Sbjct: 319 APYVCVVTGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEAD 377
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK--RQTLVFSATIALS 409
R+ + G F+E + II L +G + G +++ + RQTLVFSAT
Sbjct: 378 RLFKVGQFKEAEDIIGAL---DGKSPGDDAESEEESDEEDEDDEDAARQTLVFSAT--FD 432
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
D + KL K K S N + L + R +D+ + +A L E IEC
Sbjct: 433 KDLQTKLAG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIECG 489
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+KD YLY +L ++ RT+VF SI+A+R ++ LL L + LH+QM Q+AR
Sbjct: 490 AMEKDLYLYTVLILNPGRRTLVFTNSISAVRRLTPLLTNLNLTALPLHSQMAQKAR 545
>gi|408393250|gb|EKJ72515.1| hypothetical protein FPSE_07152 [Fusarium pseudograminearum CS3096]
Length = 781
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 226/416 (54%), Gaps = 42/416 (10%)
Query: 114 EDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTE 173
++G+G KQ+E+ +K G +K + G A+++G D ++E V+ A
Sbjct: 168 KNGAG-NKQDEQLVKAAQGVQKSSTRGGNTFG------ALADGNDYKDQEDVDMA----- 215
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW L L P ++ +I +L+F +PT IQK IP G DVIG A+TGSGKTLAFG+P
Sbjct: 216 --AWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPEIV-AGHDVIGKAQTGSGKTLAFGIP 272
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+++R LE +E+ K + P +L+++PTRELA Q+ DHLK + G+
Sbjct: 273 MVERWLEMQEQGVK----------RTGP----MSLVLSPTRELAKQLGDHLKALCDGLPS 318
Query: 294 --RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
V + GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEAD
Sbjct: 319 APYVCVVTGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEAD 377
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK--KRQTLVFSATIALS 409
R+ + G F+E + II L +G + G +++ + RQTLVFSAT
Sbjct: 378 RLFKVGQFKEAEDIIGAL---DGKSPGDDAESEEESEDEDEDDEGAARQTLVFSAT--FD 432
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
D + KL K K S N + L + R +D+ + +A L E IEC
Sbjct: 433 KDLQTKLAG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIECG 489
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+KD YLY +L ++ RT+VF SI+A+R ++ LL L + LH+QM Q+AR
Sbjct: 490 AMEKDLYLYTVLILNPGRRTLVFTNSISAVRRLTPLLTNLNLTALPLHSQMAQKAR 545
>gi|358395256|gb|EHK44643.1| hypothetical protein TRIATDRAFT_172944, partial [Trichoderma
atroviride IMI 206040]
Length = 785
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 237/461 (51%), Gaps = 53/461 (11%)
Query: 97 RSSANEEDSGDGDG--DGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVS 154
R + +E G GDG +G+ SG + ++ + GKKK K G K ++ A
Sbjct: 115 RDAVDEPVEGPGDGAVEGENVDSGQAGDSKGGVEGQGGKKKAAGKDGAKKDAGKKQKARK 174
Query: 155 NGPDD-----AEEELVNEA----EISTEFDA-----------------WNELRLHPLLMK 188
+ ++ A++EL A + FDA W EL L ++
Sbjct: 175 DKDNNNKLAAADKELQKPASRKQQQGNSFDALMAVGDAAAAEEADMGAWVELNLSTRILS 234
Query: 189 SIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKM 248
+I +L F +PT IQ+ IP G+DVIG A+TGSGKTLAFG+PI+++ LE
Sbjct: 235 AIAKLGFAKPTLIQEKTIPEIL-AGEDVIGKAQTGSGKTLAFGIPIVEKWLE-------- 285
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--RVVPIVGGMSTEK 306
L ++ ++ P A++++PTRELA Q++DH+K + G+ V + GG+S K
Sbjct: 286 LYEERRNVKREGPT----AVVLSPTRELAKQLSDHIKALCDGLPTAPYVCTVTGGLSIHK 341
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
Q+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+ + G F+E + II
Sbjct: 342 QQRQLE-KADIVIATPGRLWEVLDGDMSLQNSFTKIKFLVVDEADRLFKAGQFKEAEDII 400
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS 426
L + + + RQTLVFSAT + + ++ + K+
Sbjct: 401 GAL---------DRKDPDAEDDDDNEELPPRQTLVFSATFDKNLQSKLAVRGKAPKAGAG 451
Query: 427 VNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ 486
+ +E L + R+ +D+ +A+ L+E IEC +KD YLY +L ++
Sbjct: 452 SSDEEKMEYLMKSLKFRSEPKFIDVNPASQMASGLKEGLIECGAMEKDLYLYTVLVLNPN 511
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
RT+VF SI+A+R ++ LL+ LG+ V LH+QM Q+ARL+
Sbjct: 512 KRTLVFTNSISAVRRLAPLLQNLGLSVLPLHSQMIQKARLR 552
>gi|46121917|ref|XP_385512.1| hypothetical protein FG05336.1 [Gibberella zeae PH-1]
Length = 783
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 226/416 (54%), Gaps = 42/416 (10%)
Query: 114 EDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTE 173
++G+G KQ+E+ +K G +K + G A+++G D ++E V+ A
Sbjct: 168 KNGAG-NKQDEQLVKAAQGVQKSSTRGGNTFG------ALADGNDYKDQEDVDMA----- 215
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW L L P ++ +I +L+F +PT IQK IP G DVIG A+TGSGKTLAFG+P
Sbjct: 216 --AWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPEIV-AGHDVIGKAQTGSGKTLAFGIP 272
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+++R LE +E+ K + P +L+++PTRELA Q+ DHLK + G+
Sbjct: 273 MVERWLEMQEQGVK----------RTGP----MSLVLSPTRELAKQLGDHLKALCDGLPS 318
Query: 294 --RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
V + GG+S KQ+R L+ + ++V+GTPGRLWE++SG + + F V+DEAD
Sbjct: 319 APYVCVVTGGLSILKQQRQLE-KADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEAD 377
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK--RQTLVFSATIALS 409
R+ + G F+E + II L +G + G +++ + RQTLVFSAT
Sbjct: 378 RLFKVGQFKEAEDIIGAL---DGKSPGDDAESEEESDEEDEDDEDAARQTLVFSAT--FD 432
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
D + KL K K S N + L + R +D+ + +A L E IEC
Sbjct: 433 KDLQTKLAG---KGKSSGNDDEKMAYLMKCLKFRGEPKFIDVNPVSQMAEGLREGLIECG 489
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+KD YLY +L ++ RT+VF SI+A+R ++ LL L + LH+QM Q+AR
Sbjct: 490 AMEKDLYLYTVLILNPGRRTLVFTNSISAVRRLTPLLTNLNLTALPLHSQMAQKAR 545
>gi|330797646|ref|XP_003286870.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
gi|325083172|gb|EGC36632.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
Length = 903
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 144/218 (66%), Gaps = 19/218 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L PL++K + L F++PT IQ A +P A G D+IGAA+TGSGKTLAFG+P++Q
Sbjct: 250 WTALNLDPLIIKGLRSLGFEKPTEIQSAVLPVAISNGYDIIGAAQTGSGKTLAFGIPMVQ 309
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-------------------LRALIITPTRELA 277
R+L+ K + +E +GE +K + L +L+I PTRELA
Sbjct: 310 RILQHLRKHGQSVEKEGETRDKQIEEEGDEEEEEEEESTGRSEEHRKLYSLVICPTRELA 369
Query: 278 LQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
+QVT+H+K + N++VV IVGG++ ++Q+R+L RPE+VV TPGRLWEL++ G KHL+
Sbjct: 370 IQVTNHIKSIIAFTNLKVVSIVGGLAQQRQQRILTKRPEIVVATPGRLWELITEGHKHLI 429
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
EL++L +DEADRM+E GHF EL++I+ LP G+
Sbjct: 430 ELNSLLCLGIDEADRMVEQGHFAELENILKTLPTFKGA 467
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
KRQ+ VFSAT+ ++ +H K ++ IE L ER + + ++D T
Sbjct: 538 KRQSFVFSATLVNIPGDNQQNQHQKKKYRKPT----PIEQLIERVRFQRDYKLIDCTMKR 593
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+ A L E+ I C E+KD YLYY + + GRT+VF SI R + + IL + V++
Sbjct: 594 LTAKNLMETKIFCNLEEKDHYLYYFVERYP-GRTLVFVNSIDCARRLIPIFNILEVPVFS 652
Query: 516 LHAQMQQRARLK 527
LHAQMQQ+ RLK
Sbjct: 653 LHAQMQQKQRLK 664
>gi|358057374|dbj|GAA96723.1| hypothetical protein E5Q_03395 [Mixia osmundae IAM 14324]
Length = 750
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 235/453 (51%), Gaps = 62/453 (13%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEE--LVNEAEISTEFD-----AWNEL 180
K + KK+ K K ++I+ +++ + S PDDAE + ++ EFD +
Sbjct: 81 KPSSIKKRTKDTKAEQIRHEDDTASTSAQPDDAEPASGTADADQLLREFDFAHLPGYVPQ 140
Query: 181 RLHPLLMKSIYRLQFKEPTPIQKACIP---AAAHQGKDVIGAAETGSGKTLAFGLPIMQR 237
LHP L ++ L F +PTPIQ+A A KD++G A+TGSGKTLA+GLPI+ +
Sbjct: 141 SLHPALAHAMLELGFSKPTPIQRATFDIMLGADAVLKDIMGIAQTGSGKTLAYGLPILDQ 200
Query: 238 LLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV-----AKGIN 292
+ + + K P+ L ALI+ PTRELA+QV HL V + GI+
Sbjct: 201 IFRQNARWP----------SKEQPR-KLTALILLPTRELAMQVKTHLATVITNASSAGID 249
Query: 293 VR-----------VVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVEL 339
+ +V +VGG+S KQ R L +++V TPGRLWE++ + ++
Sbjct: 250 TKGKGKGPYPFANIVAVVGGISVLKQRRQLAVDRGIDIIVATPGRLWEMIDDDDDLARKI 309
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDML--------------PMTNGSNKGQ-SEQTQ 384
L + VLDEADRM++ GHF EL I+D+ P + +++ + +Q
Sbjct: 310 AALDYLVLDEADRMVQAGHFVELDKILDLTRRGNSSSISHDSSAPDVDIADQDKPDDQAF 369
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN----GLNSIETLSERA 440
+V + +T++FSAT LS D + L L++ +++ +I+ L +
Sbjct: 370 AEQSVRPNGNPRMRTMIFSAT--LSKDLQVNLSIPHLRNLRAIRKAGGSQGAIDDLLLKI 427
Query: 441 GMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAAL 499
R + A+++L++M + L+E F++C +KD YLYY L + GRTIVF ++I +
Sbjct: 428 DFRDPDPALINLSSMQGTVDTLQECFVDCMMTEKDLYLYYFL-IRYPGRTIVFLSAIDGI 486
Query: 500 RHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
R + + K L + V LH+ MQQ+ARL+ Q
Sbjct: 487 RRLQPIFKALRMQVVPLHSGMQQKARLRSLEQF 519
>gi|358057375|dbj|GAA96724.1| hypothetical protein E5Q_03394 [Mixia osmundae IAM 14324]
Length = 751
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 235/453 (51%), Gaps = 62/453 (13%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEE--LVNEAEISTEFD-----AWNEL 180
K + KK+ K K ++I+ +++ + S PDDAE + ++ EFD +
Sbjct: 81 KPSSIKKRTKDTKAEQIRHEDDTASTSAQPDDAEPASGTADADQLLREFDFAHLPGYVPQ 140
Query: 181 RLHPLLMKSIYRLQFKEPTPIQKACIP---AAAHQGKDVIGAAETGSGKTLAFGLPIMQR 237
LHP L ++ L F +PTPIQ+A A KD++G A+TGSGKTLA+GLPI+ +
Sbjct: 141 SLHPALAHAMLELGFSKPTPIQRATFDIMLGADAVLKDIMGIAQTGSGKTLAYGLPILDQ 200
Query: 238 LLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV-----AKGIN 292
+ + + K P+ L ALI+ PTRELA+QV HL V + GI+
Sbjct: 201 IFRQNARWP----------SKEQPR-KLTALILLPTRELAMQVKTHLATVITNASSAGID 249
Query: 293 VR-----------VVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVEL 339
+ +V +VGG+S KQ R L +++V TPGRLWE++ + ++
Sbjct: 250 TKGKGKGPYPFANIVAVVGGISVLKQRRQLAVDRGIDIIVATPGRLWEMIDDDDDLARKI 309
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDML--------------PMTNGSNKGQ-SEQTQ 384
L + VLDEADRM++ GHF EL I+D+ P + +++ + +Q
Sbjct: 310 AALDYLVLDEADRMVQAGHFVELDKILDLTRRGNSSSISHDSSAPDVDIADQDKPDDQAF 369
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN----GLNSIETLSERA 440
+V + +T++FSAT LS D + L L++ +++ +I+ L +
Sbjct: 370 AEQSVRPNGNPRMRTMIFSAT--LSKDLQVNLSIPHLRNLRAIRKAGGSQGAIDDLLLKI 427
Query: 441 GMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAAL 499
R + A+++L++M + L+E F++C +KD YLYY L + GRTIVF ++I +
Sbjct: 428 DFRDPDPALINLSSMQGTVDTLQECFVDCMMTEKDLYLYYFL-IRYPGRTIVFLSAIDGI 486
Query: 500 RHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
R + + K L + V LH+ MQQ+ARL+ Q
Sbjct: 487 RRLQPIFKALRMQVVPLHSGMQQKARLRSLEQF 519
>gi|66911843|gb|AAH96826.1| DDX24 protein [Homo sapiens]
Length = 804
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 318 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 376
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 377 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 436
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 437 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 475
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 476 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 534
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 535 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 578
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
AA D++GAAETGSGKTLAF +P++ +L+ +++ A
Sbjct: 170 AAIRDKLDILGAAETGSGKTLAFAIPMIHAVLQWQKRNA 208
>gi|426377845|ref|XP_004055664.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Gorilla gorilla
gorilla]
Length = 859
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|197101980|ref|NP_001125038.1| ATP-dependent RNA helicase DDX24 [Pongo abelii]
gi|75061972|sp|Q5RDL2.1|DDX24_PONAB RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|55726767|emb|CAH90145.1| hypothetical protein [Pongo abelii]
Length = 859
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKTY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|380814882|gb|AFE79315.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 529 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 587
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 588 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 631
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 248 PVIHAVLQWQKRNA 261
>gi|9966805|ref|NP_065147.1| ATP-dependent RNA helicase DDX24 [Homo sapiens]
gi|18202929|sp|Q9GZR7.1|DDX24_HUMAN RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|9931361|gb|AAG02169.1|AF214731_1 ATP-dependent RNA helicase [Homo sapiens]
gi|10437623|dbj|BAB15079.1| unnamed protein product [Homo sapiens]
gi|12053271|emb|CAB66820.1| hypothetical protein [Homo sapiens]
gi|14250756|gb|AAH08847.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|14424802|gb|AAH09406.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|117645896|emb|CAL38415.1| hypothetical protein [synthetic construct]
gi|119601957|gb|EAW81551.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Homo
sapiens]
gi|123993695|gb|ABM84449.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|124000001|gb|ABM87509.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|208967745|dbj|BAG72518.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
Length = 859
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|355778814|gb|EHH63850.1| hypothetical protein EGM_16904 [Macaca fascicularis]
Length = 856
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 529 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 587
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 588 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 631
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 248 PVIHAVLQWQKRNA 261
>gi|114654532|ref|XP_001151974.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 6 [Pan
troglodytes]
gi|410227214|gb|JAA10826.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410252476|gb|JAA14205.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410299418|gb|JAA28309.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410331293|gb|JAA34593.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
Length = 859
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 163/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L S+ N KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L----------SDSQYN---------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|355693530|gb|EHH28133.1| hypothetical protein EGK_18492 [Macaca mulatta]
gi|387541990|gb|AFJ71622.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 529 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 587
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 588 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 631
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 248 PVIHAVLQWQKRNA 261
>gi|344273652|ref|XP_003408633.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Loxodonta
africana]
Length = 858
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 250 EDKGEEAE-KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
E GE A K P+ L L++TPTRELA+QV H+ VAK +R +VGGMST+KQE
Sbjct: 371 ESNGEIATCKEHPRHPLLGLVLTPTRELAVQVKQHIDAVAKFTGIRTAILVGGMSTQKQE 430
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 431 RMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFDELSQLLEM 490
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L S+ N KRQTLVFSAT+ L ++ H K + ++
Sbjct: 491 L----------SDSQYN---------PKRQTLVFSATLTLVHQAPTRILHK--KHTKKMD 529
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L H GR
Sbjct: 530 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLIETKIHCETDEKDLYLYYFLMQHP-GR 588
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
T+VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 589 TLVFANSISCVKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 632
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 186 DVSAWKNLFVPEGVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 245
Query: 233 PIMQRLLEEREK 244
P++ +L+ ++K
Sbjct: 246 PMIHAVLQWQKK 257
>gi|402877046|ref|XP_003902254.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Papio anubis]
Length = 856
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 529 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 587
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 588 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 631
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 248 PVIHAVLQWQKRNA 261
>gi|194383912|dbj|BAG59314.1| unnamed protein product [Homo sapiens]
Length = 766
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 280 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 338
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 339 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 398
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 399 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 437
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 438 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 496
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 497 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 540
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
D++GAAETGSGKTLAF +P++ +L+ +++ A
Sbjct: 139 DILGAAETGSGKTLAFAIPMIHAVLQWQKRNA 170
>gi|397525830|ref|XP_003832856.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Pan paniscus]
Length = 859
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHVVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|406859182|gb|EKD12251.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 762
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 210/372 (56%), Gaps = 37/372 (9%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EE+ V E T+ AW EL L P + ++ +L F++PT IQ + IP G DV+G A
Sbjct: 186 EEDAVEE---ETDVSAWTELDLSPDTLSALSKLGFQKPTLIQSSAIPEIM-AGHDVVGKA 241
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKTLAFG+PI++ +E + D+ E P ALI++PTRELA Q+
Sbjct: 242 STGSGKTLAFGIPILESWIETYGQL-----DEDELKASRPPT----ALILSPTRELAHQL 292
Query: 281 TDHLKGVAKGINV--RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
T+H+ + KG+ V + GG+S +KQ+R L A+ ++V+GTPGRLWE+MS +
Sbjct: 293 TEHITALCKGLPSAPYVAAVTGGLSVQKQQRQL-AKADIVIGTPGRLWEVMSSSIELTAA 351
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
+ F V+DEADR++ GHFRE + II GS Q + ++ V + RQ
Sbjct: 352 FKKIKFLVVDEADRLLTEGHFREAEQII-------GSLDRQQDADEDDEIVPT-----RQ 399
Query: 399 TLVFSATIALSADFRKKLKHG-SLKSKQSV-NGLNSIETLSERAGMRAN-VAIVDLTNMC 455
TLVFSAT F K L+ + K KQ + + S+E L ++ R + VD+ +
Sbjct: 400 TLVFSAT------FHKGLQQKLAGKGKQGLMDDSESMEYLLKKLNFREDKPKFVDVNPIS 453
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+A L+E +EC +KD YLY +L H RT++F SI ++R ++ LL+ L +
Sbjct: 454 QMAEGLKEGMVECAGTEKDLYLYSLLLYHPNQRTLIFTNSIHSVRRLTPLLQGLNLQANA 513
Query: 516 LHAQMQQRARLK 527
LH+QM Q+AR++
Sbjct: 514 LHSQMAQKARMR 525
>gi|417405017|gb|JAA49234.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 863
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 158/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L +PE+
Sbjct: 383 KAHPKRPLLGLVLTPTRELAVQVKQHMDAVARFTGIKTAILVGGMSTQKQQRMLNRQPEI 442
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 443 VVATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML-------- 494
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 495 --SDSQYN---------PKRQTLVFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLLM 541
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L H GRT+VF SI+
Sbjct: 542 QKIGMRGKPKVIDLTRNEATVETLTETKIHCENDEKDLYLYYFLMQH-PGRTLVFANSIS 600
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 601 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 635
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFTAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 249 PMIHSVLQ 256
>gi|84578997|dbj|BAE72932.1| hypothetical protein [Macaca fascicularis]
Length = 819
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 334 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 392
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 393 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 452
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 453 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 491
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 492 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 550
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 551 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 594
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 151 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 210
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 211 PVIHAVLQWQKRNA 224
>gi|119601958|gb|EAW81552.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_c [Homo
sapiens]
Length = 840
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 250 PMIHAVLQWQKRNA 263
>gi|194386302|dbj|BAG59715.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 330 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 388
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 389 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 448
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 449 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 487
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 488 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 546
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 547 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 590
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 147 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 206
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 207 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 235
>gi|119601956|gb|EAW81550.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Homo
sapiens]
Length = 670
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L------NDSQ-------------YNPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|156060651|ref|XP_001596248.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980]
gi|160409986|sp|A7EAY2.1|MAK5_SCLS1 RecName: Full=ATP-dependent RNA helicase mak5
gi|154699872|gb|EDN99610.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 780
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 213/371 (57%), Gaps = 31/371 (8%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
E L +A E W EL L + ++ ++ F +PTPIQ IP G DV+G A
Sbjct: 200 EALDEDAAGEVEVSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVL-AGHDVVGKAS 258
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TGSGKTLAFG+PI+++ LE ++ ED+ +++ + ALI++PTRELA Q+T
Sbjct: 259 TGSGKTLAFGIPIVEKWLE---VYGELDEDELKKSTRPP-----TALILSPTRELAHQLT 310
Query: 282 DHLKGVAKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
+H+ + KG+ V + GG+S +KQ+R L ++ ++++GTPGRLWE++S + L
Sbjct: 311 EHITTLCKGMPTSPYVAAVTGGLSVQKQQRQL-SKADIIIGTPGRLWEVISSSNELSAGL 369
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQT 399
+ F V+DEADR++ +GHF+E + I++ L T+G+ E T RQT
Sbjct: 370 KQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGNEDDDEEDT----------LPPRQT 419
Query: 400 LVFSATIALSADFRKKLKHG-SLKSKQSV-NGLNSIETLSERAGMRAN-VAIVDLTNMCV 456
LVFSAT F K L+ + K KQS + S+E L ++ R VD+ +
Sbjct: 420 LVFSAT------FHKGLQQKLAGKGKQSFKDDSQSMEYLLKKLNFREEKPKFVDVNPISQ 473
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
+A L+E +EC E+KD YLY +L H RT++F SI ++R ++ +L+ L I +L
Sbjct: 474 MAANLKEGMVECGGEEKDLYLYSLLLHHPNQRTLIFTNSIHSVRRLTPMLQTLNIPAHSL 533
Query: 517 HAQMQQRARLK 527
H+QM Q+AR++
Sbjct: 534 HSQMIQKARMR 544
>gi|62088344|dbj|BAD92619.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 variant [Homo sapiens]
Length = 676
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 379 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 437
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 438 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 497
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 498 L------NDSQ-------------YNPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 536
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 537 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 595
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 596 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 639
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 196 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 255
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 256 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 284
>gi|194385874|dbj|BAG65312.1| unnamed protein product [Homo sapiens]
Length = 609
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 123 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 181
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 182 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 241
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 242 L------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 280
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 281 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 339
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 340 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 383
>gi|335292920|ref|XP_003356831.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sus scrofa]
Length = 856
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 157/272 (57%), Gaps = 22/272 (8%)
Query: 261 PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+V+
Sbjct: 381 PKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEIVIA 440
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGRLWEL+ + HL L L V+DEADRM+E GHF EL +++ML N Q
Sbjct: 441 TPGRLWELVKEKQPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML------NDSQY 494
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA 440
KRQTLVFSAT+ L ++ H K + ++ ++ L ++
Sbjct: 495 -------------NPKRQTLVFSATLTLVHQAPARILHK--KHAKKIDKTAKLDLLMQKI 539
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+ ++
Sbjct: 540 GMRGKPKVIDLTRNEATVETLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSISCIK 598
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 599 RLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 249 PMIHAVLQ 256
>gi|159124341|gb|EDP49459.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus A1163]
Length = 795
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 213/391 (54%), Gaps = 46/391 (11%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
E + + AW+ L L P ++ + +++F PT +Q+ACIP +G DVIG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR-ALIITPTRELALQVTDH- 283
KTLAFG+PI++ LE++ +D + E+ + K ALI++PTRELA Q++ H
Sbjct: 251 KTLAFGIPILEHYLEKKR------DDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHI 304
Query: 284 --LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
L A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ F V+DEADR++ GHF+E++ I++ L E S +RQTLV
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEQILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLV 421
Query: 402 FSATIALSADFRKKL------KHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNM 454
FSAT D ++KL G + K+ S++ L ++ R +D+ +
Sbjct: 422 FSAT--FHRDLQQKLAGKRKWTRGDIMDKK-----ESMDYLLQKLNFREEKPKFIDMNPI 474
Query: 455 CVLANKLEESFIECKEEDK------------------DAYLYYILSVHGQGRTIVFCTSI 496
+A+ L+E +EC +K D +LY +L H + RT+VF SI
Sbjct: 475 SQMADNLKEGIVECGAMEKVSFHMGSVISSLRLMTFQDLFLYTLLLYHPKHRTLVFTNSI 534
Query: 497 AALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+A+R ++ LL+ L + LH+ M Q+ARL+
Sbjct: 535 SAVRRLTKLLQTLQLPALALHSSMAQKARLR 565
>gi|149642575|ref|NP_001092515.1| ATP-dependent RNA helicase DDX24 [Bos taurus]
gi|148878167|gb|AAI46185.1| DDX24 protein [Bos taurus]
gi|296475209|tpg|DAA17324.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Bos taurus]
Length = 852
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 167/292 (57%), Gaps = 24/292 (8%)
Query: 241 EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
+ E+A K+ ++ G PK L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 361 DEEQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVG 418
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 419 GMSTQKQQRMLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 478
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML S+ N KRQTLVFSAT+ L ++ H
Sbjct: 479 ELSQLLEML----------SDSQYN---------PKRQTLVFSATLTLVHQAPARILHK- 518
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 519 -KHAKKMDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKIHCETDEKDLYLYYF 577
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GRT+VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 578 L-MQYPGRTLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 628
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLL 239
P++ +L
Sbjct: 249 PMIDAVL 255
>gi|70991861|ref|XP_750779.1| ATP dependent RNA helicase [Aspergillus fumigatus Af293]
gi|66848412|gb|EAL88741.1| ATP dependent RNA helicase, putative [Aspergillus fumigatus Af293]
Length = 795
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 213/391 (54%), Gaps = 46/391 (11%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
E + + AW+ L L P ++ + +++F PT +Q+ACIP +G DVIG A TGSG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR-ALIITPTRELALQVTDH- 283
KTLAFG+PI++ LE++ +D + E+ + K ALI++PTRELA Q++ H
Sbjct: 251 KTLAFGIPILEHYLEKKR------DDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHI 304
Query: 284 --LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
L A G+N R+ + GG+S +KQ+RLL ++V+GTPGR+WE++S G+ + ++
Sbjct: 305 GELIAQAPGVNARIALLTGGLSVQKQQRLLSG-ADIVIGTPGRVWEILSTGQGLIRKMQQ 363
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ F V+DEADR++ GHF+E++ I++ L E S +RQTLV
Sbjct: 364 IKFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGE--DQASEEESDPSSERQTLV 421
Query: 402 FSATIALSADFRKKL------KHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNM 454
FSAT D ++KL G + K+ S++ L ++ R +D+ +
Sbjct: 422 FSAT--FHRDLQQKLAGKRKWTRGDIMDKK-----ESMDYLLQKLNFREEKPKFIDMNPI 474
Query: 455 CVLANKLEESFIECKEEDK------------------DAYLYYILSVHGQGRTIVFCTSI 496
+A+ L+E +EC +K D +LY +L H + RT+VF SI
Sbjct: 475 SQMADNLKEGIVECGAMEKVSFHMGSVISSLRLMTFQDLFLYTLLLYHPKHRTLVFTNSI 534
Query: 497 AALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+A+R ++ LL+ L + LH+ M Q+ARL+
Sbjct: 535 SAVRRLTKLLQTLQLPALALHSSMAQKARLR 565
>gi|440796416|gb|ELR17525.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 926
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 9/194 (4%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+W LHP LM++I +F PTPIQ+ + AA + KDV+G AETGSGKTLA+GLPI+
Sbjct: 256 SWQHFNLHPTLMEAIKEYKFFSPTPIQEKALTAALREDKDVVGVAETGSGKTLAYGLPIL 315
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+L ++RE+ E G E ++ L+AL++ PTRELA+QV+D LK +AK + V
Sbjct: 316 HKLTKKREQE----ERDGVEKDR-----RLKALLLAPTRELAVQVSDQLKLIAKHTPITV 366
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP++GG++ +KQ RLL +PE+VV TPGRLWEL++GG+ L + L F V+DEADRM+E
Sbjct: 367 VPVIGGLAPQKQVRLLSKKPEIVVATPGRLWELINGGDPFLGDCTGLEFLVIDEADRMVE 426
Query: 356 NGHFRELQSIIDML 369
GHFREL+SII ++
Sbjct: 427 TGHFRELKSIITLI 440
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 81/134 (60%), Gaps = 6/134 (4%)
Query: 396 KRQTLVFSATIALSADFRKKL--KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
KRQT +FSAT+ +++ R KL K + ++ +VN L + L G ++DLT
Sbjct: 572 KRQTFIFSATLTIASQGRAKLGPKPSTNSNRAAVNALAQVSKL---VGFEREKKVIDLTT 628
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
V+ + LEE+ I+C E+KD YLYY H +GRT+VFC SI+ +R + +L +L +
Sbjct: 629 KKVVVSTLEEAVIQCLNEEKDYYLYYFAQQH-KGRTLVFCNSISCIRRLVPILGLLNVPA 687
Query: 514 WTLHAQMQQRARLK 527
W LHA MQQR RLK
Sbjct: 688 WGLHASMQQRQRLK 701
>gi|170595141|ref|XP_001902262.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158590158|gb|EDP28893.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 668
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 194/361 (53%), Gaps = 41/361 (11%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ W L + ++K+I + F EPT IQK IP+A D+IGAAETGSGKTLAFG+
Sbjct: 149 DMSGWINLYISNAVLKAIADMGFTEPTEIQKLVIPSAVRDRFDIIGAAETGSGKTLAFGV 208
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
P+++ LL + + KG +RALI+ PTREL +Q+ +H+ + K
Sbjct: 209 PVVEHLLANQSFLESSEQKKG-----------IRALILAPTRELVMQIRNHIDALLKYTP 257
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEA 350
+V IVGG+S +KQER+LK PE+V+ TPGRL LM+ E L + L V+DE
Sbjct: 258 FKVASIVGGLSLQKQERILKYVPEIVIATPGRLLALMTSAEADSCLSDWSHLQCLVVDET 317
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DRMIE GHF +LQ I+D L K S KK QT VFSAT+ +
Sbjct: 318 DRMIEKGHFEDLQHILDTL------RKNTS--------------KKLQTFVFSATLTYTH 357
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECK 469
K KHG + + + ++ I L E G+R I+D+T A + E+ I C
Sbjct: 358 PASK--KHGDVNADK-IDTDGKISRLIEITGIRKEKHRIIDITGERGTAKTVVEARINCN 414
Query: 470 E-EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID--VWTLHAQMQQRARL 526
+KD L Y+L+ +G GRT+VF S+ A R + +LK L LHA+M Q+ RL
Sbjct: 415 NLLEKDTNLIYLLNRYG-GRTLVFTNSVDASRRLHGILKKLEHKPVPLMLHAKMMQKKRL 473
Query: 527 K 527
K
Sbjct: 474 K 474
>gi|343962287|dbj|BAK62731.1| ATP-dependent RNA helicase DDX24 [Pan troglodytes]
Length = 859
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 373 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 431
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 432 RMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 491
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L S+ N KRQTLVFSAT+ L ++ H K + ++
Sbjct: 492 L----------SDSQYN---------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 530
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 531 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 589
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I LHA M Q+ RL+ Q
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDIMPLILHACMHQKQRLRNLEQF 633
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P++ +L+ +++ A E AP G R
Sbjct: 250 PMIHAVLQWQKRNAAPPPSNTE-----APPGETR 278
>gi|432096748|gb|ELK27327.1| ATP-dependent RNA helicase DDX24 [Myotis davidii]
Length = 790
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 158/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 367 KSHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLHRQPEI 426
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 427 VIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML-------- 478
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 479 --SDSQYN---------PKRQTLVFSATLTLVHQAPARVLHK--KHTKKIDKTAKLDILM 525
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 526 QKIGMRGKPKVIDLTRNEATVETLTETKIHCENDEKDLYLYYFL-MQYPGRTLVFANSIS 584
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 585 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 619
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 152 AVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
A P A+ L + + AW +L + +++++ L F PTPIQ + A
Sbjct: 168 ATPQVPKKAKTWLPEVRDQKADVSAWKDLFVPRPVLRALSALGFSAPTPIQALTLAPAIR 227
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLE 240
D++GAAETGSGKTLAF +P++ +L+
Sbjct: 228 DKLDILGAAETGSGKTLAFAIPMIHSVLQ 256
>gi|403298098|ref|XP_003939872.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Saimiri boliviensis
boliviensis]
Length = 860
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 162/284 (57%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y P+ L L++TPTRELALQV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 374 LDDKSATCKAY-PERPLLGLVLTPTRELALQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 432
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 433 RMLNRYPEIVIATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 492
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 493 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 531
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT A L E+ I C+ ++KD YLYY L + GR
Sbjct: 532 KTAKLDLLMQKIGMRGKPKVIDLTRNEATAETLTETKIHCETDEKDLYLYYFL-MQYPGR 590
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 591 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 634
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 192 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 251
Query: 233 PIMQRLLE-EREKAA 246
P++ +L+ + KAA
Sbjct: 252 PMIHAVLQWHKRKAA 266
>gi|358389222|gb|EHK26814.1| hypothetical protein TRIVIDRAFT_175608 [Trichoderma virens Gv29-8]
Length = 770
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 196/356 (55%), Gaps = 31/356 (8%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW EL L + +I +L F +PT IQ+ IP G DVIG A+TGSGKTLAFG+PI+
Sbjct: 204 AWVELNLSTRTVSAIAKLGFSKPTLIQQKTIPEIL-AGDDVIGKAQTGSGKTLAFGIPIV 262
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV-- 293
++ LE + DK ++ P A++++PTRELA Q++DH+K + G+
Sbjct: 263 EKWLE-------LYVDK-TNVKREGPT----AVVLSPTRELAKQISDHIKALCDGLPTAP 310
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
V + GG+S KQ+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+
Sbjct: 311 YVCTVTGGLSIHKQQRQLE-KADIVIATPGRLWEVLDGDMSLQDSFTKIKFLVVDEADRL 369
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ G F+E + II L + + RQTLVFSAT + +
Sbjct: 370 FKAGQFKEAEDIIGAL----------DRRDPEADDEDDDELPPRQTLVFSAT--FDKNLQ 417
Query: 414 KKLKHGSLKSKQSVNGLNS--IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
KL G K ++ G + +E L + R +D+ + +A+ L+E IEC
Sbjct: 418 SKLA-GRGKGSKAAAGSDEEKMEYLMKCLKFRGQPKFIDVNPVSQMADGLKEGLIECGAM 476
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L ++ RT+VF SI+A+R ++ LL+ LG+ LH+QM Q+ARL+
Sbjct: 477 EKDLYLYTVLVLNPGRRTLVFTNSISAVRRLTPLLQNLGLSALPLHSQMIQKARLR 532
>gi|390598971|gb|EIN08368.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 754
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 199/400 (49%), Gaps = 66/400 (16%)
Query: 176 AWNELR--LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW++ + +HP L+++++ F PTPIQ IP A G+DV+G AETGSGKTLA+GLP
Sbjct: 128 AWHKYKDHVHPKLLRALHAQGFNSPTPIQAQVIPEAG-TGRDVVGIAETGSGKTLAYGLP 186
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL--------- 284
++ LL K + ++ALI+ PTRELALQVT HL
Sbjct: 187 VLTDLLTRSRPKPK-------------SRRAVQALILAPTRELALQVTQHLNACLNNLYD 233
Query: 285 ---------------KGVAKGIN--------VRVVPIVGGMSTEKQERLLKARPEVVVGT 321
KG AK V + ++GGMS +KQ R+L +V+V T
Sbjct: 234 TPEGEGHDGSKTTNGKGKAKVTTEQKKGPPIVSIAAVIGGMSAQKQRRVLDRGVDVLVAT 293
Query: 322 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII----------DMLPM 371
PGRLW+++ + +L L F VLDEADRM+E GH+ EL +I+ D P
Sbjct: 294 PGRLWDVLQEDDALANQLRHLRFLVLDEADRMVEAGHYAELDNILRLTFRGSGDADTSPE 353
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN 431
G +E S Q QT VFSAT +S D ++ LK K
Sbjct: 354 FTGEQAVAAEVEAEEQDARS-QHDGLQTFVFSAT--MSKDLQRNLKQRRKSKKPFKPKTK 410
Query: 432 SIETLSERAGMRANVA----IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
TL + IVDL+ + + L++S +EC DKD YLYY L + G
Sbjct: 411 PQTTLDDLLLRLDFRDPEPKIVDLSPEGGIVSTLKQSKVECLSADKDVYLYYFL-LRYPG 469
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
R++VF ++I +R + LL +LG+ + LH+Q++QR RLK
Sbjct: 470 RSLVFLSAIDGIRRLMPLLDLLGVKAFPLHSQLEQRQRLK 509
>gi|402081834|gb|EJT76979.1| ATP-dependent RNA helicase MAK5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 760
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 199/357 (55%), Gaps = 35/357 (9%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L ++ SI RL+F +PT IQ IP G DVIG A TGSGKTLAFG+PI++
Sbjct: 196 WVPLDLSGEMLSSIARLKFSKPTAIQAQAIPEIL-AGHDVIGKASTGSGKTLAFGIPIVE 254
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
R + + AA ++G++ AL+++PTRELA Q+T+H K + G+
Sbjct: 255 RWISLSQTAASKSPEEGKKP---------IALVLSPTRELAHQITNHFKALCGGLATAPY 305
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ + GG+S KQ+R L+ + ++V+ TPGRLWE++S ++ + + + V+DEADR++
Sbjct: 306 ICSVTGGLSVHKQQRQLE-KADIVIATPGRLWEVLSSSKQTVAAFRHIKYLVVDEADRLL 364
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+GHF++ + I+ L ++ + + RQTLVFSAT F K
Sbjct: 365 SDGHFKDAEEIMRAL-----------DRIETTEDRDNQGPPPRQTLVFSAT------FNK 407
Query: 415 KLKHGSLKSKQSVNGLN---SIETLSERAGMRA-NVAIVDLTNMCVLANKLEESFIECKE 470
L+ L K + N S+E L +R R +D+ + +A +L+E +EC
Sbjct: 408 GLQQ-KLAGKGRFDLNNDALSMEYLLKRLKFREEKPKFIDVNPVSQMAARLKEGLVECDA 466
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLY +L +H T+VF SI+++R ++ +L+ L + LH+QM Q+ARL+
Sbjct: 467 MEKDLYLYSLLLMHPTQHTLVFTNSISSVRRLTPMLQNLTLPALALHSQMPQKARLR 523
>gi|345560201|gb|EGX43326.1| hypothetical protein AOL_s00215g62 [Arthrobotrys oligospora ATCC
24927]
Length = 801
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/382 (37%), Positives = 225/382 (58%), Gaps = 23/382 (6%)
Query: 163 ELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAET 222
E +++ ++ + AW L L P ++++ +L F EPTPIQK IP+ G D+IG A T
Sbjct: 190 EGLSDDDLEVDLPAWESLSLSPYTLQALQKLTFTEPTPIQKLSIPSII-AGHDLIGKAAT 248
Query: 223 GSGKTLAFGLPIMQRLL---EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
GSGKTLAFG+PI + L ++R AK+L ++ +EA+ L ALI++PTRELA Q
Sbjct: 249 GSGKTLAFGIPIFEHWLSSSKDRAVPAKLLSEEDKEADASKLTNPLSALILSPTRELAHQ 308
Query: 280 VTDHLKGV--AKGINV--RVVPIVGGMSTEKQERLL--KARPEVVVGTPGRLWELMSGGE 333
+T+H++ + A G+ VV + GG+S +KQ R L +VVV TPGRLWE++S
Sbjct: 309 ITEHIQALITASGVTSPPHVVSLTGGLSIQKQLRKLGQSGGADVVVATPGRLWEILSEKS 368
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM-TNGSNKGQSEQTQNCV-TVSS 391
+ F V+DEADR+++ GHF+E++ I+D+L + Q+ + + T +
Sbjct: 369 GYTRWFRKTRFLVIDEADRVLQEGHFKEVEQILDVLTRDAEEEDVAQNPEVYGTIKTFKN 428
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKS-KQSVNGL----NSIETLSERAGMR-AN 445
+ K RQ LVFSAT S D ++KL S KS K S +GL +S++ L ++ R +
Sbjct: 429 SKPKDRQMLVFSAT--FSKDLQQKL--SSKKSWKNSNSGLLDDKDSLDYLLKKLPFREEH 484
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
VD+ + +A L E +EC +KD YLYY+L + RT+VF SI+ +R +++L
Sbjct: 485 PQWVDVNPVDQMAENLREGIVECGNMEKDLYLYYLLLRY-PLRTLVFTNSISTVRRLTNL 543
Query: 506 LKILGIDVWTLHAQMQQRARLK 527
+ L + V L++ M Q+ARL+
Sbjct: 544 FQNLELSVNGLNSNMIQKARLR 565
>gi|440905703|gb|ELR56052.1| ATP-dependent RNA helicase DDX24 [Bos grunniens mutus]
Length = 850
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 167/292 (57%), Gaps = 24/292 (8%)
Query: 241 EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
+ E+A K+ ++ G PK L L++TPTRELA+QV H+ VAK +++ +VG
Sbjct: 361 DEEQAGKLKQELG--GSTVPPKRPLLGLVLTPTRELAVQVKQHVDAVAKFTSIKTAILVG 418
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+RLL +PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 419 GMSTQKQQRLLNRQPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 478
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL ++++L S+ N KRQTLVFSAT+ L ++ H
Sbjct: 479 ELSQLLEVL----------SDSQYN---------PKRQTLVFSATLTLVHQAPARILHK- 518
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 519 -KHAKKMDKTAKLDLLMQKIGMRGKPKVIDLTRKEATVETLTETKIHCETDEKDLYLYYF 577
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GRT+VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 578 L-MQYPGRTLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 628
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLL 239
P++ +L
Sbjct: 249 PMIDAVL 255
>gi|390352859|ref|XP_784112.3| PREDICTED: ATP-dependent RNA helicase DDX24-like
[Strongylocentrotus purpuratus]
Length = 934
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 158/265 (59%), Gaps = 27/265 (10%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
L L++TPTRELA+QV +HL AK N++V +VGGMS EKQ+R+LK RP+++VGTPGR
Sbjct: 458 LFGLVLTPTRELAVQVKNHLVAAAKKTNIKVAVVVGGMSAEKQKRVLKKRPDIIVGTPGR 517
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LWEL GE HL L + ++DEADRM+E GH+ EL I+D+L
Sbjct: 518 LWELYQLGEPHLASLPDVKCLIIDEADRMVEKGHYAELSEILDILN-------------- 563
Query: 385 NCVTVSSLQRKKRQTLVFSATIALS--ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGM 442
+S QR RQT VFSAT++L RK LK + K+ + ++++ + G+
Sbjct: 564 -----TSEQRSSRQTFVFSATLSLIHLGPLRKSLKKAYKQDKK-----DKLDSVMAKIGI 613
Query: 443 RANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
+ + +VDLT A+ L ES I C E+KD YL+Y L + GRT+VF SI +R +
Sbjct: 614 KEDAEVVDLTKREGTASSLLESKIVCAVEEKDIYLFYFLRQY-PGRTLVFTNSIDCIRRL 672
Query: 503 SSLLKILGIDVWTLHAQMQQRARLK 527
+S+L +L LH+ M Q+ RLK
Sbjct: 673 ASILTLLDCKPLPLHSSMHQKQRLK 697
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 4/86 (4%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+G D A E++ +E +ST W+ L + ++ +S+ + F PTPIQ CIPAA ++GK
Sbjct: 232 SGEDTAGEKISSEVSMST----WDTLSIPTVVHESLQTMGFASPTPIQAGCIPAAINEGK 287
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLE 240
D++GAAETGSGKTLAFG+P++ R+L+
Sbjct: 288 DIVGAAETGSGKTLAFGIPLIYRILQ 313
>gi|395827747|ref|XP_003787057.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Otolemur garnettii]
Length = 861
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 158/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+LK PE+
Sbjct: 384 KAYPKHPLLGLVLTPTRELAVQVRQHIDAVAKFTGIKTAILVGGMSTQKQQRMLKRCPEI 443
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N
Sbjct: 444 VIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML------ND 497
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
Q KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 498 SQYN-------------PKRQTLVFSATLTLIHQVPARILHK--KHTKKMDKTAKLDLLM 542
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR+ ++DLT L E+ I C+ ++KD YLYY L + GR++VF SI+
Sbjct: 543 QKIGMRSKPKVIDLTRKEATVETLTETKIHCETDEKDFYLYYFL-MQYPGRSLVFANSIS 601
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 602 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 636
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
P A+ + ++ + AW +L + +++++ L F PTPIQ + A D+
Sbjct: 172 PKQAKTWMPEVSDQKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDI 231
Query: 217 IGAAETGSGKTLAFGLPIMQRLLE 240
+GAAETGSGKTLAF +P++ +L+
Sbjct: 232 LGAAETGSGKTLAFAIPVIHAVLQ 255
>gi|169618601|ref|XP_001802714.1| hypothetical protein SNOG_12492 [Phaeosphaeria nodorum SN15]
gi|118574276|sp|Q0U6X2.1|MAK5_PHANO RecName: Full=ATP-dependent RNA helicase MAK5
gi|111059185|gb|EAT80305.1| hypothetical protein SNOG_12492 [Phaeosphaeria nodorum SN15]
Length = 817
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 231/444 (52%), Gaps = 46/444 (10%)
Query: 108 GDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNE 167
DGDG+ + + K+E K KK KK E S + GP A + L N
Sbjct: 183 ADGDGEAEPKKMNKRERAAEKKRIAALAKKTKKPDDD---EASEGKTFGPG-AFDILANR 238
Query: 168 AEISTEF---DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
A+ + AW EL L +++S+ +L+F +PT IQ + IP G+DVIG A TGS
Sbjct: 239 ADDEDDEVDVSAWEELELSTKILESLAKLKFSKPTTIQASTIPEI-MAGRDVIGKASTGS 297
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAFG+PI++ L + K+ + + P ALII PTRELA Q+T HL
Sbjct: 298 GKTLAFGIPIIESYLASKSKSKDV--------KDKTP----LALIIAPTRELAHQITAHL 345
Query: 285 KGV-AKGI--NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
+ AKG + + GG++ +KQ R L+ + +++VGTPGRLWE++S G L ++
Sbjct: 346 TALCAKGAFEAPLIASVTGGLAVQKQRRQLE-KADIIVGTPGRLWEVISTGHGLLEKVKQ 404
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ F V+DEADR++ G+++EL I+ +L + + +RQTLV
Sbjct: 405 IRFLVVDEADRLLSQGNYKELGEILKILE--------KDAPAEGEAEAEETTEVERQTLV 456
Query: 402 FSATI--ALSADFRKKLKHGS--LKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCV 456
FSAT L K K GS L SKQ S+E L ++ R +D
Sbjct: 457 FSATFQKGLQQKLAGKAKGGSDNLMSKQ-----QSMEYLLKKINFREEKPKFIDANPSSQ 511
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
+A+KL+E IEC +KD YLY +L + + R ++F SI+A+R ++ L+ L + L
Sbjct: 512 MASKLKEGLIECAGTEKDLYLYSLLMFYPKKRALIFTNSISAVRRLTPFLQNLALPALPL 571
Query: 517 HAQMQQRARLKLFSQMITWIRKRP 540
H+ M Q+ARL+ I ++RP
Sbjct: 572 HSSMAQKARLR----SIERFKERP 591
>gi|440638151|gb|ELR08070.1| hypothetical protein GMDG_02897 [Geomyces destructans 20631-21]
Length = 741
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 41/392 (10%)
Query: 158 DDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVI 217
D+AE+E + E W EL L ++ ++ ++ F PTPIQ+ IP G DVI
Sbjct: 205 DEAEDEDMTE---------WAELNLSTAMLSALAKIGFTTPTPIQQEAIPEVL-SGNDVI 254
Query: 218 GAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELA 277
G A TGSGKTLAFG+PI++R L++ E ED E A + + ALI++PTRELA
Sbjct: 255 GKASTGSGKTLAFGIPIIERWLQDNEGR----ED--ETATEKKTQKSATALILSPTRELA 308
Query: 278 LQVTDHLKGVAKGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
Q+TDHL + KG++ + + GG++ +KQ+R L AR ++++GTPGRLWE++S G +
Sbjct: 309 HQLTDHLTKLCKGLSDAPFIATVTGGLAIQKQQRQL-ARADIIIGTPGRLWEVLSSGIEL 367
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L TL F V+DEADR++ GHF+E + II L + + + ++ VT
Sbjct: 368 SKSLKTLKFLVVDEADRLLTEGHFKEAEEIISKLDRHDADD-----EEEHVVT------- 415
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
RQTLVFSAT+A ++KL S + G + +E L ++ + +D+
Sbjct: 416 -RQTLVFSATLAKG--LQQKL------SGKGRLGDDGMEYLMKKLKFKGEPKFIDVAT-S 465
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+A L+E IEC +KD YLY +L H +TI+F SI + ++ LL L T
Sbjct: 466 AMAEGLKEGVIECGATEKDLYLYTLLLHHPNLKTIIFTNSIHTAQRLTPLLANLNYFPVT 525
Query: 516 LHAQMQQRARLKLFSQMITWIRKRPKGDRGKD 547
LH+ M Q+ARL+ + + + RG D
Sbjct: 526 LHSNMPQKARLRSIERFSSLLVATDVAARGLD 557
>gi|109084685|ref|XP_001097132.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 5 [Macaca
mulatta]
Length = 856
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 160/284 (56%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGXXXXXLVGGMSTQKQQ 429
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQY-------------NPKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 529 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 587
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 588 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 631
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLEEREKAA 246
P++ +L+ +++ A
Sbjct: 248 PVIHAVLQWQKRNA 261
>gi|402225555|gb|EJU05616.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 752
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 259/506 (51%), Gaps = 81/506 (16%)
Query: 86 PGKKLNSKKRKRSSA---------------NEEDSGDGDGDGDEDGSGVQKQEEKNLK-- 128
P SKKR++SS +E D G G+ E+G + +E N++
Sbjct: 39 PDNTQRSKKRRKSSDPTVGVATEDVDELPWHEVDRPKGSGEFTEEGGMLMLEEVDNVEVT 98
Query: 129 --NETGKKK--KKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAE-------ISTEFDAW 177
+ G +K K + KGK++ ESV A+ + + FD +
Sbjct: 99 YEEQAGGRKVAKFRVKGKQLNKKGESVISGISHKTAQPSKPRSVQPAAPILGVEQSFDEY 158
Query: 178 --NELRLHPL---LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E +L PL + +S++ L F +PT IQ IP A QG+D+IG AETGSGKTLA+GL
Sbjct: 159 LIPEWQLFPLKNQIKRSLHGLGFTKPTEIQSRSIPIAL-QGRDIIGVAETGSGKTLAYGL 217
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+ +LL K A ++ + + L ALI+ PTRELALQV +HL+ V + +N
Sbjct: 218 PIINQLLV---KYAGVIPPE---------QRTLSALILAPTRELALQVGEHLRAVVEQVN 265
Query: 293 --------------------VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGG 332
+ + IVGGMS KQ R+++ ++++ TPGRLW+L+
Sbjct: 266 PSISKEGVKEDKKGPRGPPLISIGGIVGGMSNLKQRRIIERGMDIMIATPGRLWDLLGED 325
Query: 333 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML-------PMTNGSNKGQSEQTQN 385
+ ++ + F VLDEADRMIE GHF EL +I+ + + + SN
Sbjct: 326 DSLAQQVRAIRFLVLDEADRMIETGHFEELHNILRLTRRDSEGDAIDDASNIAFQRAGIE 385
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFR---KKLKHGSLKSKQSVNGLNSIETLSERAGM 442
+ QT VFSAT LS D + KK K G + K+ N ++++ L ER
Sbjct: 386 VTAGGGSTSENMQTFVFSAT--LSRDLQMNLKKRKRGPPR-KKGENPPSTLDELLERLDF 442
Query: 443 R-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
R I+DLT +++ L+E+ +EC +KD YLYY L + GR++VF ++I +R
Sbjct: 443 RDEQPEIIDLTPEQGVSHTLQEAKLECVSAEKDLYLYYFLLRY-PGRSLVFVSAIDGIRR 501
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLK 527
I +L++LG++V+ LH+Q+QQ+ RLK
Sbjct: 502 IVPMLELLGVNVFPLHSQLQQKQRLK 527
>gi|410962873|ref|XP_003987993.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Felis catus]
Length = 856
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 158/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 375 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 434
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 435 VIATPGRLWELIKEKHPHLSNLKQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 486
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTL+FSAT+ L ++ H K + ++ ++ L
Sbjct: 487 --SDSQYN---------PKRQTLIFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLLV 533
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 534 QKIGMRGKPKVIDLTRNEATVETLTETKIHCEADEKDFYLYYFL-MQYPGRTLVFANSIS 592
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 593 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 627
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 248 PMIHAVLQ 255
>gi|149737471|ref|XP_001498017.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Equus caballus]
Length = 857
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 158/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 380 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 439
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 440 VVATPGRLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 491
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 492 --SDSQYN---------PKRQTLVFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLLM 538
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ G+R ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 539 QKIGLRGKPKVIDLTRNEATVETLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSIS 597
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 598 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 632
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 98 SSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESV--AVSN 155
S+ E + D + + DG+G E + +E+ + KKK KK K E+
Sbjct: 111 STREECEVKDAEPEAQGDGTGCPDPEVGEMASESPAQTIPKKKKKKGKKKMEASQGTTPK 170
Query: 156 GPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
GP A+ + + + AW +L + +++++ L F PTPIQ + A D
Sbjct: 171 GPKKAKTWMPEMRDQKADVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLD 230
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLE 240
++GAAETGSGKTLAF +P++ +L+
Sbjct: 231 ILGAAETGSGKTLAFAIPMIHAVLQ 255
>gi|260949921|ref|XP_002619257.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
gi|238846829|gb|EEQ36293.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
Length = 801
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 199/359 (55%), Gaps = 36/359 (10%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + L + + L FK+PTPIQK+ IP A +GKDVIG A TGSGKTLA+G+PI++
Sbjct: 215 WQNVPLSAYTLSGLQALGFKQPTPIQKSAIPLAL-EGKDVIGKATTGSGKTLAYGIPILE 273
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR-- 294
+ + +K+ E K +K P +I PTRELA QV+DHL +AK +
Sbjct: 274 KYI------SKIAEIKTLRQKKTIPAPT--GIIFAPTRELAHQVSDHLNKIAKYAPLASN 325
Query: 295 -VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+V + GG+S ++QERLL P ++V TPGR EL+ E+ + VLDEADR+
Sbjct: 326 GIVSVTGGLSIQRQERLLSYGPGIIVATPGRFLELIEKSEEFTKRMALTEIIVLDEADRL 385
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+++GHF E + I+D+L G N+ ++ + QTLVFSAT S D
Sbjct: 386 LQDGHFEEFERILDLL----GKNRDKAYGW------------RWQTLVFSAT--FSRDLF 427
Query: 414 KKLKHGSLKSKQSVNGLNS----IETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIEC 468
KL +K S L + ++ L ++ + + A+ D +++ ++ E+ +EC
Sbjct: 428 FKLDKSGKGTKASSGALVANDEILQLLQKKLKFKDSKPALCDANPKEIVSGQITEALVEC 487
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
++D YLYY + ++ G T+VF S+ ++R + LL+ L I +++H+ M Q+ R++
Sbjct: 488 GPAERDLYLYYFVLMY-PGSTLVFANSVESVRRLVPLLENLNIPAFSIHSSMIQKQRMR 545
>gi|345803790|ref|XP_537542.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Canis lupus
familiaris]
Length = 852
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+
Sbjct: 374 KVHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEI 433
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 434 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 485
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
G S+ KRQTL+FSAT+ L ++ H K + ++ ++
Sbjct: 486 GDSQYN-----------PKRQTLIFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLFV 532
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 533 QKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSIS 591
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 592 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 626
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 248 PMIHTVLQ 255
>gi|297298507|ref|XP_002805221.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 770
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/284 (40%), Positives = 160/284 (56%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELA+QV H+ VA+ +VGGMST+KQ+
Sbjct: 285 LDDKSATCKAY-PKRPLLGLVLTPTRELAVQVKQHIDAVARFTGXXXXXLVGGMSTQKQQ 343
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L RPE+VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 344 RMLSRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 403
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 404 L------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 442
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 443 KTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGR 501
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 502 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 545
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
D++GAAETGSGKTLAF +P++ +L+ +++ A
Sbjct: 144 DILGAAETGSGKTLAFAIPVIHAVLQWQKRNA 175
>gi|426248528|ref|XP_004018015.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ovis aries]
Length = 852
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 156/272 (57%), Gaps = 22/272 (8%)
Query: 261 PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
P+ L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L +PE+V+
Sbjct: 376 PRRPLLGLVLTPTRELAVQVKQHVDAVAKFTGIKTAILVGGMSTQKQQRMLNRQPEIVIA 435
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 436 TPGRLWELVKEKHPHLSNLQQLRCLVIDEADRMVEKGHFAELSQLLEML----------- 484
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA 440
+C KRQTLVFSAT+ L ++ H K + ++ ++ L ++
Sbjct: 485 ---SDC-----QYNPKRQTLVFSATLTLVHQAPARILHK--KHAKKIDKTAKLDLLMQKI 534
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+ ++
Sbjct: 535 GMRGKPKVIDLTRKEATVETLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSISCIK 593
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 594 RLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 625
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLL 239
P++ +L
Sbjct: 249 PMIDAVL 255
>gi|320581609|gb|EFW95829.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Ogataea parapolymorpha DL-1]
Length = 705
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 195/356 (54%), Gaps = 48/356 (13%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L ++ + +L F++PT IQKA IP A GKDVIG A TGSGKTLA+G+PI++
Sbjct: 160 WSSLNLSASTLQGLQKLGFQKPTEIQKATIPLAV-DGKDVIGKAITGSGKTLAYGIPILE 218
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR-- 294
+ L +++ HL +I TPTRELA QV HL+ + K
Sbjct: 219 KALSNKQE-------------------HLNGIIFTPTRELANQVMKHLQELFKYTPFHDK 259
Query: 295 -VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
V+ + GG+S +KQERLL +P VVV TPGR E++ ++ V+L + V DEADR+
Sbjct: 260 AVISLTGGLSIQKQERLLGYKPRVVVATPGRFLEILEKKTENAVQLASADILVCDEADRL 319
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA--LSAD 411
+++GHF EL I+++L +G K Q+LVFSAT + L
Sbjct: 320 LQDGHFDELGKILEILHNHRPKVQGH----------------KFQSLVFSATFSQDLFGK 363
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
K KH S+Q++ ++ LS+ R+ VD+ ++A+ + E+ I C +
Sbjct: 364 LEKAKKH-VFDSEQAI-----VKMLSKHLKFRSKPEYVDVNPTEIVAHSITEAMIPCGAQ 417
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
++D LYY L++ G T+VF +I +++ ++ +L LGI +LH+ M Q+ RL+
Sbjct: 418 ERDLMLYYFLTMF-PGVTLVFANAIDSVKRLAPMLNNLGIPTVSLHSSMIQKQRLR 472
>gi|291413819|ref|XP_002723168.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Oryctolagus
cuniculus]
Length = 848
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 157/280 (56%), Gaps = 22/280 (7%)
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
G A + P L L++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L
Sbjct: 366 GAAAWEAPPARPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLN 425
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
PE+V+ TPGRLWEL+ HL L L VLDEADRM+E GHF EL +++ML
Sbjct: 426 RHPEIVIATPGRLWELIKERHSHLSNLRQLRCLVLDEADRMVEKGHFAELSQLLEML--- 482
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
N Q +RQTLVFSAT+ L +L H K + ++
Sbjct: 483 ---NDSQ-------------YNPQRQTLVFSATLTLVHQLPARLLHK--KHTKKMDKTAK 524
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
++ L ++ GMR ++DLT L E+ I C+ E+KD YLYY L + GR++VF
Sbjct: 525 LDLLVQKVGMRGKPKVIDLTRNEATVETLTETKIHCETEEKDLYLYYFL-MQYPGRSLVF 583
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 584 ANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 623
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 98 SSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNG- 156
S+ NE D + + DG+ E + +E+ KKK KK E+ +
Sbjct: 109 STQNEADVSSAEPESQADGAACPGPEGGEMASESLPHTVPKKKKKKGNKKLEASQSTPPK 168
Query: 157 -PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
P A+ L + + AW +L + +++++ L F PTPIQ + A D
Sbjct: 169 VPKKAKTWLPEVRDQQADVSAWKDLFVPTPVLRALSFLGFSAPTPIQALTLAPAIRDKLD 228
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLE 240
++GAAETGSGKTLAF +P++ +L+
Sbjct: 229 ILGAAETGSGKTLAFAIPMIHAVLQ 253
>gi|395323772|gb|EJF56229.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 200/405 (49%), Gaps = 72/405 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ +LHP L +++Y +F PTPIQ +P A + KDV+G AETGSGKTLA+GLPI+
Sbjct: 132 WHSFKLHPQLARALYAKKFTTPTPIQAQTLPLAL-KNKDVVGVAETGSGKTLAYGLPILH 190
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--- 293
LL E + +RAL++ PTRELALQV+ HL ++V
Sbjct: 191 YLLTEA---------YSRPIPSNKTRRPVRALVLAPTRELALQVSSHLNACLSSMDVDAV 241
Query: 294 -----------------------------------------RVVPIVGGMSTEKQERLLK 312
V +VGGMS +KQ R++
Sbjct: 242 ENKTGDDEVSKKGKNKGKAKAKAKAAETPALENKPKHPPLVSVAAVVGGMSAQKQRRIIS 301
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML--- 369
+V+V TPGRLW+++ ++ ++ L F VLDEADRMIE GHF EL +I+ +
Sbjct: 302 RGVDVLVATPGRLWDILQEDDELATQIEFLRFLVLDEADRMIETGHFAELDNILRLTLRK 361
Query: 370 ---PMTNGSNK-GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ NK + E T++ V L QT VFSAT LS D ++ LK + +
Sbjct: 362 SDDDVIEPENKMDEEEDTKDGVRGGDL-----QTFVFSAT--LSKDLQQNLKRRARPKAR 414
Query: 426 SVN---GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILS 482
+ L + A+VD+ + L ES ++C DKDAYLYY L
Sbjct: 415 RKADKPASTLDDLLLRLDFRDPSPAVVDIAPASRVPAALTESRVDCLAADKDAYLYYFL- 473
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ GRT+VF ++I +R + LL +LG+ + LH+Q++QR RLK
Sbjct: 474 LRYPGRTLVFLSAIDGIRRLLPLLALLGVPAFQLHSQLEQRQRLK 518
>gi|340514381|gb|EGR44644.1| predicted protein [Trichoderma reesei QM6a]
Length = 734
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 197/355 (55%), Gaps = 30/355 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W EL L ++ +I +L F +PT IQ+ IP G+DVIG A+TGSGKTLAFG+PI++
Sbjct: 172 WVELNLSTRVVSAIAKLGFSKPTLIQQKTIPEIL-AGEDVIGKAQTGSGKTLAFGIPIVE 230
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
+ LE + DK A++ P A++++PTRELA Q++DH+K + G+
Sbjct: 231 KWLE-------LYVDKAN-AKREGPT----AVVLSPTRELAKQLSDHIKALCDGLPTAPY 278
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V + GG+S +KQ+R L+ + ++V+ TPGRLWE++ G + F V+DEADR+
Sbjct: 279 VCTVTGGLSIQKQQRQLE-KADIVIATPGRLWEVLDGDMSLQDSFTKIKFLVVDEADRLF 337
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ G F+E + II L + RQTLVFSAT + +
Sbjct: 338 KAGQFKEAEDIIGAL---------DRRDPEADEDDEGDDLPPRQTLVFSAT--FDKNLQS 386
Query: 415 KLKHGSLKSKQSVNGLNS--IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
KL G K ++ G + +E L + R +D+ + +A L+E IEC +
Sbjct: 387 KLA-GRGKGPKAAAGSDEEKMEYLMKCLKFRGEPKYIDVNPVSQMAEGLKEGLIECGAME 445
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
KD YLY +L ++ RT+VF SI+A+R ++ LL+ LG+ LH+QM Q+ARL+
Sbjct: 446 KDLYLYTVLVLNPGRRTLVFTNSISAVRRLTPLLQNLGLSALPLHSQMIQKARLR 500
>gi|341883047|gb|EGT38982.1| hypothetical protein CAEBREN_08481 [Caenorhabditis brenneri]
Length = 736
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 217/413 (52%), Gaps = 53/413 (12%)
Query: 133 KKKKKKKKGKKIKTVEESV----AVSNGPDDAE--------EELVNEAEISTEFDAWNEL 180
K+KK++ KK K EE V A + G ++ + E + T+ AW +L
Sbjct: 97 KQKKERLARKKQKLAEEGVNEVEAATEGNENKQKKKRSAQVENKTKSKKAKTDISAWEKL 156
Query: 181 RLHPL-LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLL 239
P +++++ R+ F +PT IQ A +P A DV+GAAETGSGKTLAFG+P++ RLL
Sbjct: 157 FFLPTEILQAVERMGFSQPTEIQSAVLPIAVRDRMDVLGAAETGSGKTLAFGIPLVSRLL 216
Query: 240 EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIV 299
++ + + P RALII PTREL +Q+ H+ + + ++ IV
Sbjct: 217 DDISSG---------DQKSSGP----RALIIAPTRELVIQIMRHINALIETTPLKATSIV 263
Query: 300 GGMSTEKQERLL-KARPEVVVGTPGRLWELMSGGEK--HLVELHTLSFFVLDEADRMIEN 356
GG++ KQ+R++ + RP+++V TPGRLW ++ + +L E L V+DE DRM+E
Sbjct: 264 GGLAQVKQDRVISQQRPDILVATPGRLWAMIQEANEGDYLAEWRNLKCLVVDETDRMVEE 323
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G+F EL I+ NK E C R+K QTLVFSAT+ + + +
Sbjct: 324 GYFAELTHIL---------NKVHEE----C------DREKLQTLVFSATLTFAKS--QGV 362
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKE-EDKD 474
K + ++ I+ L + G+R +VDLT A L E+ + C +KD
Sbjct: 363 AEEEKKKAKELSTQQKIQRLIKLTGLRETKHKVVDLTRQTGTAGCLVEARLNCGNLLEKD 422
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L Y+LS + GRTIVF S+ A R + +LK + ID LHA+M Q+ RL+
Sbjct: 423 TSLVYLLSRYA-GRTIVFVNSVDAARRLHCILKAVNIDPMILHAKMVQKHRLR 474
>gi|312088074|ref|XP_003145719.1| hypothetical protein LOAG_10144 [Loa loa]
Length = 699
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 207/386 (53%), Gaps = 42/386 (10%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
E++++VSN + +E E I + W L + ++K+I + F EP IQ+ IP
Sbjct: 110 EKTMSVSNEEIEYDEVDGREDGIP-DMSGWINLYISNTVLKAIADMGFTEPMEIQRLVIP 168
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
+A D+IGAAETGSGKTLAFG+P+++RLL + A E +E+ K +RA
Sbjct: 169 SAIRDRFDIIGAAETGSGKTLAFGVPVVERLLANQSFA--------ESSEQ---KKSIRA 217
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+ PTREL +Q+ +H+ + K + +V IVGG+S +KQER+LK PE+V+ TPGRL
Sbjct: 218 LILAPTRELVMQIRNHIHALLKYTSFKVASIVGGLSLQKQERILKYVPEIVIATPGRLLA 277
Query: 328 LMSGGEKH--LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
LM+ E L + L V+DE DRMIE GHF +LQ I+D++ K S
Sbjct: 278 LMTSAEADSCLSDWSNLQCLVVDETDRMIEKGHFEDLQHILDII------RKNTS----- 326
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
KK QT VFSAT+ + L S S ++ I L E G+R
Sbjct: 327 ---------KKLQTFVFSATLTYTHPV---LNKRSDVSATKMSADEKISRLIEITGIRKE 374
Query: 446 V-AIVDLTNMCVLANKLEESFIECKE-EDKDAYLYYILSVHGQGRTIVFCTSIAALRHIS 503
I+D+T A + E+ I C +KD L Y+L+ + GRT+VF S+ A R +
Sbjct: 375 KHKIIDITGERGTAKAVVEARINCNNLLEKDTSLIYLLNRYA-GRTLVFTNSVDASRRLH 433
Query: 504 SLLKILGID--VWTLHAQMQQRARLK 527
+LK L LHA+M Q+ RLK
Sbjct: 434 GILKQLEHKPVPLMLHAKMMQKKRLK 459
>gi|393907272|gb|EFO18351.2| hypothetical protein LOAG_10144 [Loa loa]
Length = 698
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 207/386 (53%), Gaps = 42/386 (10%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
E++++VSN + +E E I + W L + ++K+I + F EP IQ+ IP
Sbjct: 109 EKTMSVSNEEIEYDEVDGREDGIP-DMSGWINLYISNTVLKAIADMGFTEPMEIQRLVIP 167
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
+A D+IGAAETGSGKTLAFG+P+++RLL + A E +E+ K +RA
Sbjct: 168 SAIRDRFDIIGAAETGSGKTLAFGVPVVERLLANQSFA--------ESSEQ---KKSIRA 216
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+ PTREL +Q+ +H+ + K + +V IVGG+S +KQER+LK PE+V+ TPGRL
Sbjct: 217 LILAPTRELVMQIRNHIHALLKYTSFKVASIVGGLSLQKQERILKYVPEIVIATPGRLLA 276
Query: 328 LMSGGEKH--LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
LM+ E L + L V+DE DRMIE GHF +LQ I+D++ K S
Sbjct: 277 LMTSAEADSCLSDWSNLQCLVVDETDRMIEKGHFEDLQHILDII------RKNTS----- 325
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
KK QT VFSAT+ + L S S ++ I L E G+R
Sbjct: 326 ---------KKLQTFVFSATLTYTHPV---LNKRSDVSATKMSADEKISRLIEITGIRKE 373
Query: 446 V-AIVDLTNMCVLANKLEESFIECKE-EDKDAYLYYILSVHGQGRTIVFCTSIAALRHIS 503
I+D+T A + E+ I C +KD L Y+L+ + GRT+VF S+ A R +
Sbjct: 374 KHKIIDITGERGTAKAVVEARINCNNLLEKDTSLIYLLNRYA-GRTLVFTNSVDASRRLH 432
Query: 504 SLLKILGID--VWTLHAQMQQRARLK 527
+LK L LHA+M Q+ RLK
Sbjct: 433 GILKQLEHKPVPLMLHAKMMQKKRLK 458
>gi|301777516|ref|XP_002924172.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Ailuropoda
melanoleuca]
gi|281354104|gb|EFB29688.1| hypothetical protein PANDA_013454 [Ailuropoda melanoleuca]
Length = 853
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 157/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMS +KQ+R+L +PE+
Sbjct: 374 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSAQKQQRMLNRQPEI 433
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 434 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 485
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTL+FSAT+ L ++ H K + ++ ++ L
Sbjct: 486 --SDSQYN---------PKRQTLIFSATLTLVHQAPARILHK--KHVKKIDKTAKLDLLV 532
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 533 QKIGMRGKPKVIDLTRNEATVESLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSIS 591
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 592 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 626
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 188 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 247
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 248 PMIHAVLQ 255
>gi|296215803|ref|XP_002754286.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 1 [Callithrix
jacchus]
Length = 856
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 160/284 (56%), Gaps = 23/284 (8%)
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
L+DK + Y PK L L++TPTRELALQV H+ VA+ ++ +VGGMST+KQ+
Sbjct: 371 LDDKSATCKAY-PKRPLLGLVLTPTRELALQVKQHIDAVARFTGIKTAILVGGMSTQKQQ 429
Query: 309 RLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDM 368
R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++M
Sbjct: 430 RMLNRYPEIVIATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEM 489
Query: 369 LPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVN 428
L N Q KRQTLVFSAT+ L ++ H K + ++
Sbjct: 490 L------NDSQYN-------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMD 528
Query: 429 GLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
++ L + G+R ++DLT L E+ I C+ ++KD YLYY L + GR
Sbjct: 529 KTAKLDLLMHKIGIRGKPKVIDLTRNEATVETLTETKIHCETDEKDLYLYYFL-MQYPGR 587
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 588 SLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 631
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLLE-EREKAA 246
P++ +L+ + KAA
Sbjct: 249 PMIHAVLQWHKRKAA 263
>gi|348553728|ref|XP_003462678.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Cavia porcellus]
Length = 841
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 22/272 (8%)
Query: 261 PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L PE+V+
Sbjct: 368 PKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRHPEIVIA 427
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N Q
Sbjct: 428 TPGRLWELVKEKHSHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML------NDSQ- 480
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA 440
KRQTLVFSAT+ L +L H K + ++ ++ L ++
Sbjct: 481 ------------YNPKRQTLVFSATLTLVHQVPARLLHK--KHVKKIDKTAKLDLLMQKI 526
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
GMR ++DLT L E+ I C+ E+KD YLYY L + GR++VF SI+ ++
Sbjct: 527 GMRGKPKVIDLTRNEGTVETLTETKIHCETEEKDFYLYYFL-MQYPGRSLVFANSISCIK 585
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 586 RLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 617
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 189 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLVPAIRDRLDILGAAETGSGKTLAFAI 248
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 249 PMIHAVLQ 256
>gi|444320517|ref|XP_004180915.1| hypothetical protein TBLA_0E03420 [Tetrapisispora blattae CBS 6284]
gi|387513958|emb|CCH61396.1| hypothetical protein TBLA_0E03420 [Tetrapisispora blattae CBS 6284]
Length = 742
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 205/372 (55%), Gaps = 50/372 (13%)
Query: 170 ISTEFDAW-NE---LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
I +E W NE L H L +++ RL F++PT IQK IP +G D++G A TGSG
Sbjct: 168 IPSELPHWCNEIPDLSFHTL--ETLSRLGFQKPTEIQKKSIPIVM-KGTDILGKASTGSG 224
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KTLA+G+PI++++L K ++ E G +I TPTRELA QV HL
Sbjct: 225 KTLAYGIPIIEKILSNL-KEGQLNETSG--------------IIFTPTRELAQQVGRHLN 269
Query: 286 GVAKGINVR---VVPIVGGMSTEKQERLL---KARPEVVVGTPGRLWELMSGGEKHLVEL 339
G + ++ I GG+S +KQER+L K +++V TPGR E++ EK+L
Sbjct: 270 EFVWGDHFNSSSIITITGGLSLQKQERILGYGKGAGQIIVSTPGRFLEIIEKDEKYLERF 329
Query: 340 HTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQT 399
+ VLDEADR+I++GHF E + I+ +L SNK + + Q QT
Sbjct: 330 SKIDILVLDEADRLIQDGHFEEFERILKLL-----SNKRRELKEQGY----------WQT 374
Query: 400 LVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIE----TLSERAGMRANVAIVDLTNMC 455
LV+SAT +L +KL G+ +K+ +N ++ L E+ R +VD+
Sbjct: 375 LVYSATFSLG--LFEKLDKGNKWNKKKLNQEEELDEVVNKLMEKIHFRQKPLVVDIDPFE 432
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+ ++ E+ IEC ++D Y+YY L ++G G TIVFC S+ +++ + LLK+L I+ +
Sbjct: 433 QMNKQIHETLIECGAMERDLYVYYFLIMYG-GSTIVFCNSVNSVKRLHDLLKLLKINSFK 491
Query: 516 LHAQMQQRARLK 527
L++ M Q++RLK
Sbjct: 492 LNSNMVQKSRLK 503
>gi|400598353|gb|EJP66070.1| ATP-dependent RNA helicase MAK5 [Beauveria bassiana ARSEF 2860]
Length = 799
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 196/361 (54%), Gaps = 17/361 (4%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P + +I +L F PT IQ+ IP G DVIG A+TGSGKTLAFG+PI++
Sbjct: 191 WVALNLSPATVSAIGKLGFASPTEIQEQTIPHITG-GADVIGKAQTGSGKTLAFGIPIVE 249
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
R LE + + E + E ++ KG + A+I++PTRELA Q+ DH+K + G+
Sbjct: 250 RWLELHQSTDEEDEAEAEAKKER--KGPI-AVILSPTRELAKQIGDHIKALCDGLPTAAA 306
Query: 297 PIV----GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
P V GG+S +KQ+R L A+ ++V+GTPGRLWE++ G K E + F V+DEADR
Sbjct: 307 PYVCVVTGGLSIQKQQRQL-AKADIVIGTPGRLWEVLDGNMKLQDEFCRIQFLVVDEADR 365
Query: 353 MIENGHFRELQSIIDML----PMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIA 407
+ + G F+E + II L P + + ++ + + RQTLVFSAT
Sbjct: 366 LFKAGQFKEAELIIGALDRRDPEAEDDSSDDEDFSEEEDEDADARHPPPRQTLVFSAT-- 423
Query: 408 LSADFRKKLKHGSLKS-KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
+ KL + S Q + L + R +D + +A L E I
Sbjct: 424 FDKGLQTKLAGKTRPSASQGATDEEKMAYLMQCLKFRGQPKFIDANPVEQMAEGLREGLI 483
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
EC +KD YLY +L ++ RT+VF SI+A+R ++ L+ L + LH+QM Q+ARL
Sbjct: 484 ECGAMEKDLYLYSVLLLNPGRRTLVFANSISAVRRVAPFLQNLNVPAQPLHSQMAQKARL 543
Query: 527 K 527
+
Sbjct: 544 R 544
>gi|19112899|ref|NP_596107.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582436|sp|O74393.1|MAK5_SCHPO RecName: Full=ATP-dependent RNA helicase mak5
gi|3560140|emb|CAA20727.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe]
Length = 648
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 213/421 (50%), Gaps = 57/421 (13%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEIST---EFDAWNELRLHP 184
K + KKKK K+ I+ V++ + L E E ++ + AW L P
Sbjct: 72 KEASEKKKKGKRTSPTIEMTSLGSKVTSKNYNEFSTLEEEDEHNSHGVDVSAWAHFSLSP 131
Query: 185 LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK 244
++ S+ + F +P PIQ IP A+ G D+IG A+TGSGKTLAFG+PI++ L R
Sbjct: 132 EMLGSLSKAGFSKPMPIQSLVIPEAS-IGFDIIGKADTGSGKTLAFGIPILEHCL--RNV 188
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMST 304
AK +++AL++ PTRELA Q+ H + + N+RV+ I GG++
Sbjct: 189 DAK----------------YVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAV 232
Query: 305 EKQERLLKARPEVVVGTPGRLWELMSGGEKHLV-ELHTLSFFVLDEADRMIENGHFRELQ 363
+KQ+RLL P VVV TPGRLW +++ E +L + VLDEADR+++ HF EL
Sbjct: 233 QKQQRLLNKHPHVVVATPGRLWSVIN--ENNLTGNFKKIKCLVLDEADRLLQKSHFEELS 290
Query: 364 SIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSL 421
++++L G TQ RQT +FSAT L +K +K G++
Sbjct: 291 KLLEIL--------GNPMHTQ------------RQTFIFSATFDEGLQQRLKKNMK-GNI 329
Query: 422 KSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL 481
K + + +E + + +D +A+++ E IEC +KD YLYY++
Sbjct: 330 TEKYN----SPMENMLKEVRFFGKPKFLDANPQSAVASRVLEGLIECAPAEKDLYLYYLI 385
Query: 482 SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIRKRPK 541
+ G+T+VF I ++ I+ L L + + LHAQ+ Q+ RL Q + + PK
Sbjct: 386 -MRYPGKTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRL----QSLEKFKNNPK 440
Query: 542 G 542
G
Sbjct: 441 G 441
>gi|291001145|ref|XP_002683139.1| predicted protein [Naegleria gruberi]
gi|284096768|gb|EFC50395.1| predicted protein [Naegleria gruberi]
Length = 460
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 196/354 (55%), Gaps = 49/354 (13%)
Query: 190 IYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE-KAAKM 248
+YRL F +PTPIQ+ IP A Q D++ AAETGSGKTLAF LPI+ L++ +E + A+
Sbjct: 1 LYRLGFYKPTPIQEESIPKAIGQQADILAAAETGSGKTLAFVLPIIDELMKLKENEPAQQ 60
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
++D + + LR+LI+ PTRELALQV H++ V + +++VV +VGG++ EKQ
Sbjct: 61 VKDDESRTDMF----QLRSLILLPTRELALQVCSHIEAVIRNTSLKVVGLVGGLNEEKQI 116
Query: 309 RLLKA-RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 367
R + +P+++V TPGR W + G + L F V+DEADRM+ + HF ELQSI+
Sbjct: 117 REIHVQKPDIIVATPGRYWFYIDKGMFASNSILGLRFLVIDEADRMVADAHFFELQSILR 176
Query: 368 MLPMT----NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS 423
+ + N N+ + EQ + I D K K K+
Sbjct: 177 YITIERFKRNYINQKEEEQVE---------------------IPQEQDAEHKKKEKETKT 215
Query: 424 KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSV 483
++ + + +I + N +VDLT +LA+ L+E+FI+ EDK YLYY L++
Sbjct: 216 QKIIQKILAILDMK-------NPVMVDLTTSNLLAHTLQEAFIQSTREDKVLYLYYFLTI 268
Query: 484 HGQGRTIVFCTSIAALRHISSLLKIL----------GIDVWTLHAQMQQRARLK 527
+ GRT+VF +I +R I ++LK L I + +LH +M Q++R K
Sbjct: 269 YS-GRTVVFTNNIKVVRFIGNILKELFNKGPNAKQTSITIVSLHGKMDQQSRFK 321
>gi|351698834|gb|EHB01753.1| ATP-dependent RNA helicase DDX24 [Heterocephalus glaber]
Length = 989
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 157/275 (57%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L PE+
Sbjct: 381 KTHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRHPEI 440
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
V+ TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 441 VIATPGRLWELVKEKHSHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 492
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTLVFSAT+ L +L H K + ++ ++ L
Sbjct: 493 --SDSQYN---------PKRQTLVFSATLTLVHQAPARLLHK--KHVKKMDKTAKLDLLM 539
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR++VF SI+
Sbjct: 540 QKIGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYFL-MQYPGRSLVFANSIS 598
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 599 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 633
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLVPAIRDRLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLEEREK 244
P++ +L+ ++K
Sbjct: 250 PMIHAVLQWQKK 261
>gi|9931363|gb|AAG02170.1|AF214732_1 ATP-dependent RNA helicase [Mus musculus]
Length = 857
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRERGTVETLTETKIHCETDEKDLYLYYF 582
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GR++VF SI+ ++ +S LLK+L + TLHA M Q+ RL+ Q
Sbjct: 583 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQF 633
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|34328253|ref|NP_065240.2| ATP-dependent RNA helicase DDX24 isoform 2 [Mus musculus]
gi|341940454|sp|Q9ESV0.2|DDX24_MOUSE RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|32967660|gb|AAH55048.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|33244019|gb|AAH55317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|148686888|gb|EDL18835.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Mus
musculus]
Length = 857
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYF 582
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GR++VF SI+ ++ +S LLK+L + TLHA M Q+ RL+ Q
Sbjct: 583 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQF 633
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|347831310|emb|CCD47007.1| hypothetical protein [Botryotinia fuckeliana]
Length = 774
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 168/538 (31%), Positives = 268/538 (49%), Gaps = 85/538 (15%)
Query: 33 LDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKLNS 92
+DSL WN E P F E GF LEE+D+ G ++S
Sbjct: 43 VDSLPWN-----EVTMPDMF-----EDAEGFYGLEEVDDVEV------VRDGDVVTFVSS 86
Query: 93 KKRKRSSANEEDSGDGDGDGDEDGSGVQ---KQEEKNLKNETGKKKKKK----------- 138
K + + +EE G GD + DE S V+ E++++++T + +K+
Sbjct: 87 KIQPKKDDDEEFEGFGDDNEDEKTSEVKPILTPTEESVEDKTPEGQKENIEKKPKPEKKQ 146
Query: 139 --------KKGKKIKT---------------VEESVAVSNGP-DDAEEELVNEAEISTEF 174
+ +KI +++ + P + + L +A +
Sbjct: 147 KKDKPDTKDQEEKIPNKKEKKQKKEKAQQQPIDKDAGLKQDPLKNVFQALEEDAAKEVDV 206
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+W EL L + ++ ++ F +PTPIQ IP G DV+G A TGSGKTLAFG+PI
Sbjct: 207 SSWEELDLSSNTLSALSKMGFSKPTPIQSEAIPEVL-AGHDVVGKASTGSGKTLAFGIPI 265
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR 294
+++ LE + D+ E + P ALI++PTRELA Q+T+H+ + KG+
Sbjct: 266 VEKWLEAYGEL-----DEDELKKNTRPP---TALILSPTRELAHQLTEHITALCKGMPTS 317
Query: 295 --VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
V + GG+S +KQ+R L A+ ++++GTPGRLWE++S + L + F V+DEADR
Sbjct: 318 PWVAAVTGGLSVQKQQRQL-AKADIIIGTPGRLWEVISSSNELSASLKQVRFLVIDEADR 376
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ +GHF+E + I++ L T+G + RQTLVFSAT F
Sbjct: 377 LLTDGHFKEAEEILNALDRTHGDED----------DEEEDELPPRQTLVFSAT------F 420
Query: 413 RKKLKHG-SLKSKQSV-NGLNSIETLSERAGMRAN-VAIVDLTNMCVLANKLEESFIECK 469
K L+ + K KQS + S+E L ++ R VD+ + +A L+E +EC
Sbjct: 421 HKGLQQKLAGKGKQSFKDESQSMEYLLKKLNFREEKPKFVDVNPISQMAANLKEGMVECG 480
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+KD YLY +L H RT++F SI ++R ++ +L+ L I +LH+QM Q+AR++
Sbjct: 481 GEEKDLYLYSLLLHHPNQRTLIFTNSIHSVRRLTPMLQTLNIPAHSLHSQMIQKARMR 538
>gi|226958385|ref|NP_001152974.1| ATP-dependent RNA helicase DDX24 isoform 1 [Mus musculus]
Length = 903
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 410 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 469
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 470 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 529
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 530 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 569
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 570 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYF 628
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GR++VF SI+ ++ +S LLK+L + TLHA M Q+ RL+ Q
Sbjct: 629 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQF 679
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 237 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 296
Query: 233 PIMQRLLE-EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
P++ +L+ + KA + G P RE+ T HL K
Sbjct: 297 PMIHSVLQWHKMKAPPIPRSTG-----------------MPPREMRFGATAHLGSPCK 337
>gi|320592957|gb|EFX05366.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 855
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 208/385 (54%), Gaps = 27/385 (7%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW L + P L+ + RL+F +P+ IQ A IP G DVIG A TGSGKTLAF +PI+
Sbjct: 187 AWVPLDIVPPLLSCLARLKFSKPSAIQAATIPEIL-AGHDVIGKASTGSGKTLAFAIPIV 245
Query: 236 QRLLEE--REKAAKMLEDKGEE-----AEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
QR L E E+ K E G++ K P AL+++PT ELA Q+T H+K +
Sbjct: 246 QRWLAEGGAERRQKKTEADGDKDADGDTPKKRPVCRPTALVLSPTGELAHQITTHIKELC 305
Query: 289 KGINVR--VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
+ V + GG+S KQ+R L+ + ++VVGTPGRLWE++S + L ++ F V
Sbjct: 306 AALPSYPYVCAVTGGLSVFKQQRQLE-KADIVVGTPGRLWEVLSTSKPLLEAFRSIDFLV 364
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTN---GSNKGQSEQTQNCVTVS-SLQRKKRQTLVF 402
+DEADR++ +GHF+E + I++ L T G KG+ E + K RQTLVF
Sbjct: 365 VDEADRLLSDGHFKEAEEILEALDRTEVDEGEGKGEDEAEDENEAELETPPPKPRQTLVF 424
Query: 403 SATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
SAT L K ++ + KQS++ L E + +D+ + +A +
Sbjct: 425 SATFNRGLQQKLAGKSRYDLMDQKQSMDHLMKRLNFREESPQ-----FIDVNPVSQMAER 479
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
L E +EC +KD YLY +L + RT+VF SI+ +R ++ LL+ L + LH+QM
Sbjct: 480 LREGMVECGAMEKDLYLYSLLLLQPTRRTLVFANSISTVRRLAPLLQNLNLPAIALHSQM 539
Query: 521 QQRARLKLFSQMITWIRKRPKGDRG 545
Q+ARL+ + K +G RG
Sbjct: 540 PQKARLRAVERF-----KAAQGSRG 559
>gi|402591039|gb|EJW84969.1| DEAD/DEAH box helicase [Wuchereria bancrofti]
Length = 485
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 193/357 (54%), Gaps = 41/357 (11%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L + ++K++ + F EPT IQK IP+A D+IGAAETGSGKTLAFG+P+++
Sbjct: 4 WINLYISDAVLKAVADMGFTEPTEIQKLVIPSAVRDRFDIIGAAETGSGKTLAFGVPVVE 63
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL + LE G++ KG +RALI+ PTREL +Q+ +H+ + K +V
Sbjct: 64 HLLANQS----FLESSGQK------KG-IRALILAPTRELVMQIKNHIDALLKYTPFKVA 112
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH--LVELHTLSFFVLDEADRMI 354
+VGG+S +KQER+LK PE+V+ TPGRL LM E L + L V+DE DRMI
Sbjct: 113 SVVGGLSLQKQERILKYVPEIVIATPGRLLALMRSAEADSCLSDWSHLQCLVVDETDRMI 172
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E GHF +LQ I+D L K S KK QT VFSAT+ + K
Sbjct: 173 EKGHFEDLQHILDTL------RKNTS--------------KKLQTFVFSATLTYTHPVPK 212
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKE-ED 472
K + G K + I L E G+R I+D+T A + E+ I C +
Sbjct: 213 K-RGGVNADKMDTD--EKISRLIEITGIRKEKHRIIDITGEKGTARTVVEARINCNNLLE 269
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID--VWTLHAQMQQRARLK 527
KD L Y+LS +G GRT+VF S+ A R + +L+ L LHA+M Q+ RLK
Sbjct: 270 KDTNLIYLLSRYG-GRTLVFTNSVDASRRLHGILEKLEHKPVPLMLHAKMMQKKRLK 325
>gi|33150748|gb|AAP97252.1|AF134475_1 ATP-dependent RNA helicase [Homo sapiens]
Length = 486
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L ++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L RPE+
Sbjct: 8 KAYPKRPLLGRVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 67
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N S
Sbjct: 68 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEML---NDSQY 124
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 125 N----------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLM 166
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR++VF SI+
Sbjct: 167 QKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGRSLVFANSIS 225
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 226 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 260
>gi|148686887|gb|EDL18834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Mus
musculus]
Length = 943
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 450 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 509
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 510 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 569
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 570 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 609
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 610 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYF 668
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GR++VF SI+ ++ +S LLK+L + TLHA M Q+ RL+ Q
Sbjct: 669 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQF 719
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 277 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 336
Query: 233 PIMQRLLE-EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
P++ +L+ + KA + G P RE+ T HL K
Sbjct: 337 PMIHSVLQWHKMKAPPIPRSTG-----------------MPPREMRFGATAHLGSPCK 377
>gi|388579536|gb|EIM19858.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 711
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 34/359 (9%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++S++ PTPIQK + A+ + KDVIG AETGSGKTLA+GLPI+ R++E
Sbjct: 152 LLRSLHENSIVTPTPIQKESLKASMIR-KDVIGIAETGSGKTLAYGLPILSRIVE----- 205
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN-----VRVVPIVG 300
GE P+ L AL++ PTRELALQV LK A + V V +VG
Sbjct: 206 -------GE-----IPEESLAALVLCPTRELALQVAGELKKFAPRVQDITRRVNVATVVG 253
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMS +KQ+R L+ +VV TPGRLWE++ F V+DEADRMIE GHF
Sbjct: 254 GMSIQKQKRQLQY-ANIVVATPGRLWEVLLDDGTLAKRAIRSQFLVIDEADRMIEAGHFE 312
Query: 361 ELQSIIDMLPMTNGSN----KGQSEQTQNCVTVSSLQRKKRQTLVFSATIA--LSADFRK 414
E+ I+ M T+ S+ + + E T+ + QT+VFSAT++ L + ++
Sbjct: 313 EMDKILRMTQRTSKSSTAAFQDEFESTEIGLPEEVPATDDMQTMVFSATLSKDLQQNLKR 372
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDK 473
K K GS K KQ V +S++ L R R +I+DL+ + + + LEE+ ++C DK
Sbjct: 373 KRKAGSGKKKQEVK--SSLDDLLMRLDFRDLEPSIIDLSPVNKVVSTLEEARVDCLSTDK 430
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
D Y Y + G+T+VF +SI A+R + LL+ L V+ LH+ +QQR RL+ F +
Sbjct: 431 DLY-LYYFLLRYPGKTLVFVSSIDAIRRMIPLLETLKQHVFPLHSGLQQRQRLRNFDRF 488
>gi|342320500|gb|EGU12440.1| ATP-dependent RNA helicase MAK5 [Rhodotorula glutinis ATCC 204091]
Length = 871
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 224/437 (51%), Gaps = 61/437 (13%)
Query: 154 SNGPDDAEEELVNEA--EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACI----- 206
SNG A EE +E ++ E AW+ + L L +++ L+F +PT IQ+ +
Sbjct: 199 SNG--GAVEEAADEPPFDVEAELPAWSHIPLANPLYRALAELKFTKPTEIQEKALLVGED 256
Query: 207 -----------------PAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKML 249
A A + DV+G A+TGSGKTLA+GLPI+ +L + ++
Sbjct: 257 AKAQAEGEEEQEKSAFDTAPAGREHDVVGIAQTGSGKTLAYGLPILSHILSQPSPSSSPS 316
Query: 250 EDKGEEAEKYAPKGHLRALIITPTRELALQV-----------------TDHLKGVA---- 288
+ + E P L ALI+ PTRELALQV + + VA
Sbjct: 317 DSDSDADEPSLPSTRLAALILCPTRELALQVRTSLSSLSVRSLPLRTPSPETEKVAPEDP 376
Query: 289 ----KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
+G V+VV + GGMS EKQ+R L+ ++VV TPGRLW+L+ + + E+ + F
Sbjct: 377 RKRKQGRLVQVVALTGGMSVEKQKRQLERGADIVVATPGRLWDLIGESDMLVQEIKNIKF 436
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTNGS-NKGQSEQTQNCVT----VSSLQ-RKKRQ 398
V+DEADRMIENGHF EL+SI+ + + + G + + V V++L R +
Sbjct: 437 LVIDEADRMIENGHFAELESIVRLTRREQATPDDGFVDDFDSAVASRTNVTTLPCRPDMR 496
Query: 399 TLVFSATIALSADFRKKLKHGSLK-SKQSVNG-LNSIETLSERAGMR-ANVAIVDLTNMC 455
T VFSAT++ K K G K ++V G + S++ L E R + I+DL+
Sbjct: 497 TFVFSATMSKELQLNLKRKGGPKKFVPKAVEGEMTSLDDLLELLDFRDPDPEIIDLSPEH 556
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L L+E +EC +KD YLY+ L + GRTIVF +I +R + +L +L ++V
Sbjct: 557 GLVETLKECKVECLANEKDMYLYHFL-LRYPGRTIVFLAAIDGIRRLHPVLTLLKVNVIP 615
Query: 516 LHAQMQQRARLKLFSQM 532
LH+ MQQR RLK +
Sbjct: 616 LHSGMQQRQRLKALDKF 632
>gi|74147720|dbj|BAE38731.1| unnamed protein product [Mus musculus]
Length = 792
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 165/292 (56%), Gaps = 24/292 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 365 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 424
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 425 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 484
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 485 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 524
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 525 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYF 583
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GR++VF SI+ ++ +S LLK+L + TLHA M Q+ RL+ Q
Sbjct: 584 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQF 634
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|68482156|ref|XP_714962.1| hypothetical protein CaO19.11024 [Candida albicans SC5314]
gi|68482283|ref|XP_714899.1| hypothetical protein CaO19.3540 [Candida albicans SC5314]
gi|74656286|sp|Q59ZH9.1|MAK5_CANAL RecName: Full=ATP-dependent RNA helicase MAK5
gi|46436498|gb|EAK95859.1| hypothetical protein CaO19.3540 [Candida albicans SC5314]
gi|46436563|gb|EAK95923.1| hypothetical protein CaO19.11024 [Candida albicans SC5314]
Length = 782
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 214/382 (56%), Gaps = 39/382 (10%)
Query: 157 PDDAEEELVN--EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
PDD E L N E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 185 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 235
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
DVIG A TGSGKTLA+G+PI+++ ++ + +++ ++ + P G +I PTR
Sbjct: 236 DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDKKINHPTG----IIFAPTR 287
Query: 275 ELALQVTDHLKGVAK--GINVR-VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
ELA QV DHL +AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+ G
Sbjct: 288 ELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQG 347
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
+ L ++ VLDEADR++++GHF E + I+++ G N+ +S+ +
Sbjct: 348 DSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIE------- 396
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVD 450
K QTLVFSAT + FRK +H KS + ++ L+E+ + +VD
Sbjct: 397 ---WKWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLVD 452
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
+++ ++ E+ +EC ++D YLYY + +G T+VF SI +++ + LL L
Sbjct: 453 ANPKEIVSGQITEALVECGPTERDLYLYY-FLLMYKGSTLVFANSIDSVKRLVPLLNNLN 511
Query: 511 IDVWTLHAQMQQRARLKLFSQM 532
I +++H+ M Q+ RL+ +
Sbjct: 512 IPAFSIHSSMIQKQRLRALEKF 533
>gi|354489656|ref|XP_003506977.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
gi|344257276|gb|EGW13380.1| ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
Length = 853
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 155/272 (56%), Gaps = 22/272 (8%)
Query: 261 PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
P+ L L++TPTRELA+QV H+ VAK ++ +VGGMST+KQ+R+L PE+V+
Sbjct: 379 PRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGIKTAILVGGMSTQKQQRMLNRHPEIVIA 438
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML S
Sbjct: 439 TPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML--------NDS 490
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA 440
+ N RQTLVFSAT+ L ++ H K + ++ ++ L ++
Sbjct: 491 QYNPN-----------RQTLVFSATLTLVHQVPARILHK--KHVKKMDKTTKLDLLMQKI 537
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
GMR ++DLT L E+ I C+ ++KD YLYY L + GR++VF SI+ ++
Sbjct: 538 GMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDWYLYYFL-MQYPGRSLVFANSISCIK 596
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 597 RLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 628
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 153 VSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
VS P A+ + + + AW +L + +++++ L F PTPIQ +P A
Sbjct: 173 VSKVPKKAKTWMPEVQDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLPPAIRD 232
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLE 240
D++GAAETGSGKTLAF +P++ +L+
Sbjct: 233 KLDILGAAETGSGKTLAFAIPMIHAVLQ 260
>gi|33150792|gb|AAP97274.1|AF145022_1 ATP-dependent RNA helicase [Homo sapiens]
Length = 454
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L ++TPTRELA+QV H+ VA+ ++ +VGGMST+KQ+R+L RPE+
Sbjct: 8 KAYPKRPLLGRVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEI 67
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML N S
Sbjct: 68 VVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEML---NDSQY 124
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
KRQTLVFSAT+ L ++ H K + ++ ++ L
Sbjct: 125 N----------------PKRQTLVFSATLTLVHQAPARILHK--KHTKKMDKTAKLDLLM 166
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GR++VF SI+
Sbjct: 167 QKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFL-MQYPGRSLVFANSIS 225
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 226 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 260
>gi|74178110|dbj|BAE29843.1| unnamed protein product [Mus musculus]
gi|74220253|dbj|BAE31305.1| unnamed protein product [Mus musculus]
gi|74225346|dbj|BAE31603.1| unnamed protein product [Mus musculus]
Length = 857
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 164/292 (56%), Gaps = 24/292 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+D ADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDGADRMVEKGHFA 483
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYF 582
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + GR++VF SI+ ++ +S LLK+L + TLHA M Q+ RL+ Q
Sbjct: 583 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQF 633
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPEAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|238882283|gb|EEQ45921.1| hypothetical protein CAWG_04261 [Candida albicans WO-1]
Length = 768
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 213/382 (55%), Gaps = 39/382 (10%)
Query: 157 PDDAEEELVN--EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
PDD E L N E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 171 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLDFKKPTPIQKETIPIAL-SGK 221
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
DVIG A TGSGKTLA+G+PI+++ ++ + +++ ++ + P G +I PTR
Sbjct: 222 DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDKKINHPTG----IIFAPTR 273
Query: 275 ELALQVTDHLKGVAK--GINVR-VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
ELA QV DHL +AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+ G
Sbjct: 274 ELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQG 333
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
+ L + VLDEADR++++GHF E + I+++ G N+ +S+ +
Sbjct: 334 DSELAKRLASTDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPKSKSIE------- 382
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVD 450
K QTLVFSAT + FRK +H KS + ++ L+E+ + +VD
Sbjct: 383 ---WKWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLVD 438
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
+++ ++ E+ +EC ++D YLYY + +G T+VF SI +++ + LL L
Sbjct: 439 ANPKEIVSGQITEALVECGPTERDLYLYY-FLLMYKGSTLVFTNSIDSVKRLVPLLNNLN 497
Query: 511 IDVWTLHAQMQQRARLKLFSQM 532
I +++H+ M Q+ RL+ +
Sbjct: 498 IPAFSIHSSMIQKQRLRALEKF 519
>gi|432850192|ref|XP_004066748.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Oryzias latipes]
Length = 820
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 158/263 (60%), Gaps = 24/263 (9%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
L +++TPTRELA+QV H+ V K +++ +VGGM+ +KQ+R+LK PE+++ TPGR
Sbjct: 351 LLGMVLTPTRELAVQVKHHIDAVTKFTDIKTAILVGGMAQQKQKRMLKRCPEIIIATPGR 410
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LW+L+ HL+ L L V+DEADRM+E GHF EL+S+++ML T+ +
Sbjct: 411 LWDLIKEKHPHLLNLRHLRCLVIDEADRMVERGHFAELESLLEMLNTTHFN--------- 461
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRA 444
KRQT VFSAT+ L+ +L L+ K+++ + ++ L E+ G+++
Sbjct: 462 ----------PKRQTFVFSATLTLTHSLPSRL----LQKKKNLEKRSKLDILIEKVGIKS 507
Query: 445 NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
++DLT L E+ I C++++KD YLYY L + GRT+VF SI ++ ++S
Sbjct: 508 KPKVIDLTRKEATVETLTETQIHCQKDEKDFYLYYFL-LQYPGRTMVFANSIDCIKRLNS 566
Query: 505 LLKILGIDVWTLHAQMQQRARLK 527
LL IL + LHA M Q+ RLK
Sbjct: 567 LLVILECNPLPLHANMHQKQRLK 589
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 125 KNLKNETGKK-KKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLH 183
KN + ET + +++ + G KT + A G DD ++ ++ AW +L +
Sbjct: 150 KNKEKETEESFRERSRHGGAAKTKNWTSAALCGSDDDKQ---------SDVSAWKDLFVP 200
Query: 184 PLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE 243
++K++ L F+ PTPIQ +P A DV+GAAETGSGKTLAFG+P++ +LE +
Sbjct: 201 SSVLKALSSLGFESPTPIQALALPPAIRDHMDVLGAAETGSGKTLAFGIPMIHAILEWKR 260
Query: 244 KAAKMLED 251
+ L D
Sbjct: 261 GTEQSLHD 268
>gi|207347639|gb|EDZ73745.1| YBR142Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|290878158|emb|CBK39217.1| Mak5p [Saccharomyces cerevisiae EC1118]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 210/400 (52%), Gaps = 50/400 (12%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA----------WNELR-LHPLLMKSIYRLQFKE 197
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 198 PTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAE 257
PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK---------- 238
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLKA 313
P +LI TPTRELA QVTDHLK + + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 314 RP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-- 429
N+ SE + K QTL+FSAT ++ F K +K ++ N
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSRQVKDRRFKNNED 401
Query: 430 -LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
LN+ I+ L + + I+D ++++++ES IEC ++D Y YY L++ G
Sbjct: 402 ELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP-G 460
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 461 TTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 500
>gi|190408703|gb|EDV11968.1| ATP-dependent RNA helicase MAK5 [Saccharomyces cerevisiae RM11-1a]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 210/400 (52%), Gaps = 50/400 (12%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA----------WNELR-LHPLLMKSIYRLQFKE 197
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 198 PTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAE 257
PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK---------- 238
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLKA 313
P +LI TPTRELA QVTDHLK + + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 314 RP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-- 429
N+ SE + K QTL+FSAT ++ F K +K ++ N
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSRQVKDRRFKNNED 401
Query: 430 -LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
LN+ I+ L + + I+D ++++++ES IEC ++D Y YY L++ G
Sbjct: 402 ELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP-G 460
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 461 TTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 500
>gi|346327471|gb|EGX97067.1| ATP dependent RNA helicase, putative [Cordyceps militaris CM01]
Length = 852
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 217/434 (50%), Gaps = 49/434 (11%)
Query: 124 EKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLH 183
++ L+ KK+K G ++ + + + DD NEA + + W L L
Sbjct: 191 DRKLEAAAADTIKKQKGGAQVNPFD---VLMDAQDDE-----NEANL----EDWVALNLS 238
Query: 184 PLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE 243
P ++ +I +L F PT IQ IP + G DVIG A+TGSGKTLAFG+PI++R LE
Sbjct: 239 PAIVSAIGKLGFTSPTAIQAESIPPI-NAGADVIGKAQTGSGKTLAFGIPIVERWLELHA 297
Query: 244 KAAKMLEDKGEEAEKYAPKGHLR----ALIITPTRELALQVTDHLKGVAKGI---NVRVV 296
++ G+E E R A+I++PTRELA Q+ DHL+ + G+ + RV
Sbjct: 298 DKDGTDDEDGDEEEAEQDGASSRKGPTAVILSPTRELAKQIGDHLRALCAGLPAASPRVC 357
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT-LSFFVLDEADRMIE 355
+ GG+S KQ+R L+ +VVVGTPGRLWE++ G + L F V+DEADR+ +
Sbjct: 358 VVTGGLSVHKQQRQLRT-ADVVVGTPGRLWEVLDGDAALQAAFRSRLRFLVVDEADRLFK 416
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G F+E + II L G ++ E+ + V RQTLVFSAT D + K
Sbjct: 417 VGQFKEAELIIGALDRRAGGSESDDEEDEEEVDEGDEGSWSRQTLVFSAT--FDKDLQMK 474
Query: 416 LKHGSLKSKQSVNGLNS--IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
L K + S G + + L R +D+ + +A L E IEC +K
Sbjct: 475 LAG---KKRPSAQGTDEEKMADLMRCLKFRGQPTFIDVNPVSQMAEGLREGLIECGAMEK 531
Query: 474 --------------------DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
D YLY +L ++ RT+VF SIAA+R ++ L+ L I
Sbjct: 532 VSPSQNCAPIASSSILTLLQDLYLYSVLLLNPGRRTLVFANSIAAVRRVAPFLQNLNITA 591
Query: 514 WTLHAQMQQRARLK 527
LH+QM Q+ARL+
Sbjct: 592 QPLHSQMAQKARLR 605
>gi|256268948|gb|EEU04293.1| Mak5p [Saccharomyces cerevisiae JAY291]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 211/401 (52%), Gaps = 52/401 (12%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA----------WNELR-LHPLLMKSIYRLQFKE 197
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 198 PTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE-REKAAKMLEDKGEEA 256
PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ +K K +
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNKKPI------- 241
Query: 257 EKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLK 312
+LI TPTRELA QVTDHLK + + + ++ + GG+S +KQ+RLLK
Sbjct: 242 ----------SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 313 ARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 370
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 371 MTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG- 429
+ N+ SE + K QTL+FSAT ++ F K +K ++ N
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSRQVKDRRFKNNE 400
Query: 430 --LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ 486
LN+ I+ L + + I+D ++++++ES IEC ++D Y YY L++
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP- 459
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
G T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 460 GTTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 500
>gi|160409988|sp|A6ZL85.1|MAK5_YEAS7 RecName: Full=ATP-dependent RNA helicase MAK5; AltName:
Full=Maintenance of killer protein 5
gi|151946532|gb|EDN64754.1| maintenance of killer [Saccharomyces cerevisiae YJM789]
Length = 769
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 211/401 (52%), Gaps = 52/401 (12%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA----------WNELR-LHPLLMKSIYRLQFKE 197
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 198 PTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE-REKAAKMLEDKGEEA 256
PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ +K K +
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNKKPI------- 241
Query: 257 EKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLK 312
+LI TPTRELA QVTDHLK + + + ++ + GG+S +KQ+RLLK
Sbjct: 242 ----------SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLK 291
Query: 313 ARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 370
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L
Sbjct: 292 YDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLL 351
Query: 371 MTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG- 429
+ N+ SE + K QTL+FSAT ++ F K +K ++ N
Sbjct: 352 VERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSRQVKDRRFKNNE 400
Query: 430 --LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ 486
LN+ I+ L + + I+D ++++++ES IEC ++D Y YY L++
Sbjct: 401 DELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP- 459
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
G T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 460 GTTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 500
>gi|224099995|ref|XP_002311702.1| predicted protein [Populus trichocarpa]
gi|222851522|gb|EEE89069.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/137 (74%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSV-NGLNSIETLSERAGMRANVAIVD 450
+QRKKRQT VFSAT ALSADFRKKLK GSLKSKQS +GLNSIE LSERAGM N AI+D
Sbjct: 1 MQRKKRQTSVFSATKALSADFRKKLKRGSLKSKQSTADGLNSIEMLSERAGMSVNSAIID 60
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
LTN+ ++ANKLEESF+ ++ K YYIL+VHGQGRTIV CTSIAALRHIS+LL+IL
Sbjct: 61 LTNVSIVANKLEESFLNVGKKIK-MLTYYILTVHGQGRTIVVCTSIAALRHISALLRILS 119
Query: 511 IDVWTLHAQMQQRARLK 527
I VW LH QMQQRARLK
Sbjct: 120 IHVWKLHVQMQQRARLK 136
>gi|149248082|ref|XP_001528428.1| hypothetical protein LELG_00948 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032565|sp|A5DUB2.1|MAK5_LODEL RecName: Full=ATP-dependent RNA helicase MAK5
gi|146448382|gb|EDK42770.1| hypothetical protein LELG_00948 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 855
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 174/572 (30%), Positives = 278/572 (48%), Gaps = 97/572 (16%)
Query: 14 KKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEAS 73
K+ P +++ +K + K++ L W E D F GGF LEEID
Sbjct: 33 KRNTPTLKQKLKKESKIVKINELAWK---PVEIPDNFGDF-------GGFYGLEEIDGVD 82
Query: 74 YNLQIPKPE---KGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNE 130
+ KP+ KG+ G+K S + ++ NE + GD D + DE G + +QE++N N+
Sbjct: 83 VEMVDGKPQFVVKGEEGEK--SVSNENTTTNELEDGD-DIEVDE-GEEIAQQEQENSDND 138
Query: 131 --------------------------TG-----KKKKKKKKG--KKIKTVEESVAVS-NG 156
TG K++K G KK+ + E+ + N
Sbjct: 139 ELIEEDAEEVEEQQQHGEKELEEEEFTGFGDDIAKEEKDSDGAKKKLNSSEDIDELKYNA 198
Query: 157 PDDAEEELVNEAEISTEFDAWNELR----LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
+ + L N+ EI + W E + L P ++ + ++F PTPIQK IP A +
Sbjct: 199 FANLDLPLPNDDEI--DLPEWGEDKIETCLSPYILNGLSNMKFTTPTPIQKRTIPLAL-E 255
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
GKDVIG A TGSGKTLA+G+PI+++ ++ + + + +K H +I P
Sbjct: 256 GKDVIGKATTGSGKTLAYGIPILEKYIQSLDTVKRKVREK--------VVNHPTGIIFAP 307
Query: 273 TRELALQVTDHLKGVAKGINVR---VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
TRELA QV DHL +A+ + +V + GG+S +KQERLL P ++V TPGR+ EL
Sbjct: 308 TRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIVATPGRMLELC 367
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV 389
++ + L VLDEADR++++GHF E + I+++ N E
Sbjct: 368 QNDQELVKRLSMTDIIVLDEADRLLQDGHFEEFEKILELFNKNRPKNDKSIEW------- 420
Query: 390 SSLQRKKRQTLVFSATIA--LSADFRKKLKHGSLKSK-QSVNGLNS----------IETL 436
K QTLVFSAT + L K+ K S+K +++N +S IE L
Sbjct: 421 ------KWQTLVFSATFSRDLFGKLDKQQKQKSVKGNGKALNKADSGNSLVQNDEIIELL 474
Query: 437 SERAGMRANV-AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTS 495
E+ + ++VD +++ ++ E+ +EC ++D YLYY + +G T+VF S
Sbjct: 475 REKLRFKDKAPSLVDANPKEIVSGQITEALVECGPLERDLYLYY-FLLMYKGSTLVFANS 533
Query: 496 IAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
I +++ + LL L I + +H+ M Q+ RL+
Sbjct: 534 IDSVKRLVPLLNNLNIPAFAIHSSMIQKQRLR 565
>gi|323334595|gb|EGA75969.1| Mak5p [Saccharomyces cerevisiae AWRI796]
Length = 700
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 210/400 (52%), Gaps = 50/400 (12%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA----------WNELR-LHPLLMKSIYRLQFKE 197
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 198 PTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAE 257
PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ + K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSRKNK---------- 238
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLKA 313
P +LI TPTRELA QVTDHLK + + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 314 RP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-- 429
N+ SE + K QTL+FSAT ++ F K +K ++ N
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSRQVKDRRFKNNED 401
Query: 430 -LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
LN+ I+ L + + I+D ++++++ES IEC ++D Y YY L++ G
Sbjct: 402 ELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP-G 460
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 461 TTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 500
>gi|241951434|ref|XP_002418439.1| ATP-dependent RNA helicase, putative; maintenance of killer
protein, putative [Candida dubliniensis CD36]
gi|223641778|emb|CAX43740.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 758
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 213/382 (55%), Gaps = 39/382 (10%)
Query: 157 PDDAEEELVN--EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
PDD E L N E ++ + A+ + + +L FK+PTPIQK IP A GK
Sbjct: 161 PDDNEINLPNWQEGDLGSSISAYT--------LYGLSQLNFKKPTPIQKETIPIAL-SGK 211
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
DVIG A TGSGKTLA+G+PI+++ ++ + +++ ++ + P G +I PTR
Sbjct: 212 DVIGKATTGSGKTLAYGIPILEKYIQ----SLNLIKQNNKDNKINHPTG----IIFAPTR 263
Query: 275 ELALQVTDHLKGVAK--GINVR-VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
ELA QV DHL +AK ++ R +V I GG+S +KQ+RLL+ P ++V TPGR+ EL+ G
Sbjct: 264 ELAHQVVDHLNSLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELIQG 323
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
+ L + VLDEADR++++GHF E + I+++ G N+ +++ +
Sbjct: 324 DSELAKRLASTDIIVLDEADRLLQDGHFDEFEKILELF----GKNRPENKSIE------- 372
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-ANVAIVD 450
K QTLVFSAT + FRK +H KS + ++ L+E+ + ++D
Sbjct: 373 ---WKWQTLVFSATFSRDL-FRKLDRHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTLID 428
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
+++ ++ E+ +EC ++D YLYY + +G T+VF SI +++ + LL L
Sbjct: 429 ANPKEIVSGQITEALVECGPTERDLYLYY-FLLMYKGSTLVFANSIDSVKRLVPLLNNLN 487
Query: 511 IDVWTLHAQMQQRARLKLFSQM 532
I +++H+ M Q+ RL+ +
Sbjct: 488 IPAFSIHSSMIQKQRLRALEKF 509
>gi|365766859|gb|EHN08348.1| Mak5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 769
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 209/400 (52%), Gaps = 50/400 (12%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA----------WNELR-LHPLLMKSIYRLQFKE 197
ES +++ +D +E+++ E + + + W L L +++S+ L F
Sbjct: 130 ESSKLTDPSEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLR 189
Query: 198 PTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAE 257
PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ K
Sbjct: 190 PTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSXKNK---------- 238
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLKA 313
P +LI TPTRELA QVTDHLK + + + ++ + GG+S +KQ+RLLK
Sbjct: 239 --KP----ISLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKY 292
Query: 314 RP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
++V+ TPGR EL+ + + +LDEADR++++GHF E + II L +
Sbjct: 293 DNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLV 352
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG-- 429
N+ SE + K QTL+FSAT ++ F K +K ++ N
Sbjct: 353 ERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSRQVKDRRFKNNED 401
Query: 430 -LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
LN+ I+ L + + I+D ++++++ES IEC ++D Y YY L++ G
Sbjct: 402 ELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP-G 460
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 461 TTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 500
>gi|355683260|gb|AER97066.1| DEAD box polypeptide 24 [Mustela putorius furo]
Length = 702
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 154/275 (56%), Gaps = 22/275 (8%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VAK ++ +VGGMS +KQ+R+L +PE+
Sbjct: 241 KAHPKRPLLGLVLTPTRELAVQVKQHIDAVAKFTGIKTAILVGGMSAQKQQRMLNRQPEI 300
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
VV TPGRLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 301 VVATPGRLWELIKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 352
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQTL+FSAT+ L ++ H K ++ L
Sbjct: 353 --SDSQYN---------PKRQTLIFSATLTLVHQAPARILHKKHIKKIDKTA--KLDLLV 399
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 400 QKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSIS 458
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 459 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 493
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 54 DVTAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 113
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 114 PMIHAVLQ 121
>gi|326432948|gb|EGD78518.1| hypothetical protein PTSG_12845 [Salpingoeca sp. ATCC 50818]
Length = 984
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 131/205 (63%), Gaps = 9/205 (4%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+ AW LH +M+ + +F +PTP+Q+ C+ A +D++ AETGSGKTLAFG
Sbjct: 287 VDMSAWLPFGLHSSIMEGLQAQRFTKPTPVQEECLQPAIQGFRDIVACAETGSGKTLAFG 346
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
LP++Q ++ R++ L+AL++ PTRELA+QV DHL +AK
Sbjct: 347 LPVIQHIINLRQQGDDG---------DDDALTRLKALVVCPTRELAIQVRDHLVAIAKHC 397
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+RVV IVGG+S +KQ RLL RPE++VGTPGRLW+L++ G +L L F V+DEAD
Sbjct: 398 GIRVVAIVGGISVQKQRRLLAGRPEIIVGTPGRLWDLIAAGNDAFHDLRRLRFLVIDEAD 457
Query: 352 RMIENGHFRELQSIIDMLPMTNGSN 376
RM+E GHF+EL++I+ LPM ++
Sbjct: 458 RMVEQGHFKELENILRKLPMAERTD 482
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 13/134 (9%)
Query: 396 KRQTLVFSATIALSAD-FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
KRQT + SAT+ +A FRK+ K+ +++ + + G+R+ VDL
Sbjct: 647 KRQTYILSATLLYTAQQFRKRRKNPQQ---------DAVSRIVKLCGLRSKYKQVDLVGR 697
Query: 455 CV-LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL-GID 512
V + +KL ES I C E+KD YLYY + H GRTIVF SI + I +L ++L +
Sbjct: 698 RVEVTSKLSESRILCTTEEKDVYLYYFVHRH-PGRTIVFVNSIDNVHRIVNLFRLLNATN 756
Query: 513 VWTLHAQMQQRARL 526
VW LH++MQQR RL
Sbjct: 757 VWGLHSKMQQRKRL 770
>gi|40018540|ref|NP_954550.1| ATP-dependent RNA helicase DDX24 [Rattus norvegicus]
gi|33638101|gb|AAQ24160.1| DEAD box polypeptide 24 [Rattus norvegicus]
gi|67677909|gb|AAH97262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
gi|149025406|gb|EDL81773.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
Length = 851
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 164/294 (55%), Gaps = 24/294 (8%)
Query: 241 EREKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPI 298
+ E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +
Sbjct: 356 DEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRELAVQVRQHIDAVAKFTGINTAIL 415
Query: 299 VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 358
VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E H
Sbjct: 416 VGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKDH 475
Query: 359 FRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKH 418
F EL +++ML S+ N RQTLVFSAT+ L ++ H
Sbjct: 476 FAELSQLLEML--------NDSQYNPN-----------RQTLVFSATLTLVHQAPARILH 516
Query: 419 GSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLY 478
K + ++ ++ L ++ GMR ++DLT L E+ I C+ ++KD YLY
Sbjct: 517 K--KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLY 574
Query: 479 YILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
Y L + GR++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 575 YFL-MQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 627
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 190 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 249
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 250 PMIHSVLQ 257
>gi|167538304|ref|XP_001750817.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770734|gb|EDQ84416.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 126/203 (62%), Gaps = 19/203 (9%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW L+L L +++ R F PTPIQ+A I A +DVI AA TGSGKTLAFGL
Sbjct: 289 DLAAWTVLQLDRELAEAVVRRGFTAPTPIQQAAIVPAVRDYRDVIAAAPTGSGKTLAFGL 348
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ-----VTDHLKGV 287
P++Q +L R + L+ LI+TPTRELALQ + HLK +
Sbjct: 349 PVLQHILNRRARGRST--------------AGLQCLILTPTRELALQQSLWQIQQHLKPL 394
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A ++VRV IVGGM+ KQERLLKA+PE+VVGTPGRLWE++ G H L +L F VL
Sbjct: 395 ATPLSVRVTAIVGGMALVKQERLLKAKPEIVVGTPGRLWEIIQSGHVHFAHLDSLRFLVL 454
Query: 348 DEADRMIENGHFRELQSIIDMLP 370
DEADRM+E GHF EL I+ LP
Sbjct: 455 DEADRMVERGHFAELDKILARLP 477
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 22/154 (14%)
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA--------GMRANVA 447
KRQT +FSAT L F+K G K ++ G + +T ERA G+R + A
Sbjct: 656 KRQTFLFSAT--LLPQFQK----GGRKGQRQAGGKGATDTSIERALSRVVQACGLRKSFA 709
Query: 448 IVDLTNMCV-----LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
+DL+ + LA L+E I C DK+ YLYY L GRT+VF +I L+ +
Sbjct: 710 QLDLSTQIMAGEQRLARGLQEVRITCPSTDKEVYLYYFLR-RFPGRTLVFVNTIDVLKRL 768
Query: 503 SSLLKILGIDVWTLHAQMQQRARLKLFSQMITWI 536
++L ++G++ LHAQMQQ RL F Q + ++
Sbjct: 769 KTVLDLVGLNPQALHAQMQQ--RLLNFRQRLKFL 800
>gi|6319618|ref|NP_009700.1| Mak5p [Saccharomyces cerevisiae S288c]
gi|586550|sp|P38112.1|MAK5_YEAST RecName: Full=ATP-dependent RNA helicase MAK5; AltName:
Full=Maintenance of killer protein 5
gi|536442|emb|CAA85100.1| MAK5 [Saccharomyces cerevisiae]
gi|547578|emb|CAA55539.1| YBR1119 [Saccharomyces cerevisiae]
gi|285810473|tpg|DAA07258.1| TPA: Mak5p [Saccharomyces cerevisiae S288c]
gi|392300984|gb|EIW12073.1| Mak5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 773
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 196/363 (53%), Gaps = 42/363 (11%)
Query: 177 WNELR-LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W L L +++S+ L F PT IQK IP QG DV+G A TGSGKTLA+G+PI+
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIV 230
Query: 236 QRLLEE-REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--- 291
++L+ +K K + +LI TPTRELA QVTDHLK + + +
Sbjct: 231 EKLISNFSQKNKKPI-----------------SLIFTPTRELAHQVTDHLKKICEPVLAK 273
Query: 292 -NVRVVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + ++ +LD
Sbjct: 274 SQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILD 333
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++++GHF E + II L + N+ SE + K QTL+FSAT ++
Sbjct: 334 EADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSATFSI 383
Query: 409 SADFRKKLKHGSLKSKQSVNG---LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEES 464
F K +K ++ N LN+ I+ L + + I+D ++++++ES
Sbjct: 384 DL-FDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKES 442
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
IEC ++D Y YY L++ G T++FC +I +++ ++ L LGI + +H+ M Q+
Sbjct: 443 LIECPPLERDLYCYYFLTMF-PGTTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKN 501
Query: 525 RLK 527
RLK
Sbjct: 502 RLK 504
>gi|440296216|gb|ELP89056.1| ATP-dependent RNA helicase mak5, putative [Entamoeba invadens IP1]
Length = 606
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 207/377 (54%), Gaps = 59/377 (15%)
Query: 157 PDDAEEELVNEAEISTEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
P+ EEE +++A++ E W +L ++ +++++Y L F PT IQK IP A KD
Sbjct: 44 PNAMEEEPISDADLYIEMKEWRKLYKIDITILRALYDLGFIYPTEIQKFAIPKALTSQKD 103
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL---RALIITP 272
+IG+A TGSGKTL+F +P++QR +E KG + LI+ P
Sbjct: 104 LIGSAPTGSGKTLSFLIPLVQRFIE---------------------KGTFDTTQCLILVP 142
Query: 273 TRELALQVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
TRELA+Q+ DHL+ + K + V +VGG+++ KQ RLL P +V+GTPGR++EL +
Sbjct: 143 TRELAVQIRDHLQKLTKYLPRVTSCVVVGGLASVKQVRLLLQEPTIVIGTPGRIFELYNN 202
Query: 332 GEKHLVE-LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ +++ L +L + V+DEADRM+E GHF EL ++ VTV
Sbjct: 203 QDTPVLKTLPSLPYLVVDEADRMVEPGHFSEL---------------------KDLVTVV 241
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
S ++QT VFSAT+ L+A+ + K+ Q+ +E + M+ + +VD
Sbjct: 242 S--NAEKQTFVFSATMQLAAE----MWAAKFKTTQT----TQMEMMVSALNMK-DTELVD 290
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
++ A ++EE I + +D L+Y+L+ G+T+VF +I ++ + LL+++
Sbjct: 291 ISTPEQTAKEMEEKKITVTGKLRDEALFYVLTKLNPGKTLVFVNAITMVKRVVPLLQMVN 350
Query: 511 IDVWTLHAQMQQRARLK 527
I V +L++ M+ RL+
Sbjct: 351 IKVSSLYSGMEMAQRLR 367
>gi|349576517|dbj|GAA21688.1| K7_Mak5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 773
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 195/363 (53%), Gaps = 42/363 (11%)
Query: 177 WNELR-LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W L L +++S+ L F PT IQK IP QG DV+G A TGSGKTLA+G+PI+
Sbjct: 172 WTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIV 230
Query: 236 QRLLEE-REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--- 291
++L+ +K K + +LI TPTRELA QVTDHLK + + +
Sbjct: 231 EKLISNFSQKNKKPI-----------------SLIFTPTRELAHQVTDHLKKICEPVLAK 273
Query: 292 -NVRVVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
++ + GG+S +KQ+RLLK ++V+ TPGR EL+ + + +LD
Sbjct: 274 SQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILD 333
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++++GHF E + II L + N+ SE + K QTL+FSAT ++
Sbjct: 334 EADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSATFSI 383
Query: 409 SADFRKKLKHGSLKSKQSVNG---LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEES 464
F K +K ++ N LN+ I+ L + + I+D ++++++ES
Sbjct: 384 DL-FDKLSSSRQVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKES 442
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
IEC ++D Y YY L++ G T++FC +I +++ ++ L LGI + +H+ M Q+
Sbjct: 443 LIECPPLERDLYCYYFLTMF-PGTTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKN 501
Query: 525 RLK 527
RLK
Sbjct: 502 RLK 504
>gi|45190633|ref|NP_984887.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|74693626|sp|Q757I6.1|MAK5_ASHGO RecName: Full=ATP-dependent RNA helicase MAK5
gi|44983612|gb|AAS52711.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|374108110|gb|AEY97017.1| FAER027Wp [Ashbya gossypii FDAG1]
Length = 752
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 200/378 (52%), Gaps = 56/378 (14%)
Query: 165 VNEAEISTEFDAW-NELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
++EAE + E +W N ++L +++ + RL F PT IQ IP A G D++G A TG
Sbjct: 170 LDEAE-APELPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKAL-DGHDIMGKASTG 227
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDH 283
SGKTLA+G+PI++ ++ + + + LI TPTRELA QVTDH
Sbjct: 228 SGKTLAYGIPILEGIIRDDTDSRPI------------------GLIFTPTRELAHQVTDH 269
Query: 284 LKGVAKGINVR----VVPIVGGMSTEKQERLLKAR--PEVVVGTPGRLWELMSGGEKHLV 337
L+ V + R ++ + GG+S +KQERLLK + VVV TPGR EL+ + +
Sbjct: 270 LREVGALLVKRNPYSIMCLTGGLSIQKQERLLKYKGSARVVVATPGRFLELLEKDQTLID 329
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLP----MTNGSNKGQSEQTQNCVTVSSLQ 393
+ VLDEADR++++GHF E + I+ L TNG G
Sbjct: 330 RFAKVDTLVLDEADRLLQDGHFEEFERILKHLSRARKFTNGKKHGW-------------- 375
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIET----LSERAGMRANVAIV 449
+T+++SAT +L D+ KL + S K + N +E L + R I+
Sbjct: 376 ----KTMIYSATFSL--DYFNKLSNTSWKKMKKAPSENEMEEVLKHLMTKIPFRGKPLII 429
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
D +A++++ES IEC ++D Y+YY ++++ G T+VFC +I +++ +++ L L
Sbjct: 430 DTNPEQKVASQIKESLIECLPTERDLYVYYFVTLY-PGTTLVFCNAIDSVKKLNAYLHNL 488
Query: 510 GIDVWTLHAQMQQRARLK 527
I + +H+ M Q+ RLK
Sbjct: 489 KISAFQIHSSMLQKNRLK 506
>gi|354546640|emb|CCE43372.1| hypothetical protein CPAR2_210170 [Candida parapsilosis]
Length = 800
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 203/361 (56%), Gaps = 38/361 (10%)
Query: 180 LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLL 239
+ L P + + L F +PTPIQK IP A +GKDV+G A TGSGKTLA+G+PI+++ L
Sbjct: 184 VSLSPYTLNGLANLNFTKPTPIQKRTIPIAI-EGKDVVGKATTGSGKTLAYGIPILEKYL 242
Query: 240 EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK--GINVR-VV 296
+ + + ++D+ + P G +I TPTRELA QV DHL +A+ ++VR +V
Sbjct: 243 QSLDLVKQNVKDQ----KINRPNG----IIFTPTRELAHQVVDHLNKLAQYSPLSVRGIV 294
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG++ +KQ+RLLK P ++V TPGR EL + + + VLDEADR++++
Sbjct: 295 SVTGGLAIQKQQRLLKMGPGIIVATPGRFLELCENDSELMKRMSLTDIIVLDEADRLLQD 354
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA--LSADFRK 414
GHF E + I+++L T NK K QTLVFSAT + L K
Sbjct: 355 GHFEEFEKILELLGKTRPKNKNVDW--------------KWQTLVFSATFSRDLFGKLDK 400
Query: 415 KLKHGSLKSKQSVNGLNS-------IETLSERAGMR-ANVAIVDLTNMCVLANKLEESFI 466
+ K + KQ ++G NS IE L+E+ + ++D +++ ++ E+ +
Sbjct: 401 QQKPKAKNQKQQIDG-NSLVQNDEIIELLNEKLHFKDKKPVLIDANPKEIVSGQITEALV 459
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
EC ++D YLYY + +G T+VF SI +++ + LL+ L I + +H+ M+Q+ RL
Sbjct: 460 ECGATERDLYLYY-FLLMYKGSTLVFANSIDSVKRLVPLLENLKIPAFAIHSSMEQKQRL 518
Query: 527 K 527
+
Sbjct: 519 R 519
>gi|367013592|ref|XP_003681296.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
gi|359748956|emb|CCE92085.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
Length = 750
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 205/367 (55%), Gaps = 49/367 (13%)
Query: 173 EFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
EF WN+L +L ++ + +L F +PT IQ IP A +G+D++G A TGSGKTLA+G
Sbjct: 171 EFPEWNKLGKLSVTTLQGLTKLGFSKPTDIQAKAIPEAM-KGEDIMGKAATGSGKTLAYG 229
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
+PI++++L ++++ + ALI TPTRELA QVT HL+ + + I
Sbjct: 230 IPILEKMLNNKDQSKAI------------------ALIFTPTRELAQQVTKHLQQIGELI 271
Query: 292 ----NVRVVPIVGGMSTEKQERLLK--ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
++ + GG+S +KQERLLK VVV TPGR EL+ E + +
Sbjct: 272 LKKSPYAIMSLTGGLSIQKQERLLKYDGSARVVVATPGRFLELIEKNESLVKRFAKIDTL 331
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
VLDEADR++++GHF E + I+ L G S ++ + +++ QT++FSAT
Sbjct: 332 VLDEADRLLQDGHFDEFEKILKYL--------GNSRKSTD-------KKEGWQTMIFSAT 376
Query: 406 IALSADFRKKLKHGSL----KSKQSVNGLNSI-ETLSERAGMRANVAIVDLTNMCVLANK 460
A+ D KL S K K++ + + + + L + ++ I+D + ++++
Sbjct: 377 FAM--DLFNKLSTTSWSKFKKGKENASEMEIVLQHLMTKIHFKSKPVIIDTDSEQRVSSR 434
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
++ES IEC ++D Y YY ++++ G T++FC SI +++ +++ L L + + +H+ M
Sbjct: 435 IKESLIECGPLERDLYCYYFVTMY-PGTTLIFCNSIDSVKKLTAYLNNLKVPSFQIHSSM 493
Query: 521 QQRARLK 527
Q+ RL+
Sbjct: 494 TQKNRLR 500
>gi|321458546|gb|EFX69612.1| hypothetical protein DAPPUDRAFT_300875 [Daphnia pulex]
Length = 621
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 158/266 (59%), Gaps = 25/266 (9%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
LRALIITPTRELA+Q+ HLK VAK ++ + ++GGM+ KQER+L P++V+GTPGR
Sbjct: 195 LRALIITPTRELAVQIEKHLKAVAKYTDISICLVIGGMAAPKQERILSKGPDIVIGTPGR 254
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LWE++ GG HL ++ + + LDE DR++E GHF E++++++ + NK +
Sbjct: 255 LWEMIEGGNSHLSQIKDIRYLALDETDRLLEKGHFAEVRTLLEHI------NKDEE---- 304
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRA 444
+++ RQ VFSAT+ L+ D +L G+LKSK+ + ++ L G+R
Sbjct: 305 --------KKRWRQNFVFSATLTLAHDLPNRL--GNLKSKKKKEAMK-LDKLLSLVGVRP 353
Query: 445 NVAIVDLTNMCVL---ANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
+VDLT A+ E EDKD YLYY L H GRT+VFC SI +R
Sbjct: 354 KAKVVDLTTQVRSLKPASLSEMKLYSATVEDKDYYLYYFLR-HNPGRTLVFCNSINNVRR 412
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLK 527
++S+ +L + LHAQM Q+ RLK
Sbjct: 413 LTSVFTLLETNPLPLHAQMHQKQRLK 438
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 56/82 (68%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
EI+ + W + L ++++++ L F+ PT IQ AC+P A KD++GAAETGSGKTL
Sbjct: 33 EITPDMIIWKAMYLPDPIVRAVWELGFQTPTAIQLACLPTAMKGRKDIVGAAETGSGKTL 92
Query: 229 AFGLPIMQRLLEEREKAAKMLE 250
AFG+PI+ +L+++E K L+
Sbjct: 93 AFGIPILNGILKDKEFELKKLK 114
>gi|74141078|dbj|BAE22104.1| unnamed protein product [Mus musculus]
Length = 622
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 159/281 (56%), Gaps = 24/281 (8%)
Query: 243 EKAAKMLEDKGEEAEKYA--PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
E+A K+ ++ ++ Y P+ L L++TPTRELA+QV H+ VAK + +VG
Sbjct: 364 EQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVG 423
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E GHF
Sbjct: 424 GMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFA 483
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
EL +++ML N S S RQTLVFSAT+ L ++ H
Sbjct: 484 ELSQLLEML---NDSQYNPS----------------RQTLVFSATLTLVHQAPARILHK- 523
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
K + ++ + ++ L ++ GMR ++DLT L E+ I C+ ++KD YLYY
Sbjct: 524 -KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYF 582
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
L + GR++VF SI+ ++ +S LLK+L + TLHA M
Sbjct: 583 L-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMH 622
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 191 DVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 250
Query: 233 PIMQRLLE 240
P++ +L+
Sbjct: 251 PMIHSVLQ 258
>gi|366996959|ref|XP_003678242.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
gi|342304113|emb|CCC71900.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
Length = 731
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 199/369 (53%), Gaps = 46/369 (12%)
Query: 171 STEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
S + W +L +M+ + L F +PT IQ IP A + +D++G A TGSGKTLA
Sbjct: 147 SVDLPDWTKLATFSTTIMQGLQSLGFTKPTEIQAKAIPFAL-KNEDIMGKASTGSGKTLA 205
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
+G+PI++ L++ G ++ K ALI TPTRELA QVT HL+ ++K
Sbjct: 206 YGIPILENLIKTF----------GNDSNKPI------ALIFTPTRELAQQVTKHLQNISK 249
Query: 290 GI----NVRVVPIVGGMSTEKQERLLKA--RPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
++ + GG+S +KQERLLK ++V+ TPGR EL+ + + +
Sbjct: 250 LFLKNSQYSILSLTGGLSIQKQERLLKYDNSGKIVIATPGRFLELLEKNNELVERFAQID 309
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADR++++GHF E + I+ L GQ + L+ QT+++S
Sbjct: 310 TLVLDEADRLLQDGHFDEFEKILKYL--------GQKRKEM------KLKNTYWQTMIYS 355
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNS-IET----LSERAGMRANVAIVDLTNMCVLA 458
AT S D KL + S KS + V +S +ET L + ++ ++D+ ++
Sbjct: 356 AT--FSIDLFDKLANSSWKSNKKVKQYDSEMETVLHHLMNKIHFKSKPILIDMNPNQKIS 413
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
++++ES IEC ++D Y YY +++ G T++FC +I +++ +S +L ILG+ +H+
Sbjct: 414 SQIKESLIECAPTERDLYCYYFITMF-PGTTLIFCNAIESVKKLSVMLNILGVSCLQIHS 472
Query: 519 QMQQRARLK 527
M Q+ RL+
Sbjct: 473 SMTQKNRLR 481
>gi|302849708|ref|XP_002956383.1| hypothetical protein VOLCADRAFT_31081 [Volvox carteri f.
nagariensis]
gi|300258289|gb|EFJ42527.1| hypothetical protein VOLCADRAFT_31081 [Volvox carteri f.
nagariensis]
Length = 495
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 169/306 (55%), Gaps = 43/306 (14%)
Query: 238 LLEEREKAAKMLEDKGEEAEKYAP------KGHLRALIITPTRELALQVTDHLKGVAKGI 291
L E+ + + +G++ ++ P G LRALI+TPTRELALQV HL+ + +
Sbjct: 136 LQREKRGVVETPKQRGKQLQRQVPMGPAPQPGPLRALILTPTRELALQVCSHLQVIGRVC 195
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG--------GEKHLVELHTLS 343
VRV IVGG+S KQ RLL ARP V+V TPGRLW+L+ HL +L LS
Sbjct: 196 GVRVAAIVGGISDVKQARLLAARPAVLVATPGRLWDLIPPSTDRHGPRAAAHLADLTHLS 255
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
F VLDEADRM+ GH+++ +G+ QT VFS
Sbjct: 256 FLVLDEADRMVAQGHYKQ---------QQQQQQRGKKHLL--------------QTFVFS 292
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA--IVDLTNMCVLANKL 461
AT+ L +K+L+ + G ++E+L +R R + +VDLT LA+++
Sbjct: 293 ATLTLPLFLKKRLRR---GGGGAGGGAATLESLMDRVPFRTSPPPRVVDLTPQRRLADRV 349
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
E+ + C + ++D LYY+L+VH GRT+VF +++A+R +++LLK LG+ LHAQ Q
Sbjct: 350 AEAAVNCLDTERDEVLYYLLAVH-PGRTLVFANAVSAIRRVAALLKALGLPALALHAQQQ 408
Query: 522 QRARLK 527
QR RLK
Sbjct: 409 QRQRLK 414
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
AW E LHP ++ + F PTPIQ+ C+ A D+IGAA+TGSGKTLAFGLP
Sbjct: 1 LSAWAEFELHPDVLAGLAACGFTSPTPIQRECLHPAIRARVDIIGAAQTGSGKTLAFGLP 60
Query: 234 IMQRL 238
IM +L
Sbjct: 61 IMHKL 65
>gi|213406505|ref|XP_002174024.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
gi|212002071|gb|EEB07731.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
Length = 695
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 196/369 (53%), Gaps = 55/369 (14%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
+E+ N ++S W+ + L ++ + +L F PT IQ+ +P A G DVIG A
Sbjct: 153 DEDEANAVDVSK----WSNIPLSAAILGRLSKLGFSAPTHIQELVLPVAM-AGSDVIGKA 207
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
ETGSGKTLAFG+PI++ L K ++ALI+ PTRELA Q+
Sbjct: 208 ETGSGKTLAFGIPILEHCLRNINKG-------------------IQALIMAPTRELAQQI 248
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+HL+ ++ +V + GG++ +KQ+RLL +P +V+GTPGRLW ++S + E
Sbjct: 249 YNHLEQCNPSTDIHIVTVTGGLAIQKQQRLLAKKPSIVIGTPGRLWSVIS-SQGFDEEFK 307
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
+ VLDEADR+++ HF EL +IID+L G +QT RQT
Sbjct: 308 NVKMLVLDEADRLLQKNHFEELHNIIDLL--------GNPKQTN------------RQTF 347
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLN--SIETLSERAGMRANVAIVDLTNMCVLA 458
+FSAT F L+ +L+ KQ ++G + S+ L ++ +D +A
Sbjct: 348 IFSAT------FDAHLQE-NLRKKQLIDGNDKQSMGYLLKQIHFLGRPEFLDANPETSVA 400
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
K+ E +EC KD YLYY L G+TIVF + ++ ++ LLK LG+ +L+A
Sbjct: 401 TKVTEGLVECIPSQKDLYLYYFLLR-YPGKTIVFANGVEDVKRVTPLLKELGVKAHSLYA 459
Query: 519 QMQQRARLK 527
QM+Q+ RL+
Sbjct: 460 QMEQKKRLQ 468
>gi|156848503|ref|XP_001647133.1| hypothetical protein Kpol_1036p17 [Vanderwaltozyma polyspora DSM
70294]
gi|160409987|sp|A7TEG8.1|MAK5_VANPO RecName: Full=ATP-dependent RNA helicase MAK5
gi|156117817|gb|EDO19275.1| hypothetical protein Kpol_1036p17 [Vanderwaltozyma polyspora DSM
70294]
Length = 763
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 199/353 (56%), Gaps = 52/353 (14%)
Query: 187 MKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
+ + +L F +PT IQ+ IP A +G+D++G A TGSGKTLA+G+PI+++L++ + A
Sbjct: 204 LHGLTKLGFNKPTLIQEEAIPMAL-KGEDIMGKASTGSGKTLAYGIPIIEKLMKSKSNTA 262
Query: 247 KMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR----VVPIVGGM 302
P G LI TPTRELA QVTDHL+ +A I + ++ + GG+
Sbjct: 263 --------------PIG----LIFTPTRELAKQVTDHLRKIASLIVDKSPHAILSLTGGL 304
Query: 303 STEKQERLLK--ARPEVVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENGHF 359
S +KQERLLK +VV TPGR EL+ +K LVE +S VLDEADR++++GHF
Sbjct: 305 SIQKQERLLKYEGSGRIVVATPGRFLELIEK-DKTLVERFSQISTLVLDEADRLLQDGHF 363
Query: 360 RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 419
E ++I+ L +++N ++ QT++FSAT A D KL H
Sbjct: 364 DEFENILKYL----------GRESKN-------RKHNWQTMIFSATFA--TDLFDKLSHA 404
Query: 420 SLKS-KQSVNGLNSIET----LSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
S K+ K N +E L + ++ ++D ++++++ES IEC ++D
Sbjct: 405 SWKNMKTPSKNENEMEIVLKHLMTKIHFKSKPILIDANPEDKVSSQIKESLIECAATERD 464
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ YY +S++ G+T++FC +I +++ +++ L L I + +H+ M Q+ RL+
Sbjct: 465 LFCYYFVSMY-PGKTLIFCNAIDSVKKLTAYLNNLNISCFQIHSSMTQKNRLR 516
>gi|323356090|gb|EGA87895.1| Mak5p [Saccharomyces cerevisiae VL3]
Length = 526
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 191/352 (54%), Gaps = 39/352 (11%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
+++S+ L F PT IQK IP QG DV+G A TGSGKTLA+G+PI+++L+ +
Sbjct: 3 ILQSLQNLNFLRPTEIQKKSIPVIM-QGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQK 61
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGG 301
K P +LI TPTRELA QVTDHLK + + + ++ + GG
Sbjct: 62 NK------------KPI----SLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGG 105
Query: 302 MSTEKQERLLKA--RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF 359
+S +KQ+RLLK ++V+ TPGR EL+ + + +LDEADR++++GHF
Sbjct: 106 LSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHF 165
Query: 360 RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG 419
E + II L + N+ SE + K QTL+FSAT ++ F K
Sbjct: 166 DEFEKIIKHLLVERRKNRENSEGSS----------KIWQTLIFSATFSIDL-FDKLSSSR 214
Query: 420 SLKSKQSVNG---LNS-IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+K ++ N LN+ I+ L + + I+D ++++++ES IEC ++D
Sbjct: 215 QVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDL 274
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
Y YY L++ G T++FC +I +++ ++ L LGI + +H+ M Q+ RLK
Sbjct: 275 YCYYFLTMFP-GTTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLK 325
>gi|406696280|gb|EKC99572.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 779
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 193/366 (52%), Gaps = 35/366 (9%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW ++ LH L K + L F PT IQK +P A +G+DV+G AET TLA+ LP++
Sbjct: 177 AWAKIPLHASLKKCLLGLGFANPTEIQKQAVPLAL-EGRDVVGVAET----TLAYSLPVL 231
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--- 292
LL + + K L ALI+ PTRELA+QVTDHL V K +
Sbjct: 232 SYLLRQ-------------PPPRAGKKRPLSALILCPTRELAIQVTDHLTNVVKSVTPEG 278
Query: 293 -----VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
+ V +VGG+S KQ R+L +++V TPGRLW+L+ + L TL F ++
Sbjct: 279 AKVPRISVGSVVGGLSAHKQRRILDRGADILVATPGRLWDLVKTDDALAASLRTLRFLIV 338
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ----RKKRQTLVFS 403
DEADRMIENGHF EL+ I+ + T + + + ++L+ R QT VFS
Sbjct: 339 DEADRMIENGHFAELEHIVQLSRRTQVQAEDEDDDPVFAQMATALEQAEPRDDLQTFVFS 398
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNS-IETLSERAGMRANV-AIVDLTNMCVLANKL 461
AT LS D ++ LK + + + S ++ L E R AIVDLT + L
Sbjct: 399 AT--LSKDLQENLKKRRRRPLKRKSKRASTLDELLETLDFRDETPAIVDLTPKGNKVSTL 456
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
E+ ++ +KD Y Y + GR++VF SI +R + LL+ L + V+ LH+Q+Q
Sbjct: 457 REAMVDAVLAEKDLY-LYYFLLRYPGRSLVFVGSIDGIRCLVPLLEQLRLPVFPLHSQLQ 515
Query: 522 QRARLK 527
Q+ RL+
Sbjct: 516 QKQRLR 521
>gi|401883813|gb|EJT48000.1| ATP dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
Length = 779
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 192/366 (52%), Gaps = 35/366 (9%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
AW ++ LH L K + L F PT IQK +P A +G+DV+G AET TLA+ LP++
Sbjct: 177 AWAKIPLHASLKKCLLGLGFANPTEIQKQAVPLAL-EGRDVVGVAET----TLAYSLPVL 231
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--- 292
LL + + K L ALI+ PTRELA+QVTDHL V K +
Sbjct: 232 SYLLRQ-------------PPPRAGKKRPLSALILCPTRELAIQVTDHLTNVVKSVTPEG 278
Query: 293 -----VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
+ V +VGG+S KQ R+L +++V TPGRLW+L+ + L TL F ++
Sbjct: 279 AKVPRISVGSVVGGLSAHKQRRILDRGADILVATPGRLWDLVKTDDALAASLRTLRFLIV 338
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ----RKKRQTLVFS 403
DEADRMIENGHF EL+ I+ + T + + + ++L+ R QT VFS
Sbjct: 339 DEADRMIENGHFAELEHIVQLSRRTQVQAEDEDDDPVFAQMATALEQAEPRDDLQTFVFS 398
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNS-IETLSERAGMRANV-AIVDLTNMCVLANKL 461
AT LS D ++ LK + + S ++ L E R AIVDLT + L
Sbjct: 399 AT--LSKDLQENLKKRRRRPLKRKGKRASTLDELLETLDFRDETPAIVDLTPKGNKVSTL 456
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
E+ ++ +KD Y Y + GR++VF SI +R + LL+ L + V+ LH+Q+Q
Sbjct: 457 REAMVDAVLAEKDLY-LYYFLLRYPGRSLVFVGSIDGIRRLVPLLEQLRLPVFPLHSQLQ 515
Query: 522 QRARLK 527
Q+ RL+
Sbjct: 516 QKQRLR 521
>gi|320165920|gb|EFW42819.1| ATP-dependent RNA helicase DDX24 [Capsaspora owczarzaki ATCC 30864]
Length = 1137
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 8/210 (3%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
T+ WN LH LL+K + + PTPIQ+ + +D+IGA+ETGSGKTLAF
Sbjct: 429 TDMSEWNGFGLHELLIKGLATAGYARPTPIQREALLKGLRDYQDIIGASETGSGKTLAFA 488
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAE--------KYAPKGHLRALIITPTRELALQVTDH 283
LPI+Q +L R+K A G++ E K L ALI+TPTRELA Q+ +
Sbjct: 489 LPILQVILNGRDKEAARESQNGDDNEAETDAASKKVFKNRPLSALILTPTRELASQIREQ 548
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
+ VAK ++ VV ++GG+S EKQ R+L P++VV TPGRLW+ MS G +HL EL L
Sbjct: 549 IVKVAKFTDISVVTVIGGLSAEKQRRVLSYCPDIVVATPGRLWDYMSQGNQHLTELRYLR 608
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTN 373
VLDEADRM+ GHF EL I+ +LP+ N
Sbjct: 609 HLVLDEADRMVATGHFEELTKILAILPVQN 638
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
Query: 396 KRQTLVFSATIALSAD-FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
KRQT VFSAT+ L + FRK + S K K + L + + M+ + AI+DL+
Sbjct: 772 KRQTFVFSATMTLDRESFRKSRRVVSKKKKVDRSPLAVV---LRQLDMQDDPAIIDLSGK 828
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
LA L E+ I C +E+KD YLYY+L GRT+VF SI +R + S+ +LG+
Sbjct: 829 RGLAQTLTEAKISCLKEEKDMYLYYLLK-RFPGRTLVFVNSIDCIRRVVSIFVLLGLKPL 887
Query: 515 TLHAQMQQRARLK 527
LHA +QQR R+K
Sbjct: 888 PLHANLQQRQRMK 900
>gi|50284995|ref|XP_444926.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661507|sp|Q6FY67.1|MAK5_CANGA RecName: Full=ATP-dependent RNA helicase MAK5
gi|49524228|emb|CAG57819.1| unnamed protein product [Candida glabrata]
Length = 733
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 196/368 (53%), Gaps = 48/368 (13%)
Query: 171 STEFDAWNE-LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
S E W + + L + + L F E TPIQK IPAA +GKD++G A TGSGKTLA
Sbjct: 150 SGELPGWTDTVDLSMTTINGLSNLGFTEMTPIQKLSIPAAL-EGKDIMGKASTGSGKTLA 208
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
+G+PI++++++ ++ L G +I TPTRELA QVT HL+ V
Sbjct: 209 YGIPIIEKMIKSKDN----LRTNG--------------IIFTPTRELAQQVTKHLQNVCS 250
Query: 290 GI----NVRVVPIVGGMSTEKQERLLK--ARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
+ ++ + GG+S +KQERLLK +VV TPGR EL+ E+ + +
Sbjct: 251 MLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATPGRFLELIEKNEELMKRFAKID 310
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADR++++GHF E + I+ L S K + QTL++S
Sbjct: 311 VLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNM---------------EYWQTLIYS 355
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIET----LSERAGMRANVAIVDLTNMCVLAN 459
AT S D KL + S K K + + +E+ L + ++ ++D ++
Sbjct: 356 AT--FSTDLFDKLANSSWKKKNNSKDESEMESVLKHLMTKINFKSKPMMIDANPEDKISA 413
Query: 460 KLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
+++ES IEC ++D Y YY ++++ G T++FC SI +++ +++ L LGI+ + +H+
Sbjct: 414 QIKESLIECAPLERDLYCYYFVTLY-PGTTLIFCNSIESVKKLNAYLINLGINSFQIHSS 472
Query: 520 MQQRARLK 527
M Q+ RLK
Sbjct: 473 MTQKNRLK 480
>gi|149641853|ref|XP_001511203.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ornithorhynchus
anatinus]
Length = 812
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 150/268 (55%), Gaps = 31/268 (11%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
L L++TPTRELA+QV H+ VA+ ++ +VGGM+ +KQ+R+L RPE+V+ TPGR
Sbjct: 355 LLGLVLTPTRELAVQVKHHIDAVARFTGIKTALLVGGMAAQKQQRVLNRRPEIVIATPGR 414
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LWEL+ HL L L V+DEADRM+E GHF EL +++ML N Q
Sbjct: 415 LWELIKEKHPHLSNLRRLRCLVIDEADRMVERGHFAELSQLLEML------NDSQYN--- 465
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSAD-----FRKKLKHGSLKSKQSVNGLNSIETLSER 439
+RQT VFSAT+ L + F+KK L +K ++ L ++
Sbjct: 466 ----------PRRQTFVFSATLTLVHEVPARVFQKKKHAHKLDTK------TKLDQLVQK 509
Query: 440 AGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAAL 499
GMR ++DLT L E+ I C+ E+KD YLYY L + GRT+VF SI +
Sbjct: 510 IGMRGKPKVIDLTRKEATVEALTETRIHCEAEEKDFYLYYFL-LRYPGRTMVFANSIDCI 568
Query: 500 RHISSLLKILGIDVWTLHAQMQQRARLK 527
+ +++LL IL D LHA M Q+ RLK
Sbjct: 569 KRLTALLTILERDPLPLHANMHQKQRLK 596
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 164 LVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
L A+ T+ AW +L + +++++ L F+ PTPIQ + A D++GAAETG
Sbjct: 190 LSGSADGETDMSAWKDLFVPKPVLRALSSLGFEAPTPIQALTLTPAIRDNLDILGAAETG 249
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEA-EKYAPKGHL 265
SGKTLAF +P++ +L R++ + KG++A P+G L
Sbjct: 250 SGKTLAFAIPMIHSVLRWRKEN----DTKGDKAGAPRVPEGSL 288
>gi|365982507|ref|XP_003668087.1| hypothetical protein NDAI_0A06900 [Naumovozyma dairenensis CBS 421]
gi|343766853|emb|CCD22844.1| hypothetical protein NDAI_0A06900 [Naumovozyma dairenensis CBS 421]
Length = 659
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 200/367 (54%), Gaps = 45/367 (12%)
Query: 177 WNELRLHPL-LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W L L +++ + L F +PT IQ IP A + D++G A TGSGKTLA+G+PI+
Sbjct: 71 WTNLAKFSLTILQGLQSLGFTKPTAIQAKAIPYAL-ENADIMGKASTGSGKTLAYGIPIL 129
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA----KGI 291
+ L++ +K + ++ K ALI TPTRELA QVT HL+ ++ K
Sbjct: 130 ENLIKTAKK---------DSSQTDGIKNKPIALIFTPTRELAQQVTKHLQNISQLFLKNS 180
Query: 292 NVRVVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
++ + GG+S +KQERLLK ++V+ TPGR EL+ + + VLDE
Sbjct: 181 PYAILSLTGGLSIQKQERLLKYDNSGKIVIATPGRFLELLEKNNDLIERFCQIDTLVLDE 240
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR----QTLVFSAT 405
ADR++++GHF E + I+ L GQ + L+ KK QT+++SAT
Sbjct: 241 ADRLLQDGHFDEFEKILKYL--------GQKRK--------ELKLKKANQYWQTMIYSAT 284
Query: 406 IALSADFRKKLKHGSLKSKQSVNGL-NSIET----LSERAGMRANVAIVDLTNMCVLANK 460
S D KL + S KS + + N +ET L + ++ I+D+ ++++
Sbjct: 285 --FSIDLFDKLANSSWKSNKKIKQYENEMETVLHHLMNKIHFQSKPIIIDMNPDQKISSQ 342
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
++ES IEC ++D Y YY ++++ G T++FC +I +++ +S++L IL I + +H+ M
Sbjct: 343 IKESLIECAPTERDLYCYYFITMYP-GSTLIFCNAIESVKKLSAMLNILKISSFQIHSSM 401
Query: 521 QQRARLK 527
Q+ RLK
Sbjct: 402 TQKNRLK 408
>gi|71003417|ref|XP_756389.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
gi|46095767|gb|EAK81000.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
Length = 957
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 218/446 (48%), Gaps = 82/446 (18%)
Query: 159 DAEEELVNEAEISTEF-DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA-------- 209
D +++ +EAE + AW+ L LH L +++ FK+PT IQ+ IP A
Sbjct: 224 DLQDDEADEAEFDDKLLPAWSHLALHSDLKRALLHKGFKQPTEIQRKAIPFALGLQQEAT 283
Query: 210 ------------------AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
+ +DV+G ++TGSGKTLA+GLPI+ L E E A
Sbjct: 284 SSDDSEDTADSAAIGAPSTRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIASSCR 343
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG------INV------------ 293
+ + P G ALI+ PTRELALQV+ HL + + I+V
Sbjct: 344 RNAVDDLPPPLG---ALILCPTRELALQVSSHLIDLVRASCIVSDIDVDQPEISHRKLLR 400
Query: 294 --RVVPIVGGMSTEKQERLLKARP---------EVVVGTPGRLWELMSGGEKHLVELHTL 342
++ + GGMS +KQ RLL+ R +++V TPGRLWE+ + +
Sbjct: 401 RPQIAVVCGGMSEQKQRRLLEGRSRQGDRKAGVDIIVATPGRLWEMTRLDDHLAARIKQT 460
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR----- 397
F VLDEADRM+E GHF E++ I++++ + + + Q V+ S + +
Sbjct: 461 RFLVLDEADRMVEVGHFAEMEHILNLVNRSEAKRPSEGQDGQQHVSGSDKEDESEVEIPT 520
Query: 398 ---------QTLVFSATI--ALSADF--RKKLKHGSLK--SKQSVNGLNSIETLSERAGM 442
QT +FSAT+ AL + R+KLK + K SK+ N +++ L +R
Sbjct: 521 HGVKPSSSMQTFIFSATLSKALQVNLKRRRKLKQFAKKRHSKRKENA-TTLDELMDRIDF 579
Query: 443 RANV-AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
R A++DLT L L E+ IEC +DKD Y Y + GRT+VF SI +R
Sbjct: 580 RDQAPAVIDLTPAQGLPQGLMETKIECVGKDKDLY-LYYFLLRYPGRTLVFVNSIDGIRR 638
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLK 527
++ LL L + + +H+Q+QQ+ RLK
Sbjct: 639 LTPLLTQLNVMCYPIHSQLQQKQRLK 664
>gi|303278168|ref|XP_003058377.1| helicase [Micromonas pusilla CCMP1545]
gi|226459537|gb|EEH56832.1| helicase [Micromonas pusilla CCMP1545]
Length = 1131
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/237 (49%), Positives = 142/237 (59%), Gaps = 37/237 (15%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+ AW + LH L++++ L F PTPIQ C+ A DVIGAAETGSGKTLAFG
Sbjct: 329 ADVSAWLQFDLHSKLLRALQELGFTTPTPIQSECLNPAVKGRCDVIGAAETGSGKTLAFG 388
Query: 232 LPIMQRLLEEREKAAKMLED----------------------------KGEEAEKYAPKG 263
LPI+ RLL +R++ A+ D + E + + G
Sbjct: 389 LPILHRLLTQRDEEAEEGSDSESVDGDGDGGGDGDGDDADPDDPFANIEDERGRRGSAAG 448
Query: 264 H--------LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARP 315
LRALI+ PTRELA+QV + LK VAK V VVP+VGGMS +KQERLLK RP
Sbjct: 449 MKLDRRRKALRALIVAPTRELAMQVCEMLKQVAKYSGVDVVPVVGGMSLQKQERLLKRRP 508
Query: 316 EVVVGTPGRLWELM-SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
E+VV TPGRLWELM G +H V+L LSF VLDEADRM+E GHF EL +IID LPM
Sbjct: 509 EIVVATPGRLWELMHQHGHEHFVDLGRLSFLVLDEADRMVERGHFAELANIIDTLPM 565
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK--HG------------------- 419
E+ + +++ Q RQT VFSAT+ + + R+KLK H
Sbjct: 628 ERAREEISLRPSQMLDRQTFVFSATLTVPDNVRRKLKKTHAMAFVGGSGDGGGGGGGGDA 687
Query: 420 -----SLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC-VLANKLEESFIECKEEDK 473
+ + S+ L E V +VDLT+ +A + ES +EC E+++
Sbjct: 688 AAKKKRADAAKGGKDAGSLAALMEAVPFYGRVKLVDLTDQAKTVAKSVVESSLECTEDER 747
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
DA LY+IL+ G IVF +I+ALR + S+LK+L + V LH MQQRARLK +
Sbjct: 748 DALLYHILA-QQPGLVIVFVNAISALRRLVSILKLLKLPVEALHGNMQQRARLKYLDRF 805
>gi|301607357|ref|XP_002933278.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Xenopus
(Silurana) tropicalis]
Length = 817
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 146/263 (55%), Gaps = 22/263 (8%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
L L++TPTRELA+QV H+ VAK +R +VGGM+ +KQ+RLL RPE+V+ TPGR
Sbjct: 362 LLGLVVTPTRELAVQVKHHIDAVAKFTGIRTAIVVGGMAPQKQQRLLDRRPEIVIATPGR 421
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
LWEL+ HL L L V+DEADRM+E GH+ EL + ++L SE
Sbjct: 422 LWELIRERHPHLRNLRQLRCLVIDEADRMVEKGHYAELSQLFELL----------SEVHY 471
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRA 444
N KRQT VFSAT+ L +L K + + + +L E+ GM+
Sbjct: 472 N---------SKRQTFVFSATLTLIHQAPTRLLQKKKYKKIDKD--SKLVSLMEKIGMKD 520
Query: 445 NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
++DLT L E+ I C E+KD YLYY L + GRT+VF SI ++ +SS
Sbjct: 521 KPKVIDLTRKQATVETLTETRIHCATEEKDFYLYYFL-LQYPGRTMVFANSIDCIKRLSS 579
Query: 505 LLKILGIDVWTLHAQMQQRARLK 527
LL IL + +HA M Q+ RLK
Sbjct: 580 LLTILDCNPLPMHANMHQKQRLK 602
>gi|255718883|ref|XP_002555722.1| KLTH0G15840p [Lachancea thermotolerans]
gi|238937106|emb|CAR25285.1| KLTH0G15840p [Lachancea thermotolerans CBS 6340]
Length = 797
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 265/565 (46%), Gaps = 89/565 (15%)
Query: 12 HSKK--TKPNRRKRTRKGGEAEKLD-----SLKWNHSFSAEDNDPFAFLVGSNELDGGFL 64
H+KK KP R+ ++ + E L+ LKW + D F G E+DG +
Sbjct: 29 HTKKRIVKPKRQTQSTRDEEKRNLNVVGANELKWKSVEIPDTMDDFGGFYGLEEIDGVDV 88
Query: 65 SL-----EEIDEASYNLQIPKPEK-----------GKPGKKLNSKKR---------KRSS 99
+ + I N++ P+PE+ G+ ++L K +S
Sbjct: 89 KVVNGKVQFITRNDSNIKGPEPEEPSSQGEVEPSDGQEMEELVEFKNFDDFEEGELSAAS 148
Query: 100 ANEED----SGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESV--AV 153
+N ED S + G + + +G QKQE+ + ++E + +E ++ A
Sbjct: 149 SNGEDNENYSDNELGQEESENAGEQKQEQNHEESEANASGAIMEDNAADGELETNIFGAE 208
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNE-LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
+ PD+ E +L+ + W E + L ++ + F +PT IQ IP A +
Sbjct: 209 LSIPDNVEPDLLPQ---------WTETMNLSMTTLQGLAAQGFTKPTDIQSMTIPPAL-E 258
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
GKD++G A TGSGKTLA+G+PI++RL+ +R + LI TP
Sbjct: 259 GKDIMGKASTGSGKTLAYGIPILERLVADRTTDKTV------------------GLIFTP 300
Query: 273 TRELALQVTDHLKGVA----KGINVRVVPIVGGMSTEKQERLLKAR--PEVVVGTPGRLW 326
TRELA QVT HL+ +A K ++ + GG+S +KQERLLK +VV TPGR
Sbjct: 301 TRELAHQVTQHLQKLACVIIKKSPYAIISLTGGLSIQKQERLLKYDGCARIVVATPGRFL 360
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
E++ K + VLDE DR++++GHF E I+ L G++ +
Sbjct: 361 EMLERDPKLIDRFSQTDCLVLDEVDRLLQDGHFEEFDKILKHL--------GKARNMKKK 412
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK----SKQSVNGLNSIETLSERAGM 442
V S QT+VFSAT S D KL S K K S++ L +
Sbjct: 413 VK-SEFAGTGWQTMVFSAT--FSVDLFNKLSTTSWKKVGGGKDDDEMELSLKHLMTKIHF 469
Query: 443 RANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
R+ I+D + +K++ES IEC ++D + YY L+V+ G T++FC +I +++ +
Sbjct: 470 RSKPVIIDADPDHKIHSKIKESLIECLPTERDLFAYYFLTVY-PGSTLIFCNAIDSVKKL 528
Query: 503 SSLLKILGIDVWTLHAQMQQRARLK 527
++ L L + + +H+ M Q+ RLK
Sbjct: 529 NAYLNFLQVSSFQIHSSMTQKNRLK 553
>gi|328872649|gb|EGG21016.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 909
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 140/221 (63%), Gaps = 18/221 (8%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
++ + EA + + W L PL++K + L ++ PT IQ IPA+ G D+IGAA
Sbjct: 236 QDRIAPEAADTLDMTVWESYNLDPLIIKGLRALGYERPTEIQSQVIPASIQSGNDIIGAA 295
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEA-----------EKYAPKGHLRALI 269
ETGSGKTLAFG+P++ +L K L +GE+ +K L AL+
Sbjct: 296 ETGSGKTLAFGIPMVNTIL-------KYLRAQGEDVTRSTLPQVGLLKKDNSHKKLLALV 348
Query: 270 ITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
+ PTRELA+QVT+HL+ VA ++R++ +VGG+S +KQ+R L ++PE+VV TPGRLWEL+
Sbjct: 349 LCPTRELAIQVTNHLRTVALETSLRIISVVGGLSQKKQDRELNSKPEIVVATPGRLWELI 408
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 370
G+K+L + L F +DEADRM+E G FRE+ SI++ LP
Sbjct: 409 DEGDKYLGDFTNLLCFGIDEADRMVEKGVFREIDSILERLP 449
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
KRQT +FSATI D ++ K K K + L ++TL + ++D T
Sbjct: 567 KRQTFIFSATIVGVHD--EQQKDAKKKKKYANKELTPLQTLISKINFHRKYKLIDCTLKK 624
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+ A+ L+ES I C ++KD YLYY + + G+T+VF S+ +R + ++LK+L + +
Sbjct: 625 LTAHSLKESKILCNLDEKDQYLYYFIDRY-PGKTLVFVNSVDCIRRLLAILKLLKVVAFP 683
Query: 516 LHAQMQQRARLK 527
LHAQM+QR RL+
Sbjct: 684 LHAQMEQRQRLR 695
>gi|348686576|gb|EGZ26391.1| hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae]
Length = 793
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 153/255 (60%), Gaps = 29/255 (11%)
Query: 122 QEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELR 181
+++K ++ + KKKK +G K K EE+V V D + WN+ +
Sbjct: 93 RQQKKQEDASNAPKKKKTRGGKAKK-EEAVEVVPLKD-------------VKLPKWNKFK 138
Query: 182 LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE 241
LHPLLM+S+ F PT IQ+ + A +DV+GAA TGSGKTLAFGLPI+ +LL E
Sbjct: 139 LHPLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGAAPTGSGKTLAFGLPILSQLLHE 198
Query: 242 REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGG 301
RE+ + K ALI+TPTRELA+Q+ HL+ + + + VV +VGG
Sbjct: 199 REQPGYTKDCK--------------ALILTPTRELAIQIQQHLEKMVRNREIGVVTLVGG 244
Query: 302 MSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMIENGHFR 360
M+ +KQ+R+L RPE+V+GTPGRLW+++ +H+ +L TL F V+DEADRM++ G +
Sbjct: 245 MAVQKQKRILSYRPEIVIGTPGRLWDIIEANHEHMKDLATTLRFLVVDEADRMLQPGSYP 304
Query: 361 ELQSIIDMLPMTNGS 375
EL+ I D+L N S
Sbjct: 305 ELEKIFDVLRRKNKS 319
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 34/163 (20%)
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLT- 452
R RQT +FSAT+ + R G K+K+ N L+ +E + +R G+R A+VDL+
Sbjct: 409 RHTRQTFLFSATLMIPEGGR--FHKG--KTKKYRNALSVLERVMKRVGLRGKPAVVDLSI 464
Query: 453 ---------------------------NMCV-LANKLEESFIECKEEDKDAYLYYILSVH 484
N+ + L LE E E +D++LYY L+ +
Sbjct: 465 AEPDMGIPGAKAIISEEDQRKMKKQQDNVALSLPAGLELCQHEVTESTRDSFLYYFLTQY 524
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
GRTI+F +I +R ++SLL +L + V+ LHA+MQQR RLK
Sbjct: 525 -PGRTIIFLNAIHQVRRLTSLLSLLNLPVFALHAEMQQRQRLK 566
>gi|344303044|gb|EGW33318.1| hypothetical protein SPAPADRAFT_50211 [Spathaspora passalidarum
NRRL Y-27907]
Length = 781
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 215/400 (53%), Gaps = 45/400 (11%)
Query: 147 VEESVAVSNGPDDAEEELVNEA-----------EIS-TEFDAWNELRLHPLLMKSIYRLQ 194
VEE+ + PD+ E+EL A EI E+ + + L P + + L
Sbjct: 147 VEETEEIDEKPDELEKELSANAFANLDLPLPDDEIDLPEWQSEDLSSLSPYTLNGLSVLN 206
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
F +PTPIQK IP A +GKDVIG A TGSGKTLA+G+PI+++ L + ++DK
Sbjct: 207 FSKPTPIQKKAIPLAL-EGKDVIGKATTGSGKTLAYGIPILEKYLSSLSTIKQNVKDKIV 265
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK--GINVR-VVPIVGGMSTEKQERLL 311
P G ++ PTRELA QV HL +AK ++ R +V I GG+S +KQERLL
Sbjct: 266 NN----PTG----IVFAPTRELAHQVVSHLNELAKYSPLSTRGIVSITGGLSIQKQERLL 317
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
P ++V TPGR EL+ E+ + + VLDEADR++++GHF E + I+++
Sbjct: 318 AHGPGIIVATPGRFLELLQNDEQLTKRMASTDILVLDEADRLLQDGHFEEFEKILELFGK 377
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL-KHGSLKSK-QSVNG 429
+ NK S+Q K QTLVFSAT S D KL KH K+K S+
Sbjct: 378 SRPKNK-------------SMQW-KWQTLVFSAT--FSRDLFGKLDKHQKNKAKGNSLMD 421
Query: 430 LNSIET-LSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
+ I T L+E+ + + A++D +++ ++ E+ +EC ++D Y Y + +G
Sbjct: 422 NDEIVTLLNEKLKFKDSKPALIDANPKEIVSGQITEALVECGPTERDLY-LYYFLLMYKG 480
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T+VF SI +++ + L L I +++H+ M Q+ RL+
Sbjct: 481 STLVFANSIDSVKRLVPFLNNLNIPAFSIHSSMIQKQRLR 520
>gi|403218070|emb|CCK72562.1| hypothetical protein KNAG_0K01980 [Kazachstania naganishii CBS
8797]
Length = 721
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 193/372 (51%), Gaps = 45/372 (12%)
Query: 165 VNEAEISTEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
VN +E+ E W L ++ + +L + +PT IQ IP A +G D++G A TG
Sbjct: 133 VNFSEVEVELPDWQALGDFSMTTLQGLSKLGYTKPTEIQSKTIPLAL-EGHDIMGKASTG 191
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDH 283
SGKTLA+G+PI++ L++ ++ A + ALI TPTRELA QVT H
Sbjct: 192 SGKTLAYGIPILENLIKGKDSARPV------------------ALIFTPTRELASQVTSH 233
Query: 284 LKGVAKGI-----NVRVVPIVGGMSTEKQERLLK--ARPEVVVGTPGRLWELMSGGEKHL 336
L + + I ++ + GG+S +KQER+LK ++++ TPGR EL+ +
Sbjct: 234 LTNLGESIFTGRNKFAIMSLTGGLSIQKQERVLKYDGSGQIIIATPGRFLELLEKRSDLV 293
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
+ VLDEADR++++GHF E I+ +L +G +R
Sbjct: 294 ARFAQIETLVLDEADRLLQDGHFDEFTKILKLLSQARREKEG--------------KRSH 339
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKS-KQSVNGLNSI-ETLSERAGMRANVAIVDLTNM 454
QTL+FSAT +L F K +G + K+S N L + + L + + I+D
Sbjct: 340 WQTLIFSATFSLDL-FNKLASNGQGHTLKESDNELEEVLKQLMTKIHFKERPTIIDANPF 398
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+ +++E+ IEC ++D Y+YY +S+ G T++FC +I +++ ++S L L I +
Sbjct: 399 DKVNMQVKEALIECAPLERDLYVYYFISMF-PGTTLIFCNAIDSVKKLTSFLNFLRIPSF 457
Query: 515 TLHAQMQQRARL 526
+H+ M Q+ RL
Sbjct: 458 QIHSSMSQKNRL 469
>gi|448512603|ref|XP_003866769.1| Mak5 nucleolar DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
gi|380351107|emb|CCG21330.1| Mak5 nucleolar DEAD-box RNA helicase [Candida orthopsilosis Co
90-125]
Length = 800
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 42/368 (11%)
Query: 177 WNE----LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
W+E + L P + + L F PTPIQK IP A +GKDV+G A TGSGKTLA+G+
Sbjct: 177 WSERELGVSLSPYTLNGLAILNFTTPTPIQKRTIPIAL-EGKDVVGKATTGSGKTLAYGI 235
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK--G 290
PI+++ L+ ++ + +++K H +I TPTRELA QV DHL +A+
Sbjct: 236 PILEKYLQSLDQVKQNVKEKK--------INHPNGVIFTPTRELAHQVVDHLNKLAQYSP 287
Query: 291 INVR-VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
++V+ +V + GG++ +KQ+RLLK P ++V TPGR EL + + VLDE
Sbjct: 288 LSVKGIVSVTGGLAIQKQQRLLKMGPGIIVATPGRFLELCENDPELAKRMSLTDIVVLDE 347
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-- 407
ADR++++GHF E + I+++ NK + K QTLVFSAT +
Sbjct: 348 ADRLLQDGHFEEFEKILELFGKNRPKNKNIAW--------------KWQTLVFSATFSRD 393
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNS-------IETLSERAGMRANVAI-VDLTNMCVLAN 459
L K+ K KQ ++G NS IE L+E+ + I +D +++
Sbjct: 394 LFGKLDKQQKPKIKNQKQQIDG-NSLVQNDEIIELLNEKLNFKDKKPILIDANPKEIVSG 452
Query: 460 KLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
++ E+ +EC ++D YLYY + +G T+VF SI +++ + LL+ L I + +H+
Sbjct: 453 QITEALVECGATERDLYLYY-FLLMYKGSTLVFANSIDSVKRLVPLLENLKIPAFAIHSS 511
Query: 520 MQQRARLK 527
M+Q+ RL+
Sbjct: 512 MEQKQRLR 519
>gi|167385322|ref|XP_001737297.1| ATP-dependent RNA helicase mak5 [Entamoeba dispar SAW760]
gi|165899942|gb|EDR26421.1| ATP-dependent RNA helicase mak5, putative [Entamoeba dispar SAW760]
Length = 586
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 195/366 (53%), Gaps = 53/366 (14%)
Query: 165 VNEAEISTEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
+++ + E W +L +L +++++Y L F PT IQ+ I A KDV+G+A TG
Sbjct: 37 IDDNLLVIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDVVGSAPTG 96
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDH 283
SGKTL+F +PI+QRL+E DK + + +II PTRELA+Q+ +H
Sbjct: 97 SGKTLSFLIPIVQRLIE---------LDKIDSTQ---------CVIIVPTRELAVQINEH 138
Query: 284 LKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-LHT 341
K + K + IVGGM+ KQ RLL P +V+GTPGRL+EL S E ++++ L
Sbjct: 139 FKKLIKYLPQFTSSVIVGGMAIPKQVRLLSQEPTIVIGTPGRLYELYSETEHNVLQTLPE 198
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ F VLDEADR++E GHF EL ++D+ K++QT V
Sbjct: 199 IPFIVLDEADRLLEKGHFIELTKLLDV-----------------------FNNKEKQTFV 235
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT+ L+++ K K S NG + + + ++ M + ++D++ ++
Sbjct: 236 FSATMILASEMMAK--------KYSSNGEDELTRMLQKLKMN-DTELIDVSTPQQTVEQM 286
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
EE + +D L+YIL+ G+T+VF +I ++ + L +++G V +L++ M+
Sbjct: 287 EEKKVVVPSLVRDEALFYILTYMKPGKTLVFVNAITMIKRLVPLFQMIGCSVCSLYSGME 346
Query: 522 QRARLK 527
RL+
Sbjct: 347 MSQRLR 352
>gi|146412600|ref|XP_001482271.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
gi|152032567|sp|A5DPU0.1|MAK5_PICGU RecName: Full=ATP-dependent RNA helicase MAK5
gi|146393035|gb|EDK41193.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 184/339 (54%), Gaps = 36/339 (10%)
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
FKEPT IQ+ IP A QGKDVIG A TGSGKTLA+G+PI++R L + E ++
Sbjct: 204 FKEPTAIQRKAIPLAL-QGKDVIGKATTGSGKTLAYGIPILERCLAQLESKTNTIKPPT- 261
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR---VVPIVGGMSTEKQERLL 311
A+I PTRELA QV DH+ +AK + +V I GG+S +KQERLL
Sbjct: 262 ------------AMIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQKQERLL 309
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
P ++V TPGR ELM + + VLDEADR++++GHF E + I+DML
Sbjct: 310 SHGPSILVATPGRCLELMEKSVDLVNRMALTDMIVLDEADRLLQDGHFEEFEKILDML-- 367
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS--VNG 429
NK + ++TQ ++ QTLVFSAT S D KL + ++K+S +
Sbjct: 368 ----NKHRPKKTQGV-------SRRWQTLVFSAT--FSRDLFGKLSNNKPRNKESSFIEN 414
Query: 430 LNSIETLSERAGMRANV-AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR 488
+ L+ + R A++D +++ K+ E+ +EC ++D Y Y + G
Sbjct: 415 DEILSLLNTKLQFRDRTPAVIDANPKEIVSGKVTEALVECGPSERDLY-LYYFLLMYPGS 473
Query: 489 TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
T+VF +I +++ + L L I +++H+ M Q+ RL+
Sbjct: 474 TLVFANAIDSVKRLVPFLTNLNIPTFSIHSSMIQKQRLR 512
>gi|255724828|ref|XP_002547343.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
gi|240135234|gb|EER34788.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
Length = 711
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 198/349 (56%), Gaps = 37/349 (10%)
Query: 187 MKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
+ + +L F++PTPIQK IP A QGKDVIG A TGSGKTLA+G+PI+++ ++
Sbjct: 129 LNGLSQLGFQKPTPIQKETIPIAL-QGKDVIGKATTGSGKTLAYGIPILEKYIQSLNTIK 187
Query: 247 KMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK--GINVR-VVPIVGGMS 303
+ +DK H +I PTRELA QV +HL +AK ++ R +V I GG+S
Sbjct: 188 QNNKDK--------KINHPTGIIFAPTRELAHQVVEHLNALAKYSPLSTRGIVSITGGLS 239
Query: 304 TEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 363
+KQ+RLLK P ++V TPGRL EL+ G + L + VLDEADR++++GHF E +
Sbjct: 240 IQKQQRLLKHGPGIIVATPGRLLELIQGDLELCKRLASTDIIVLDEADRLLQDGHFEEFE 299
Query: 364 SIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS----ADFRKKLKHG 419
I+++ G N+ +++ T+ K QTLVFSAT + D R+K K
Sbjct: 300 KILELF----GKNRPRNKSTE----------WKWQTLVFSATFSRDLFGKLDKRQKGKTS 345
Query: 420 SLKSKQSVNGLNSIETLSERAGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLY 478
SL V ++ L+++ + A+VD +++ ++ E+ +EC ++D YLY
Sbjct: 346 SLMHNDEV-----VKLLNDKLKFKDKKPAMVDANPKEIVSGQITEALVECGPTERDLYLY 400
Query: 479 YILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
Y + +G T+VF SI +++ + L L I +++H+ M Q+ RL+
Sbjct: 401 Y-FLLMYKGSTLVFANSIDSVKRLVPFLNNLNIPAFSIHSSMIQKQRLR 448
>gi|406602865|emb|CCH45589.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 775
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 192/363 (52%), Gaps = 49/363 (13%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW+ L L ++ + L F +PTPIQK CIP + +G D+IG A TGSGKTLA+G+
Sbjct: 202 DLPAWSNLDLSTYTLQGLSHLNFTKPTPIQKKCIPICS-EGNDIIGKASTGSGKTLAYGI 260
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI- 291
PI++RL+ ++ P G +I TPTRELA QV DHL ++K
Sbjct: 261 PILERLVSLKDPKF--------------PAG----VIFTPTRELAHQVVDHLNKISKFFP 302
Query: 292 --NVRVVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
++ + GG+S +KQER+LK +++V TPGR EL+ + ++ L VL
Sbjct: 303 SHQSSILSLTGGLSIQKQERILKYENSGQIIVATPGRFLELIERNGEFAKKVSNLEILVL 362
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADR++++GHF E + I+ +L + + ++ K Q+LVFSAT A
Sbjct: 363 DEADRLLQDGHFDEFEQILKIL------------------STNRTKQDKWQSLVFSATFA 404
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNS----IETLSERAGMRANVAIVDLTNMCVLANKLEE 463
+ + KL H K K + L+ I+ L+E+ +DL LAN++ E
Sbjct: 405 V--ELFSKLVHQGYKPKDEPSKLDEREQIIKILNEKIKFSKKPEFIDLNPNQKLANEITE 462
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
+ +EC ++D YLYY + G T+VF +I +++ + L L I + +H+ M Q+
Sbjct: 463 TMVECLPAERDLYLYY-FLLMYPGTTLVFTNAIDSVKRLVPYLNNLKIPTFAIHSSMLQK 521
Query: 524 ARL 526
RL
Sbjct: 522 QRL 524
>gi|323507773|emb|CBQ67644.1| related to MAK5-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 946
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 212/442 (47%), Gaps = 85/442 (19%)
Query: 173 EFD-----AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA------------------ 209
EFD AW+ L LH L +++ FK+PT IQ IP A
Sbjct: 235 EFDHKLLPAWSHLPLHAALKRALAHKGFKKPTEIQNRSIPLALGLQQEAASSDDSDDAAA 294
Query: 210 ------AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG 263
+ + +DV+G ++TGSGKTLA+GLPI+ L E E A + P G
Sbjct: 295 ANSSSSSRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIASFSRPSTTDDVPPPLG 354
Query: 264 HLRALIITPTRELALQVTDHLKGVAKGINV--------------------RVVPIVGGMS 303
ALI+ PTRELALQV+ HL + + + ++ + GGMS
Sbjct: 355 ---ALILCPTRELALQVSSHLTEIVRASCLVSSTTGDEDEISHKKLLRRPQIAVVCGGMS 411
Query: 304 TEKQERLLKARP---------EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+KQ RLL R +++V TPGRLWE+ + + F VLDEADRM+
Sbjct: 412 EQKQRRLLDGRSRQGDRKAGVDIIVATPGRLWEMTRLDDNLAARIKQTRFLVLDEADRMV 471
Query: 355 ENGHFRELQSIIDMLPMTNG-------------SNKGQSEQTQNCVTVSSLQRKKRQTLV 401
E GHF E++ I++++ + G + +SE + V S+ QT V
Sbjct: 472 EVGHFAEMEHILNLVNRSEGRRPSEGKDGQLPQDDDDESEVETHGVKPSA----NMQTFV 527
Query: 402 FSATI--ALSADFRKKLKHGSLKSKQSVN---GLNSIETLSERAGMRANV-AIVDLTNMC 455
FSAT+ AL + +++ K K+ +++ L +R R + A++DLT
Sbjct: 528 FSATLSKALQINLKRRRKQKQFTKKRHSKRKENATTLDELMDRVDFRDDSPAVIDLTPGQ 587
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L L E+ IEC +DKD YLYY L GR++VF SI A+R ++ +L L + +
Sbjct: 588 GLPEGLMETKIECVGKDKDLYLYYFLLR-YPGRSLVFVNSIDAIRRLTPILAQLQVTCYP 646
Query: 516 LHAQMQQRARLKLFSQMITWIR 537
+H+Q+QQ+ RLK + T+ R
Sbjct: 647 IHSQLQQKQRLKNLDRFRTFNR 668
>gi|301103398|ref|XP_002900785.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262101540|gb|EEY59592.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 763
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 160/277 (57%), Gaps = 35/277 (12%)
Query: 104 DSGDGDGDGDEDGSGVQKQEEKNLKNET----GKKKKKKKKGKKIKTVEESVAVSNGPDD 159
D D +G +DG + +E + + E GK + K KK + + E VA+ +
Sbjct: 53 DIQDMQLEGFQDGCAFELEELTDYRVENTEDGGKMLNRGGKAKKEQELVEIVALKD---- 108
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
VN WN+ +LHPLLM+S+ F PT IQ+ + A +DV+GA
Sbjct: 109 -----VN-------LPKWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGA 156
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
A TGSGKTLAFGLPI+ +LL ERE+ + + K ALI+TPTRELA+Q
Sbjct: 157 APTGSGKTLAFGLPILSQLLHEREQPGYIKDCK--------------ALILTPTRELAIQ 202
Query: 280 VTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
+ HL+ + + + VV +VGGM+ +KQ+R+L RPE+V+GTPGRLW+++ +H+ +L
Sbjct: 203 IQQHLEKMVRNREIGVVTLVGGMAVQKQKRILTYRPEIVIGTPGRLWDIIETNHEHMQDL 262
Query: 340 HT-LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
T L F V+DEADRM++ G + EL+ I ++L N S
Sbjct: 263 ATSLRFLVVDEADRMLQPGSYSELEKIFEVLRRKNKS 299
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 38/165 (23%)
Query: 394 RKKRQTLVFSATIAL--SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL 451
R RQT +FSAT+ + F+K K+K+ N L+ +E + +R G+R A+VDL
Sbjct: 379 RHVRQTFLFSATLTIPEGGRFQKT------KTKKYRNALSVLERVMKRVGLRGKPAVVDL 432
Query: 452 T----------------------------NMCV-LANKLEESFIECKEEDKDAYLYYILS 482
+ N+ + L LE E E +D++LY+ L+
Sbjct: 433 SIAESDIGIPGAKPLMSEEAERKLKKQQQNVALSLPAGLELCQHEVTESTRDSFLYFFLT 492
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ GRTI+F +I +R +S LL +L + V+ LHA+MQQR RLK
Sbjct: 493 QY-PGRTIIFLNAIHQVRKLSGLLTLLNLPVFALHAEMQQRQRLK 536
>gi|254578440|ref|XP_002495206.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
gi|238938096|emb|CAR26273.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
Length = 751
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 202/382 (52%), Gaps = 51/382 (13%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPL---LMKSIYRLQFKEPTPIQKACIPAAAHQG 213
P+ EL E S E W ++ PL ++ + + F +PT IQK +P A +
Sbjct: 166 PNVFNSELNLEDFSSPELPEWQ--KIAPLSFTVLNGLSQQGFTKPTDIQKEVLPLAL-KN 222
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
+D++G A TGSGKTLA+G+P+++ L+ E + + + LI TPT
Sbjct: 223 EDIMGKAATGSGKTLAYGIPLLESLVHEPDHSKSI------------------GLIFTPT 264
Query: 274 RELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLKAR--PEVVVGTPGRLWE 327
RELA QVT HLK + + I ++P+ GG+S +KQER+LK +VV TPGR E
Sbjct: 265 RELAQQVTQHLKKLGQLIIQKSKFAILPLTGGLSIQKQERILKYENSARIVVATPGRFLE 324
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
L+ + ++ VLDEADR++++GHF E + I+ +L G+ K
Sbjct: 325 LIEKNIDLIPRFARINTLVLDEADRLLQDGHFDEFEKILKLL---GGARK---------- 371
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS-KQSVNGLNSI-ETLSERAGMRAN 445
S + QT++FSAT +LS KL S KS K+ + + + + L ++ ++
Sbjct: 372 ---SFDKTGWQTMIFSATFSLS--LFSKLATASWKSLKKDEDEMEQVLKHLMQKIRFKSK 426
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
IVD + + +++ ES IEC ++D Y YY L+++ G T++FC SI +++ + +
Sbjct: 427 PVIVDTNSEEKIKSQIRESLIECGPMERDLYSYYFLAMY-PGTTLIFCNSIDSVKKLCAY 485
Query: 506 LKILGIDVWTLHAQMQQRARLK 527
L ID + +H+ M Q+ RL+
Sbjct: 486 FNNLKIDAFQIHSSMTQKNRLR 507
>gi|407041314|gb|EKE40660.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 600
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 195/366 (53%), Gaps = 53/366 (14%)
Query: 165 VNEAEISTEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
+++ + E W +L +L +++++Y L F PT IQ+ I A KD++G+A TG
Sbjct: 51 IDDNLLMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTG 110
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDH 283
SGKTL+F +PI+QRL+E DK + + +II PTRELA+Q+ +H
Sbjct: 111 SGKTLSFLIPIVQRLIE---------LDKTDSTQ---------CVIIVPTRELAVQINEH 152
Query: 284 LKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-LHT 341
K + K + + IVGGM+ KQ RLL P +V+GTPGRL+EL S E ++++ L
Sbjct: 153 FKKLIKYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRLYELYSETEHNVLQTLPE 212
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ F VLDEADR++E GHF + ++D+ K++QT V
Sbjct: 213 IPFIVLDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFV 249
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT+ L+++ K K S NG + + + ++ + + ++D++ ++
Sbjct: 250 FSATMILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDVSTPQQTVEQM 300
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
EE + +D L+YIL+ G+T+VF +I ++ + L +++G V +L++ M+
Sbjct: 301 EEKKVVVPSLVRDEALFYILTYMKPGKTLVFVNAITMIKRLVPLFQMIGCSVCSLYSGME 360
Query: 522 QRARLK 527
RL+
Sbjct: 361 MSQRLR 366
>gi|449705204|gb|EMD45301.1| ATP-dependent RNA helicase mak5, putative [Entamoeba histolytica
KU27]
Length = 600
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 192/361 (53%), Gaps = 53/361 (14%)
Query: 170 ISTEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
+ E W +L +L +++++Y L F PT IQ+ I A KD++G+A TGSGKTL
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTL 115
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
+F +PI+QRL+E DK + + +II PTRELA+Q+ +H K +
Sbjct: 116 SFLIPIVQRLIE---------LDKTDSTQ---------CVIIVPTRELAVQINEHFKKLI 157
Query: 289 KGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-LHTLSFFV 346
K + + IVGGM+ KQ RLL P +V+GTPGR++EL S E ++++ L + F V
Sbjct: 158 KYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRIYELYSETEHNVLQTLPEIPFIV 217
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
LDEADR++E GHF + ++D+ K++QT VFSAT+
Sbjct: 218 LDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSATM 254
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
L+++ K K S NG + + + ++ + + ++D++ ++EE +
Sbjct: 255 ILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDISTPQQTVEQIEEKKV 305
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+D L+YIL+ G+T+VF +I ++ + L +++G V +L++ M+ RL
Sbjct: 306 VVPSLVRDEALFYILTYMKPGKTLVFVNAITMIKRLVPLFQMIGCSVCSLYSGMEMSQRL 365
Query: 527 K 527
+
Sbjct: 366 R 366
>gi|67463088|ref|XP_648201.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56464242|gb|EAL42815.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 600
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 192/361 (53%), Gaps = 53/361 (14%)
Query: 170 ISTEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
+ E W +L +L +++++Y L F PT IQ+ I A KD++G+A TGSGKTL
Sbjct: 56 LMIEMKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTL 115
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
+F +PI+QRL+E DK + + +II PTRELA+Q+ +H K +
Sbjct: 116 SFLIPIVQRLIE---------LDKTDSTQ---------CVIIVPTRELAVQINEHFKKLI 157
Query: 289 KGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-LHTLSFFV 346
K + + IVGGM+ KQ RLL P +V+GTPGR++EL S E ++++ L + F V
Sbjct: 158 KYLPQFTSLVIVGGMAIPKQVRLLSQEPTIVIGTPGRIYELYSETEHNVLQTLPEIPFIV 217
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
LDEADR++E GHF + ++D+ K++QT VFSAT+
Sbjct: 218 LDEADRLLEKGHFVDFTKLLDI-----------------------FNNKEKQTFVFSATM 254
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
L+++ K K S NG + + + ++ + + ++D++ ++EE +
Sbjct: 255 ILASEMMAK--------KYSSNGEDELTRMLQKLKLN-DAELIDISTPQQTVEQMEEKKV 305
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+D L+YIL+ G+T+VF +I ++ + L +++G V +L++ M+ RL
Sbjct: 306 VVPSLVRDEALFYILTYMKPGKTLVFVNAITMIKRLVPLFQMIGCSVCSLYSGMEMSQRL 365
Query: 527 K 527
+
Sbjct: 366 R 366
>gi|363753372|ref|XP_003646902.1| hypothetical protein Ecym_5326 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890538|gb|AET40085.1| hypothetical protein Ecym_5326 [Eremothecium cymbalariae
DBVPG#7215]
Length = 757
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 192/366 (52%), Gaps = 50/366 (13%)
Query: 173 EFDAW-NELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
E AW N+++L ++++ +L F PT IQ IP A +G D++G A TGSGKTLA+G
Sbjct: 187 ELPAWSNKMKLSFFTLQALAKLGFTSPTEIQVQSIPKAL-EGLDIMGKASTGSGKTLAYG 245
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV---- 287
+PI++RL DK AL+ TPTRELA QVT HL+ V
Sbjct: 246 IPILERLFASTN-------DKP------------IALVFTPTRELAHQVTTHLQNVLGNL 286
Query: 288 AKGINVRVVPIVGGMSTEKQERLL--KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
K + ++ + GG+S +KQERLL + +VV TPGR EL+ E + +
Sbjct: 287 VKKMPYAILSLTGGLSIQKQERLLDYEGSSRIVVATPGRFLELLEKNEDLIKRFAEIGVL 346
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
VLDEADR++++GHF E + I L N+ Q +L+ +K QT++ SAT
Sbjct: 347 VLDEADRLLQDGHFDEFEKIFKHL------NREQ----------KTLKSEKWQTMILSAT 390
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIET----LSERAGMRANVAIVDLTNMCVLANKL 461
S D KL K+ ++ N +E L + ++ I+D + ++
Sbjct: 391 --FSIDLFSKLSTTHWKNLKNNKENNEMEAVLKHLMTKISFKSKPVIIDTNPESKITAQV 448
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ES IEC ++D Y+YY L+++ T+VFC +I +++ +++ L L I + +H+ M
Sbjct: 449 KESLIECGPTERDLYVYYFLTLY-PATTLVFCNAIDSVKKLTAYLNNLKISAFQIHSSML 507
Query: 522 QRARLK 527
Q+ RLK
Sbjct: 508 QKNRLK 513
>gi|388852351|emb|CCF53966.1| related to MAK5-ATP-dependent RNA helicase [Ustilago hordei]
Length = 969
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 218/460 (47%), Gaps = 90/460 (19%)
Query: 173 EFD-----AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA------------------ 209
EFD AW+ L LHP L +++ F +PT IQ +P A
Sbjct: 240 EFDDQLLPAWSHLPLHPALKRALAHKGFTKPTEIQDRSLPFALGLQSQQEAESSIDDSHE 299
Query: 210 ----------AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKY 259
+ + +DV+G ++TGSGKTLA+GL I+ L E E A + E+
Sbjct: 300 DAKQATATSSSQKKRDVVGVSQTGSGKTLAYGLAILNHLFENAENAIASSSSRRNALEQV 359
Query: 260 APKGHLRALIITPTRELALQVTDHLKGVAKGINV---------------------RVVPI 298
P L ALI+ PTRELALQV+ HL + + + ++ +
Sbjct: 360 PPP--LGALILCPTRELALQVSSHLTEIVRASCIISADDDDDQAEISHKKLLGRPQIAVV 417
Query: 299 VGGMSTEKQERLLKARP---------EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
GGMS +KQ RLL+ R ++++ TPGRLWE+ + + F VLDE
Sbjct: 418 CGGMSEQKQRRLLQGRSRASDRQSGVDIIIATPGRLWEMTRLDDHLAARIKQTRFLVLDE 477
Query: 350 ADRMIENGHFRELQSIIDM---------LPMTNGSNKGQSEQTQNCVTVSSLQRKK---- 396
ADRM++ GHF E++ I+++ +P +G + + +Q +
Sbjct: 478 ADRMVQVGHFAEMEHILNLVNRTEARHPVPGKDGQQHQPHHHQSDSESEREVQTHRVKPS 537
Query: 397 --RQTLVFSATIALSADF----RKKLKHGSLK--SKQSVNGLNSIETLSERAGMR-ANVA 447
QT +FSAT++ + R+KLK + K K++ N +++ L R R A
Sbjct: 538 CNMQTFIFSATLSKTLQINLKKRRKLKQLTKKRHCKRNANS-TTLDELVSRIDFRDPTPA 596
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
++DLT + L ++ +EC +DKD YLYY L GR++VF SI A+R ++ LL
Sbjct: 597 VIDLTRAQGMPQGLMQTKLECVRKDKDLYLYYFLLR-YPGRSLVFVNSIDAIRRLTPLLG 655
Query: 508 ILGIDVWTLHAQMQQRARLKLFSQMITW-IRKRPKGDRGK 546
LGI + +H+Q+QQ+ RL + ++ + P +GK
Sbjct: 656 ELGIRSYPIHSQLQQKQRLNNLDRFSSFSLHSTPHSAKGK 695
>gi|410081467|ref|XP_003958313.1| hypothetical protein KAFR_0G01440 [Kazachstania africana CBS 2517]
gi|372464901|emb|CCF59178.1| hypothetical protein KAFR_0G01440 [Kazachstania africana CBS 2517]
Length = 719
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 197/370 (53%), Gaps = 51/370 (13%)
Query: 172 TEFDAWNEL-RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
E W +L + ++ + +L F +PT IQ IP D++G A TGSGKTLA+
Sbjct: 131 VELPEWTKLAKFSMTTLQGLAKLGFTKPTEIQAKTIPLGL-GNHDIMGKASTGSGKTLAY 189
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA--LIITPTRELALQVTDHLKGVA 288
G+P+++ ++ + K + RA LI TPTRELA QVT HL V+
Sbjct: 190 GIPMLENFVKS-----------------FKSKDNNRAIGLIFTPTRELAQQVTQHLTKVS 232
Query: 289 KGI-----NVRVVPIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVELHT 341
+ I ++ + GG+S +KQERLLK + ++V+ TPGR EL+ + +
Sbjct: 233 ELILKEKNKYAILSLTGGLSIQKQERLLKYQGSGKIVIATPGRFLELLEKNNELIERFGK 292
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ VLDEADR++++GHF E + I+ +L G+ + +S ++ QT++
Sbjct: 293 IDTLVLDEADRLLQDGHFDEFEKILKLL----GNYRKKSSKSH------------WQTMI 336
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIET----LSERAGMRANVAIVDLTNMCVL 457
FSAT S D KL +K +G N +ET L + ++ IVD +
Sbjct: 337 FSAT--FSTDLFNKLASNHNHNKNKNDGENEMETVLKHLMTKIHFKSKPVIVDTNPDEKV 394
Query: 458 ANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
+++++ES IEC ++D Y+YY L+++ G T+VFC +I +++ +++ L +L I + +H
Sbjct: 395 SSQIKESLIECAPMERDLYVYYFLAMY-PGTTLVFCNAIESVKRLNAYLNLLNISSFQIH 453
Query: 518 AQMQQRARLK 527
+ M Q+ RLK
Sbjct: 454 SSMTQKNRLK 463
>gi|449665189|ref|XP_004206086.1| PREDICTED: ATP-dependent RNA helicase DDX24-like, partial [Hydra
magnipapillata]
Length = 403
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 153/268 (57%), Gaps = 31/268 (11%)
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
L ALI+TPTRELA+Q+ +HL +AK ++ +VGG++ KQERLL PE+V+GTPGR
Sbjct: 23 LFALILTPTRELAIQIQNHLNCIAKYTDLSCFAVVGGLAQPKQERLLSKFPEIVIGTPGR 82
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
L++L+ G+ HL + ++ F V+DE DRM+E GHF+EL+ ++
Sbjct: 83 LYKLIKDGDPHLNKFESIKFLVIDECDRMLEFGHFKELEELM------------------ 124
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRA 444
C+ SS R RQT VFSAT+ L +KH K N + ++ L ++ G+
Sbjct: 125 -CIINSSQNR--RQTFVFSATLTLP------VKHKIYSKK---NEVTQMQQLVDKIGLNH 172
Query: 445 NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
++DLT V A+ L + + C ++K+ YL Y L H GRTIVF SI+ + +SS
Sbjct: 173 KAKVIDLTTKQVTASLLRQIKVICMNDEKEIYLTYFLMSHP-GRTIVFVNSISLTKRLSS 231
Query: 505 LLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L ++ LHA QQ+ RLK +
Sbjct: 232 LFTLLRLEPIVLHAGKQQKQRLKCLERF 259
>gi|255079576|ref|XP_002503368.1| helicase [Micromonas sp. RCC299]
gi|226518634|gb|ACO64626.1| helicase [Micromonas sp. RCC299]
Length = 1160
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/245 (47%), Positives = 140/245 (57%), Gaps = 52/245 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + LHP L++++ L F +PTPIQ C+ A DVIGAAETGSGKTLAFGLPI+
Sbjct: 352 WLQFDLHPKLLRALQDLGFSDPTPIQTECLNPAIKGRCDVIGAAETGSGKTLAFGLPILH 411
Query: 237 RLL-----------------EEREKA-----------------------------AKMLE 250
R+L E+RE+ A +L+
Sbjct: 412 RILTQRDEEADESASESEDAEQRERGGDGGGGGGAEGGAEGGAEGGADAEGDDPFALVLD 471
Query: 251 DKGEEAEKYAPK-----GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
G K LRALI+ PTRELA+QV D LK VAK +V VVP+VGGMS +
Sbjct: 472 GSGRAGADAGMKLDRKRRALRALILAPTRELAMQVCDMLKAVAKHTDVDVVPVVGGMSLQ 531
Query: 306 KQERLLKARPEVVVGTPGRLWELM-SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
KQERLL+ RPEVVV TPGRLWELM G +H V+L L+F VLDEADRM+E GHFREL
Sbjct: 532 KQERLLRRRPEVVVATPGRLWELMHQQGHEHFVDLGRLNFLVLDEADRMVERGHFRELSD 591
Query: 365 IIDML 369
II+ L
Sbjct: 592 IIETL 596
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS-------KQSVNGLN--SIETL 436
V + Q RQT VFSAT+ + + R+KLK ++ K++ +G + ++ +L
Sbjct: 664 AVNLRPSQMLDRQTFVFSATLTVPDNVRRKLKKRQAQAFVSGEDKKKAASGASAGTLASL 723
Query: 437 SERAGMRANVAIVDLTNMC-VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTS 495
E V +VDLT+ +A + ES +EC E+++DA LY+ILS G IVF +
Sbjct: 724 MEAVPFYGRVKLVDLTDQSQTVAKGVTESSLECTEDERDALLYHILS-QEPGLVIVFVNA 782
Query: 496 IAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
I+ALR + ++LK L + V LH MQQRARLK +
Sbjct: 783 ISALRRLLAILKTLRLPVEGLHGNMQQRARLKYLDRF 819
>gi|344232121|gb|EGV64000.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 809
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 190/360 (52%), Gaps = 39/360 (10%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L + + L+F PTPIQK IP +G+D+IG A TGSGKTLA+G+PI++
Sbjct: 169 WSSLSLSGYALTGLNELKFTSPTPIQKKSIPLGL-EGRDIIGKATTGSGKTLAYGIPILE 227
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR-- 294
+ L E ++ + +P G ++ PTRELA QV DHL ++K +
Sbjct: 228 KYLSNLE----TIKANRKNGIINSPTG----IVFVPTRELAHQVVDHLNNISKFYPLPPN 279
Query: 295 -VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+V I GG+S +KQERLLK P ++V TPGR EL E+ L + VLDEADR+
Sbjct: 280 GIVSITGGLSIQKQERLLKFGPGLIVATPGRFLELSEKDEELLKRWSSTDIVVLDEADRL 339
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA------ 407
+++GHF E + I+++ N L K QTLVFSAT A
Sbjct: 340 LQDGHFDEFEKILELFKKHRPGN---------------LATWKWQTLVFSATFARELFGK 384
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
LS + K + G +++ + + LN +++ + ++D +++ ++ E+ +E
Sbjct: 385 LSKTVKAKDQTGLIENDEILKLLNEKLHFKDKSPV-----LIDANPKEIVSGQIAEALVE 439
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
C ++D YLYY + +G T+VF SI +++ + L L I + +H+ M Q+ R++
Sbjct: 440 CGATERDLYLYY-FLLVYKGSTLVFANSIDSVKRLVPFLNSLNIPAFAIHSSMIQKQRMR 498
>gi|150951560|ref|XP_001387897.2| ATP-dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|284018096|sp|A3GG51.2|MAK5_PICST RecName: Full=ATP-dependent RNA helicase MAK5
gi|149388695|gb|EAZ63874.2| ATP-dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 836
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 195/391 (49%), Gaps = 52/391 (13%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
PDD + L + + F L P + + L F +PTPIQK IP AA +GKDV
Sbjct: 210 PDDEDINLPHWQNEDSNFS------LSPYTLHGLSVLGFDKPTPIQKKTIPLAA-EGKDV 262
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEE-----REKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
+G A TGSGKTLA+G+PI+++ L + + K++ H +I
Sbjct: 263 VGKAITGSGKTLAYGIPILEKYLSNLSIINQNRQKKII-------------NHPTGIIFA 309
Query: 272 PTRELALQVTDHLKGVAKGINVR---VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
PTRELA QV HL +AK + +V I GG+S +KQERLL P ++V TPGR+ EL
Sbjct: 310 PTRELAHQVVSHLNSLAKYSPLSTNGIVSITGGLSIQKQERLLSHGPGIIVATPGRILEL 369
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ E L + VLDEADR++++GHF E ++I+D+ NK
Sbjct: 370 LQKDEDLTKRLASTDIIVLDEADRLLQDGHFEEFETILDLFRKNRPKNKTFPW------- 422
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI------ETLSERAGM 442
K QTLVFSAT S D KL K++ G + I L+++
Sbjct: 423 -------KWQTLVFSAT--FSRDLFGKLDKNQKSHKRNSEGSSLIGNDEILNLLNDKLKF 473
Query: 443 R-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
+ A+VD +++ + E+ +EC ++D YLYY + +G T+VF SI +++
Sbjct: 474 KDTRPALVDANPKEIVSGNITEALVECGPTERDLYLYY-FLLMYKGSTLVFANSIDSVKR 532
Query: 502 ISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+ L L I + +H+ M Q+ RL+ +
Sbjct: 533 LVPFLNNLNIPAFAIHSSMIQKQRLRALERF 563
>gi|50418781|ref|XP_457911.1| DEHA2C05170p [Debaryomyces hansenii CBS767]
gi|74659437|sp|Q6BV58.1|MAK5_DEBHA RecName: Full=ATP-dependent RNA helicase MAK5
gi|49653577|emb|CAG85962.1| DEHA2C05170p [Debaryomyces hansenii CBS767]
Length = 790
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 204/384 (53%), Gaps = 48/384 (12%)
Query: 164 LVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
L ++ E++ + W++L L + + L++++PT IQK IP A +GKDVIG A TG
Sbjct: 190 LPDDNEVNLPY--WDDLSLSSFTLNGLSALEYEKPTAIQKRTIPLAI-EGKDVIGKAITG 246
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKY--APKGHLRALIITPTRELALQVT 281
SGKTLA+G+PI++R L++ KA +++K P G +I PTRELA QV
Sbjct: 247 SGKTLAYGIPILERHLQKMAKA--------NQSKKVINPPTG----IIFAPTRELAHQVV 294
Query: 282 DHLKGVAKGINVR---VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
DHL +AK + +V I GG+S +KQERLL P +VV TPGR EL+ +
Sbjct: 295 DHLNRIAKFTPLSQHGIVSITGGLSIQKQERLLSHGPGIVVATPGRFLELLQKDMALVQR 354
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L VLDEADR++++GHF E I+++ + + E K Q
Sbjct: 355 LSCTDIVVLDEADRLLQDGHFDEFVKILELFGKHRPRDNKELEW-------------KWQ 401
Query: 399 TLVFSATIALSADFRKKL-KHGSLKSKQSVNGLNS--------IETLSERAGMR-ANVAI 448
TLVFSAT S D KL KH LKS ++ + S ++ L+++ + + +
Sbjct: 402 TLVFSAT--FSRDLFGKLDKH--LKSNKNKEEMGSSLIDNDEILQLLNDKLKFKDSKPTL 457
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
VD ++A ++ E+ +EC ++D Y Y + G T+VF SI +++ ++ L
Sbjct: 458 VDANPKEMVAGQITEALVECGPTERDLY-LYYFLLLYPGSTLVFANSIDSVKRLAPFLNN 516
Query: 509 LGIDVWTLHAQMQQRARLKLFSQM 532
L + +++H+ M Q+ RL+ +
Sbjct: 517 LKVPTFSIHSSMIQKQRLRTLERF 540
>gi|1335873|gb|AAB01091.1| ATP-dependent RNA helicase, partial [Mus musculus]
Length = 479
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 143/257 (55%), Gaps = 22/257 (8%)
Query: 276 LALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
LA+QV H+ VAK + +VGGMST+KQ+R+L PE+V+ TPGRLWEL+ H
Sbjct: 1 LAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPH 60
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L L L V+DEADRM+E GHF EL +++ML N S S
Sbjct: 61 LSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML---NDSQYNPS--------------- 102
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
RQTLVFSAT+ L ++ H K + ++ + ++ L ++ GMR ++DLT
Sbjct: 103 -RQTLVFSATLTLVHQAPARILHK--KHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRER 159
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L E+ I C+ ++KD YLYY L + GR++VF SI+ ++ +S LLK+L +
Sbjct: 160 GTVETLTETKIHCETDEKDLYLYYFL-MQYPGRSLVFANSISCIKRLSGLLKVLDVMPLN 218
Query: 516 LHAQMQQRARLKLFSQM 532
LHA M Q+ RL+ Q
Sbjct: 219 LHACMHQKQRLRNLEQF 235
>gi|331215191|ref|XP_003320276.1| hypothetical protein PGTG_01188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309299266|gb|EFP75857.1| hypothetical protein PGTG_01188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 874
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 219/442 (49%), Gaps = 82/442 (18%)
Query: 155 NGPDDAEEELVNEAEISTEFD-----AWNELRLHPLLMKSIYRLQFKEPTPIQKACIP-- 207
+G D E ++ N+ I FD AW +L+L + +++Y L F +PT +Q+A +P
Sbjct: 210 DGMSDMERDVDNQL-IMLPFDDSLLPAWLDLKLASPIKRALYNLSFTKPTAVQEASLPIS 268
Query: 208 -AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
+++ +D++ AETGSGKTLA+ LPI+ L+ + ML+ + + P +
Sbjct: 269 LSSSDSPRDLVVIAETGSGKTLAYALPILNALI--LSPPSPMLK----SSPQILP---IV 319
Query: 267 ALIITPTRELALQVTDHLKGVAKGI-----------------------NVRVVPIVGGMS 303
L++TPTREL LQV H+ K + + V I GG++
Sbjct: 320 TLVLTPTRELCLQVKAHIDTFLKAMCSETQSSQEEGATNEPSSSKNRTGITTVSICGGIA 379
Query: 304 TEKQERLLKARPE-----------VVVGTPGRLWELMSGGEKHLVEL-HTLSFFVLDEAD 351
KQ + L+ + +V+ TPGRLW+++ ++ + L + ++DEAD
Sbjct: 380 IAKQRKQLERSKKLMEPGKGGLGCIVIATPGRLWDMIQSWDEFAEGIKRKLDWLIIDEAD 439
Query: 352 RMIENGHFRELQSII-------DMLPMTNGSNKG-----------QSEQTQNCVTVSSLQ 393
+MIE GHF EL+ I+ D P N + E T +
Sbjct: 440 KMIEKGHFEELEKILKLTKRPKDRRPRHTTDNNNADEDDGEEEEWEDEWTSQANDADNYI 499
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQ-----SVNGLNSIETLSERAGMR-ANVA 447
++K +T+VFSAT + + + LK S K K S+ + + L E+ R +
Sbjct: 500 KEKIRTMVFSAT--MDKNLQINLKKRSFKGKPPAVGGSIPPADPMHDLLEQIDFRDPHPE 557
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
++DLT + L+E IEC +DKD YL + + + GRTIVF +SI+ALR +S +L
Sbjct: 558 LIDLTPQGRMVGGLKECKIECVLKDKDLYLLHFM-LRYTGRTIVFLSSISALRRLSPMLN 616
Query: 508 ILGID--VWTLHAQMQQRARLK 527
+L D V TLH++MQQR+RLK
Sbjct: 617 LLLPDSTVLTLHSEMQQRSRLK 638
>gi|164658650|ref|XP_001730450.1| hypothetical protein MGL_2246 [Malassezia globosa CBS 7966]
gi|159104346|gb|EDP43236.1| hypothetical protein MGL_2246 [Malassezia globosa CBS 7966]
Length = 502
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 220/470 (46%), Gaps = 72/470 (15%)
Query: 62 GFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRK----------RSSANEEDSGDGDGD 111
GF + E DE+ N ++ K K P K +K+R+ ANE S D
Sbjct: 62 GFDVVHEADESGKNHRV-KIVKADPAPKAKAKRREIQKQGNHKNEHQEANERTSSQQDRG 120
Query: 112 GDEDGSGVQKQEEK-----NLKNETGKKKKKKKKGKKIKTVEES---------VAVSNG- 156
+E + + + + +E K +K+K V ++ A G
Sbjct: 121 ANEAATEAKSRAKTPSIPTTQSHELPSTKDRKRKASAALDVHDADRDIGTLLQTAREQGM 180
Query: 157 --PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA----A 210
DDA ++ + W LHP L ++ L F +PT +Q A + + +
Sbjct: 181 LHEDDAGDD--GQEAADAAAPGWASYALHPQLKMALKSLGFHKPTDVQAATLRPSLGLES 238
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
+DV+G A+TGSGKTLA+ LPI+ +LE D L ALI+
Sbjct: 239 SMPRDVVGIAQTGSGKTLAYALPILHYVLEHSAHTEDTQRD-------------LEALIL 285
Query: 271 TPTRELALQVTDHLKGV--AKGINVRVVPIVGGMSTEKQERLLKAR--PEVVVGTPGRLW 326
TPTRELALQV H++ V A G V + GGMS +KQER+L+ V+V TPGRLW
Sbjct: 286 TPTRELALQVCTHIRAVVDAAGRFANVATVCGGMSVQKQERMLQQHGGAHVIVATPGRLW 345
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+L+ + + + F V+DEADRMIE GHF E+ SI+ M+ T G+ +
Sbjct: 346 DLLKQDDALALRVRRTRFLVIDEADRMIETGHFAEMDSILSMVRRTKGAVADANSAM--- 402
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ---SVNGLNSIETLSERAGMR 443
QT V+SAT ++ + LK + KQ + + N+++ L R R
Sbjct: 403 -----------QTFVYSAT--MTKTLQANLKRAPWRKKQRTAASSNNNTLDDLLARIDFR 449
Query: 444 -ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+++LT +A+ L E+ IEC +DKD YLYY+L QGRT+VF
Sbjct: 450 DPEPVVIELTPQRHVADTLYEAKIECVGQDKDTYLYYLLLR-YQGRTLVF 498
>gi|397573945|gb|EJK48944.1| hypothetical protein THAOC_32221 [Thalassiosira oceanica]
Length = 980
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 168/275 (61%), Gaps = 21/275 (7%)
Query: 110 GDGDEDGSGVQKQEEKNLKNETGK---KKKKKKKGKKIKTVEESVAVSNGPDDAEEELVN 166
G D+ G+ ++E LK + K K++K+ K + +++ + S A ++G D +
Sbjct: 181 GKPDDPFQGLSRRERVRLKRKLKKEQVKERKRLKREGLQSSKNSDAKTDGSKD------D 234
Query: 167 EAEISTEFDAWN----ELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAET 222
EA +++ W+ + LH L + ++ L++ PTPIQ + +PAA +D++GAA T
Sbjct: 235 EAAVASLQTTWSISAPGVTLHETLSRGLHSLKYSYPTPIQASTLPAAILGRRDIVGAAPT 294
Query: 223 GSGKTLAFGLPIMQRLLEEREKAAKMLEDKG--EEAEKYAPKGHLRALIITPTRELALQV 280
GSGKTL++GLPI+Q LL+ER+ +A E + P L+ALI+TPTRELALQV
Sbjct: 295 GSGKTLSYGLPILQYLLDERDASASRSCGVATPESTRERLP---LQALILTPTRELALQV 351
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLL-KARPEVVVGTPGRLWELMSGGE-KHLVE 338
T L+ V+ +V++ IVGG + KQ+R L K RP V+V TPGRLWELMS + +HL +
Sbjct: 352 TSELQKVSCN-SVKIGTIVGGFAEVKQQRTLNKVRPPVLVATPGRLWELMSSKDYEHLND 410
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
L L F +DEADRMI+ G F +L+ I +++ N
Sbjct: 411 LTQLRFLCVDEADRMIKQGSFPQLRQIFELIDAAN 445
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 37/161 (22%)
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSK--------QSVNGLNSIETLSERAGMRANVAI 448
RQT ++SAT+ L +K K K +V+G +I + + +G R +
Sbjct: 535 RQTFIYSATLTLPPSMHHLIKKDVSKKKPRRKGRQPTTVDG--AIAEMLDISGARGETKV 592
Query: 449 VDLTN--------------------MCVLANKLEESF----IECKEEDKDAYLYYILSVH 484
VDL++ + +L E IEC + KD+++Y L
Sbjct: 593 VDLSSANAKKDTKSEKNGQRTGSGSLSSPTTRLPEGLTLGQIECAQRHKDSHVYAYLVTT 652
Query: 485 GQGRT---IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
QG + +VFC SIAA+R + LK LG+ V LHAQMQQ
Sbjct: 653 RQGSSGPCLVFCNSIAAVRRVGETLKTLGLPVKMLHAQMQQ 693
>gi|116202351|ref|XP_001226987.1| hypothetical protein CHGG_09060 [Chaetomium globosum CBS 148.51]
gi|88177578|gb|EAQ85046.1| hypothetical protein CHGG_09060 [Chaetomium globosum CBS 148.51]
Length = 1002
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 175/340 (51%), Gaps = 48/340 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L P ++ SI RL+F +PT IQ IP + G DV+G A TGSGKTLAFG+PI++
Sbjct: 200 WVPLDLSPQILSSIARLKFAKPTAIQARAIPQIMN-GHDVVGKAATGSGKTLAFGIPIVE 258
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV--R 294
L +R + + AEK P A+I++PTRELA Q+ DHLK + G+
Sbjct: 259 SWLAKRAE--------NQTAEKKGPI----AMILSPTRELAHQICDHLKLLCAGLTTGPY 306
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ + GG++ +KQ+R L+ R ++VVGTPGR+WELMS L L + F V+DEADR++
Sbjct: 307 ICSVTGGLAVQKQQRQLE-RADIVVGTPGRMWELMSSSNSVLGSLRGIDFLVVDEADRLL 365
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
++GHF++ + I+ + T + + R RQTLVFSAT F K
Sbjct: 366 KDGHFKDAEEILKAIDRTVPGEEADGDSDDEA------PRHHRQTLVFSAT------FNK 413
Query: 415 KLKHGSLKSKQSVN---GLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECKE 470
L+ L K N S+E L ++ R VD + +A L+E I+C
Sbjct: 414 NLQQ-KLAGKARFNLTSDTESLEYLLKKLNFREERPKFVDTNPISQMAENLKEGLIQCAT 472
Query: 471 E---------DKDAYLYYILS------VHGQGRTIVFCTS 495
+ + D ++Y + VH GRT TS
Sbjct: 473 DVAARGLDIPNIDLVIHYHVPRSADDYVHRSGRTARASTS 512
>gi|350587164|ref|XP_003356832.2| PREDICTED: ATP-dependent RNA helicase DDX24-like, partial [Sus
scrofa]
Length = 444
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 136/240 (56%), Gaps = 22/240 (9%)
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++ +VGGMST+KQ+R+L +PE+V+ TPGRLWEL+ + HL L L V+DEADR
Sbjct: 1 IKTAILVGGMSTQKQQRMLNRQPEIVIATPGRLWELVKEKQPHLSNLRQLRCLVIDEADR 60
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E GHF EL +++ML N Q KRQTLVFSAT+ L
Sbjct: 61 MVEKGHFAELSQLLEML------NDSQYN-------------PKRQTLVFSATLTLVHQA 101
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
++ H K + ++ ++ L ++ GMR ++DLT L E+ I C+ ++
Sbjct: 102 PARILHK--KHAKKIDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE 159
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
KD YLYY L + GRT+VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 160 KDLYLYYFL-MQYPGRTLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 218
>gi|328860816|gb|EGG09921.1| hypothetical protein MELLADRAFT_34213 [Melampsora larici-populina
98AG31]
Length = 525
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 201/391 (51%), Gaps = 55/391 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA--AHQGKDVIGAAETGSGKTLAFGLPI 234
W+ +L +L +I+ L F +PTP+Q A +P + + +D++ AETGSGKTLA+ +PI
Sbjct: 9 WSHHQLPSVLKHAIHTLSFDKPTPVQDATLPISLSSTPSRDLVAIAETGSGKTLAYAIPI 68
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--- 291
+ LL+ + + P ++ALI+TPTREL LQV H+ +
Sbjct: 69 INSLLDSLKLPT------SPDCPDDLP---IKALILTPTRELCLQVKSHIDSFVLAMCTP 119
Query: 292 -------------NVRVVPIVGGMSTEKQERLLK-----------ARPEVVVGTPGRLWE 327
+ + + GG++ KQ + L+ + ++V TPGRLW+
Sbjct: 120 TGDTGKEKPKNRSGISTIAVCGGIAAAKQRKQLERSQRLYNSERAGKGSILVATPGRLWD 179
Query: 328 LMSGGEKHLVEL-HTLSFFVLDEADRMIENGHFRELQSIIDML--PMTNGSNKGQSE--- 381
L+ + + L + V+DEAD+M+E GHF E++ I+ ++ P N ++
Sbjct: 180 LIQSWDALANGIRRRLDWLVVDEADKMVEKGHFAEVEKILKLIQRPSKTLENSNWADDWG 239
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSER 439
+ Q V ++ +T++FSAT+ L + +K + + + + +E L ER
Sbjct: 240 KDQKVVV-----KEDVRTMIFSATMDKHLQINLKKNWRQSRAQRDRVAATKDPLEDLLER 294
Query: 440 AGMR-ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAA 498
R ++DL+ +A L+E IEC +DKD YL++ L + GR++VF +SI+A
Sbjct: 295 IDFRDEEPEVIDLSPKGRVAVGLKECKIECVLKDKDLYLFHFL-LRYPGRSLVFLSSISA 353
Query: 499 LRHISSLLKIL--GIDVWTLHAQMQQRARLK 527
LR ++ ++ +L V TLH+ MQQRARLK
Sbjct: 354 LRRLAPIVTLLFPKSTVLTLHSAMQQRARLK 384
>gi|349605099|gb|AEQ00450.1| ATP-dependent RNA helicase DDX24-like protein, partial [Equus
caballus]
Length = 443
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 136/240 (56%), Gaps = 22/240 (9%)
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++ +VGGMST+KQ+R+L +PE+VV TPGRLWEL+ HL L L V+DEADR
Sbjct: 1 IKTAILVGGMSTQKQQRMLNRQPEIVVATPGRLWELVKEKHPHLSNLRQLRCLVVDEADR 60
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E GHF EL +++ML S+ N KRQTLVFSAT+ L
Sbjct: 61 MVEKGHFAELSQLLEML----------SDSQYN---------PKRQTLVFSATLTLVHQA 101
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
++ H K + ++ ++ L ++ G+R ++DLT L E+ I C+ ++
Sbjct: 102 PTRILHK--KHTKKIDKTAKLDLLMQKIGLRGKPKVIDLTRNEATVETLTETKIHCETDE 159
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
KD YLYY L + GRT+VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 160 KDLYLYYFL-MQYPGRTLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 218
>gi|336373626|gb|EGO01964.1| hypothetical protein SERLA73DRAFT_49383 [Serpula lacrymans var.
lacrymans S7.3]
Length = 474
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 184/389 (47%), Gaps = 86/389 (22%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++++L + L+ ++ R+ + PT IQ ACIP G+D IG A+TGSGKT+AF LPI+
Sbjct: 42 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLL-SGRDCIGNAKTGSGKTIAFALPIL 100
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+L E+ P G + AL++TPTRELA Q++D + G+++R
Sbjct: 101 QKLSED-------------------PYG-IFALVLTPTRELAFQISDQFAVLGAGLSIRT 140
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM--SGGEKHLVELHTLSFFVLDEADRM 353
IVGGM Q L RP VVV TPGR+ + + S GE L + F VLDEADR+
Sbjct: 141 AVIVGGMDMMTQALELDNRPHVVVATPGRIVDHLRSSSGEW---SLSRIKFLVLDEADRL 197
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL + D+LP K+RQT +F+AT+ S D
Sbjct: 198 LTPTFSPELSYLFDVLP------------------------KERQTCLFTATLTPSIDKL 233
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++ K K ++ +N AN+ V L ++F+ +
Sbjct: 234 AEVPPRPGKQKPFIHRMN------------ANIETV---------VTLNQNFVLVPSHVR 272
Query: 474 DAYLYYILS-----------VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
+ YLY++L + TI+FCT +++SLLK L I LH+++ Q
Sbjct: 273 ETYLYHLLCNPPELAASLRQLVQPPPTIIFCTKPRTAAYLTSLLKTLSIRSTALHSRLTQ 332
Query: 523 RAR---LKLF-SQMITWIRKRPKGDRGKD 547
R R L LF S +I + G RG D
Sbjct: 333 RERLTSLSLFRSSVIPVLVSTDVGARGLD 361
>gi|341902886|gb|EGT58821.1| hypothetical protein CAEBREN_15104 [Caenorhabditis brenneri]
Length = 554
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 177/379 (46%), Gaps = 75/379 (19%)
Query: 158 DDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVI 217
D A + V +E + + +L + + + + + K TP+Q ACIP G D++
Sbjct: 65 DTATPQPVQISEENMTTKKFQQLGVASWITQQLQTMHIKTATPVQAACIPKIL-DGSDIL 123
Query: 218 GAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELA 277
G A TG+GKTLAF +PI+Q+L P G + ALI+TPTRELA
Sbjct: 124 GCARTGTGKTLAFAIPILQKL-------------------SVDPYG-IFALILTPTRELA 163
Query: 278 LQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
Q+ D V K I ++ IVGG S +Q R L RP +VV TPGRL +L+ + +
Sbjct: 164 FQIADQFVAVGKPITLKCSVIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIA 223
Query: 338 ELH-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
++ + FFVLDEADRM+E + +L+ I + +P +K
Sbjct: 224 KVFKKIQFFVLDEADRMLEGQYNDQLKPIFESIP------------------------QK 259
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC- 455
RQTL+ SATI N +N + +S R D TN
Sbjct: 260 RQTLLLSATIT--------------------NNINMLHKVSTRKPYFFE----DKTNADE 295
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGI 511
++LE+ F+ C KDAYL Y++ + + ++F + + ++ + + LG
Sbjct: 296 TTVDRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGF 355
Query: 512 DVWTLHAQMQQRARLKLFS 530
V +LH+Q+ Q+ RL S
Sbjct: 356 RVGSLHSQIAQKQRLAALS 374
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 176/373 (47%), Gaps = 75/373 (20%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
++ PD++EE EA + W +L L+ L K+ L++K P+ IQK IP A QG
Sbjct: 41 TSDPDESEE---TEAPKCEQLQTWKDLGLNETLCKACEELKWKAPSKIQKEAIPVAL-QG 96
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
KD+IG AETGSGKT AF LPI+ LLE P+ + AL++TPT
Sbjct: 97 KDIIGLAETGSGKTGAFALPILHALLEN-------------------PQRYF-ALVLTPT 136
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL + + +
Sbjct: 137 RELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLK 196
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L + + V+DEADR++ EL I+ +LP
Sbjct: 197 G--FNLKAIKYLVMDEADRILNMDFEVELDKILKVLP----------------------- 231
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
++R+T +FSAT+ KKL+ SLK V N +T+
Sbjct: 232 -RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTV----------------- 270
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
++L++ +I + KD YL +IL+ ++FC++ + +L+ LG+
Sbjct: 271 -----DQLQQYYIFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAA 325
Query: 514 WTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 326 IPLHGQMSQNKRL 338
>gi|154314076|ref|XP_001556363.1| hypothetical protein BC1G_04981 [Botryotinia fuckeliana B05.10]
Length = 490
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 231/484 (47%), Gaps = 85/484 (17%)
Query: 33 LDSLKWNHSFSAEDNDPFAFLVGSNELDGGFLSLEEIDEASYNLQIPKPEKGKPGKKLNS 92
+DSL WN E P F E GF LEE+D+ G ++S
Sbjct: 43 VDSLPWN-----EVTMPDMF-----EDAEGFYGLEEVDDVEVV------RDGDVVTFVSS 86
Query: 93 KKRKRSSANEEDSGDGDGDGDEDGSGVQK---QEEKNLKNETGKKKKKK----------- 138
K + + +EE G GD + DE S V+ E++++++T + +K+
Sbjct: 87 KIQPKKDDDEEFEGFGDDNEDEKTSEVKPILTPTEESVEDKTPEGQKENIEKKPKPEKKQ 146
Query: 139 --------KKGKKIKT---------------VEESVAVSNGP-DDAEEELVNEAEISTEF 174
+ +KI +++ + P + + L +A +
Sbjct: 147 KKDKPDTKDQEEKIPNKKEKKQKKEKAQQQPIDKDAGLKQDPLKNVFQALEEDAAKEVDV 206
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+W EL L + ++ ++ F +PTPIQ IP G DV+G A TGSGKTLAFG+PI
Sbjct: 207 SSWEELDLSSNTLSALSKMGFSKPTPIQSEAIPEVL-AGHDVVGKASTGSGKTLAFGIPI 265
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR 294
+++ LE + D+ E + P ALI++PTRELA Q+T+H+ + KG+
Sbjct: 266 VEKWLEAYGEL-----DEDELKKNTRPP---TALILSPTRELAHQLTEHITALCKGMPTS 317
Query: 295 --VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
V + GG+S +KQ+R L A+ ++++GTPGRLWE +S + L + F V+DEADR
Sbjct: 318 PWVAAVTGGLSVQKQQRQL-AKADIIIGTPGRLWEGISSSNELSASLKQVRFLVIDEADR 376
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ +GHF+E + I++ L T+G + RQTLVFSAT F
Sbjct: 377 LLTDGHFKEAEEILNALDRTHGDED----------DEEEDELPPRQTLVFSAT------F 420
Query: 413 RKKLKHG-SLKSKQSV-NGLNSIETLSERAGMRANVA-IVDLTNMCVLANKLEESFIECK 469
K L+ + K KQS + S+E L ++ R VD+ + +A L+E +EC
Sbjct: 421 HKGLQQKLAGKGKQSFKDESQSMEYLLKKLNFREEKPKFVDVNPISQMAANLKEGMVECG 480
Query: 470 EEDK 473
E+K
Sbjct: 481 GEEK 484
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 185/390 (47%), Gaps = 85/390 (21%)
Query: 143 KIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQ 202
++K EE+ PD EE V W++L L +L K+ +L++K P+ IQ
Sbjct: 20 EVKNTEET---EQTPDPIEEAPVT----------WSDLGLVDVLCKACEQLKWKTPSKIQ 66
Query: 203 KACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK 262
+ IP A QGKD+IG AETGSGKT AF LPI+Q LLE P+
Sbjct: 67 RESIPVAL-QGKDIIGLAETGSGKTAAFALPILQALLEN-------------------PQ 106
Query: 263 GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTP 322
H ALI+TPTRELA Q+++ + + GI V+ + IVGG+ Q +L +P +++ TP
Sbjct: 107 RHF-ALILTPTRELAFQISEQFEALGSGIGVKSIVIVGGLDMTSQALMLAKKPHIIIATP 165
Query: 323 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQ 382
GRL + +S + L L F V+DEADR++ E+ I+ ++P
Sbjct: 166 GRLVDHLSNTKGF--NLRALKFLVMDEADRILNMDFEAEVDKILKVIP------------ 211
Query: 383 TQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGM 442
++R+T +FSAT+ + VN L +RA +
Sbjct: 212 ------------RERRTFLFSATMT-----------------KKVNKL-------QRACL 235
Query: 443 RANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
+ V V+++ KL + ++ + KD YL +IL+ + +VFC++
Sbjct: 236 QDPVR-VEVSTKYQTVEKLLQYYVFIPAKFKDVYLVHILNENAGNSFMVFCSTCNNTIRT 294
Query: 503 SSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+ LL+ LG LH QM Q RL ++
Sbjct: 295 ALLLRNLGFTAVPLHGQMSQNKRLAALTKF 324
>gi|341882300|gb|EGT38235.1| hypothetical protein CAEBREN_08382 [Caenorhabditis brenneri]
Length = 554
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 171/360 (47%), Gaps = 75/360 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + + + + + K TP+Q ACIP G D++G A TG+GKTLAF +PI+Q
Sbjct: 82 FQQLGVASWITQQLQTMHIKTATPVQAACIPKIL-DGSDILGCARTGTGKTLAFAIPILQ 140
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L P G + ALI+TPTRELA Q+ D V K I ++
Sbjct: 141 KL-------------------SVDPYG-IFALILTPTRELAFQIADQFVAVGKPITLKCS 180
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMIE 355
IVGG S +Q R L RP +VV TPGRL +L+ + + ++ + FFVLDEADRM+E
Sbjct: 181 VIVGGRSLIQQARELSERPHIVVATPGRLADLIESDQDVIAKVFKKIQFFVLDEADRMLE 240
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+ +L+ I + +P +KRQTL+ SATI
Sbjct: 241 GQYNDQLKPIFESIP------------------------QKRQTLLLSATIT-------- 268
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC-VLANKLEESFIECKEEDKD 474
++N L+ + T R D TN ++LE+ F+ C KD
Sbjct: 269 ---------NNINMLHKVST-------RKPYFFEDKTNADETTVDRLEQKFVVCPVAVKD 312
Query: 475 AYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
AYL Y++ + + ++F + + ++ + + LG V +LH+Q+ Q+ RL S
Sbjct: 313 AYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIAQKQRLAALS 372
>gi|268529640|ref|XP_002629946.1| Hypothetical protein CBG03667 [Caenorhabditis briggsae]
Length = 565
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 178/381 (46%), Gaps = 84/381 (22%)
Query: 158 DDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVI 217
+D + ++E ++T ++EL + + + + + K TP+Q ACIP G D++
Sbjct: 78 NDPQPFQISEDNMTTR--KFSELGVSSWITQQLQTMHIKTATPVQAACIPRIL-DGSDIL 134
Query: 218 GAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELA 277
G A TG+GKTLAF +PI+Q+L P G + ALI+TPTRELA
Sbjct: 135 GCARTGTGKTLAFAIPILQKL-------------------SIDPYG-IYALILTPTRELA 174
Query: 278 LQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
Q+ D V K I ++ IVGG S Q R L RP +VV TPGRL +L+ + +
Sbjct: 175 FQIADQFTAVGKPITLKCSVIVGGRSLIHQARELSERPHIVVATPGRLTDLIESDPEVIA 234
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ + FFVLDEADRM+E + +L+ I +P +KR
Sbjct: 235 K--KIQFFVLDEADRMLEGQYNDQLKPIFQSIP------------------------EKR 268
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIET----LSERAGMRANVAIVDLTN 453
QTL+ SATI Q++N L+ + T E G +
Sbjct: 269 QTLLLSATIT-----------------QNINTLHKVSTRKPYFFEDKGKDDETTV----- 306
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKIL 509
++LE+ F+ C KDAYL Y++ + + ++F + + ++ + + L
Sbjct: 307 -----DRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGL 361
Query: 510 GIDVWTLHAQMQQRARLKLFS 530
G V +LH+Q+ Q+ RL S
Sbjct: 362 GFRVGSLHSQIPQKQRLAALS 382
>gi|308484167|ref|XP_003104284.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
gi|308258253|gb|EFP02206.1| hypothetical protein CRE_25008 [Caenorhabditis remanei]
Length = 572
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 181/382 (47%), Gaps = 78/382 (20%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
+N P + ++E ++T+ ++EL + +++ + + TP+Q ACIP G
Sbjct: 24 TNAPQPVQ---ISEENMTTK--KFSELGVSSWIIQQLQTMHISTATPVQAACIPKIL-SG 77
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
D++G A TG+GKTLAF +PI+Q+L + P G + ALI+TPT
Sbjct: 78 SDILGCARTGTGKTLAFAIPILQKLSID-------------------PYG-IYALILTPT 117
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+ D V K I ++ IVGG S Q R L RP +VV TPGRL +L++
Sbjct: 118 RELAFQIADQFSAVGKPITLKCSVIVGGRSLIHQARELSDRPHIVVATPGRLADLINSDA 177
Query: 334 KHLVELH-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSL 392
+ + ++ + FFVLDEADRM+E + +L+ I + +P
Sbjct: 178 EIIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFEAIPA--------------------- 216
Query: 393 QRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLT 452
KRQTL+ SATI N +N + +S R D
Sbjct: 217 ---KRQTLLLSATIT--------------------NNINMLHKVSTRKPYFFEDKSKDAE 253
Query: 453 NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKI 508
+ ++LE+ F+ C KDAYL Y++ + + ++F + + ++ + +
Sbjct: 254 ST---VDRLEQKFVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEG 310
Query: 509 LGIDVWTLHAQMQQRARLKLFS 530
LG V +LH+Q+ Q+ RL S
Sbjct: 311 LGFRVGSLHSQIPQKQRLAALS 332
>gi|346466157|gb|AEO32923.1| hypothetical protein [Amblyomma maculatum]
Length = 487
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 174/359 (48%), Gaps = 78/359 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L+ ++ + L K P+PIQ+ CIPA + GKD IG A+TGSGKTLAF LPI+Q
Sbjct: 32 FKDLKLNKWMIDQLDTLGIKNPSPIQENCIPAILN-GKDCIGCAKTGSGKTLAFALPILQ 90
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E+ P G + ALI+TPTRELA Q+++ K V K +R
Sbjct: 91 KLFED-------------------PYG-IFALILTPTRELAFQISEQFKVVGKAAGLRDC 130
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q ++L P VVV TPGRL + + L + F VLDEADR++E
Sbjct: 131 VIVGGMDMVTQGQILAESPHVVVATPGRLADHLESCNTF--TLKRIRFLVLDEADRLLE- 187
Query: 357 GHFRE-LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF E L++I LP KKRQTL+FSATI + + +
Sbjct: 188 GHFNEQLKTIFAALP------------------------KKRQTLLFSATITATLE---E 220
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L++ ++ + + T+ E L++ ++ ++A
Sbjct: 221 LRNIAMTDPFFYTAPSDVVTVEE----------------------LDQRYVLTPVSVREA 258
Query: 476 YLYYI----LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
YL +I L +G I+F + + +S LK LG LH+QM QR RL S
Sbjct: 259 YLVHILHKFLDSMPKGSVIIFTGTCKGCQVLSIALKSLGFPNAPLHSQMPQRVRLASLS 317
>gi|270005640|gb|EFA02088.1| hypothetical protein TcasGA2_TC007723 [Tribolium castaneum]
Length = 447
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 176/355 (49%), Gaps = 77/355 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++++L+L+P +++ + + PTPIQ CIP G+D IGAA+TGSGKTLAF LPI+
Sbjct: 5 SFDKLQLNPWIIRQCATIGVRSPTPIQTNCIPPIL-AGRDCIGAAKTGSGKTLAFALPIL 63
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+L E+ P G + ALI+TPTRELA Q+ D + K +N+R
Sbjct: 64 QKLCED-------------------PYG-IFALILTPTRELAFQIADQFAVIGKVMNLRH 103
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q + L +P +VV TPGRL + + + + L F VLDEADR++
Sbjct: 104 CVIVGGMDMVVQGKDLARKPHIVVATPGRLADHLESC--NTFNFNKLRFLVLDEADRLL- 160
Query: 356 NGHFRE-LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
GHF E +++I LP K+RQ L FSATI D +
Sbjct: 161 GGHFDEQIKTIFQALP------------------------KERQNLFFSATI---TDTLE 193
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
KLK + K + A A VA V+ +LE++++ C ++ KD
Sbjct: 194 KLKDVTGK-----------DVFFYEAP--AEVATVE---------QLEQNYVLCPKDVKD 231
Query: 475 AYLYYILSVH---GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
AYL + + G ++F + + +S L +G + LHA M+Q+ RL
Sbjct: 232 AYLVETIRTYRATNDGNILIFTNTCKNCQVLSMTLNEVGFENVALHAMMKQQQRL 286
>gi|336386445|gb|EGO27591.1| hypothetical protein SERLADRAFT_360268 [Serpula lacrymans var.
lacrymans S7.9]
Length = 520
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 184/398 (46%), Gaps = 95/398 (23%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++++L + L+ ++ R+ + PT IQ ACIP G+D IG A+TGSGKT+AF LPI+
Sbjct: 79 SFDDLNISSPLLAALSRMSIRTPTEIQVACIPPLL-SGRDCIGNAKTGSGKTIAFALPIL 137
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+L E+ P G + AL++TPTRELA Q++D + G+++R
Sbjct: 138 QKLSED-------------------PYG-IFALVLTPTRELAFQISDQFAVLGAGLSIRT 177
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM--SGGEKHLVELHTLSFFVLDEADRM 353
IVGGM Q L RP VVV TPGR+ + + S GE L + F VLDEADR+
Sbjct: 178 AVIVGGMDMMTQALELDNRPHVVVATPGRIVDHLRSSSGEW---SLSRIKFLVLDEADRL 234
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL + D+LP K+RQT +F+AT+ S D
Sbjct: 235 LTPTFSPELSYLFDVLP------------------------KERQTCLFTATLTPSIDKL 270
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++ K K ++ +N AN+ V L ++F+ +
Sbjct: 271 AEVPPRPGKQKPFIHRMN------------ANIETV---------VTLNQNFVLVPSHVR 309
Query: 474 DAYLYYILS--------------------VHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
+ YLY++L + TI+FCT +++SLLK L I
Sbjct: 310 ETYLYHLLCNPPELAASLRRIPPDTEKRELVQPPPTIIFCTKPRTAAYLTSLLKTLSIRS 369
Query: 514 WTLHAQMQQRAR---LKLF-SQMITWIRKRPKGDRGKD 547
LH+++ QR R L LF S +I + G RG D
Sbjct: 370 TALHSRLTQRERLTSLSLFRSSVIPVLVSTDVGARGLD 407
>gi|390332079|ref|XP_781784.3| PREDICTED: probable ATP-dependent RNA helicase DDX49
[Strongylocentrotus purpuratus]
Length = 478
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/355 (31%), Positives = 176/355 (49%), Gaps = 76/355 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+++ L LH L++ + K+PTPIQ CIP +G D IG A+TGSGKT AF LPI+
Sbjct: 13 SFSGLGLHDWLVRQCEAVGIKQPTPIQHNCIPPIL-KGSDCIGCAKTGSGKTAAFALPIL 71
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+L E+ P G + L++TPTREL +Q+ + + + K I +RV
Sbjct: 72 QKLSED-------------------PYG-VFGLVVTPTRELGIQIAEQFRVLGKPIGLRV 111
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
++GG+ +Q R L +P +V+ TPGRL + + +LH + F VLDEADR++E
Sbjct: 112 TVVIGGIDMVEQGRELSKKPHIVIATPGRLADHIKSTST--FDLHAIKFLVLDEADRLLE 169
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+L+ I D LP KRQTL+FSATI D K+
Sbjct: 170 GNFGPDLEVIFDFLP------------------------AKRQTLLFSATI---TDTMKE 202
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ S+ S + +A VA V+ +L++ ++ + KDA
Sbjct: 203 LQKMSMDKPFSWHS-------------KAPVATVE---------QLDQRYVLMPAQVKDA 240
Query: 476 YLYYILSVHGQGR----TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL YI+S + I+F ++ +S +L+ LG+ TLH+ ++Q+ R+
Sbjct: 241 YLMYIISEFTEKNRDHSLIIFTSTCKYCHVLSIMLRNLGMQCATLHSLVKQKTRI 295
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 177/373 (47%), Gaps = 75/373 (20%)
Query: 157 PDDAEEELVNEAEISTEFD---AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
PD ++ + +EAE + + D W +L L+ L K+ L++K P+ IQK IP A QG
Sbjct: 43 PDTSDPDEADEAEEAPKDDQPLTWKDLGLNDTLCKACEELKWKAPSKIQKEAIPVAL-QG 101
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
KDVIG AETGSGKT AF LPI+ LLE P+ + AL++TPT
Sbjct: 102 KDVIGLAETGSGKTGAFALPILHALLEN-------------------PQRYF-ALVLTPT 141
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL + + +
Sbjct: 142 RELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLK 201
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L + + V+DEADR++ EL I+ +LP
Sbjct: 202 GF--NLKAIKYLVMDEADRILNMDFEVELDKILKVLP----------------------- 236
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
++R+T +FSAT+ KKL+ SLK V N +T+
Sbjct: 237 -RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTV----------------- 275
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
++L++ +I + KD YL +IL+ ++FC++ + +L+ LG+
Sbjct: 276 -----DQLQQYYIFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAA 330
Query: 514 WTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 331 IPLHGQMSQNKRL 343
>gi|340507841|gb|EGR33722.1| hypothetical protein IMG5_042580 [Ichthyophthirius multifiliis]
Length = 729
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 123/191 (64%), Gaps = 15/191 (7%)
Query: 182 LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE 241
+HPL+ +S+ F PT IQ + H D + A++TGSGKTL+FG+PIM
Sbjct: 16 IHPLINQSLLECNFDTPTDIQAYVLSCYKHYN-DFLVASQTGSGKTLSFGIPIM------ 68
Query: 242 REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN--VRVVPIV 299
+++L DK +E +K P+ +++ LI+ PTREL LQ+ +HL + K +RV IV
Sbjct: 69 ----SEILFDKEDEKDK-KPQNYIKCLILAPTRELVLQIENHLNQINKHSKNLIRVGSIV 123
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENGH 358
GG+S EKQ R+L P++++ TPGRLW+++ E ++ L+ + +FV+DEADRM+E GH
Sbjct: 124 GGISKEKQRRILSYIPDILIATPGRLWDMIENYEHDCLKRLNQIKYFVIDEADRMVELGH 183
Query: 359 FRELQSIIDML 369
F+EL +IID +
Sbjct: 184 FKELDNIIDQI 194
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLY-YILSVHGQGRTIV 491
++ L R IVDLT+ ++ L+E C EEDK YLY YI G+ I+
Sbjct: 440 MQALMIRIKFSGKPKIVDLTSTVLIPKNLKEFKTVCIEEDKPIYLYDYIKKRCGES-FII 498
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
F SI+ + I LL ILG LH++MQQR RLK Q
Sbjct: 499 FNNSISYSKKILHLLTILGFKCLGLHSEMQQRQRLKKLDQF 539
>gi|156362250|ref|XP_001625693.1| predicted protein [Nematostella vectensis]
gi|156212537|gb|EDO33593.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 175/360 (48%), Gaps = 72/360 (20%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
E+ I + + L + L ++ +L +K P+ IQ+ IP A QGKDVIG AETGSGK
Sbjct: 6 ESAIEDDKTTFKSLGVVDALCEACKQLGWKTPSKIQREAIPVAL-QGKDVIGLAETGSGK 64
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
T AF LPI+Q LL+ ++ L ALI+TPTRELA Q+++ +
Sbjct: 65 TGAFALPILQALLDNPQR--------------------LFALILTPTRELAFQISEQCEA 104
Query: 287 VAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
+ GI V+ IVGG+ Q +L +P +++ TPGRL + + + L TL + V
Sbjct: 105 LGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGF--SLRTLKYLV 162
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+DEADR++ +E+ ++ ++P K+R+T +FSAT+
Sbjct: 163 MDEADRILNMDFEKEVDKLLKVIP------------------------KERRTFLFSATM 198
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
+KL+ SL++ V +T+ KL++S++
Sbjct: 199 TKKV---QKLQRASLQAPVKVEVATKYQTV----------------------EKLQQSYL 233
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ KD YL Y+L+ +VFC + ++ ++ +L+ LG+D LH QM Q RL
Sbjct: 234 FIPSKFKDCYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLGLDAVPLHGQMSQSKRL 293
>gi|313885567|ref|ZP_07819317.1| DEAD-box ATP-dependent RNA helicase CshA [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619297|gb|EFR30736.1| DEAD-box ATP-dependent RNA helicase CshA [Eremococcus coleocola
ACS-139-V-Col8]
Length = 526
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 179/357 (50%), Gaps = 74/357 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++L L L++++ L F+EPTPIQ+ IP QG+D++G A+TG+GKT AFGLP++Q
Sbjct: 3 FSDLNLKTELIETLDELGFEEPTPIQQQAIPFVL-QGRDLVGQAQTGTGKTAAFGLPMLQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L D A L+ALII PTRELA+QV D L ++KG+ +V
Sbjct: 62 GL------------DTDHRA--------LQALIIAPTRELAIQVHDELYSLSKGLKTKVY 101
Query: 297 PIVGGMSTEKQ-ERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG S KQ +R+ K +P+V+VGTPGRL +LM + +++ L ++DEAD M+
Sbjct: 102 AVYGGYSIGKQIDRIQKLKPQVIVGTPGRLLDLM---RRQIIDTSYLKTLIMDEADEMLN 158
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G ++++I++ P + RQTL+FSAT+
Sbjct: 159 MGFIEDIKAIVEQTPSS------------------------RQTLMFSATMP-------- 186
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
S++ L+++ A V + + A+ +++ F++C++ +K
Sbjct: 187 ---------------KSVQNLAQQ--FLTQPAEVKIEAKHLTADLIDQYFVKCRDSEKFD 229
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + + I+F + + I L + G D +H + Q+ R ++ ++
Sbjct: 230 ILTRMLDIESPDKAIIFARTKKRVDEIGRGLSLRGYDAELIHGDVTQQKRTQVMNEF 286
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 166/353 (47%), Gaps = 78/353 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L+ L ++ L++K P+ IQK IP A QGKDVIG AETGSGKT AF LPI+Q
Sbjct: 57 WKDLGLNETLCQACEELKWKAPSKIQKEAIPVAL-QGKDVIGLAETGSGKTGAFALPILQ 115
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE P+ + AL++TPTRELA Q+ + + + GI ++
Sbjct: 116 ALLEN-------------------PQRYF-ALVLTPTRELAFQIGEQFEALGSGIGIKCC 155
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGGM Q L +P +++ TPGRL E M G L + + V+DEADR+
Sbjct: 156 VVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLVMDEADRI 210
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL I+ +LP ++R+T +FSAT+
Sbjct: 211 LNMDFEVELDKILKVLP------------------------RERRTFLFSATMTKKV--- 243
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KKL+ SLK V N +T+ + L++S++ + K
Sbjct: 244 KKLQRASLKDPVKVEVSNKYQTVEQ----------------------LQQSYLFIPVKYK 281
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 282 DVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 334
>gi|332030497|gb|EGI70185.1| Putative ATP-dependent RNA helicase DDX47 [Acromyrmex echinatior]
Length = 448
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 173/365 (47%), Gaps = 72/365 (19%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
E+ V + + + E W +L L +L K+ L++KEPT IQ+ IP QGKDVIG AE
Sbjct: 5 EKSVEDTKDNVEKITWKDLGLVDILCKTCLDLKWKEPTRIQQEAIPLTL-QGKDVIGLAE 63
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TGSGKT AF LPI+Q LLE P+ + ALI+TPTRELA Q++
Sbjct: 64 TGSGKTAAFALPILQALLEN-------------------PQRYF-ALILTPTRELAFQIS 103
Query: 282 DHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
+ + I V+ V +VGGM Q +L+ +P +++ TPGRL + + + L
Sbjct: 104 EQFDALGSSIGVKTVVLVGGMDMHAQGMILEKKPHIIIATPGRLVDHLENTKGF--NLRQ 161
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
L F V+DEADR++ E+ I+ ++P ++R+TL+
Sbjct: 162 LKFLVMDEADRILNMDFEVEVDKILRVIP------------------------RERRTLL 197
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT+ +KL+ SL++ V +T+ KL
Sbjct: 198 FSATMTKKV---QKLQRASLRNPVKVEVSTKYQTVE----------------------KL 232
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
++ +I + KD YL +IL+ ++FC + + LL+ LG LH QM
Sbjct: 233 QQYYIFIPVKFKDVYLVHILNELAGNSFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMT 292
Query: 522 QRARL 526
Q R+
Sbjct: 293 QNKRI 297
>gi|21464402|gb|AAM52004.1| RE27528p [Drosophila melanogaster]
Length = 507
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 175/378 (46%), Gaps = 85/378 (22%)
Query: 159 DAEEELVNEAEISTEFDA-------WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
D+E L E + +E DA W +L L+ L ++ L++K P+ IQ+ IP A
Sbjct: 38 DSEAALSGEDDKGSEDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVAL- 96
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
QGKDVIG AETGSGKT AF LPI+ LLE P+ + AL++T
Sbjct: 97 QGKDVIGLAETGSGKTGAFALPILHALLEN-------------------PQRYF-ALVLT 136
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL---WEL 328
PTRELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL E
Sbjct: 137 PTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLEN 196
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
M G L + + V+DEADR++ EL I+ +LP
Sbjct: 197 MKG-----FNLKAIKYLVMDEADRILNMDFEVELDKILKVLP------------------ 233
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
++R+T +FSAT+ KKL+ SLK V N +T+ +
Sbjct: 234 ------RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTVEQ---------- 274
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
L++S++ + KD YL +IL+ ++FC++ + +L+
Sbjct: 275 ------------LQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRA 322
Query: 509 LGIDVWTLHAQMQQRARL 526
LG+ LH QM Q RL
Sbjct: 323 LGLAAIPLHGQMSQNKRL 340
>gi|429852313|gb|ELA27456.1| ATP-dependent rRNA helicase rrp3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 476
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 183/381 (48%), Gaps = 76/381 (19%)
Query: 148 EESVAVSNGPDDAEEELV--NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
+ESV ++ P+ EE V N+AE + F +L + L+++ RL + PTPIQ
Sbjct: 27 DESVESTSEPEQEPEEDVTANKAESAKTF---KDLGIVDSLVEACDRLGYTNPTPIQAQS 83
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A Q +DVIG AETGSGKT AF LPI+Q LL++ HL
Sbjct: 84 IPHAL-QNRDVIGLAETGSGKTAAFALPIIQALLDK--------------------PSHL 122
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
L++ PTRELA Q+ + + +N+RV IVGG+ Q L +P +VV TPGRL
Sbjct: 123 FGLVLAPTRELAAQIAASFEALGSLVNLRVAVIVGGLDMVAQAIALGKKPHIVVATPGRL 182
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L +L + V+DEADR+++ + I+ +P
Sbjct: 183 VDHLEKTKGF--SLRSLKYLVMDEADRLLDMDFGPSIDKILKFIP--------------- 225
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + IE+L +RA +R
Sbjct: 226 ---------RERRTFLFSATMS-----------------------SKIESL-QRASLRDP 252
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
V I ++ + L +++I C KD YL Y+++ + + ++F ++ + ++ L
Sbjct: 253 VRISISSSSHQTVSTLIQNYIFCPHNKKDTYLVYLVNEYSGKKIVLFTRTVTETQRLAIL 312
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ LG +H Q+ Q ARL
Sbjct: 313 LRTLGFGAIPIHGQLNQTARL 333
>gi|300120949|emb|CBK21191.2| unnamed protein product [Blastocystis hominis]
Length = 634
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 189/371 (50%), Gaps = 40/371 (10%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+ EA++ W E LH L++ + ++Q +PT IQ+ I AA +GKDV+GAA TGS
Sbjct: 129 IAEAKLLYGSTEWTEFHLHDSLVQKLTQIQCAKPTVIQEKAI-EAAFRGKDVLGAAPTGS 187
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAF +P++ LL+ E+ E+AE ++R +II+PTREL+LQ+ +
Sbjct: 188 GKTLAFCVPVIDWLLKHAS------EEPAEKAE-----WNVRCIIISPTRELSLQINRVI 236
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
+ + N+R ++GG++ KQER+L PE+++GTPGR+W M + L L F
Sbjct: 237 TRLTENTNIRTAGLIGGLAIPKQERMLSHNPEIIIGTPGRIWYFMENYKLGPSNLKNLRF 296
Query: 345 FVLDEADRMIE-NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
V DEAD++++ +G F + T ++ + +Q ++ Q L FS
Sbjct: 297 IVWDEADKLVQKSGLFLSIDH-------TRSLSRDEIDQLRS------------QALFFS 337
Query: 404 ATIALSAD------FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
AT+ + + R ++ + + + S + + + V+ L
Sbjct: 338 ATLQVQTNSPQTRQLRTWMRQLGKRGNPEIVVTGDSSSNSNSSSSSSTASTVETEKPTAL 397
Query: 458 ANKLE-ESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
L S +K+A+L Y S +GRT+VF SI+ L+ + SLL L + V +
Sbjct: 398 PRSLSIRSVHFAGAHEKEAFL-YAFSRQYRGRTLVFFNSISVLKSVYSLLSQLRVPVLRI 456
Query: 517 HAQMQQRARLK 527
++ MQQ+ R++
Sbjct: 457 YSGMQQKQRIQ 467
>gi|24585582|ref|NP_610090.1| CG9253 [Drosophila melanogaster]
gi|7298752|gb|AAF53963.1| CG9253 [Drosophila melanogaster]
gi|384475998|gb|AFH89832.1| FI20110p1 [Drosophila melanogaster]
Length = 507
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 175/378 (46%), Gaps = 85/378 (22%)
Query: 159 DAEEELVNEAEISTEFDA-------WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
D+E L E + +E DA W +L L+ L ++ L++K P+ IQ+ IP A
Sbjct: 38 DSEAALSGEDDKGSEDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVAL- 96
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
QGKDVIG AETGSGKT AF LPI+ LLE P+ + AL++T
Sbjct: 97 QGKDVIGLAETGSGKTGAFALPILHALLEN-------------------PQRYF-ALVLT 136
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL---WEL 328
PTRELA Q+ + + + GI ++ +VGGM Q L +P +++ TPGRL E
Sbjct: 137 PTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLEN 196
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
M G L + + V+DEADR++ EL I+ +LP
Sbjct: 197 MKG-----FNLKAIKYLVMDEADRILNMDFEVELDKILKVLP------------------ 233
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
++R+T +FSAT+ KKL+ SLK V N +T+ +
Sbjct: 234 ------RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTVEQ---------- 274
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
L++S++ + KD YL +IL+ ++FC++ + +L+
Sbjct: 275 ------------LQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRA 322
Query: 509 LGIDVWTLHAQMQQRARL 526
LG+ LH QM Q RL
Sbjct: 323 LGLAAIPLHGQMSQNKRL 340
>gi|195580593|ref|XP_002080120.1| GD24302 [Drosophila simulans]
gi|194192129|gb|EDX05705.1| GD24302 [Drosophila simulans]
Length = 519
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 196/428 (45%), Gaps = 95/428 (22%)
Query: 111 DGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGP-DDAEEELVNEAE 169
D DED SG ++ E+ G ++ + ++ E+ ++ + P DDA EE
Sbjct: 16 DDDEDLSGEEELED-------GDNDHVEEDNEAAQSGEDKLSNGSEPEDDAAEE------ 62
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+ W +L L+ L ++ L++K P+ IQ+ IP A QGKDVIG AETGSGKT A
Sbjct: 63 ---QKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVAL-QGKDVIGLAETGSGKTGA 118
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F LPI+ LLE P+ + AL++TPTRELA Q+ + + +
Sbjct: 119 FALPILHALLEN-------------------PQRYF-ALVLTPTRELAFQIGEQFEALGS 158
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFV 346
GI ++ +VGGM Q L +P +++ TPGRL E M G L + + V
Sbjct: 159 GIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLV 213
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+DEADR++ EL I+ +LP ++R+T +FSAT+
Sbjct: 214 MDEADRILNMDFEVELDKILKVLP------------------------RERRTFLFSATM 249
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
KKL+ SLK V N +T+ + L++S++
Sbjct: 250 TKKV---KKLQRASLKDPVKVEVSNKYQTVEQ----------------------LQQSYL 284
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ KD YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 285 FIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 344
Query: 527 KLFSQMIT 534
++ T
Sbjct: 345 AALNKFKT 352
>gi|392349042|ref|XP_003750274.1| PREDICTED: ATP-dependent RNA helicase DDX24-like, partial [Rattus
norvegicus]
Length = 252
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 131/235 (55%), Gaps = 22/235 (9%)
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
+VGGMST+KQ+R+L PE+V+ TPGRLWEL+ HL L L V+DEADRM+E
Sbjct: 6 LVGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLSNLRQLRCLVIDEADRMVEKD 65
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 417
HF EL +++ML S+ N RQTLVFSAT+ L ++
Sbjct: 66 HFAELSQLLEML--------NDSQYNPN-----------RQTLVFSATLTLVHQAPARIL 106
Query: 418 HGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYL 477
H K + ++ ++ L ++ GMR ++DLT L E+ I C+ ++KD YL
Sbjct: 107 HK--KHVKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYL 164
Query: 478 YYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
YY L + GR++VF SI+ ++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 165 YYFL-MQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 218
>gi|224014332|ref|XP_002296829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968684|gb|EED87030.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 884
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 125/199 (62%), Gaps = 6/199 (3%)
Query: 191 YRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRL--LEEREKAAKM 248
+ L + PTPIQ + +PAA +DV+GAA TGSGKTL++GLPI+Q + L++ E AA
Sbjct: 207 HSLNYSYPTPIQASTLPAAILGRRDVVGAAPTGSGKTLSYGLPILQWVLGLDDAEIAALD 266
Query: 249 LEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQE 308
ED + E K L+ALI+ PTRELA+QVT L + V + IVGG + KQ+
Sbjct: 267 EEDSADAGEPKQ-KRPLQALILVPTRELAIQVTSEL-AIVSCHKVPIGTIVGGFAEVKQK 324
Query: 309 RLL-KARPEVVVGTPGRLWELMSGGE-KHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
R+L + RP V+V TPGRLWELMS E HL ++ L F V+DEADRMI+ G F +L+ I
Sbjct: 325 RVLERKRPGVLVATPGRLWELMSSNEYSHLNDMSQLRFLVIDEADRMIKQGSFPQLKQIF 384
Query: 367 DMLPMTNGSNKGQSEQTQN 385
+++ N + E + N
Sbjct: 385 EVINQANPPPQDDDEASDN 403
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 45/183 (24%)
Query: 397 RQTLVFSATIALSAD----FRKKL--KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
RQT V+SAT+ L +K++ K K++Q+ +I + + AG R IVD
Sbjct: 487 RQTFVYSATLTLPPSTHHLIKKEVNSKKKRKKNQQATTVDGAIAEILDIAGARGETKIVD 546
Query: 451 LTNMC--------------------------------VLANKLEESF----IECKEEDKD 474
L+N+ A +L I C + KD
Sbjct: 547 LSNLVPEGQSQQLKKASKLNAKNDADATSKKTNKEKPSTAARLPPGLTLGEIRCAQRHKD 606
Query: 475 AYLYYILSVHGQGRT---IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQ 531
++LY L QG + +VFC SIAA+R ++ LK LG+ V LHAQM Q++RL
Sbjct: 607 SHLYAYLVTTQQGSSGPCLVFCNSIAAVRRVAETLKTLGLPVKMLHAQMAQKSRLSALES 666
Query: 532 MIT 534
+ T
Sbjct: 667 LKT 669
>gi|195352029|ref|XP_002042518.1| GM23393 [Drosophila sechellia]
gi|194124387|gb|EDW46430.1| GM23393 [Drosophila sechellia]
Length = 519
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 196/428 (45%), Gaps = 95/428 (22%)
Query: 111 DGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGP-DDAEEELVNEAE 169
D DED SG ++ E+ G ++ + ++ E+ ++ + P DDA EE
Sbjct: 16 DDDEDLSGEEELED-------GDNDHVEEDNEAAQSGEDKLSNGSEPEDDAAEE------ 62
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+ W +L L+ L ++ L++K P+ IQ+ IP A QGKDVIG AETGSGKT A
Sbjct: 63 ---QKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVAL-QGKDVIGLAETGSGKTGA 118
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F LPI+ LLE P+ + AL++TPTRELA Q+ + + +
Sbjct: 119 FALPILHALLEN-------------------PQRYF-ALVLTPTRELAFQIGEQFEALGS 158
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFV 346
GI ++ +VGGM Q L +P +++ TPGRL E M G L + + V
Sbjct: 159 GIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLV 213
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+DEADR++ EL I+ +LP ++R+T +FSAT+
Sbjct: 214 MDEADRILNMDFEVELDKILKVLP------------------------RERRTFLFSATM 249
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
KKL+ SLK + N +T+ + L++S++
Sbjct: 250 TKKV---KKLQRASLKDPVKIEVSNKYQTVEQ----------------------LQQSYL 284
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ KD YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 285 FIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 344
Query: 527 KLFSQMIT 534
++ T
Sbjct: 345 AALNKFKT 352
>gi|310659566|ref|YP_003937287.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
gi|308826344|emb|CBH22382.1| ATP-dependent RNA helicase; cold shock [[Clostridium] sticklandii]
Length = 515
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 175/356 (49%), Gaps = 79/356 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NEL L L+K++ + F PTPIQ+ IP A QG D+IG A+TG+GKT AFG+P++
Sbjct: 4 FNELGLQEELLKAVLDMGFDSPTPIQEQIIPLAM-QGIDLIGQAQTGTGKTAAFGIPLLS 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +KG +A ++ALI+ PTRELALQV+ + +AK NV +
Sbjct: 63 KI------------EKGNKA--------VQALILAPTRELALQVSQEINRLAKYKNVEAI 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG KQ R LK P++VV TPGR + M ++ + L + +LDEAD M+
Sbjct: 103 AIYGGEDIGKQIRGLKKNPQIVVATPGRFMDHM---RRNTINLANIQTVILDEADEMLSM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+ K++
Sbjct: 160 GFIEDIETILQEVP------------------------SERQTLLFSATMP------KRI 189
Query: 417 KHGS---LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+ S +KS Q+V + N + + +E+ +++ KE DK
Sbjct: 190 QSVSQKFMKSPQTVA----------------------VKNKTMTVDTIEQRYLDLKERDK 227
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
L ++ +H +I+F + + +S L I G DV +H M+Q R K+
Sbjct: 228 FDALCRLMDIHCPELSIIFGRTKRRVDELSEALSIRGYDVEGIHGDMKQERREKVL 283
>gi|383854018|ref|XP_003702519.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Megachile rotundata]
Length = 453
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 173/374 (46%), Gaps = 79/374 (21%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
D EEE NE W +L + +L K+ L++K PT IQ+ IP QGKD+IG
Sbjct: 9 DVEEENANEM-------TWKDLGIVDVLCKACEDLKWKSPTKIQRESIPLTL-QGKDIIG 60
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+Q LLE P+ + ALI+TPTRELA
Sbjct: 61 LAETGSGKTAAFALPILQALLEN-------------------PQRYF-ALILTPTRELAF 100
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGGM Q +L +P +++ TPGRL + + +
Sbjct: 101 QISEQFEALGSSIGVKCAVIVGGMDMMSQALILAKKPHILIATPGRLIDHLENTKGF--N 158
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L +L F V+DEADR++ E+ I+ ++P ++R+
Sbjct: 159 LRSLKFLVMDEADRILNMDFEVEVDKILRVIP------------------------RERR 194
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
TL+FSAT+ +KL+ SL++ V +T+
Sbjct: 195 TLLFSATMTKKV---QKLQRASLRNPVKVEVSTKYQTV---------------------- 229
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ +I + KD YL +IL+ ++FC + + LL+ LG LH
Sbjct: 230 EKLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHG 289
Query: 519 QMQQRARLKLFSQM 532
QM Q R+ ++
Sbjct: 290 QMSQNKRIAALTKF 303
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 174/367 (47%), Gaps = 73/367 (19%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+ E + EL L L+K++ +L F +PTPIQ IP A + GKD++ +A TGSGKT A
Sbjct: 177 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKTIPLALN-GKDILASASTGSGKTAA 235
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F LPI++RLL ++E A +R L++ PTRELALQ L+ +A+
Sbjct: 236 FLLPILERLL-------------FRDSEYRA----IRVLVLLPTRELALQCQSVLENLAQ 278
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
N+ IVGG+S + QE L+ RP+VV+ TPGRL + + H + L L +LDE
Sbjct: 279 FSNITSCLIVGGLSNKAQEVELRKRPDVVIATPGRLIDHLLNA--HGIGLEDLEILILDE 336
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
ADR+++ G E+ I+D P + RQT++FSAT+
Sbjct: 337 ADRLLDMGFKDEINKIVDSCPTS------------------------RQTMLFSATLN-- 370
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
+ + ++ LS + +R V + +A+ L++ F++ K
Sbjct: 371 ------------------DEVKTLAKLSLQQPIRVQVDA-----LFQVASTLDQEFVKIK 407
Query: 470 EE---DKDAYLYYILS-VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+ D+ A L + + V G TI+FC S + + + + + LH + Q R
Sbjct: 408 SQHLSDRPAILMSLCTRVFNTGGTIIFCRSKKEVHRLCIIFGLSDLKAAELHGNLSQEQR 467
Query: 526 LKLFSQM 532
Q
Sbjct: 468 FDSLQQF 474
>gi|91088115|ref|XP_969791.1| PREDICTED: similar to GA21647-PA [Tribolium castaneum]
gi|270012107|gb|EFA08555.1| hypothetical protein TcasGA2_TC006210 [Tribolium castaneum]
Length = 451
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 168/356 (47%), Gaps = 72/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W++L L +L K+ +L++ +P+ IQK IP A QGKDVIG AETGSGKT AF LPI+Q
Sbjct: 21 WSDLGLVDVLCKACEQLKWAQPSKIQKEAIPVAL-QGKDVIGLAETGSGKTAAFALPILQ 79
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE P+ + ALI+TPTRELA Q+++ ++ + I V+
Sbjct: 80 SLLEN-------------------PQRYF-ALILTPTRELAFQISEQIEALGANIGVKCA 119
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q +L +P +++ TPGRL + + + L L + V+DEADR++
Sbjct: 120 VIVGGMDMMSQALILAKKPHILIATPGRLLDHLENTKGF--NLKALKYLVMDEADRILNM 177
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P ++R T +FSAT+ KKL
Sbjct: 178 DFEVEVDKILKVIP------------------------RERHTFLFSATMTKKV---KKL 210
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ L+ V +T+ KL++ +I + KD Y
Sbjct: 211 QRACLRDPVKVEVSTKYQTV----------------------EKLQQYYIFIPVKFKDVY 248
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +IL+ ++FC++ + LL+ LG+ LH QM Q RL ++
Sbjct: 249 LVHILNEMAGNSFMIFCSTCNNTIRTALLLRNLGLTAVPLHGQMSQNKRLAALTKF 304
>gi|195155425|ref|XP_002018605.1| GL25891 [Drosophila persimilis]
gi|194114758|gb|EDW36801.1| GL25891 [Drosophila persimilis]
Length = 518
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 166/353 (47%), Gaps = 78/353 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L+ L ++ L++K P+ IQ+ IP A QGKDVIG AETGSGKT AF LPI+
Sbjct: 71 WKDLGLNDTLCQACDELKWKAPSKIQREAIPVAL-QGKDVIGLAETGSGKTGAFALPILH 129
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE +P+ + AL++TPTRELA Q+ + + + GI ++
Sbjct: 130 ALLE-------------------SPQRYF-ALVLTPTRELAFQIGEQFEALGSGIGIKCC 169
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGGM Q L +P +++ TPGRL E M G L + + V+DEADR+
Sbjct: 170 VVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLVMDEADRI 224
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL I+ +LP ++R+T +FSAT+
Sbjct: 225 LNMDFEVELDKILKVLP------------------------RERRTFLFSATMTKKV--- 257
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KKL+ SLK V N +T+ + L++S++ + K
Sbjct: 258 KKLQRASLKDPVKVEVSNKYQTVEQ----------------------LQQSYLFIPVKYK 295
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 296 DVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 348
>gi|125987477|ref|XP_001357501.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
gi|54645833|gb|EAL34571.1| GA21647 [Drosophila pseudoobscura pseudoobscura]
Length = 518
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 166/353 (47%), Gaps = 78/353 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L+ L ++ L++K P+ IQ+ IP A QGKDVIG AETGSGKT AF LPI+
Sbjct: 71 WKDLGLNDTLCQACDELKWKAPSKIQREAIPVAL-QGKDVIGLAETGSGKTGAFALPILH 129
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE +P+ + AL++TPTRELA Q+ + + + GI ++
Sbjct: 130 ALLE-------------------SPQRYF-ALVLTPTRELAFQIGEQFEALGSGIGIKCC 169
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGGM Q L +P +++ TPGRL E M G L + + V+DEADR+
Sbjct: 170 VVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLVMDEADRI 224
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL I+ +LP ++R+T +FSAT+
Sbjct: 225 LNMDFEVELDKILKVLP------------------------RERRTFLFSATMTKKV--- 257
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KKL+ SLK V N +T+ + L++S++ + K
Sbjct: 258 KKLQRASLKDPVKVEVSNKYQTVEQ----------------------LQQSYLFIPVKYK 295
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 296 DVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 348
>gi|366986679|ref|XP_003673106.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
gi|342298969|emb|CCC66713.1| hypothetical protein NCAS_0A01550 [Naumovozyma castellii CBS 4309]
Length = 748
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 177/359 (49%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 225 YANFNSLSLSRPVLKGLATLGYTKPSPIQSATIPVAL-SGKDIIAGAVTGSGKTAAFMIP 283
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
+++RLL + K A R +++TPTRELA+Q++D K + K IN
Sbjct: 284 VIERLLFKSAKIAAT-----------------RVIVLTPTRELAIQISDVGKKIGKFING 326
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE+ LKARP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 327 ITFGLAVGGLNLRQQEQELKARPDIVIATPGRFIDHIRNSASFNVD--SVEILVIDEADR 384
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP KRQTL+FSAT+
Sbjct: 385 MLEEGFQEELNEIMQLLP------------------------NKRQTLLFSATM------ 414
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ K KQ V +LS R +R ++D A++L + F+ + D
Sbjct: 415 -------NSKIKQLV-------SLSLRKPVR---IMIDPPKQA--ASRLTQEFVRIRARD 455
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L +GQ R +VF + + +L +LG++V LH + Q RL
Sbjct: 456 HLKPALLFNLIKKLDGYGQKRMVVFVSRKEMAHRLRIILGLLGMNVAELHGSLSQEQRL 514
>gi|403217172|emb|CCK71667.1| hypothetical protein KNAG_0H02520 [Kazachstania naganishii CBS
8797]
Length = 754
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 186/385 (48%), Gaps = 84/385 (21%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
E A N DDA+++ + +N L L ++K + L + +P+PIQ A IP
Sbjct: 222 EFYASDNEADDAKKQT---------HETFNSLSLSRPVLKGLAHLGYTKPSPIQSATIPV 272
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A QGKDVI A TGSGKT AF +PI++RLL + K A R +
Sbjct: 273 AL-QGKDVIAGAVTGSGKTAAFMIPIIERLLFKPSKVA-----------------MTRVI 314
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWE 327
++TPTRELA+Q++D K + + ++ + VGG++ +QE+ LKARP++V+ TPGR +
Sbjct: 315 VLTPTRELAIQISDVAKKIGQFVSGLTFGLAVGGLNLRQQEQALKARPDIVIATPGRFID 374
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ V+ ++ VLDEADRM+E G EL+ I+ MLP
Sbjct: 375 HIRNSASFNVD--SVEILVLDEADRMLEEGFQDELKEIMTMLP----------------- 415
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
KRQ L+FSAT + SK + S+ +LS R +R
Sbjct: 416 -------SKRQNLLFSAT---------------MNSK-----IKSLVSLSLRRPVR---I 445
Query: 448 IVDLTNMCVLANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHI 502
++D A+KL + F+ ++ D K A L+ + L + Q R +VF +
Sbjct: 446 MIDPPKQA--ASKLTQEFVRIRKRDNLKPALLFNLIRKLDSNAQKRIVVFVARKETAHRL 503
Query: 503 SSLLKILGIDVWTLHAQMQQRARLK 527
+L +LG+ V LH + Q RL+
Sbjct: 504 RIILGLLGMAVAELHGSLTQEQRLE 528
>gi|427783023|gb|JAA56963.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 467
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 170/355 (47%), Gaps = 79/355 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L+ ++ + L +P+PIQ+ CIPA GKD IG A+TGSGKTLAF LPI+Q
Sbjct: 12 FADLKLNKWIIDQLETLGISKPSPIQENCIPAIL-SGKDCIGCAKTGSGKTLAFALPILQ 70
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E+ P G + ALI+TPTRELA Q+ D K V K + ++
Sbjct: 71 KLFED-------------------PYG-IFALILTPTRELAFQICDQFKVVGKAVGLKEC 110
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q ++L P VVV TPGRL + + L + F VLDEADR++E
Sbjct: 111 VIVGGMDMVTQGQVLAESPHVVVATPGRLADHLESCNTF--TLKRIRFLVLDEADRLLE- 167
Query: 357 GHFRE-LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
GHF E L++I LP KRQTL+FSATI + + +
Sbjct: 168 GHFNEQLKTIFAALP-------------------------KRQTLLFSATITATLE---E 199
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L++ ++ + T+ E L++ ++ ++A
Sbjct: 200 LRNVAMTDPFFYTAPADVVTVEE----------------------LDQRYVLMPVSVREA 237
Query: 476 YLYYI----LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL +I L +G I+F + + +S LK LG LH+QM QR RL
Sbjct: 238 YLVHILKRFLDSMPKGSVIIFTGTCKGCQVLSIALKSLGFLNAPLHSQMPQRERL 292
>gi|223999113|ref|XP_002289229.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
gi|220974437|gb|EED92766.1| atp-depedent helicase [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 175/370 (47%), Gaps = 69/370 (18%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
PD+ ++ E I T +++ L LHP L+ SI LQ+ PT IQ A IP A +G+DV
Sbjct: 22 PDNDDDNQETEDGIITS-KSFSSLNLHPSLLSSIASLQWTNPTQIQAASIPPAL-EGRDV 79
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
IG AETGSGKT +F +PI+ LLE+ P+ + A+I+ PTREL
Sbjct: 80 IGLAETGSGKTGSFAIPILNYLLEK-------------------PQKQVFAVILAPTREL 120
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A Q+ + + + +G+ V +VGG+ Q L P VVV TPGRL + + +
Sbjct: 121 AFQIHEVMVALGRGMGANSVCVVGGVDMASQAIALARNPHVVVATPGRLLDHLQNTKG-- 178
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
L + + V+DEADRM+ +E+ I++++P +C K
Sbjct: 179 FHLRQIKYLVMDEADRMLSMDFEKEINEILEVIP--------------DC-------EKG 217
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
R+T++FSAT+ + KL+ SL V +T
Sbjct: 218 RRTMLFSATMTSKVE---KLQRASLVDPVRVEVSTKFQT--------------------- 253
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
KL ++++ + KD YL Y+++ H +VF + ++ ++ +L+ LG L
Sbjct: 254 -PKKLLQNYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRNLGFPAICL 312
Query: 517 HAQMQQRARL 526
H QM Q RL
Sbjct: 313 HGQMSQPKRL 322
>gi|300856701|ref|YP_003781685.1| RNA helicase [Clostridium ljungdahlii DSM 13528]
gi|300436816|gb|ADK16583.1| predicted RNA helicase [Clostridium ljungdahlii DSM 13528]
Length = 525
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++L L P ++++I + F+EP+ IQ IP G DVIG A+TG+GKTLAFG P++
Sbjct: 6 FSDLNLDPKVLQAIDDMGFEEPSQIQAESIPVIL-DGNDVIGQAQTGTGKTLAFGAPMLS 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + + H+ ALI+TPTRELA+QV D L +AK V ++
Sbjct: 65 KITTKSK--------------------HISALIVTPTRELAIQVNDELSRIAKFKKVALL 104
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG ++Q R LK +VVVGTPGR+ + + ++ ++L + F +LDEAD M++
Sbjct: 105 PIYGGQPIDRQIRSLKRGMDVVVGTPGRILDHI---KRKTLDLSNIEFLILDEADEMLDM 161
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II TN RQTL+FSAT+
Sbjct: 162 GFIEDIENII---KATNSD---------------------RQTLLFSATMP--------- 188
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I+ LS R M++N+ + + + +K ++ + E K++D+
Sbjct: 189 --------------DQIKKLSSRY-MKSNIKSIKIAKNTLTVDKTKQYYYEIKQKDRFES 233
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V I+FC + + + L+ G +V +H M Q RL
Sbjct: 234 LCRILDVDEPSSAIIFCKTKRGVDELVEGLQARGYNVEGMHGDMGQNQRL 283
>gi|167533855|ref|XP_001748606.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772847|gb|EDQ86493.1| predicted protein [Monosiga brevicollis MX1]
Length = 698
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 152/260 (58%), Gaps = 19/260 (7%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +W+E L+P ++K+I +L F+ PTPIQ+A IP + +D+IG AETGSGKTLA
Sbjct: 268 IPPPLRSWDEAGLNPEMLKAIQKLGFENPTPIQRAAIPIGLN-NRDIIGVAETGSGKTLA 326
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F LP++ ++ +++ ++ + YA +I+ PTR+LA Q+ D A+
Sbjct: 327 FVLPLLNWIIS----LPQLVREQDIDNGPYA-------VILAPTRDLAQQIEDEANKFAR 375
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ VR+V ++GG S E Q L EVV+ TPGRL +++ + H + L+ S+ V+DE
Sbjct: 376 PLGVRLVSVIGGHSREDQSFKLNQGCEVVIATPGRLIDVL---DNHYMVLNQCSYIVMDE 432
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIAL 408
ADRM++ G E+Q I++ +P++N + Q+ + +S + K RQT++F+AT+
Sbjct: 433 ADRMLDMGFEPEVQRILEYIPVSNMKPDTDEAEDQHLLAENSRNKAKYRQTVLFTATMPT 492
Query: 409 SADFRKKLKHGSLKSKQSVN 428
S + +L L+ +VN
Sbjct: 493 SVE---RLARTYLRRPATVN 509
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 164/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L L K+ L++K P+ IQK IP A QGKDVIG AETGSGKT AF LPI+
Sbjct: 59 WKDLGLSETLCKACDELKWKAPSKIQKEAIPVAL-QGKDVIGLAETGSGKTGAFALPILH 117
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE P+ + AL++TPTRELA Q+ + + + GI ++
Sbjct: 118 ALLEN-------------------PQRYF-ALVLTPTRELAFQIGEQFEALGSGIGIKCC 157
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q L +P +++ TPGRL + + + L + + V+DEADR++
Sbjct: 158 VIVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENLKG--FNLKAIKYLVMDEADRILNM 215
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
EL I+ +LP ++R+T +FSAT+ KKL
Sbjct: 216 DFEVELDKILKVLP------------------------RERRTFLFSATMTKKV---KKL 248
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SLK V N +T+ ++L++ ++ + KD Y
Sbjct: 249 QRASLKDPVKVEVSNKYQTV----------------------DQLQQYYLFIPVKYKDVY 286
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 287 LVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 336
>gi|452819711|gb|EME26765.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 414
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 179/355 (50%), Gaps = 73/355 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ EL L ++++ L +PTP Q ACIP + GKD+IG++ETG+GKT++F LPI+
Sbjct: 14 SFEELGLGQWIVETCKALNIMKPTPCQVACIPQTLN-GKDIIGSSETGTGKTMSFVLPIV 72
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+L P G + A+++TPTRELA Q+ D K + +++RV
Sbjct: 73 DKL-------------------SVDPCG-VFAIVLTPTRELAFQIYDQFKAIGNPMSIRV 112
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK-HLVELHTLSFFVLDEADRMI 354
+VGG+ + +Q L+ RP VVV TPGRL +L + + LH++ F VLDEADR++
Sbjct: 113 AVVVGGLESIRQATELENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFLVLDEADRLL 172
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E+G L +I+D+LP+ RQTLV+SAT+
Sbjct: 173 EDGFASSLSTILDVLPV------------------------NRQTLVYSATM------ND 202
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
K++ S + S + S + +R +LE+ ++ + K
Sbjct: 203 KMEQLSKTCRSECFIYTS--SSSRYSQVR----------------ELEQFYLLIPFQMKT 244
Query: 475 AYLYYILSVHG--QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YL Y+L ++G I+F S +H+ L+ LG++V LH++M+Q RLK
Sbjct: 245 CYLAYLL-LYGFPSFSCIIFTGSCKRCQHLFLTLEYLGLNVGVLHSKMKQMERLK 298
>gi|302817632|ref|XP_002990491.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
gi|300141659|gb|EFJ08368.1| hypothetical protein SELMODRAFT_131776 [Selaginella moellendorffii]
Length = 469
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 176/398 (44%), Gaps = 89/398 (22%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDA---------WNELRLHPLLMKSIYRLQFKEPT 199
+ V + PDD EI E DA + EL + L+ + L + PT
Sbjct: 21 DPVPAAERPDDGN---ARSTEICKESDAPEGGGGGGSFEELGVAEWLVGACKELGMRHPT 77
Query: 200 PIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKY 259
P+Q+AC+P +GKDV+G A+TGSGKT AF LPI+QRL E
Sbjct: 78 PVQRACVPQIL-KGKDVLGMAQTGSGKTAAFALPILQRLGEN------------------ 118
Query: 260 APKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVV 319
P G + AL++TPTRELA Q++D K + G+++R +VGGM Q ++L RP VV+
Sbjct: 119 -PYG-IFALVMTPTRELAFQISDQFKALGAGVHLRCAVVVGGMDMTTQAQILMERPHVVI 176
Query: 320 GTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQ 379
TPGR+ + F VLDEAD +++ G ELQ+I D +
Sbjct: 177 ATPGRIKAHIGSDPDIAAAFSKTKFLVLDEADLLLDRGFQDELQTIFDGI---------- 226
Query: 380 SEQTQNCVTVSSLQRKKRQTLVFSATIA--LSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
K+RQTL+FSAT+ L A R H + Q+ GL ++E+L
Sbjct: 227 --------------SKQRQTLLFSATMTGDLQA-LRDLFGHRAF-FYQAYEGLKTVESLD 270
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI---LSVHGQGRTIVFCT 494
+R +I + K+ YL Y+ L + I+F +
Sbjct: 271 QR-------------------------YIFMPGKVKNVYLTYLLENLELEDIRSVIIFVS 305
Query: 495 SIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+S +L LGI LH+ Q RL +Q
Sbjct: 306 RCRTCHLLSLILDELGISAVALHSVKTQPQRLAALNQF 343
>gi|345570196|gb|EGX53021.1| hypothetical protein AOL_s00007g357 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 190/402 (47%), Gaps = 79/402 (19%)
Query: 128 KNET-GKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNE-LRLHPL 185
KNE+ G KK+KK+ VEE+ G + A E++V E + L +
Sbjct: 58 KNESDGDVKKRKKQSSGDSDVEET-----GTEKAGEDVVQGEGEEEEESKSFKELEIIDQ 112
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L +++ L+F +PTPIQ+A IP A GKD+IG AETGSGKT AF LPI+Q L
Sbjct: 113 LCETLEILKFHKPTPIQQASIPLAL-AGKDLIGLAETGSGKTAAFALPILQALY------ 165
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
++P L A I+ PTRELA Q+++ + + + V+ IVGGM
Sbjct: 166 -------------HSPHSTLFACILAPTRELAFQISEQTEAIGGSLGVKTCVIVGGMDMM 212
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP ++V TPGRL + + + L ++ + V+DEADR+++ ++ I
Sbjct: 213 PQAIALSKRPHIIVATPGRLLDHLENTKGF--SLRSIKYLVMDEADRLLDLDFGPIIEKI 270
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +LP +R T +FSAT+ D ++L+ SL +
Sbjct: 271 LKVLP------------------------PQRNTYLFSATMT---DKVERLQRMSLTNPV 303
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V + +T+ L + F+ ++DKD YL Y+++
Sbjct: 304 RVAVSSKYQTV----------------------KSLLQYFMLIPQKDKDTYLVYLVAEKF 341
Query: 486 QGRT-IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
G+T I+F +I + IS LL++LG LH Q+ Q RL
Sbjct: 342 AGKTMIIFTRTIMDTQRISVLLRLLGCSAIPLHGQLSQTGRL 383
>gi|332016384|gb|EGI57297.1| Putative ATP-dependent RNA helicase DDX49 [Acromyrmex echinatior]
Length = 461
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 177/367 (48%), Gaps = 76/367 (20%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+N + +S E +++L+L+ L+ + K+PTPIQ+ CIP G+D IG A+TGS
Sbjct: 1 MNVSNMSKEIKHFSDLKLNSWLLAQCESMGLKKPTPIQQNCIPRIL-MGEDCIGCAKTGS 59
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
GKTLAF LPI+Q+L E+ P G + AL++TPTRELA Q+ D
Sbjct: 60 GKTLAFVLPILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQF 99
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
+ K IN++ IVGGM Q L RP +VV TPGRL + + + L + F
Sbjct: 100 TAIGKAINLKKCVIVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTF--SLQKIKF 157
Query: 345 FVLDEADRMIENGHFR-ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADR++ GHF +L++I LP K++Q L FS
Sbjct: 158 LVLDEADRLL-GGHFDGQLKTIFAALP------------------------KQKQVLFFS 192
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT+ + D K++ + + Q + I T+ E L++
Sbjct: 193 ATMTDTLDKVKQIASAEVFTWQEEDDF-GIATVKE----------------------LDQ 229
Query: 464 SFIECKEEDKDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
++ C ++ D+YL ++ + + G ++F + + +S +L +G LHA
Sbjct: 230 RYVLCPKDVLDSYLVEVIKTFRTTNENGSIMIFTDTCKYCQLLSMMLNNVGFTNVALHAM 289
Query: 520 MQQRARL 526
++Q+ RL
Sbjct: 290 IKQKERL 296
>gi|330803884|ref|XP_003289931.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
gi|325079973|gb|EGC33549.1| hypothetical protein DICPUDRAFT_154383 [Dictyostelium purpureum]
Length = 501
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 70/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L L P L++S +L FK P+ IQ IP + G+D+I +A+TGSGKT +F +PI+
Sbjct: 7 FESLGLAPWLIRSCKQLNFKNPSNIQYNTIPEIIN-GRDIIASAKTGSGKTASFAIPILN 65
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L E+ P G + A+++TPTRELA+Q+ + + +NV+V
Sbjct: 66 LLSED-------------------PYG-VFAVVLTPTRELAVQIAEQFSAIGAPMNVQVS 105
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
++GG+ T KQ +L RP ++V TPGRL ++ G K + L F VLDEADR++
Sbjct: 106 TVIGGIDTVKQALILDKRPHIIVATPGRLASHLTNGLK--IALKFCKFLVLDEADRLLGE 163
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ SI++ LP TQ RQTL+FSAT+
Sbjct: 164 DFELEIASILEYLP----------PPTQ------------RQTLLFSATMT--------- 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
N L +E++S + I + + + L++ +I + KD Y
Sbjct: 193 -----------NNLKKLESISLNSPF-----IFEDNSKYDTVDTLKQEYIYMPAQAKDCY 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+L H IVF + ++ + +L L I +LH+ + Q+ARL
Sbjct: 237 LVYLLKKHIGQSVIVFINNCYSVEAVKGMLNKLDIPAVSLHSFLDQKARL 286
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 195/442 (44%), Gaps = 88/442 (19%)
Query: 109 DGDGDE-DGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNE 167
D G+E DG + EE L + + ++ + + E+ A S+ DD+EEE +
Sbjct: 105 DASGEEFDGLSADEDEEDPLATSDEEAGAEAEEDEAMSDEEDEDAASSSGDDSEEETEAQ 164
Query: 168 --------------AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
AE T F + N L ++KSI L F PTPIQ A IP A G
Sbjct: 165 KERKAAYFDSEQGPAEAHTSFLSMN---LSRPIIKSITTLGFTTPTPIQAATIPVAL-LG 220
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
KDV+G A TGSGKT AF +P+++RL M D+G++A R LI+ PT
Sbjct: 221 KDVVGNAVTGSGKTAAFIIPMLERL---------MYRDRGKKA------AATRCLILAPT 265
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA+Q + +A ++R +VGG+S + QE L+ RP+VV+ TPGRL + +
Sbjct: 266 RELAVQCYEVGSKLAAHTDIRFALVVGGLSVKAQETNLRTRPDVVIATPGRLIDHLRNSP 325
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L L VLDEADRM+E+G EL II P +
Sbjct: 326 TFT--LDALDILVLDEADRMLEDGFSDELTEIITSCPTS--------------------- 362
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
RQT++FSAT+ S D ++ S+N + +R+ R
Sbjct: 363 ---RQTMLFSATMTDSVDELVRM---------SLNKPVRLFVDPKRSTARG--------- 401
Query: 454 MCVLANKLEESFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
L + F+ KE ++ A L + + R I+F S + + +LG
Sbjct: 402 -------LLQEFVRVRAGKETERSALLVALCKRSFKARAIIFYRSKKLAHQMRIMFSLLG 454
Query: 511 IDVWTLHAQMQQRARLKLFSQM 532
+ LH + Q RLK Q
Sbjct: 455 MKCDELHGDLTQEQRLKALQQF 476
>gi|449667317|ref|XP_002168355.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Hydra
magnipapillata]
Length = 429
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 167/350 (47%), Gaps = 73/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L LH L K + +PT IQ +CIP G+D IG+A+TGSGKT AF LPI+Q
Sbjct: 5 FTDLGLHEWLNKQCLEMGISKPTEIQVSCIPEIL-SGRDCIGSAKTGSGKTAAFALPIIQ 63
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E+ P G + ALI+TPTRELA+Q+ D K + K I +
Sbjct: 64 KLSED-------------------PYG-IFALILTPTRELAIQIADQFKALGKSIGLNDA 103
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I+GG+ KQ L +P VV+ TPGRL ++ G K L+ + F VLDEADR++E
Sbjct: 104 VIIGGLDMVKQGMELSNQPHVVIATPGRLASHITSGTKF--SLNKIKFLVLDEADRLLEK 161
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+L+ I D + KKRQTL+FSATI + + K++
Sbjct: 162 SFENDLEVIFDNIA------------------------KKRQTLLFSATITDAINHLKEV 197
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
H + ++++ A V +L++ ++ + KD Y
Sbjct: 198 AHNPFCYE-----------------VKSDFATV---------TELDQRYLLIPSQVKDCY 231
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L ++L + I+F + + + IS +L+ + LH+ M QR RL
Sbjct: 232 LVHLLQNFSEKSVIIFTQTCRSCQVISFMLRKVEFKCAGLHSVMSQRERL 281
>gi|405964769|gb|EKC30218.1| Putative ATP-dependent RNA helicase DDX47 [Crassostrea gigas]
Length = 1146
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 168/342 (49%), Gaps = 72/342 (21%)
Query: 185 LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK 244
+L ++ +L++K PT IQK IP A QG DVIG AETGSGKT AF LPI+Q LL++ ++
Sbjct: 49 VLCEACEQLKWKTPTKIQKEAIPVAL-QGSDVIGLAETGSGKTGAFALPILQTLLDKPQR 107
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMST 304
L AL++TPTRELA Q+++ + + I ++ IVGG+
Sbjct: 108 --------------------LYALVLTPTRELAFQISEQFEALGASIGIKCAVIVGGIDM 147
Query: 305 EKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
Q +L +P +V+ TPGRL + + + L +L + V+DEADR++ +E+
Sbjct: 148 MTQSLMLAKKPHIVIATPGRLVDHLENTKG--FNLRSLKYLVMDEADRILNMDFEQEVDK 205
Query: 365 IIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK 424
I+ +P ++R TL+FSAT+ KL+ SL++
Sbjct: 206 ILKAIP------------------------RERNTLLFSATMTKKV---AKLQRASLQNP 238
Query: 425 QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH 484
V + +T+ +KL++ ++ + KD YL YIL+
Sbjct: 239 VRVEVSSKYQTV----------------------DKLQQYYLFIPVKFKDVYLVYILNEL 276
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+VFC++ A + ++ +L+ LG+ LH QM Q RL
Sbjct: 277 AGNSFMVFCSTCANTQRVALMLRNLGLTAIPLHGQMSQSKRL 318
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 172/376 (45%), Gaps = 79/376 (21%)
Query: 155 NGPD-DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
NG D D E NE + E W +L L+ L ++ L++K P+ IQ+ IP A QG
Sbjct: 50 NGDDADDSSEAENEDQDENEKLTWKDLGLNDTLCQACDELKWKAPSKIQREAIPVAL-QG 108
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
KDVIG AETGSGKT AF LPI+ LLE ++ AL++TPT
Sbjct: 109 KDVIGLAETGSGKTGAFALPILHALLENPQR--------------------FFALVLTPT 148
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMS 330
RELA Q+ + + + I ++ +VGGM Q L +P +++ TPGRL E M
Sbjct: 149 RELAFQIGEQFEALGSSIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMK 208
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
G L ++ + V+DEADR++ EL I+ +LP
Sbjct: 209 G-----FNLKSIKYLVMDEADRILNMDFEVELDKILKVLP-------------------- 243
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
++R+T +FSAT+ KKL+ SLK V N +T+ +
Sbjct: 244 ----RERRTFLFSATMTKKV---KKLQRASLKDPVKVEVSNKYQTVEQ------------ 284
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
L++ ++ + KD YL +IL+ ++FC++ + +L+ LG
Sbjct: 285 ----------LQQYYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALG 334
Query: 511 IDVWTLHAQMQQRARL 526
+ LH QM Q RL
Sbjct: 335 LAAIPLHGQMSQNKRL 350
>gi|432871164|ref|XP_004071864.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Oryzias latipes]
Length = 488
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 180/382 (47%), Gaps = 74/382 (19%)
Query: 145 KTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKA 204
+ EE+ VS+ +D ++ + +AE + + + +L + +L ++ +L +K PT IQ
Sbjct: 11 QNTEETPGVSSCDEDEKQIIDEDAEAAVK--TFKDLGVTDVLCEACDQLGWKSPTKIQVE 68
Query: 205 CIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH 264
IP A QGKDVIG AETGSGKT AF LPI+Q LL A
Sbjct: 69 AIPVAL-QGKDVIGLAETGSGKTGAFALPILQSLL--------------------ASPQR 107
Query: 265 LRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGR 324
L L++TPTRELA Q+++ + + I V+ IVGG+ Q +L +P +V+ TPGR
Sbjct: 108 LHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGR 167
Query: 325 LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQ 384
L + M + L L F V+DEADR++ E+ I+ ++P
Sbjct: 168 LIDHMENTKGF--SLRALKFLVMDEADRILNMDFETEVDKILKVIP-------------- 211
Query: 385 NCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRA 444
++R+T +FSAT+ +KL+ +LK + +
Sbjct: 212 ----------RERRTFLFSATMTKKV---QKLQRAALKD-------------PVKCAVST 245
Query: 445 NVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISS 504
+ VD KL++ ++ + KD YL IL+ ++FC++ + ++
Sbjct: 246 KYSTVD---------KLQQYYVFIPAKYKDCYLVSILNELAGNSFMIFCSTCNNAQRVAL 296
Query: 505 LLKILGIDVWTLHAQMQQRARL 526
+L+ LGI LH QM Q RL
Sbjct: 297 MLRNLGITAIPLHGQMSQNKRL 318
>gi|384487839|gb|EIE80019.1| hypothetical protein RO3G_04724 [Rhizopus delemar RA 99-880]
Length = 425
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 175/368 (47%), Gaps = 74/368 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
+ +++ + KEPT IQ+ACI GKDVIG A+TGSGKT AF +PI+Q+L ++
Sbjct: 41 MCETLKSMAIKEPTEIQRACI-QPIMDGKDVIGGAKTGSGKTAAFAIPILQKLSQD---- 95
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
P G + AL++TPTRELA Q+ + + + KGI V+ +VGGM
Sbjct: 96 ---------------PYG-VFALVLTPTRELAYQIAEQFRVLGKGIGVKECVVVGGMDMM 139
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP +++ TPGRL + + V L F V+DEADRM+ + EL++I
Sbjct: 140 TQALELAKRPHIIIATPGRLRDHIQSSSGA-VNLSRCKFLVMDEADRMLSSTFVPELETI 198
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +LP K RQTL+F+AT+ +
Sbjct: 199 LPLLP------------------------KNRQTLLFTATMT-----------------E 217
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
S+ L E E R V + D++ V N L++ ++ + K YL ++L
Sbjct: 218 SILALKDAE---EDPAKRPFVHVCDMSISTV--NTLDQFYVFVPSQVKVVYLAHLLRTDD 272
Query: 486 --QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL----KLFSQMITWIRKR 539
+ I+FC + I+ +LK LGI LH++M Q+ RL K ++++ +
Sbjct: 273 LKERSVIIFCGRCSTAELITVMLKELGIRCTALHSEMSQQQRLDSLGKFRAEVVKILIST 332
Query: 540 PKGDRGKD 547
G RG D
Sbjct: 333 DVGSRGLD 340
>gi|291230627|ref|XP_002735268.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47-like
[Saccoglossus kowalevskii]
Length = 446
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 180/383 (46%), Gaps = 78/383 (20%)
Query: 150 SVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
+V+V + DD +E E + L L +L ++ +L++KEPT IQ+ IP A
Sbjct: 4 TVSVESAADDQKETTAQEPA------TFKSLGLVDVLCETCEQLKWKEPTKIQRESIPLA 57
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
+GKDVIG AETGSGKT AF LPI+Q LLE ++ L ALI
Sbjct: 58 L-EGKDVIGLAETGSGKTGAFALPILQDLLEHPQR--------------------LFALI 96
Query: 270 ITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
+TPTRELA Q+++ + + I ++ +VGG+ Q L +P VVV TPGRL + +
Sbjct: 97 LTPTRELAFQISEQFEALGSAIGIKCAVVVGGIDMMSQALQLAKKPHVVVATPGRLVDHL 156
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV 389
+ L ++ + V+DEADR++ EL I+ ++P
Sbjct: 157 ENTKGF--NLRSVKYLVMDEADRILNMDFEIELDKILKVIP------------------- 195
Query: 390 SSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIV 449
++R+T ++SAT+ KL+ SLK+ V +T+
Sbjct: 196 -----RERRTYLYSATMTKKV---AKLQRASLKNPVKVEVNTKYQTV------------- 234
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
KL + ++ + KD YL YIL+ +VFC++ + ++ +L+ L
Sbjct: 235 ---------EKLLQYYLFIPSKYKDVYLVYILNELAGNSFMVFCSTCNNTQRVALMLRNL 285
Query: 510 GIDVWTLHAQMQQRARLKLFSQM 532
G+ LH QM Q RL + ++
Sbjct: 286 GLTAVPLHGQMSQNKRLGMLNKF 308
>gi|241957775|ref|XP_002421607.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
gi|223644951|emb|CAX40951.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
Length = 592
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 179/376 (47%), Gaps = 76/376 (20%)
Query: 157 PDDAEEELVNEAEISTE--FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
P+D EE+ N E ST ++ L+L ++K I L+F +PTPIQ A IP A GK
Sbjct: 94 PEDTPEEIANFYEQSTHQSHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIAL-LGK 152
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D++ A+TGSGKT A+ +PI++RLL Y P + +I+TPTR
Sbjct: 153 DIVAGAQTGSGKTGAYMIPIIERLL-------------------YKPSTSTKVIILTPTR 193
Query: 275 ELALQVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
ELALQV + K ++ + N+ + VGG++ +QE LK RP++V+ TPGRL + +
Sbjct: 194 ELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSP 253
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
V+ + V+DEADRM+E G EL I+ ++P
Sbjct: 254 SFSVQ--DIQVLVIDEADRMLEEGFQEELTEILSLIP----------------------- 288
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
+ KRQTL+FSAT+ I+ L + + + ++D
Sbjct: 289 KHKRQTLLFSATMN-----------------------TRIQDLIQLSLQKPVRIMIDPPK 325
Query: 454 MCVLANKLEESFIECKEED--KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGI 511
A+KL + F+ ++ D K A LY +L R +VF + +L +LG+
Sbjct: 326 QV--ASKLLQQFVRIRKRDHLKPALLYQLLK-GVSTRVVVFVARKETAHKLRIVLGLLGL 382
Query: 512 DVWTLHAQMQQRARLK 527
V LH + Q RL+
Sbjct: 383 KVSELHGALSQEQRLQ 398
>gi|115532548|ref|NP_001040789.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
gi|351065690|emb|CCD61680.1| Protein H20J04.4, isoform b [Caenorhabditis elegans]
Length = 561
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 171/365 (46%), Gaps = 85/365 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++L + + + + +Q K TP+Q ACIP +G D++G A TG+GKTLAF +PI+Q
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKIL-EGSDILGCARTGTGKTLAFAIPILQ 149
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L P G + ALI+TPTRELA Q+ + + K I ++
Sbjct: 150 KL-------------------SVDPYG-IYALILTPTRELAFQIAEQFTALGKPITLKCS 189
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH-TLSFFVLDEADRMIE 355
IVGG S Q R L RP VVV TPGRL +L+ + ++ + FFVLDEADRM+E
Sbjct: 190 VIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLE 249
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+ +L+ I + + +KRQTL+ SATI
Sbjct: 250 GQYNDQLKPIFESI------------------------SEKRQTLLLSATIT-------- 277
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGM------RANVAIVDLTNMCVLANKLEESFIECK 469
N +N + +S R + + + VD +LE+ ++ C
Sbjct: 278 ------------NNINMLHRVSTRKPYFFEDKGKDDESTVD---------RLEQKYVVCP 316
Query: 470 EEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
KDAYL Y++ + + ++F + + ++ + + LG V +LH+Q+ Q+ R
Sbjct: 317 VAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQR 376
Query: 526 LKLFS 530
L S
Sbjct: 377 LAALS 381
>gi|156548270|ref|XP_001601432.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Nasonia
vitripennis]
Length = 460
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 179/379 (47%), Gaps = 78/379 (20%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+E +A +G + A +E +TE W +L + L ++ L++K PT IQ+ IP
Sbjct: 3 DEKIAEVSGDETAADEK------NTENLTWKDLGIVDSLCQACEDLKWKAPTKIQREAIP 56
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
QGKDVIG AETGSGKT AF LPI+Q LLE P+ + A
Sbjct: 57 LTI-QGKDVIGLAETGSGKTAAFALPILQALLEN-------------------PQRYF-A 95
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+TPTRELA Q+++ + + I V+ V IVGGM Q +L +P +++ TPGRL +
Sbjct: 96 LILTPTRELAFQISEQFEALGASIGVKCVVIVGGMDMMTQSLMLAKKPHIIIATPGRLVD 155
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ + L +L F V+DEADR++ E+ I+ ++P
Sbjct: 156 HLENTKGF--NLRSLKFLVMDEADRILNMDFEVEVDKILRVIP----------------- 196
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
++R+TL+FSAT+ +KL+ SL++ V +T+
Sbjct: 197 -------RERRTLLFSATMTKKV---QKLQRASLQNPVKVEVSTKYQTV----------- 235
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
KL++ ++ + KD YL +IL+ ++FC++ + LL+
Sbjct: 236 -----------EKLQQYYVFIPVKFKDVYLVHILNELSGNSFMIFCSTCNNTMRTALLLR 284
Query: 508 ILGIDVWTLHAQMQQRARL 526
LG LH QM Q R+
Sbjct: 285 SLGFMAVPLHGQMSQNKRI 303
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 165/353 (46%), Gaps = 78/353 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L+ L ++ L++K P+ IQ+ IP A QGKDVIG AETGSGKT AF LPI+
Sbjct: 71 WKDLGLNETLCQACDELKWKAPSKIQREAIPVAL-QGKDVIGLAETGSGKTGAFALPILH 129
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE P+ + AL++TPTRELA Q+ + + + GI ++
Sbjct: 130 ALLEN-------------------PQRYF-ALVLTPTRELAFQIGEQFEALGSGIGIKCC 169
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGGM Q L +P +++ TPGRL E M G L + + V+DEADR+
Sbjct: 170 VVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLVMDEADRI 224
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL I+ +LP ++R+T +FSAT+
Sbjct: 225 LNMDFEVELDKILKVLP------------------------RERRTFLFSATMTKKV--- 257
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KKL+ SLK V N +T+ + L++S++ + K
Sbjct: 258 KKLQRASLKDPVKVEVSNKYQTVEQ----------------------LQQSYLFIPVKYK 295
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 296 DVYLVHILNELSGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRL 348
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 167/359 (46%), Gaps = 78/359 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W +L L+ L ++ L+++ P+ IQ+ IP A QGKDVIG AETGSGKT AF LPI+
Sbjct: 70 WKDLGLNETLCQACDELKWRSPSKIQREAIPVAL-QGKDVIGLAETGSGKTGAFALPILH 128
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE P+ + AL++TPTRELA Q+ + + + GI ++
Sbjct: 129 ALLEN-------------------PQRYF-ALVLTPTRELAFQIGEQFEALGSGIGIKCC 168
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRL---WELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGGM Q L +P +++ TPGRL E M G L + + V+DEADR+
Sbjct: 169 VVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKG-----FNLKAIKYLVMDEADRI 223
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ EL I+ +LP ++R+T +FSAT+
Sbjct: 224 LNMDFEVELDKILKVLP------------------------RERRTFLFSATMTKKV--- 256
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KKL+ SLK V N +T+ + L++S++ + K
Sbjct: 257 KKLQRASLKDPVKVEVSNKYQTVEQ----------------------LQQSYLFIPVKYK 294
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
D YL +IL+ ++FC++ + +L+ LG+ LH QM Q RL ++
Sbjct: 295 DVYLVHILNDLAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKF 353
>gi|209882552|ref|XP_002142712.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209558318|gb|EEA08363.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 555
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 177/356 (49%), Gaps = 50/356 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L ++K++ L F PTPIQK IP A G+D++ AETGSGKT AF LP ++
Sbjct: 3 WSSLELSRPILKALNDLNFVNPTPIQKEVIPLAL-AGRDILAEAETGSGKTAAFLLPTIE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRA---LIITPTRELALQVTDHLKGVAKGINV 293
RLL+ A+ + G P G L A LI+ P+RELA+Q D L+ + K +
Sbjct: 62 RLLKFPGIRARKMSPLG-------PTGGLNATKVLILLPSRELAMQCFDVLESLIKYCLI 114
Query: 294 RVVPIV-GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
IV GGMS + E L+++P++V+ TPGR+ +++ V L L +LDEADR
Sbjct: 115 ITRCIVTGGMSQSQHEVTLRSQPDIVIATPGRILDMLINTMG--VHLELLEIVILDEADR 172
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ G RE C+ + + RQT++FSAT++
Sbjct: 173 LLDMGFRRE------------------------CLEILRYVSQCRQTMLFSATLSRGVT- 207
Query: 413 RKKLKHGSLKS--KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
L +L++ + S GL LS G+ ++V+ + L+ L + F+E E
Sbjct: 208 --DLALLTLRNPCRISTIGLGRNAILSNTEGITSDVSTIG------LSTTLNQEFVELNE 259
Query: 471 E-DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E D++ L++ILS R IVF + R IS L ILG LH + Q R
Sbjct: 260 EKDREGALFHILSKIYTERVIVFFQTKKEARRISILCNILGFSAVELHGYLTQEKR 315
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 164/341 (48%), Gaps = 72/341 (21%)
Query: 192 RLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
+L +K PTPIQ+ +P Q KD+IG AETGSGKTLAFGLPI+Q LL
Sbjct: 29 KLGYKIPTPIQQQSLPYTL-QKKDIIGLAETGSGKTLAFGLPILQHLLAN---------- 77
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL 311
P+ + ALI++PTREL +Q+ +H + + I ++ V I+GGM Q + L
Sbjct: 78 ---------PQPY-YALILSPTRELCVQIQEHFQAIGASIALKSVVILGGMDPLAQAKAL 127
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
+P +++GTPG++ + + L L F VLDEAD+++ RE+ +I+D++P
Sbjct: 128 AQKPHIIIGTPGKILYHLENTKGF--NLKQLKFLVLDEADKLLNMDFEREINAILDIIP- 184
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN 431
K+R T +FSAT+ KL+ SLK + +
Sbjct: 185 -----------------------KERNTYLFSATMTNKVS---KLQRASLKDPVKIEVSS 218
Query: 432 SIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
+T+S L+++++ ++ K+ YL Y+L+ +IV
Sbjct: 219 KYQTVS----------------------TLQQNYLFVPDKYKETYLVYLLNELAGLTSIV 256
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
F + I+ LL+ LG +H QM Q RL F++
Sbjct: 257 FVATCQMAIKITLLLRNLGFQAIAIHGQMSQAKRLSSFNKF 297
>gi|401841362|gb|EJT43764.1| MAK5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 435
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 212/452 (46%), Gaps = 91/452 (20%)
Query: 61 GGFLSLEEIDEASYNLQ------IPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDE 114
GGF LEEID + IPK + KL K S N+E +
Sbjct: 23 GGFYGLEEIDGVDVKIVNGKVNFIPKNDS-----KLARDVTKEKSKNKEKRAGAEASP-- 75
Query: 115 DGSGVQKQ--EEKNLKN--------------ETGKKKKKKKKGKKIKTVEESVAVSNGPD 158
GSG++ + E KNL + + G++ + K G + +G +
Sbjct: 76 -GSGLESELLEFKNLDDVEEGELSAASYSLSDEGEQDENKDTG-----------LLDGNE 123
Query: 159 DAEEEL---------VNEAEIS-TEFDAWNELR-LHPLLMKSIYRLQFKEPTPIQKACIP 207
D +E++ +N +IS + W L L +++S+ L F PT IQK IP
Sbjct: 124 DEDEDVLKENVFNQNINIDDISPVDLPEWTNLSSLSMTILQSLQNLNFLRPTEIQKKSIP 183
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
A +GKDV+G A TGSGKTLA+G+PI+++L+ + K P +
Sbjct: 184 AIL-EGKDVLGKASTGSGKTLAYGIPIVEQLITNFSQKNK------------KP----IS 226
Query: 268 LIITPTRELALQVTDHLKGVAKGI----NVRVVPIVGGMSTEKQERLLKARP--EVVVGT 321
LI TPTRELA QVTDHL+ + + + ++ + GG+S +KQ+RLLK ++V+ T
Sbjct: 227 LIFTPTRELAHQVTDHLRKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIVIAT 286
Query: 322 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE 381
PGR EL+ + + ++ +LDEADR++++GHF E + II L + NK +
Sbjct: 287 PGRFLELLEKDNELIKRFSQVNTLILDEADRLLQDGHFDEFEKIIKYLSVERRKNKVKDS 346
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHG----SLKSKQSVNGLNS-IETL 436
+ N K QTLVFSAT S D KL K K + + LN+ IE L
Sbjct: 347 ENDN---------KIWQTLVFSAT--FSIDLFDKLSSSHQAKDRKFKNNEDELNAVIEHL 395
Query: 437 SERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + I+ + + ++ES IEC
Sbjct: 396 MNKIQFNSKPVIIHTNPGSKVGSHIKESLIEC 427
>gi|412987541|emb|CCO20376.1| predicted protein [Bathycoccus prasinos]
Length = 843
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 173/369 (46%), Gaps = 82/369 (22%)
Query: 168 AEISTEFDA--WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
A+ T F A +N+L L L ++ +L + PTPIQ A IP A G+DV G A+TGSG
Sbjct: 201 AKDGTTFSAQCFNDLHLSRPLCRACEKLGYATPTPIQAAIIPIAL-TGRDVCGRAQTGSG 259
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KT AF LP+++R+L + A + +I+ PTRELA+Q ++
Sbjct: 260 KTAAFALPLLERMLHRPKNAVSAIH----------------VVIMVPTRELAVQCAQMIQ 303
Query: 286 GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF- 344
+ + NV+V IVGG+S E+Q L+ RPE+VV TPGRL + H+ H+ F
Sbjct: 304 RLGEYTNVQVATIVGGLSMERQAAALRQRPEIVVATPGRLID-------HVRNTHSFGFE 356
Query: 345 ----FVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
VLDEADR++E G E++ I+ +P ++RQTL
Sbjct: 357 DVAAVVLDEADRLLEMGFLEEIKEIVRNMP------------------------RQRQTL 392
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLAN- 459
+FSAT+ + + + +LS R R + + T M +
Sbjct: 393 LFSATL--------------------TSAVEELASLSMRNPARLSADSLGTTPMTLTEEI 432
Query: 460 -KLEESFIECKEEDKDAYLYYILSVHGQGR-TIVFCTSIAALRHISSLLKILGIDVWTLH 517
K++ F+ KE A+L +LS +G+ TIVF + + +L + I LH
Sbjct: 433 VKIKPQFVAKKE----AHLLSLLSRSFKGKETIVFAKTKVQAHRLKIVLGLSNIKACELH 488
Query: 518 AQMQQRARL 526
M Q RL
Sbjct: 489 GDMTQTQRL 497
>gi|375090043|ref|ZP_09736362.1| hypothetical protein HMPREF9708_00752 [Facklamia languida CCUG
37842]
gi|374565936|gb|EHR37191.1| hypothetical protein HMPREF9708_00752 [Facklamia languida CCUG
37842]
Length = 499
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 74/337 (21%)
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
F+EPTPIQ+ IP A QGKD+IG A+TG+GKT AFGLP++Q L D+ +
Sbjct: 21 FEEPTPIQQQAIPLAL-QGKDLIGQAQTGTGKTAAFGLPLLQHL------------DRNQ 67
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQ-ERLLKA 313
A ++ L++TPTRELA+QV + L + KG+ RV + GG S KQ ER+ +
Sbjct: 68 SA--------IQGLVVTPTRELAIQVQEELYRLGKGVRARVYVVYGGTSLSKQIERIKRQ 119
Query: 314 RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
+P+++VGTPGRL +L+ ++ +++ + L VLDEAD M+ G ++++II P
Sbjct: 120 QPQIIVGTPGRLLDLI---QRKVLKFNHLQTLVLDEADEMLNMGFIEDIKAIIQATP--- 173
Query: 374 GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI 433
K RQTL+FSAT+ I
Sbjct: 174 ---------------------KNRQTLLFSATMP-----------------------PVI 189
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFC 493
LS + + + ++ +M A+ +E+ F +C++++K L L V + I+FC
Sbjct: 190 RDLSGQFLTQPELVKIEAQSMT--ADLVEQYFTKCRDDEKFDLLTRFLDVQTPKQAIIFC 247
Query: 494 TSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
+ + + L + G +H + Q+ R + +
Sbjct: 248 RTKKRVDEVGRGLSLRGYQAEMIHGDITQQKRTSVIN 284
>gi|159130845|gb|EDP55958.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus A1163]
Length = 472
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 178/378 (47%), Gaps = 72/378 (19%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
+SVA + P + ++E E ++ +L + L ++ + +K PTPIQ IP
Sbjct: 27 KSVAQQDDPLETQDE-ATATESRPAPKSFKDLGIIDQLCEACETMGYKAPTPIQAESIPL 85
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A QG+D+IG AETGSGKT AF LPI+Q L+E+ P+ L
Sbjct: 86 AL-QGRDLIGLAETGSGKTAAFALPILQALMEK-------------------PQSFF-GL 124
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
I+ PTRELA Q++ + + INVR IVGGM Q L +P ++V TPGRL +
Sbjct: 125 ILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDH 184
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ + L TL + V+DEADR+++ L I+ +LP
Sbjct: 185 LENTKG--FSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLP------------------ 224
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
++R+T +FSAT++ + +E+L +RA + + +
Sbjct: 225 ------RERRTFLFSATMS-----------------------SKVESL-QRASLSNPLRV 254
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
+N + L +S++ + KD YL Y+L+ TI+F ++ + IS LL+
Sbjct: 255 SVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRS 314
Query: 509 LGIDVWTLHAQMQQRARL 526
LG LH Q+ Q ARL
Sbjct: 315 LGFGAIPLHGQLSQSARL 332
>gi|341877652|gb|EGT33587.1| hypothetical protein CAEBREN_24452 [Caenorhabditis brenneri]
Length = 491
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 166/350 (47%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L + +RL + +P+ IQ+A +P A QGKDVIG AETGSGKT AF +P++Q
Sbjct: 46 FAELGVSQPLCDACHRLGWVKPSKIQQAALPHAL-QGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL+ P+ L++TPTRELA Q+ + + GI + V
Sbjct: 105 SLLDH-------------------PQAFF-CLVLTPTRELAFQIGQQFEALGSGIGLIVA 144
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L RP ++V TPGRL + + + L L F ++DEADR++
Sbjct: 145 VIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKG--FNLKALKFLIMDEADRILNM 202
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
EL I+ ++P ++R+T +FSAT+
Sbjct: 203 DFEVELDKILKVIP------------------------RERRTYLFSATMT--------- 229
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ V+ L ERA +R + A V ++ + L++ +I + K+ Y
Sbjct: 230 --------KKVSKL-------ERASLR-DPARVSISTRYKTVDNLKQHYIFVPNKYKETY 273
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+L+ H IVFC + A ++ +L+ LG+ LH QM Q RL
Sbjct: 274 LVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLHGQMSQEKRL 323
>gi|70991044|ref|XP_750371.1| ATP-dependent RNA helicase [Aspergillus fumigatus Af293]
gi|74669652|sp|Q4WJE9.1|RRP3_ASPFU RecName: Full=ATP-dependent rRNA helicase rrp3
gi|66848003|gb|EAL88333.1| ATP-dependent RNA helicase , putative [Aspergillus fumigatus Af293]
Length = 472
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 177/378 (46%), Gaps = 72/378 (19%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
+SVA + P + ++E E ++ +L + L ++ + +K PTPIQ IP
Sbjct: 27 KSVAQQDDPLETQDE-ATATESRPAPKSFKDLGIIDQLCEACETMGYKAPTPIQAESIPL 85
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A QG+D+IG AETGSGKT AF LPI+Q L+E P+ L
Sbjct: 86 AL-QGRDLIGLAETGSGKTAAFALPILQALMEN-------------------PQSFF-GL 124
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
I+ PTRELA Q++ + + INVR IVGGM Q L +P ++V TPGRL +
Sbjct: 125 ILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRLLDH 184
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ + L TL + V+DEADR+++ L I+ +LP
Sbjct: 185 LENTKG--FSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLP------------------ 224
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
++R+T +FSAT++ + +E+L +RA + + +
Sbjct: 225 ------RERRTFLFSATMS-----------------------SKVESL-QRASLSNPLRV 254
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
+N + L +S++ + KD YL Y+L+ TI+F ++ + IS LL+
Sbjct: 255 SVSSNKYQTVSTLLQSYLFLPHKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRS 314
Query: 509 LGIDVWTLHAQMQQRARL 526
LG LH Q+ Q ARL
Sbjct: 315 LGFGAIPLHGQLSQSARL 332
>gi|328870452|gb|EGG18826.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 507
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 188/400 (47%), Gaps = 79/400 (19%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLM 187
K E+ KKK + + + V S +G D E ++E +T FD +L +HP ++
Sbjct: 41 KEESNNNKKKVLEREALDDVISSDEEDDGIDKVENSKLDE---NTTFD---QLGMHPQII 94
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAK 247
++ R+ FK+PT IQ+ IP A G+D+IG A+TGSGKT AF +PI+Q+LL+ +
Sbjct: 95 EACVRMGFKKPTEIQRESIPHAI-AGRDIIGLAQTGSGKTAAFAIPILQQLLQSPQP--- 150
Query: 248 MLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQ 307
L ALI++PTRELA Q++ + + I V+ +VGGM +Q
Sbjct: 151 -----------------LFALILSPTRELAFQISQQFEALGAVIGVKCGVLVGGMDVMQQ 193
Query: 308 ERLLKARPEVVVGTPGR-LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
+L +P ++VGTPGR ++ L + H L L F V+DEADR++ E+ I+
Sbjct: 194 AMVLARKPHIIVGTPGRVMYHLENTKGFH---LKALKFLVMDEADRLLSMDFEEEINKIL 250
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS 426
++P K R T +FSAT+ KL+ SL
Sbjct: 251 KVIP------------------------KNRNTYLFSATMTSKV---AKLQKASL----- 278
Query: 427 VNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ 486
+N I + VA + + + L + + + KD YL YIL+
Sbjct: 279 ---VNPI---------KVQVASTKYSTV----DTLVQQYCFIPYQHKDCYLTYILNELSG 322
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
IVF + AA +S +L+ LG+ ++ M Q RL
Sbjct: 323 NSAIVFVATCAASNRLSVMLRNLGLGAIPINGNMDQTKRL 362
>gi|260941344|ref|XP_002614838.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
gi|238851261|gb|EEQ40725.1| hypothetical protein CLUG_04853 [Clavispora lusitaniae ATCC 42720]
Length = 748
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 179/380 (47%), Gaps = 76/380 (20%)
Query: 155 NGPDDAEE--ELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
N D AE E +AE ++ L L ++K + L + +P+PIQ A IP A
Sbjct: 214 NDEDSAEAIAEFYEKAESDQAHKSFQSLDLARPVLKGLASLGYTKPSPIQSASIPIAL-L 272
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
GKD++ A TGSGKT A+ +PI++RLL + K A R +I+TP
Sbjct: 273 GKDIVAGAVTGSGKTAAYMIPIIERLLYKSSKVAST-----------------RVVILTP 315
Query: 273 TRELALQVTDHLKGVAKGINVRVVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
TRELA+QV D K + + +N + VGG++ +QE+ LK RP++VV TPGRL + +
Sbjct: 316 TRELAIQVCDVGKKIGRYVNNLTFGLAVGGLNLRQQEQQLKTRPDIVVATPGRLIDHIRN 375
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
L L V+DEADRM+E G EL I+ ++P
Sbjct: 376 SASF--SLDALEILVMDEADRMLEEGFQVELTEILTLIP--------------------- 412
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL 451
+ KRQT++FSAT+ I+ L + + + ++D
Sbjct: 413 --KHKRQTMLFSATMN-----------------------TKIQDLIQLSLNKPVRIMIDP 447
Query: 452 TNMCVLANKLEESFIECKEED--KDAYLYYIL-SV--HGQGRTIVFCTSIAALRHISSLL 506
ANKL + F+ +++D K A LYY+L SV Q R +VF + + +L
Sbjct: 448 PKAA--ANKLVQEFVRIRKKDEMKPALLYYLLKSVDPSQQSRIVVFVSRKETAHRLRIIL 505
Query: 507 KILGIDVWTLHAQMQQRARL 526
+LG+ V LH + Q RL
Sbjct: 506 GLLGMKVSELHGSLTQEQRL 525
>gi|255711296|ref|XP_002551931.1| KLTH0B03278p [Lachancea thermotolerans]
gi|238933309|emb|CAR21493.1| KLTH0B03278p [Lachancea thermotolerans CBS 6340]
Length = 739
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 212/447 (47%), Gaps = 99/447 (22%)
Query: 97 RSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNG 156
+S+ +E D+ D +GD E + ++G + K+ +G++ + +VS+
Sbjct: 149 QSATHEGDATDSEGD------------ESGVDEDSGVESDKQTEGQEALMTAGNGSVSDI 196
Query: 157 PDDAEE---ELVNEAEISTE-----FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
DD+EE E E STE +N L L ++K + L + +P+PIQ A IP
Sbjct: 197 EDDSEEAKAEFYALEEESTEAKKTVHTNFNSLSLSRPVLKGLGALNYVKPSPIQSATIPI 256
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLR 266
A GKD+I A TGSGKT A+ +PI++RLL Y P R
Sbjct: 257 ALL-GKDIIAGAVTGSGKTAAYMIPIIERLL-------------------YKPAQIASTR 296
Query: 267 ALIITPTRELALQVTDHLKGVAKGIN-VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
+++TPTRELA+QV+D +AK +N + VGG++ +QE+ L++RP++V+ TPGRL
Sbjct: 297 VIVLTPTRELAIQVSDVGAKLAKFVNGISFGLAVGGLNLRQQEQTLRSRPDIVIATPGRL 356
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + V+ ++ V+DEADRM+E G EL I+ ++P
Sbjct: 357 IDHIRNSASFNVD--SVEILVIDEADRMLEEGFQDELNEIMSLIP--------------- 399
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
KRQTL+FSAT + SK +N + +LS + ++
Sbjct: 400 ---------SKRQTLLFSAT---------------MNSK-----INQLISLSLKKPVK-- 428
Query: 446 VAIVDLTNMCVLANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALR 500
++D A KL + F+ ++ D K A L+++ L Q R +VF
Sbjct: 429 -IMIDPPRQA--AAKLTQEFVRVRKRDELKPALLFHLIRKLDDLSQKRVVVFVARKEVAH 485
Query: 501 HISSLLKILGIDVWTLHAQMQQRARLK 527
+ +L +LG+ V LH + Q RL+
Sbjct: 486 KLRIILGLLGMKVAELHGSLSQEQRLQ 512
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 166/353 (47%), Gaps = 83/353 (23%)
Query: 180 LRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLL 239
+ LH L K++ + FK+PTPIQ+ IP +G+DV+G A TGSGKT AF +P++Q+L
Sbjct: 273 MDLHKFLFKAVMKKGFKQPTPIQRLTIPLIL-EGQDVVGMARTGSGKTAAFVIPMIQKLA 331
Query: 240 EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIV 299
+ K RA+I++PTRELALQ +K ++ G ++R IV
Sbjct: 332 QHSHKVG------------------ARAIILSPTRELALQTYRVVKELSSGSDLRSCVIV 373
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE----LHTLSFFVLDEADRMIE 355
GG + Q L P++++ TPGRL HL E LHT+ + V DEADR+ E
Sbjct: 374 GGDNMADQFTELARNPDIIIATPGRLVH-------HLTEVNMGLHTVQYIVFDEADRLFE 426
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI-ALSADFRK 414
G +LQ II L + RQTL+FSAT+ ++ A+F
Sbjct: 427 MGFADQLQEIITKLSPS------------------------RQTLLFSATLPSMLAEFV- 461
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
RAG+ +N +V L ++++L SF C+ ++K
Sbjct: 462 ------------------------RAGL-SNPKLVRLNTDTKISDQLSLSFFTCRHDEKF 496
Query: 475 AYLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
A L Y+L + TIVF + + ++ LL I +H QM AR
Sbjct: 497 AALLYLLKDIIKDDEPTIVFTATKFHVEYLHILLDQARIANTFIHGQMDPVAR 549
>gi|348511400|ref|XP_003443232.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Oreochromis niloticus]
Length = 479
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + +L ++ +L +K PT IQ IP A QGKDVIG AETGSGKT AF LPI+
Sbjct: 38 SFKDLGVTEVLCEACDQLGWKSPTKIQIEAIPVAL-QGKDVIGLAETGSGKTGAFALPIL 96
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LL ++ L L++TPTRELA Q+++ + + I V+
Sbjct: 97 QSLLASPQR--------------------LHTLVLTPTRELAFQISEQFEALGSSIGVKC 136
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGG+ Q +L +P VV+ TPGRL + + + L L F V+DEADR++
Sbjct: 137 AVIVGGIDMMSQSLVLAKKPHVVIATPGRLIDHLENTKGF--SLRALKFLVMDEADRILN 194
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P ++R+T +FSAT+ +K
Sbjct: 195 MDFETEVDKILKVIP------------------------RERRTFLFSATMTKKV---QK 227
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ +LK + + + VD KL++ +I + KD
Sbjct: 228 LERAALKDPV-------------KCAVSTKYSTVD---------KLQQYYIFIPSKYKDC 265
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL IL+ I+FC++ + ++ LL+ LGI LH QM Q RL
Sbjct: 266 YLVSILNELAGNSFIIFCSTCNTAQRVALLLRNLGITAIPLHGQMSQNKRL 316
>gi|268573560|ref|XP_002641757.1| Hypothetical protein CBG10097 [Caenorhabditis briggsae]
Length = 486
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L + RL + +P+ IQ+A +P A +GKDVIG AETGSGKT AF +P++Q
Sbjct: 46 FAELGVSQPLCDACLRLGWTKPSKIQQAALPHAL-EGKDVIGLAETGSGKTGAFAIPVLQ 104
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL+ P+ L++TPTRELA Q+ + + GI + V
Sbjct: 105 SLLDH-------------------PQAFF-CLVLTPTRELAFQIGQQFEALGSGIGLIVA 144
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L RP ++V TPGRL + + + L L F ++DEADR++
Sbjct: 145 VIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF--NLKALKFLIMDEADRILNM 202
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
EL I+ ++P K+R+T +FSAT+
Sbjct: 203 DFEVELDKILKVIP------------------------KERRTYLFSATMT--------- 229
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ V+ L ERA +R + A V ++ + L++ +I + K+ Y
Sbjct: 230 --------KKVSKL-------ERASLR-DPARVSISTRYKTVDNLKQHYIFIPNKYKETY 273
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+L+ H IVFC + A ++ +L+ LG+ LH QM Q RL
Sbjct: 274 LVYLLNEHAGNSAIVFCATCATTMQVAVMLRQLGMQAVPLHGQMSQEKRL 323
>gi|115532546|ref|NP_001040788.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
gi|351065689|emb|CCD61679.1| Protein H20J04.4, isoform a [Caenorhabditis elegans]
Length = 488
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 183/385 (47%), Gaps = 88/385 (22%)
Query: 158 DDAEEEL-VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
DD + + ++E ++T+ +++L + + + + +Q K TP+Q ACIP +G D+
Sbjct: 73 DDTPKPIQISEDNMTTK--KFSQLGVCSWITQQLQTMQIKTATPVQAACIPKIL-EGSDI 129
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
+G A TG+GKTLAF +PI+Q+L + P G + ALI+TPTREL
Sbjct: 130 LGCARTGTGKTLAFAIPILQKLSVD-------------------PYG-IYALILTPTREL 169
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A Q+ + + K I ++ IVGG S Q R L RP VVV TPGRL +L+ +
Sbjct: 170 AFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTI 229
Query: 337 VELH-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
++ + FFVLDEADRM+E + +L+ I + + +
Sbjct: 230 AKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESI------------------------SE 265
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGM------RANVAIV 449
KRQTL+ SATI N +N + +S R + + + V
Sbjct: 266 KRQTLLLSATIT--------------------NNINMLHRVSTRKPYFFEDKGKDDESTV 305
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSL 505
D +LE+ ++ C KDAYL Y++ + + ++F + + ++ +
Sbjct: 306 D---------RLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYM 356
Query: 506 LKILGIDVWTLHAQMQQRARLKLFS 530
+ LG V +LH+Q+ Q+ RL S
Sbjct: 357 FEGLGFRVGSLHSQIPQKQRLAALS 381
>gi|153955940|ref|YP_001396705.1| RNA helicase [Clostridium kluyveri DSM 555]
gi|219856282|ref|YP_002473404.1| hypothetical protein CKR_2939 [Clostridium kluyveri NBRC 12016]
gi|146348798|gb|EDK35334.1| Predicted RNA helicase [Clostridium kluyveri DSM 555]
gi|219570006|dbj|BAH07990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 524
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 168/352 (47%), Gaps = 74/352 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++N+L LHP + ++I + F+EP+ IQ IP +G D+IG A+TG+GKTLAFG P++
Sbjct: 5 SFNDLNLHPKVFEAIDNMGFEEPSQIQAESIPVIL-EGNDIIGQAQTGTGKTLAFGAPML 63
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG-HLRALIITPTRELALQVTDHLKGVAKGINVR 294
++ PK H+ ALI+TPTRELA+QV D L +AK + +
Sbjct: 64 SKI---------------------TPKNKHISALILTPTRELAIQVNDELSRIAKFMKIL 102
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
++PI GG E+Q + LK +VVGTPGR+ + + + ++L + F +DEAD M+
Sbjct: 103 LLPIYGGQPIERQIKSLKRGINIVVGTPGRILDHL---HRKTLDLSNIEFLTIDEADEML 159
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ G +++ II SN RQTL+FSAT+
Sbjct: 160 DMGFIEDIEEII------KASNPN------------------RQTLLFSATMP------- 188
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+ ++ L+ + M +N + + + K ++ + E K +D+
Sbjct: 189 ----------------DQVKRLASKY-MSSNTKYITIAKNTLTVEKTKQYYYEIKHKDRF 231
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V I+FC + + + ++ G +V +H M Q RL
Sbjct: 232 ESLCRILDVDEPSSAIIFCKTKRGVDELVESMQARGYNVEGMHGDMGQNQRL 283
>gi|307178385|gb|EFN67130.1| Probable ATP-dependent RNA helicase DDX47 [Camponotus floridanus]
Length = 435
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 166/359 (46%), Gaps = 72/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
D W L L L + +L++ EPT IQ+ IP +GKDVIG AETGSGKT AF LP
Sbjct: 1 MDDWKALGLVDTLCTTCIQLKWNEPTKIQREAIPLVL-EGKDVIGLAETGSGKTAAFALP 59
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I+Q LLE P+ + ALI+TPTRELA Q+++ + + I V
Sbjct: 60 ILQALLEN-------------------PQRYF-ALILTPTRELAFQISEQFEALGSSIGV 99
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ IVGGM Q LL+ +P +++ TPGRL + + + L + F ++DEADR+
Sbjct: 100 KCAVIVGGMDMHAQGLLLEKKPHIIIATPGRLVDHLENTKGF--NLRQIKFLIMDEADRI 157
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ E+ I+ ++P ++R+TL+FSAT+
Sbjct: 158 LNMDFEVEVNKILRVMP------------------------RERRTLLFSATMTKKV--- 190
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+KL+ SL++ V +T+ KL++ +I + K
Sbjct: 191 QKLQRASLRNPVKVEVSTKYQTVE----------------------KLQQYYIFIPVKFK 228
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
D YL +IL+ ++FC + + LL+ LG LH QM Q R+ ++
Sbjct: 229 DVYLVHILNELAGNNFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKF 287
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Apis mellifera]
Length = 452
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W +L + +L K+ L++K PT IQ IP A +GKD+IG AETGSGKT AF LPI+
Sbjct: 19 TWKDLGIVDVLCKACEDLKWKSPTKIQYEAIPLAL-EGKDIIGLAETGSGKTAAFALPIL 77
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LLE P+ + ALI+TPTRELA Q+++ + + I V+
Sbjct: 78 QALLEN-------------------PQRYF-ALILTPTRELAFQISEQFEALGSSIGVKC 117
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q +L +P +++ TPGRL + + + L +L F V+DEADR++
Sbjct: 118 AVIVGGMDMMSQALILAKKPHILIATPGRLVDHLENTKGF--SLRSLKFLVMDEADRILN 175
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P ++R+TL+FSAT+ +K
Sbjct: 176 MDFEVEVDKILRVIP------------------------RERKTLLFSATMTKKV---QK 208
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SL++ V +T+ KL++ +I + KD
Sbjct: 209 LQRASLRNPVKVEVSTKYQTV----------------------EKLQQYYIFIPVKFKDV 246
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL +IL+ ++FC + + LL+ LG LH QM Q R+
Sbjct: 247 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRI 297
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Nasonia
vitripennis]
Length = 456
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 175/371 (47%), Gaps = 89/371 (23%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
TEF +L + ++ + + K+PTPIQ+ CIPA GKD IG A+TGSGKTLAF
Sbjct: 2 TEF---TDLNISSWIIDQLKLIGVKKPTPIQQNCIPAIL-SGKDCIGCAKTGSGKTLAFA 57
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
LPI+Q+L E+ P G + AL++TPTRELA Q+ D + K I
Sbjct: 58 LPILQKLSED-------------------PYG-IFALVLTPTRELAFQIGDQFAAIGKTI 97
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS-----FFV 346
N++ IVGGM Q + L P +VV TPGRL + HL +T S F V
Sbjct: 98 NLKKCTIVGGMDMVVQGQELARHPHIVVATPGRLAD-------HLESCNTFSLARIKFLV 150
Query: 347 LDEADRMIENGHFRE-LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
LDEADR++ GHF E L I LP K RQ+L+FSAT
Sbjct: 151 LDEADRLL-GGHFDEQLSVIFKALP------------------------KNRQSLLFSAT 185
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
I + D K+K S K E + + VA V +L++ +
Sbjct: 186 ITDALD---KVKQVSTK-----------EWFIWESTDDSGVATV---------KELDQRY 222
Query: 466 IECKEEDKDAYLYYILSV----HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ C ++ +DA+L ++ + G ++F + + +S L +G D LHA ++
Sbjct: 223 VLCPKDVRDAFLVEVIRTFRADNENGSIMIFTDTCKNCQLLSMTLNEVGFDNVALHAMIK 282
Query: 522 QRARLKLFSQM 532
Q+ RL S+
Sbjct: 283 QKERLSALSKF 293
>gi|443726900|gb|ELU13896.1| hypothetical protein CAPTEDRAFT_175937 [Capitella teleta]
Length = 453
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 171/369 (46%), Gaps = 82/369 (22%)
Query: 158 DDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVI 217
DDA EE V + L + +L ++ L +K P+ IQK IP A QG DVI
Sbjct: 20 DDAPEETVT----------FKSLGVTDVLCEACEILGWKAPSKIQKESIPVAL-QGSDVI 68
Query: 218 GAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELA 277
G AETGSGKT +F LP++Q LL+ ++ + L++TPTRELA
Sbjct: 69 GLAETGSGKTGSFALPVLQTLLDNPQR--------------------MYCLVLTPTRELA 108
Query: 278 LQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
Q+++ + + I V+ IVGGM Q +L +P +++ TPGRL + + +
Sbjct: 109 FQISEQFEALGASIGVKCAVIVGGMDMMTQSMVLAKKPHIIIATPGRLVDHLENTKGF-- 166
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
L L + V+DEADR++ +E+ I+ ++P K+R
Sbjct: 167 NLRALKYLVMDEADRILNMDFEQEVNKILKVIP------------------------KER 202
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
+T ++SAT+ KL+ LK+ V +T+
Sbjct: 203 KTYLYSATMTSKV---AKLQRACLKNPVKVEVSTKYQTV--------------------- 238
Query: 458 ANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
+KL++S+ + KD YL YIL+ IVFC++ A + ++ +L+ LG+ LH
Sbjct: 239 -DKLQQSYCFIPAKFKDVYLVYILNELAGNSFIVFCSTCANTQRVALMLRNLGMTAIPLH 297
Query: 518 AQMQQRARL 526
QM Q RL
Sbjct: 298 GQMNQTKRL 306
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 168/369 (45%), Gaps = 70/369 (18%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
+A ST + + L L+K++ L F++PTPIQ A IP A GKDV+G A TGSGK
Sbjct: 211 DAATSTSDVTFQSMNLSRPLLKALANLGFEKPTPIQAAAIPVALL-GKDVVGGAVTGSGK 269
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
T AF +PI++RLL D+G+ A R +I+ PTRELA+Q
Sbjct: 270 TAAFVIPILERLL---------FRDRGKAA------ATTRVVILCPTRELAVQCHAVATR 314
Query: 287 VAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
+ +VR +VGG+S + QE L+ RP+VV+ TPGRL + + L L +
Sbjct: 315 IGSFTDVRFSLVVGGLSLKGQEAELRTRPDVVIATPGRLIDHLRNSPSF--SLDMLDVLI 372
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+DEADRM+E G EL II P K+RQT++FSAT+
Sbjct: 373 MDEADRMLEEGFAAELGEIISACP------------------------KQRQTMLFSATM 408
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
S D ++ GLN L VD A+ L + F+
Sbjct: 409 TDSVDELIRM------------GLNKPVRL-----------FVDPRKST--ASGLTQEFV 443
Query: 467 EC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
+E+D+ A L + + R I+F S A + + +LG+ LH + Q
Sbjct: 444 RVRDNREDDRPALLMTLCKRTFRTRCIIFFRSKAFAHQMRIVFGLLGMKAGELHGNLTQE 503
Query: 524 ARLKLFSQM 532
RL+ Q
Sbjct: 504 QRLRALQQF 512
>gi|223634733|sp|A5DQF1.2|RRP3_PICGU RecName: Full=ATP-dependent rRNA helicase RRP3
gi|190348857|gb|EDK41404.2| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 182/393 (46%), Gaps = 76/393 (19%)
Query: 134 KKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRL 193
KK K+ K+ E+ + +A +++ +E +F ++EL L P LM++I +L
Sbjct: 27 KKNALKQKKQAPVTEKPEEIVETTSEASQDVNSE----QQFHTFSELNLVPELMEAIEKL 82
Query: 194 QFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKG 253
++ +PTPIQ IP A +GKD+IG A+TGSGKT AF +PI+Q L E +
Sbjct: 83 KYTKPTPIQSGAIPHAL-EGKDIIGLAQTGSGKTAAFAIPILQSLWEAQRP--------- 132
Query: 254 EEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKA 313
AL++ PTRELA Q+ + + G+ VR V IVGGM Q R L
Sbjct: 133 -----------YYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMR 181
Query: 314 RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
+P ++V TPGR+ + + + L +L + V+DEADR+++ L I+ ++P
Sbjct: 182 KPHILVATPGRIMDHLENTKG--FSLKSLQYLVMDEADRLLDMDFGPALDKILKVIP--- 236
Query: 374 GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI 433
KR T +FSAT+ N I
Sbjct: 237 ---------------------TKRTTYLFSATMT-----------------------NKI 252
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFC 493
L +RA + V + ++N A+ L +S + + K+ +L ++L+ IVF
Sbjct: 253 AKL-QRASLHEPVKVA-VSNKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFT 310
Query: 494 TSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ A + + L +ILG LH Q+ Q RL
Sbjct: 311 RTCAHTQRSTLLARILGFSAVPLHGQLTQSQRL 343
>gi|196000560|ref|XP_002110148.1| hypothetical protein TRIADDRAFT_21567 [Trichoplax adhaerens]
gi|190588272|gb|EDV28314.1| hypothetical protein TRIADDRAFT_21567, partial [Trichoplax
adhaerens]
Length = 424
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L ++ RLQ+K+PT IQ IP A GKD+IG AETGSGKT AF LPI+Q LL++ ++
Sbjct: 6 LCQACDRLQWKQPTKIQCEAIPVAL-TGKDIIGLAETGSGKTAAFVLPILQALLDKPQR- 63
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
L ALI+TPTRELA Q+++ ++ + I V+ I+GG+
Sbjct: 64 -------------------LFALILTPTRELAFQISEQIEALGSSIGVQCAVIIGGIDMM 104
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q +L +P +++GTPGRL + ++ + L L + V+DEADR++ E+ I
Sbjct: 105 TQSIMLAKKPHIIIGTPGRLADHLANTKGF--SLRPLKYLVMDEADRILNMDFEAEVDKI 162
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +LP K+R+T +FSAT+ KK+K
Sbjct: 163 LSVLP------------------------KERRTYLFSATMT------KKVKK------- 185
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
+RA ++ V I +++ KL++++I + KD YL IL+
Sbjct: 186 -----------LQRASVQDPVKI-EVSTKYTTVEKLQQTYIFVPAKYKDCYLVSILNELA 233
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+VFC + + I +L+ LG + LH QM Q RL
Sbjct: 234 GNSFMVFCATCINTQRIGLMLRNLGFNAIPLHGQMSQSKRL 274
>gi|17555296|ref|NP_499069.1| Protein T26G10.1 [Caenorhabditis elegans]
gi|465975|sp|P34580.1|DDX47_CAEEL RecName: Full=Putative ATP-dependent RNA helicase T26G10.1
gi|3880293|emb|CAA82362.1| Protein T26G10.1 [Caenorhabditis elegans]
Length = 489
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 166/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ EL + L + RL + +P+ IQ+A +P A QGKDVIG AETGSGKT AF +P++
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHAL-QGKDVIGLAETGSGKTGAFAIPVL 103
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LL+ P+ L++TPTRELA Q+ + + GI +
Sbjct: 104 QSLLDH-------------------PQAFF-CLVLTPTRELAFQIGQQFEALGSGIGLIA 143
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGG+ Q L RP ++V TPGRL + + + L L F ++DEADR++
Sbjct: 144 AVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF--NLKALKFLIMDEADRILN 201
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
EL I+ ++P ++R+T +FSAT+
Sbjct: 202 MDFEVELDKILKVIP------------------------RERRTYLFSATMT-------- 229
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ V+ L ERA +R + A V +++ + L++ +I + K+
Sbjct: 230 ---------KKVSKL-------ERASLR-DPARVSVSSRYKTVDNLKQHYIFVPNKYKET 272
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+L+ H IVFC + A I+ +L+ LG+ LH QM Q RL
Sbjct: 273 YLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRL 323
>gi|453082962|gb|EMF11008.1| ATP-dependent rRNA helicase RRP3 [Mycosphaerella populorum SO2202]
Length = 516
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 164/350 (46%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L + L +K PT IQ+ IP A QGKDVIG AETGSGKT AF LPI+Q
Sbjct: 90 FAELGVREELCDACISLGYKTPTAIQRESIPIAL-QGKDVIGLAETGSGKTAAFALPILQ 148
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE+++ H L++ PTRELA Q++ + + INV+
Sbjct: 149 ALLEKQD--------------------HYFGLVLAPTRELAYQISQQFEALGSLINVKCA 188
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q+ L +P ++V TPGRL + + + L L + V+DEADR+++
Sbjct: 189 VIVGGMDMTPQQIALAKKPHIIVATPGRLMDHLENTKGF--SLRKLKYLVMDEADRLLDL 246
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
L I+ +LP ++R+T++FSAT++ D L
Sbjct: 247 DFGPILDKILQVLP------------------------RERRTMLFSATMSTKLD---NL 279
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+L+S V SI + S + L++S+I + KD Y
Sbjct: 280 TRAALQSPVRV----SISSSSYQT-----------------VKNLKQSYIFIPHKFKDIY 318
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+++ I+F +I I+ LL+ LG LH Q+ Q ARL
Sbjct: 319 LVYLVNEFAGQTCIIFTRTINETARIAFLLRALGRSAIPLHGQLNQSARL 368
>gi|427429668|ref|ZP_18919655.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
gi|425879905|gb|EKV28606.1| ATP-dependent RNA helicase RhlE [Caenispirillum salinarum AK4]
Length = 469
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 165/349 (47%), Gaps = 68/349 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L+ L+K++ ++ PTPIQ IP G+DV+G A+TG+GKT AF LP++Q
Sbjct: 4 FTDLGLNESLLKALAEDGYETPTPIQAKAIPLLL-DGRDVLGIAQTGTGKTAAFALPMLQ 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RL++ +A PKG RALI+TPTRELA+Q+ D +K + + R
Sbjct: 63 RLMDSNRRAG--------------PKG-CRALILTPTRELAVQINDSIKSYGRHLRHRTA 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+ Q R L ++++ TPGRL +LM+ G V + FVLDEADRM++
Sbjct: 108 CIFGGVGMNPQIRALSGGVDLLIATPGRLIDLMNQG---YVRFDKVEEFVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G R+++ ++D LP R TL+FSAT+
Sbjct: 165 GFVRDVRKVVDRLP------------------------GDRHTLLFSATMP--------- 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ L++ G+ + V++T A ++E+ + +DK A
Sbjct: 192 --------------TGVRDLAD--GLLRDPVKVEVTPQSTTAERIEQRVLFVNRDDKRAA 235
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L +I+ HG R +VF + + L+ G+ +H Q AR
Sbjct: 236 LTHIIDSHGIERVLVFTRTKHGADKLVRQLEQDGVGAAAIHGNKSQNAR 284
>gi|328773329|gb|EGF83366.1| hypothetical protein BATDEDRAFT_8371 [Batrachochytrium
dendrobatidis JAM81]
Length = 460
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 187/392 (47%), Gaps = 77/392 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
++ + +A++S E + + L P L+ S+ + + P+ IQ+ACIP + G+D+IG A
Sbjct: 20 QQSTLKQAQVS-ESATFESIGLRPWLIGSLKSISIRHPSEIQQACIPHILN-GRDIIGGA 77
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
+TGSGKT AF LPI+Q+L E+ P G + AL++TP RELA Q+
Sbjct: 78 KTGSGKTAAFALPILQKLSED-------------------PYG-VFALVLTPARELAFQI 117
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ + + GIN+++ +VGGM Q L +P V++ TPGRL + + + +
Sbjct: 118 AEQFRVLGTGINLKLSVVVGGMDMMSQALELSQKPHVIIATPGRLVDHIRSS-SNAIHFK 176
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
+ F V+DEADR++++ +L+ I+ LP +KRQTL
Sbjct: 177 RIRFLVMDEADRLLDDTFSDDLEGILSQLP------------------------QKRQTL 212
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+F+AT+ ++K + SK L + +ER K
Sbjct: 213 LFTATMT------DEIKELQMSSKT----LPFVYECAERYST---------------VEK 247
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRT-IVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
L++ +I +DAYL +I+ G+T I+F + + +LK LG+ LHAQ
Sbjct: 248 LDQQYILVSSNVRDAYLAHIVRESLSGKTMIIFASKCRTCETLRIMLKELGLKSTALHAQ 307
Query: 520 MQQRARL----KLFSQMITWIRKRPKGDRGKD 547
M Q RL K S ++ + G RG D
Sbjct: 308 MPQNDRLGSLAKFKSGIVPILIATDVGSRGLD 339
>gi|198427069|ref|XP_002129152.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
[Ciona intestinalis]
Length = 452
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 83/363 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L+ +++ + L F +PTPIQ CIP QGKD G ++TGSGKT AF LP++Q
Sbjct: 7 FADLGLNEWIIQHLGNLGFNKPTPIQYNCIPPIL-QGKDCFGCSKTGSGKTAAFALPVLQ 65
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E+ P G + L++TPTRELA Q+++ + K IN+R
Sbjct: 66 KLSED-------------------PYG-IFCLVLTPTRELAYQISEQFTLIGKPINIRTS 105
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE- 355
IVGGM +Q L+ +P +V+ TPGRL +L+ E + + F VLDEADR+++
Sbjct: 106 VIVGGMDIIQQAYELQKKPHIVIATPGRLADLLRSNE------NNVKFLVLDEADRLLDK 159
Query: 356 -NGHF-RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+G F +L I LP K+RQTL+FSAT+ + +
Sbjct: 160 LDGDFTNDLNLIFSSLP------------------------KERQTLLFSATLTDTLNEV 195
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
K+L S QS N +++++ L +R +I E +
Sbjct: 196 KELSTKSPFFWQSDNKVSTVDNLDQR-------------------------YILLPEHIR 230
Query: 474 DAYLYYI----LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
D YL YI L ++F + + + LL+ G LH+ M+QR RL
Sbjct: 231 DGYLVYICKDLLEKQPTRSIMIFTKTCKNCQVLGMLLQKAGFQCVVLHSLMKQRERLTAL 290
Query: 530 SQM 532
S+
Sbjct: 291 SRF 293
>gi|380013608|ref|XP_003690844.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Apis
florea]
Length = 452
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 165/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W +L + +L K+ L++K PT IQ IP A +GKD+IG AETGSGKT AF LPI+
Sbjct: 19 TWKDLGIVDILHKACEDLKWKSPTKIQCEAIPLAL-EGKDIIGLAETGSGKTAAFALPIL 77
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LLE P+ + ALI+TPTRELA Q+++ + + I V+
Sbjct: 78 QALLEN-------------------PQRYF-ALILTPTRELAFQISEQFEALGSSIGVKC 117
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q +L +P +++ TPGRL + + + L +L F V+DEADR++
Sbjct: 118 AVIVGGMDMMSQALILAKKPHILIATPGRLVDHLENTKGF--SLRSLKFLVMDEADRILN 175
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P ++R+TL+FSAT+ +K
Sbjct: 176 MDFEVEVDKILRVIP------------------------RERKTLLFSATMTKKV---QK 208
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SL++ V +T+ KL++ +I + KD
Sbjct: 209 LQRASLRNPVKVEVSTKYQTV----------------------EKLQQYYIFIPVKFKDV 246
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL +IL+ ++FC + + LL+ LG LH QM Q R+
Sbjct: 247 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRI 297
>gi|66472376|ref|NP_001018522.1| probable ATP-dependent RNA helicase DDX47 [Danio rerio]
gi|63102032|gb|AAH95776.1| Zgc:112350 [Danio rerio]
Length = 512
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 167/365 (45%), Gaps = 75/365 (20%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
EE V EI T F EL + +L ++ +L +K+PT IQ IP A QG+DVIG AE
Sbjct: 69 EETVTTGEIHTSF---KELGVTEVLCEACDQLGWKKPTKIQIEAIPVAL-QGRDVIGLAE 124
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TGSGKT AF +P++Q LL A L L++TPTRELA Q+
Sbjct: 125 TGSGKTGAFAVPVLQSLL--------------------ACAQRLHTLVLTPTRELAFQIA 164
Query: 282 DHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
+ + I V+ IVGG+ Q +L +P VV+ TPGRL + M + L
Sbjct: 165 EQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLIDHMENTKG--FNLRA 222
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
L + V+DEADR++ E+ I+ ++P + R+T +
Sbjct: 223 LKYLVMDEADRILNMDFESEVDKILKVIP------------------------RDRRTFL 258
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT+ +KL+ +L+ + + + A VD KL
Sbjct: 259 FSATMTKKV---QKLQRAALQD-------------PVKCSVSSKYATVD---------KL 293
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
++ +I + KD YL IL+ +VFC + + ++ LL+ LGI LH QM
Sbjct: 294 QQFYIFIPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMS 353
Query: 522 QRARL 526
Q RL
Sbjct: 354 QNKRL 358
>gi|302804021|ref|XP_002983763.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
gi|300148600|gb|EFJ15259.1| hypothetical protein SELMODRAFT_268770 [Selaginella moellendorffii]
Length = 418
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 164/359 (45%), Gaps = 77/359 (21%)
Query: 179 ELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRL 238
EL + L+ + L + PTP+Q+AC+P +GKDV+G A+TGSGKT AF LPI+QRL
Sbjct: 6 ELGVAEWLVGACKELGMRHPTPVQRACVPQIL-KGKDVLGMAQTGSGKTAAFALPILQRL 64
Query: 239 LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPI 298
E P G + AL++TPTRELA Q++D K + G+++R +
Sbjct: 65 GEN-------------------PYG-IFALVMTPTRELAFQISDQFKALGAGVHLRCAVV 104
Query: 299 VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGH 358
VGGM Q ++L RP VV+ TPGR+ + F VLDEAD +++ G
Sbjct: 105 VGGMDMTTQAQILTERPHVVIATPGRIKAHLGSDPDIAAAFSKTKFLVLDEADLLLDRGF 164
Query: 359 FRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA--LSADFRKKL 416
ELQ+I D + K+RQTL+FSAT+ L A R
Sbjct: 165 QDELQTIFDGIS------------------------KQRQTLLFSATMTGDLQA-LRDLF 199
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
H + Q+ GL ++E+L +R +I + K+ Y
Sbjct: 200 GHRAF-FYQAYEGLKTVESLDQR-------------------------YIFMPGKVKNVY 233
Query: 477 LYYILSVHGQG---RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L Y+L G I+F + +S +L LGI LH+ Q RL +Q
Sbjct: 234 LTYLLENLELGDIRSVIIFVSRCRTCHLLSLILDELGISAVALHSVKTQPQRLAALNQF 292
>gi|224098856|ref|XP_002311293.1| predicted protein [Populus trichocarpa]
gi|222851113|gb|EEE88660.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 179/396 (45%), Gaps = 74/396 (18%)
Query: 134 KKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRL 193
K K+ K +K + +ES + +A N + + +++L L +++ L
Sbjct: 21 KTPKRPKLQKTQNPDESPEIPKLEKEASSNPSNPDSAAAKTTLFSDLGLSEWALQTCKEL 80
Query: 194 QFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKG 253
K PT +Q CIP G+DV+G A+TGSGKT AF LPI+ RL E+
Sbjct: 81 GMKNPTQVQSHCIPKIL-SGRDVLGLAQTGSGKTAAFALPILHRLAED------------ 127
Query: 254 EEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKA 313
P G + AL+ITPTRELA Q+ + + +++R +VGGM Q + L
Sbjct: 128 -------PFG-VFALVITPTRELAYQLAEQFRAFGSCLHLRCAVVVGGMDLLTQAKTLMG 179
Query: 314 RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
RP VV+ TPGR+ L+ + V T F VLDEADR+I+ G EL+ + LP
Sbjct: 180 RPHVVIATPGRIKVLLENPDISPVFSRT-KFLVLDEADRLIDVGFQEELRVVFKCLP--- 235
Query: 374 GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI 433
K RQTL+FSAT+ +L + G ++
Sbjct: 236 ---------------------KSRQTLLFSATMTSELQTLLELSENKAYFYEEYEGFKTV 274
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSV---HGQGRTI 490
+TL+++ +I+ + K+ YL YILS G I
Sbjct: 275 DTLNQQ-------------------------YIQMPKNVKEVYLVYILSKMEEMGIRSAI 309
Query: 491 VFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+F ++ + R +SSLLK L + TL++ Q ARL
Sbjct: 310 IFVSACSTCRLLSSLLKELDHEPATLYSLESQSARL 345
>gi|449481708|ref|XP_002195464.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Taeniopygia
guttata]
Length = 450
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 166/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + +L K+ +L +K PT IQ IP A QG+DVIG AETGSGKT AF LPI+
Sbjct: 25 SFKDLGVTDVLCKACDQLGWKVPTKIQIEAIPVAL-QGRDVIGLAETGSGKTGAFALPIL 83
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LLE ++ L AL++TPTRELA Q+++ + + I V+
Sbjct: 84 QALLETPQR--------------------LFALVLTPTRELAFQISEQFEALGSSIGVQT 123
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGG+ T Q L +P V++ TPGRL + + + L L F V+DEADR++
Sbjct: 124 TVIVGGIDTMSQSLALAKKPHVIIATPGRLVDHLENTKGF--NLRALKFLVMDEADRILN 181
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P + R+T +FSAT+ +K
Sbjct: 182 MDFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---QK 214
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ +LK+ + +T+ KL++ +I + KD+
Sbjct: 215 LQRAALKNPVKCAVSSKYQTV----------------------EKLQQYYIFIPSKFKDS 252
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL YIL+ ++FC++ + + LL+ LG LH QM Q RL
Sbjct: 253 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRL 303
>gi|410901863|ref|XP_003964414.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Takifugu
rubripes]
Length = 471
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 164/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ +L +K PT IQ +P A QGKDVIG AETGSGKT AF LPI+Q
Sbjct: 40 FKDLGVTEVLCEACDQLGWKSPTKIQIEAVPVAL-QGKDVIGLAETGSGKTGAFALPILQ 98
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL A L L++TPTRELA Q+++ + + I V+
Sbjct: 99 SLL--------------------ASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCA 138
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q +L +P +V+ TPGRL + + + L L F V+DEADR++
Sbjct: 139 VIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHLENTKGF--TLRALKFLVMDEADRILNM 196
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P ++R+T +FSAT+ +KL
Sbjct: 197 DFETEVDKILKVIP------------------------RERRTFLFSATMTKKV---QKL 229
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK + + + VD KL++ +I + KD Y
Sbjct: 230 QRAALKD-------------PVKCAVSTKYSTVD---------KLQQYYIFIPSKYKDCY 267
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL+ I+FC++ + ++ LL+ LGI +LH QM Q RL
Sbjct: 268 LVSILNDLAGNSFIIFCSTCNNAQRVALLLRNLGITAISLHGQMSQNKRL 317
>gi|358065451|ref|ZP_09151993.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
gi|356696343|gb|EHI57960.1| hypothetical protein HMPREF9473_04056 [Clostridium hathewayi
WAL-18680]
Length = 534
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 170/349 (48%), Gaps = 67/349 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L PLL+K++ + + +P+PIQ+ IP + +D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FKELNLSPLLLKALEKKGYSQPSPIQEQAIPYVLEK-RDLLGCAQTGTGKTAAFALPIIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E K + K +RALI+TPTRELALQ+ D++K + V+
Sbjct: 62 NLMECPRKRQQ--------------KKPIRALILTPTRELALQIADNIKEYGEYTPVKGT 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+S Q + L+ +++V TPGRL +L+ E ++L + FVLDEADRM++
Sbjct: 108 VIFGGVSAVPQIQDLRKGVDILVATPGRLNDLIGQRE---IDLSYVEIFVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ +I +LP KKRQTL+FSAT+
Sbjct: 165 GFIHDVKKVIALLP------------------------KKRQTLLFSATMP--------- 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I++L+ + + N V++T + + +E S + +K
Sbjct: 192 --------------GEIQSLASK--LLHNPVKVEVTPVSSTVDMIETSLYYVDKANKRKL 235
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L Y+L T+VF + +S L GI+ +H Q AR
Sbjct: 236 LEYLLKHEDITSTLVFTRTKHGADQVSKYLTKAGINAAAIHGDKSQGAR 284
>gi|315641802|ref|ZP_07896806.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
gi|315482477|gb|EFU73016.1| ATP-dependent RNA helicase DeaD [Enterococcus italicus DSM 15952]
Length = 522
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 171/358 (47%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+K++ R F+E TPIQ IP A G+DVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKAVERSGFEEATPIQSETIPLAL-SGRDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ HL+ L+I+PTRELA+Q + L + K VRV+
Sbjct: 62 KI--------------------DTSSSHLQGLVISPTRELAIQTQEELYRLGKDKKVRVM 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLETVETLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI-----ALSAD 411
G +++SII +P T RQTL+FSAT+ ++
Sbjct: 159 GFLEDIESIISKVPST------------------------RQTLLFSATMPPAIKSIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F + +H +K+K+ + A+ +++ ++ K+
Sbjct: 195 FMQNPEHVKIKAKE------------------------------MTADLIDQYYVRSKDF 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + +L V TI+F + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLLDVQTPELTIIFGRTKRRVDELARGLETRGYKAEGIHGDLSQQKRMSVL 282
>gi|367014751|ref|XP_003681875.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
gi|359749536|emb|CCE92664.1| hypothetical protein TDEL_0E04210 [Torulaspora delbrueckii]
Length = 740
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 177/362 (48%), Gaps = 75/362 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+N L L ++K + L + P+PIQ A IP A GKD+I A TGSGKT AF +PI++
Sbjct: 221 FNSLSLSRPVLKGLGDLGYTRPSPIQSATIPIAL-LGKDIIAGAVTGSGKTAAFMIPIIE 279
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL + K A R +++TPTRELA+QV+D K + K ++
Sbjct: 280 RLLYKPAKIAST-----------------RVIVLTPTRELAIQVSDVAKKLGKYVSGLTF 322
Query: 297 PI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ VGG++ +QE+ LKARP++VV TPGR + + V+ ++ V+DEADRM+E
Sbjct: 323 GLAVGGLNLRQQEQSLKARPDIVVATPGRFIDHIRNSASFNVD--SVEVLVIDEADRMLE 380
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G EL I+ +LP KRQTL+FSAT+
Sbjct: 381 EGFQEELNEILSLLP------------------------SKRQTLLFSATM--------- 407
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED--K 473
+ K KQ V +L+ + +R ++D A+KL + F+ ++ D K
Sbjct: 408 ----NSKIKQLV-------SLTLKRPVRV---MIDPPKQA--ASKLTQEFVRIRKRDHLK 451
Query: 474 DAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
+ L+++ L GQ R +VF + +L +LGI V LH + Q RL+ +
Sbjct: 452 PSVLFHLIKKLDGTGQKRMVVFVARKEMAHRLRIILGLLGISVGELHGSLSQEQRLQSVN 511
Query: 531 QM 532
Q
Sbjct: 512 QF 513
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 177/368 (48%), Gaps = 75/368 (20%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+ E + EL L L+K++ +L F +PTPIQ IP A + GKD++ +A TGSGKT A
Sbjct: 185 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALN-GKDILASASTGSGKTAA 243
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F LP+++RLL ++E A +R LI+ PTRELALQ ++ +A+
Sbjct: 244 FLLPVLERLL-------------FRDSEYRA----IRVLILLPTRELALQCQSVMENLAQ 286
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
N+ IVGG+S + QE L+ P+VV+ TPGRL + + H + L L +LDE
Sbjct: 287 FSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNA--HGIGLDDLEILILDE 344
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
ADR+++ G E+ I++ P TN RQT++FSAT+
Sbjct: 345 ADRLLDMGFKDEINKIVESCP-TN-----------------------RQTMLFSATLN-- 378
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANV-AIVDLTNMCVLANKLEESFIEC 468
+ + ++ LS + +R V A++ +T+ LE+ F++
Sbjct: 379 ------------------DEVKTLAKLSLQQPIRVQVDALMQVTST------LEQEFVKI 414
Query: 469 KEE---DKDAYLYYILS-VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
K + D+ A L + + V QG TI+FC S + + + + + LH + Q
Sbjct: 415 KPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQ 474
Query: 525 RLKLFSQM 532
R Q
Sbjct: 475 RFDSLQQF 482
>gi|254578822|ref|XP_002495397.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
gi|238938287|emb|CAR26464.1| ZYRO0B10318p [Zygosaccharomyces rouxii]
Length = 750
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 177/360 (49%), Gaps = 75/360 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
F+ +N L L ++K++ L + P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 236 FNNFNSLSLSRPVLKALGDLGYATPSPIQGATIPIALL-GKDIIAGAVTGSGKTAAFMIP 294
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I++RL+ + K A R +++ PTRELA+QV D K + K +N
Sbjct: 295 IIERLIYKPAKVAST-----------------RVIVLAPTRELAIQVADVGKKLGKYVNG 337
Query: 294 RVVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
I VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 338 LTFGIAVGGLNLRQQEQILKTRPDIVIATPGRFIDHIRNSSSFNVD--SVEVLVIDEADR 395
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G E+ I+ +LP KRQT++FSAT+
Sbjct: 396 MLEEGFQDEINEIMHLLP------------------------SKRQTMLFSATM------ 425
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ K KQ V +LS + +R + D V +KL++ F+ ++ D
Sbjct: 426 -------NSKIKQLV-------SLSLKRPVR---VMTDPPQQAV--SKLQQEFVRIRKRD 466
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
K + L+Y+ L Q R +VF + + + +L +LG+ V LH + Q RL+
Sbjct: 467 HLKPSTLFYLIKKLDGAAQKRMVVFVSKKEMVHRLRIILGLLGMAVAELHGSLNQEQRLQ 526
>gi|260943624|ref|XP_002616110.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849759|gb|EEQ39223.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 477
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 180/380 (47%), Gaps = 79/380 (20%)
Query: 154 SNGPDDAEE-ELVNEA-EISTE-----FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACI 206
S+ PD A++ +V EA E+S F+++ EL+L P L+++I ++F +PTPIQ I
Sbjct: 37 SHKPDQADQASIVPEASEVSVSDGSKRFESFTELKLIPELLEAIQSMKFTKPTPIQAEAI 96
Query: 207 PAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P A +GKDVIG A TGSGKT AF +PI+Q L ++
Sbjct: 97 PHAL-EGKDVIGLAVTGSGKTAAFAIPILQSLWHDQLP--------------------YY 135
Query: 267 ALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLW 326
L+++PTRELA Q+ D + G+ +R IVGGM Q R L +P V+V TPGR+
Sbjct: 136 CLVLSPTRELAYQIKDTFDALGSGMGLRACCIVGGMDMMDQARDLMRKPHVIVATPGRIV 195
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+ + + L L + V+DEADR+++ EL I+ ++P
Sbjct: 196 DHLEHTKG--FSLKNLKYLVMDEADRLLDLDFGPELDKILRVIP---------------- 237
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANV 446
++R T +FSAT+ N IE L +RA + V
Sbjct: 238 --------RERNTYLFSATMT-----------------------NKIEKL-QRASLNNPV 265
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
I +++ A+ L +S + + K+ YL ++L+ I+F + A + + L
Sbjct: 266 RIA-VSSKYQTADNLVQSMMLVSDGYKNTYLVHLLNEFVGKSIIIFTRTCAHSQRTALLA 324
Query: 507 KILGIDVWTLHAQMQQRARL 526
+ILG LH Q+ Q RL
Sbjct: 325 RILGFSAVPLHGQLSQSQRL 344
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 172/379 (45%), Gaps = 79/379 (20%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
SN E+E V E W +L + L K+ L++K PT IQ IP +G
Sbjct: 4 SNPTKQQEQENVKEL-------TWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTL-EG 55
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
KDVIG AETGSGKT AF +PI+Q LLE P+ + ALI+TPT
Sbjct: 56 KDVIGLAETGSGKTAAFAIPILQALLEN-------------------PQRYF-ALILTPT 95
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+++ + + I V+ IVGGM Q LL +P +++ TPGRL + + +
Sbjct: 96 RELAFQISEQFEALGSSIGVKCAVIVGGMDMMSQALLLAKKPHILIATPGRLVDHLENTK 155
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L +L F V+DEADR++ E+ I+ ++P
Sbjct: 156 GF--NLRSLKFLVMDEADRILNMDFEVEVDKILRVIP----------------------- 190
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
++R+TL+FSAT+ +KL+ SL++ V +T+
Sbjct: 191 -RERRTLLFSATMTKKV---QKLQRASLRNPVKVEVSTKYQTVE---------------- 230
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
KL++ +I + KD YL +IL+ ++FC + + LL+ LG
Sbjct: 231 ------KLQQYYIFIPVKFKDVYLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTA 284
Query: 514 WTLHAQMQQRARLKLFSQM 532
LH QM Q R+ ++
Sbjct: 285 VPLHGQMSQNKRIAALTKF 303
>gi|332374708|gb|AEE62495.1| unknown [Dendroctonus ponderosae]
Length = 470
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 169/361 (46%), Gaps = 74/361 (20%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
++ E +++L+L ++K + + K PTPIQ CIP +GK IGAA+TGSGKTLA
Sbjct: 1 MAEELSNFSQLKLQNWIVKQCHSIGVKRPTPIQANCIPKIL-EGKTCIGAAKTGSGKTLA 59
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F LPI+Q+L E+ P G + AL++TP RELA Q+ D + K
Sbjct: 60 FALPIVQKLYED-------------------PYG-IYALVLTPIRELAFQIADQFAILGK 99
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+N+R +VGGM +Q R L P VVV TPGRL + + G + L + F V+DE
Sbjct: 100 PMNMRTCVVVGGMDMVEQGRQLSKVPHVVVATPGRLVDHLEGCDTF--TLSRIKFLVIDE 157
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
ADR++ +++ I +LP K RQ++ FSAT+ +
Sbjct: 158 ADRLLGGLFDDQIKRIFSVLP------------------------KTRQSIYFSATMTDT 193
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
KKL ++E A ++ + V L + ++ C
Sbjct: 194 LQTLKKL-------------------VAEDAFFYEDIG----PSEAVTVAGLTQQYMLCP 230
Query: 470 EEDKDAYLYYILSV----HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
KDAYL +L + + QG ++F + + +S L +G+D LHA + Q R
Sbjct: 231 AYVKDAYLVELLRIFISENDQGTVMIFTNTCKNCQLLSITLNEVGMDNVALHAMIPQAQR 290
Query: 526 L 526
L
Sbjct: 291 L 291
>gi|444318547|ref|XP_004179931.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
gi|387512972|emb|CCH60412.1| hypothetical protein TBLA_0C06160 [Tetrapisispora blattae CBS 6284]
Length = 757
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 175/358 (48%), Gaps = 75/358 (20%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +PI
Sbjct: 236 NTFNTLSLSRPVLKGLAALGYSKPSPIQSAAIPIALL-GKDIIAGAVTGSGKTAAFMIPI 294
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN-V 293
++RLL K AK+ R +++TPTRELA+QV+D K V K +N V
Sbjct: 295 IERLLY---KPAKVT--------------STRVIVLTPTRELAIQVSDVGKKVGKFVNGV 337
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
VGG++ +QE+ LK+RP++VV TPGR + + V+ ++ V+DEADRM
Sbjct: 338 TFGLAVGGLNLRQQEQQLKSRPDIVVATPGRFIDHIRNSASFNVD--SVEILVIDEADRM 395
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 396 LEDGFQDELNEIMSLLP------------------------SKRQTLLFSATM------- 424
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED- 472
+ K KQ + +LS + +R ++D A KL + F+ ++ D
Sbjct: 425 ------NSKIKQLI-------SLSLKKPVRI---MIDPPKQA--AAKLVQEFVRIRKRDN 466
Query: 473 -KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A LY + L GQ R +VF + +L +LG V LH + Q RL
Sbjct: 467 LKPALLYTLIRKLDGAGQKRIVVFVARKETAHKLRIILGLLGQSVGELHGSLTQEQRL 524
>gi|365156794|ref|ZP_09353090.1| hypothetical protein HMPREF1015_01991 [Bacillus smithii 7_3_47FAA]
gi|363626851|gb|EHL77816.1| hypothetical protein HMPREF1015_01991 [Bacillus smithii 7_3_47FAA]
Length = 473
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 171/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KSI +L F+E TPIQ A IP + GKD+IG A+TG+GKT AFG+P+M+
Sbjct: 4 FVELGLSPALLKSIDQLGFEEATPIQAATIPKSL-DGKDLIGQAQTGTGKTAAFGIPLME 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + H++ +II PTRELA+QV++ L + VR++
Sbjct: 63 KIDTKNH--------------------HIQGMIIAPTRELAIQVSEELYKIGYHKRVRIL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG ++Q R LK +P V+VGTPGR+ + ++ L LHTL VLDEAD M+
Sbjct: 103 AVYGGQDIQRQIRALKKQPHVIVGTPGRILDHINRQTLKLDHLHTL---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++++I+ +P K+RQTL+FSAT+
Sbjct: 160 GFIQDIETILSHMP------------------------KERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I ++E+ + V M V ++E+ FI+ +E +K
Sbjct: 187 --------------EPIRAIAEKFMKNPELVQVKAKEMTV--PQIEQYFIKIQEREKFDV 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L V IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LSRLLDVQSPELAIVFGRTKRRVDELTRALTLRGYSAEGIHGDLSQMKRLNVLKKF 286
>gi|322796322|gb|EFZ18887.1| hypothetical protein SINV_00745 [Solenopsis invicta]
Length = 420
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 171/359 (47%), Gaps = 76/359 (21%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + L+L+ L+ + K+PTPIQ+ CIP G+D IG A+TGSGKTLAF L
Sbjct: 4 EVKDFLHLKLNSWLLAQCKSMGLKKPTPIQENCIPRIL-MGEDCIGCAKTGSGKTLAFAL 62
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q+L E+ P G + AL++TPTRELA Q+ D + K IN
Sbjct: 63 PILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQFAAIGKVIN 102
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++ IVGGM Q L RP +VV TPGRL + + L + F VLDEADR
Sbjct: 103 LKKCVIVGGMDMMIQGLELSKRPHIVVATPGRLADHLDSCNTF--SLQKIKFLVLDEADR 160
Query: 353 MIENGHF-RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
++ GHF ++L+ I +LP K++Q L FSAT+ + D
Sbjct: 161 LL-GGHFDKQLKKIFAVLP------------------------KQKQILFFSATMTDTLD 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
KK+ N + T E+ A +A V +L++ ++ C ++
Sbjct: 196 KVKKM------------ACNKVFTWQEKDD--AGIATV---------KELDQRYVLCPKD 232
Query: 472 DKDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D+YL ++ + + G ++F + + +S L +G LHA ++Q+ RL
Sbjct: 233 VLDSYLVEVIRTFRTTNKNGCIMIFTDTCKNCQLLSMTLNDVGFTNVALHAMLKQKERL 291
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 167/370 (45%), Gaps = 72/370 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE +E+ ++ ++ E L +++ + + F PTPIQ+ IP A GKD++G+A
Sbjct: 300 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 358
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKT AF +PI++RLL K R I+ PTRELA+Q
Sbjct: 359 VTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQC 401
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 402 YNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD-- 459
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 460 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 495
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ + D ++ GLN L A + N A+
Sbjct: 496 LFSATMTDTVDKLIRV------------GLNRPVRLMVDA--KKNTAVT----------- 530
Query: 461 LEESFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
L + F+ +E+ + YL Y+ GR IVF + + +LG+ LH
Sbjct: 531 LVQEFVRLRPGREDKRLGYLLYLCKELYTGRVIVFFRQKKEAHRVRIIFGLLGLKAAELH 590
Query: 518 AQMQQRARLK 527
M Q R+K
Sbjct: 591 GSMSQEQRIK 600
>gi|320168199|gb|EFW45098.1| DEAD box polypeptide 49 [Capsaspora owczarzaki ATCC 30864]
Length = 611
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 174/383 (45%), Gaps = 78/383 (20%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
+++T F A L L L+K + K PT IQ I G++VIG A+TGSGKT
Sbjct: 175 QVNTTFAA---LGLKQWLVKQCEAMGLKHPTDIQVNTIKHVL-AGRNVIGCAKTGSGKTA 230
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
AF LPI+ RL ++ Y P A+++TPTRELA Q+ + + +
Sbjct: 231 AFALPILHRLSDD----------------PYGP----FAVVLTPTRELAFQIAEQFRALG 270
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
KGIN+R +VGG+ +Q +L RP V++ TPGRL + ++ + + L F VLD
Sbjct: 271 KGINLREAVVVGGVDMMQQSLVLAKRPHVIIATPGRLADHLNSNSQ--LSLARARFLVLD 328
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++E G +L I+ ++ +RQTL+FSATI
Sbjct: 329 EADRLLEEGFSPDLNRIL-----------------------AAASNPQRQTLLFSATI-- 363
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ ++E++S +NV + + L++ F+
Sbjct: 364 ------------------TKNIANLESMS-----MSNVVHYETKSSVATVTTLDQRFVIT 400
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL-- 526
+ KD YL Y+L H IVF +S I+ ++K LG LH++M Q RL
Sbjct: 401 PAKVKDCYLSYLLGQHEDKSIIVFTSSCRNCETITRMIKALGFRCVALHSEMSQSMRLGS 460
Query: 527 --KLFSQMITWIRKRPKGDRGKD 547
K S ++ + RG D
Sbjct: 461 LAKFKSSIVNILIATDVASRGLD 483
>gi|145353647|ref|XP_001421118.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581354|gb|ABO99411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 755
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 171/379 (45%), Gaps = 73/379 (19%)
Query: 161 EEELVNEAEISTEFDA--WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
E +V A+ T FDA ++EL L L ++ L +K+PTPIQ A IP A G+DV G
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIA-MTGRDVCG 190
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKT AF LP ++R+L + P L++ PTRELA+
Sbjct: 191 RAVTGSGKTAAFMLPQLERMLHRGPR----------------PAAATHVLVLVPTRELAV 234
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
QV + +A+ +R V +VGG+S Q L+ RPE+VV TPGR+ + + H
Sbjct: 235 QVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRN--THSFG 292
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L+ +LDEADR++E G E++ I+ P KKRQ
Sbjct: 293 LEDLATLILDEADRLLEMGFLEEIKEIVRQCP------------------------KKRQ 328
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
TL+FSAT+ G+ ++ +LS + N A + +
Sbjct: 329 TLLFSATL--------------------TAGVEALASLSMK-----NPARLSADTLGTTP 363
Query: 459 NKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+L E ++ K K+A+L I+S TI+F + + ++ + I
Sbjct: 364 KRLVEEVLKLKPNQSAQKEAFLMAIVSRSYDKSTIIFSQTKQEAHRLKIIMGLSDIKAGE 423
Query: 516 LHAQMQQRARLKLFSQMIT 534
LH M Q RL + T
Sbjct: 424 LHGDMTQTQRLAALDEFRT 442
>gi|403347561|gb|EJY73206.1| ATP-dependent RNA helicase DDX24 [Oxytricha trifallax]
Length = 780
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 128/199 (64%), Gaps = 17/199 (8%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQ-KACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W + + L +S+ QF +PT +Q ++ + AH D++ AA+TG GKTL FG+PI+
Sbjct: 35 WMQFDMSEELAESLVANQFVQPTDVQAQSLVFLNAHV--DMVIAAKTGQGKTLTFGIPIL 92
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK---GIN 292
L++ ++++D+ E E++ ++ALI++PTRELA+Q+ DH++ V
Sbjct: 93 DLLIK------RLIKDQSGEPEEFT---SIKALIMSPTRELAIQIKDHIQAVVPVQYQNK 143
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE--LHTLSFFVLDEA 350
+++ P+VGGMS +KQERLL P +V+ TPGRLWEL++ ++ L + VLDEA
Sbjct: 144 IKLCPLVGGMSIQKQERLLSYNPTIVIATPGRLWELLNERMNPYLQSALPMIDVLVLDEA 203
Query: 351 DRMIENGHFRELQSIIDML 369
DRMIE+GHF+E++ I+D +
Sbjct: 204 DRMIEDGHFKEMKYILDYV 222
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 398 QTLVFSATIALSADFR-------KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA-IV 449
Q ++ SAT+ + R K LK G K + ++++E L + R ++
Sbjct: 355 QHIICSATMTIDPTGRITPKKAKKILKSGHNKPE----AVDTLEQLCKTLRFRTKTPKVI 410
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
DLT + L+E ++C++++KD Y+YY + I+F SI + +SSLL L
Sbjct: 411 DLTEEERMPETLKEYALKCEQKEKDLYVYYFMKQKMGESCIIFSNSITCTKRVSSLLTFL 470
Query: 510 GIDVWTLHAQMQQRARLK 527
I LH++MQQR RLK
Sbjct: 471 KIPNHCLHSKMQQRQRLK 488
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 167/370 (45%), Gaps = 72/370 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE +E+ ++ ++ E L +++ + + F PTPIQ+ IP A GKD++G+A
Sbjct: 295 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 353
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKT AF +PI++RLL K R I+ PTRELA+Q
Sbjct: 354 VTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQC 396
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 397 YNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD-- 454
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 455 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 490
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ + D ++ GLN L A + N A+
Sbjct: 491 LFSATMTDTVDKLIRV------------GLNRPVRLMVDA--KKNTAVT----------- 525
Query: 461 LEESFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
L + F+ +E+ + YL Y+ GR IVF + + +LG+ LH
Sbjct: 526 LVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRIIFGLLGLKAAELH 585
Query: 518 AQMQQRARLK 527
M Q R+K
Sbjct: 586 GSMSQEQRIK 595
>gi|357459393|ref|XP_003599977.1| ATP-dependent RNA helicase [Medicago truncatula]
gi|355489025|gb|AES70228.1| ATP-dependent RNA helicase [Medicago truncatula]
Length = 828
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 133/239 (55%), Gaps = 48/239 (20%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
D++ +L L L+++ L + +PTPIQ ACIP A G+D+ G+A TGSGKT AF LP
Sbjct: 151 DSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFALPT 209
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL + PK +R LI+TPTRELA QV +K +++ +
Sbjct: 210 LERLL-------------------FRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFTD 250
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+ST++QE L++RP++VV TPGR+ + + V+L LS +LDEADR
Sbjct: 251 IRCCLIVGGLSTKEQEVALRSRPDIVVATPGRMIDHLRNSMS--VDLDDLSVLILDEADR 308
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
++E G E+Q ++ + P KKRQT++FSAT+ D
Sbjct: 309 LLELGFSAEIQELVRVCP------------------------KKRQTMLFSATMTEEVD 343
>gi|19113586|ref|NP_596794.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654494|sp|Q9HGM5.1|DBP8_SCHPO RecName: Full=ATP-dependent RNA helicase dbp8
gi|9929273|emb|CAC05248.1| ATP-dependent RNA helicase Dbp8 (predicted) [Schizosaccharomyces
pombe]
Length = 453
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 180/354 (50%), Gaps = 66/354 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++++L + P L+ ++ L EPT IQ+ I A +G++ IG A+TGSGKT AF LPI+
Sbjct: 8 SFSDLGISPWLIDTLKALAIYEPTDIQEGVI-AQILEGRNCIGGAKTGSGKTAAFALPII 66
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ ++ P G + ALI+TPTRELA+Q+ + + +N++
Sbjct: 67 EKWSKD-------------------PSG-IFALILTPTRELAIQIDEQFAALGANLNLKH 106
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM-SGGEKHLVELHTLSFFVLDEADRMI 354
IVGGM +Q L RP VVV TPGRL +L+ S GE+ + L + F V+DEADR++
Sbjct: 107 ALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLL 166
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+L +LP + + RQTL+F+AT+ D +
Sbjct: 167 SPTFADDLDDCFSVLPAS----------------------EDRQTLLFTATV---TDAIR 201
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+LK+ K+ + L +ET N+++ + L++S+I + ++
Sbjct: 202 QLKYQPQKNNKPPLWLYEVET--------DNISV---------PSTLQQSYIFVSSQVRE 244
Query: 475 AYLYYILSV--HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
AYL ++L++ + + I+F I S+L++L + V LH++M QR R+
Sbjct: 245 AYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERI 298
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 168/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + L ++ L +K PT IQ+ IP A QG+D+I A+TGSGKT +F LPI+
Sbjct: 14 SFEDLGISEQLAETCRALGWKHPTDIQQESIPWAL-QGRDLIALAKTGSGKTGSFALPII 72
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+ LL+ P + A++I+PTRELA Q+ +H + + KGI ++
Sbjct: 73 EALLKN-------------------PAPYF-AVVISPTRELASQIEEHFQALGKGIGLKT 112
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
V ++GG+ Q R+L P V+VGTPGRL ++ + L + + VLDEADR++
Sbjct: 113 VSVIGGIDEVTQMRMLAKTPHVIVGTPGRLLYMLQNMKG--FSLRNIKYLVLDEADRLLH 170
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
++L I+++LP ++RQT +FSAT+ +K
Sbjct: 171 EDFEKQLDQILEVLP------------------------RERQTFLFSATMTSKV---QK 203
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SL+ V + T+ + L++ ++ KD
Sbjct: 204 LQRASLRDPIKVEVASKYSTV----------------------DTLKQQYMFVPHMHKDT 241
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+L+ TIVFC + + + I +L+ LG +H QM Q RL
Sbjct: 242 YLAYLLNELAGNTTIVFCCTCSNAQRICIILRSLGFKALVIHGQMSQNKRL 292
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 167/370 (45%), Gaps = 72/370 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE +E+ ++ ++ E L +++ + + F PTPIQ+ IP A GKD++G+A
Sbjct: 268 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 326
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKT AF +PI++RLL K R I+ PTRELA+Q
Sbjct: 327 VTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQC 369
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 370 YNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD-- 427
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 428 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 463
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ + D ++ GLN L A + N A+
Sbjct: 464 LFSATMTDTVDKLIRV------------GLNRPVRLMVDA--KKNTAVT----------- 498
Query: 461 LEESFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
L + F+ +E+ + YL Y+ GR IVF + + +LG+ LH
Sbjct: 499 LVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRIIFGLLGLKAAELH 558
Query: 518 AQMQQRARLK 527
M Q R+K
Sbjct: 559 GSMSQEQRIK 568
>gi|430813904|emb|CCJ28790.1| unnamed protein product [Pneumocystis jirovecii]
Length = 464
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 173/355 (48%), Gaps = 66/355 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ E LH L++++ ++ K+PT IQ CI +G++ IG+A+TGSGKT+AF LPI+
Sbjct: 43 TFKECGLHAWLIETLKKVSIKKPTAIQATCI-GPILEGQNCIGSAKTGSGKTMAFTLPII 101
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L ++ P G + ALI+TPTRELALQ++D L + IN++
Sbjct: 102 QILSQD-------------------PYG-VFALILTPTRELALQISDQLAIIGTSINLKH 141
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
I+GG+ Q +L RP +V+ TPGRL + + S G++ + + F VLDEADR++
Sbjct: 142 TTIIGGVDMITQALILVKRPHIVIATPGRLADHIRSSGQETINAFKRVRFLVLDEADRLL 201
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+++Q I +LP + + RQTL+F+ATI
Sbjct: 202 TPNFSKDMQECIRILP----------------------KAENRQTLLFTATIT------- 232
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+ + ++T S +G + + + + + L +++I K+
Sbjct: 233 -------------DAIRKLQTQSSESGKKPLFLYNVIKSSVTIPSSLIQTYIFIPSHVKE 279
Query: 475 AYLYYILSV--HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
YLY I + + + TIVF + + IL + V LH++M Q+ R++
Sbjct: 280 TYLYRIFNTQEYKEKSTIVFTNRTRTAELLCRMFCILELKVTALHSEMPQKKRIQ 334
>gi|242784404|ref|XP_002480380.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720527|gb|EED19946.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces stipitatus
ATCC 10500]
Length = 538
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 185/403 (45%), Gaps = 71/403 (17%)
Query: 133 KKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYR 192
KKK I +EE V+ + D + + L + P L+KS+
Sbjct: 75 KKKSNVTSSSNIPQIEEPVSSRDARDIG---------LQVTDSTFANLNVAPWLVKSLST 125
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
+ + PT IQK+CIP QGKD IG + TGSGKT+AF +PI+Q+ E+
Sbjct: 126 MAIRRPTAIQKSCIPEIL-QGKDCIGGSRTGSGKTIAFAVPILQKWAED----------- 173
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P G + A+++TPTRELALQ+ + K ++ +++ V I GG Q L
Sbjct: 174 --------PFG-IFAVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGTDMRPQAIALS 224
Query: 313 ARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
RP V++ TPGRL + + + GE +V L+ + V+DEADR++ +GH MLP
Sbjct: 225 QRPHVIIATPGRLADHIRTSGEDTIVGLNRVRMIVMDEADRLLTSGHG-------SMLP- 276
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN 431
+ C++ +RQTL+F+AT+ V L
Sbjct: 277 ----------DVETCLSALP-PSSERQTLLFTATVT-----------------PEVRALK 308
Query: 432 SIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR--T 489
S+ + R + +V + N+ + L++++++ ++A+L+ +LS G
Sbjct: 309 SVPRPANRPPI--HVTEIGTENIAPIPPTLKQTYLQVPMTHREAFLHVLLSTEGNSSKPA 366
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
I+FC + +L+ L V +LH+ + Q R S+
Sbjct: 367 IIFCNRTKTADLLERMLRRLSHRVTSLHSLLPQSERTANLSRF 409
>gi|119496543|ref|XP_001265045.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
gi|143462290|sp|A1D405.1|RRP3_NEOFI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119413207|gb|EAW23148.1| ATP-dependent RNA helicase , putative [Neosartorya fischeri NRRL
181]
Length = 472
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 166/351 (47%), Gaps = 71/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + L ++ + +K PTPIQ IP A QG+D+IG AETGSGKT AF LPI+
Sbjct: 53 SFKDLGIIDQLCEACETMGYKAPTPIQAESIPLAL-QGRDLIGLAETGSGKTAAFALPIL 111
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L+E+ P+ LI+ PTRELA Q++ + + INVR
Sbjct: 112 QALMEK-------------------PQSFF-GLILAPTRELAFQISKSFESLGSTINVRC 151
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q L +P ++V TPGRL + + + L TL + V+DEADR+++
Sbjct: 152 AVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKG--FSLRTLKYLVMDEADRLLD 209
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
L I+ +LP ++R+T +FSAT++
Sbjct: 210 MDFGPLLDKILKVLP------------------------RERRTFLFSATMS-------- 237
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ +E+L +RA + + + +N + L +S++ + KD
Sbjct: 238 ---------------SKVESL-QRASLSNPLRVSVSSNKYQTVSTLLQSYLFLPHKHKDI 281
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+L+ I+F ++ + IS LL+ LG LH Q+ Q ARL
Sbjct: 282 YLVYLLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARL 332
>gi|146413022|ref|XP_001482482.1| hypothetical protein PGUG_05502 [Meyerozyma guilliermondii ATCC
6260]
Length = 475
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 181/393 (46%), Gaps = 76/393 (19%)
Query: 134 KKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRL 193
KK K+ K+ E+ + +A +++ +E +F + EL L P LM++I +L
Sbjct: 27 KKNALKQKKQAPVTEKPEEIVETTSEASQDVNSE----QQFHTFLELNLVPELMEAIEKL 82
Query: 194 QFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKG 253
++ +PTPIQ IP A +GKD+IG A+TGSGKT AF +PI+Q L E +
Sbjct: 83 KYTKPTPIQSGAIPHAL-EGKDIIGLAQTGSGKTAAFAIPILQSLWEAQRP--------- 132
Query: 254 EEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKA 313
AL++ PTRELA Q+ + + G+ VR V IVGGM Q R L
Sbjct: 133 -----------YYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMR 181
Query: 314 RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
+P ++V TPGR+ + + + L +L + V+DEADR+++ L I+ ++P
Sbjct: 182 KPHILVATPGRIMDHLENTKG--FSLKSLQYLVMDEADRLLDMDFGPALDKILKVIP--- 236
Query: 374 GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI 433
KR T +FSAT+ N I
Sbjct: 237 ---------------------TKRTTYLFSATMT-----------------------NKI 252
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFC 493
L +RA + V + ++N A+ L +S + + K+ +L ++L+ IVF
Sbjct: 253 AKL-QRASLHEPVKVA-VSNKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFT 310
Query: 494 TSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ A + + L +ILG LH Q+ Q RL
Sbjct: 311 RTCAHTQRSTLLARILGFSAVPLHGQLTQSQRL 343
>gi|365984639|ref|XP_003669152.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
gi|343767920|emb|CCD23909.1| hypothetical protein NDAI_0C02490 [Naumovozyma dairenensis CBS 421]
Length = 771
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 174/357 (48%), Gaps = 75/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +PI+
Sbjct: 250 SFNTLSLSRPVLKGLANLGYNKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIPII 308
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RLL K AK+ R +++TPTRELA+Q+ D K + K +N
Sbjct: 309 ERLL---FKPAKV--------------SSTRVIVLTPTRELAIQIADVAKKIGKFVNGLT 351
Query: 296 VPI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADRM+
Sbjct: 352 FGLAVGGLNLRQQEQILKQRPDIVIATPGRFIDHVRNSASFNVD--SVEILVMDEADRML 409
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E G EL I+ +LP KRQT++FSAT+
Sbjct: 410 EEGFQEELNEIMQLLPT------------------------KRQTMLFSATM-------- 437
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED-- 472
+ K KQ +N LS + +R + + A+KL + F+ + D
Sbjct: 438 -----NSKIKQLIN-------LSLKKPVR-----IMINPPKQAASKLTQEFVRIRTRDHL 480
Query: 473 KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L + Q R +VF + +L +LG++V LH + Q RL
Sbjct: 481 KPALLFNLIKKLDEYSQKRMVVFVARKETAHKLRIILGLLGMNVAELHGSLTQEQRL 537
>gi|313892323|ref|ZP_07825915.1| DEAD-box ATP-dependent RNA helicase CshA [Dialister microaerophilus
UPII 345-E]
gi|313119182|gb|EFR42382.1| DEAD-box ATP-dependent RNA helicase CshA [Dialister microaerophilus
UPII 345-E]
Length = 491
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 171/359 (47%), Gaps = 73/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ + EL L +MK++ + F+EP+PIQK IP A QGKD+IG A+TG+GKT AFG+P
Sbjct: 2 YETFKELGLSEEIMKAVADMGFEEPSPIQKEAIPIAM-QGKDLIGQAQTGTGKTAAFGIP 60
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I+QR+ + K P+ A++++PTRELA+Q + + +A+ +N+
Sbjct: 61 ILQRI----------------DTSKPGPQ----AIVLSPTRELAIQSAEEINHLAQYMNI 100
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ +PI GG E+Q R LK +P ++V TPGRL + M ++ ++L + VLDE D M
Sbjct: 101 KTIPIYGGQDIERQFRALKKKPNIIVATPGRLMDHM---KRKTIDLSNVQIAVLDEGDEM 157
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++++I+ P K+RQTL FSAT + A R
Sbjct: 158 VDMGFIDDIRTIMAATP------------------------KERQTLFFSAT--MPAPIR 191
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+ NS E ++A +DL +E+ +IE + K
Sbjct: 192 EL--------------ANSFLNEPEIVKIKAATVTIDL---------IEQEYIELPDRQK 228
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + ++ LK LH + Q+ R + Q
Sbjct: 229 FDALCRLLDMQSPELAIVFVRTKRRADEVTEALKKRAYSAEGLHGDLSQQKRDSVIRQF 287
>gi|238501386|ref|XP_002381927.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|220692164|gb|EED48511.1| ATP-dependent RNA helicase , putative [Aspergillus flavus NRRL3357]
gi|391863856|gb|EIT73155.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 472
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 188/399 (47%), Gaps = 76/399 (19%)
Query: 133 KKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFD-----AWNELRLHPLLM 187
KK+K ++ + + + +S A S+ +DA + + +E ++ EL L L
Sbjct: 5 KKRKIAREAPQQEDLSDSEAHSSASEDAAPNTTEQEQEPSEAPKQAPKSFKELGLIEQLC 64
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAK 247
++ + +K PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q L+++
Sbjct: 65 EACDSMGYKAPTAIQAEAIPLAL-QGRDLIGLAETGSGKTAAFALPILQALMDK------ 117
Query: 248 MLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQ 307
P L++ PTRELA Q++ +G+ I+VR +VGGM Q
Sbjct: 118 -------------PSSFF-GLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQ 163
Query: 308 ERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 367
L +P ++V TPGRL + + + L L + V+DEADR+++ L I+
Sbjct: 164 SIALGKKPHIIVATPGRLLDHLENTKG--FSLRNLKYLVMDEADRLLDMDFGPILDKILK 221
Query: 368 MLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSV 427
+LP ++R+T +FSAT++
Sbjct: 222 VLP------------------------RERRTYLFSATMS-------------------- 237
Query: 428 NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
+ +E+L +RA ++ + + ++ + L++S+I + KD YL Y+L+
Sbjct: 238 ---SKVESL-QRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQ 293
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
I+FC ++ + +S L++LG LH Q+ Q ARL
Sbjct: 294 SCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARL 332
>gi|148232160|ref|NP_001084651.1| uncharacterized protein LOC414610 [Xenopus laevis]
gi|46249606|gb|AAH68844.1| MGC81500 protein [Xenopus laevis]
Length = 317
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 173/370 (46%), Gaps = 75/370 (20%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
P+D + L N E E + +L + +L ++ +L +K+PT IQ IP A QG+D+
Sbjct: 4 PEDEHDVLENAEE---EQKTFRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMAL-QGRDI 59
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
IG AETGSGKT AF LPI+Q LLE ++ L AL++TPTREL
Sbjct: 60 IGLAETGSGKTGAFALPILQTLLESPQR--------------------LYALVLTPTREL 99
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A Q+++ + + I V+ IVGG+ Q L +P VV+ TPGRL + + +
Sbjct: 100 AFQISEQFEAIGSSIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGF- 158
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
L L + V+DEADR++ E+ I+ ++P +
Sbjct: 159 -NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RD 193
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
R+T +FSAT+ +KL+ +LK + +T+
Sbjct: 194 RKTFLFSATMTKKV---QKLERAALKDPVKCAVSSKYQTV-------------------- 230
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
KL++ ++ + KD+YL YIL+ ++FC++ + ++ LL+ LG L
Sbjct: 231 --EKLQQFYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPL 288
Query: 517 HAQMQQRARL 526
H QM Q RL
Sbjct: 289 HGQMSQNKRL 298
>gi|46116372|ref|XP_384204.1| hypothetical protein FG04028.1 [Gibberella zeae PH-1]
gi|91207782|sp|Q4IFI0.1|RRP3_GIBZE RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 486
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 168/350 (48%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L ++ L ++ +L +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LP++Q
Sbjct: 62 FKDLGVNDALCEACEKLNYKYPTPIQEKSIPVAL-QGRDIIGLAETGSGKTAAFALPVLQ 120
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL++ + L L++ PTRELA Q+ + + I++R
Sbjct: 121 ALLDKPQP--------------------LFGLVLAPTRELATQIGQAFEALGSLISLRCA 160
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P +VV TPGRL + + + L TL + ++DEADR+++
Sbjct: 161 VIVGGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGF--SLRTLKYLIMDEADRLLDM 218
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ I+ +P ++R+T +FSATI+
Sbjct: 219 DFGPSIDKILKFVP------------------------RERRTYLFSATIS--------- 245
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ IE+L +RA +R V + +N + L ++++ KD +
Sbjct: 246 --------------SKIESL-QRASLRDPVKVSISSNKYQTVSTLLQNYLFIPHPQKDVH 290
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+++ H TIVF ++ + +S LL+ LG LH Q+ Q +RL
Sbjct: 291 LIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRL 340
>gi|410078383|ref|XP_003956773.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
gi|372463357|emb|CCF57638.1| hypothetical protein KAFR_0C06420 [Kazachstania africana CBS 2517]
Length = 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 80/384 (20%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
E+VA P++ E+ + + +N L L ++K + L F +P+PIQ A IP
Sbjct: 193 EAVAEYFAPEEEAEDAKKQTHTT-----FNTLNLSRPVLKGLSSLGFTKPSPIQSATIPI 247
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A GKD++ A TGSGKT AF +PI++RLL + K A R +
Sbjct: 248 AL-LGKDIVAGAVTGSGKTAAFMIPIIERLLYKPAKVAST-----------------RVV 289
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWE 327
I+TPTRELA+Q++D K + +N + VGG++ +QE++LK+RP++V+ TPGR +
Sbjct: 290 ILTPTRELAIQISDVAKKIGHFVNGLTFGLAVGGLNLRQQEQILKSRPDIVIATPGRFID 349
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ V+ + VLDEADRM+E G EL I+ +LP
Sbjct: 350 HVRNSASFSVD--RVEILVLDEADRMLEEGFQDELSEIMTLLPT---------------- 391
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
+RQ L+FSAT+ + K KQ V +LS + +R
Sbjct: 392 --------RRQNLLFSATM-------------NSKIKQLV-------SLSLKKPVR---I 420
Query: 448 IVDLTNMCVLANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHI 502
++D A++L + F+ ++ D K A LY + L GQ R +VF + +
Sbjct: 421 MIDPPKQA--ADRLVQEFVRIRKRDHLKPALLYNLIRKLDSTGQKRIVVFVSRKEVAHRL 478
Query: 503 SSLLKILGIDVWTLHAQMQQRARL 526
+L +LG+ V LH + Q RL
Sbjct: 479 RIILGLLGMGVAELHGSLSQEQRL 502
>gi|170583206|ref|XP_001896476.1| ATP-dependent RNA helicase T26G10.1 in chromosome III [Brugia
malayi]
gi|158596304|gb|EDP34674.1| ATP-dependent RNA helicase T26G10.1 in chromosome III, putative
[Brugia malayi]
Length = 462
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 167/350 (47%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ RL +K+PT +Q A +P A + +D+IG AETGSGKT AF +PI+Q
Sbjct: 26 FQKLGVTDVLCEACDRLNWKKPTKVQIAALPHA-FKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE +K L AL++TPTRELA Q+ + + + I + +
Sbjct: 85 ALLETPQK--------------------LFALVLTPTRELAFQIGEQFEALGASIGILIA 124
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ T Q L RP V+V TPGRL + + + L L + V+DEADR++
Sbjct: 125 VIVGGVDTVTQSLALAKRPHVIVATPGRLVDHLENTKGF--NLRALKYLVMDEADRILNM 182
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
EL+ I+ ++P K+R+T ++SAT+ KL
Sbjct: 183 DFEVELEKILKVIP------------------------KERRTYLYSATMTKKV---AKL 215
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL + + +T+ +KL++ +I + K+AY
Sbjct: 216 ERASLNDPVRIEVSSKYQTV----------------------DKLKQYYIFIPYKYKEAY 253
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ IVFC++ A+ + +L+ LG LH QM Q RL
Sbjct: 254 LIYILNEMAGQTAIVFCSTCASALKTALMLRKLGFGAVPLHGQMSQAKRL 303
>gi|302792278|ref|XP_002977905.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
gi|300154608|gb|EFJ21243.1| hypothetical protein SELMODRAFT_107914 [Selaginella moellendorffii]
Length = 741
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 202/427 (47%), Gaps = 89/427 (20%)
Query: 107 DGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVN 166
D D DG+E+ Q ++++ + +K++ ++ K++ D+++E
Sbjct: 56 DVDQDGEEENHDEQGEKDRGQDSTDEDEKEQLDHSQRKKSL-----------DSKKEKFF 104
Query: 167 EAEISTEFDA--WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+ F+A + EL + L+++ L +++PTPIQ ACIP A G+D+ G+A TGS
Sbjct: 105 SSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLAL-AGRDICGSAVTGS 163
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTD 282
GKT AF LPI++RLL + P+ +R LIITPTRELA+Q+
Sbjct: 164 GKTAAFALPILERLL-------------------FRPRRIPAIRVLIITPTRELAVQLHS 204
Query: 283 HLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
++ +A+ ++R +VGG+S++ QE L+ P++VV TPGR+ + + + V L L
Sbjct: 205 MIEKLAQFTDIRCCLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQS--VGLEEL 262
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVF 402
+ VLDEADR++E G E+ ++ + P +RQT++F
Sbjct: 263 AILVLDEADRLLELGFREEIHELVKLCP------------------------SRRQTMLF 298
Query: 403 SATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLE 462
SAT+ D +L SLKS ++ S E S L
Sbjct: 299 SATM---TDEVSELIKLSLKSPVRLSADPSTERPS----------------------TLT 333
Query: 463 ESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
E I + EEDK+A + + S + +TI+F + + L + G+ LH
Sbjct: 334 EEVIRIRAGHEEDKEAIVLSLCSRSLKSKTIIFSGTKVEAHRLKILFGLSGLKSAELHGN 393
Query: 520 MQQRARL 526
+ Q RL
Sbjct: 394 LTQAQRL 400
>gi|50286247|ref|XP_445552.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661437|sp|Q6FW42.1|DRS1_CANGA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49524857|emb|CAG58463.1| unnamed protein product [Candida glabrata]
Length = 725
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 175/357 (49%), Gaps = 75/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+N+L L +MK + L + +P+PIQ A IP A GKD+I A TGSGKT AF +PI+
Sbjct: 207 TFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIPII 265
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVR 294
+RLL + K A R +++TPTRELA+QV D K + + + N+
Sbjct: 266 ERLLYKPAKVAST-----------------RVIVLTPTRELAIQVADVGKKIGQFVSNLT 308
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
VGG++ +QE++LK RP++V+ TPGR + + V+ ++ V+DEADRM+
Sbjct: 309 FGLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNVD--SVEVLVIDEADRML 366
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 367 EDGFQDELNEIMSLLP------------------------SKRQTLLFSATM-------- 394
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED-- 472
+ + KQ + +LS + +R ++D A KL + F+ ++ D
Sbjct: 395 -----NSRIKQLI-------SLSLKRPVRI---MIDPPKQA--ATKLTQEFVRIRKRDHL 437
Query: 473 KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K + L+ + L +GQ R +VF + +L +LG+ V LH + Q RL
Sbjct: 438 KPSLLFNLIRKLDPNGQKRIVVFVARKDMAHKLRIILGLLGMAVAELHGSLTQEQRL 494
>gi|145357256|ref|XP_001422836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583080|gb|ABP01195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 710
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 171/379 (45%), Gaps = 73/379 (19%)
Query: 161 EEELVNEAEISTEFDA--WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
E +V A+ T FDA ++EL L L ++ L +K+PTPIQ A IP A G+DV G
Sbjct: 132 ERAVVKGAKGDTTFDAKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIA-MTGRDVCG 190
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKT AF LP ++R+L + P L++ PTRELA+
Sbjct: 191 RAVTGSGKTAAFMLPQLERMLHRGPR----------------PAAATHVLVLVPTRELAV 234
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
QV + +A+ +R V +VGG+S Q L+ RPE+VV TPGR+ + + H
Sbjct: 235 QVHQMTESLAQFTTIRAVLVVGGLSANVQAAALRTRPEIVVATPGRVIDHVRN--THSFG 292
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L+ +LDEADR++E G E++ I+ P KKRQ
Sbjct: 293 LEDLATLILDEADRLLEMGFLEEIKEIVRQCP------------------------KKRQ 328
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
TL+FSAT+ G+ ++ +LS + N A + +
Sbjct: 329 TLLFSATL--------------------TAGVEALASLSMK-----NPARLSADTLGTTP 363
Query: 459 NKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
+L E ++ K K+A+L I+S TI+F + + ++ + I
Sbjct: 364 KRLVEEVLKLKPNQSAQKEAFLMAIVSRSYDKSTIIFSQTKQEAHRLKIIMGLSDIKAGE 423
Query: 516 LHAQMQQRARLKLFSQMIT 534
LH M Q RL + T
Sbjct: 424 LHGDMTQTQRLAALDEFRT 442
>gi|242045284|ref|XP_002460513.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
gi|241923890|gb|EER97034.1| hypothetical protein SORBIDRAFT_02g029690 [Sorghum bicolor]
Length = 760
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 161/302 (53%), Gaps = 49/302 (16%)
Query: 107 DGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVN 166
D +G GDE+ SG ++ +E E G + +++ + + + E S GP D + +
Sbjct: 118 DIEGSGDEEASGDREGDEDGSDEEGGSELGEEEDAHEEEDMAEQNDTS-GPVDPSKFFAS 176
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
S +++ EL L L+++ L +++PTPIQ ACIP A G+D+ G+A TGSGK
Sbjct: 177 SEGASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TGRDICGSAITGSGK 235
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHL 284
T AF LP+++RLL + PK +R LI+TPTRELA QV +
Sbjct: 236 TAAFSLPVLERLL-------------------FRPKRVPAIRVLILTPTRELAAQVHSMI 276
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
+ +A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + + V L L+
Sbjct: 277 EKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLS--VGLEDLAV 334
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
+LDEADR++E G E+Q +I M P K+RQT++FSA
Sbjct: 335 VILDEADRLLELGFSAEIQELIRMCP------------------------KRRQTMLFSA 370
Query: 405 TI 406
T+
Sbjct: 371 TM 372
>gi|339243967|ref|XP_003377909.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
gi|316973226|gb|EFV56846.1| ATP-dependent rRNA helicase Rrp3 [Trichinella spiralis]
Length = 496
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 163/343 (47%), Gaps = 72/343 (20%)
Query: 184 PLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEERE 243
P+L ++ +L + +PT +Q IP A QG+DVIG AETGSGKT AF LPI+Q LLE +
Sbjct: 71 PVLCEACKQLNWTDPTKVQIEAIPLAL-QGRDVIGLAETGSGKTAAFALPILQALLEHPQ 129
Query: 244 KAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMS 303
+ L AL++TPTRELA Q+ + + + I ++V IVGG+
Sbjct: 130 R--------------------LFALVLTPTRELAYQIAEQFEALGACIGIKVAVIVGGVD 169
Query: 304 TEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 363
Q L +P V+V TPGRL + + + L +L + V+DEADR+++ E+
Sbjct: 170 MVTQALCLAKKPHVIVATPGRLVDHLENTKGF--SLRSLKYLVMDEADRILDMDFESEVN 227
Query: 364 SIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS 423
I+ ++P ++R+T +FSAT+ KL+ SL+
Sbjct: 228 KILQVIP------------------------RERKTYLFSATMTKKV---TKLQRASLQD 260
Query: 424 KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSV 483
V + +T+ +KL++ +I ++ KD YL YIL+
Sbjct: 261 PVKVEVSSKYQTV----------------------DKLQQHYIFIPQKFKDCYLVYILNE 298
Query: 484 HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
IVF ++ A + LL+ LG LH QM Q RL
Sbjct: 299 MAGKSCIVFTSTCANSLRTALLLRNLGFTAVPLHGQMSQAKRL 341
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 157/339 (46%), Gaps = 72/339 (21%)
Query: 185 LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK 244
+L ++ +L +K PT IQ IP A QGKDVIG AETGSGKT AF LPI+Q LL
Sbjct: 5 VLCEACDQLGWKSPTKIQIEAIPVAL-QGKDVIGLAETGSGKTGAFALPILQSLL----- 58
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMST 304
A L L++TPTRELA Q+++ + + I V+ IVGG+
Sbjct: 59 ---------------ASPQRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDM 103
Query: 305 EKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
Q +L +P +V+ TPGRL + + + L + F V+DEADR++ E+
Sbjct: 104 MSQSLVLAKKPHIVIATPGRLIDHLENTKG--FSLRAVKFLVMDEADRILNMDFETEVDK 161
Query: 365 IIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK 424
I+ ++P ++R+T +FSAT+ +KL+ +LK
Sbjct: 162 ILKVIP------------------------RERRTFLFSATMTKKV---QKLQRAALKD- 193
Query: 425 QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH 484
+ + VD KL++ +I + KD YL IL+
Sbjct: 194 ------------PVKCAVSTKYTTVD---------KLQQYYIFIPSKYKDCYLVSILNDL 232
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
I+FC++ + ++ LL+ LGI LH QM QR
Sbjct: 233 AGNSFIIFCSTCNNAQRVALLLRNLGITAIPLHGQMSQR 271
>gi|409082704|gb|EKM83062.1| hypothetical protein AGABI1DRAFT_33446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200570|gb|EKV50494.1| hypothetical protein AGABI2DRAFT_64060 [Agaricus bisporus var.
bisporus H97]
Length = 453
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 158/347 (45%), Gaps = 72/347 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++S+ +L FK PT IQ +P A +G+D+IG A TGSGKT AFGLPI+Q+L EE
Sbjct: 28 LLESLEQLNFKIPTEIQVEALPHAL-EGRDIIGVAATGSGKTAAFGLPILQKLWEE---- 82
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A ++ PTRELA Q++ L+ + + R IVGGM
Sbjct: 83 ---------------PKG-LFACVLAPTRELAYQISQQLESLGSAMGARCAVIVGGMDMP 126
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP +VV TPGRL + + + L + F VLDEADR+++ + I
Sbjct: 127 AQAIALAKRPHIVVATPGRLMDHLEKTKGF--NLRNIKFLVLDEADRLLDLDFGTIIDKI 184
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P K+R T +FSAT+ KL+ SL +
Sbjct: 185 LKLIP------------------------KERTTYLFSATMTTKV---AKLQRASLSNPV 217
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V +T+S L + ++ +DKDAYL Y+ +
Sbjct: 218 RVEVSTKYQTVS----------------------TLLQYYLLMPLKDKDAYLVYLANTLA 255
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
Q I+F ++ +S +L+ LG LH Q+ Q RL Q
Sbjct: 256 QNSIIIFTRTVHDASRLSIILRTLGFPAVPLHGQLSQSQRLGALGQF 302
>gi|322795370|gb|EFZ18163.1| hypothetical protein SINV_10215 [Solenopsis invicta]
Length = 410
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 72/347 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L K+ L++KEPT IQ+ IP QGKDVIG AETGSGKT AF LPI+Q LLE+
Sbjct: 6 LCKTCIDLKWKEPTRIQQEAIPLTL-QGKDVIGLAETGSGKTAAFALPILQALLEQ---- 60
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
P+ + ALI+TPTRELA Q+++ + + V+ V +VGGM
Sbjct: 61 ---------------PQRYF-ALILTPTRELAFQISEQFDALGSSMGVKTVVLVGGMDMH 104
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q +L+ +P +++ TPGRL + + + L L F V+DEADR++ E+ I
Sbjct: 105 AQGMILEKKPHIIIATPGRLVDHLENTKGF--NLRQLKFLVMDEADRILNMDFEVEVDKI 162
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P ++R+TL+FSAT+ +KL+ SL++
Sbjct: 163 LRVIP------------------------RERRTLLFSATMTKKV---QKLQRASLRNPV 195
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V +T+ KL++ +I + KD YL +IL+
Sbjct: 196 RVEVSTKYQTVE----------------------KLQQYYIFIPVKFKDVYLVHILNELA 233
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++FC + + LL+ LG LH QM Q R+ ++
Sbjct: 234 GNSFMIFCGTCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKF 280
>gi|449017072|dbj|BAM80474.1| DEAD box protein [Cyanidioschyzon merolae strain 10D]
Length = 453
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 181/369 (49%), Gaps = 62/369 (16%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
N+ +T ++ L + +L + L ++EPTPIQ+ IPAA GKD++G A+TGSG
Sbjct: 10 NQVAPTTGESSFAALGVCAVLCDACRLLNYREPTPIQREAIPAAL-AGKDIVGLAQTGSG 68
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KT AF +PI+Q LLE+ P+ + AL+++PTRELA Q+++
Sbjct: 69 KTAAFAIPILQFLLED-------------------PRPYF-ALVLSPTRELAFQISEQFL 108
Query: 286 GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
+ I VRV +VGGM Q L RP VVVGTPGR+ + ++ + L +
Sbjct: 109 ALGSEIGVRVATLVGGMDMVGQAVTLAKRPHVVVGTPGRVVDHLTATKGF--TLKHVRIL 166
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGS-NKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
VLDEADR++ EL I+ +P ++ +KG++ R+T +FSA
Sbjct: 167 VLDEADRLLNMDFEEELDQILAAVPRSDADPSKGET--------------FARKTYLFSA 212
Query: 405 TIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEES 464
T+ KL+ SL+SK++V R + A + V+ L +
Sbjct: 213 TMTSQV---AKLQRASLRSKETV-----------RIEVSAKYSTVE---------TLVQH 249
Query: 465 FIECKEEDKDAYLYYIL-SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
++ E+ KD YL Y+ + + IVF + ++ + ++ +L+ LG +H M Q
Sbjct: 250 YLFIPEKYKDCYLTYLFEELVARHSCIVFTDTQSSAQRLALMLRNLGYGAVCIHGGMSQP 309
Query: 524 ARLKLFSQM 532
RL +Q
Sbjct: 310 NRLGALNQF 318
>gi|157138136|ref|XP_001664143.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869558|gb|EAT33783.1| AAEL013950-PA [Aedes aegypti]
Length = 495
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 186/404 (46%), Gaps = 82/404 (20%)
Query: 123 EEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRL 182
EE+N N + ++ G ++ ++S NG D+EE+ +W ++ L
Sbjct: 15 EEENQVNADSDSNESQQNGVSSESDDDSDNNKNGNADSEEKQA----------SWEDMGL 64
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
L ++ L++K P+ IQ+ IP A QGKDVIG AETGSGKT AF LPI+Q LLE
Sbjct: 65 IDTLCEACRALKWKAPSKIQREAIPLAL-QGKDVIGLAETGSGKTGAFALPILQALLEN- 122
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGM 302
P+ + A+I+TPTRELA Q+++ + + I ++ IVGGM
Sbjct: 123 ------------------PQRYF-AVILTPTRELAYQISEQFEALGASIGIKCCVIVGGM 163
Query: 303 STEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 362
Q L +P +++ TPGRL + + + L + + V+DEADR++ EL
Sbjct: 164 DMVSQALHLARKPHIIIATPGRLVDHLENTKG--FNLKAVKYLVMDEADRILNLDFEVEL 221
Query: 363 QSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 422
+ I+ ++P ++R+T +FSAT+ KKL+ SLK
Sbjct: 222 EKILKVIP------------------------RERRTFLFSATMTKKV---KKLERASLK 254
Query: 423 SKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILS 482
V + +T+ KL + +I + KD YL +IL+
Sbjct: 255 DPVKVEVSSKYQTVE----------------------KLLQYYIFIPAKYKDVYLVHILN 292
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++FC++ + +L+ LG+ LH QM Q RL
Sbjct: 293 ELAGNSFMIFCSTCNNTVRTALMLRALGLAAVPLHGQMSQNKRL 336
>gi|67527984|ref|XP_661837.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|74681080|sp|Q5B5E7.1|RRP3_EMENI RecName: Full=ATP-dependent rRNA helicase rrp3
gi|40740142|gb|EAA59332.1| hypothetical protein AN4233.2 [Aspergillus nidulans FGSC A4]
gi|259481158|tpe|CBF74430.1| TPA: ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B5E7] [Aspergillus
nidulans FGSC A4]
Length = 465
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 181/394 (45%), Gaps = 73/394 (18%)
Query: 133 KKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYR 192
KK+K +K + + E+ +VS+ A++E E ++ EL + L ++
Sbjct: 5 KKRKITEKQPETNSDSEAESVSSR-GSAKDETQTSGEEPAPAKSFKELGIIDQLCEACEN 63
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
+ +K PTPIQ IP A +G+DVIG AETGSGKT AF LP++Q L+E
Sbjct: 64 MGYKAPTPIQSQAIPLAL-EGRDVIGLAETGSGKTAAFALPMLQALME------------ 110
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
AP+ L L++ PTRELA Q++ + + I VR IVGGM Q L
Sbjct: 111 -------APQ-TLFGLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALG 162
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L L + +DEADR+++ L II +LP T
Sbjct: 163 KKPHIIVATPGRLLDHLENTKG--FSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRT 220
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
R T +FSAT++ + L+ SL + V+ +
Sbjct: 221 ------------------------RHTYLFSATMSTKVE---SLQRASLSNPVRVSVSSK 253
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+T+S L+ S+I + K+ YL Y+L+ I+F
Sbjct: 254 YQTVS----------------------TLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIF 291
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
T++ + ++ +L+ LG LH Q+ Q ARL
Sbjct: 292 TTTVHETQRVAFMLRALGFGAIPLHGQLSQSARL 325
>gi|336471127|gb|EGO59288.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2508]
gi|350292214|gb|EGZ73409.1| ATP-dependent rRNA helicase rrp-3 [Neurospora tetrasperma FGSC
2509]
Length = 515
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 178/381 (46%), Gaps = 79/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
T E+SV + P+ E E V + + +L + L ++ RL +K PTPIQ+
Sbjct: 69 TEEDSVTLDVAPEQEEVETVKKT--------FKDLGIVDALCEACERLGYKNPTPIQEQS 120
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A Q +D+IG AETGSGKT AF LPI+Q LL+ K AP L
Sbjct: 121 IPLAL-QNRDIIGIAETGSGKTAAFALPILQALLD-----------------KPAP---L 159
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
AL++ PTRELA Q+ + + I++R I+GGM Q L +P V+V TPGRL
Sbjct: 160 FALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRL 219
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L ++ + V+DEADR+++ L+ I+ LP
Sbjct: 220 LDHLEKTKG--FSLRSMQYLVMDEADRLLDMDFGPILEKILKFLP--------------- 262
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + +E+L +RA +R
Sbjct: 263 ---------RERRTFLFSATMS-----------------------SKVESL-QRASLRDP 289
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
+ + +N + L+ +++ KD YL Y+ + I+F ++ + I+ L
Sbjct: 290 LKVSVSSNKYATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAIL 349
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ LG+ LH + Q ARL
Sbjct: 350 LRTLGMGAIPLHGGLSQSARL 370
>gi|402590562|gb|EJW84492.1| DEAD box ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 462
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 167/350 (47%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ RL +K+PT +Q A +P A + +D+IG AETGSGKT AF +PI+Q
Sbjct: 26 FQKLGVTDVLCEACDRLNWKKPTKVQIAALPHA-FKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE +K L AL++TPTRELA Q+ + + + I + +
Sbjct: 85 ALLETPQK--------------------LFALVLTPTRELAFQIGEQFEALGASIGILIA 124
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ T Q L RP V+V TPGRL + + + L L + V+DEADR++
Sbjct: 125 VIVGGIDTVTQSLALAKRPHVIVATPGRLVDHLENTKGF--NLRALKYLVMDEADRILNM 182
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
EL+ I+ ++P K+R+T ++SAT+ KL
Sbjct: 183 DFEVELEKILKVIP------------------------KERRTYLYSATMTKKV---AKL 215
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL + + +T+ +KL++ +I + K+AY
Sbjct: 216 ERASLVDPVRIEVSSKYQTV----------------------DKLKQYYIFIPYKYKEAY 253
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ IVFC++ A+ + +L+ LG LH QM Q RL
Sbjct: 254 LIYILNEMAGQTAIVFCSTCASALKTALMLRKLGFGAVPLHGQMSQAKRL 303
>gi|85082449|ref|XP_956915.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
gi|74662479|sp|Q7RY59.1|RRP3_NEUCR RecName: Full=ATP-dependent rRNA helicase rrp-3
gi|28917996|gb|EAA27679.1| ATP-dependent rRNA helicase RRP3 [Neurospora crassa OR74A]
Length = 515
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 178/381 (46%), Gaps = 79/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
T E+SV + P+ E E V + + +L + L ++ RL +K PTPIQ+
Sbjct: 69 TEEDSVTLDVAPEQEEVETVKKT--------FKDLGIVDALCEACERLGYKNPTPIQEQS 120
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A Q +D+IG AETGSGKT AF LPI+Q LL+ K AP L
Sbjct: 121 IPLAL-QNRDIIGIAETGSGKTAAFALPILQALLD-----------------KPAP---L 159
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
AL++ PTRELA Q+ + + I++R I+GGM Q L +P V+V TPGRL
Sbjct: 160 FALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPHVIVATPGRL 219
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L ++ + V+DEADR+++ L+ I+ LP
Sbjct: 220 LDHLEKTKG--FSLRSMQYLVMDEADRLLDMDFGPILEKILKFLP--------------- 262
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + +E+L +RA +R
Sbjct: 263 ---------RERRTFLFSATMS-----------------------SKVESL-QRASLRDP 289
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
+ + +N + L+ +++ KD YL Y+ + I+F ++ + I+ L
Sbjct: 290 LKVSVSSNKYATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRTVLETQRIAIL 349
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ LG+ LH + Q ARL
Sbjct: 350 LRTLGMGAIPLHGGLSQSARL 370
>gi|15896262|ref|NP_349611.1| ATP-dependent RNA [Clostridium acetobutylicum ATCC 824]
gi|337738217|ref|YP_004637664.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
gi|384459728|ref|YP_005672148.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|15026068|gb|AAK80951.1|AE007798_3 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis
ortholog [Clostridium acetobutylicum ATCC 824]
gi|325510417|gb|ADZ22053.1| ATP-dependent RNA helicase (superfamily II) [Clostridium
acetobutylicum EA 2018]
gi|336293434|gb|AEI34568.1| ATP-dependent RNA helicase [Clostridium acetobutylicum DSM 1731]
Length = 528
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 173/350 (49%), Gaps = 70/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++L+L+ ++K+I + F+EP+ IQ IP G D+IG A+TG+GKT+AFG PI+
Sbjct: 6 FSDLKLNSSVLKAIDDMGFEEPSKIQAEAIPVVI-DGYDMIGQAQTGTGKTVAFGAPIIS 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EK ++A+I+TPTRELA+Q+TD L ++K VRV+
Sbjct: 65 KIKDIDEKEG------------------VQAIILTPTRELAIQITDELTRLSKYARVRVL 106
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG S E+Q R +K +V+V TPGR+ M ++ V+L + F VLDEAD M++
Sbjct: 107 PIYGGQSIERQMRAIKRGVDVIVATPGRI---MDHIKRKTVKLDKVKFLVLDEADEMLDM 163
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II N S RQT++FSAT+ KKL
Sbjct: 164 GFIDDIEGII-----KNISGD-------------------RQTMLFSATMPAPI---KKL 196
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K + ++AI+ + ++++ + E K +DK
Sbjct: 197 ASNYMKKEVK------------------HIAII---KNSLTVERIQQFYFEVKNKDKFEA 235
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L I+ V TI+FC + + + ++ G +V +H M Q R+
Sbjct: 236 LCRIIDVEEPETTIIFCRTKRGVDELVESMQFRGYNVEGMHGDMSQNQRI 285
>gi|342218233|ref|ZP_08710855.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
gi|341590668|gb|EGS33904.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
Length = 515
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 173/359 (48%), Gaps = 71/359 (19%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ + L + +++++ + F+EPTPIQ IP A QG+D+IG A+TG+GKT AFG+P
Sbjct: 2 LEKFQNLNISTTILQALNTMGFEEPTPIQAEAIPVAL-QGQDMIGQAQTGTGKTAAFGIP 60
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+++++L + + +++ ++++PTRELA+QV + L +A+ ++
Sbjct: 61 VLEKILASSKTS------------------NVQTIVLSPTRELAMQVAEELNHLAQYTSI 102
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ +PI GG E+Q R L+ P+++V TPGRL + M G HL E+ T+ VLDEAD M
Sbjct: 103 QALPIYGGQDMERQLRRLRKHPQIIVATPGRLIDHMKRGTIHLDEISTI---VLDEADEM 159
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++ +I+ P T RQTL+FSAT+
Sbjct: 160 LDMGFIDDIHTIMSATPET------------------------RQTLLFSATMPAPI--- 192
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+KL LK Q + M+A +DL +E+S+IE + K
Sbjct: 193 QKLAQTFLKDPQIIR-------------MKAKEVTMDL---------IEQSYIETPDRQK 230
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + I+F + + +S LK G +H + Q R + Q
Sbjct: 231 FDVLCRLLDLQEPDLAIIFVRTKRRVDELSEALKKRGYSSEGIHGDLTQAKRDSVIRQF 289
>gi|156844737|ref|XP_001645430.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
gi|160380651|sp|A7TJM9.1|DRS1_VANPO RecName: Full=ATP-dependent RNA helicase DRS1
gi|156116092|gb|EDO17572.1| hypothetical protein Kpol_534p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 752
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 172/363 (47%), Gaps = 75/363 (20%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
ST +N L L ++K + L + +P+PIQ A IP GKD+I A TGSGKT AF
Sbjct: 227 STVHSTFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGL-SGKDIIAGAVTGSGKTAAF 285
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
+PI++RLL + K A R +++TPTRELA+Q+ D K + K
Sbjct: 286 MIPIIERLLYKPAKVAST-----------------RVIVLTPTRELAIQIADVGKKIGKY 328
Query: 291 INVRVVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
++ + VGG++ +QE+ LK RP++V+ TPGR + + V+ ++ V+DE
Sbjct: 329 VSGLTFGLAVGGLNLRQQEQELKTRPDIVIATPGRFIDHVRNSSSFNVD--SVEVLVMDE 386
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
ADRM+E G EL I+ +LP KRQTL+FSAT+
Sbjct: 387 ADRMLEEGFQEELNEILTLLP------------------------SKRQTLLFSATMN-- 420
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
+ + S+ +LS R +R + + A +L + F+ +
Sbjct: 421 ------------------SRIKSLISLSLRKPVR-----IMINPPKQAAARLTQEFVRIR 457
Query: 470 EED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
+ D K A L+Y+ L GQ R +VF + +L +LG+ V LH + Q
Sbjct: 458 KRDHLKPALLFYLIRKLDGTGQKRIVVFVARKEMAHKLRIILGLLGMKVGELHGSLTQEQ 517
Query: 525 RLK 527
RL+
Sbjct: 518 RLQ 520
>gi|367007110|ref|XP_003688285.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
gi|357526593|emb|CCE65851.1| hypothetical protein TPHA_0N00700 [Tetrapisispora phaffii CBS 4417]
Length = 755
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 174/364 (47%), Gaps = 79/364 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+N L L ++K + L + +P+PIQ A IP GKD+I A TGSGKT AF +PI++
Sbjct: 222 FNTLSLSRPVLKGLSDLGYTKPSPIQSATIPIGLL-GKDIIAGAVTGSGKTAAFMIPIIE 280
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINVR 294
RLL Y P R +++TPTRELA+QV+D K + K +N
Sbjct: 281 RLL-------------------YKPANIASTRVIVLTPTRELAIQVSDVGKRIGKYVNGL 321
Query: 295 VVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ VGG++ +QE+ LK RP+VV+ TPGR + + V+ ++ V+DEADRM
Sbjct: 322 TFGLAVGGLNLRQQEQELKTRPDVVIATPGRFIDHIRNSASFNVD--SVEVLVIDEADRM 379
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +LP KRQTL+FSAT+
Sbjct: 380 LEDGFQEELNEIMSLLPT------------------------KRQTLLFSATM------- 408
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED- 472
+ K KQ + +LS R +R + + A +L + F+ ++ D
Sbjct: 409 ------NSKIKQLI-------SLSLRRPVR-----IMINPPKQAAARLTQEFVRIRKRDL 450
Query: 473 -KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKL 528
K A LYY+ L Q R +VF + + ++ +LG+ V LH + Q RL+
Sbjct: 451 LKPALLYYLIRKLDSSSQKRIVVFVSRKEMAHRLRIIMGLLGMKVAELHGSLTQEQRLQS 510
Query: 529 FSQM 532
+Q
Sbjct: 511 VNQF 514
>gi|393910350|gb|EFO27145.2| Ddx49-A-prov protein [Loa loa]
Length = 509
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 174/373 (46%), Gaps = 80/373 (21%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
A L + IS E ++EL L L + L PTP+Q CIP G DV+G
Sbjct: 29 ASSSLAKKGNISKE-TTFSELGLSKWLCNQVRHLAMNTPTPVQVNCIPHIL-AGSDVLGC 86
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
A+TG+GKTLAFGLPI+ L + P G + AL++TPTRELA+Q
Sbjct: 87 AKTGTGKTLAFGLPILHELAID-------------------PYG-ICALVLTPTRELAIQ 126
Query: 280 VTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
+ D + I +++ +VGG Q L RP +VV TPGRL + + ++ +L
Sbjct: 127 IGDQFAALGTPIGLKIGIVVGGKDRVAQGNDLARRPHIVVATPGRLADHLESDSENTGKL 186
Query: 340 H-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L F VLDEADR+++ + EL++I++ LP K+RQ
Sbjct: 187 FKKLRFLVLDEADRLLDGQYSIELKTILNFLP------------------------KQRQ 222
Query: 399 TLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
TL+FSATI ALS +L S+K ++ +A VD
Sbjct: 223 TLLFSATITSALS-----QLHQVSVKKPYFFED-------------KSEIATVD------ 258
Query: 457 LANKLEESFIECKEEDKDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGID 512
KLE+ ++ C KDAYL Y++ H ++F + + ++ + LG
Sbjct: 259 ---KLEQKYVLCPCAVKDAYLVYVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGLGFQ 315
Query: 513 VWTLHAQMQQRAR 525
V +LH+Q+ Q+ R
Sbjct: 316 VGSLHSQISQQER 328
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 72/357 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
W +L + L K+ L++K PT IQ IP +GKD+IG AETGSGKT AF +PI+
Sbjct: 24 TWKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTL-EGKDIIGLAETGSGKTAAFAIPIL 82
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LLE P+ + ALI+TPTRELA Q+++ + + I V+
Sbjct: 83 QALLEN-------------------PQRYF-ALILTPTRELAFQISEQFEALGSSIGVKC 122
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q LL +P +++ TPGRL + + + L +L F V+DEADR++
Sbjct: 123 AVIVGGMDMMSQALLLAKKPHILIATPGRLVDHLENTKGF--NLRSLKFLVMDEADRILN 180
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P ++R+TL+FSAT+ +K
Sbjct: 181 MDFEVEVDKILRVIP------------------------RERRTLLFSATMTKKV---QK 213
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SL++ V +T+ KL++ ++ + KD
Sbjct: 214 LQRASLRNPVKVEVSTKYQTVE----------------------KLQQYYVFIPVKFKDV 251
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
YL +IL+ ++FC + + LL+ LG LH QM Q R+ ++
Sbjct: 252 YLVHILNELAGNSFMIFCATCNNTVRTALLLRNLGFTAVPLHGQMSQNKRIAALTKF 308
>gi|448090292|ref|XP_004197032.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|448094692|ref|XP_004198063.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359378454|emb|CCE84713.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
gi|359379485|emb|CCE83682.1| Piso0_004267 [Millerozyma farinosa CBS 7064]
Length = 500
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 193/414 (46%), Gaps = 79/414 (19%)
Query: 116 GSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEE---SVAVSNGPDDAEEELVNEAEIST 172
S +++++EK ++ KK+K +K +K + EE + A + D ++E V E+++
Sbjct: 31 ASAMKQKQEKEEESRMAKKQKSAEKQEKREKREERSKNEAKQDSEDTSKEVTVEESKV-- 88
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
++++EL L P L+++I ++F +PTPIQ IP A +GKD+IG A+TGSGKT AF +
Sbjct: 89 --ESFSELNLIPELLETINEMKFTKPTPIQAEAIPHAL-EGKDIIGLAQTGSGKTAAFAI 145
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q L + + L++ PTRELA Q+ + + +
Sbjct: 146 PILQSL--------------------WDAQTPYFGLVLAPTRELAYQIKETFDALGSSMG 185
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R V IVGGM Q R L RP ++V TPGR+ + + + L L + V+DEADR
Sbjct: 186 LRTVCIVGGMDMMDQARDLMRRPHILVATPGRIMDHLEHTKG--FSLKNLKYLVMDEADR 243
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ L I+ ++P +R T +FSAT+ +
Sbjct: 244 LLDMDFGPALDKILKVIPT------------------------QRTTYLFSATMTSKVE- 278
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
KL+ SL N V ++ A+ L +S + +
Sbjct: 279 --KLQRASLH----------------------NPVKVAVSTKYQTADNLVQSMMLVSDGY 314
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ YL ++L+ IVF + A + S L +ILG LH Q+ Q RL
Sbjct: 315 KNTYLIHLLNEFVGKSIIVFTRTCAHSQRTSLLARILGFSAVPLHGQLSQSQRL 368
>gi|50311527|ref|XP_455788.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660268|sp|Q6CJV1.1|DRS1_KLULA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49644924|emb|CAG98496.1| KLLA0F15752p [Kluyveromyces lactis]
Length = 748
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 173/360 (48%), Gaps = 81/360 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+N L L ++K + L + P+PIQ A IP A GKD+I A TGSGKT AF +PI++
Sbjct: 235 FNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALL-GKDIIAGAVTGSGKTAAFMIPIIE 293
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHL---RALIITPTRELALQVTDHLKGVAKGINV 293
RLL Y P H+ R +++TPTRELA+QV D K + K +N
Sbjct: 294 RLL-------------------YKP-AHIASTRVVVLTPTRELAIQVADVGKNIGKFVNG 333
Query: 294 RVVPI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE+ LK RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 334 LTFGLAVGGLNLRQQEQALKTRPDIVIATPGRFIDHLRNSASFSVD--SVEILVIDEADR 391
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G ELQ I+ ++P KRQTL+FSAT+
Sbjct: 392 MLEEGFQEELQEIMSLIP------------------------SKRQTLLFSATM------ 421
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ K KQ + +LS + +R ++D A+KL + FI ++ D
Sbjct: 422 -------NSKIKQLI-------SLSLKKPVRI---MIDPPKQA--ADKLTQEFIRIRKRD 462
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
K A LY + L Q R +VF + +L +LG+ V LH + Q RL+
Sbjct: 463 HLKPALLYQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLLGMQVGELHGSLTQEQRLQ 522
>gi|321466431|gb|EFX77426.1| hypothetical protein DAPPUDRAFT_213372 [Daphnia pulex]
Length = 478
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 162/361 (44%), Gaps = 76/361 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+N L++ L+K I L +PTP+Q CIPA G+D IG TGSGKT AF LPI+
Sbjct: 10 TFNSLKIDEWLIKQIKNLGVDKPTPVQINCIPAIL-DGRDCIGCDRTGSGKTFAFALPIV 68
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L ++ P G + AL++TPTRELA Q+ D + + K IN+R+
Sbjct: 69 QTLSKD-------------------PYG-IYALVLTPTRELAYQIADQFQIIGKPINLRM 108
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q L P +V+ TPGRL + + + T+ + V+DEADR++E
Sbjct: 109 SVIVGGMGMMDQGIELSNHPHIVIATPGRLADHLESCKTF--SFKTIKYLVMDEADRLLE 166
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+LQ I LP +KRQTL+FSATI D K
Sbjct: 167 GNFDEQLQIIFQALP------------------------EKRQTLLFSATI---TDTLNK 199
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ +L + T+ E L++ +I + KD
Sbjct: 200 LREVALNKPFMWSAPVETATVEE----------------------LDQRYILVPADFKDG 237
Query: 476 YLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQ 531
YL +++ + G IVF + + + +S L LG LH+ M QR R+ ++
Sbjct: 238 YLVHVVQNFREEKPKGSIIVFTDTCRSCQILSMTLLELGFQSLCLHSMMSQRERIATLTK 297
Query: 532 M 532
Sbjct: 298 F 298
>gi|301610482|ref|XP_002934775.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + +L ++ +L +K+PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q
Sbjct: 21 FRELGVTDVLCETCEQLGWKQPTKIQIEAIPVAL-QGRDIIGLAETGSGKTGAFALPILQ 79
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE ++ L AL++TPTRELA Q+++ + + I V+
Sbjct: 80 TLLESPQR--------------------LYALVLTPTRELAFQISEQFEALGSTIGVKSA 119
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P VV+ TPGRL + + + L L + V+DEADR++
Sbjct: 120 VIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGF--NLRALKYLVMDEADRILNM 177
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P + R+T +FSAT+ +KL
Sbjct: 178 DFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---QKL 210
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK + +T+ KL++ ++ + KD+Y
Sbjct: 211 QRAALKDPVKCAVSSKYQTV----------------------EKLQQFYVFIPSKFKDSY 248
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ ++FC++ + ++ LL+ LG LH QM Q RL
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQNKRL 298
>gi|408395320|gb|EKJ74502.1| hypothetical protein FPSE_05252 [Fusarium pseudograminearum CS3096]
Length = 487
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 167/350 (47%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L ++ L ++ +L +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LP++Q
Sbjct: 62 FKDLGVNDALCEACEKLNYKYPTPIQEQSIPVAL-QGRDIIGLAETGSGKTAAFALPVLQ 120
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL++ + L L++ PTRELA Q+ + + I++R
Sbjct: 121 ALLDKPQP--------------------LFGLVLAPTRELATQIGQAFEALGSLISLRCA 160
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P ++V TPGRL + + + L TL + ++DEADR+++
Sbjct: 161 VIVGGLDMVPQSIALGKKPHIIVATPGRLVDHLEKTKGF--SLRTLKYLIMDEADRLLDM 218
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ I+ +P ++R+T +FSATI+
Sbjct: 219 DFGPSIDKILKFVP------------------------RERRTYLFSATIS--------- 245
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ IE+L +RA +R V + +N + L + ++ KD +
Sbjct: 246 --------------SKIESL-QRASLRDPVKVSISSNKYQTVSTLLQHYLFIPHPQKDVH 290
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+++ H TIVF ++ + +S LL+ LG LH Q+ Q +RL
Sbjct: 291 LIYLINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRL 340
>gi|266619246|ref|ZP_06112181.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
gi|288869241|gb|EFD01540.1| ATP-dependent RNA helicase RhlE [Clostridium hathewayi DSM 13479]
Length = 432
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 175/356 (49%), Gaps = 67/356 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L L+K++ + P+PIQ+ IP GKDV+G A+TG+GKT AF LPI+Q
Sbjct: 3 FKDLQLSAPLLKALEEKGYTTPSPIQEKAIPHVL-AGKDVLGCAQTGTGKTAAFALPIIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+ +K K++ K +R+LI+TPTRELALQ+ ++ K VR
Sbjct: 62 NLMRPSDK-------------KHS-KRVIRSLILTPTRELALQIAENFKEYGSHTPVRCA 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+S Q + L+ +++V TPGRL +L+ GE + L + FVLDEADRM++
Sbjct: 108 VIFGGVSAVPQIKELQRGIDILVATPGRLNDLIHQGE---ISLSHVEMFVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II +LP+ K+QTL+FSAT+
Sbjct: 165 GFIHDVKKIISLLPV------------------------KKQTLLFSATMP--------- 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I+ L+E+ + N A+V++T + + + +E+S +E+K A
Sbjct: 192 --------------PEIQALTEK--LLHNPAVVEVTPVSSIVDLIEDSLYYVDKENKRAL 235
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L ++L T+VF + ++ L I+ +H Q AR K SQ
Sbjct: 236 LVHLLKREAITSTLVFTRTKHGADRMAKFLTKNRINAAAIHGDKSQGARQKALSQF 291
>gi|50543204|ref|XP_499768.1| YALI0A04939p [Yarrowia lipolytica]
gi|49645633|emb|CAG83693.1| YALI0A04939p [Yarrowia lipolytica CLIB122]
Length = 998
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 160/299 (53%), Gaps = 25/299 (8%)
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
LP++ + E+RE +M E+ + + +A++ PTRELA Q+TDHL V++
Sbjct: 487 LPVLDKEREDRENEVEMDEETEKVERDMSSVKPPQAIVFAPTRELAHQITDHLNAVSQFC 546
Query: 292 NV---RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
+ RV+ + GG+S KQ RL+K P +VV TPGR E ++ + + V+D
Sbjct: 547 PISGPRVMALTGGLSIMKQRRLMKWNPAIVVATPGRFHEFITDTDGMVDVFKRTKTVVMD 606
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRM+++GH+ +L +D++ +G+ + Q CV ++ Q+ ++
Sbjct: 607 EADRMLQDGHYEDLDKALDLI------GRGKVAKRQTCVFSATFQK----------SLMF 650
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
D ++K + G ++++ L +S+ + + VD V+A ++ ES +EC
Sbjct: 651 KLDKKRKQRTGLATDQETIRFL-----VSKMKFRQFHPTFVDANPAEVVARQVLESIVEC 705
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+KD YLYY L + G++I+F SI +++ ++ +L+ L + LH+ M Q+AR++
Sbjct: 706 GAMEKDQYLYYFLLTY-PGKSIIFVNSIDSVKRLTPMLQNLELPAVQLHSNMIQKARMR 763
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 93/194 (47%), Gaps = 42/194 (21%)
Query: 62 GFLSLEEID--EASYNLQIPKPEKG-KPGKKLNSKKRKRSSANEEDSGDGD--------- 109
GF LEE+D + N +P G KP KK + K+ K++ ++ SGD
Sbjct: 255 GFYGLEELDGVDIVVNNGLPTFVVGEKPEKKNSKKETKKAEVKKDKSGDASEPAKKKAKV 314
Query: 110 -GDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEA 168
DG +DG V K + K + KKK +G + A+++ PDD
Sbjct: 315 AKDG-KDGKEVAKTQPK-------QNSKKKAEGNAFE------ALNSVPDD--------- 351
Query: 169 EISTEFDAW--NELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
W N +L+ L++ +Y L +K PT IQK IP G DVIG A TGSGK
Sbjct: 352 ---IHLPDWTLNGEQLNYSLIQGLYALGYKSPTEIQKKSIPPIL-AGDDVIGKASTGSGK 407
Query: 227 TLAFGLPIMQRLLE 240
TLA+GLPI+ R LE
Sbjct: 408 TLAYGLPILHRFLE 421
>gi|397644308|gb|EJK76339.1| hypothetical protein THAOC_01902 [Thalassiosira oceanica]
Length = 476
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 194/444 (43%), Gaps = 103/444 (23%)
Query: 89 KLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVE 148
K +SKKRKR +++++++ D DG G ++QE+ +E +
Sbjct: 3 KKDSKKRKRGASSQDEASDDDGRKVVSAVGAEQQEDDGSSSEQ----------------D 46
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
E +++ P + LH L+ SI L+++ T IQ + IP
Sbjct: 47 EDGIITSKP-------------------FASFGLHETLLSSIASLKWENATKIQASSIPP 87
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A +G+DVIG AETGSGKT AF +P++ LLE+ P+ + A+
Sbjct: 88 AL-EGRDVIGLAETGSGKTGAFSIPVLNYLLEK-------------------PQRSVFAV 127
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
I+ PTRELA Q+ + + + G+ V +VGG+ Q L P VVV TPGRL +
Sbjct: 128 ILAPTRELAFQIHEVVAALGSGMGASSVCVVGGVDMASQAIALARNPHVVVATPGRLLDH 187
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ + L + + VLDEADRM+ RE+ I++++P G
Sbjct: 188 LQNTKG--FHLRQIKYLVLDEADRMLSMDFEREINEILEVIPDHEGG------------- 232
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
R+T++FSAT+ + KL+ SL V +T
Sbjct: 233 --------RRTMLFSATMTSKVE---KLQRASLVDPVRVEVSTKFQT------------- 268
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
KL +S++ + KD YL Y+++ H +VF + ++ ++ +L+
Sbjct: 269 ---------PKKLLQSYLFIPAKYKDCYLTYLINEHAGQSILVFGATCNNVQRLALMLRN 319
Query: 509 LGIDVWTLHAQMQQRARLKLFSQM 532
LG LH QM Q RL ++
Sbjct: 320 LGFPAICLHGQMSQPKRLGALTKF 343
>gi|383851888|ref|XP_003701463.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Megachile rotundata]
Length = 449
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 173/368 (47%), Gaps = 90/368 (24%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L L+ L+ + K PTPIQ+ CIP G+D IG A+TGSGKTLAF LPI+Q
Sbjct: 3 FTTLNLNSWLVDQCNFMGLKNPTPIQQNCIPRIL-AGEDCIGCAKTGSGKTLAFALPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E+ P G + ALI+TPTRELA Q+ D + K I ++
Sbjct: 62 KLSED-------------------PYG-IFALILTPTRELAFQIADQFSAIGKSIGLKKC 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS-----FFVLDEAD 351
IVGGM Q L P +VV TPGRL + HL +T S F VLDEAD
Sbjct: 102 VIVGGMDMVIQGLELSKHPHIVVATPGRLAD-------HLTSCNTFSLKKIKFLVLDEAD 154
Query: 352 RMIENGHF-RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI--AL 408
R++E GHF +L+ I D LP K++Q L+FSAT+ AL
Sbjct: 155 RLLE-GHFDDQLKVIFDALP------------------------KQKQMLLFSATMTDAL 189
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
S K K V+ I +E +G VA V +L++ ++ C
Sbjct: 190 S------------KVKDIVSKKAFIWESTEDSG----VATV---------RQLDQRYVLC 224
Query: 469 KEEDKDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
+ +D++L ++ + + G ++F + + +S +L +G LHA ++Q+
Sbjct: 225 PSDVRDSFLVEVIRTFRTTNENGSIMIFTDTCKNCQVLSMMLSDVGFKNVALHAMIKQKD 284
Query: 525 RLKLFSQM 532
RL SQ
Sbjct: 285 RLAALSQF 292
>gi|297850038|ref|XP_002892900.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
gi|297338742|gb|EFH69159.1| hypothetical protein ARALYDRAFT_471825 [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 77/345 (22%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L ++PTP+Q C+P G+DV+G A+TGSGKT AF LPI+ RL E+
Sbjct: 72 LGMRKPTPVQTHCVPKIL-AGRDVLGLAQTGSGKTAAFALPILHRLAED----------- 119
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P G + AL++TPTRELA Q+ + K + +N+R IVGGM Q R L
Sbjct: 120 --------PYG-VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTRSLV 170
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+RP +V+ TPGR+ L+ F VLDEADR+++ G EL++I LP
Sbjct: 171 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP-- 228
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS--KQSVNGL 430
K RQTL+FSAT ++++ + L+H S K+ ++ GL
Sbjct: 229 ----------------------KSRQTLLFSAT--MTSNLQTLLEHSSNKAYFYEAYEGL 264
Query: 431 NSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH---GQG 487
+++TL+++ FI ++ K+ YL +ILS G
Sbjct: 265 KTVDTLTQQ-------------------------FIFEDKDAKELYLVHILSQMEDKGIR 299
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++F ++ + +S +L L ++ +H+ Q RL S+
Sbjct: 300 SAMIFVSTCRTCQRLSLMLDELEVENVAMHSLNSQSMRLSALSKF 344
>gi|355621610|ref|ZP_09046211.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
gi|354823417|gb|EHF07748.1| hypothetical protein HMPREF1020_00290 [Clostridium sp. 7_3_54FAA]
Length = 477
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 173/356 (48%), Gaps = 67/356 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L PLL+K++ + P+PIQ+ IP G+DV+G A+TG+GKT AF LPI+Q
Sbjct: 3 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVL-AGRDVLGCAQTGTGKTAAFALPIIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L++ EK KY+ K +R+LI+TPTRELALQ+ ++ K +VR
Sbjct: 62 NLMKPSEK-------------KYS-KRVIRSLILTPTRELALQIAENFKEYGSRTSVRCA 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+S Q L+ +++V TPGRL +L+ G V+L + FVLDEADRM++
Sbjct: 108 VIFGGVSANPQIEELRRGIDILVATPGRLNDLVGQG---FVDLAHVEIFVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II +LP+ ++QTL+FSAT+
Sbjct: 165 GFIHDVRKIISLLPV------------------------RKQTLLFSATMP--------- 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I+ L+++ + N A V++T + + ++ S +E+K +
Sbjct: 192 --------------AEIQALTDK--LLHNPARVEVTPVSSTVDIIDASLYYVDKENKRSL 235
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L Y+L+ T+VF + ++ L I +H Q AR S
Sbjct: 236 LVYLLNHEDITSTLVFTRTKHGADRVAKFLVKNRISAAAIHGDKSQGARQTALSHF 291
>gi|308502005|ref|XP_003113187.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
gi|308265488|gb|EFP09441.1| hypothetical protein CRE_25313 [Caenorhabditis remanei]
Length = 506
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 162/346 (46%), Gaps = 72/346 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L + RL + +P+ IQ+A +P A QGKDVIG AETGSGKT AF +P++Q
Sbjct: 56 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHAL-QGKDVIGLAETGSGKTGAFAIPVLQ 114
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL+ P+ L++TPTRELA Q+ + + GI +
Sbjct: 115 SLLDH-------------------PQAFF-CLVLTPTRELAFQIGQQFEALGSGIGLIAA 154
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L RP ++V TPGRL + + + L L F ++DEADR++
Sbjct: 155 VIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGF--NLKALKFLIMDEADRILNM 212
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
EL I+ ++P K+R+T +FSAT+
Sbjct: 213 DFEVELDKILKVIP------------------------KERRTYLFSATMT--------- 239
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ V+ L ERA +R + A V ++ + L++ +I + K+ Y
Sbjct: 240 --------KKVSKL-------ERASLR-DPARVSVSTRYKTVDNLKQHYIFIPNKYKETY 283
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
L Y+L+ H IVFC + A I+ +L+ LG+ LH QM Q
Sbjct: 284 LVYLLNEHAGNSAIVFCATCATAMQIAVMLRQLGMQAVPLHGQMSQ 329
>gi|367033825|ref|XP_003666195.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
gi|347013467|gb|AEO60950.1| hypothetical protein MYCTH_2096529 [Myceliophthora thermophila ATCC
42464]
Length = 493
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 80/411 (19%)
Query: 125 KNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPD-----DAEEELVNEAEIS----TEFD 175
+ + +E G K+ + K K+ E + SN P DAE V+ A +
Sbjct: 6 RKISHENGAVKETSVEAPKAKSKTEPIPKSNEPSHDAGSDAESATVDNASREGNGKSVVK 65
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L + L + RL +K PTPIQ+ IP A Q +D+IG AETGSGKT AF LPI+
Sbjct: 66 TFRDLGIVDSLCDACERLGYKNPTPIQQEAIPLAL-QNRDIIGIAETGSGKTAAFALPIL 124
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LL++ + L AL++ PTRELA Q+ + + I++R
Sbjct: 125 QALLDKPQP--------------------LFALVLAPTRELAAQIAQAFEALGSLISLRC 164
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
I+GG+ +Q L +P VVV TPGRL + + + L L F V+DEADR+++
Sbjct: 165 ALILGGLDMVQQAIALGKKPHVVVATPGRLLDHLEKTKG--FSLRNLKFLVMDEADRLLD 222
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
L+ I+ LP ++R+T +FSAT++
Sbjct: 223 MDFGPILEKILKFLP------------------------RERRTFLFSATMS-------- 250
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ +E+L +RA +R + + ++ + L +++I KD
Sbjct: 251 ---------------SKVESL-QRASLRDPLKVSISSSKYQTVSTLVQNYIFIPHMHKDT 294
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+ + I+F ++ + I+ LL+ LG+ LH + Q ARL
Sbjct: 295 YLIYLCNEFAGQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARL 345
>gi|378727302|gb|EHY53761.1| ATP-dependent rRNA helicase RRP3 [Exophiala dermatitidis
NIH/UT8656]
Length = 480
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 178/375 (47%), Gaps = 75/375 (20%)
Query: 152 AVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
A S+G DD + E E + + EL + L ++ L +K PTPIQ IP A
Sbjct: 33 ARSDGGDD-----IGEIEKANSPTTFKELGIIDSLCEACESLGYKAPTPIQAEAIPLAL- 86
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
QG+D+IG AETGSGKT AF LPI+Q L+++ ++ L +LI+
Sbjct: 87 QGRDLIGLAETGSGKTAAFVLPILQALMDKPQQ--------------------LHSLILA 126
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA Q+++ ++ + I VR +VGGM Q L +P V+V TPGRL + +
Sbjct: 127 PTRELAYQISEAVEALGSLIAVRCAVLVGGMDMITQAIALGKKPHVIVATPGRLLDHLEN 186
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
+ L L + V+DEADR+++ L I+ +LP
Sbjct: 187 TKG--FSLRQLKYLVMDEADRLLDLDFGPILDKILKILP--------------------- 223
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL 451
R+ R+T +FSAT++ + +E+L +RA + + +
Sbjct: 224 --REGRKTYLFSATMS-----------------------SKVESL-QRASLSNPLRVAVS 257
Query: 452 TNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGI 511
+ + L +S++ + KD YL +IL+ H I+F ++ + +S LL+ LG
Sbjct: 258 QDKYQTVSTLIQSYLFIPHKHKDLYLIHILNEHAGHTGIIFTRTVNEAQRVSILLRTLGF 317
Query: 512 DVWTLHAQMQQRARL 526
+H Q+ Q+ARL
Sbjct: 318 SAIPIHGQLSQQARL 332
>gi|312067818|ref|XP_003136922.1| Ddx49-A-prov protein [Loa loa]
Length = 478
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 174/373 (46%), Gaps = 80/373 (21%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
A L + IS E ++EL L L + L PTP+Q CIP G DV+G
Sbjct: 29 ASSSLAKKGNISKE-TTFSELGLSKWLCNQVRHLAMNTPTPVQVNCIPHIL-AGSDVLGC 86
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQ 279
A+TG+GKTLAFGLPI+ L + P G + AL++TPTRELA+Q
Sbjct: 87 AKTGTGKTLAFGLPILHELAID-------------------PYG-ICALVLTPTRELAIQ 126
Query: 280 VTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVEL 339
+ D + I +++ +VGG Q L RP +VV TPGRL + + ++ +L
Sbjct: 127 IGDQFAALGTPIGLKIGIVVGGKDRVAQGNDLARRPHIVVATPGRLADHLESDSENTGKL 186
Query: 340 H-TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L F VLDEADR+++ + EL++I++ LP K+RQ
Sbjct: 187 FKKLRFLVLDEADRLLDGQYSIELKTILNFLP------------------------KQRQ 222
Query: 399 TLVFSATI--ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
TL+FSATI ALS +L S+K ++ +A VD
Sbjct: 223 TLLFSATITSALS-----QLHQVSVKKPYFFED-------------KSEIATVD------ 258
Query: 457 LANKLEESFIECKEEDKDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGID 512
KLE+ ++ C KDAYL Y++ H ++F + + ++ + LG
Sbjct: 259 ---KLEQKYVLCPCAVKDAYLVYVVKNFHEKHPDSLILIFSHTCRECQALAIMFHGLGFQ 315
Query: 513 VWTLHAQMQQRAR 525
V +LH+Q+ Q+ R
Sbjct: 316 VGSLHSQISQQER 328
>gi|312083101|ref|XP_003143720.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
gi|307761116|gb|EFO20350.1| ATP-dependent RNA helicase in chromosome III [Loa loa]
Length = 463
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 169/351 (48%), Gaps = 74/351 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ RL +K+PT +Q A +P A + +D+IG AETGSGKT AF +PI+Q
Sbjct: 26 FQQLGVTDVLCEACDRLNWKKPTKVQIAALPHA-FKKRDIIGLAETGSGKTAAFAIPILQ 84
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE +K L AL++TPTRELA Q+ + + + I + +
Sbjct: 85 ALLETPQK--------------------LFALVLTPTRELAFQIGEQFEALGASIGILIA 124
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ T Q L RP V+V TPGRL + + + L L + V+DEADR++
Sbjct: 125 VIVGGVDTVTQSLALAKRPHVIVATPGRLVDHLENTKGF--NLRALKYLVMDEADRILNM 182
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E++ I+ ++P K+R+T ++SAT+ KL
Sbjct: 183 DFEVEVEKILKVIP------------------------KERRTYLYSATMTKKV---AKL 215
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL + + +T+ +KL++ +I + K+AY
Sbjct: 216 ERASLNDPVRIEVSSKYQTV----------------------DKLKQYYIFIPYKYKEAY 253
Query: 477 LYYILSVHGQGRTIVFC-TSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ IVFC T ++ALR + +L+ LG LH QM Q RL
Sbjct: 254 LVYILNEMAGQTAIVFCSTCVSALR-TALMLRKLGFGAVPLHGQMSQAKRL 303
>gi|354547460|emb|CCE44195.1| hypothetical protein CPAR2_504190 [Candida parapsilosis]
Length = 604
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 180/367 (49%), Gaps = 80/367 (21%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E ST F EL+L ++KSI L F PTPIQ + IP A GKD++ A+TGSGKT
Sbjct: 122 ETSTTF---QELQLSRPILKSIQSLSFTSPTPIQSSTIPIALL-GKDIVAGAQTGSGKTA 177
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
A+ +P+++RL+ + + K A+I+TPTRELA+QV D K +
Sbjct: 178 AYLIPLIERLIFKNATSTK-------------------AIILTPTRELAIQVYDVGKKLG 218
Query: 289 KGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
+ + N+ VGG++ +QE+ LK+RP++V+ TPGRL + + VE + V+
Sbjct: 219 QFVKNLSFGLAVGGLNLRQQEQQLKSRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLVI 276
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADRM+E G EL I+ ++P ++KRQTL+FSAT+
Sbjct: 277 DEADRMLEEGFQEELTEILSLIP-----------------------KQKRQTLLFSATMN 313
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
++ L + + + ++D +A++LE+ F+
Sbjct: 314 -----------------------TKVQDLVQLSLNKPVRVMIDPPK--TVASRLEQQFVR 348
Query: 468 CKEED--KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++ + K A L+ +L GR +VF + + +L +LG+ V LH + Q R
Sbjct: 349 IRKRENLKPALLFQLLR-KLDGRIVVFVSRKEMAHKLRVILGLLGLKVAELHGALTQEQR 407
Query: 526 L---KLF 529
L KLF
Sbjct: 408 LANMKLF 414
>gi|405961989|gb|EKC27711.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
gi|405977898|gb|EKC42325.1| Putative ATP-dependent RNA helicase DDX49 [Crassostrea gigas]
Length = 464
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 172/354 (48%), Gaps = 76/354 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L+ L + + ++PTPIQ CIP +GKD IG A+TGSGKT AF LPI+Q
Sbjct: 18 FEKLGLNEWLWTQCHNMGLRQPTPIQVNCIPPIL-EGKDCIGCAKTGSGKTAAFALPILQ 76
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E+ P G + AL++TPTRELA Q+ + + K INVRV
Sbjct: 77 KLSED-------------------PFG-IFALVLTPTRELAFQIAEQFNVLGKPINVRVT 116
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+ +Q L+ +P +V+ TPGRL + + + L + F VLDEADR+IE+
Sbjct: 117 VITGGLDMMQQGIDLQVKPHIVISTPGRLADHLQSCDTF--SLRKIKFLVLDEADRLIED 174
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+L++I +LP KKRQTL+FSAT+
Sbjct: 175 DFGEQLETIFKVLP------------------------KKRQTLLFSATMT--------- 201
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
KH LK Q V +N + ++ VA V+ L++ ++ + KDAY
Sbjct: 202 KH--LKDLQDV-AMNKPFFWQQ----KSEVATVE---------GLKQYYVLMPADIKDAY 245
Query: 477 LYYILS----VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL ++ + ++F + + + + LG+ LH+ ++Q+ RL
Sbjct: 246 LMQILDKYTEINKKSSIMIFTNTCKYTQILGMVCTQLGLPCVVLHSMIRQKERL 299
>gi|198413641|ref|XP_002129468.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
isoform 1 [Ciona intestinalis]
Length = 449
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 175/372 (47%), Gaps = 87/372 (23%)
Query: 168 AEISTEFD-----------AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
AEIST D + L + +L ++ +L +K+P+ IQ+ IP A QG DV
Sbjct: 2 AEISTSSDDVTKASTEAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVAL-QGNDV 60
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
IG AETGSGKT AF +P++Q LLE ++ L AL++TPTREL
Sbjct: 61 IGLAETGSGKTGAFCIPVLQALLENPQR--------------------LFALVLTPTREL 100
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A Q+ + K + I ++ +VGG+ Q+ +L +P VVV TPGRL + + +
Sbjct: 101 AFQIEEQFKALGSAIGIKTCVVVGGVDMMGQQIILAKKPHVVVATPGRLVDHLEKTKGF- 159
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
L ++ F VLDEADR++ EL +I+ ++P ++
Sbjct: 160 -TLRSIKFLVLDEADRILNMDFESELDTILKVIP------------------------RE 194
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKS--KQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
R+T +FSAT+ KKL+ +L K +VN N T+
Sbjct: 195 RRTFLFSATMTGKV---KKLQRAALTKPVKCAVN--NKYHTV------------------ 231
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+KL + ++ +DKD YL +++ I+FC + A + + +L+ LGI
Sbjct: 232 ----DKLFQYYLFLPSKDKDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLGISAV 287
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 288 PLHGQMSQAKRL 299
>gi|449666070|ref|XP_002163050.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like, partial
[Hydra magnipapillata]
Length = 431
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 159/342 (46%), Gaps = 72/342 (21%)
Query: 185 LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK 244
+L +S RL + PT IQ+ IP A +GKD+IG AETGSGKT AF LP++Q LL+ ++
Sbjct: 5 VLCESCLRLGWTHPTKIQREAIPLAL-EGKDIIGLAETGSGKTGAFALPVLQTLLDNPQR 63
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMST 304
L AL+ITPTRELA Q+++ + + I ++ IVGG+
Sbjct: 64 --------------------LYALVITPTRELAFQISEQFEALGSSIGIKCAVIVGGVDL 103
Query: 305 EKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
Q L +P +V+ TPGRL + + + L +L + ++DEADR++ E+
Sbjct: 104 MTQSLALTKKPHIVIATPGRLVDHLENTKG--FSLRSLKYLIMDEADRILNMDFEEEVNK 161
Query: 365 IIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK 424
I+ ++P K+R T +FSAT+ KL+ SLK+
Sbjct: 162 ILKVIP------------------------KERSTYLFSATMTKKV---AKLQRASLKNP 194
Query: 425 QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH 484
V +T+ KL++S+I + KD YL IL+
Sbjct: 195 VKVEVSTKFQTV----------------------EKLQQSYIFIPNKFKDCYLVSILNDL 232
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
I+FC + ++ + LL+ LG LH QM Q RL
Sbjct: 233 AGNSFIIFCGTCNNVQRVCLLLRHLGFHAVPLHGQMTQAKRL 274
>gi|169768960|ref|XP_001818950.1| ATP-dependent rRNA helicase RRP3 [Aspergillus oryzae RIB40]
gi|91207780|sp|Q2UNB7.1|RRP3_ASPOR RecName: Full=ATP-dependent rRNA helicase rrp3
gi|83766808|dbj|BAE56948.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 472
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 187/399 (46%), Gaps = 76/399 (19%)
Query: 133 KKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFD-----AWNELRLHPLLM 187
KK+K ++ + + +S A S+ +DA + + +E ++ EL L L
Sbjct: 5 KKRKIAREAPQQEDHSDSEAHSSASEDAAPNTTEQEQEPSEAPKQAPKSFKELGLIEQLC 64
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAK 247
++ + +K PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q L+++
Sbjct: 65 EACDSMGYKAPTAIQAEAIPLAL-QGRDLIGLAETGSGKTAAFALPILQALMDK------ 117
Query: 248 MLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQ 307
P L++ PTRELA Q++ +G+ I+VR +VGGM Q
Sbjct: 118 -------------PSSFF-GLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQ 163
Query: 308 ERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 367
L +P ++V TPGRL + + + L L + V+DEADR+++ L I+
Sbjct: 164 SIALGKKPHIIVATPGRLLDHLENTKG--FSLRNLKYLVMDEADRLLDMDFGPILDKILK 221
Query: 368 MLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSV 427
+LP ++R+T +FSAT++
Sbjct: 222 VLP------------------------RERRTYLFSATMS-------------------- 237
Query: 428 NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
+ +E+L +RA ++ + + ++ + L++S+I + KD YL Y+L+
Sbjct: 238 ---SKVESL-QRASLQNPLRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQ 293
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
I+FC ++ + +S L++LG LH Q+ Q ARL
Sbjct: 294 SCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARL 332
>gi|302660698|ref|XP_003022025.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
gi|291185951|gb|EFE41407.1| hypothetical protein TRV_03842 [Trichophyton verrucosum HKI 0517]
Length = 474
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 178/377 (47%), Gaps = 74/377 (19%)
Query: 153 VSNGPDDAEEELVNEAEISTEFDA---WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
VS+G + +E E T+ A + +L + L + L +K PTPIQ IP A
Sbjct: 24 VSSGSERGQETPEESGEGPTDTKAPKTFKDLGIIDSLCDACTSLGYKTPTPIQAESIPLA 83
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
QG+D++G AETGSGKT AF LPI+Q L+E+ P+ + L+
Sbjct: 84 L-QGRDLVGLAETGSGKTAAFALPILQALMEK-------------------PQPYF-GLV 122
Query: 270 ITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
+ PTRELA+Q+T+ + + I+VR IVGGM Q L +P ++V TPGRL + +
Sbjct: 123 LAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHL 182
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV 389
+ L L + V+DEADR+++ L I+ +LP
Sbjct: 183 ENTKGF--SLRNLKYLVMDEADRLLDLDFGPVLDKILKVLP------------------- 221
Query: 390 SSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIV 449
++R+T +FSAT++ + +E+L +RA + + +
Sbjct: 222 -----RERRTYLFSATLS-----------------------SKVESL-QRASLSNPLRVS 252
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
+N + L +S+I + KD YL +IL+ TI+F ++ + +S LL+ L
Sbjct: 253 ISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRAL 312
Query: 510 GIDVWTLHAQMQQRARL 526
G LH Q+ Q ARL
Sbjct: 313 GFGAIPLHGQLSQSARL 329
>gi|168010159|ref|XP_001757772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691048|gb|EDQ77412.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 753
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 167/355 (47%), Gaps = 76/355 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L L+++ L ++EPTPIQ ACIP A G+D+ G+A TGSGKT AF LP+++
Sbjct: 130 FGELNLSRPLIRACETLGYREPTPIQAACIPLAL-TGRDICGSAVTGSGKTGAFALPMLE 188
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINVR 294
RLL Y P+ +R LI+TPTRELA+QV ++ +A+ +V
Sbjct: 189 RLL-------------------YRPRRIPAIRCLILTPTRELAVQVHSMVQKLAQFTDVT 229
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+VGG+S++ QE L+ARP++VV TPGR+ + + V L LS VLDEADR++
Sbjct: 230 SAIVVGGLSSKVQEVALRARPDIVVATPGRMLDHLQNSLS--VGLEDLSILVLDEADRLL 287
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E G +E+ ++ P K+RQT++FSAT+
Sbjct: 288 ELGFTQEVHELVRQCP------------------------KRRQTMLFSATMTEEVSNLI 323
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK---EE 471
L LNS LS + V+ L E ++ + E
Sbjct: 324 NL------------SLNSPVRLSADPSTKRPVS-------------LSEEVVKIRPALEN 358
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
DK+A L + + + + I+F + L + G+ LH + Q RL
Sbjct: 359 DKEAVLLALCTRTFKEKVIIFSGMKVEAHRLKILFGLAGLKAAELHGNLTQAMRL 413
>gi|344230065|gb|EGV61950.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 448
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 171/354 (48%), Gaps = 70/354 (19%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++EL + L +S+ ++ +PT IQ ACIP +GKD IG A+TGSGKT+AFGLP++
Sbjct: 3 TFHELGVADWLCESLNSMKIHKPTSIQAACIPEVL-KGKDCIGGAKTGSGKTIAFGLPML 61
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+ E+ P G + L++TPTRELALQ+ + V +N+RV
Sbjct: 62 HKWSED-------------------PFG-VYGLVLTPTRELALQIAEQFSAVGSSMNIRV 101
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
IVGG +Q ++ +P ++ TPGRL + +++ GE + L + F VLDEADR++
Sbjct: 102 KVIVGGEDMIEQALAIQKKPHFIIATPGRLADHILNSGEDTINGLRRIKFLVLDEADRLL 161
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
N ++L I ++LP KKRQTL+F+AT+ +
Sbjct: 162 SNSFGKDLDRIFNVLP----------------------DSKKRQTLLFTATVTDAV---- 195
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
SLK K ++ IE++ + ++ + L +I K+
Sbjct: 196 ----RSLKDKNDKVFVHEIESVDK----------------FIIPSTLSLYYIFVPSYVKE 235
Query: 475 AYLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
AYL +L+ ++ I+F + +L+ L V +LH++M Q R+
Sbjct: 236 AYLNEVLNLDIYKDKVGIIFVNRTKTAEMLRRMLRKLEFRVTSLHSEMPQTERV 289
>gi|342877843|gb|EGU79271.1| hypothetical protein FOXB_10221 [Fusarium oxysporum Fo5176]
Length = 485
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 75/365 (20%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
EE V +A T + +L + L ++ +L +K PTPIQ+ IP A +G+D+IG AE
Sbjct: 51 EEAVEDAPKKT----FKDLGIVDALCEACEKLNYKYPTPIQEKSIPVAL-EGRDIIGLAE 105
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TGSGKT AF LP++Q LL++ + L L++ PTRELA Q+
Sbjct: 106 TGSGKTAAFALPVLQALLDKPQP--------------------LFGLVLAPTRELATQIG 145
Query: 282 DHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
+ + I++R IVGG+ Q L +P ++V TPGRL + + + L T
Sbjct: 146 QAFEALGSLISLRCAVIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGF--SLRT 203
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
L + ++DEADR+++ + I+ +P ++R+T +
Sbjct: 204 LKYLIMDEADRLLDMDFGPSIDKILKFIP------------------------RERRTYL 239
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSATI+ + IE+L +RA +R V + +N + L
Sbjct: 240 FSATIS-----------------------SKIESL-QRASLRDPVRVSISSNKYQTVSTL 275
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ +I KD YL Y+++ H TI+F ++ + IS LL+ LG LH Q+
Sbjct: 276 LQHYIFIPHVRKDVYLIYLINEHVGKSTIIFTRTVWETQRISILLRTLGFGAIPLHGQLS 335
Query: 522 QRARL 526
Q +RL
Sbjct: 336 QTSRL 340
>gi|304315659|ref|YP_003850804.1| DEAD/DEAH box helicase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777161|gb|ADL67720.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 514
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L+ ++K+I + F+EP+ IQ IP QG DVIG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-QGSDVIGQAETGTGKTLAYGAPIIN 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ + +G + L++TPTRELA+QV D L + K VR++
Sbjct: 62 NI--------------------GSNEGKVFCLVLTPTRELAIQVNDELARIGKYSKVRLL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG+ ++Q + +K ++++GTPGR+ +L+ ++ ++ L+ + + VLDEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIIIGTPGRVLDLI---KRDILRLNDVKYLVLDEADEMLDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II N +N K+RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------KERQTMMFSATMP--------- 185
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I+ L+++ M+++ + + + + ++ + E K +++
Sbjct: 186 --------------DEIKNLAKKY-MKSDAKFISIVKKTMTVSTVQHFYYEVKNQERFES 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V TI+FC + + ++ ++ G +V +H M Q R+
Sbjct: 231 LCRILDVEEPSSTIIFCKTKKEVDELTENMQSRGYNVEGMHGDMSQNQRI 280
>gi|26450667|dbj|BAC42444.1| putative replication protein A1 [Arabidopsis thaliana]
gi|28951031|gb|AAO63439.1| At5g60990 [Arabidopsis thaliana]
Length = 456
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 60/350 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L+K+ RL +K P+ IQ +P A +GKDVIG A+TGSGKT AF +PI+Q
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFAL-EGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE + D E + P A +++PTRELA+Q+ + + + I++R
Sbjct: 70 ALLE-------YVYD-SEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+ +Q L RP V+V TPGRLW+ MS + L +L + VLDEADR++
Sbjct: 122 VLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMS--DTKGFSLKSLKYLVLDEADRLLNE 179
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ L I++ +P+ +R+T +FSAT+ +KL
Sbjct: 180 DFEKSLNQILEEIPL------------------------ERETFLFSATMTKKV---RKL 212
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ L++ + + T+ + L++ + + KD Y
Sbjct: 213 QRACLRNPVKIEAASKYSTV----------------------DTLKQQYRFVAAKYKDCY 250
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YILS + +++F + R ++ +L+ LG + QM Q RL
Sbjct: 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
>gi|257885750|ref|ZP_05665403.1| helicase [Enterococcus faecium 1,231,501]
gi|257821606|gb|EEV48736.1| helicase [Enterococcus faecium 1,231,501]
Length = 503
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ V A+ +++ ++ KE
Sbjct: 195 FMKNPHHVKIKAKE------------------------------VTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|395333626|gb|EJF66003.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 461
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++++ ++++K PT IQ +P A QG+D+IG A TGSGKT AF LPI+Q+L E+
Sbjct: 34 LLEALEQMKYKAPTDIQAEALPHAL-QGRDIIGVASTGSGKTAAFALPILQKLWED---- 88
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A +I PTRELA Q+T + + + VR I+GG+ +
Sbjct: 89 ---------------PKG-LFACVIAPTRELAFQITQQFESIGSAMGVRCATIIGGVDIQ 132
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q+ L +P V+V TPGRL E + E L +L F VLDEADR+++ L I
Sbjct: 133 SQKIALAKKPHVIVATPGRLLEHLE--ETKGFSLRSLKFLVLDEADRLLDMDFGPILDKI 190
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P K+R T +FSAT+ KL+ SL
Sbjct: 191 LKLIP------------------------KERTTYLFSATMTTKV---AKLQRASL---- 219
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
+N V++ + + L + ++ KD +L Y+ +
Sbjct: 220 ------------------SNPVRVEVNSKYSTVSTLLQYYLLMPLPQKDVHLIYLANTLA 261
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
Q I+F ++ + +S +L+ LG LH Q+ Q ARL
Sbjct: 262 QNSMIIFTRTVHDAQRLSIMLRSLGFPAIPLHGQLSQSARL 302
>gi|294932199|ref|XP_002780153.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239890075|gb|EER11948.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 702
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 195/391 (49%), Gaps = 82/391 (20%)
Query: 193 LQFKEPTPIQKACIPAAAHQ-GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
L F PT IQ+ IP A GKD++ AAETGSGKTLA+G+P++ +L E ++ + +D
Sbjct: 149 LGFTIPTQIQRQSIPPALLPIGKDILAAAETGSGKTLAYGIPLLTNIL-YMESSSSLKDD 207
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERL 310
+ + + + L A+++ PTRELA+QV HL V I ++ + PIVGGMS +KQ RL
Sbjct: 208 NDDNSNR---RRRLDAIVVVPTRELAMQVYTHLIKVGHYIPHLLIAPIVGGMSIQKQHRL 264
Query: 311 LKARPEVVVGTPGRLWELMSGG-----------------------EKHLVELHTLSFFVL 347
+ P ++V TPGRL L+ +K + +L T+ VL
Sbjct: 265 MHKVPNIIVATPGRLAALLGCATIKVSGDVLDRADTEIQASDELRKKLIPQLRTI---VL 321
Query: 348 DEADRMI-ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
DEADR++ + GHF++L ++D++ T NK Q LVFSAT+
Sbjct: 322 DEADRLVADEGHFKDLTRVLDIIYTTTQVNKIQH-------------------LVFSATL 362
Query: 407 A-----LSADFRKKLKHGSLKSKQSVNGLNSIETLSE-RAGMRANVAIVDLT-----NMC 455
A ++ K+ K KS+ + G LS+ R + ++DLT N
Sbjct: 363 ATESSHITGIVSKREKKRIEKSRNQIAGDKITRLLSKLRLRTEKHREVIDLTKGDSVNAK 422
Query: 456 VLANKLEE--SFIECK-EEDKD---AYLYYILSVHG----------QGRTIVFCTSIAAL 499
++ L + +F E + DKD A LYY+ G G+ I+F SI+ +
Sbjct: 423 DTSSSLPDTLTFKEIRVSVDKDREAALLYYLHYRFGPKSDKCKEDSYGKIIMFVNSISYV 482
Query: 500 RHISSLLKILG---IDVWTLHAQMQQRARLK 527
+SS+L + ++V LH+ ++Q+ RLK
Sbjct: 483 YRLSSILSLATSDKVNVCGLHSDLKQKDRLK 513
>gi|294657345|ref|XP_459659.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
gi|91207781|sp|Q6BQ61.2|RRP3_DEBHA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|199432622|emb|CAG87892.2| DEHA2E08052p [Debaryomyces hansenii CBS767]
Length = 477
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 185/406 (45%), Gaps = 86/406 (21%)
Query: 135 KKKKKKGKKI--KTVEESVAVSNGPDDAEEELVNEAEISTEFD------------AWNEL 180
KK K KK+ + + E + + A+EE E ++ FD ++NEL
Sbjct: 11 KKSKTHSKKLDARALAEKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFKSFNEL 70
Query: 181 RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE 240
+L P L+++I +++F +PTPIQ IP A +GKD+IG A+TGSGKT AF +PI+Q L E
Sbjct: 71 KLIPELLEAIQQMKFTKPTPIQSEAIPHAL-EGKDIIGLAQTGSGKTAAFAIPILQALWE 129
Query: 241 EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG 300
+A Y L++ PTRELA Q+ + + + +R V IVG
Sbjct: 130 A-------------QAAYYG-------LVLAPTRELAYQIKETFDALGSSMGLRSVCIVG 169
Query: 301 GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR 360
GM Q R L +P ++V TPGR+ + + + L L + V+DEADR+++
Sbjct: 170 GMDMMDQARDLMRKPHILVATPGRIMDHLEHTKG--FSLKNLKYLVMDEADRLLDMDFGP 227
Query: 361 ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
L I+ ++P +R T +FSAT+
Sbjct: 228 ALDKILKIIP------------------------TQRTTYLFSATMT------------- 250
Query: 421 LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI 480
N I L +RA + N V ++N A+ L +S + + K+ YL ++
Sbjct: 251 ----------NKIAKL-QRASLH-NPVRVAVSNKYQTADNLVQSMMLVSDGYKNTYLIHL 298
Query: 481 LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L+ I+F + A + + L +ILG LH Q+ Q RL
Sbjct: 299 LNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRL 344
>gi|302835956|ref|XP_002949539.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
gi|300265366|gb|EFJ49558.1| hypothetical protein VOLCADRAFT_42311 [Volvox carteri f.
nagariensis]
Length = 423
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 182/396 (45%), Gaps = 78/396 (19%)
Query: 145 KTVEESVAVSNGPDDAEEE----LVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTP 200
+ +E SV ++ PD E + + ++++ + L L L L PT
Sbjct: 4 QPLEGSVEIAAVPDGVAAERSGGVASTSDVAAVPADFKSLGLSEWLCGVCKSLGMNTPTE 63
Query: 201 IQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYA 260
+Q+ CIPA QG+DVIG A+TGSGKT AF LPI+Q L ++
Sbjct: 64 VQRGCIPAIL-QGRDVIGLAQTGSGKTAAFALPILQVLAKD------------------- 103
Query: 261 PKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
P G + AL++TPTRELA Q+ + + + G+ ++ + I+GG+ + Q R L RP VVV
Sbjct: 104 PYG-VFALVLTPTRELAAQICEQFRALGAGMRLKELVIIGGVDMQHQARELARRPHVVVA 162
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGRL L+ L F VLDEADR+++ +L+ +
Sbjct: 163 TPGRLRGLLDADGGLSAGLSRTRFLVLDEADRVLDPTFEDDLRYV--------------- 207
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA 440
+ C+ R+ RQTL+FSAT+ S L+ SL+ + T
Sbjct: 208 ---RFCL------RQDRQTLLFSATMTRSL---IALQKASLQDAHVFQAYEGLRT----- 250
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR----TIVFCTSI 496
A++L E ++ + K+ YL+Y+L+V R I+FC++
Sbjct: 251 -----------------ADRLREEYLFLPAKVKEVYLHYLLTVVVPARKVRSAIIFCSTC 293
Query: 497 AALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+S LL+ LG+ LH+ Q+ARL ++
Sbjct: 294 RGCHLLSVLLEELGLPAAALHSGKSQKARLSALARF 329
>gi|212638043|ref|YP_002314563.1| ATP-dependent RNA helicase [Anoxybacillus flavithermus WK1]
gi|212559523|gb|ACJ32578.1| ATP-dependent RNA helicase [Anoxybacillus flavithermus WK1]
Length = 471
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 168/353 (47%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NE L P LMK++ ++ F+E TPIQ A IP + Q +DVIG A+TG+GKT AFG+P+++
Sbjct: 7 FNEFGLSPELMKAVSKMGFEEATPIQAATIPLSL-QNRDVIGQAQTGTGKTAAFGIPLIE 65
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ D +A ++A+++ PTRELA+QV++ L + VRV+
Sbjct: 66 KI------------DMNNDA--------VQAIVVAPTRELAIQVSEELYKIGSTKRVRVL 105
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG E+Q R LK P ++VGTPGR+ + + L +HT+ VLDEAD M+
Sbjct: 106 PIYGGQDIERQIRALKKHPHIIVGTPGRILDHIQRRTLRLQHVHTV---VLDEADEMLNM 162
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+
Sbjct: 163 GFVEDIEAILSHVP------------------------TERQTLLFSATMP--------- 189
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I ++ER + V M V +E+ +IE +E+ K
Sbjct: 190 --------------EPIRRIAERFMNNPELVRVKAKEMTV--PNIEQYYIEIQEKKKFDT 233
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
L +L + IVF + + ++ L + G +H + Q RL +
Sbjct: 234 LTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVL 286
>gi|18424420|ref|NP_568931.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
gi|108861883|sp|Q8GY84.2|RH10_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 10
gi|10177322|dbj|BAB10648.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010025|gb|AED97408.1| DEAD-box ATP-dependent RNA helicase 10 [Arabidopsis thaliana]
Length = 456
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 167/350 (47%), Gaps = 60/350 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L+K+ RL +K P+ IQ +P A +GKDVIG A+TGSGKT AF +PI+Q
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFAL-EGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE + E + P A +++PTRELA+Q+ + + + I++R
Sbjct: 70 ALLEYVYDS--------EPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+ +Q L RP V+V TPGRLW+ MS + L +L + VLDEADR++
Sbjct: 122 VLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMS--DTKGFSLKSLKYLVLDEADRLLNE 179
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ L I++ +P+ +R+T +FSAT+ +KL
Sbjct: 180 DFEKSLNQILEEIPL------------------------ERKTFLFSATMTKKV---RKL 212
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ L++ + + T+ + L++ + + KD Y
Sbjct: 213 QRACLRNPVKIEAASKYSTV----------------------DTLKQQYRFVAAKYKDCY 250
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YILS + +++F + R ++ +L+ LG + QM Q RL
Sbjct: 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
>gi|67618387|ref|XP_667590.1| DEAD/DEAH box RNA helicase [Cryptosporidium hominis TU502]
gi|54658742|gb|EAL37362.1| DEAD/DEAH box RNA helicase [Cryptosporidium hominis]
Length = 543
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 180/360 (50%), Gaps = 44/360 (12%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L L+K++ L F E T IQK IP A G+D++ AETGSGKT AF LP ++
Sbjct: 2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALS-GRDIMAEAETGSGKTAAFLLPALE 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL + G K L++ P+RELA+Q L+ + K V
Sbjct: 61 RLLRSPYVRNSRVSSLGRVGGAVGTK----VLVLLPSRELAMQCFGVLESLTKYCPVITR 116
Query: 297 PIV-GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+V GGM+ ++QER+LK +P +V+ TPGR+ +++ ++L L +LDEADR+++
Sbjct: 117 AVVTGGMNIQQQERILKCQPHIVIATPGRILDMLLNTLS--IQLELLEIIILDEADRLLD 174
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G FR Q C+ + + RQT++FSAT++ S
Sbjct: 175 MG-FR-----------------------QECLEILKYSSRTRQTMLFSATLSRSVTDLAL 210
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRA--NVAIVDLTNMCVLANKLEESFIEC-KEED 472
L ++N + T+ ++G+++ + +L ++ L++ LE+ F+E KEE+
Sbjct: 211 L---------ALNNPCKVSTVGLKSGIKSAGSSGESELLSITGLSSTLEQEFLEITKEEE 261
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ L+YIL+ R IVF + + L I G+ LH + Q RL+ FS+
Sbjct: 262 REGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGLSSTELHGFLPQEKRLENFSKF 321
>gi|326476440|gb|EGE00450.1| ATP-dependent rRNA helicase RRP3 [Trichophyton tonsurans CBS
112818]
gi|326482119|gb|EGE06129.1| ATP-dependent rRNA helicase RRP3 [Trichophyton equinum CBS 127.97]
Length = 474
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 176/370 (47%), Gaps = 75/370 (20%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
P++++EE + T + +L + L + L +K PTPIQ IP A QG+D+
Sbjct: 35 PEESDEEPADTKAPKT----FKDLGIIDSLCDACTSLGYKNPTPIQAESIPLAL-QGRDL 89
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
+G AETGSGKT AF LPI+Q L+E+ P+ + L++ PTREL
Sbjct: 90 VGLAETGSGKTAAFALPILQALMEK-------------------PQPYF-GLVLAPTREL 129
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A+Q+T+ + + I+VR IVGGM Q L +P ++V TPGRL + + +
Sbjct: 130 AVQITEAFEALGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRLLDHLENTKGF- 188
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
L L + V+DEADR+++ L I+ +LP ++
Sbjct: 189 -SLRNLKYLVMDEADRLLDLDFGPVLDKILKVLP------------------------RE 223
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
R+T +FSAT++ + +E+L +RA + + + +N
Sbjct: 224 RRTYLFSATLS-----------------------SKVESL-QRASLSNPLRVSISSNKYQ 259
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
+ L +S+I + KD YL +IL+ TI+F ++ + +S LL+ LG L
Sbjct: 260 TVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSILLRALGFGAIPL 319
Query: 517 HAQMQQRARL 526
H Q+ Q ARL
Sbjct: 320 HGQLSQSARL 329
>gi|297797047|ref|XP_002866408.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
gi|297312243|gb|EFH42667.1| hypothetical protein ARALYDRAFT_919338 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 60/350 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L+K+ RL +K P+ IQ +P A +GKDVIG A+TGSGKT AF +PI+Q
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFAL-EGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE + D E + P A +++PTRELA+Q+ + + + I++R
Sbjct: 70 ALLE-------YVYD-SEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+ +Q L RP V+V TPGRLW+ MS + L +L + VLDEADR++
Sbjct: 122 VLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMS--DTKGFSLKSLKYLVLDEADRLLNE 179
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ L I++ +P ++R+T +FSAT+ +KL
Sbjct: 180 DFEKSLNQILEEIP------------------------RERKTFLFSATMTKKV---RKL 212
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ L++ + + T+ + L++ + + KD Y
Sbjct: 213 QRACLRNPVKIEAASKYSTV----------------------DTLKQQYRFVAAKYKDCY 250
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YILS + +++F + R ++ +L+ LG + QM Q RL
Sbjct: 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
>gi|142982528|sp|A2QAX7.1|DRS1_ASPNC RecName: Full=ATP-dependent RNA helicase drs1
gi|134055839|emb|CAK37361.1| unnamed protein product [Aspergillus niger]
Length = 824
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 168/374 (44%), Gaps = 72/374 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE +E+ ++ ++ E L +++ + + F PTPIQ+ IP A GKD++G+A
Sbjct: 295 EEEKTSESAMADAKRSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALL-GKDIVGSA 353
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKT AF +PI++RLL K R I+ PTRELA+Q
Sbjct: 354 VTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQC 396
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 397 YNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD-- 454
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 455 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 490
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ + D ++ GLN L A + N A+
Sbjct: 491 LFSATMTDTVDKLIRV------------GLNRPVRLMVDA--KKNTAVT----------- 525
Query: 461 LEESFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
L + F+ +E+ + YL Y+ GR IVF + + +LG+ LH
Sbjct: 526 LVQEFVRLRPGREDKRLGYLLYLCKEIYTGRVIVFFRQKKEAHRVRIIFGLLGLKAAELH 585
Query: 518 AQMQQRARLKLFSQ 531
M Q ++ F +
Sbjct: 586 GSMSQEQSVENFRE 599
>gi|32399059|emb|CAD98299.1| DEAD/DEAH box RNA helicase, possible [Cryptosporidium parvum]
Length = 543
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 180/360 (50%), Gaps = 44/360 (12%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L L+K++ L F E T IQK IP A G+D++ AETGSGKT AF LP ++
Sbjct: 2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALS-GRDIMAEAETGSGKTAAFLLPALE 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL + G K L++ P+RELA+Q L+ + K V
Sbjct: 61 RLLRSPYVRNSRVSSLGRVGGAVGTK----VLVLLPSRELAMQCFGVLESLTKYCPVITR 116
Query: 297 PIV-GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+V GGM+ ++QER+LK +P +V+ TPGR+ +++ ++L L +LDEADR+++
Sbjct: 117 AVVTGGMNIQQQERILKCQPHIVIATPGRILDMLLNTLS--IQLELLEIIILDEADRLLD 174
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G FR Q C+ + + RQT++FSAT++ S
Sbjct: 175 MG-FR-----------------------QECLEILKYSSRTRQTMLFSATLSRSVTDLAL 210
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRA--NVAIVDLTNMCVLANKLEESFIEC-KEED 472
L ++N + T+ ++G+++ + +L ++ L++ LE+ F+E KEE+
Sbjct: 211 L---------ALNNPCKVSTVGLKSGIKSVGSSGESELLSITGLSSTLEQEFLEITKEEE 261
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ L+YIL+ R IVF + + L I G+ LH + Q RL+ FS+
Sbjct: 262 REGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGLSSTELHGFLPQEKRLENFSKF 321
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 162/361 (44%), Gaps = 72/361 (19%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+ST ++ + L +++ + + F PTPIQ+ IP A GKD++G+A TGSGKT A
Sbjct: 305 VSTFNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL-LGKDIVGSAVTGSGKTAA 363
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +PI++RLL K R I+ PTRELA+Q + +A
Sbjct: 364 FVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQCYNVATKLAT 406
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
++ +VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDE
Sbjct: 407 HTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDE 464
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
ADRM+E+G EL I+ +P K RQT++FSAT+ S
Sbjct: 465 ADRMLEDGFADELNEILTTIP------------------------KSRQTMLFSATMTDS 500
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC- 468
D ++ GLN R +VD + L + F+
Sbjct: 501 VDKLIRV------------GLN-----------RPVRLMVDSKKNTSM--NLTQEFVRLR 535
Query: 469 --KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+E+ + YL Y+ + GR IVF + + +LG+ LH M Q R+
Sbjct: 536 PGREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQEQRI 595
Query: 527 K 527
K
Sbjct: 596 K 596
>gi|448535294|ref|XP_003870949.1| Rrp3 protein [Candida orthopsilosis Co 90-125]
gi|380355305|emb|CCG24822.1| Rrp3 protein [Candida orthopsilosis]
Length = 481
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 182/399 (45%), Gaps = 78/399 (19%)
Query: 134 KKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTE------FDAWNELRLHPLLM 187
KK+ K K+++ +ES ++G DA + + E + + F+ + EL L P L+
Sbjct: 24 KKQALLKQKQLQESKESSHETDGDKDANSSVASTTETTIDPDAELKFNTFAELNLVPDLL 83
Query: 188 KSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAK 247
++I ++ F +PTPIQ IP A +GKD+IG A TGSGKT AF +PI+Q L
Sbjct: 84 EAIQQMNFAKPTPIQSEAIPHAL-EGKDIIGLAVTGSGKTAAFAIPILQAL--------- 133
Query: 248 MLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQ 307
+ + L++ PTRELA Q+ D + + +R V IVGGM Q
Sbjct: 134 -----------WHAQTPYFGLVLAPTRELAFQIKDTFDALGATMGLRSVCIVGGMDMMDQ 182
Query: 308 ERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIID 367
R L +P ++V TPGR+ + + + L L + V+DEADR+++ L I+
Sbjct: 183 ARDLMRKPHIIVATPGRIMDHLEHTKG--FSLKNLKYLVMDEADRLLDMDFGPALDKILK 240
Query: 368 MLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSV 427
++P KR T +FSAT+
Sbjct: 241 VIP------------------------PKRTTYLFSATMT-------------------- 256
Query: 428 NGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQG 487
N IE L +RA + N V ++ A+ L +S + + K+ L ++L+
Sbjct: 257 ---NKIEKL-QRASLH-NPVRVAVSTKYQTADNLVQSMMLVNDGYKNTILIHLLNEFMGK 311
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
IVF ++A + + L +ILG + LH Q+ Q RL
Sbjct: 312 SIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQAQRL 350
>gi|373859820|ref|ZP_09602543.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
gi|372450463|gb|EHP23951.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
Length = 487
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L P +MKSI ++ F+E TPIQ IP + + KD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FQDLGLSPAMMKSIKKMGFEEATPIQAETIPLSL-ENKDLIGQAQTGTGKTAAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ DK + +++ +++ PTRELA+QV++ L + G VRV+
Sbjct: 63 KV------------DKDAD--------YIQGIVVAPTRELAIQVSEELYKIGYGKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK P ++VGTPGRL + ++ L +HT +LDEAD M+
Sbjct: 103 PIYGGQDINRQIRALKKNPHIIVGTPGRLIDHINRKNLRLDRVHTA---ILDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+ +
Sbjct: 160 GFIEDIEAILSQIP------------------------AERQTLLFSATMPM-------- 187
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I+ ++E+ V V M V + +E+ ++E +E +K
Sbjct: 188 ---------------PIQRMAEKFMKEPQVVRVKTKEMTV--SSVEQFYVEVQERNKFDV 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
L +L + IVF + + ++ L + G +H + Q RL +
Sbjct: 231 LTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYMAEGIHGDLSQAKRLSVL 283
>gi|332232745|ref|XP_003265564.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Nomascus
leucogenys]
Length = 455
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPMVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P V++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|390933807|ref|YP_006391312.1| DEAD/DEAH box helicase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569308|gb|AFK85713.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 513
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 176/350 (50%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L+ ++K+I + F+EP+ IQ IP +G DVIG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-EGLDVIGQAETGTGKTLAYGAPIIN 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ G + LI+TPTRELA+QV D L + K VR++
Sbjct: 62 NF--------------------SSNDGKVFCLILTPTRELAIQVNDELARIGKYSKVRLL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVRYLVIDEADEMLDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II N +N ++RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------RERQTMMFSATMP--------- 185
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I+ L+++ M++N + + + + ++ + E K +++
Sbjct: 186 --------------DEIKNLAKKY-MKSNAKFISIVKKTMTVSTVQHFYYEVKNQERFES 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V TI+FC + + ++ ++ G +V +H M Q R+
Sbjct: 231 LCRILDVDEPSSTIIFCKTKKEVDELTENMQSRGYNVEGMHGDMSQNQRI 280
>gi|313228985|emb|CBY18137.1| unnamed protein product [Oikopleura dioica]
Length = 451
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 176/375 (46%), Gaps = 71/375 (18%)
Query: 153 VSNGPDDAEEELVNEAEISTE-FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
+S+ D E++ E E + E +AW L + + ++ L++ +PTPIQ+ IP A
Sbjct: 1 MSSSESDHEQDDNQEEEFTLEGLEAWQSLGVCDEVAQTCVDLKWSKPTPIQQKSIPIAI- 59
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
+GKDVIG AETGSGKT AF +P++Q LL K G L L++T
Sbjct: 60 EGKDVIGLAETGSGKTAAFAIPVLQTLL------------------KTPGGGRLSCLVMT 101
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA Q+ + + + I + IVGG+ Q+ L +P V+V TPGRL + +
Sbjct: 102 PTRELAFQIREQFQALGSSIGLSCACIVGGIEMMSQQLALAKKPHVIVATPGRLVDHLE- 160
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
+ L L F ++DEADR++ E+ I+ +P
Sbjct: 161 -KTRGFNLKALKFLIMDEADRILNLDFEAEVDKILRAIP--------------------- 198
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL 451
++RQT++FSAT+ KKL+ +LK+ ++ + +T+
Sbjct: 199 ---RERQTMLFSATMTAKV---KKLQRAALKNPVKISINSKYKTV--------------- 237
Query: 452 TNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGI 511
+K + ++ E K+ YL +L+ ++F ++ A I+ L+K LG
Sbjct: 238 -------DKNIQKYMFIPEAHKECYLVSLLNELQGSSFMIFTSTCAKTSLIARLVKRLGY 290
Query: 512 DVWTLHAQMQQRARL 526
D LH QM Q+ RL
Sbjct: 291 DSVPLHGQMSQQKRL 305
>gi|328704199|ref|XP_001943651.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Acyrthosiphon pisum]
Length = 771
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 168/363 (46%), Gaps = 77/363 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ ++ + LMK+I L + PTPIQ A IP A G+D+ G A TG+GKT A+ LPI+
Sbjct: 166 SFYQMNISRPLMKAISALNYVHPTPIQAAAIPVAL-LGRDICGCAATGTGKTAAYMLPIL 224
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHL---RALIITPTRELALQVTDHLKGVAKGIN 292
+RLL Y PKG R L++ PTREL +QV K +A+ +
Sbjct: 225 ERLL-------------------YRPKGFTPITRVLVLVPTRELGVQVYQVTKQLAQFTS 265
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
V V VGG+ + QE +L+ P+VV+ TPGRL + + L L VLDEADR
Sbjct: 266 VEVGLSVGGLELKVQESILRKNPDVVIATPGRLLDHLQNTPS--FSLADLEVLVLDEADR 323
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M++ +++ II+M T RQT++FSAT+
Sbjct: 324 MLDENFADQMKEIINMCART------------------------RQTMLFSATM------ 353
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI---ECK 469
+ +N + T+S + V I +N V N L + F+ + K
Sbjct: 354 --------------TDAVNDLATVS----LSKPVKIFVDSNTDVAFN-LRQEFVRLRQGK 394
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
E+D+DA L ++ + T++F + A + LL + G+ LH + Q RL+
Sbjct: 395 EQDRDATLAALVCRTFRDHTMIFVRTKADAHRVKILLGLFGLKAGELHGNLSQPQRLEAL 454
Query: 530 SQM 532
Q
Sbjct: 455 RQF 457
>gi|354548378|emb|CCE45114.1| hypothetical protein CPAR2_701180 [Candida parapsilosis]
Length = 478
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 188/415 (45%), Gaps = 78/415 (18%)
Query: 118 GVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTE---- 173
G+ K+ + + + +K KK+ K K ++ES S+G A + E + +
Sbjct: 5 GIHKKSKSSDATKKLAEKIKKQALLKQKQLQESKESSDGDKTASSSVAATTETTIDPDAE 64
Query: 174 --FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
F+ + EL L P L+++I +++F +PTPIQ IP A +GKD+IG A TGSGKT AF
Sbjct: 65 LKFNTFAELNLVPDLLEAIQQMKFTKPTPIQSEAIPHAL-EGKDIIGLAVTGSGKTAAFA 123
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
+PI+Q L + + L++ PTRELA Q+ D + +
Sbjct: 124 IPILQAL--------------------WHAQTPYFGLVLAPTRELAFQIKDTFDALGTTM 163
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+R V IVGGM Q R L +P +VV TPGR+ + + + L L + V+DEAD
Sbjct: 164 GLRSVCIVGGMDMMDQARDLMRKPHIVVATPGRIMDHLEHTKG--FSLKNLKYLVMDEAD 221
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
R+++ L I+ ++P KR T +FSAT+
Sbjct: 222 RLLDMDFGPALDKILKVIP------------------------PKRTTYLFSATMT---- 253
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
N IE L +RA + N V ++ A+ L +S + +
Sbjct: 254 -------------------NKIEKL-QRASLH-NPVRVAVSTKYQTADNLVQSMMLVNDG 292
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ L ++L+ IVF ++A + + L +ILG + LH Q+ Q RL
Sbjct: 293 YKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQAQRL 347
>gi|323509459|dbj|BAJ77622.1| cgd6_4830 [Cryptosporidium parvum]
Length = 532
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 180/360 (50%), Gaps = 44/360 (12%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L L+K++ L F E T IQK IP A G+D++ AETGSGKT AF LP ++
Sbjct: 2 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLAL-SGRDIMAEAETGSGKTAAFLLPALE 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL + G K L++ P+RELA+Q L+ + K V
Sbjct: 61 RLLRSPYVRNSRVSSLGRVGGAVGTK----VLVLLPSRELAMQCFGVLESLTKYCPVITR 116
Query: 297 PIV-GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+V GGM+ ++QER+LK +P +V+ TPGR+ +++ ++L L +LDEADR+++
Sbjct: 117 AVVTGGMNIQQQERILKCQPHIVIATPGRILDMLLNTLS--IQLELLEIIILDEADRLLD 174
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G FR Q C+ + + RQT++FSAT++ S
Sbjct: 175 MG-FR-----------------------QECLEILKYSSRTRQTMLFSATLSRSVTDLAL 210
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRA--NVAIVDLTNMCVLANKLEESFIEC-KEED 472
L ++N + T+ ++G+++ + +L ++ L++ LE+ F+E KEE+
Sbjct: 211 L---------ALNNPCKVSTVGLKSGIKSVGSSGESELLSITGLSSTLEQEFLEITKEEE 261
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ L+YIL+ R IVF + + L I G+ LH + Q RL+ FS+
Sbjct: 262 REGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGLSSTELHGFLPQEKRLENFSKF 321
>gi|447911698|ref|YP_007393110.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
gi|445187407|gb|AGE29049.1| Cold-shock DEAD-box protein A [Enterococcus faecium NRRL B-2354]
Length = 503
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R++ L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRQE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKNPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|224083077|ref|XP_002306942.1| predicted protein [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 178/386 (46%), Gaps = 80/386 (20%)
Query: 153 VSNGPDDAEEELVNEAEISTEF----------DAWNELRLHPLLMKSIYRLQFKEPTPIQ 202
V G DD +E N E + F +++ EL L L+++ L + +PTPIQ
Sbjct: 104 VYKGEDDEGDEDTNVEERKSFFAPSEGTSFHANSFMELNLSRPLLRACEALGYTKPTPIQ 163
Query: 203 KACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK 262
ACIP A G+D+ G+A TGSGKT AF LP ++RLL + PK
Sbjct: 164 AACIPLAL-TGRDICGSAITGSGKTAAFALPTLERLL-------------------FRPK 203
Query: 263 GHL--RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVG 320
L R LI+TPTRELA+QV ++ +A+ ++R +VGG+ST+ QE L++ P++VV
Sbjct: 204 RILAIRVLILTPTRELAVQVHSMIEKIAQFTDIRCCLVVGGLSTKVQEASLRSMPDIVVA 263
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS 380
TPGR+ + + V+L L+ +LDEADR++E G E+ ++ + P
Sbjct: 264 TPGRMIDHLRNSMS--VDLDDLAVLILDEADRLLELGFNAEIHELVRLCP---------- 311
Query: 381 EQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERA 440
K+RQT++FSAT+ D KL L LS
Sbjct: 312 --------------KRRQTMLFSATMTEEVDMLIKL------------SLTKPLRLSADP 345
Query: 441 GMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALR 500
+ A LT + ++ +E +++A L + S + I+F + A
Sbjct: 346 SAKRPAA---LTEEVLRLRRM-------REVNQEAVLLALCSKTFTSKAIIFSGTKQAAH 395
Query: 501 HISSLLKILGIDVWTLHAQMQQRARL 526
+ L + G LH + Q RL
Sbjct: 396 RLKILFGLAGFKAAELHGNLTQAQRL 421
>gi|11121196|emb|CAC14786.1| DEAD box protein [Homo sapiens]
Length = 455
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|66475988|ref|XP_627810.1| Drs1p, eIF4a-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|46229323|gb|EAK90172.1| Drs1p, eIF4a-1-family RNA SFII helicase [Cryptosporidium parvum
Iowa II]
Length = 573
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 180/360 (50%), Gaps = 44/360 (12%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+ L L L+K++ L F E T IQK IP A G+D++ AETGSGKT AF LP ++
Sbjct: 32 WSSLELSRPLLKALSDLNFVEATLIQKEVIPLALS-GRDIMAEAETGSGKTAAFLLPALE 90
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL + G K L++ P+RELA+Q L+ + K V
Sbjct: 91 RLLRSPYVRNSRVSSLGRVGGAVGTK----VLVLLPSRELAMQCFGVLESLTKYCPVITR 146
Query: 297 PIV-GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+V GGM+ ++QER+LK +P +V+ TPGR+ +++ ++L L +LDEADR+++
Sbjct: 147 AVVTGGMNIQQQERILKCQPHIVIATPGRILDMLLNTLS--IQLELLEIIILDEADRLLD 204
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G FR Q C+ + + RQT++FSAT++ S
Sbjct: 205 MG-FR-----------------------QECLEILKYSSRTRQTMLFSATLSRSVTDLAL 240
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRA--NVAIVDLTNMCVLANKLEESFIEC-KEED 472
L ++N + T+ ++G+++ + +L ++ L++ LE+ F+E KEE+
Sbjct: 241 L---------ALNNPCKVSTVGLKSGIKSVGSSGESELLSITGLSSTLEQEFLEITKEEE 291
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ L+YIL+ R IVF + + L I G+ LH + Q RL+ FS+
Sbjct: 292 REGALFYILNKIFTKRVIVFFQTKKEAHRCAILGNIFGLSSTELHGFLPQEKRLENFSKF 351
>gi|440638773|gb|ELR08692.1| ATP-dependent rRNA helicase rrp3 [Geomyces destructans 20631-21]
Length = 485
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 71/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L +K PTPIQ+ IP A G+D+IG AETGSGKT AF LPI+Q LL++ +
Sbjct: 77 LGYKSPTPIQQESIPPAL-AGRDLIGLAETGSGKTAAFALPILQALLDKPQP-------- 127
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L L++ PTRELA Q++ +G+ I+VR IVGGM Q L
Sbjct: 128 ------------LFGLVLAPTRELAYQISKSFEGLGILISVRCAVIVGGMDMVTQSIALG 175
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L L + V+DEADR+++ L I+ +LP
Sbjct: 176 KKPHIIVATPGRLLDHLENTKGF--SLRALKYLVMDEADRLLDLDFGPILDKILKVLP-- 231
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSAT++ +
Sbjct: 232 ----------------------RERRTYLFSATMS-----------------------SK 246
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA +R + + TN + L +S++ KD YL Y+L+ IVF
Sbjct: 247 VESL-QRASLRDPLRVQISTNKYQTVSTLLQSYLFIPHPHKDTYLIYLLNDFAGQSAIVF 305
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 306 TRTVNETQRLAILLRTLGFGAIPLHGQLSQSARL 339
>gi|426371741|ref|XP_004052800.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Gorilla gorilla gorilla]
Length = 455
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|402591826|gb|EJW85755.1| Ddx49 protein [Wuchereria bancrofti]
Length = 461
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 165/357 (46%), Gaps = 79/357 (22%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ EL L L + L PTP+Q CIP G DV+G A+TG+GKTLAFGLPI+
Sbjct: 45 TFAELGLSKWLCDQLRHLAINTPTPVQVNCIPHIL-AGSDVLGCAKTGTGKTLAFGLPIL 103
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
L + P G + ALI+TPTRELA+Q+ D + I +++
Sbjct: 104 HELALD-------------------PYG-ICALILTPTRELAMQIGDQFAALGTSIGLKI 143
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
IVGG Q L RP ++V TPGRL + L S E L F VLDEADR++
Sbjct: 144 GIIVGGKDRVAQSSDLARRPHIIVATPGRLADHLESDSENTGKLFEKLRFLVLDEADRLL 203
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI--ALSADF 412
+ + EL++I+ LP K+RQTL+FSATI ALS
Sbjct: 204 DGQYSVELKTILTFLP------------------------KQRQTLLFSATITSALS--- 236
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+L S+K ++ +A VD KLE+ ++ C
Sbjct: 237 --QLHQVSVKKPYFFED-------------KSEIATVD---------KLEQKYVLCPCAV 272
Query: 473 KDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
KDAYL Y++ H + ++F + + ++ + LG V +LH+Q+ Q+ R
Sbjct: 273 KDAYLVYVVKNFHEKHPESLILIFSHTCRECQALAIMFHGLGFKVGSLHSQISQQER 329
>gi|302508139|ref|XP_003016030.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
gi|291179599|gb|EFE35385.1| hypothetical protein ARB_05427 [Arthroderma benhamiae CBS 112371]
Length = 474
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 161/334 (48%), Gaps = 71/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L +K PTPIQ IP A QG+D++G AETGSGKT AF LPI+Q L+E+
Sbjct: 67 LGYKTPTPIQAESIPLAL-QGRDLVGLAETGSGKTAAFALPILQALMEK----------- 114
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P+ + L++ PTRELA+Q+T+ + + I+VR IVGGM Q L
Sbjct: 115 --------PQPYF-GLVLAPTRELAVQITEAFEALGSLISVRCAVIVGGMDMISQSISLG 165
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L L + V+DEADR+++ L I+ +LP
Sbjct: 166 KKPHIIVATPGRLLDHLENTKGF--SLRNLKYLVMDEADRLLDLDFGPVLDKILKVLP-- 221
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSAT++ +
Sbjct: 222 ----------------------RERRTYLFSATLS-----------------------SK 236
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA + + + +N + L +S+I + KD YL +IL+ TI+F
Sbjct: 237 VESL-QRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIF 295
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + +S LL+ LG LH Q+ Q ARL
Sbjct: 296 TRTVNETQRLSILLRALGFGAIPLHGQLSQSARL 329
>gi|290968757|ref|ZP_06560294.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049114|ref|ZP_08542124.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
gi|290781053|gb|EFD93644.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333764226|gb|EGL41626.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
199-6]
Length = 520
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 171/359 (47%), Gaps = 71/359 (19%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ + L++ ++++++ + F+EPTPIQ IP A QG D+IG A+TG+GKT AFG+P
Sbjct: 2 LEKFQNLKISEVILQALNAMGFEEPTPIQAESIPVAL-QGADMIGQAQTGTGKTAAFGIP 60
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+++++L K P ++ ++++PTRELA+QV + L +A+ +
Sbjct: 61 VLEKIL------------------KNEPTQSIQTVVLSPTRELAMQVAEELNHLAQCTTI 102
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ +PI GG E+Q R L+ P+++V TPGRL + M G L ++HT+ VLDEAD M
Sbjct: 103 QALPIYGGQDMERQLRRLRKHPQIIVATPGRLMDHMKRGTIDLSDIHTI---VLDEADEM 159
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++ +I+ P T RQTL+FSAT+
Sbjct: 160 LDMGFIDDINTIMSATPDT------------------------RQTLLFSATMPKPI--- 192
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++L L Q + M+A +DL +E+S+IE + K
Sbjct: 193 QQLAETFLHEPQIIR-------------MKAKEVTMDL---------IEQSYIETPDRQK 230
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + I+F + + ++ LK G +H + Q R + Q
Sbjct: 231 FDVLCRLLDLQEPDLAIIFVRTKRRVDEVAEALKKRGYSSEGIHGDLTQAKRDSVIRQF 289
>gi|257870943|ref|ZP_05650596.1| helicase [Enterococcus gallinarum EG2]
gi|357051322|ref|ZP_09112516.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
gi|257805107|gb|EEV33929.1| helicase [Enterococcus gallinarum EG2]
gi|355380144|gb|EHG27289.1| hypothetical protein HMPREF9478_02499 [Enterococcus saccharolyticus
30_1]
Length = 502
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 170/359 (47%), Gaps = 85/359 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L L+ S+ R F+E TPIQ+A IP A QG+DVIG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-QGRDVIGQAQTGTGKTAAFGLPML- 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
EK P H L+ L+I PTRELA+Q + L + K +RV
Sbjct: 61 --------------------EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI-----ALSA 410
G +++ II +P ++RQTL+FSAT+ ++
Sbjct: 158 MGFLEDIEKIISQVP------------------------EERQTLLFSATMPPAIKSIGV 193
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
F K +H +K+K+ + A+ +++ ++ K+
Sbjct: 194 KFMKNPEHVQIKAKE------------------------------MTADLIDQYYVRSKD 223
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + +L V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 224 YEKFDIMTRLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVL 282
>gi|291000284|ref|XP_002682709.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
gi|284096337|gb|EFC49965.1| dead box-containing ATP-dependent RNA helicase [Naegleria gruberi]
Length = 955
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 173/365 (47%), Gaps = 65/365 (17%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + L + + +LQ PT IQ+ CIP GK+VIG ++TGSGKT AF LPI+
Sbjct: 137 SFTDLGISSWLEEHLSKLQINMPTVIQEKCIPPTL-AGKNVIGMSQTGSGKTAAFALPII 195
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L ++ Y + ALIITP RELA+Q+ H + +A + +RV
Sbjct: 196 QNLAKDM----------------YG----IYALIITPARELAIQIKQHFEILAGDLPIRV 235
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+VGGM KQ LL + P +VVGTPGR+ + + + + V DEADR+
Sbjct: 236 ALLVGGMDYLKQAHLLDSSPHIVVGTPGRIEDAIRTFNNDGY-FKKIKYLVFDEADRIFS 294
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+ +L I+ S+ KRQTL++SAT+ KK
Sbjct: 295 MDYSLDLDRIL------------------------SVSNPKRQTLLYSATMNNQV---KK 327
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L ++ NS +T ER ++ I D + LA+ L + ++ E KDA
Sbjct: 328 LAKMAMS--------NSGKTKEER---EQSLYIYDACKLFQLADNLSQYYLFMPEHVKDA 376
Query: 476 YLYYIL-SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMIT 534
Y ++ S+ +IVF + I ++ ++LGI +LHA Q+ R + +
Sbjct: 377 YFVQLINSLPDNSISIVFFSDITQCELMNQTCRLLGISCDSLHASKSQKERFAV----LK 432
Query: 535 WIRKR 539
+ RKR
Sbjct: 433 YFRKR 437
>gi|431839233|gb|ELK01160.1| ATP-dependent RNA helicase DDX24 [Pteropus alecto]
Length = 822
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 132/275 (48%), Gaps = 53/275 (19%)
Query: 258 KYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
K PK L L++TPTRELA+QV H+ VA+
Sbjct: 375 KTHPKRPLLGLVLTPTRELAVQVRQHVDAVARFTX------------------------- 409
Query: 318 VVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNK 377
RLWEL+ HL L L V+DEADRM+E GHF EL +++ML
Sbjct: 410 ------RLWELVKEKHPHLSNLRQLRCLVVDEADRMVEKGHFAELSQLLEML-------- 455
Query: 378 GQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLS 437
S+ N KRQT VFSAT+ L ++ H K + ++ ++ L
Sbjct: 456 --SDSQYN---------PKRQTFVFSATLTLVHQAPARILHK--KHTKKIDKTAKLDLLM 502
Query: 438 ERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIA 497
++ GMR ++DLT L E+ I C+ ++KD YLYY L + GRT+VF SI+
Sbjct: 503 QKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDLYLYYFL-MQYPGRTLVFANSIS 561
Query: 498 ALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +S LLK+L I TLHA M Q+ RL+ Q
Sbjct: 562 CIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQF 596
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+ AW +L + +++++ L F PTPIQ + A D++GAAETGSGKTLAF +
Sbjct: 187 DVSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAI 246
Query: 233 PIMQRLLE-EREKAAKMLEDKGEEAEKYAPKGHLRA 267
P++ +L+ + +K L + G AP G RA
Sbjct: 247 PMIHLVLQCQVKKPTPALSNIG------APPGETRA 276
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 171/364 (46%), Gaps = 77/364 (21%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E+ + + EL L L K++ +L + +PTPIQ IP + GKD++ +A TGSGKT
Sbjct: 228 EVVMDLPTFEELHLSRPLQKAVAKLGYTQPTPIQAKAIPLILN-GKDILASATTGSGKTA 286
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKG 286
AF LPI++RLL Y H R LI+ PTRELALQ +
Sbjct: 287 AFILPILERLL-------------------YRDATHRVSRVLIVLPTRELALQCHSVFES 327
Query: 287 VAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
+A+ NV+ +VGG+S + QE L+ RP+V++ TPGRL + + H V L + V
Sbjct: 328 LAQFTNVQSCLVVGGLSNKVQEHELRKRPDVIIATPGRLIDHLLNA--HDVGLEDIEILV 385
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
LDEADR+++ G EL +++ P +G RQTL+FSAT+
Sbjct: 386 LDEADRLLDMGFKDELNRVVESCP--DG----------------------RQTLLFSATL 421
Query: 407 ALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
+ KL +LS+ VA+ L +A+ LE+ FI
Sbjct: 422 SDDVKLLAKL------------------SLSQ----PVRVAVDALFQ---VASTLEQEFI 456
Query: 467 ECKE---EDKDAYLYYILS-VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
+ K D+ A L + + V G IVF S + I+ LL + G+ V LH + Q
Sbjct: 457 KIKPGQLADRTAMLLSLCTRVFNGGGCIVFFRSKKEVHRIAILLGLSGLKVGELHGDLNQ 516
Query: 523 RARL 526
R
Sbjct: 517 EQRF 520
>gi|320164743|gb|EFW41642.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 594
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 163/358 (45%), Gaps = 79/358 (22%)
Query: 169 EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
E T F A L + P L+++ R+ FK PTPIQ+ IP A G+D+IG AETGSGKT
Sbjct: 143 EAPTTFQA---LGIVPSLVEACSRMGFKAPTPIQRQSIPVAL-TGRDIIGLAETGSGKTA 198
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
+F LP++Q+LLE+ + L ALI+TPTRELA Q+++ + +
Sbjct: 199 SFALPVLQKLLEKPQP--------------------LFALILTPTRELAYQISEQFEALG 238
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
I V+ IVGGM Q L +P +++ TPGR+ + + + + L F ++D
Sbjct: 239 STIGVKCCVIVGGMDMTTQAIALSKKPHILIATPGRIVDHLENTKGY------LKFLIMD 292
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++ E+ I+ +P K+R T ++SAT+
Sbjct: 293 EADRILNMDFEEEVDKILKAIP------------------------KERNTYLYSATMTS 328
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
KL+ SL++ + +T+ L + ++
Sbjct: 329 KV---AKLQRASLRNPVKIEVATKYQTV----------------------GTLVQQYLFI 363
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
KD YL Y L+ TI+F + A + ++ +L+ LG LH Q+ Q RL
Sbjct: 364 PARFKDCYLTYALNQLAGNSTIIFTMTCANAQRVALMLRNLGFPAIPLHGQLTQPKRL 421
>gi|297691246|ref|XP_002823001.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pongo abelii]
Length = 455
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|451996880|gb|EMD89346.1| hypothetical protein COCHEDRAFT_1141477 [Cochliobolus
heterostrophus C5]
Length = 518
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 188/415 (45%), Gaps = 96/415 (23%)
Query: 123 EEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRL 182
E++N+ N +G + +E+ A + G D+A + + +L +
Sbjct: 63 EDQNVANSSGSE-------------QEAEAATAGADEARK-------------TFADLGV 96
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
L + L+F PTPIQ IP A QG+DVIG AETGSGKT AF LPI+Q LLE++
Sbjct: 97 REELCDACENLKFTNPTPIQAQAIPLAL-QGRDVIGLAETGSGKTAAFVLPILQALLEKQ 155
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGM 302
+ L LI+ PTRELA Q+ + + INV+ +VGGM
Sbjct: 156 QS--------------------LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGM 195
Query: 303 STEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 362
Q L +P ++V TPGRL + + + L L + VLDEADR+++ L
Sbjct: 196 DMVPQAIALSKKPHIIVATPGRLLDHLENTKG--FSLKHLKYMVLDEADRLLDLDFGPVL 253
Query: 363 QSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 422
I+ +LP R+ R T +FSAT++
Sbjct: 254 DKILKVLP-----------------------REGRHTYLFSATMS--------------- 275
Query: 423 SKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILS 482
+ +E+L +RA ++ V + ++ + + L + +I + KD YL ++L+
Sbjct: 276 --------SKVESL-QRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKYKDLYLIHLLN 326
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIR 537
+ TI+F ++ + I+ LL+ LG LH Q+ Q ARL ++ T R
Sbjct: 327 DNIGHPTIIFSRTVNETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFKTQSR 381
>gi|20149629|ref|NP_057439.2| probable ATP-dependent RNA helicase DDX47 isoform 1 [Homo sapiens]
gi|52782792|sp|Q9H0S4.1|DDX47_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|12052856|emb|CAB66601.1| hypothetical protein [Homo sapiens]
gi|45786091|gb|AAH68009.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Homo sapiens]
gi|117645464|emb|CAL38198.1| hypothetical protein [synthetic construct]
gi|119616683|gb|EAW96277.1| hCG2044052 [Homo sapiens]
gi|119616687|gb|EAW96281.1| hCG27698, isoform CRA_a [Homo sapiens]
gi|193785403|dbj|BAG54556.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|355564029|gb|EHH20529.1| Putative ATP-dependent RNA helicase DDX47 [Macaca mulatta]
gi|355785916|gb|EHH66099.1| Putative ATP-dependent RNA helicase DDX47 [Macaca fascicularis]
gi|380786753|gb|AFE65252.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
gi|383418889|gb|AFH32658.1| putative ATP-dependent RNA helicase DDX47 isoform 1 [Macaca
mulatta]
Length = 455
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 174/373 (46%), Gaps = 76/373 (20%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
S+ P +A + ++ E E T + +L + +L ++ +L + +PT IQ IP A QG
Sbjct: 7 SDSPTEASQPVMEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QG 61
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
+D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPT
Sbjct: 62 RDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPT 101
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 102 RELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTK 161
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L L + V+DEADR++ E+ I+ ++P
Sbjct: 162 GF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP----------------------- 196
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 -RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV----------------- 235
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 -----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTA 290
Query: 514 WTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 291 IPLHGQMSQSKRL 303
>gi|45184660|ref|NP_982378.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|74695973|sp|Q75F95.1|DRS1_ASHGO RecName: Full=ATP-dependent RNA helicase DRS1
gi|44980006|gb|AAS50202.1| AAL164Cp [Ashbya gossypii ATCC 10895]
gi|374105576|gb|AEY94487.1| FAAL164Cp [Ashbya gossypii FDAG1]
Length = 734
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 175/357 (49%), Gaps = 75/357 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+N L L ++K + L + +P+PIQ A IP A GKDVI A TGSGKT AF +PI++
Sbjct: 221 FNSLSLSRPVLKGLAALGYTKPSPIQGATIPIALL-GKDVIAGAVTGSGKTAAFMIPIIE 279
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL + K A R L++TPTRELA+QV D K + K ++
Sbjct: 280 RLLYKPAKIAST-----------------RVLVLTPTRELAIQVADVGKKLGKFVSGLTF 322
Query: 297 PI-VGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ VGG++ +QE+ LK RP++V+ TPGR+ + + V+ ++ V+DEADRM+E
Sbjct: 323 GLAVGGLNLRQQEQALKLRPDIVIATPGRIIDHIRNSASFSVD--SVEVLVIDEADRMLE 380
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+G EL I+ ++P KRQTL+FSAT+
Sbjct: 381 DGFQDELNEIMSLIP------------------------SKRQTLLFSATM--------- 407
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED--K 473
+ + KQ + +LS + +R ++D ANKL + F+ ++ + K
Sbjct: 408 ----NSRIKQLI-------SLSLKKPVR---IMIDPPKQA--ANKLTQEFVRLRKREHLK 451
Query: 474 DAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
A LY++ L GQ R +VF + +L +LG+ LH + Q RL+
Sbjct: 452 PALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLGMKAGELHGSLTQEQRLQ 508
>gi|239624536|ref|ZP_04667567.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47_FAA]
gi|239520922|gb|EEQ60788.1| DEAD/DEAH box helicase domain-containing protein [Clostridiales
bacterium 1_7_47FAA]
Length = 518
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 173/356 (48%), Gaps = 67/356 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL+L PLL+K++ + + +P+PIQ+ IP + G+D++G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELQLSPLLLKALDQKGYIKPSPIQEQAIPYVLN-GQDLLGCAQTGTGKTAAFALPIIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E + K K +RALI+TPTRELALQ+ ++++ G +
Sbjct: 62 NLMERPKNRQK--------------KKPVRALILTPTRELALQIHENIEEYGAGTPINSA 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+S + Q + L+ +++V TPGRL +L+ +H ++L + FVLDEADRM++
Sbjct: 108 VIFGGVSAKPQIQSLRRGIDILVATPGRLLDLIG---QHEIDLSFVEIFVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ +I +LP KKRQTL+FSAT+
Sbjct: 165 GFIHDVKRVITLLP------------------------KKRQTLLFSATMP--------- 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I+ L+ A + N V++T + + +E S + +K
Sbjct: 192 --------------DEIQALA--AKLLHNPVKVEVTPVSSTVDLIETSLYYVDKANKWPL 235
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L ++L T+VF + + L GI +H Q AR S
Sbjct: 236 LVHLLEHEDVSSTLVFTRTKHGADRGAKYLNKSGITAAAIHGDKSQGARQTALSNF 291
>gi|242005222|ref|XP_002423470.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212506558|gb|EEB10732.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 422
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 171/366 (46%), Gaps = 76/366 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L+ +++ +PTPIQ CIP +G D IG A+TGSGKTLAF LPI+Q
Sbjct: 5 FEDLNLNKWIVRQCDSFGLTKPTPIQAHCIPKIL-EGNDCIGCAKTGSGKTLAFALPILQ 63
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L EE P G + AL++TPTRELA Q+ + K IN+++
Sbjct: 64 KLSEE-------------------PFG-IFALVLTPTRELAFQIGEQFLAYGKVINLKLC 103
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GGM Q + L RP +VV TPGRL + + L + F VLDEADR++
Sbjct: 104 VISGGMDMVTQGQELSKRPHIVVSTPGRLADHLDSCNTF--SLKKIRFLVLDEADRLLSG 161
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
++ +I LP+ K+Q L+FSATI
Sbjct: 162 QFDDQISTIFKSLPL------------------------KKQILLFSATI---------- 187
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK + + N + +++VA VD L++ ++ C + KDAY
Sbjct: 188 -NDTLKQAEELLSKNVFSFID-----KSDVATVD---------NLQQFYVLCPDHVKDAY 232
Query: 477 LYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L ++ ++ + G I+F + + +S L +G + +H+ M+Q+ RL S+
Sbjct: 233 LVEVIQLYRKNNENGNIIIFTDTCRNCQLLSMTLNEVGFENVAIHSMMKQKERLAALSRF 292
Query: 533 ITWIRK 538
+ I K
Sbjct: 293 KSNIVK 298
>gi|441477761|dbj|BAM75193.1| vasa-like gene-2, partial [Pinctada fucata]
Length = 451
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 72/361 (19%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
N+ E S E ++ L + +L ++ RL++K P+ IQ+ IP A QG D+IG AETGSG
Sbjct: 13 NDLEDSEESVSFKSLGVVDVLCEACERLKWKSPSKIQREAIPVAL-QGSDIIGLAETGSG 71
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KT AF +PI+Q+LL+ ++ L ALI+TPTRELA Q+++ +
Sbjct: 72 KTGAFAIPILQKLLDSPQR--------------------LYALILTPTRELAFQISEQFE 111
Query: 286 GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
+ I V+ +VGG+ Q +L +P +++ TPGRL + + + L L F
Sbjct: 112 ALGSAIGVKCAVVVGGIDMMSQSLMLAKKPHIIIATPGRLIDHLENTKGF--NLRALKFL 169
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
V+DEADR++ +E+ I+ ++P ++R T ++SAT
Sbjct: 170 VMDEADRILNMDFEQEVDKILKVIP------------------------RERSTYLYSAT 205
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
+ KL+ SL++ V + +T+ +KL++ +
Sbjct: 206 MTKKV---AKLQRASLQNPVKVEVSSKYQTV----------------------DKLQQYY 240
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+ + KD YL +L+ +VF ++ A + + +L+ LG+ LH QM Q R
Sbjct: 241 LFVPAKFKDVYLVSVLNELAGNSFMVFTSTCANTQRTALMLRNLGLTAIPLHGQMSQSKR 300
Query: 526 L 526
L
Sbjct: 301 L 301
>gi|39644716|gb|AAH09379.2| DDX47 protein, partial [Homo sapiens]
Length = 450
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 3 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 57
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 58 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 97
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 98 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 157
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 158 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 191
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 192 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 230
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 231 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 286
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 287 PLHGQMSQSKRL 298
>gi|347751920|ref|YP_004859485.1| DEAD/DEAH box helicase domain-containing protein [Bacillus
coagulans 36D1]
gi|347584438|gb|AEP00705.1| DEAD/DEAH box helicase domain protein [Bacillus coagulans 36D1]
Length = 475
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L P ++K++ R+ F+E +PIQ A IP QGKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNLSPAILKAVKRMGFEEASPIQAATIPLTM-QGKDIIGQAQTGTGKTAAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + R + +++ +II PTRELA+QV++ L + + V V+
Sbjct: 63 KI-DHRSR-------------------NIQGIIIAPTRELAIQVSEELYRIGQDSRVHVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK P+++VGTPGR+ + + G L +HTL VLDEAD M+
Sbjct: 103 AVYGGQDISRQIRALKNHPQIIVGTPGRILDHIHRGTLKLDHVHTL---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P K RQT++FSAT+
Sbjct: 160 GFIDDIEAILSTVP------------------------KDRQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V + +E+ +++ +E +K
Sbjct: 187 --------------DPIRKIAERFMNNPELVRVKAKEMTVPS--IEQYYVKVQEREKFDV 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L V IVF + + +++ L + G +H + Q RL + +
Sbjct: 231 LSRLLDVQSPDLAIVFGRTKRRVDELANALNLRGYLAEGIHGDLSQAKRLSVLRKF 286
>gi|73662111|ref|YP_300892.1| ATP-dependent RNA helicase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123643052|sp|Q49Z29.1|Y802_STAS1 RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SSP0802
gi|72494626|dbj|BAE17947.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 506
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 176/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + + +++ + F E TPIQK IP A +GKDV+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKMAETLQSMGFNEATPIQKESIPLAL-EGKDVLGQAQTGTGKTGAFGIPLI- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK A + +++LI+ PTRELA+QV + LK AKG N++VV
Sbjct: 62 --------------------EKVADQEGVQSLILAPTRELAMQVAESLKAFAKGQNIQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMKFIMDKIP---------AEQ--------------RQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+TL ++ M++ V IV N + ++EE + KE +K
Sbjct: 187 --------------KAIQTLVQQF-MKSPV-IVKTMNNEMSDPQIEEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTSFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|258645792|ref|ZP_05733261.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dialister invisus
DSM 15470]
gi|260403163|gb|EEW96710.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Dialister invisus
DSM 15470]
Length = 510
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 172/359 (47%), Gaps = 73/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+D + EL L P +MK+I + F+EPTPIQK IPAA +GKD+IG A+TG+GKT AFG+P
Sbjct: 2 YDTFKELGLVPEIMKAIEDMGFEEPTPIQKVSIPAAM-EGKDLIGQAQTGTGKTAAFGIP 60
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I++++ D E+ + A++++PTRELA+Q + + +A+ + +
Sbjct: 61 ILEKI------------DTTEKGPQ--------AIVLSPTRELAIQSAEEMNRLAQYLPI 100
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+PI GG E+Q R L+ +P ++V TPGRL + M G ++L + VLDE D M
Sbjct: 101 HALPIYGGQDIERQFRALRKKPNIIVATPGRLMDHMKRG---TIDLSHVQILVLDEGDEM 157
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++++I+ +P ++RQT+ FSAT+
Sbjct: 158 VDMGFIDDIRTILAGMP------------------------EERQTMFFSATMPAPI--- 190
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++L L+ V ++A +DL +E+ +IE + K
Sbjct: 191 RELAESFLRDPVLVK-------------IKAATVTIDL---------VEQEYIELPDMQK 228
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + ++ LK G LH + Q+ R + Q
Sbjct: 229 FDCLCRLLDMENPELAIVFVRTKRRADEVTEALKKRGYMAEGLHGDLSQQKRDAVVRQF 287
>gi|432107717|gb|ELK32877.1| Putative ATP-dependent RNA helicase DDX47 [Myotis davidii]
Length = 455
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 170/370 (45%), Gaps = 76/370 (20%)
Query: 157 PDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
P +A + V E E T + +L + +L ++ +L + +PT IQ IP A QG+D+
Sbjct: 10 PTEAPQPAVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQVEAIPLAL-QGRDI 64
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
IG AETGSGKT AF LPI+ LLE ++ L AL++TPTREL
Sbjct: 65 IGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTREL 104
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A Q+++ + + I V+ IVGG+ + Q L +P VV+ TPGRL + + +
Sbjct: 105 AFQISEQFEALGSSIGVQTAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGF- 163
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
L L + V+DEADR++ E+ I+ ++P +
Sbjct: 164 -NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RD 198
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
R+T +FSAT+ +KL+ +LK + +T+
Sbjct: 199 RKTFLFSATMTKKV---QKLQRAALKDPVKCAVSSKYQTV-------------------- 235
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTL 516
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG L
Sbjct: 236 --EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPL 293
Query: 517 HAQMQQRARL 526
H QM Q RL
Sbjct: 294 HGQMSQSKRL 303
>gi|168046775|ref|XP_001775848.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672855|gb|EDQ59387.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 168/384 (43%), Gaps = 73/384 (19%)
Query: 152 AVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAH 211
A SN A L +A+ + E + L L L+++ L K PT +Q+ C+P
Sbjct: 21 AASNKKTAAPALLDEDAKAAKEITTFEGLGLTDWLVRACKELGMKRPTLVQQGCVPQIL- 79
Query: 212 QGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIIT 271
GKDV G A+TGSGKT AF LPI+Q+L E P G + AL++T
Sbjct: 80 AGKDVFGLAQTGSGKTAAFALPILQKLAEN-------------------PYG-VFALVLT 119
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA Q++D K + +N+R +VGGM Q + L RP +V+ TPGRL +
Sbjct: 120 PTRELAFQISDQFKALGSEVNLRSTVVVGGMDMTTQAKALMQRPHIVIATPGRLRDHFMN 179
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
+ VLDEADR+++ G EL+S+ + +P SN
Sbjct: 180 DPGIPDVFAKAKYLVLDEADRLMDVGFESELRSVFETMP----SN--------------- 220
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL 451
RQTL+FSAT+ + L Q G ++E
Sbjct: 221 -----RQTLLFSATMTSNLKALHDLSLDKAFFYQQYEGFKTVEA---------------- 259
Query: 452 TNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR---TIVFCTSIAALRHISSLLKI 508
L++ +I KD YL +I+S + + I+F +S +S ++
Sbjct: 260 ---------LQQQYILTPANVKDVYLMHIMSTLEERKIRSVIIFASSCRTCHLLSLMMSE 310
Query: 509 LGIDVWTLHAQMQQRARLKLFSQM 532
L +D LH+ Q+ RL S+
Sbjct: 311 LEVDTTALHSMKTQQQRLASLSRF 334
>gi|298711460|emb|CBJ32599.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 848
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 159/341 (46%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L ++ +L + T IQ+ +P A +GKDVIG AETGSGKT AF LPI+Q LLE ++
Sbjct: 417 LCEAAAQLGWTHATEIQRQALPLA-FEGKDVIGLAETGSGKTGAFALPILQALLENPQR- 474
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
L A+I+ PTRELA Q+ + ++ + GI ++ V IVGG+
Sbjct: 475 -------------------LFAVIMAPTRELAFQINEVMEALGVGIGLKTVCIVGGIDMF 515
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
+Q L +P VV+ TPGRL + + + L T + VLDEADRM+ E+ +
Sbjct: 516 QQSVALALKPHVVIATPGRLVDHLENTKGF--SLRTAKYLVLDEADRMLGMDFEEEINKV 573
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +LP ++R+T +FSAT+ KL+ SLK
Sbjct: 574 LSVLP------------------------RERRTFLFSATMTSKV---AKLQRASLK--- 603
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
N A V++ N L + ++ + KD YL Y+L+
Sbjct: 604 -------------------NPARVEVANKFSTPKTLVQQYLFIPAKHKDCYLAYVLNEFA 644
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
TIVF ++ + ++ LL+ LG LH QM Q RL
Sbjct: 645 GQSTIVFVSTCNNAQRVALLLRNLGFQAVCLHGQMGQPKRL 685
>gi|429463016|ref|YP_007184479.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811795|ref|YP_007448250.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338530|gb|AFZ82953.1| DEAD/DEAH box helicase family protein [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776953|gb|AGF47952.1| ATP-dependent RNA helicase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 467
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 172/359 (47%), Gaps = 72/359 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L L+ ++ +I F+ PTP+Q+A IP A + +D++ +A+TGSGKT AF LPI+
Sbjct: 2 SFENLGLNANILNAIKATGFESPTPVQQATIPKAILK-QDLVVSAQTGSGKTAAFMLPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN-VR 294
Q L +EK A ++ L++TPTRELA+Q+T ++ +R
Sbjct: 61 QHL-----------------SEKKAQNTSIQVLVLTPTRELAMQITKAASVYGSNLHWLR 103
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V IVGGM + Q + L R +++V TPGRL + M G L +HTL VLDEADRM+
Sbjct: 104 VATIVGGMPYKAQIKALSKRIDILVATPGRLIDQMQSGRVDLKNVHTL---VLDEADRML 160
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ G ++Q+I+ LP K++QT++FSATI
Sbjct: 161 DMGFIDDIQTIVAELP------------------------KEKQTMLFSATID------- 189
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE-EDK 473
NSI L+++ M N + L N N +E+ I + + K
Sbjct: 190 ----------------NSIMNLAKQ--MMNNPERISLNNNKQSHNNIEQKLIYVDDYKHK 231
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L ++L + IVF ++ +S+ L G V LH M QR R + SQ+
Sbjct: 232 IKILQHLLGNENLDQAIVFTSTKRGADDLSNHLSDNGFAVAALHGDMNQRQRTRTLSQL 290
>gi|344266640|ref|XP_003405388.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Loxodonta
africana]
Length = 461
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 172/373 (46%), Gaps = 76/373 (20%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
+N P A + V E E T + +L + +L ++ +L + +PT IQ IP A QG
Sbjct: 13 TNSPTGAPQPQVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QG 67
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
+D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPT
Sbjct: 68 RDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPT 107
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + +
Sbjct: 108 RELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTK 167
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L L + V+DEADR++ E+ I+ ++P
Sbjct: 168 GF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP----------------------- 202
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 203 -RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV----------------- 241
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
KL++ ++ + KD YL YIL+ +VFC++ + + LL+ LG
Sbjct: 242 -----EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMVFCSTCNNTQRTALLLRNLGFTA 296
Query: 514 WTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 297 IPLHGQMSQTKRL 309
>gi|259047319|ref|ZP_05737720.1| cold-shock DEAD box protein A [Granulicatella adiacens ATCC 49175]
gi|259036015|gb|EEW37270.1| cold-shock DEAD box protein A [Granulicatella adiacens ATCC 49175]
Length = 520
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NEL L L++SI ++ F+E TPIQ IP A QG DVIG A+TG+GKT AFGLP++Q
Sbjct: 14 FNELGLDSALLESIEKMGFEEATPIQAQTIPKAL-QGLDVIGQAQTGTGKTAAFGLPMLQ 72
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ K ++ L+I PTRELA+Q + L + + +RV
Sbjct: 73 KI--------------------DPSKKGVQGLVIAPTRELAIQTQEELFRLGRDKKIRVQ 112
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK P++VVGTPGRL + +S + ++L + VLDEAD M+
Sbjct: 113 AVYGGADINRQIRQLKENPQIVVGTPGRLLDHIS---RRTLKLGAVETLVLDEADEMLNM 169
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++SII +P + RQTL+FSAT+ +
Sbjct: 170 GFLEDIESIIKQVP------------------------ENRQTLLFSATMPDDIKRIGVQ 205
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K +H +KS + + A +++ F++CK+
Sbjct: 206 FMKDPEHVRIKSNE------------------------------MTATLIDQYFVKCKDY 235
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + +L V TIVF + + ++ L++ G +H + Q+ R+ +
Sbjct: 236 EKFDIMTRLLDVQTPELTIVFGRTKRRVDELARGLEMRGYRAEGIHGDLSQQKRMSVL 293
>gi|396488909|ref|XP_003842973.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
gi|312219551|emb|CBX99494.1| similar to ATP-dependent RNA helicase DRS1 [Leptosphaeria maculans
JN3]
Length = 811
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 158/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F EPTPIQ IP A QGKDV+G AETGSGKT AF +PI+
Sbjct: 281 SFQAMSLSRPILRGLAAVGFSEPTPIQNKAIPIAM-QGKDVVGGAETGSGKTAAFLIPIL 339
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R I PTRELA+Q + +A ++
Sbjct: 340 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 380
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ GG ST+ QE +LK RP+VV+ TPGR + M VE L VLDEADRM
Sbjct: 381 TFALMAGGFSTKDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 438
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E G +L I+ +P K RQT++FSAT+ + D
Sbjct: 439 LEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSTVD-- 472
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFI---ECK 469
+L R GM V + VD V L + FI + K
Sbjct: 473 -RLI---------------------RIGMDKPVRLMVDAKKHTV--KGLTQEFIRLRQGK 508
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + AYL YI R I+F + + + G+ LH M Q R++
Sbjct: 509 EDRRLAYLMYICEKFYNERVIIFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQ 566
>gi|403412636|emb|CCL99336.1| predicted protein [Fibroporia radiculosa]
Length = 974
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 156/341 (45%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++++ +L FK PT IQ +P A QG+D+IG A TGSGKT AF LPI+Q+L EE
Sbjct: 548 LLEALEQLNFKHPTDIQVEALPHAL-QGRDIIGVASTGSGKTAAFALPILQKLWEE---- 602
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A ++ PTRELA Q++ +G+ + VR V IVGG+
Sbjct: 603 ---------------PKG-LFACVLAPTRELAYQISQQFEGLGSAMGVRCVTIVGGLDMM 646
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP +VV TPGRL + + + L L F VLDEADR+++ + I
Sbjct: 647 AQSVALAKRPHIVVATPGRLIDHLENTKG--FSLRGLKFLVLDEADRLLDMDFGPIIDKI 704
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P K+R T +FSAT+ KL+ SL +
Sbjct: 705 LKIIP------------------------KERTTYLFSATMTTKV---AKLQRASLSNPV 737
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V T+S L + ++ KD +L Y+ +
Sbjct: 738 RVEVSEKYSTVS----------------------TLLQYYLFIPLVQKDVHLIYLANTLA 775
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
Q I+F ++ + +S +L+ LG LH Q+ Q ARL
Sbjct: 776 QNSIIIFTRTVHDAQRLSIILRTLGFPAVPLHGQLSQSARL 816
>gi|257899462|ref|ZP_05679115.1| helicase [Enterococcus faecium Com15]
gi|293573030|ref|ZP_06683972.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430842364|ref|ZP_19460279.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|431081588|ref|ZP_19495678.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|431118220|ref|ZP_19498174.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|431592214|ref|ZP_19521450.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|431738949|ref|ZP_19527889.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|431740772|ref|ZP_19529683.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
gi|257837374|gb|EEV62448.1| helicase [Enterococcus faecium Com15]
gi|291606932|gb|EFF36312.1| cold-shock deAd box protein a [Enterococcus faecium E980]
gi|430493445|gb|ELA69748.1| DEAD/DEAH box helicase [Enterococcus faecium E1007]
gi|430565520|gb|ELB04666.1| DEAD/DEAH box helicase [Enterococcus faecium E1604]
gi|430568177|gb|ELB07234.1| DEAD/DEAH box helicase [Enterococcus faecium E1613]
gi|430591839|gb|ELB29866.1| DEAD/DEAH box helicase [Enterococcus faecium E1861]
gi|430596492|gb|ELB34316.1| DEAD/DEAH box helicase [Enterococcus faecium E1972]
gi|430602855|gb|ELB40405.1| DEAD/DEAH box helicase [Enterococcus faecium E2039]
Length = 503
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKSPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|121700981|ref|XP_001268755.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
gi|142982514|sp|A1CNV8.1|DRS1_ASPCL RecName: Full=ATP-dependent RNA helicase drs1
gi|119396898|gb|EAW07329.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
Length = 826
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 158/355 (44%), Gaps = 72/355 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F PTPIQ+ IP A GKD++G+A TGSGKT AF +PI+
Sbjct: 307 SFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL-LGKDIVGSAVTGSGKTAAFVVPIL 365
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RLL K R I+ PTRELA+Q + +A +V
Sbjct: 366 ERLLFRPRKVPTS-----------------RVAILMPTRELAVQCYNVATKLATHTDVTF 408
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM+E
Sbjct: 409 CQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDEADRMLE 466
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+G EL I+ +P K RQT++FSAT+ S D +
Sbjct: 467 DGFADELNEILTTIP------------------------KSRQTMLFSATMTDSVDKLIR 502
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KEED 472
+ GLN R +VD + L + F+ +E
Sbjct: 503 V------------GLN-----------RPVRLMVDSKKNTSM--NLTQEFVRLRPGREGK 537
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ YL Y+ S GR IVF + + +LG+ LH M Q R+K
Sbjct: 538 RLGYLLYLCSEIFTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIK 592
>gi|302795308|ref|XP_002979417.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
gi|300152665|gb|EFJ19306.1| hypothetical protein SELMODRAFT_110816 [Selaginella moellendorffii]
Length = 749
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 200/427 (46%), Gaps = 87/427 (20%)
Query: 107 DGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVN 166
D D DG+E+ Q++E++ + +K++ ++ K+++ E+
Sbjct: 56 DVDQDGEEENDDEQREEDRGQDSTDEDEKEQLDHSQRKKSLDSK---------KEKPQFF 106
Query: 167 EAEISTEFDA--WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+ F+A + EL + L+++ L +++PTPIQ ACIP A G+D+ G+A TGS
Sbjct: 107 SSNHGASFNASSFIELNVSRPLLRACDALGYRQPTPIQAACIPLAL-AGRDICGSAVTGS 165
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTD 282
GKT AF LPI++RLL + P+ +R LIITPTRELA+Q+
Sbjct: 166 GKTAAFALPILERLL-------------------FRPRRIPAIRVLIITPTRELAVQLHS 206
Query: 283 HLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTL 342
++ +A+ ++R +VGG+S++ QE L+ P++VV TPGR+ + + + V L L
Sbjct: 207 MIEKLAQFTDIRCSLVVGGLSSKVQEVALRTHPDIVVATPGRMIDHLRNTQS--VGLEEL 264
Query: 343 SFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVF 402
+ VLDEADR++E G E+ ++ + P +RQT++F
Sbjct: 265 AILVLDEADRLLELGFREEIHELVKLCP------------------------SRRQTMLF 300
Query: 403 SATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLE 462
SAT+ D +L SLKS ++ S E S L
Sbjct: 301 SATM---TDEVSELIKLSLKSPVRLSADPSTERPS----------------------TLT 335
Query: 463 ESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
E I + E DK+A + + S + +TI+F + + L + G+ LH
Sbjct: 336 EEVIRIRAGHEGDKEAIVLSLCSRSLKSKTIIFSGTKVEAHRLKILFGLSGLKSAELHGN 395
Query: 520 MQQRARL 526
+ Q RL
Sbjct: 396 LTQAQRL 402
>gi|226509858|ref|NP_001147574.1| ATP-dependent RNA helicase DRS1 [Zea mays]
gi|195612276|gb|ACG27968.1| ATP-dependent RNA helicase DRS1 [Zea mays]
Length = 770
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 138/255 (54%), Gaps = 48/255 (18%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
++GP D + + +++ EL L L+++ L +++PTPIQ ACIP A G
Sbjct: 141 TSGPVDPSNFFASSEGATFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TG 199
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIIT 271
+D+ G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 200 RDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 240
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA QV ++ +A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 241 PTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRN 300
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 301 SLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP--------------------- 337
Query: 392 LQRKKRQTLVFSATI 406
K+RQT++FSAT+
Sbjct: 338 ---KRRQTMLFSATM 349
>gi|257064977|ref|YP_003144649.1| DNA/RNA helicase [Slackia heliotrinireducens DSM 20476]
gi|256792630|gb|ACV23300.1| DNA/RNA helicase, superfamily II [Slackia heliotrinireducens DSM
20476]
Length = 657
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 175/364 (48%), Gaps = 76/364 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++E L + ++Y L ++EPTPIQ+ IP +G+D+I AA+TG+GKT AF LP M
Sbjct: 9 FDESGLSATALAAVYDLGYEEPTPIQQQAIPVVL-EGRDLIAAAKTGTGKTAAFALPTMD 67
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII-TPTRELALQVTDHLKGVAKGINVRV 295
+L YA KG ++I TPTRELA+Q+++ + +AK N RV
Sbjct: 68 KL-------------------PYAGKGEGPVMVIVTPTRELAMQISEVCETIAKRTNHRV 108
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
V ++GG+S Q + L++ ++++ TPGRL +LM +H +L + VLDEADRM++
Sbjct: 109 VTLLGGVSYTPQIKKLRSGCDIIIATPGRLLDLM---RQHEADLDLVQVLVLDEADRMLD 165
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G + ++ I+D P +RQTL+FSATI S D
Sbjct: 166 MGFWPQVSEIVDATP------------------------SERQTLLFSATIDRSQD---- 197
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
K + LN E I+++++ A+ +++ I +K A
Sbjct: 198 --------KVMFSLLNHPE-------------IIEISHRGDTADLVDQYIIWTGRREKPA 236
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA---QMQQRARLKLFSQM 532
L + G R IVF + + + L +GI +HA Q Q++ L+ F +
Sbjct: 237 LLNAFIREKGGFRVIVFTKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREG 296
Query: 533 ITWI 536
T +
Sbjct: 297 KTHV 300
>gi|50557160|ref|XP_505988.1| YALI0F28391p [Yarrowia lipolytica]
gi|74659615|sp|Q6C024.1|PRP28_YARLI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49651858|emb|CAG78800.1| YALI0F28391p [Yarrowia lipolytica CLIB122]
Length = 575
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 143/241 (59%), Gaps = 21/241 (8%)
Query: 170 ISTEFDAWNELRLHPLLMK-SIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
I +WNE + P +++ +I R+ +KEPTPIQ+A IP A +DVIG AETGSGKT
Sbjct: 157 IPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGI-RDVIGVAETGSGKTA 215
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
+F +P++ + E L E ++ P G LI+ PTRELA+Q+ D
Sbjct: 216 SFLIPLISYICE--------LPKLDERSKVNGPYG----LILAPTRELAMQIKDEAVKFC 263
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
+ +VV +VGG S ++Q ++ E++V TPGRL +++ ++ L+ L+ + V+D
Sbjct: 264 APLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVI---DRRLLVLNQCCYVVMD 320
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRM++ G ++Q ++ LP +N K S++ +N VS+ R+ RQT++++AT+ +
Sbjct: 321 EADRMVDMGFEEQVQKVLASLPSSNA--KPDSDEAENLAAVST--RRYRQTMMYTATMPV 376
Query: 409 S 409
+
Sbjct: 377 A 377
>gi|425769747|gb|EKV08230.1| ATP-dependent RNA helicase , putative [Penicillium digitatum Pd1]
gi|425771396|gb|EKV09840.1| ATP-dependent RNA helicase , putative [Penicillium digitatum PHI26]
Length = 494
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 177/383 (46%), Gaps = 74/383 (19%)
Query: 147 VEESVAVSNGPDDAEEELVNEAEISTEFDA---WNELRLHPLLMKSIYRLQFKEPTPIQK 203
VE+ + SN A++ V+ A TE A + EL L L ++ ++ +K PTPIQ
Sbjct: 41 VEDGASDSNTQPTADDPNVDGASSETEPSAPKTFKELGLIDSLCEACDKMGYKAPTPIQS 100
Query: 204 ACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG 263
IP A QG+D+IG AETGSGKT +F LPI+Q L+E+ +
Sbjct: 101 ESIPLAL-QGRDIIGLAETGSGKTASFVLPILQALMEKPQP------------------- 140
Query: 264 HLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPG 323
L++ PTRELA Q++ + + INVR +VGGM Q L +P ++V TPG
Sbjct: 141 -FFGLVMAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKPHIIVATPG 199
Query: 324 RLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQT 383
RL + + + L L F V+DEADR+++ L I+ +LP
Sbjct: 200 RLLDHLENTKGF--SLRNLKFLVMDEADRLLDMDFGPILDKILKVLP------------- 244
Query: 384 QNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR 443
++R+T +FSAT++ + +E+L +RA +
Sbjct: 245 -----------RERRTFLFSATLS-----------------------SKVESL-QRASLS 269
Query: 444 ANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHIS 503
+ ++ L++++I + KD YL Y+L I+F ++ + ++
Sbjct: 270 NPARVSISSSKYATVETLQQTYILRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVA 329
Query: 504 SLLKILGIDVWTLHAQMQQRARL 526
LL+ LG LH QM Q ARL
Sbjct: 330 FLLRGLGFGAIPLHGQMSQSARL 352
>gi|260558407|ref|ZP_05830603.1| helicase [Enterococcus faecium C68]
gi|261207113|ref|ZP_05921802.1| helicase [Enterococcus faecium TC 6]
gi|289567232|ref|ZP_06447617.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|293556891|ref|ZP_06675452.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|293567807|ref|ZP_06679148.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|294615128|ref|ZP_06695014.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|294617803|ref|ZP_06697416.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|406579294|ref|ZP_11054526.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|406581588|ref|ZP_11056725.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|406584027|ref|ZP_11059065.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|406589825|ref|ZP_11064245.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410938072|ref|ZP_11369930.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|424789110|ref|ZP_18215819.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|424953765|ref|ZP_18368708.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|424962400|ref|ZP_18376756.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|424963599|ref|ZP_18377803.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|424970725|ref|ZP_18384213.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|424978089|ref|ZP_18391038.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|425038208|ref|ZP_18442830.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|425058609|ref|ZP_18461987.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|425060636|ref|ZP_18463922.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|427397059|ref|ZP_18889685.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430820898|ref|ZP_19439518.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430823396|ref|ZP_19441967.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430826317|ref|ZP_19444503.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430828899|ref|ZP_19447010.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430834757|ref|ZP_19452759.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430836494|ref|ZP_19454473.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430839412|ref|ZP_19457353.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430843175|ref|ZP_19461076.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430850821|ref|ZP_19468578.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430853175|ref|ZP_19470905.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430858894|ref|ZP_19476513.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430861435|ref|ZP_19478942.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430866428|ref|ZP_19481705.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430892938|ref|ZP_19484559.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430952632|ref|ZP_19486438.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|431000766|ref|ZP_19488247.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|431234137|ref|ZP_19502906.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|431256501|ref|ZP_19504856.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|431303424|ref|ZP_19508271.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|431380394|ref|ZP_19510775.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|431441111|ref|ZP_19513326.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|431506774|ref|ZP_19515600.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|431725207|ref|ZP_19525416.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|431744090|ref|ZP_19532962.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|431747114|ref|ZP_19535916.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|431760196|ref|ZP_19548798.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|431765027|ref|ZP_19553551.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
gi|260075581|gb|EEW63887.1| helicase [Enterococcus faecium C68]
gi|260078741|gb|EEW66443.1| helicase [Enterococcus faecium TC 6]
gi|289160980|gb|EFD08895.1| ATP-dependent RNA helicase exp9 [Enterococcus faecium D344SRF]
gi|291589392|gb|EFF21199.1| cold-shock deAd box protein a [Enterococcus faecium E1071]
gi|291592070|gb|EFF23693.1| Putative ATP-dependent RNA helicase [Enterococcus faecium E1636]
gi|291595943|gb|EFF27223.1| ATP-dependent RNA helicase [Enterococcus faecium E1679]
gi|291600975|gb|EFF31266.1| ATP-dependent RNA helicase [Enterococcus faecium E1039]
gi|402922578|gb|EJX42943.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
V689]
gi|402938304|gb|EJX57320.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R494]
gi|402940682|gb|EJX59477.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1986]
gi|402948694|gb|EJX66809.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1190]
gi|402960765|gb|EJX77866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1139]
gi|402963120|gb|EJX80012.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1123]
gi|403019904|gb|EJY32478.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 513]
gi|403038013|gb|EJY49253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 504]
gi|403042418|gb|EJY53373.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 503]
gi|404455599|gb|EKA02443.1| DEAD/DEAH box helicase [Enterococcus sp. GMD4E]
gi|404459354|gb|EKA05720.1| DEAD/DEAH box helicase [Enterococcus sp. GMD3E]
gi|404464924|gb|EKA10437.1| DEAD/DEAH box helicase [Enterococcus sp. GMD2E]
gi|404470265|gb|EKA14916.1| DEAD/DEAH box helicase [Enterococcus sp. GMD1E]
gi|410733711|gb|EKQ75634.1| DEAD/DEAH box helicase [Enterococcus sp. GMD5E]
gi|425722385|gb|EKU85280.1| hypothetical protein HMPREF9307_01861 [Enterococcus durans
FB129-CNAB-4]
gi|430439035|gb|ELA49418.1| DEAD/DEAH box helicase [Enterococcus faecium E0045]
gi|430442109|gb|ELA52157.1| DEAD/DEAH box helicase [Enterococcus faecium E0120]
gi|430445197|gb|ELA54971.1| DEAD/DEAH box helicase [Enterococcus faecium E0164]
gi|430482561|gb|ELA59676.1| DEAD/DEAH box helicase [Enterococcus faecium E0269]
gi|430484826|gb|ELA61773.1| DEAD/DEAH box helicase [Enterococcus faecium E0679]
gi|430488294|gb|ELA64976.1| DEAD/DEAH box helicase [Enterococcus faecium E0680]
gi|430490870|gb|ELA67366.1| DEAD/DEAH box helicase [Enterococcus faecium E0688]
gi|430497924|gb|ELA73941.1| DEAD/DEAH box helicase [Enterococcus faecium E1050]
gi|430535180|gb|ELA75603.1| DEAD/DEAH box helicase [Enterococcus faecium E1185]
gi|430540997|gb|ELA81174.1| DEAD/DEAH box helicase [Enterococcus faecium E1258]
gi|430544740|gb|ELA84762.1| DEAD/DEAH box helicase [Enterococcus faecium E1552]
gi|430549900|gb|ELA89710.1| DEAD/DEAH box helicase [Enterococcus faecium E1573]
gi|430551656|gb|ELA91407.1| DEAD/DEAH box helicase [Enterococcus faecium E1574]
gi|430555404|gb|ELA94942.1| DEAD/DEAH box helicase [Enterococcus faecium E1575]
gi|430557231|gb|ELA96699.1| DEAD/DEAH box helicase [Enterococcus faecium E1576]
gi|430562425|gb|ELB01657.1| DEAD/DEAH box helicase [Enterococcus faecium E1578]
gi|430573163|gb|ELB11993.1| DEAD/DEAH box helicase [Enterococcus faecium E1622]
gi|430577603|gb|ELB16190.1| DEAD/DEAH box helicase [Enterococcus faecium E1623]
gi|430580065|gb|ELB18545.1| DEAD/DEAH box helicase [Enterococcus faecium E1626]
gi|430582262|gb|ELB20689.1| DEAD/DEAH box helicase [Enterococcus faecium E1627]
gi|430586467|gb|ELB24719.1| DEAD/DEAH box helicase [Enterococcus faecium E1630]
gi|430587161|gb|ELB25394.1| DEAD/DEAH box helicase [Enterococcus faecium E1634]
gi|430595854|gb|ELB33732.1| DEAD/DEAH box helicase [Enterococcus faecium E1904]
gi|430605718|gb|ELB43100.1| DEAD/DEAH box helicase [Enterococcus faecium E2071]
gi|430607222|gb|ELB44549.1| DEAD/DEAH box helicase [Enterococcus faecium E2134]
gi|430624005|gb|ELB60656.1| DEAD/DEAH box helicase [Enterococcus faecium E3346]
gi|430629510|gb|ELB65910.1| DEAD/DEAH box helicase [Enterococcus faecium E4215]
Length = 503
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKNPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|16549139|dbj|BAB70762.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ +P A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAVPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|45659052|ref|YP_003138.1| ATP-dependent RNA helicase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45602298|gb|AAS71775.1| ATP-dependent RNA helicase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 521
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 70 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 109
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E+ + VLDEAD M++
Sbjct: 110 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIV---VLDEADEMLD 166
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 167 MGFREDMEFILKDTPA------------------------DRQTIMFSATMT-------- 194
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 195 ---------------DDVLTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 237
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ S
Sbjct: 238 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMS 292
>gi|284048361|ref|YP_003398700.1| DEAD/DEAH box helicase [Acidaminococcus fermentans DSM 20731]
gi|283952582|gb|ADB47385.1| DEAD/DEAH box helicase domain protein [Acidaminococcus fermentans
DSM 20731]
Length = 544
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 177/358 (49%), Gaps = 75/358 (20%)
Query: 168 AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKT 227
AE E ++ +L L ++ ++ + F+EP+PIQK IP A +G+D+IG A+TG+GKT
Sbjct: 12 AESKPEITSFEDLNLDRKILAALKEMGFEEPSPIQKGAIPMAL-EGEDLIGQAQTGTGKT 70
Query: 228 LAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV 287
AFG+PI+Q++ E+++ H++AL+++PTREL +QV D + +
Sbjct: 71 AAFGIPIIQKI-NEKDR-------------------HIQALVMSPTRELCIQVADEISKI 110
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
K +RV+P+ GG E+Q R LK +VV+GTPGRL + + G ++L ++F VL
Sbjct: 111 GKTKRIRVLPVYGGQPIERQIRSLKRGIQVVIGTPGRLLDHIRRGT---IDLEYVNFLVL 167
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEAD M++ G ++++II +P +RQT++FSAT+
Sbjct: 168 DEADEMLDMGFVDDMENIIKNVP------------------------PERQTMLFSATMP 203
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
I ++S++ MRA +V + V A +++ + E
Sbjct: 204 -----------------------RPILSISKKY-MRAP-KVVAIHKEVVTAPTIDQYYYE 238
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+ DK L IL + I+FC + + + L G + LH + Q R
Sbjct: 239 TR--DKVDGLCRILDTTDDCKMIIFCRTKKGVDELVIALATRGYEAEGLHGDLSQNQR 294
>gi|414589946|tpg|DAA40517.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 773
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 139/260 (53%), Gaps = 48/260 (18%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
++GP D + S +++ EL L L+++ L +++PTPIQ ACIP A G
Sbjct: 146 TSGPVDPSNFFSSSDRASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TG 204
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIIT 271
+D+ G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 205 RDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 245
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA Q+ ++ +A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 246 PTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATPGRIIDHLRN 305
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 306 SLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP--------------------- 342
Query: 392 LQRKKRQTLVFSATIALSAD 411
K+RQT++FSAT+ D
Sbjct: 343 ---KRRQTMLFSATMTEEID 359
>gi|398334959|ref|ZP_10519664.1| ATP-dependent RNA helicase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 531
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NEL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 11 FNELNLSTEIQNAIAEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 70 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 109
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG ++Q R L+ P++V+ TPGR+ + M G + L + +LDEAD M++
Sbjct: 110 VPVYGGQEIDRQLRALRKNPQIVIATPGRMMDHMRRGS---IRLEDIKIVILDEADEMLD 166
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 167 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 194
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + N I+D+T+ + A K+E+ + E +E K
Sbjct: 195 ---------------DDILTLMKR--FQKNPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 237
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 238 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 292
>gi|431208676|ref|ZP_19500889.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
gi|430570682|gb|ELB09622.1| DEAD/DEAH box helicase [Enterococcus faecium E1620]
Length = 503
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKNPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|414886235|tpg|DAA62249.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 770
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 138/255 (54%), Gaps = 48/255 (18%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
++GP D + + +++ EL L L+++ L +++PTPIQ ACIP A G
Sbjct: 141 TSGPVDPSNFFASSEGATFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TG 199
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIIT 271
+D+ G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 200 RDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 240
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA QV ++ +A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 241 PTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRN 300
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 301 SLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP--------------------- 337
Query: 392 LQRKKRQTLVFSATI 406
K+RQT++FSAT+
Sbjct: 338 ---KRRQTMLFSATM 349
>gi|423721477|ref|ZP_17695659.1| DEAD/DEAH box helicase family protein [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365528|gb|EID42823.1| DEAD/DEAH box helicase family protein [Geobacillus
thermoglucosidans TNO-09.020]
Length = 465
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L LMK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+P+++
Sbjct: 4 FYELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNKDVIGQAQTGTGKTAAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ D EA ++ L++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV------------DVTNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK RP ++VGTPGR+ + ++ HL +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIGRQIRALKKRPHIIVGTPGRIIDHINRKTLHLENVHTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 160 GFIDDIEAILSNVP------------------------EKRQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I ++ER + + V M V +++ ++E +E+ K
Sbjct: 187 --------------EPIRRIAERFMNKPQIVKVKAKEMTV--PNIQQYYLEVQEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|325087574|gb|EGC40884.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus H88]
Length = 485
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 178/385 (46%), Gaps = 74/385 (19%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+E + +N DD ++ E ++ F +L + L ++ L +K PTPIQ IP
Sbjct: 35 DEQLTAANEQDDESPQVQREEAVTKSF---KDLGIIDSLCEACEALGYKSPTPIQAESIP 91
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
A QG+D+IG AETGSGKT AF LPI+Q L+ + + L
Sbjct: 92 LAL-QGRDLIGLAETGSGKTAAFALPILQALMNKPQS--------------------LFG 130
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+ PTRELA Q+++ + + I+VR IVGGM Q L +P ++V TPGRL +
Sbjct: 131 LILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLD 190
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ + L L + V+DEADR+++ L I+ +LP
Sbjct: 191 HLENTKG--FSLRNLKYLVMDEADRLLDLDFGPILDKILKVLP----------------- 231
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
++R+T +FSAT++ + +E+L +RA + +
Sbjct: 232 -------RERRTYLFSATMS-----------------------SKVESL-QRASLSNPLR 260
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
+ +N L +S++ + KD YL Y+L+ + IVF ++ + ++ LL+
Sbjct: 261 VSISSNKYQTVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLR 320
Query: 508 ILGIDVWTLHAQMQQRARLKLFSQM 532
LG LH Q+ Q +RL S+
Sbjct: 321 TLGFGSIPLHGQLSQSSRLGALSKF 345
>gi|299829301|ref|NP_001015005.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Rattus norvegicus]
gi|149049184|gb|EDM01638.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Rattus
norvegicus]
Length = 455
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 73/376 (19%)
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
+A PD E L AE E + +L + +L ++ +L + +PT IQ IP A
Sbjct: 1 MAADEEPDSPTEALQTAAE-EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL 59
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
QG+D+IG AETGSGKT AF LPI+ LLE ++ L AL++
Sbjct: 60 -QGRDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVL 98
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + +
Sbjct: 99 TPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLE 158
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ L L + V+DEADR++ E+ I+ ++P
Sbjct: 159 NTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP-------------------- 196
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 ----RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV-------------- 235
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 --------EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 287
Query: 511 IDVWTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 288 FTAIPLHGQMSQSKRL 303
>gi|307167913|gb|EFN61290.1| Probable ATP-dependent RNA helicase DDX49 [Camponotus floridanus]
Length = 457
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 76/365 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E +++L+L+ L+ + K PT IQ+ CIP G+D IG A+TGSGKTLAF L
Sbjct: 3 EIKDFSDLKLNSWLLAQCDTMGLKNPTLIQQNCIPRIL-AGEDCIGCAKTGSGKTLAFAL 61
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q+L E+ P G + AL++TPTRELA Q+ D + K IN
Sbjct: 62 PILQKLCED-------------------PYG-IFALVLTPTRELAFQIADQFAAIGKAIN 101
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++ +VGGM Q L RP +VV TPGRL + + + L + F VLDEADR
Sbjct: 102 LKKCVVVGGMDMMVQGLELSKRPHIVVATPGRLADHLDSCDTF--SLQKIKFLVLDEADR 159
Query: 353 MIENGHF-RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
++ GHF ++L+ I +P K++Q L+FSAT+ + D
Sbjct: 160 LL-GGHFDKQLKKIFAAVP------------------------KQKQVLLFSATMTDALD 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
K KQ + I + AG+ +L++ ++ C ++
Sbjct: 195 ----------KVKQIASSKVFIWEEEDDAGIAT-------------VRELDQRYVLCPKD 231
Query: 472 DKDAYLYYIL----SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
D++L ++ + + G ++F + + +S +L +G LHA ++Q+ RL
Sbjct: 232 VLDSFLVEVIRTFRATNKNGSIMIFTDTCKHCQLLSMMLNDVGFTNMALHAMIKQKERLA 291
Query: 528 LFSQM 532
S+
Sbjct: 292 ALSKF 296
>gi|336115431|ref|YP_004570198.1| DEAD/DEAH box helicase [Bacillus coagulans 2-6]
gi|335368861|gb|AEH54812.1| DEAD/DEAH box helicase domain protein [Bacillus coagulans 2-6]
Length = 475
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 173/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L P ++K++ R+ F+E +PIQ A IP QGKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNLSPAILKAVKRMGFEEASPIQAATIPLTM-QGKDIIGQAQTGTGKTAAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + R + +++ +II PTRELA+QV++ L + + V V+
Sbjct: 63 KI-DHRSR-------------------NIQGIIIAPTRELAIQVSEELYRIGQYSRVHVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK P+++VGTPGR+ + + G L +HTL VLDEAD M+
Sbjct: 103 AVYGGQDISRQIRALKNHPQIIVGTPGRILDHIHRGTLKLDHVHTL---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P K RQT++FSAT+
Sbjct: 160 GFIDDIEAILSTVP------------------------KDRQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V + +E+ +I+ +E +K
Sbjct: 187 --------------DPIRKIAERFMNNPELVRVKAKEMTVPS--IEQYYIKVQEREKFDV 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L V IVF + + +++ L + G +H + Q RL + +
Sbjct: 231 LSRLLDVQSPDLAIVFGRTKRRVDELANALTLRGYLAEGIHGDLSQAKRLSVLRKF 286
>gi|294828452|ref|NP_714230.2| DEAD/DEAH box helicase [Leptospira interrogans serovar Lai str.
56601]
gi|386075655|ref|YP_005989975.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Lai str.
IPAV]
gi|417761735|ref|ZP_12409740.1| DEAD/DEAH box helicase [Leptospira interrogans str. 2002000624]
gi|417772943|ref|ZP_12420829.1| DEAD/DEAH box helicase [Leptospira interrogans str. 2002000621]
gi|417786009|ref|ZP_12433706.1| DEAD/DEAH box helicase [Leptospira interrogans str. C10069]
gi|418667264|ref|ZP_13228676.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|418670922|ref|ZP_13232283.1| DEAD/DEAH box helicase [Leptospira interrogans str. 2002000623]
gi|418702416|ref|ZP_13263324.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Bataviae
str. L1111]
gi|418727173|ref|ZP_13285768.1| DEAD/DEAH box helicase [Leptospira interrogans str. UI 12621]
gi|421083601|ref|ZP_15544475.1| DEAD/DEAH box helicase [Leptospira santarosai str. HAI1594]
gi|421101495|ref|ZP_15562107.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421121759|ref|ZP_15582049.1| DEAD/DEAH box helicase [Leptospira interrogans str. Brem 329]
gi|293386306|gb|AAN51248.2| DEAD/DEAH box helicase [Leptospira interrogans serovar Lai str.
56601]
gi|353459447|gb|AER03992.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Lai str.
IPAV]
gi|409942468|gb|EKN88080.1| DEAD/DEAH box helicase [Leptospira interrogans str. 2002000624]
gi|409950838|gb|EKO05360.1| DEAD/DEAH box helicase [Leptospira interrogans str. C10069]
gi|409959414|gb|EKO23184.1| DEAD/DEAH box helicase [Leptospira interrogans str. UI 12621]
gi|410345096|gb|EKO96215.1| DEAD/DEAH box helicase [Leptospira interrogans str. Brem 329]
gi|410368667|gb|EKP24043.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433962|gb|EKP78299.1| DEAD/DEAH box helicase [Leptospira santarosai str. HAI1594]
gi|410577278|gb|EKQ40274.1| DEAD/DEAH box helicase [Leptospira interrogans str. 2002000621]
gi|410582080|gb|EKQ49880.1| DEAD/DEAH box helicase [Leptospira interrogans str. 2002000623]
gi|410756867|gb|EKR18485.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|410758585|gb|EKR24814.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Bataviae
str. L1111]
gi|455788315|gb|EMF40307.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Lora str. TE
1992]
gi|456823568|gb|EMF72005.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Canicola
str. LT1962]
gi|456984487|gb|EMG20533.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 516
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E+ + VLDEAD M++
Sbjct: 105 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIV---VLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDVLTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ S
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMS 287
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 166/370 (44%), Gaps = 72/370 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EE+ +A ++ ++ E L +++ + + F PTPIQ+ IP A GKD++G+A
Sbjct: 284 EEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVAL-LGKDIVGSA 342
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKT AF +PI++RLL K R I+ PTRELA+Q
Sbjct: 343 VTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQC 385
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 386 YNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVD-- 443
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 444 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 479
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ S D ++ GLN L + N A+
Sbjct: 480 LFSATMTDSVDKLIRV------------GLNRPVRLM--VDTKKNTAVT----------- 514
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQ---GRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
L + F+ + +D L Y+L + + GR IVF + + +LG+ LH
Sbjct: 515 LVQEFVRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELH 574
Query: 518 AQMQQRARLK 527
M Q R+K
Sbjct: 575 GSMSQEQRIK 584
>gi|344303537|gb|EGW33786.1| ATP-dependent rRNA helicase RRP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 475
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 168/354 (47%), Gaps = 72/354 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+F +++EL+L P L++SI ++F +PTPIQ IP A +G D+IG A+TGSGKT AF +
Sbjct: 61 KFKSFSELKLVPELLESIQSMKFTKPTPIQSEAIPHAL-EGHDIIGLAQTGSGKTAAFAI 119
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q L E + AL++ PTRELA Q+ + + +
Sbjct: 120 PILQALWEAQSPYF--------------------ALVLAPTRELAFQIKETFDALGSTMG 159
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R V IVGGM Q R L +P V+V TPGR+ + + + +L L + V+DEADR
Sbjct: 160 LRSVCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLETTKG--FKLKDLKYLVMDEADR 217
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ L I+ ++P KR T +FSAT+
Sbjct: 218 LLDMDFGPALDRILKVIP------------------------TKRTTYLFSATMT----- 248
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
N IE L +RA + N V +++ A+ L +S + +
Sbjct: 249 ------------------NKIEKL-QRASLH-NPVRVAVSSKYQTADNLVQSMMLVHDGY 288
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ L ++LS + IVF ++A + + L +ILG + LH Q+ Q RL
Sbjct: 289 KNTILIHLLSEYEGKLIIVFTRTVAHAQRTALLCRILGFNAVPLHGQLSQAQRL 342
>gi|119494918|ref|XP_001264258.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
gi|142982588|sp|A1D1R8.1|DRS1_NEOFI RecName: Full=ATP-dependent RNA helicase drs1
gi|119412420|gb|EAW22361.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
Length = 819
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 161/360 (44%), Gaps = 72/360 (20%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
ST ++ + L +++ + + F PTPIQ+ IP A GKD++G+A TGSGKT AF
Sbjct: 295 STSNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL-LGKDIVGSAVTGSGKTAAF 353
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
+PI++RLL K R I+ PTRELA+Q + +A
Sbjct: 354 VVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQCYNVATKLATH 396
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
++ +VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEA
Sbjct: 397 TDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDEA 454
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DRM+E+G EL I+ +P + RQT++FSAT+ S
Sbjct: 455 DRMLEDGFADELNEILTTIPQS------------------------RQTMLFSATMTDSV 490
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC-- 468
D ++ GLN R +VD + L + F+
Sbjct: 491 DKLIRV------------GLN-----------RPVRLMVDSKKNTSM--NLTQEFVRLRP 525
Query: 469 -KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+E+ + YL Y+ + GR IVF + + +LG+ LH M Q R+K
Sbjct: 526 GREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQEQRIK 585
>gi|442762935|gb|JAA73626.1| Putative atp-dependent rna helicase, partial [Ixodes ricinus]
Length = 429
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 72/376 (19%)
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
+A P+ +E+ + + + E + L + +L ++ +L++K PT IQK IP A
Sbjct: 1 MAAPTEPEKSEDAKIVDLDDQEEEVTFKSLGIVDVLCEACEQLKWKSPTKIQKESIPLAL 60
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
QGKDVIG AETGSGKT +F LPI+Q LLE ++ L AL++
Sbjct: 61 -QGKDVIGLAETGSGKTGSFALPILQALLETPQR--------------------LFALVL 99
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
TPTRELA Q+++ + + GI V+ +VGG+ Q L +P VV+ TPGRL + +
Sbjct: 100 TPTRELAFQISEQFEALGAGIGVKCAVVVGGIDMMTQALTLAKKPHVVIATPGRLVDHLE 159
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ L L + V+DEADR++ E+ I+ ++P
Sbjct: 160 NTKGF--SLKALKYLVMDEADRILNMDFEEEVDKILRVIP-------------------- 197
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
++R T ++SAT+ +KL+ SLK V + +T+
Sbjct: 198 ----RERHTYLYSATMTKKV---QKLQRASLKDPVKVEVSSKYQTV-------------- 236
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
KL + ++ + KD YL ++L+ +VFC++ + + + LL+ LG
Sbjct: 237 --------EKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLG 288
Query: 511 IDVWTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 289 FTAIPLHGQMGQAKRL 304
>gi|333895980|ref|YP_004469854.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111245|gb|AEF16182.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 513
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 176/350 (50%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L+ ++K+I + F+EP+ IQ IP +G DVIG AETG+GKTLA+G PI+
Sbjct: 3 FKELHLNEKILKAIDDMGFEEPSKIQSEVIPVLL-EGLDVIGQAETGTGKTLAYGAPIIN 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ G + L++TPTRELA+QV D L + K VR++
Sbjct: 62 NF--------------------SSNDGKVFCLVLTPTRELAIQVNDELARIGKYSKVRLL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVRYLVIDEADEMMDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II N +N K+RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------KERQTMMFSATMP--------- 185
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I+ L+++ M+++ + + + + ++ + E K +++
Sbjct: 186 --------------DEIKNLAKKY-MKSDAKFISIVKKTMTVSTVQHFYYEVKNQERFES 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V TI+FC + + ++ ++ G +V +H M Q R+
Sbjct: 231 LCRILDVEEPSSTIIFCKTKKEVDELTENMQSRGYNVEGMHGDMSQNQRI 280
>gi|69248308|ref|ZP_00604710.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257878842|ref|ZP_05658495.1| helicase [Enterococcus faecium 1,230,933]
gi|257881478|ref|ZP_05661131.1| helicase [Enterococcus faecium 1,231,502]
gi|257890700|ref|ZP_05670353.1| helicase [Enterococcus faecium 1,231,410]
gi|293560261|ref|ZP_06676758.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|294621795|ref|ZP_06700954.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|314938932|ref|ZP_07846197.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|314943517|ref|ZP_07850284.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|314948188|ref|ZP_07851582.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|314951548|ref|ZP_07854594.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|314991589|ref|ZP_07857065.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|314994922|ref|ZP_07860049.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|383327538|ref|YP_005353422.1| DEAD/DEAH box helicase [Enterococcus faecium Aus0004]
gi|389867363|ref|YP_006374786.1| DEAD/DEAH box helicase [Enterococcus faecium DO]
gi|415892439|ref|ZP_11549927.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|416131873|ref|ZP_11597781.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|424795449|ref|ZP_18221304.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|424819380|ref|ZP_18244487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|424856321|ref|ZP_18280560.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|424949231|ref|ZP_18364921.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|424956289|ref|ZP_18371077.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|424967919|ref|ZP_18381589.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|424976047|ref|ZP_18389165.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|424981969|ref|ZP_18394659.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|424984734|ref|ZP_18397253.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|424987723|ref|ZP_18400084.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|424990961|ref|ZP_18403147.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|424995504|ref|ZP_18407380.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|424997413|ref|ZP_18409175.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|425000503|ref|ZP_18412062.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|425003235|ref|ZP_18414612.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|425006604|ref|ZP_18417774.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|425011167|ref|ZP_18422079.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|425013771|ref|ZP_18424487.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|425017560|ref|ZP_18428061.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|425022464|ref|ZP_18432645.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|425030171|ref|ZP_18435374.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|425033448|ref|ZP_18438416.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|425034930|ref|ZP_18439786.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|425040930|ref|ZP_18445364.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|425044373|ref|ZP_18448536.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|425047569|ref|ZP_18451517.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|425053412|ref|ZP_18456957.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|430831942|ref|ZP_19449990.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430847435|ref|ZP_19465272.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430855628|ref|ZP_19473336.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|431544298|ref|ZP_19518594.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|431749300|ref|ZP_19538042.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|431755816|ref|ZP_19544461.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|431767952|ref|ZP_19556395.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|431769544|ref|ZP_19557952.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|431773402|ref|ZP_19561727.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|431776500|ref|ZP_19564761.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|431779582|ref|ZP_19567775.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|431782613|ref|ZP_19570746.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|431784440|ref|ZP_19572479.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
gi|68194452|gb|EAN08953.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Enterococcus faecium DO]
gi|257813070|gb|EEV41828.1| helicase [Enterococcus faecium 1,230,933]
gi|257817136|gb|EEV44464.1| helicase [Enterococcus faecium 1,231,502]
gi|257827060|gb|EEV53686.1| helicase [Enterococcus faecium 1,231,410]
gi|291598627|gb|EFF29685.1| ATP-dependent RNA helicase [Enterococcus faecium U0317]
gi|291605711|gb|EFF35148.1| cold-shock deAd box protein a [Enterococcus faecium E1162]
gi|313590904|gb|EFR69749.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a01]
gi|313593873|gb|EFR72718.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133B]
gi|313596242|gb|EFR75087.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133A]
gi|313597889|gb|EFR76734.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133C]
gi|313641641|gb|EFS06221.1| DEAD/DEAH box helicase [Enterococcus faecium TX0133a04]
gi|313645321|gb|EFS09901.1| DEAD/DEAH box helicase [Enterococcus faecium TX0082]
gi|364093335|gb|EHM35615.1| cold-shock deAd box protein a [Enterococcus faecium E4453]
gi|364093511|gb|EHM35776.1| cold-shock deAd box protein a [Enterococcus faecium E4452]
gi|378937232|gb|AFC62304.1| DEAD-box ATP dependent DNA helicase [Enterococcus faecium Aus0004]
gi|388532612|gb|AFK57804.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium DO]
gi|402924387|gb|EJX44599.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
S447]
gi|402926241|gb|EJX46293.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R501]
gi|402930201|gb|EJX49880.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R499]
gi|402934931|gb|EJX54225.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R496]
gi|402946393|gb|EJX64674.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R446]
gi|402952005|gb|EJX69866.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1137]
gi|402953338|gb|EJX71063.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
P1140]
gi|402962168|gb|EJX79137.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV99]
gi|402967955|gb|EJX84466.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV69]
gi|402973745|gb|EJX89845.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV38]
gi|402977156|gb|EJX92995.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV168]
gi|402978215|gb|EJX93973.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV26]
gi|402986313|gb|EJY01444.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV165]
gi|402988977|gb|EJY03941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV161]
gi|402992431|gb|EJY07139.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV102]
gi|402996952|gb|EJY11308.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
ERV1]
gi|402997720|gb|EJY12029.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E422]
gi|403000335|gb|EJY14462.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
E417]
gi|403002697|gb|EJY16644.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C497]
gi|403004081|gb|EJY17911.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C621]
gi|403004113|gb|EJY17941.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
C1904]
gi|403009946|gb|EJY23359.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 515]
gi|403018997|gb|EJY31633.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 514]
gi|403027273|gb|EJY39167.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 511]
gi|403029941|gb|EJY41662.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 510]
gi|403030418|gb|EJY42102.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 506]
gi|403033364|gb|EJY44870.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 509]
gi|430480583|gb|ELA57757.1| DEAD/DEAH box helicase [Enterococcus faecium E0333]
gi|430537055|gb|ELA77408.1| DEAD/DEAH box helicase [Enterococcus faecium E1133]
gi|430546683|gb|ELA86626.1| DEAD/DEAH box helicase [Enterococcus faecium E1392]
gi|430592410|gb|ELB30425.1| DEAD/DEAH box helicase [Enterococcus faecium E1731]
gi|430611728|gb|ELB48804.1| DEAD/DEAH box helicase [Enterococcus faecium E2297]
gi|430616431|gb|ELB53345.1| DEAD/DEAH box helicase [Enterococcus faecium E2883]
gi|430630040|gb|ELB66417.1| DEAD/DEAH box helicase [Enterococcus faecium E1321]
gi|430636649|gb|ELB72713.1| DEAD/DEAH box helicase [Enterococcus faecium E2369]
gi|430636858|gb|ELB72912.1| DEAD/DEAH box helicase [Enterococcus faecium E1644]
gi|430640819|gb|ELB76647.1| DEAD/DEAH box helicase [Enterococcus faecium E2560]
gi|430641683|gb|ELB77478.1| DEAD/DEAH box helicase [Enterococcus faecium E4389]
gi|430647250|gb|ELB82698.1| DEAD/DEAH box helicase [Enterococcus faecium E6012]
gi|430649535|gb|ELB84911.1| DEAD/DEAH box helicase [Enterococcus faecium E6045]
Length = 503
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKNPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|315055611|ref|XP_003177180.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
gi|311339026|gb|EFQ98228.1| ATP-dependent rRNA helicase RRP3 [Arthroderma gypseum CBS 118893]
Length = 474
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 177/381 (46%), Gaps = 81/381 (21%)
Query: 156 GPDDA------EEELVNEAEISTEFD----AWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
PDDA E+E + E T + +L + L + L +K PTPIQ
Sbjct: 20 APDDASSGSELEQEALEEGSDETADTKVPKTFKDLGIIDSLCDACTSLGYKAPTPIQAES 79
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A QG+D++G AETGSGKT AF LPI+Q L+E+ P+ +
Sbjct: 80 IPLAL-QGRDLVGLAETGSGKTAAFALPILQALMEK-------------------PQPYF 119
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
L++ PTRELA+Q+++ + + I+VR IVGGM Q L +P ++V TPGRL
Sbjct: 120 -GLVLAPTRELAVQISESFEALGSLISVRCAVIVGGMDMISQSISLGKKPHIIVATPGRL 178
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L L + V+DEADR+++ L I+ +LP
Sbjct: 179 LDHLENTKGF--SLRNLKYLVMDEADRLLDLDFGPVLDKILKVLP--------------- 221
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + +E+L +RA +
Sbjct: 222 ---------RERRTYLFSATLS-----------------------SKVESL-QRASLSNP 248
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
+ + +N + L +S+I + KD YL +IL+ TI+F ++ + +S L
Sbjct: 249 LRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFPGQTTIIFTRTVNETQRLSIL 308
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ LG LH Q+ Q ARL
Sbjct: 309 LRALGFGAIPLHGQLSQSARL 329
>gi|239825779|ref|YP_002948403.1| DEAD/DEAH box helicase [Geobacillus sp. WCH70]
gi|239806072|gb|ACS23137.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. WCH70]
Length = 466
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L LMK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+P+++
Sbjct: 4 FHELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNKDVIGQAQTGTGKTAAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ D EA ++ L++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV------------DVKNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG E+Q R LK RP ++VGTPGR+ + ++ L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKRPHIIVGTPGRIIDHINRKTLRLDNVHTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 160 GFIDDIEAILSNVP------------------------EKRQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I ++ER ++ V M V +++ ++E +E+ K
Sbjct: 187 --------------EPIRRIAERFMNEPHIVKVKAKEMTV--PNIQQYYLEVQEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|414589947|tpg|DAA40518.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 786
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 138/255 (54%), Gaps = 48/255 (18%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
++GP D + S +++ EL L L+++ L +++PTPIQ ACIP A G
Sbjct: 162 TSGPVDPSNFFSSSDRASFHANSFLELNLSRPLVRACEALGYQKPTPIQAACIPLAL-TG 220
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIIT 271
+D+ G+A TGSGKT AF LP+++RLL + PK +R LI+T
Sbjct: 221 RDICGSAITGSGKTAAFSLPVLERLL-------------------FRPKRVPAIRVLILT 261
Query: 272 PTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSG 331
PTRELA Q+ ++ +A+ ++R IVGG+ST+ QE L++ P++VV TPGR+ + +
Sbjct: 262 PTRELAAQIHSMVEKLAQFTDIRCCLIVGGLSTKIQEVALRSMPDIVVATPGRIIDHLRN 321
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
V L L+ +LDEADR++E G E+Q +I M P
Sbjct: 322 SLS--VGLEDLAVVILDEADRLLELGFSAEIQELIRMCP--------------------- 358
Query: 392 LQRKKRQTLVFSATI 406
K+RQT++FSAT+
Sbjct: 359 ---KRRQTMLFSATM 370
>gi|330915742|ref|XP_003297149.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
gi|311330325|gb|EFQ94748.1| hypothetical protein PTT_07463 [Pyrenophora teres f. teres 0-1]
Length = 805
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 157/358 (43%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F EPTPIQ +P A QGKDV+G AETGSGKT AF +PI+
Sbjct: 276 SFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 334
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R I PTRELA+Q + +A ++
Sbjct: 335 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 375
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ GG ST QE +LK RP+VV+ TPGR + M VE L VLDEADRM
Sbjct: 376 TFALMAGGFSTRDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 433
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 434 LEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD-- 467
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFI---ECK 469
KL R GM V + VD V L + F+ + K
Sbjct: 468 -KLI---------------------RIGMDKPVRLMVDAKKHTVAG--LTQEFVRLRQGK 503
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + AYL YI + IVF + + + G+ LH M Q R++
Sbjct: 504 EDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQ 561
>gi|425055862|ref|ZP_18459326.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
gi|403033019|gb|EJY44552.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium 505]
Length = 503
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKSPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|431792618|ref|YP_007219523.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430782844|gb|AGA68127.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 500
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 168/364 (46%), Gaps = 83/364 (22%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ EL L L+KS+ + F+E TPIQ+ IP A +GKDVIG A+TG+GKT AFG+P
Sbjct: 1 MSTFKELGLSEPLIKSVLNMGFEEATPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGIP 59
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
++Q++ E E ++ +++TPTRELA+QV + L + + +
Sbjct: 60 LIQKIAETSE--------------------DIQGIVLTPTRELAVQVAEELNKIGQFKGI 99
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R +PI GG ++Q R LK RP ++V TPGRL + M + + L ++ +LDEAD M
Sbjct: 100 RTLPIYGGQEIDRQIRALKKRPHIIVATPGRLMDHM---RRRTIRLQNINMVILDEADEM 156
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----L 408
+ G ++++I+ +P + RQTL+FSAT+ L
Sbjct: 157 LNMGFVEDIETILQEIP------------------------EARQTLLFSATMPRQIQNL 192
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ F K + S+K K+ +AN +E+ ++E
Sbjct: 193 AQKFMKDPELISIKGKE-----------------------------VTVAN-IEQDYLEV 222
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKL 528
E+ K L +L + IVF + + + +S L G +H + Q R +
Sbjct: 223 PEKMKFDVLCRLLDIQSPDLAIVFGRTKSRVDELSEALNKRGYSAEGIHGDLSQSKRDSV 282
Query: 529 FSQM 532
Q
Sbjct: 283 MRQF 286
>gi|329121361|ref|ZP_08249987.1| RNA helicase DeaD [Dialister micraerophilus DSM 19965]
gi|327469770|gb|EGF15236.1| RNA helicase DeaD [Dialister micraerophilus DSM 19965]
Length = 497
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 73/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ + EL L +MK++ + F+EP+PIQK +P A QGKD+IG A+TG+GKT AFG+P
Sbjct: 8 YETFKELGLSEEIMKAVADMGFEEPSPIQKEAVPIAM-QGKDLIGQAQTGTGKTAAFGIP 66
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I+QR+ + K P+ A++++PTRELA+Q + + +A+ +N+
Sbjct: 67 ILQRI----------------DTSKPGPQ----AIVLSPTRELAIQSAEEINHLAQYMNI 106
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ +PI GG E+Q R LK + ++V TPGRL + M ++ ++L + VLDE D M
Sbjct: 107 KTIPIYGGQDIERQFRALKKKTNIIVATPGRLMDHM---KRKTIDLSNVQIAVLDEGDEM 163
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++++I+ P K+RQTL FSAT + A R
Sbjct: 164 VDMGFIDDIRTIMAATP------------------------KERQTLFFSAT--MPAPIR 197
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+ NS E ++A +DL +E+ +IE + K
Sbjct: 198 EL--------------ANSFLNEPEIVKIKAATVTIDL---------IEQEYIELPDRQK 234
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + ++ LK LH + Q+ R + Q
Sbjct: 235 FDALCRLLDMQSPELAIVFVRTKRRADEVTEALKKRAYSAEGLHGDLSQQKRDSVIRQF 293
>gi|375308018|ref|ZP_09773305.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375080349|gb|EHS58570.1| dead/deah box helicase domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 526
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 83/354 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E L P ++++I L F+E TPIQ IP A QGKD+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAKSIPIAL-QGKDMIGQAQTGTGKTAAFGIPLIS 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ EK +RALI+ PTRELA+QV + ++ +++ +R +
Sbjct: 63 KIARNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K +H S+ KQ V A +E+++IE E
Sbjct: 196 FLKDPEHVSVIPKQ------------------------------VSAPLIEQAYIEVPER 225
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L ++ + IVF + + ++ L+ G LH + Q R
Sbjct: 226 QKFEALSRLIDMESPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQR 279
>gi|193683600|ref|XP_001951837.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Acyrthosiphon pisum]
Length = 450
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 163/351 (46%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L + +L ++ L++K PT IQK IP A QGKD+IG AETGSGKT AF +PI+
Sbjct: 20 TFKDLGVTDVLCETCETLKWKTPTKIQKEAIPVAL-QGKDIIGLAETGSGKTGAFAIPIL 78
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LLE P+ + ALI+TPTRELA Q+++ ++ + I V+
Sbjct: 79 QALLEN-------------------PQRYF-ALILTPTRELAFQISEQIEALGSSIGVKC 118
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q +L +P +++ TPGRL + + + L L V+DEADR++
Sbjct: 119 AVIVGGMDMMAQSLMLAKKPHIIIATPGRLVDHLENTKGF--SLRNLKVLVMDEADRILN 176
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P ++R+T +FSAT+ +K
Sbjct: 177 MDFEEEVDKILKVIP------------------------RERRTFLFSATMTKKV---QK 209
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L SL V +T+ + L++ +I + KD
Sbjct: 210 LHRASLVDPVRVEVSTKFQTVEQ----------------------LQQYYIFIPVKYKDV 247
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL +IL+ +VF + ++ LL+ LG+D LH QM Q RL
Sbjct: 248 YLVHILNEMAGNSFMVFMATCNGTVRVALLLRNLGLDAIPLHGQMTQNKRL 298
>gi|189208750|ref|XP_001940708.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976801|gb|EDU43427.1| ATP-dependent RNA helicase DRS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 805
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 157/358 (43%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F EPTPIQ +P A QGKDV+G AETGSGKT AF +PI+
Sbjct: 276 SFQAMSLSRPILRGLASVGFTEPTPIQNKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 334
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R I PTRELA+Q + +A ++
Sbjct: 335 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 375
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ GG ST QE +LK RP+VV+ TPGR + M VE L VLDEADRM
Sbjct: 376 TFALMAGGFSTRDQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 433
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E G +L I+ +P K RQT++FSAT+ S D
Sbjct: 434 LEEGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVD-- 467
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFI---ECK 469
KL R GM V + VD V L + F+ + K
Sbjct: 468 -KLI---------------------RIGMDKPVRLMVDAKKHTVAG--LTQEFVRLRQGK 503
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + AYL YI + IVF + + + G+ LH M Q R++
Sbjct: 504 EDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQ 561
>gi|115492615|ref|XP_001210935.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
gi|121742543|sp|Q0CZN5.1|DRS1_ASPTN RecName: Full=ATP-dependent RNA helicase drs1
gi|114197795|gb|EAU39495.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
Length = 821
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 158/355 (44%), Gaps = 72/355 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ E L +++ + + F PTPIQ+ IP A GKD++G+A TGSGKT AF +PI+
Sbjct: 305 SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GKDIVGSAVTGSGKTAAFVVPIL 363
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RLL K R I+ PTRELA+Q + +A ++
Sbjct: 364 ERLLFRPRKVPTS-----------------RVAILMPTRELAVQCYNVATKLATYTDITF 406
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM+E
Sbjct: 407 CQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRMLE 464
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+G EL I+ +P K RQT++FSAT+ + D +
Sbjct: 465 DGFADELNEILTTIP------------------------KSRQTMLFSATMTDTVDKLIR 500
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KEED 472
+ GLN R +VD L L + F+ +E+
Sbjct: 501 V------------GLN-----------RPVRLMVDSKKNTSLT--LVQEFVRLRPGREDK 535
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ YL Y+ GR IVF + + +LG+ LH M Q R+K
Sbjct: 536 RLGYLLYLCKEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQEQRIK 590
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 166/374 (44%), Gaps = 77/374 (20%)
Query: 160 AEEELVNEAEISTEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
A EE V E + ++ A + L L +++ + + F PTPIQ+ IP A GKDV+G
Sbjct: 280 APEEQVTELKSTSRAPASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVG 338
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTREL 276
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 339 GAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTREL 379
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A+Q + +A ++ +VGG S +QE +LK RP+V++ TPGR + M
Sbjct: 380 AVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 439
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 440 VD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------KS 473
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
RQT++FSAT+ S D +L GLN L +VD V
Sbjct: 474 RQTMLFSATMTSSVDKLIRL------------GLNKPVRL-----------MVDSKKQTV 510
Query: 457 LANKLEESFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
L + F+ +E+ + YL ++ R IVF + + ++G+
Sbjct: 511 --GTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIIFGLMGLKA 568
Query: 514 WTLHAQMQQRARLK 527
LH M Q R+K
Sbjct: 569 AELHGSMSQEQRIK 582
>gi|228474931|ref|ZP_04059660.1| cold-shock DEAD box protein A [Staphylococcus hominis SK119]
gi|314935968|ref|ZP_07843318.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
hominis subsp. hominis C80]
gi|418618997|ref|ZP_13181840.1| DEAD/DEAH box helicase [Staphylococcus hominis VCU122]
gi|228271163|gb|EEK12543.1| cold-shock DEAD box protein A [Staphylococcus hominis SK119]
gi|313655974|gb|EFS19716.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Staphylococcus
hominis subsp. hominis C80]
gi|374825858|gb|EHR89777.1| DEAD/DEAH box helicase [Staphylococcus hominis VCU122]
Length = 503
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 175/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + +K++ + FKEPTPIQK IP +GKD++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVKTLEEMGFKEPTPIQKESIPYTL-EGKDILGQAQTGTGKTGAFGIPLI- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK K ++ALI+ PTRELA+QV + L+ ++G N++VV
Sbjct: 62 --------------------EKVVGKSGVQALILAPTRELAMQVAEQLREFSRGQNIQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+ + + L
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMPKAI---QTL 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+KS Q V +N+ +S+ +++E + KE +K
Sbjct: 193 VQQFMKSPQIVKTMNN--EMSD--------------------PQIDEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|418710177|ref|ZP_13270959.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410769635|gb|EKR44866.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
Length = 516
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E+ + VLDEAD M++
Sbjct: 105 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIV---VLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPAD------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDVLTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ S
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMS 287
>gi|281202503|gb|EFA76705.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1173
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 165/359 (45%), Gaps = 78/359 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L P L+ +L FK P+ IQ IPA G+D++ +A+TG GKT AF LPI+
Sbjct: 662 FEDLGLAPWLLACCKQLGFKAPSNIQYNTIPAIL-SGRDILASAKTGQGKTAAFALPILS 720
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L E+ P G + A+++TPTRELA+Q+ + + + INV
Sbjct: 721 ALSED-------------------PYG-IFAVVLTPTRELAVQIGEQFRALGSAINVNCC 760
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
++GG+ +Q +L RP ++V TPGRL ++ G K + L F VLDEADRM+
Sbjct: 761 VVIGGIDNVQQSLILDKRPHIIVATPGRLAAHLNNGMK--LALQFCRFLVLDEADRMLGP 818
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+Q I++ LP K QTL++SAT+ S KKL
Sbjct: 819 DFELEVQKIVEHLP------------------------PKIQTLLYSATMTNS---NKKL 851
Query: 417 KHGSLKSK---QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+ +K+ + N +++ETLS+ ++ + K
Sbjct: 852 ESIPIKNPYIFEDNNKYDTVETLSQY-------------------------YVFMPAQAK 886
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
D +L Y+L H IVF + + + +L L I +LH+ + Q+ RL Q
Sbjct: 887 DCHLVYLLKKHDSSSVIVFINNCRTVEAVKGMLNKLDIKSVSLHSFLSQKDRLNALKQF 945
>gi|296824198|ref|XP_002850600.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
gi|238838154|gb|EEQ27816.1| ATP-dependent rRNA helicase RRP3 [Arthroderma otae CBS 113480]
Length = 474
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 162/334 (48%), Gaps = 71/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L++K PTPIQ IP A QG+D++G AETGSGKT AF LPI+Q L+E+
Sbjct: 67 LRYKAPTPIQAESIPLAL-QGRDLVGLAETGSGKTAAFALPILQALMEK----------- 114
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P+ + L++ PTRELA+Q+++ + + I+VR IVGGM Q L
Sbjct: 115 --------PQPYF-GLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMDMISQSISLG 165
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L L + V+DEADR+++ L I+ +LP
Sbjct: 166 KKPHIIVATPGRLLDHLENTKG--FSLRNLKYLVMDEADRLLDLDFGPVLDKILKVLP-- 221
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSAT++ +
Sbjct: 222 ----------------------RERRTYLFSATLS-----------------------SK 236
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA + + + +N + L +S+I + KD YL +IL+ TI+F
Sbjct: 237 VESL-QRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDVYLVHILNEFPGQSTIIF 295
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 296 TRTVNETQRLAILLRALGFGAIPLHGQLSQSARL 329
>gi|154284444|ref|XP_001543017.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
gi|160358658|sp|A6QRQ7.1|RRP3_AJECN RecName: Full=ATP-dependent rRNA helicase RRP3
gi|150406658|gb|EDN02199.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus NAm1]
Length = 485
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 179/385 (46%), Gaps = 74/385 (19%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+E + +N DD ++ E ++ F +L + L ++ L +K PTPIQ IP
Sbjct: 35 DEQLTAANEQDDESPQVQREEAVTKSF---KDLGIIDSLCEACEALGYKSPTPIQAESIP 91
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
A QG+D+IG AETGSGKT AF LPI+Q L+ + + L
Sbjct: 92 LAL-QGRDLIGLAETGSGKTAAFALPILQALMNKPQS--------------------LFG 130
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+ PTRELA Q+++ + + I+VR IVGGM Q L +P ++V TPGRL +
Sbjct: 131 LILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLD 190
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ + L +L + V+DEADR+++ L I+ +LP
Sbjct: 191 HLENTKG--FSLRSLKYLVMDEADRLLDLDFGPILDKILKVLP----------------- 231
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
++R+T +FSAT++ + +E+L +RA + +
Sbjct: 232 -------RERRTYLFSATMS-----------------------SKVESL-QRASLSNPLR 260
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
+ +N L +S++ + KD YL Y+L+ + IVF ++ + ++ LL+
Sbjct: 261 VSISSNKYQTVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLR 320
Query: 508 ILGIDVWTLHAQMQQRARLKLFSQM 532
LG LH Q+ Q +RL S+
Sbjct: 321 ALGFGSIPLHGQLSQSSRLGALSKF 345
>gi|433653854|ref|YP_007297562.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292043|gb|AGB17865.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 514
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 177/350 (50%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L+ ++K+I + F+EP+ IQ IP +G DVIG AETG+GKTLA+G PI+
Sbjct: 3 FKELNLNEKILKAIDDMGFEEPSKIQSEVIPVLL-EGSDVIGQAETGTGKTLAYGAPIIN 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ G + LI+TPTRELA+Q+ D L + K VR++
Sbjct: 62 SF--------------------GSNDGKVFCLILTPTRELAIQINDELARIGKYSKVRLL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG+ ++Q + +K ++VVGTPGR+ +L+ ++++++L ++ + V+DEAD M++
Sbjct: 102 PVYGGVQIDRQIKAIKRGVDIVVGTPGRVLDLI---KRNVLDLKSVKYLVIDEADEMLDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II N +N ++RQT++FSAT+
Sbjct: 159 GFIDDIKEII------NHTN------------------EERQTMMFSATMP--------- 185
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I++L+++ M+++ + + + + ++ + E K +++
Sbjct: 186 --------------DEIKSLAKKY-MKSDAKFISIVKKTMTVSTVQHFYYEVKNQERFES 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V TI+FC + + ++ ++ G +V +H M Q R+
Sbjct: 231 LCKILDVDEPSSTIIFCKTKKEVDELTENMQSRGYNVEGMHGDMSQNQRI 280
>gi|312084924|ref|XP_003144474.1| DEAD/DEAH box helicase [Loa loa]
gi|307760364|gb|EFO19598.1| DEAD/DEAH box helicase [Loa loa]
Length = 783
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 170/352 (48%), Gaps = 76/352 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + L L K I + F++PTPIQ+ IP GKD++ + TGSGKT AF +PI+Q
Sbjct: 33 WQAIGLDHTLFKGIQKKGFRQPTPIQRKAIPLII-DGKDIVAMSRTGSGKTAAFVIPILQ 91
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L K+ + KG +RALII PTRELA+Q +K + + +R
Sbjct: 92 KL--------KVRDMKG-----------IRALIIEPTRELAIQTFIVVKELGRFTGLRCA 132
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG E+Q + + +P++VV TPGRL ++ + L + V DEADR+ E
Sbjct: 133 VLVGGDRIEEQFQAVHEKPDIVVATPGRLLHVIVEMD---FRLSAVQIIVFDEADRLFEM 189
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +L ++ +P + RQTL+FSAT+
Sbjct: 190 GFAEQLHEVLKRIP------------------------ENRQTLLFSATLP--------- 216
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIECKEEDKDA 475
NSI S +AG+ V + +DL +++KL F+ C+ +DK A
Sbjct: 217 --------------NSIIAFS-KAGLSDPVLVRLDLAEK--ISDKLSMVFLYCRSDDKLA 259
Query: 476 YLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++ V G +T+VFC ++ + +++++ + GID L++Q+ AR
Sbjct: 260 AFIHLAREVVAGNEQTVVFCATMKHVEYLAAVAEKAGIDCVVLYSQLDCVAR 311
>gi|390456495|ref|ZP_10242023.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus peoriae
KCTC 3763]
Length = 526
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 170/354 (48%), Gaps = 83/354 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E L P ++++I L F+E TPIQ IP A QGKD+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQAISIPIAL-QGKDMIGQAQTGTGKTAAFGIPLIS 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EK +RALI+ PTRELA+QV + ++ +++ +R +
Sbjct: 63 KISKNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K +H S+ KQ V A +E+++IE E
Sbjct: 196 FLKDPEHVSVIPKQ------------------------------VSAPLIEQAYIEVPER 225
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L ++ + IVF + + ++ L+ G LH + Q R
Sbjct: 226 QKFEALSRLIDMESPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQR 279
>gi|169598332|ref|XP_001792589.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
gi|118595361|sp|Q0V1Z7.1|DRS1_PHANO RecName: Full=ATP-dependent RNA helicase DRS1
gi|111069059|gb|EAT90179.1| hypothetical protein SNOG_01967 [Phaeosphaeria nodorum SN15]
Length = 808
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 158/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+++ + L + K + + F EPTPIQ IP A QGKDV+G AETGSGKT AF +PI+
Sbjct: 286 SFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAM-QGKDVVGGAETGSGKTAAFLIPIL 344
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R I PTRELA+Q + +A ++
Sbjct: 345 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 385
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ GG S+ +QE +LK RP+VV+ TPGR + M VE L VLDEADRM
Sbjct: 386 TFALLAGGFSSREQEVMLKTRPDVVIATPGRFIDHMHNTAAFQVE--HLEILVLDEADRM 443
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E G +L I+ +P K RQT++FSAT+ + D
Sbjct: 444 LEEGFETQLNEILTTIP------------------------KSRQTMLFSATMTSTVD-- 477
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFI---ECK 469
KL R GM V + VD V L + FI + K
Sbjct: 478 -KLI---------------------RIGMDKPVRLMVDAKKHTV--KGLTQEFIRLRQGK 513
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + AYL YI R I+F + + + G+ LH M Q R++
Sbjct: 514 EDKRLAYLMYICEKIYTERVIIFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQ 571
>gi|198458635|ref|XP_001361114.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
gi|198136412|gb|EAL25690.2| GA11795 [Drosophila pseudoobscura pseudoobscura]
Length = 527
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 170/368 (46%), Gaps = 83/368 (22%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + + L L P ++K + +L K TPIQ+ CIPA GKD IGAA+TGSGKT AF L
Sbjct: 5 ETNPFQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAIL-SGKDCIGAAQTGSGKTFAFAL 63
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI++RL EE P H AL++TPT ELA Q+++ + +
Sbjct: 64 PILERLSEE-------------------PVSHF-ALVLTPTHELAYQISEQFLVAGQPMG 103
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
VRV + GG + + L RP +VV PGRL + ++G + L + V+DEADR
Sbjct: 104 VRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDT--FSFDNLKYLVVDEADR 161
Query: 353 MIENGHFRELQSIID-MLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
M+ NG F E +II+ LP T RQ L FSAT+ D
Sbjct: 162 ML-NGDFDESLAIIERCLPST------------------------RQNLFFSATM---KD 193
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERA---GMRANVAIVDLTNMCVLANKLEESFIEC 468
F K+ +SI +S+ +NVA VD L++ ++ C
Sbjct: 194 FMKE---------------SSIFPISKDCIEWSQDSNVATVD---------TLDQRYLLC 229
Query: 469 KEEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
+ D+D L L + + ++F + + +S LK + ID LH M+Q+
Sbjct: 230 ADYDRDMVLIESLRKYREENENSNVMIFTNTKKYCQLLSMTLKSMDIDNVCLHGFMRQKE 289
Query: 525 RLKLFSQM 532
R+ S+
Sbjct: 290 RVAALSRF 297
>gi|193214029|ref|YP_001995228.1| DEAD/DEAH box helicase [Chloroherpeton thalassium ATCC 35110]
gi|193087506|gb|ACF12781.1| DEAD/DEAH box helicase domain protein [Chloroherpeton thalassium
ATCC 35110]
Length = 431
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 176/358 (49%), Gaps = 72/358 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ + L+P +++++ L ++ PT IQ A IP A GKD++ A+TG+GKT AF LPI+
Sbjct: 6 FESISLNPSILRALKELGYETPTAIQAAAIPEAI-LGKDILATAQTGTGKTAAFALPILH 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RL E R + AP RALI+TPTRELALQ+ ++++ A+ + +R
Sbjct: 65 RLGENRSYDIR------------AP----RALILTPTRELALQIDNNIRLYARYLRLRTG 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I+GG+ Q ++L+ P+++V TPGRL +L G + L + FVLDEADRM++
Sbjct: 109 VIMGGVPAHPQIKMLRRNPDILVATPGRLIDLFDQG---FIGLDQIQTFVLDEADRMLDM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I SLQ + QTL+FSAT++
Sbjct: 166 GFIDDIRRI------------------------ESLQPRDHQTLLFSATLS--------- 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
IE L+ R +R V I ++ + +A+ + + + ++ +K
Sbjct: 193 --------------PEIEALASRM-LREPVRI-EVAPVSSVADNITQKVLFVEQNNKREL 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR---LKLFSQ 531
L+ + + R +VF + H++ L LGI +H+ QRAR L LF +
Sbjct: 237 LHNLFKENDIKRALVFTRTKQRANHVAEQLIRLGISADAIHSSKSQRARQRALMLFDR 294
>gi|195032613|ref|XP_001988529.1| GH11216 [Drosophila grimshawi]
gi|193904529|gb|EDW03396.1| GH11216 [Drosophila grimshawi]
Length = 864
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 182/358 (50%), Gaps = 43/358 (12%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +WNE P +++ I + +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 431 IPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 489
Query: 230 FGLPIMQRLLEEREKAAKMLE-DKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVA 288
F +P++ ++ K ++ + D+G A+I+ PTRELA Q+ +
Sbjct: 490 FLIPLLS-WIQSLPKIERLEDVDQGP-----------YAIIMAPTRELAQQIEEETIKFG 537
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
+ + +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLD
Sbjct: 538 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLD 594
Query: 349 EADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
EADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 595 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDEKKLMENFYTKKKYRQTVMFTATMP 654
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
+ + +L L+ +V + S+ +ER TN V
Sbjct: 655 PAVE---RLARTYLRRPATVY-IGSVGKPTER------------TNQIVYM--------- 689
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E DK L ILS + I+F ++ L+ LG + TLH Q R
Sbjct: 690 MGENDKRKKLMQILSAGIEPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 747
>gi|21593647|gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana]
Length = 456
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 167/350 (47%), Gaps = 60/350 (17%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L+K+ RL +K P+ IQ +P A +GKDVIG A+TGSGKT AF +PI+Q
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFAL-EGKDVIGLAQTGSGKTGAFAIPILQ 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE + D E + P A +++PTRELA+Q+ + + + I++R
Sbjct: 70 ALLE-------YVYD-SEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG+ +Q L RP V+V TPGRLW+ MS + L +L + VLDEADR++
Sbjct: 122 VLFGGIDRMQQTIALGKRPHVIVATPGRLWDHMS--DTKGFSLKSLKYLVLDEADRLLNE 179
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ L I++ +P ++R+T +FSAT+ +KL
Sbjct: 180 DFEKSLNQILEEIP------------------------RERKTFLFSATMTKKV---RKL 212
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ L++ + + T+ + L++ + + KD Y
Sbjct: 213 QRACLRNPVKIEAASKYSTV----------------------DTLKQQYRFVAAKYKDCY 250
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YILS + +++F + R ++ +L+ LG + QM Q RL
Sbjct: 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRL 300
>gi|158298749|ref|XP_318913.4| AGAP009808-PA [Anopheles gambiae str. PEST]
gi|157014035|gb|EAA14161.4| AGAP009808-PA [Anopheles gambiae str. PEST]
Length = 510
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 188/405 (46%), Gaps = 85/405 (20%)
Query: 147 VEESV-AVSNGPD-----------DAEEELVNEAEISTEFD-AWNELRLHPLLMKSIYRL 193
VEE+ A +NG D D +EE +AE T+ +W +L L L + L
Sbjct: 15 VEEAARAAANGDDSSDQEENGSGTDVDEEQDGQAENGTDVSKSWEDLGLIDTLCTACRGL 74
Query: 194 QFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKG 253
++K P+ IQ+ IP A QGKD+IG AETGSGKT AF LPI+Q LL+
Sbjct: 75 KWKAPSKIQREAIPLAL-QGKDIIGLAETGSGKTGAFALPILQALLDN------------ 121
Query: 254 EEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKA 313
P+ + A+++TPTRELA Q+++ + + I V+ IVGGM Q L
Sbjct: 122 -------PQRYF-AVVLTPTRELAYQISEQFEALGATIGVKCCVIVGGMDLVTQAIQLAR 173
Query: 314 RPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 373
+P +++ TPGRL + + + L + + V+DEADR++ E+ I+ ++P
Sbjct: 174 KPHIIIATPGRLVDHLENTKG--FSLKAIRYLVMDEADRILNMDFEEEVNKILKVMP--- 228
Query: 374 GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI 433
++R+T +FSAT+ KK+K
Sbjct: 229 ---------------------RERRTFLFSATMT------KKVKK--------------- 246
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFC 493
ERA +R V V++++ KL + ++ K+ YL ++L+ ++FC
Sbjct: 247 ---LERASLRDPVK-VEVSSKYQTVEKLLQYYLFIPARYKNVYLVHVLNELAGNSFMIFC 302
Query: 494 TSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIRK 538
++ + +L+ LG+ LH QM Q RL ++ + R+
Sbjct: 303 STCNNTVRTALMLRALGLAAVPLHGQMTQNKRLAALNKFKSQARQ 347
>gi|392988049|ref|YP_006486642.1| DEAD/DEAH box helicase [Enterococcus hirae ATCC 9790]
gi|392335469|gb|AFM69751.1| DEAD-box ATP dependent DNA helicase [Enterococcus hirae ATCC 9790]
Length = 503
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-SGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDTNRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKRVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++++II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIENIISKVP------------------------EERQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKSPTHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|398340413|ref|ZP_10525116.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Bim str.
1051]
gi|418679063|ref|ZP_13240328.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418685350|ref|ZP_13246526.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|418740862|ref|ZP_13297238.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421089722|ref|ZP_15550526.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 200802841]
gi|421131655|ref|ZP_15591835.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 2008720114]
gi|400320478|gb|EJO68347.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410001546|gb|EKO52142.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 200802841]
gi|410357029|gb|EKP04314.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 2008720114]
gi|410739958|gb|EKQ84680.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|410751457|gb|EKR08434.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 513
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE LE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLE--------LESK-----------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E+ + VLDEAD M++
Sbjct: 105 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIV---VLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEYILKDTP------------------------SDRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALTRLIEYRNVKLALVFCNTKVQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|456971409|gb|EMG12025.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 523
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E+ + VLDEAD M++
Sbjct: 105 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIV---VLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDVLTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ S
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMS 287
>gi|152060562|sp|A4RGD1.1|RRP3_MAGO7 RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 538
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 178/381 (46%), Gaps = 79/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
TVEE+ + + EL ++ E T+ ++ +L + L ++ L+FK+PTPIQ+
Sbjct: 89 TVEEAT------KEGQTELPSKEETPTK--SFRDLGIVEPLCEACEALKFKKPTPIQEQA 140
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A QG+DVIG AETGSGKT AF LPI+Q LLE+ + L
Sbjct: 141 IPLAL-QGRDVIGIAETGSGKTAAFALPILQSLLEKPQP--------------------L 179
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
L++ PTRELA Q+ + + I++R +VGG+ Q L +P +VV TPGRL
Sbjct: 180 FGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTALGKKPHIVVATPGRL 239
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L +L F V+DEADR+++ L I+ LP
Sbjct: 240 LDHLEKTKG--FSLRSLKFLVMDEADRLLDLDFGPILDKILKFLP--------------- 282
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + L+ SL+ V+ +S E
Sbjct: 283 ---------RERRTFLFSATMSSKVE---SLQRASLRDPLKVSVSSSQEK---------- 320
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
T ++ N L FI K KD YL Y+ + TIVF ++ + +S L
Sbjct: 321 ------TVSTLIQNPL---FIPHKH--KDVYLIYLANEFAGKTTIVFTRTVNEAQRVSIL 369
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ L LH Q+ Q RL
Sbjct: 370 LRTLSFGAIPLHGQLSQSMRL 390
>gi|417767783|ref|ZP_12415719.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|417771330|ref|ZP_12419225.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418683423|ref|ZP_13244628.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418692066|ref|ZP_13253147.1| DEAD/DEAH box helicase [Leptospira interrogans str. FPW2026]
gi|418704680|ref|ZP_13265548.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418715605|ref|ZP_13275726.1| DEAD/DEAH box helicase [Leptospira interrogans str. UI 08452]
gi|418728985|ref|ZP_13287554.1| DEAD/DEAH box helicase [Leptospira interrogans str. UI 12758]
gi|421117665|ref|ZP_15578023.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|421125072|ref|ZP_15585328.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135493|ref|ZP_15595614.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400324996|gb|EJO77280.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|400349801|gb|EJP02089.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400358129|gb|EJP14245.1| DEAD/DEAH box helicase [Leptospira interrogans str. FPW2026]
gi|409946527|gb|EKN96536.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410010782|gb|EKO68915.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Canicola
str. Fiocruz LV133]
gi|410020157|gb|EKO86961.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410437368|gb|EKP86468.1| DEAD/DEAH box helicase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410765628|gb|EKR36327.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410776388|gb|EKR56367.1| DEAD/DEAH box helicase [Leptospira interrogans str. UI 12758]
gi|410788506|gb|EKR82224.1| DEAD/DEAH box helicase [Leptospira interrogans str. UI 08452]
gi|455667070|gb|EMF32431.1| DEAD/DEAH box helicase [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 516
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E+ + +LDEAD M++
Sbjct: 105 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIV---ILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDVLTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ S
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMS 287
>gi|327307140|ref|XP_003238261.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
gi|326458517|gb|EGD83970.1| ATP-dependent rRNA helicase RRP3 [Trichophyton rubrum CBS 118892]
Length = 474
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 71/341 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L + L +K PTPIQ IP A QG+D++G AETGSGKT AF LPI+Q L+E+
Sbjct: 60 LCDACTSLGYKTPTPIQAESIPLAL-QGRDLVGLAETGSGKTAAFALPILQALMEK---- 114
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
P+ + L++ PTRELA+Q+++ + + I+VR IVGGM
Sbjct: 115 ---------------PQPYF-GLVLAPTRELAVQISEAFEALGSLISVRCAVIVGGMDMI 158
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L +P ++V TPGRL + + + L L + V+DEADR+++ L I
Sbjct: 159 SQSISLGKKPHIIVATPGRLLDHLENTKGF--SLRNLKYLVMDEADRLLDLDFGPVLDKI 216
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +LP ++R+T +FSAT++
Sbjct: 217 LKVLP------------------------RERRTYLFSATLS------------------ 234
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
+ +E+L +RA + + + +N + L +S+I + KD YL +IL+
Sbjct: 235 -----SKVESL-QRASLSNPLRVSISSNKYQTVSTLLQSYIFIPHKYKDIYLVHILNEFP 288
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
TI+F ++ + +S LL+ LG LH Q+ Q ARL
Sbjct: 289 GQTTIIFTRTVNETQRLSILLRALGFGAIPLHGQLSQSARL 329
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 162/351 (46%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ EL + L ++ L +K PT IQ IP A +GKD+IG AETGSGKT AF +PI+
Sbjct: 83 SFKELGVMDSLCEACENLGYKNPTSIQVESIPVAL-EGKDLIGLAETGSGKTAAFAIPIL 141
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L + P G L A I+ PTRELA Q+++ + + GI VR
Sbjct: 142 QALWDN-------------------PTG-LFACILAPTRELAFQISEQFEALGGGIGVRS 181
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q L +P ++V TPGRL + + + L L + V+DEADR+++
Sbjct: 182 AVIVGGMDMMTQSVALGKKPHILVATPGRLLDHLENTKGF--SLRNLKYLVMDEADRLLD 239
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
L I+ ++P T R+T +FSAT+ + K
Sbjct: 240 MDFGPILDKILKVIPQT------------------------RRTYLFSATMTSKVE---K 272
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SL S ++ + T+S L + F+ + KD
Sbjct: 273 LQRASLSSPVRISVGSKYSTVS----------------------TLIQKFLFIPFKHKDT 310
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+++ TI+FC ++ ++ LL+ LG + L+ QM Q ARL
Sbjct: 311 YLVYLMNEFAGQTTIIFCRTVQETSRLAILLRHLGFNAVPLNGQMSQSARL 361
>gi|195388290|ref|XP_002052813.1| GJ17767 [Drosophila virilis]
gi|194149270|gb|EDW64968.1| GJ17767 [Drosophila virilis]
Length = 835
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 181/357 (50%), Gaps = 41/357 (11%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +WNE P +++ I + +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 402 IPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 460
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + + + LED + P A+I+ PTRELA Q+ + +
Sbjct: 461 FLIPLLSWI--QSLPKIERLEDVDQ-----GPY----AIIMAPTRELAQQIEEETIKFGQ 509
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 510 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 566
Query: 350 ADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 567 ADRMIDMGFEPDVQKILEYMPVTNLKPDSEEAEDEKKLMENFYTKKKYRQTVMFTATMPP 626
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + +L L+ +V + S+ +ER TN V
Sbjct: 627 AVE---RLARSYLRRPATVY-IGSVGKPTER------------TNQIVYM---------M 661
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E DK L ILS + I+F ++ L+ LG + TLH Q R
Sbjct: 662 GENDKRKKLMQILSAGIEPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 718
>gi|68473179|ref|XP_719395.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|74656492|sp|Q5ACK7.1|DRS1_CANAL RecName: Full=ATP-dependent RNA helicase DRS1
gi|46441210|gb|EAL00509.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|238880416|gb|EEQ44054.1| hypothetical protein CAWG_02313 [Candida albicans WO-1]
Length = 613
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L+L ++K I L+F +PTPIQ A IP A GKD++ A+TGSGKT A+ +PI+
Sbjct: 131 SFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALL-GKDIVAGAQTGSGKTGAYMIPII 189
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVR 294
+RLL Y P + +I+TPTRELALQV + K ++ + N+
Sbjct: 190 ERLL-------------------YKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLN 230
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ VGG++ +QE LK RP++V+ TPGRL + + V+ + V+DEADRM+
Sbjct: 231 IGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQ--DIQVLVIDEADRML 288
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E G EL I+ ++P + KRQTL+FSAT+
Sbjct: 289 EEGFQDELTEILSLIP-----------------------KHKRQTLLFSATMN------- 318
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED-- 472
I+ L + + + ++D A+KL + F+ ++ D
Sbjct: 319 ----------------TRIQDLIQLSLQKPVRIMIDPPKSV--ASKLLQQFVRIRKRDQL 360
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
K A LY +L R +VF + +L +LG+ V LH + Q RL+
Sbjct: 361 KPALLYQLLK-GVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQ 414
>gi|440475921|gb|ELQ44569.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae Y34]
Length = 906
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 179/381 (46%), Gaps = 79/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
TVEE+ + + EL ++ E T+ ++ +L + L ++ L+FK+PTPIQ+
Sbjct: 89 TVEEAT------KEGQTELPSKEETPTK--SFRDLGIVEPLCEACEALKFKKPTPIQEQA 140
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A QG+DVIG AETGSGKT AF LPI+Q LLE+ + L
Sbjct: 141 IPLAL-QGRDVIGIAETGSGKTAAFALPILQSLLEKPQP--------------------L 179
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
L++ PTRELA Q+ + + I++R +VGG+ Q L +P +VV TPGRL
Sbjct: 180 FGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSIALGKKPHIVVATPGRL 239
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L +L F V+DEADR+++ L I+ LP
Sbjct: 240 LDHLEKTKG--FSLRSLKFLVMDEADRLLDLDFGPILDKILKFLP--------------- 282
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + L+ SL+ V S+ + E+
Sbjct: 283 ---------RERRTFLFSATMSSKVE---SLQRASLRDPLKV----SVSSSQEK------ 320
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
T ++ N L FI K KD YL Y+ + TIVF ++ + +S L
Sbjct: 321 ------TVSTLIQNPL---FIPHKH--KDVYLIYLANEFAGKTTIVFTRTVNEAQRVSIL 369
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ L LH Q+ Q RL
Sbjct: 370 LRTLSFGAIPLHGQLSQSMRL 390
>gi|118372814|ref|XP_001019601.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89301368|gb|EAR99356.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 1093
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 117/189 (61%), Gaps = 9/189 (4%)
Query: 182 LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE 241
+HP +++S+ F PT IQ A + D + A++TGSGKTL+FG+PI+ +L +
Sbjct: 15 IHPQVLQSLKDNNFNNPTEIQ-AYVLNTYRNYNDFLIASQTGSGKTLSFGIPIVSEILYD 73
Query: 242 REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--NVRVVPIV 299
+ A + ++ EKY +R LII PTREL LQ+ HL +++ +R+ IV
Sbjct: 74 KSGAFAEKKKDQKKKEKY-----IRCLIIAPTRELVLQIEKHLNQISQNSKDQIRIGSIV 128
Query: 300 GGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-LHTLSFFVLDEADRMIENGH 358
GG+S EKQ R+L P++++ TPGRLW+++ E +E L+ L + VLDEADRM+E GH
Sbjct: 129 GGISKEKQRRILSYVPDILIATPGRLWDMIDNYEHECLEKLYMLDYLVLDEADRMVELGH 188
Query: 359 FRELQSIID 367
F EL I++
Sbjct: 189 FDELDKILE 197
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%)
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E L + ++DLT ++ L+E C EEDK YLY+ L I+F
Sbjct: 490 MEALMNKVKFSGKYKVIDLTQTMLIPKNLKECKTVCVEEDKVLYLYHYLQQRPTENAIIF 549
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
SI+ + I LL+ILG+ V +H++MQQR RLK Q
Sbjct: 550 TNSISYAKKIVHLLEILGMKVLCMHSEMQQRQRLKKLDQF 589
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Anolis carolinensis]
Length = 445
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 171/368 (46%), Gaps = 76/368 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
+ E+E VN AE + F EL + +L ++ +L +K PT IQ IP A QG+D+IG
Sbjct: 4 EMEQEEVN-AEAAKSF---KELGVTEVLCEACDQLGWKTPTKIQVESIPLAL-QGRDIIG 58
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+Q LLE ++ AL++TPTRELA
Sbjct: 59 LAETGSGKTGAFALPILQALLETPQR--------------------FFALVLTPTRELAF 98
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGG+ Q L +P V++ TPGRL + + +
Sbjct: 99 QISEQFEALGSSIGVQTAVIVGGIDMMAQSLALAKKPHVIIATPGRLIDHLENTKGF--N 156
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L + V+DEADR++ E+ I+ ++P + R+
Sbjct: 157 LRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRK 192
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T +FSAT+ +KL+ +LK + +T+
Sbjct: 193 TFLFSATMTKKV---QKLQRAALKDPVKCAVSSKYQTV---------------------- 227
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ ++ + KD+YL YIL+ ++FC++ + + LL+ LG LH
Sbjct: 228 EKLQQYYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 287
Query: 519 QMQQRARL 526
QM Q RL
Sbjct: 288 QMNQNKRL 295
>gi|424869804|ref|ZP_18293485.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
gi|402935190|gb|EJX54460.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
R497]
Length = 501
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQSETIPLAL-AGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKNPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|378728301|gb|EHY54760.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 813
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 157/359 (43%), Gaps = 82/359 (22%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L ++K++ L F PTPIQ IP A QG DV+G+A TGSGKT AF LPI+
Sbjct: 287 SFQQFSLSRPILKALAALSFTAPTPIQARAIPVAL-QGLDVVGSAVTGSGKTAAFLLPIL 345
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R I+ PTRELA+Q + +A+ ++
Sbjct: 346 ERLL-------------------YRPRKVPTTRVAILMPTRELAVQCYNVATALARFTDI 386
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG +QE +LK RP+VV+ TPGR + M +VE + VLDEADRM
Sbjct: 387 TFAQVVGGFPLREQEAILKKRPDVVIATPGRFIDHMRNSASFVVE--NIEILVLDEADRM 444
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD-- 411
+E G EL I+ +P K RQT++FSAT+ S D
Sbjct: 445 LETGFEDELNEILKTIP------------------------KGRQTMLFSATMTDSVDKL 480
Query: 412 ----FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
+ ++ K +V+GL + E +R + L +CVL F E
Sbjct: 481 VRVGMNRPVRLSVDAKKSTVSGL-----VQEFVRLRPGRENLRLATLCVLCKNF---FTE 532
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
RTI+F + + +LG+ LH M Q R+
Sbjct: 533 --------------------RTIIFFRQKKEAHRVRIVFGLLGLKAGELHGSMSQEQRI 571
>gi|15219185|ref|NP_173078.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
gi|75336890|sp|Q9SA27.1|RH36_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 36
gi|4966350|gb|AAD34681.1|AC006341_9 Similar to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family [Arabidopsis thaliana]
gi|332191310|gb|AEE29431.1| DEAD-box ATP-dependent RNA helicase 36 [Arabidopsis thaliana]
Length = 491
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 164/345 (47%), Gaps = 77/345 (22%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L ++PTP+Q C+P G+DV+G A+TGSGKT AF LPI+ RL E+
Sbjct: 76 LGMRKPTPVQTHCVPKIL-AGRDVLGLAQTGSGKTAAFALPILHRLAED----------- 123
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P G + AL++TPTRELA Q+ + K + +N+R IVGGM Q L
Sbjct: 124 --------PYG-VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLV 174
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+RP +V+ TPGR+ L+ F VLDEADR+++ G EL++I LP
Sbjct: 175 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP-- 232
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS--KQSVNGL 430
K RQTL+FSAT ++++ + L+H S K+ ++ GL
Sbjct: 233 ----------------------KSRQTLLFSAT--MTSNLQALLEHSSNKAYFYEAYEGL 268
Query: 431 NSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH---GQG 487
+++TL+++ FI ++ K+ YL +ILS G
Sbjct: 269 KTVDTLTQQ-------------------------FIFEDKDAKELYLVHILSQMEDKGIR 303
Query: 488 RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++F ++ + +S +L L ++ +H+ Q RL S+
Sbjct: 304 SAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKF 348
>gi|227550862|ref|ZP_03980911.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257887886|ref|ZP_05667539.1| helicase [Enterococcus faecium 1,141,733]
gi|257893315|ref|ZP_05672968.1| helicase [Enterococcus faecium 1,231,408]
gi|293379275|ref|ZP_06625421.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|431036552|ref|ZP_19492322.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|431752972|ref|ZP_19541651.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|431763081|ref|ZP_19551634.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
gi|227179960|gb|EEI60932.1| DEAD box ATP-dependent RNA helicase SrmB [Enterococcus faecium
TX1330]
gi|257823940|gb|EEV50872.1| helicase [Enterococcus faecium 1,141,733]
gi|257829694|gb|EEV56301.1| helicase [Enterococcus faecium 1,231,408]
gi|292642071|gb|EFF60235.1| DEAD/DEAH box helicase [Enterococcus faecium PC4.1]
gi|430563092|gb|ELB02323.1| DEAD/DEAH box helicase [Enterococcus faecium E1590]
gi|430612933|gb|ELB49957.1| DEAD/DEAH box helicase [Enterococcus faecium E2620]
gi|430622775|gb|ELB59485.1| DEAD/DEAH box helicase [Enterococcus faecium E3548]
Length = 503
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKSPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|389642833|ref|XP_003719049.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
gi|351641602|gb|EHA49465.1| ATP-dependent rRNA helicase RRP3 [Magnaporthe oryzae 70-15]
Length = 562
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 178/381 (46%), Gaps = 79/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
TVEE+ + + EL ++ E T+ ++ +L + L ++ L+FK+PTPIQ+
Sbjct: 113 TVEEAT------KEGQTELPSKEETPTK--SFRDLGIVEPLCEACEALKFKKPTPIQEQA 164
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A QG+DVIG AETGSGKT AF LPI+Q LLE+ + L
Sbjct: 165 IPLAL-QGRDVIGIAETGSGKTAAFALPILQSLLEKPQP--------------------L 203
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
L++ PTRELA Q+ + + I++R +VGG+ Q L +P +VV TPGRL
Sbjct: 204 FGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTALGKKPHIVVATPGRL 263
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L +L F V+DEADR+++ L I+ LP
Sbjct: 264 LDHLEKTKG--FSLRSLKFLVMDEADRLLDLDFGPILDKILKFLP--------------- 306
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + L+ SL+ V+ +S E
Sbjct: 307 ---------RERRTFLFSATMSSKVE---SLQRASLRDPLKVSVSSSQEK---------- 344
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
T ++ N L FI K KD YL Y+ + TIVF ++ + +S L
Sbjct: 345 ------TVSTLIQNPL---FIPHKH--KDVYLIYLANEFAGKTTIVFTRTVNEAQRVSIL 393
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ L LH Q+ Q RL
Sbjct: 394 LRTLSFGAIPLHGQLSQSMRL 414
>gi|433447995|ref|ZP_20411254.1| DEAD-box ATP-dependent RNA helicase CshA [Anoxybacillus
flavithermus TNO-09.006]
gi|431999627|gb|ELK20547.1| DEAD-box ATP-dependent RNA helicase CshA [Anoxybacillus
flavithermus TNO-09.006]
Length = 471
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 167/354 (47%), Gaps = 73/354 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ E L P LMK++ ++ F+E TPIQ A IP + Q +DVIG A+TG+GKT AFG+P++
Sbjct: 6 TFKEFGLSPELMKAVSKMGFEEATPIQAATIPLSL-QNRDVIGQAQTGTGKTAAFGIPLI 64
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+++ D +A ++A+++ PTRELA+QV++ L + VRV
Sbjct: 65 EKI------------DMNNDA--------VQAIVVAPTRELAIQVSEELYKIGSTKRVRV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+PI GG E+Q R LK P ++VGTPGR+ + + L +HT+ VLDEAD M+
Sbjct: 105 LPIYGGQDIERQIRALKKHPHIIVGTPGRVLDHIQRRTLRLQNVHTV---VLDEADEMLN 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G ++++I+ +P +RQTL+FSAT+
Sbjct: 162 MGFVEDIEAILSHVP------------------------TERQTLLFSATMP-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
I ++ER + V M V +E+ +IE +E+ K
Sbjct: 190 ---------------EPIRRIAERFMQNPELVRVKAKEMTV--PNIEQYYIEIQEKKKFD 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
L +L + IVF + + ++ L + G +H + Q RL +
Sbjct: 233 TLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYTAEGIHGDLSQAKRLSVL 286
>gi|38566158|gb|AAH62498.1| ddx47-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 401
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 163/346 (47%), Gaps = 72/346 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + +L ++ +L +K+PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q
Sbjct: 20 FRELGVTDVLCETCEQLGWKQPTKIQIEAIPVAL-QGRDIIGLAETGSGKTGAFALPILQ 78
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE ++ L AL++TPTRELA Q+++ + + I V+
Sbjct: 79 TLLESPQR--------------------LYALVLTPTRELAFQISEQFEALGSTIGVKSA 118
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P VV+ TPGRL + + + L L + V+DEADR++
Sbjct: 119 VIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGF--NLRALKYLVMDEADRILNM 176
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P + R+T +FSAT+ +KL
Sbjct: 177 DFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---QKL 209
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK + +T+ KL++ ++ + KD+Y
Sbjct: 210 QRAALKDPVKCAVSSKYQTV----------------------EKLQQFYVFIPSKFKDSY 247
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
L YIL+ ++FC++ + ++ LL+ LG LH QM Q
Sbjct: 248 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQ 293
>gi|242003922|ref|XP_002422909.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212505802|gb|EEB10171.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 458
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 163/351 (46%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L + +L ++ L++K PT IQK IP QG+DVIG AETGSGKT AF LPI+
Sbjct: 23 TFKDLGIVDVLCQTCESLKWKAPTKIQKEAIPLTL-QGRDVIGLAETGSGKTGAFALPIL 81
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LL+ P+ + ALI+TPTRELA Q+++ + + I V+
Sbjct: 82 QALLQN-------------------PQRYF-ALILTPTRELAFQISEQFQALGSKIGVKT 121
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q LL +P V++ TPGRL + + + L L F V+DEADR++
Sbjct: 122 AVIVGGMDMMSQALLLAKKPHVIIATPGRLVDHLENTKGF--NLKALKFLVMDEADRILN 179
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P ++R+TL+FSAT+ +K
Sbjct: 180 MDFEVEVDKILKVIP------------------------RERRTLLFSATMTQKV---QK 212
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SL V + +T+ +KL++ ++ + KD
Sbjct: 213 LQRASLHDPVKVEVSSKYQTV----------------------DKLQQYYLFIPVKFKDV 250
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL I++ ++FC + + LL+ LG LH QM Q RL
Sbjct: 251 YLVSIINEMAGNTFMIFCGTCHNTLRTALLLRQLGFTAIPLHGQMSQNKRL 301
>gi|301610486|ref|XP_002934777.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Xenopus (Silurana) tropicalis]
Length = 402
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 163/346 (47%), Gaps = 72/346 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + +L ++ +L +K+PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q
Sbjct: 21 FRELGVTDVLCETCEQLGWKQPTKIQIEAIPVAL-QGRDIIGLAETGSGKTGAFALPILQ 79
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE ++ L AL++TPTRELA Q+++ + + I V+
Sbjct: 80 TLLESPQR--------------------LYALVLTPTRELAFQISEQFEALGSTIGVKSA 119
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P VV+ TPGRL + + + L L + V+DEADR++
Sbjct: 120 VIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGF--NLRALKYLVMDEADRILNM 177
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P + R+T +FSAT+ +KL
Sbjct: 178 DFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---QKL 210
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK + +T+ KL++ ++ + KD+Y
Sbjct: 211 QRAALKDPVKCAVSSKYQTV----------------------EKLQQFYVFIPSKFKDSY 248
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQ 522
L YIL+ ++FC++ + ++ LL+ LG LH QM Q
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQ 294
>gi|284037338|ref|YP_003387268.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
gi|283816631|gb|ADB38469.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
Length = 485
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 169/357 (47%), Gaps = 68/357 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L ++K++ + PTPIQ+ IP + +D++G A+TG+GKT AF +PI+Q
Sbjct: 3 FSELSLIDPILKALTEEGYTNPTPIQEKAIPILLSR-RDLLGCAQTGTGKTAAFAIPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L EER K+ P+ ++ LI+TPTRELA+Q+ + + +N+R
Sbjct: 62 LLSEERSKSTG------------GPR-RIKTLILTPTRELAIQIAESFTAYGRHLNIRNT 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+S Q LKA +V++ TPGRL +LM+ G + L + FFVLDEADRM++
Sbjct: 109 VIFGGVSQHSQVNTLKAGVDVLIATPGRLLDLMNQG---FISLRDVQFFVLDEADRMLDM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ +I LP RQ+L FSAT+
Sbjct: 166 GFIHDVKKVITKLPT------------------------HRQSLFFSATMPPDV------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K + LN N A V++T + A+ +E++ +EDK
Sbjct: 196 ------AKLADTILN-------------NPAKVEVTPVSSTADTIEQAMYFVGKEDKRKL 236
Query: 477 LYYILSVHGQGRTIVFC-TSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +IL +VF T A + + LLK GI +H Q AR + S
Sbjct: 237 LVHILDDKNIKSALVFARTKHGADKVVKDLLK-AGIGAEAIHGNKSQNARQRALSNF 292
>gi|195154715|ref|XP_002018267.1| GL17616 [Drosophila persimilis]
gi|194114063|gb|EDW36106.1| GL17616 [Drosophila persimilis]
Length = 527
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 170/368 (46%), Gaps = 83/368 (22%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + + L L P ++K + +L K TPIQ+ CIPA GKD IGAA+TGSGKT AF L
Sbjct: 5 EANPFQSLGLRPWMVKQLTKLGLKGATPIQQNCIPAIL-SGKDCIGAAQTGSGKTFAFAL 63
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI++RL EE P H AL++TPT ELA Q+++ + +
Sbjct: 64 PILERLSEE-------------------PVSHF-ALVLTPTHELAYQISEQFLVAGQPMG 103
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
VRV + GG + + L RP +VV PGRL + ++G + L + V+DEADR
Sbjct: 104 VRVCVVSGGTDQMIESQKLMQRPHIVVAMPGRLADHLTGCDT--FSFDNLKYLVVDEADR 161
Query: 353 MIENGHFRELQSIID-MLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
M+ NG F E +II+ LP T RQ L FSAT+ D
Sbjct: 162 ML-NGDFDESLAIIERCLPST------------------------RQNLFFSATM---KD 193
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERA---GMRANVAIVDLTNMCVLANKLEESFIEC 468
F K+ +SI +S+ +NVA VD L++ ++ C
Sbjct: 194 FMKE---------------SSIFPISKDCIEWSQDSNVATVD---------TLDQRYLLC 229
Query: 469 KEEDKDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
+ D+D L L + + ++F + + +S LK + ID LH M+Q+
Sbjct: 230 ADYDRDMVLIESLRKYREENENSNVMIFTNTKKYCQLLSMTLKSMDIDNVCLHGFMRQKE 289
Query: 525 RLKLFSQM 532
R+ S+
Sbjct: 290 RVAALSRF 297
>gi|346472553|gb|AEO36121.1| hypothetical protein [Amblyomma maculatum]
Length = 473
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 72/356 (20%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S E + L + +L ++ +L++K PT IQK IP A QG+DVIG AETGSGKT +F
Sbjct: 28 SEENVTFKSLGVVDVLCEACEQLKWKSPTKIQKEAIPVAL-QGRDVIGLAETGSGKTASF 86
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
LPI+Q LLE ++ L AL++TPTRELA Q+++ + +
Sbjct: 87 ALPILQALLENPQR--------------------LFALVLTPTRELAFQISEQFEALGAS 126
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
I V+ IVGG+ Q LL +P V++ TPGRL + + + L +L + V+DEA
Sbjct: 127 IGVKSAVIVGGIDMMTQALLLAKKPHVIIATPGRLVDHLENTKGF--SLKSLKYLVMDEA 184
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DR++ E+ I+ ++P ++R+T ++SAT+
Sbjct: 185 DRILNMDFEEEVDKILRVIP------------------------RERRTYLYSATMTKKV 220
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
+KL+ SL+ V + +T+ KL + ++
Sbjct: 221 ---QKLQRASLRDPVKVEVSSKYQTV----------------------EKLMQYYLFIPA 255
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ KD YL ++L+ +VFC++ + + + LL+ LG LH QM Q RL
Sbjct: 256 KFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLGFTAIPLHGQMGQAKRL 311
>gi|410963864|ref|XP_003988479.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Felis catus]
Length = 455
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 172/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEAPQPAVQEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P V++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYVFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|225457931|ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
vinifera]
Length = 732
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 168/354 (47%), Gaps = 70/354 (19%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ EL L L+++ L + +PTPIQ ACIP A G+D+ G+A TGSGKT AF LP
Sbjct: 125 NSFLELNLSRPLLRACEALGYTKPTPIQAACIPIAL-TGRDICGSAITGSGKTAAFSLPT 183
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL + PK +R L++TPTRELA+QV ++ +A+ +
Sbjct: 184 LERLL-------------------FRPKRVQAIRVLVLTPTRELAVQVHSMMEKLAQFTD 224
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+S++ QE L++ P+VVV TPGR+ + + V+L L+ +LDEADR
Sbjct: 225 IRCCLIVGGLSSKMQETALRSMPDVVVATPGRMIDHLRNSMS--VDLEDLAVLILDEADR 282
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++E G E++ ++ + P K+RQT++FSAT+ D
Sbjct: 283 LLELGFNAEIRELVRLCP------------------------KRRQTMLFSATMTEEVDE 318
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
KL + TL+E +V + M +E +
Sbjct: 319 LVKLSMTKPMRLAADPSTKRPATLTEE--------VVRIRRM--------------REVN 356
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++A L + S + I+F + A + L + G LH + Q RL
Sbjct: 357 QEAVLLALCSKTFTAKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRL 410
>gi|424762589|ref|ZP_18190093.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecalis
TX1337RF]
gi|431757804|ref|ZP_19546433.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
gi|402424479|gb|EJV56656.1| DEAD-box ATP-dependent RNA helicase CshA [Enterococcus faecium
TX1337RF]
gi|430618309|gb|ELB55156.1| DEAD/DEAH box helicase [Enterococcus faecium E3083]
Length = 503
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 168/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P ++RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIISQVP------------------------EQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKSPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|407475055|ref|YP_006789455.1| DEAD/DEAH box helicase [Clostridium acidurici 9a]
gi|407051563|gb|AFS79608.1| DEAD-box ATP-dependent RNA helicase CshA [Clostridium acidurici 9a]
Length = 526
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 172/350 (49%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L+ ++K+I L F+EP+ IQK IP +G DVIG A+TG+GKTLAFG P++
Sbjct: 6 FKDLGLNEDILKAINELGFEEPSKIQKEAIPVVL-EGFDVIGQAQTGTGKTLAFGAPVIN 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + G + +++ITPTRELA+QV D + + K VR +
Sbjct: 65 KIKKS--------------------TGKISSIVITPTRELAIQVNDEISRIGKYTRVRTL 104
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG ++Q R +K +V+VGTPGR+ +L+ + +V+L ++F VLDEAD M++
Sbjct: 105 PVYGGKPIDRQIRAIKQGVDVLVGTPGRVLDLI---RRRVVDLSRVNFLVLDEADEMLDM 161
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II +NC + RQT++FSAT+
Sbjct: 162 GFIDDIEEII-----------------RNC-------PEDRQTMLFSATMP--------- 188
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I+ L+ ++ M+ ++ + + + + + + + E K+ ++
Sbjct: 189 --------------PQIKRLA-KSYMKEDMKHISIVKNTITVSTVSQYYFEIKQNNRFES 233
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL I+FC + + + L++ G +V +H M Q R+
Sbjct: 234 LCRILDYDEPSSAIIFCKTKKGVDELVEGLQVRGYNVEGMHGDMTQDHRM 283
>gi|418322741|ref|ZP_12934053.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
pettenkoferi VCU012]
gi|365231063|gb|EHM72126.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
pettenkoferi VCU012]
Length = 496
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + +++++ + F+EPTPIQ+ IP A +G+D++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISAKTVETLHNMGFEEPTPIQQESIPYAL-EGRDILGQAQTGTGKTGAFGIPLI- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK + ++ALI+ PTRELA+QV + L+ ++G VRVV
Sbjct: 62 --------------------EKVVGRDGVQALILAPTRELAMQVAEQLREFSEGQRVRVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK RP++VVGTPGR+ + ++ +HTL VLDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKRPQIVVGTPGRVIDHLNRRTLKTNGIHTL---VLDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +++RQT++FSAT+
Sbjct: 159 GFIDDMKFIMDKIP-----------------------KEQRQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+ L ++ N IV N + ++EE + KE +K
Sbjct: 187 --------------KAIQNLVQQ--FMNNPEIVKTMNNELSDPQIEEFYTIVKELEKFET 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHRPDLAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 159/357 (44%), Gaps = 76/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 294 SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTAAFIVPIL 352
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R I+ PTRELA+Q + +A ++
Sbjct: 353 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 393
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL +LDEADRM
Sbjct: 394 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILILDEADRM 451
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+ S D
Sbjct: 452 LEDGFAEELNEILTTIP------------------------KSRQTMLFSATMTSSVDKL 487
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KE 470
++ GLN L +VD V L + F+ +E
Sbjct: 488 IRV------------GLNKPIRL-----------MVDSKKQTV--GTLVQEFVRLRPGRE 522
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ + AYL ++ R IVF + + ++G+ LH M Q R+K
Sbjct: 523 DKRLAYLMFLCKTVYTSRVIVFFRQKKEAHRVRIVFGLMGLKAAELHGSMSQEQRIK 579
>gi|406864929|gb|EKD17972.1| ATP-dependent RNA helicase DBP8 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 872
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 74/415 (17%)
Query: 118 GVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFD-- 175
++ +E+ K+ + K K + V+E D E+ A IS D
Sbjct: 62 AIEMEEDATFKSALSVPSRFKSKIQAPTLVQE---------DVTEKHAENAGISVSVDRQ 112
Query: 176 -AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
++ L + P L+ ++ R+ PT IQK CIP +G+D IG + TGSGKT+AF +PI
Sbjct: 113 TSFASLDVKPWLVGALERMAINRPTGIQKGCIPEIL-KGRDCIGGSRTGSGKTVAFAVPI 171
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR 294
+Q E+ P G + A+++TPTRELALQ+ + +K ++ ++
Sbjct: 172 LQTWAED-------------------PFG-IFAVVLTPTRELALQIYEQIKAISSPQQLK 211
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRM 353
V I GG Q L RP +V+ TPGRL + + + GE + L + VLDEADR+
Sbjct: 212 AVLITGGSDMRPQATALAQRPHIVIATPGRLADHIRTSGEDTICGLRRVRMVVLDEADRL 271
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ +G S+ MLP + C ++ KRQTL+F+ATI + + R
Sbjct: 272 LASG------SVGSMLP-----------DVEECFSILP-SPAKRQTLLFTATI--TPEVR 311
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+LK G + V VD + + A +L + ++ +
Sbjct: 312 ------ALKDMPRTPGKPPV-----------FVCEVDTQKLAIPA-QLRQMHLQVPVTHR 353
Query: 474 DAYLYYIL--SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ YL+ L V+ Q I+FC A +++ LL++L V LH+++ QR R+
Sbjct: 354 EHYLHMFLLTDVNLQKSVIIFCNRTATADYLTHLLRLLEHRVTALHSKLPQRQRI 408
>gi|312112527|ref|YP_003990843.1| DEAD/DEAH box helicase [Geobacillus sp. Y4.1MC1]
gi|336236996|ref|YP_004589612.1| DEAD/DEAH box helicase [Geobacillus thermoglucosidasius C56-YS93]
gi|311217628|gb|ADP76232.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y4.1MC1]
gi|335363851|gb|AEH49531.1| DEAD/DEAH box helicase domain protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 465
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 169/356 (47%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L LMK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+P+++
Sbjct: 4 FYELGLSNELMKAIRRMGFEETTPIQAETIPLSL-QNKDVIGQAQTGTGKTAAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ D EA ++ L++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV------------DVTNEA--------IQGLVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK RP ++VGTPGR+ + ++ HL +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIGRQIRALKKRPHIIVGTPGRIIDHINRKTLHLENVHTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +KRQTL+FSAT+
Sbjct: 160 GFIDDIEAILSNVP------------------------EKRQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I ++ER + V M V +++ ++E +E+ K
Sbjct: 187 --------------EPIRRIAERFMNEPQIVKVKAKEMTV--PNIQQYYLEVQEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|189205104|ref|XP_001938887.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985986|gb|EDU51474.1| ATP-dependent rRNA helicase rrp3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 517
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 174/374 (46%), Gaps = 72/374 (19%)
Query: 154 SNGPDDAEEELVNEAEISTEFD-AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
S+ PD AEEE + E + +L + L + L+FK PTPIQ IP A +
Sbjct: 66 SSAPD-AEEEAEPATTGADEVKKTFADLGVREELCDACENLKFKNPTPIQTQAIPLAL-E 123
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
G+DVIG AETGSGKT AF LPI+Q LLE+ + L LI+ P
Sbjct: 124 GRDVIGLAETGSGKTAAFVLPILQSLLEKPQP--------------------LFGLILAP 163
Query: 273 TRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGG 332
TRELA Q+ + + INV+ +VGGM Q L RP +VV TPGRL + +
Sbjct: 164 TRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALSKRPHIVVATPGRLLDHLENT 223
Query: 333 EKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSL 392
+ L L + VLDEADR+++ L I+ +LP
Sbjct: 224 KG--FSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLP---------------------- 259
Query: 393 QRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLT 452
R+ R T +FSAT++ + +E+L +RA ++ V + +
Sbjct: 260 -REGRHTYLFSATMS-----------------------SKVESL-QRAALQNPVRVSISS 294
Query: 453 NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
+ + + L + + + KD YL ++L+ + TI+F ++ + I+ LL+ LG
Sbjct: 295 SSHQVVSTLLQRYAFIPHKYKDLYLVHLLNDNIGHPTIIFTRTVNETQRIAVLLRALGFG 354
Query: 513 VWTLHAQMQQRARL 526
LH Q+ Q ARL
Sbjct: 355 AIPLHGQLSQSARL 368
>gi|417644460|ref|ZP_12294450.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus warneri
VCU121]
gi|330684829|gb|EGG96522.1| DEAD-box ATP-dependent RNA helicase CshA [Staphylococcus
epidermidis VCU121]
Length = 509
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 176/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + ++++ + FKEPTPIQK IP A +G D++G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGHDILGQAQTGTGKTGAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+++ GE+ +++LI+ PTRELA+QV + LK +KG NV+VV
Sbjct: 63 KVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+TL ++ I+ N + +++E + KE +K
Sbjct: 187 --------------KAIQTLVQQ--FMKTPKIIKTMNNEMSDPQIDEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|445059172|ref|YP_007384576.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
gi|443425229|gb|AGC90132.1| DEAD-box ATP dependent DNA helicase [Staphylococcus warneri SG1]
Length = 509
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 176/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + ++++ + FKEPTPIQK IP A +G D++G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGHDILGQAQTGTGKTGAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+++ GE+ +++LI+ PTRELA+QV + LK +KG NV+VV
Sbjct: 63 KVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+TL ++ I+ N + +++E + KE +K
Sbjct: 187 --------------KAIQTLVQQ--FMKTPKIIKTMNNEMSDPQIDEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 168/375 (44%), Gaps = 79/375 (21%)
Query: 160 AEEELVNEAEISTEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
A EE V E++ ++ A + L L +++ + + F PTPIQ+ IP A GKDV+G
Sbjct: 281 APEEQVTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVG 339
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTREL 276
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 340 GAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTREL 380
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A+Q + +A ++ +VGG S +QE +LK RP+V++ TPGR + M
Sbjct: 381 AVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 440
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 441 VD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------KS 474
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMC 455
RQT++FSAT+ NS++ L R G+ V + VD
Sbjct: 475 RQTMLFSATMT-----------------------NSVDKLI-RVGLNKPVRLMVDSKKQT 510
Query: 456 VLANKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
V L + F+ + E+ + YL ++ R IVF + + ++G+
Sbjct: 511 V--GTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIIFGLMGLK 568
Query: 513 VWTLHAQMQQRARLK 527
LH M Q R+K
Sbjct: 569 AAELHGSMSQEQRIK 583
>gi|323485816|ref|ZP_08091151.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
gi|323400804|gb|EGA93167.1| ATP-dependent RNA helicase RhlE [Clostridium symbiosum WAL-14163]
Length = 458
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 173/356 (48%), Gaps = 67/356 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L PLL+K++ + P+PIQ+ IP G+DV+G A+TG+GKT AF LPI+Q
Sbjct: 15 FKDLQLSPLLLKALEEKGYVSPSPIQEKAIPHVL-AGRDVLGCAQTGTGKTAAFALPIIQ 73
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L++ EK KY+ K +R+LI+TPTR+LALQ+ ++ K +VR
Sbjct: 74 NLMKPSEK-------------KYS-KRVIRSLILTPTRKLALQIAENFKEYGSRTSVRCA 119
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+S Q L+ +++V TPGRL +L+ G V+L + FVLDEADRM++
Sbjct: 120 VIFGGVSANPQIEELRRGIDILVATPGRLNDLVGQG---FVDLAYVEIFVLDEADRMLDM 176
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II +LP+ ++QTL+FSAT+
Sbjct: 177 GFIHDVKKIISLLPV------------------------RKQTLLFSATMP--------- 203
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I+ L+++ + N A V++T + + ++ S +E+K +
Sbjct: 204 --------------AEIQALTDK--LLHNPARVEVTPVSSTVDIIDASLYYVDKENKRSL 247
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L Y+L+ T+VF + ++ L I +H Q AR S
Sbjct: 248 LVYLLNHEDITSTLVFTRTKHGADRVAKFLVKNRISAAAIHGDKSQGARQTALSHF 303
>gi|239637375|ref|ZP_04678357.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
gi|239596975|gb|EEQ79490.1| cold-shock DEAD box protein A [Staphylococcus warneri L37603]
Length = 509
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 176/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + ++++ + FKEPTPIQK IP A +G D++G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGISDKTVQTLESMGFKEPTPIQKDSIPYAL-EGHDILGQAQTGTGKTGAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+++ GE+ +++LI+ PTRELA+QV + LK +KG NV+VV
Sbjct: 63 KVV-------------GEQG--------VQSLILAPTRELAMQVAEQLKVFSKGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM E+Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+TL ++ I+ N + +++E + KE +K
Sbjct: 187 --------------KAIQTLVQQ--FMKTPKIIKTMNNEMSDPQIDEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|397474910|ref|XP_003808899.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Pan paniscus]
Length = 455
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 172/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P + + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTETSQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|402885238|ref|XP_003906071.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Papio anubis]
Length = 455
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + ++ E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPVMEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|390598048|gb|EIN07447.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 449
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 168/365 (46%), Gaps = 82/365 (22%)
Query: 167 EAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
EA ST + L L L++++ +L++KEPT IQ+ +P A +G+D+IG A TGSGK
Sbjct: 6 EASTSTAEPTFKSLGLINPLLEALDQLKYKEPTDIQREALPHAL-EGRDIIGVASTGSGK 64
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
T AF LPI+Q+L EE P+G L A ++ PTRELA Q++ +
Sbjct: 65 TAAFALPILQKLWEE-------------------PRG-LFACVLAPTRELAYQISQQFEA 104
Query: 287 VAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE-----LHT 341
+ + VR +VGGM Q L +P ++V TPGRL ++HL E L
Sbjct: 105 LGSAMGVRCAVLVGGMDLIDQAVALAKKPHIIVATPGRL-------QQHLTETKGFSLRG 157
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
L F VLDEADR+++ + I+ ++P K+R T +
Sbjct: 158 LKFLVLDEADRLLDLDFGPVIDQILKIIP------------------------KERTTYL 193
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT+ KL+ SL + V + +T+S L
Sbjct: 194 FSATMTTKV---AKLQRASLSNPIRVEVSSKYQTVS----------------------TL 228
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ ++ KD +L Y+ + I+F ++ + +S +L+ILG LH Q+
Sbjct: 229 LQYYLFIPLSQKDVHLIYLANSLASNSIIIFTRTVHDAQRLSIMLRILGFPAVPLHGQLS 288
Query: 522 QRARL 526
Q ARL
Sbjct: 289 QSARL 293
>gi|255538978|ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 783
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 193/409 (47%), Gaps = 80/409 (19%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
EE V++ D+ + + S +++ E+ L L+++ L + +PTPIQ ACIP
Sbjct: 120 EEDEDVAHNADETKSFFASAEGASFHANSFMEINLSRPLLRACEVLGYTKPTPIQAACIP 179
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHL 265
A G+D+ G+A TGSGKT AF LP ++RLL + PK +
Sbjct: 180 LAL-TGRDICGSAITGSGKTAAFALPTLERLL-------------------FRPKRVQAI 219
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
R LI+TPTRELA+QV ++ +A+ ++R IVGG+ST+ QE L++ P++VV TPGR+
Sbjct: 220 RVLILTPTRELAVQVHSMVEKLAQFTDIRCCLIVGGLSTKVQESALRSMPDIVVATPGRM 279
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + V+L L+ +LDEADR++E G E+ ++ + P
Sbjct: 280 IDHLRNTMS--VDLDDLAVLILDEADRLLELGFSAEIHELVRLCP--------------- 322
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
K+RQT++FSAT+ + +N L + +L++ + A+
Sbjct: 323 ---------KRRQTMLFSATMT-----------------EEINELIKL-SLTKPLRLSAD 355
Query: 446 VAI---VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHI 502
+ LT V ++ +E +++A L + S R I+F + A +
Sbjct: 356 PSTKRPATLTEEVVRIRRM-------REVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRL 408
Query: 503 SSLLKILGIDVWTLHAQMQQRAR---LKLF-SQMITWIRKRPKGDRGKD 547
L + G LH + Q R L+LF Q + ++ RG D
Sbjct: 409 KILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDFLIATDVAARGLD 457
>gi|452839340|gb|EME41279.1| hypothetical protein DOTSEDRAFT_73630 [Dothistroma septosporum
NZE10]
Length = 513
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 191/436 (43%), Gaps = 78/436 (17%)
Query: 98 SSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETG-------KKKKKKKKGKKIKTVEES 150
SSA G+G +D S VQ ++ + +T K K ++ K
Sbjct: 2 SSAKRRKVSHGEG---KDASPVQVPKKIAKRKDTASGHEAPAKAAPSKPSPERNKRAHSE 58
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
V GP EEE + + E ++ EL + L + L F +PT IQK IP A
Sbjct: 59 VEGDVGPAAEEEEAMGASPSKEEDKSFAELGVIDQLCDACANLGFTKPTAIQKESIPIAL 118
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
+GKD+IG AETGSGKT AF LPI+Q L+ AA E H L++
Sbjct: 119 -EGKDIIGLAETGSGKTAAFALPILQALM-----AAPQHEQ------------HKFGLVL 160
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
PTRELA Q++ + + INVR +VGGM Q L P +VV TPGRL + +
Sbjct: 161 APTRELAYQISQQFEALGSLINVRCAVLVGGMDMVPQAIALNKNPHIVVATPGRLLDHLE 220
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ + +L + V+DEADR+++ L I+ +LP
Sbjct: 221 NTKG--FSMRSLKYLVMDEADRLLDLDFGPILDKILQVLP-------------------- 258
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
KR+T++FSAT++ LN++ RA ++ V +
Sbjct: 259 ----SKRRTMLFSATMS--------------------TKLNNL----TRAALQNPVRVSI 290
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
++ L + +I + KD YL Y+L+ IVF +I + I+ LL+ LG
Sbjct: 291 SSSSYQTVKNLMQRYIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETQRIAFLLRALG 350
Query: 511 IDVWTLHAQMQQRARL 526
LH QM Q ARL
Sbjct: 351 RSAIPLHGQMNQSARL 366
>gi|310641357|ref|YP_003946115.1| DEAD/DEAH box helicase [Paenibacillus polymyxa SC2]
gi|386040399|ref|YP_005959353.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
gi|309246307|gb|ADO55874.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
polymyxa SC2]
gi|343096437|emb|CCC84646.1| DEAD-box ATP-dependent RNA helicase ydbR [Paenibacillus polymyxa
M1]
Length = 525
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 170/354 (48%), Gaps = 83/354 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E L P ++++I L F+E TPIQ IP A QGKD+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSKSIPIAL-QGKDMIGQAQTGTGKTAAFGIPMIN 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EK +RALI+ PTRELA+QV + ++ +++ +R +
Sbjct: 63 KISKNDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K +H S+ KQ V A +++++IE E
Sbjct: 196 FLKDPEHVSVIPKQ------------------------------VSAPLIDQAYIEVPER 225
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L ++ + IVF + + ++ L+ G LH + Q R
Sbjct: 226 QKFEALSRLIDMESPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQR 279
>gi|302886563|ref|XP_003042171.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256723080|gb|EEU36458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 490
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 166/350 (47%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L ++ L ++ L +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LP++Q
Sbjct: 67 FKDLGVNDALCEACEALNYKYPTPIQEKSIPVAL-QGRDIIGLAETGSGKTAAFALPVLQ 125
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL++ + L L++ PTRELA Q+ + + I++R
Sbjct: 126 ALLDKPQP--------------------LFGLVLAPTRELATQIGQAFEALGSLISLRCA 165
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P ++V TPGRL + + + L TL + ++DEADR+++
Sbjct: 166 VIVGGLDMVPQAIALGKKPHIIVATPGRLVDHLEKTKGF--SLRTLKYLIMDEADRLLDM 223
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ I+ +P ++R+T +FSAT++
Sbjct: 224 DFGPSIDKILKFIP------------------------RERRTYLFSATLS--------- 250
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ IE+L +RA +R V + +N + L + ++ KD Y
Sbjct: 251 --------------SKIESL-QRASLRDPVRVSISSNKYQTVSTLIQHYMFIPFPQKDTY 295
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+++ H TIVF ++ + ++ LL+ LG LH Q+ Q +RL
Sbjct: 296 LVYLVNEHTGKSTIVFTRTVWETQRVAILLRTLGFGAIPLHGQLSQSSRL 345
>gi|148237396|ref|NP_001085167.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Xenopus laevis]
gi|47938654|gb|AAH72214.1| MGC81303 protein [Xenopus laevis]
Length = 448
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ +L +K+PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q
Sbjct: 21 FRDLGVTDVLCEACEQLGWKQPTKIQIEAIPMAL-QGRDIIGLAETGSGKTGAFALPILQ 79
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE ++ L AL++TPTRELA Q+++ + + I V+
Sbjct: 80 TLLESPQR--------------------LYALVLTPTRELAFQISEQFEALGSSIGVKSA 119
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ Q L +P +V+ TPGRL + + + L + + V+DEADR++
Sbjct: 120 VIVGGIDMMSQSLALAKKPHIVIATPGRLIDHLENTKG--FNLRAIKYLVMDEADRILNM 177
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P + R+T +FSAT+ KL
Sbjct: 178 DFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---HKL 210
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK + +T+ KL++ ++ + KD+Y
Sbjct: 211 QRAALKDPVKCAVSSKYQTV----------------------EKLQQFYVFIPSKFKDSY 248
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ ++FC++ + ++ LL+ LG LH QM Q RL
Sbjct: 249 LVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMGQNKRL 298
>gi|440486596|gb|ELQ66446.1| ATP-dependent rRNA helicase rrp3 [Magnaporthe oryzae P131]
Length = 538
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 178/381 (46%), Gaps = 79/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
TVEE+ + + EL ++ E T+ ++ +L + L ++ L+FK+PTPIQ+
Sbjct: 89 TVEEAT------KEGQTELPSKEETPTK--SFRDLGIVEPLCEACEALKFKKPTPIQEQA 140
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A QG+DVIG AETGSGKT AF LPI+Q LLE+ + L
Sbjct: 141 IPLAL-QGRDVIGIAETGSGKTAAFALPILQSLLEKPQP--------------------L 179
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
L++ PTRELA Q+ + + I++R +VGG+ Q L +P +VV TPGRL
Sbjct: 180 FGLVLAPTRELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSIALGKKPHIVVATPGRL 239
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L +L F V+DEADR+++ L I+ LP
Sbjct: 240 LDHLEKTKG--FSLRSLKFLVMDEADRLLDLDFGPILDKILKFLP--------------- 282
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
++R+T +FSAT++ + L+ SL+ V+ +S E
Sbjct: 283 ---------RERRTFLFSATMSSKVE---SLQRASLRDPLKVSVSSSQEK---------- 320
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
T ++ N L FI K KD YL Y+ + TIVF ++ + +S L
Sbjct: 321 ------TVSTLIQNPL---FIPHKH--KDVYLIYLANEFAGKTTIVFTRTVNEAQRVSIL 369
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ L LH Q+ Q RL
Sbjct: 370 LRTLSFGAIPLHGQLSQSMRL 390
>gi|346327204|gb|EGX96800.1| ATP dependent RNA helicase (Dbp8) [Cordyceps militaris CM01]
Length = 575
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 206/447 (46%), Gaps = 73/447 (16%)
Query: 92 SKKRKRSSAN-----EEDSG---DGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKK 143
S+K++R+S + ED G D D + D D K+ K + + KK+G
Sbjct: 54 SRKQRRTSQDGSSDESEDGGAQVDSDDNNDHDEPENLKETMKPILTSFAAPSRIKKRGTV 113
Query: 144 IKTVEESVA-VSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQ 202
+ SV + A ++ + +T F A LR+ P L++S+ + + PT IQ
Sbjct: 114 TAPAKPSVKEAALDAGAASAPVLAPTDPNTTFTA---LRVRPWLVQSLANMAIRRPTGIQ 170
Query: 203 KACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK 262
KACIP QG+D IG + TGSGKT+AF +P++QR E+
Sbjct: 171 KACIPEIL-QGRDCIGGSRTGSGKTVAFAVPMLQRWAED--------------------P 209
Query: 263 GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTP 322
+ L++TPTRELALQ+ + + +A +++V+ I GG Q L+ RP VV+ TP
Sbjct: 210 TAIFGLVLTPTRELALQIYEQFRAIAAPQSLKVLLITGGADMRPQAIALRQRPHVVIATP 269
Query: 323 GRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE 381
GRL + + + GE + L + + VLDEADR++ G GS E
Sbjct: 270 GRLADHVRTSGEDTVGGLRRVRYVVLDEADRLLHAG-------------AGPGSMLPDVE 316
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAG 441
Q + + +RQTL+F+AT ++ + R KQ V
Sbjct: 317 QCLAALPPPT----ERQTLLFTAT--MTPEVRALAAMPVKPGKQPV-------------- 356
Query: 442 MRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLY-YILSVHGQGRTIV-FCTSIAAL 499
V VD + + A L + ++ K+ YL+ ++L+ +TI+ FC A
Sbjct: 357 ---FVCEVDTQRLAIPAT-LRQRHLQIPVTHKEHYLHMFLLTEANVDKTIILFCNRTATA 412
Query: 500 RHISSLLKILGIDVWTLHAQMQQRARL 526
+ +L++L V +LH+++ QR R+
Sbjct: 413 DFLHHMLRLLDHRVTSLHSKLPQRQRV 439
>gi|309792104|ref|ZP_07686577.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG-6]
gi|308225848|gb|EFO79603.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG6]
Length = 422
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 47/230 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ + LHP LM+++ F +PTPIQ IP A G+++IG A+TG+GKT AF LPI+Q
Sbjct: 3 FADFALHPALMQNVSAQGFTQPTPIQAQTIPLAL-SGQNLIGLAQTGTGKTAAFVLPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL+ R++ + ALI+TPTRELA Q+ D ++ +A G +R
Sbjct: 62 RLLQNRQRGTQ-------------------ALIVTPTRELAEQINDTIRVLAHGTGLRSA 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG+ E QER L+A E+VV PGRL + + G L + VLDEADRM++
Sbjct: 103 PIYGGVGMEPQERALRAGVEIVVACPGRLIDHLGRGS---ARLDGVQMLVLDEADRMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
G +Q I+ LP +RQT++FSAT+
Sbjct: 160 GFLPAIQRILSALP------------------------TRRQTMLFSATL 185
>gi|392297967|gb|EIW09066.1| Drs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 748
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 226 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 284
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 285 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 327
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 328 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 385
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 386 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 414
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 415 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 456
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 457 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 515
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 161/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 305 SFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIIPIL 363
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R +I+ PTRELA+Q + +A ++
Sbjct: 364 ERLL-------------------YRPRKVPTSRVVILMPTRELAVQCYNVATKLATFTDI 404
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 405 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 462
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+
Sbjct: 463 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMT------ 492
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIEC---K 469
N+++ L R G+ V + VD V L + F+ +
Sbjct: 493 -----------------NNVDKLI-RVGLNRPVRLMVDAKKQTV--GTLIQEFVRLRPGR 532
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
EE + YL + + R IVF S + + +LG+ V LH M Q R+K
Sbjct: 533 EEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVTELHGSMSQEQRIK 590
>gi|225556564|gb|EEH04852.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces capsulatus G186AR]
Length = 485
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 177/385 (45%), Gaps = 74/385 (19%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+E + N DD ++ E ++ F +L + L ++ L +K PTPIQ IP
Sbjct: 35 DEQLTAVNEQDDESPQVQREEAVTKSF---KDLGIIDSLCEACEALGYKSPTPIQAESIP 91
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
A QG+D+IG AETGSGKT AF LPI+Q L+ + + L
Sbjct: 92 LAL-QGRDLIGLAETGSGKTAAFALPILQALMNKPQS--------------------LFG 130
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
LI+ PTRELA Q+++ + + I+VR IVGGM Q L +P ++V TPGRL +
Sbjct: 131 LILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPGRLLD 190
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ + L L + V+DEADR+++ L I+ +LP
Sbjct: 191 HLENTKG--FSLRNLKYLVMDEADRLLDLDFGPILDKILKVLP----------------- 231
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
++R+T +FSAT++ + +E+L +RA + +
Sbjct: 232 -------RERRTYLFSATMS-----------------------SKVESL-QRASLSNPLR 260
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
+ +N L +S++ + KD YL Y+L+ + IVF ++ + ++ LL+
Sbjct: 261 VSISSNKYQTVATLLQSYLFIPHKYKDVYLVYLLNEYAGQSAIVFTRTVNETQRLAILLR 320
Query: 508 ILGIDVWTLHAQMQQRARLKLFSQM 532
LG LH Q+ Q +RL S+
Sbjct: 321 ALGFGSIPLHGQLSQSSRLGALSKF 345
>gi|209517599|ref|ZP_03266438.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
gi|209502012|gb|EEA02029.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. H160]
Length = 510
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 67/364 (18%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+++ ++ + +++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+
Sbjct: 23 MSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVL-AGRDVMGAAQTGT 81
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 283
GKT +F LPI+QRLL + +A +P H +RALI+TPTRELA QV +
Sbjct: 82 GKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAAN 128
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 129 VQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 185
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 186 MLVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 221
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT S + KKL L++ Q++ S T A + +
Sbjct: 222 AT--FSGEI-KKLAATYLRNPQTIEVARSNST----------------------ATNVTQ 256
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
E E DK + ++ G + IVFC S ++ L+ G+ +H Q
Sbjct: 257 VVYEVAEGDKTGAVVKLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQS 316
Query: 524 ARLK 527
R++
Sbjct: 317 ERMQ 320
>gi|117646246|emb|CAL38590.1| hypothetical protein [synthetic construct]
gi|208967637|dbj|BAG72464.1| apolipoprotein L domain containing 1 [synthetic construct]
Length = 455
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 172/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETG GKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGPGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|56119032|ref|NP_001007854.1| probable ATP-dependent RNA helicase DDX47 [Gallus gallus]
gi|53130308|emb|CAG31483.1| hypothetical protein RCJMB04_6o10 [Gallus gallus]
Length = 453
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 72/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + +L ++ +L +K PT IQ IP A QG+D+IG AETGSGKT AF LPI+
Sbjct: 26 SFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVAL-QGRDIIGLAETGSGKTGAFALPIL 84
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q LL+ AP+ L AL++TPTRELA Q+++ + + I V
Sbjct: 85 QALLD-------------------APQ-RLFALVLTPTRELAFQISEQFEALGSSIGVHS 124
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGG+ + Q L +P +++ TPGRL + + + L L F V+DEADR++
Sbjct: 125 AVIVGGIDSMSQSLALAKKPHIIIATPGRLVDHLENTKGF--NLRALKFLVMDEADRILN 182
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E+ I+ ++P + R+T +FSAT+ +K
Sbjct: 183 MDFETEVDKILKVIP------------------------RDRKTFLFSATMTKQV---QK 215
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ +LK+ + +T+ KL++ +I + KD+
Sbjct: 216 LQRAALKNPVKCAVSSKYQTV----------------------EKLQQYYIFIPSKFKDS 253
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL YIL+ ++FC++ + + LL+ LG LH QM Q RL
Sbjct: 254 YLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRL 304
>gi|160380652|sp|A7A0P8.1|DRS1_YEAS7 RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|151941161|gb|EDN59539.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406035|gb|EDV09302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207343227|gb|EDZ70754.1| YLL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 754
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 232 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 290
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 291 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 333
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 334 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 391
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 392 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 420
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 421 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 462
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 463 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 521
>gi|6323021|ref|NP_013093.1| Drs1p [Saccharomyces cerevisiae S288c]
gi|1706521|sp|P32892.2|DRS1_YEAST RecName: Full=ATP-dependent RNA helicase DRS1; AltName:
Full=Deficiency of ribosomal subunits protein 1
gi|1360171|emb|CAA97452.1| DRS1 [Saccharomyces cerevisiae]
gi|1495215|emb|CAA62783.1| L1345/DRS1 protein [Saccharomyces cerevisiae]
gi|285813414|tpg|DAA09310.1| TPA: Drs1p [Saccharomyces cerevisiae S288c]
Length = 752
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 230 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 288
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 289 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 331
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 332 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 389
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 390 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 418
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 419 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 460
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 461 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 519
>gi|451852848|gb|EMD66142.1| hypothetical protein COCSADRAFT_179496 [Cochliobolus sativus
ND90Pr]
Length = 814
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 156/358 (43%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F EPTPIQ +P A QGKDV+G AETGSGKT AF +PI+
Sbjct: 289 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIA-MQGKDVVGGAETGSGKTAAFLIPIL 347
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RLL ++K R I PTRELA+Q + +A ++
Sbjct: 348 ERLLYRQKKIPTT-----------------RVAIFMPTRELAVQCFNVATKLASFTDITF 390
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG S+ +QE +LK RP+VV+ TPGR + M VE L VLDEADRM+E
Sbjct: 391 ALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--NLEILVLDEADRMLE 448
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD---- 411
G +L I+ +P K RQT++FSAT+ S D
Sbjct: 449 EGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVDKLIR 484
Query: 412 --FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
K ++ KQ+V GL E + R G K
Sbjct: 485 IGMDKPVRLMVDAKKQTVKGLTQ-EFVRLRQG---------------------------K 516
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + AYL YI + IVF + + + G+ LH M Q R++
Sbjct: 517 EDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQ 574
>gi|323303947|gb|EGA57727.1| Drs1p [Saccharomyces cerevisiae FostersB]
Length = 755
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 233 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 291
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 292 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 334
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 335 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 392
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 393 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 421
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 422 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 463
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 464 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 522
>gi|349579719|dbj|GAA24880.1| K7_Drs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 756
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 234 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 292
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 293 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 335
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 336 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 393
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 394 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 422
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 423 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 464
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 465 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 523
>gi|259147982|emb|CAY81231.1| Drs1p [Saccharomyces cerevisiae EC1118]
Length = 754
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 232 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 290
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 291 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 333
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 334 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 391
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 392 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 420
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 421 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 462
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 463 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 521
>gi|256272311|gb|EEU07295.1| Drs1p [Saccharomyces cerevisiae JAY291]
Length = 751
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 229 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 287
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 288 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 330
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 331 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 388
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 389 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 417
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 418 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 459
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 460 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 518
>gi|255719254|ref|XP_002555907.1| KLTH0H00638p [Lachancea thermotolerans]
gi|238941873|emb|CAR30045.1| KLTH0H00638p [Lachancea thermotolerans CBS 6340]
Length = 433
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 68/359 (18%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+S+EF L + L++++ ++ +PT IQKACIP QGKD IG A+TGSGKT+A
Sbjct: 1 MSSEFAT---LGISKWLVEALQAMKITQPTAIQKACIPQIL-QGKDCIGGAKTGSGKTIA 56
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
FG P++ + E+ P G + +++TPTRELA+Q+ + +
Sbjct: 57 FGAPMLTKWSED-------------------PSG-MFGVVLTPTRELAMQIAEQFTALGS 96
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL-WELMSGGEKHLVELHTLSFFVLD 348
+N+RV +VGG S Q L+ +P +V TPGR+ +M+ GE + L F VLD
Sbjct: 97 SMNIRVALVVGGESIVDQAINLQRKPHFIVATPGRMAHHIMNSGEDTIGGLKRAKFLVLD 156
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EAD ++ + L + I +LP ++KRQTL+F+AT+
Sbjct: 157 EADILLTDTFSEHLATCISILP----------------------PKEKRQTLLFTATV-- 192
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
D K L++ + + L S E V+ + + + L+ +++
Sbjct: 193 -TDQVKALQNAP--AAEGKPPLFSYE--------------VESMDKVAIPSTLKTTYLLV 235
Query: 469 KEEDKDAYLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E+ K+AYLY IL+ + + I+F + LK L + V +LH+QM Q+ R
Sbjct: 236 PEQVKEAYLYQILTNATYNESSAIIFVNRTVTAEILRRTLKQLDVRVASLHSQMPQQER 294
>gi|452002395|gb|EMD94853.1| hypothetical protein COCHEDRAFT_1128751 [Cochliobolus
heterostrophus C5]
Length = 815
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 156/358 (43%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F EPTPIQ +P A QGKDV+G AETGSGKT AF +PI+
Sbjct: 290 SFQAMSLSRPILRGLASVGFTEPTPIQSKAVPIAM-QGKDVVGGAETGSGKTAAFLIPIL 348
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RLL ++K R I PTRELA+Q + +A ++
Sbjct: 349 ERLLYRQKKIPTT-----------------RVAIFMPTRELAVQCFNVATKLASFTDITF 391
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG S+ +QE +LK RP+VV+ TPGR + M VE L VLDEADRM+E
Sbjct: 392 ALMAGGFSSREQEAVLKTRPDVVIATPGRFIDHMHNTAAFQVE--NLEILVLDEADRMLE 449
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD---- 411
G +L I+ +P K RQT++FSAT+ S D
Sbjct: 450 EGFESQLNEILTTIP------------------------KSRQTMLFSATMTSSVDKLIR 485
Query: 412 --FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
K ++ KQ+V GL E + R G K
Sbjct: 486 IGMDKPVRLMVDSKKQTVKGLTQ-EFVRLRQG---------------------------K 517
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + AYL YI + IVF + + + G+ LH M Q R++
Sbjct: 518 EDKRLAYLMYICEKIYTEKVIVFFRQKKEAHRVRVVFALCGLKASELHGNMSQEQRIQ 575
>gi|449516409|ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 168/354 (47%), Gaps = 70/354 (19%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ EL L L+++ L + +PTPIQ ACIP A G+D+ G+A TGSGKT AF LP
Sbjct: 135 NSFMELNLSRPLIRACEALGYAKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPT 193
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL Y PK +R LI+TP RELA+QV ++ +A+ +
Sbjct: 194 LERLL-------------------YRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTD 234
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+S ++QE L++ P+VVV TPGR+ + + V+L L+ +LDEADR
Sbjct: 235 IRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS--VDLDDLAVLILDEADR 292
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++E G E++ ++ + P K+RQT++FSAT+ +
Sbjct: 293 LLELGFSAEIRELVRLCP------------------------KRRQTMLFSATMTEEVNE 328
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
KL + +TL+E +V L M +E +
Sbjct: 329 LIKLSLTKPLRLSADPATKRPKTLTEE--------VVRLRRM--------------REVN 366
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++A L + S + IVF + A + L + G LH + Q RL
Sbjct: 367 QEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRL 420
>gi|194863293|ref|XP_001970368.1| GG23409 [Drosophila erecta]
gi|190662235|gb|EDV59427.1| GG23409 [Drosophila erecta]
Length = 526
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 169/364 (46%), Gaps = 75/364 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + + L L P L+K + +L K TPIQ+ CIPA G+D IGAA+TGSGKT AF L
Sbjct: 5 ETNPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAIL-AGQDCIGAAKTGSGKTFAFAL 63
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI++RL EE P H AL++TPT ELA Q+++ + +
Sbjct: 64 PILERLSEE-------------------PVSHF-ALVLTPTHELAYQISEQFLVAGQAMG 103
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
VRV + GG + + L RP +VV PGRL + ++G + L + V+DEADR
Sbjct: 104 VRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDT--FSFDNLKYLVVDEADR 161
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+ NG F E +II + C+ KKRQ L FSAT+ DF
Sbjct: 162 ML-NGDFDESLAII-----------------ERCLP------KKRQNLFFSATM---KDF 194
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
K+ + + I + ++VA VD L++ ++ C + D
Sbjct: 195 IKE------------SSIFPIASDCFEWSQDSDVATVD---------TLDQRYLLCADYD 233
Query: 473 KDAYLYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKL 528
+D L L + + ++F + + +S LK + ID LH M+Q+ R+
Sbjct: 234 RDMVLIEALRKYREENESANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERVAA 293
Query: 529 FSQM 532
S+
Sbjct: 294 LSRF 297
>gi|62897439|dbj|BAD96660.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 variant [Homo
sapiens]
Length = 448
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 172/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P +A + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 1 DSPTEASQPIVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 55
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 56 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 95
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 96 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 155
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ + P
Sbjct: 156 F--NLRALKYLVMDEADRILNMDFETEVDKILKVNP------------------------ 189
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 190 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 228
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 229 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 284
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 285 PLHGQMSQSKRL 296
>gi|295675961|ref|YP_003604485.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1002]
gi|295435804|gb|ADG14974.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1002]
Length = 484
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 67/364 (18%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+++ ++ + +++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+
Sbjct: 1 MSDTAVTPSTETFDQFGLAPDILKAIKESGYTSPTPIQAKAIPVVL-AGRDVMGAAQTGT 59
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 283
GKT +F LPI+QRLL + +A +P H +RALI+TPTRELA QV +
Sbjct: 60 GKTASFSLPIIQRLLPQANTSA-------------SPARHPVRALILTPTRELADQVAAN 106
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 107 VQAYAKHTALRSAVVFGGVDMNPQSDQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 163
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 164 MLVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 199
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT S + KKL L++ Q++ S T A + +
Sbjct: 200 AT--FSGEI-KKLAATYLRNPQTIEVARSNST----------------------ATNVTQ 234
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
E E DK + ++ G + IVFC S ++ L+ G+ +H Q
Sbjct: 235 VVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQS 294
Query: 524 ARLK 527
R++
Sbjct: 295 ERMQ 298
>gi|195437654|ref|XP_002066755.1| GK24389 [Drosophila willistoni]
gi|194162840|gb|EDW77741.1| GK24389 [Drosophila willistoni]
Length = 808
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 178/357 (49%), Gaps = 41/357 (11%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +WNE P ++ I R+ +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 375 IPNPIRSWNESGFPPEIIDIIDRVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 433
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + + + LED + P A+I+ PTRELA Q+ + +
Sbjct: 434 FLIPLLSWI--QSLPKIERLEDVDQ-----GP----YAIIMAPTRELAQQIEEETTKFGQ 482
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 483 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 539
Query: 350 ADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
ADRMI+ G ++Q I++ +P+TN + ++E + ++K RQT++F+AT+
Sbjct: 540 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDESKLMENFYTKKKYRQTVMFTATMPP 599
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + +L L+ +V + S+ +ER E+
Sbjct: 600 AVE---RLARSYLRRPATVY-IGSVGKPTERT---------------------EQIVYMM 634
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E DK L ILS I+F ++ L+ LG + TLH Q R
Sbjct: 635 GENDKRKKLMEILSRSIDPPIIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 691
>gi|330923108|ref|XP_003300102.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
gi|311325897|gb|EFQ91780.1| hypothetical protein PTT_11258 [Pyrenophora teres f. teres 0-1]
Length = 516
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 157/334 (47%), Gaps = 70/334 (20%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L+FK PTPIQ IP A +G+DVIG AETGSGKT AF LPI+Q LLE+ +
Sbjct: 104 LKFKNPTPIQTQAIPLAL-EGRDVIGLAETGSGKTAAFVLPILQSLLEKPQP-------- 154
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L LI+ PTRELA Q+ + + INV+ +VGGM Q L
Sbjct: 155 ------------LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALS 202
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
RP +VV TPGRL + + + L L + VLDEADR+++ L I+ +LP
Sbjct: 203 KRPHIVVATPGRLLDHLENTKG--FSLKHLKYMVLDEADRLLDLDFGPVLDKILKVLP-- 258
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
R+ R T +FSAT++ +
Sbjct: 259 ---------------------REGRHTYLFSATMS-----------------------SK 274
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E L +RA ++ V + ++ + + L + + + KD YL ++L+ + TI+F
Sbjct: 275 VENL-QRAALQNPVRVSISSSSHQVVSTLLQRYAFIPHKYKDLYLIHLLNDNIGHPTIIF 333
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + I+ LL+ LG LH Q+ Q ARL
Sbjct: 334 TRTVNETQRIAVLLRALGFGAIPLHGQLSQSARL 367
>gi|448528530|ref|XP_003869731.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis Co 90-125]
gi|380354084|emb|CCG23598.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis]
Length = 632
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 176/360 (48%), Gaps = 77/360 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ EL+L ++KSI L F PTPIQ + IP A GKD++ A+TGSGKT A+ +P++
Sbjct: 154 TFQELQLSRPILKSIQSLSFTSPTPIQSSTIPIALL-GKDIVAGAQTGSGKTAAYLIPLI 212
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVR 294
+RL+ + + K A+I+ PTRELA+QV D + + + + N+
Sbjct: 213 ERLIFKNSTSTK-------------------AIILAPTRELAIQVYDVGRKLGQFVKNLS 253
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
VGG++ +QE+ LK+RP++V+ TPGRL + + VE + V+DEADRM+
Sbjct: 254 FGLAVGGLNLRQQEQQLKSRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLVIDEADRML 311
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E G EL I+ ++P ++KRQTL+FSAT+
Sbjct: 312 EEGFQEELTEILSLIP-----------------------KQKRQTLLFSATMN------- 341
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED-- 472
++ L + + + ++D +A++LE+ F+ ++ +
Sbjct: 342 ----------------TKVQDLVQLSLNKPVRVMIDPPK--TVASRLEQQFVRIRKRESL 383
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL---KLF 529
K A L+ +L GR +VF + + +L +LG+ V LH + Q RL KLF
Sbjct: 384 KPALLFQLLR-KLDGRIVVFVSRKEMAHKLRVILGLLGLKVAELHGALTQEQRLANMKLF 442
>gi|421099117|ref|ZP_15559777.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. 200901122]
gi|410797851|gb|EKR99950.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. 200901122]
Length = 513
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q R L+ P++V+ TPGR+ + M G + L+ + +LDEAD M++
Sbjct: 105 VPVYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|449460106|ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 168/354 (47%), Gaps = 70/354 (19%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ EL L L+++ L + +PTPIQ ACIP A G+D+ G+A TGSGKT AF LP
Sbjct: 135 NSFMELNLSRPLIRACEALGYAKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPT 193
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL Y PK +R LI+TP RELA+QV ++ +A+ +
Sbjct: 194 LERLL-------------------YRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTD 234
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+S ++QE L++ P+VVV TPGR+ + + V+L L+ +LDEADR
Sbjct: 235 IRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMS--VDLDDLAVLILDEADR 292
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++E G E++ ++ + P K+RQT++FSAT+ +
Sbjct: 293 LLELGFSAEIRELVRLCP------------------------KRRQTMLFSATMTEEVNE 328
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
KL + +TL+E +V L M +E +
Sbjct: 329 LIKLSLTKPLRLSADPATKRPKTLTEE--------VVRLRRM--------------REVN 366
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++A L + S + IVF + A + L + G LH + Q RL
Sbjct: 367 QEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRL 420
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 167/367 (45%), Gaps = 70/367 (19%)
Query: 164 LVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETG 223
++A S ++ + L ++K++ L F PTPIQ A IP GKDV+G A TG
Sbjct: 203 FASDAPSSDTHSSFLTMNLSRPVLKALTTLGFNTPTPIQAATIPVGL-LGKDVVGNAVTG 261
Query: 224 SGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDH 283
SGKT AF +P+++RLL DKG++A R LI+ PTRELA+Q +
Sbjct: 262 SGKTAAFIIPMIERLL---------YRDKGKKA------AATRCLILVPTRELAVQCYEV 306
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
K + +++ IVGG+S + QE L+ARP+VV+ TPGRL + + L L
Sbjct: 307 GKKLGTHTDIQFCLIVGGLSLKSQEVALRARPDVVIATPGRLIDHLRNSPSFT--LDALD 364
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRM+ +G EL II Q+C T RQT++FS
Sbjct: 365 ILVLDEADRMLSDGFADELTEII-----------------QSCPT-------SRQTMLFS 400
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT+ S D K+ S+N + +R+ R L +
Sbjct: 401 ATMTDSVDELVKM---------SLNKPVRLFVDPKRSTARG----------------LVQ 435
Query: 464 SFIEC---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
F+ KE D+ A L + + ++F S + + +LG+ LH +
Sbjct: 436 EFVRVRAGKESDRSALLVALCKRTFKSGVLIFFRSKKLAHQVRIMFSLLGMSCEELHGDL 495
Query: 521 QQRARLK 527
Q RLK
Sbjct: 496 SQEQRLK 502
>gi|357627854|gb|EHJ77400.1| hypothetical protein KGM_01171 [Danaus plexippus]
Length = 473
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 167/350 (47%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + +L ++ L++K P+ IQK IP A QGKD+IG AETGSGKT AF LPI+Q
Sbjct: 39 FQELGVVDVLCEACAELKWKHPSKIQKEAIPVAL-QGKDIIGLAETGSGKTGAFALPILQ 97
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE P+ + ALI+TPTRELA Q+++ + + I V+
Sbjct: 98 ALLEN-------------------PQRYF-ALILTPTRELAFQISEQFEALGASIGVKCA 137
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q +L +P +++ TPGRL + + + L L + V+DEADR++
Sbjct: 138 VIVGGMDMVAQALILSKKPHIIIATPGRLVDHLENTKGF--NLKALKYLVMDEADRILNM 195
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P ++R+T +FSAT+ +KL
Sbjct: 196 DFEVEVDKILRVIP------------------------RERRTYLFSATMTKKV---QKL 228
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL+ V +T+ KL++ +I + KD Y
Sbjct: 229 QRASLQDPVKVEVSTKYQTV----------------------EKLQQYYIFIPVKFKDVY 266
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L +IL+ IVF ++ A ++ LL+ LG+ LH QM Q+ RL
Sbjct: 267 LVHILNELAGNSFIVFVSTCAGALRVALLLRALGVGAVPLHGQMSQQKRL 316
>gi|350630756|gb|EHA19128.1| hypothetical protein ASPNIDRAFT_54204 [Aspergillus niger ATCC 1015]
Length = 467
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 165/350 (47%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L ++ + +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LPI+Q
Sbjct: 50 FKELGIIEQLCEACETMGYKAPTPIQRESIPLAL-QGRDLIGLAETGSGKTAAFALPILQ 108
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E+ + L++ PTRELA Q++ + + + VR
Sbjct: 109 ALMEKPQP--------------------FFGLVLAPTRELAYQISKSFESLGASMGVRSC 148
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q L +P ++V TPGRL + + + L L + V+DEADR+++
Sbjct: 149 VIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGF--SLRNLKYLVMDEADRLLDM 206
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
L I+ +LP ++R+T +FSAT++
Sbjct: 207 DFGPLLDKILKVLP------------------------RERRTFLFSATMS--------- 233
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +E+L +RA + + + T+ + L +S++ ++ KD Y
Sbjct: 234 --------------SKVESL-QRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLY 278
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+L+ TI+F ++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 279 LVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARL 328
>gi|406934671|gb|EKD68890.1| hypothetical protein ACD_47C00384G0003, partial [uncultured
bacterium]
Length = 637
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 170/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + + ++ + F+E +PIQ IP G+D+IG A+TG+GKT AF +PI++
Sbjct: 6 FTELNISEKIQRAAADMGFEEASPIQAETIPILL-AGRDLIGQAQTGTGKTAAFAIPILE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
++ E + L+AL++ PTREL +QVT+ + + K N+ +
Sbjct: 65 KIDHETK--------------------ELQALVLCPTRELVIQVTEEFRRLTKYFFNLAI 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG ++Q LK +P++VVGTPGRL + M + ++L L F VLDEAD M++
Sbjct: 105 VPVYGGQEIDRQIDALKRKPQIVVGTPGRLMDHMR---RATIKLDKLRFVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G ++++I+ P +RQT++FSAT+
Sbjct: 162 MGFREDMETILKDTPA------------------------ERQTIMFSATMP-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
I L+++ + N A +D++ + A K+E+ + E E+ K
Sbjct: 190 ---------------EDIAQLTKK--FQKNPARIDVSCHKMNAPKIEQFYYELLEKSKPE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +G +VFC + + + +LK G LH + QR R K+ S
Sbjct: 233 ALARLIDFYGVKLALVFCNTKMRVDELVEVLKTRGYLAEALHGDLNQRMRDKVMS 287
>gi|358373394|dbj|GAA89992.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 471
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 165/350 (47%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L ++ + +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LPI+Q
Sbjct: 54 FKELGIIEQLCEACETMGYKAPTPIQRESIPLAL-QGRDLIGLAETGSGKTAAFALPILQ 112
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E+ + LI+ PTRELA Q++ + + + VR
Sbjct: 113 ALMEKPQP--------------------FFGLILAPTRELAYQISKSFESLGASLGVRSC 152
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q L +P ++V TPGRL + + + L L + V+DEADR+++
Sbjct: 153 VIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGF--SLRNLKYLVMDEADRLLDM 210
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
L I+ +LP ++R+T +FSAT++
Sbjct: 211 DFGPLLDKILKVLP------------------------RERRTFLFSATMS--------- 237
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +E+L +RA + + + T+ + L +S++ ++ KD Y
Sbjct: 238 --------------SKVESL-QRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLY 282
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+L+ TI+F ++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 283 LVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARL 332
>gi|357618886|gb|EHJ71689.1| hypothetical protein KGM_12880 [Danaus plexippus]
Length = 533
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 74/360 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L+ + L K PTPIQK CIP G+D IGAA+TGSGKT AF LPI+Q
Sbjct: 9 FEELGVKRWLINQLITLGIKTPTPIQKGCIPNIL-SGQDCIGAAKTGSGKTFAFALPILQ 67
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L E+ P G + AL++TPT ELA Q+ D + + + +RV
Sbjct: 68 NLAED-------------------PYG-IFALVLTPTHELAYQIADQFLILGQPLKLRVC 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG ++ L RP +VV PGRL + +SG + L + + VLDEADR+
Sbjct: 108 IVTGGSDQLEESLKLAKRPHIVVAMPGRLADHISGCDTF--SLKKIKYLVLDEADRLFSE 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+L++I + LP +KRQ L+FSATI + D +
Sbjct: 166 SFTGDLETIFEALP------------------------QKRQNLLFSATI--TEDVK--- 196
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ V LN + N++ T+ + + L++ ++ C +D Y
Sbjct: 197 -------ESKVLSLN-----------KDNLSTWCDTDTTLTVSTLDQRYVVCPAYARDVY 238
Query: 477 LYYILSVHGQG----RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L L + +G IVF + + +S +L +G+D LH M+Q+ R+ +Q
Sbjct: 239 LVQTLRKYREGAPSSHVIVFTDTKKECQVLSMMLADIGMDNVCLHGFMRQKERVSALAQF 298
>gi|240274680|gb|EER38196.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H143]
Length = 828
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 161/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 305 SFQAFSLSRPILRGLTFVGFTTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIIPIL 363
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R +I+ PTRELA+Q + +A ++
Sbjct: 364 ERLL-------------------YRPRKVPTSRVVILMPTRELAVQCYNVATKLATFTDI 404
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 405 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 462
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+
Sbjct: 463 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMT------ 492
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIEC---K 469
N+++ L R G+ V + VD V L + F+ +
Sbjct: 493 -----------------NNVDKLI-RVGLNRPVRLMVDAKKQTV--GTLIQEFVRLRPGR 532
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
EE + YL + + R IVF S + + +LG+ V LH M Q R+K
Sbjct: 533 EEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVTELHGSMSQEQRIK 590
>gi|19705271|ref|NP_602766.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713234|gb|AAL94065.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 528
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKILKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|421145364|ref|ZP_15605243.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488237|gb|EJG09113.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 528
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFIEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|312898631|ref|ZP_07758021.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
gi|310620550|gb|EFQ04120.1| DEAD/DEAH box helicase [Megasphaera micronuciformis F0359]
Length = 522
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 174/359 (48%), Gaps = 71/359 (19%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ + L++ +++ ++ + F+EPTPIQ+ IP A +G D+IG A+TG+GKT A+G+P
Sbjct: 6 LEKFKNLQISDVIINALNDMGFEEPTPIQEGSIPVAL-EGHDMIGQAQTGTGKTAAYGIP 64
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+++++L AA APK L+++I++PTRELA+QV + + +A+ V
Sbjct: 65 VLEKIL-----AAG------------APK-ELQSVILSPTRELAIQVAEEINHLAQYTPV 106
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ +PI GG E+Q R L+ P+++V TPGRL + M G V+L ++S VLDEAD M
Sbjct: 107 QALPIYGGQDMERQLRRLRKSPQIIVATPGRLIDHMKRGT---VKLSSISTIVLDEADEM 163
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ G ++ I+ P T RQTL+FSAT+
Sbjct: 164 LNMGFIDDINLIMSATPET------------------------RQTLLFSATMPAPI--- 196
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+KL LK Q + M+A +DL +E+S+IE + K
Sbjct: 197 QKLAETFLKDPQIIR-------------MKAKEVTIDL---------VEQSYIEVADRQK 234
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + I+F + + +S LK G +H + Q R + Q
Sbjct: 235 FDVLCRLLDLQEPDLAIIFVRTKRRVDELSEGLKKRGYSAEGIHGDLTQAKRDSVIRQF 293
>gi|388567718|ref|ZP_10154148.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
gi|388265047|gb|EIK90607.1| DEAD/DEAH box helicase domain protein [Hydrogenophaga sp. PBC]
Length = 482
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 166/352 (47%), Gaps = 65/352 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+++EL L P L K++ + ++ TPIQ IP G+DV+GAA+TG+GKT AF LP++
Sbjct: 4 SFSELNLAPALAKAVAEMGYETMTPIQAQAIPQVL-TGRDVMGAAQTGTGKTAAFSLPLL 62
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
QRLL K E A + +RAL++ PTRELA QV + +K AK +R
Sbjct: 63 QRLL------------KHENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTQLRS 110
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GGM + Q LK EV+V TPGRL + + K+ V L+ + + VLDEADRM++
Sbjct: 111 TVVFGGMDMKPQTLELKKGVEVLVATPGRLLDHIEA--KNCV-LNQVEYVVLDEADRMLD 167
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ I+ LP K+R TL+FSAT + K+
Sbjct: 168 IGFLPDLQRILSYLP------------------------KQRTTLLFSATFSPEI---KR 200
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L + L+ +V S T A+ +E+ F ++DK
Sbjct: 201 LANSYLQDPITVEVARSNAT----------------------ASTVEQHFYRVDDDDKRG 238
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L IL G + VF S ++ L+ G++ LH Q RLK
Sbjct: 239 TLRQILRDRGLKQAFVFVNSKLGCARLARSLERDGLNTAALHGDKSQDERLK 290
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 181/355 (50%), Gaps = 51/355 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+E L ++ I L +K+PTPIQ+ IP Q +D+IG AETGSGKTLAF LP++
Sbjct: 362 WSECNLPTAILDVIKELGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLAFLLPLLV 420
Query: 237 RL-----LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
+ +E +E A D+G A+I+ PTRELA Q+ + AK +
Sbjct: 421 WITSLPKIERQEDA-----DQGP-----------YAIIMAPTRELAQQIDEETTKFAKML 464
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
++R V ++GG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++ VLDEAD
Sbjct: 465 DIRSVAVIGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LSRCTYIVLDEAD 521
Query: 352 RMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
RMI+ G E+Q I+D +P+TN + +E + + + + K RQT++F+AT+
Sbjct: 522 RMIDMGFEGEVQKILDYMPVTNQKPDTDDAEDEEKLLANFASKHKYRQTVMFTATMP--- 578
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
++E L+ R+ +R AIV + ++ ++E+ E
Sbjct: 579 --------------------PAVERLA-RSYLR-RPAIVYIGSVGKPVERVEQVVHIVTE 616
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+K L +L+ + I+F ++ L+ +G + TLH Q R
Sbjct: 617 SEKRKKLVELLNRGVEPPVIIFVNQKKGADVLAKGLERMGFNACTLHGGKGQEQR 671
>gi|261418549|ref|YP_003252231.1| DEAD/DEAH box helicase [Geobacillus sp. Y412MC61]
gi|297528577|ref|YP_003669852.1| DEAD/DEAH box helicase [Geobacillus sp. C56-T3]
gi|319765363|ref|YP_004130864.1| DEAD/DEAH box helicase [Geobacillus sp. Y412MC52]
gi|448236523|ref|YP_007400581.1| DEAD-box ATP-dependent RNA helicase [Geobacillus sp. GHH01]
gi|261375006|gb|ACX77749.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y412MC61]
gi|297251829|gb|ADI25275.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. C56-T3]
gi|317110229|gb|ADU92721.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. Y412MC52]
gi|445205365|gb|AGE20830.1| DEAD-box ATP-dependent RNA helicase [Geobacillus sp. GHH01]
Length = 467
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 167/356 (46%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L +MK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ G ++AL++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV--------------------DVKNGAIQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG E+Q R LK P V+VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILSHVP------------------------AERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V +++ ++E E+ K
Sbjct: 187 --------------DPIRRIAERFMNEPELVKVKAKEMTV--PNIQQYYLEVHEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 208/461 (45%), Gaps = 102/461 (22%)
Query: 104 DSGDGDG---------------------DGDE----------DGSGVQKQEEKNLKNETG 132
+ DGD D D+ D S + K EE +L+ ET
Sbjct: 16 EGSDGDEEDEEEEEEVVMEEEKLANFQFDDDDALNELAPKGWDVSDMVK-EEDDLQEETQ 74
Query: 133 KKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEI-STEFDAWNELRLHPLLMKSIY 191
+ KK++ ++ + + + + E E ++A + S E ++ EL L L+K++
Sbjct: 75 TEASKKQEEEEKERLAFQRRM-----EKEREYFDDAPVQSAETSSFQELHLSRPLLKAVS 129
Query: 192 RLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
L F +PT IQ IP A QGKDV ++ TGSGKT AF LPI++RLL
Sbjct: 130 SLGFIKPTVIQSMVIPVAL-QGKDVCASSRTGSGKTAAFALPILERLL------------ 176
Query: 252 KGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQER 309
Y P+ R L++TPTRELA+Q ++ +A ++R ++GG+ + QE
Sbjct: 177 -------YRPRRVAATRVLVLTPTRELAVQAHAMMEKLAAFTDIRCYIVIGGVKNQLQET 229
Query: 310 LLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 369
L+ +P+VVV TPGR+ + + + L VLDEADR++E G E+Q ++ M
Sbjct: 230 ELRKKPDVVVATPGRMIDHLRNAPG--IGFEALEILVLDEADRLLEMGFTEEVQELVKMC 287
Query: 370 PMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG 429
P ++RQT++FSAT+ D KL SL+ V
Sbjct: 288 P------------------------QQRQTMLFSATMTHDVD---KLAAFSLRRPVRVTA 320
Query: 430 LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK---EEDKDAYLYYILSVHGQ 486
SI T E G VA+ + L + F+ + E+D++A L + +
Sbjct: 321 DGSIRT-DETQGTLNKVAV---------PSSLLQEFVRIRKEHEKDREAILLCLCTRTFH 370
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
RTIVFC + + +LG+ V LH + Q RL+
Sbjct: 371 KRTIVFCREKRRAHRLRIIFGLLGLRVEELHGNLTQAQRLE 411
>gi|443893885|dbj|GAC71341.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 562
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 181/391 (46%), Gaps = 80/391 (20%)
Query: 152 AVSNGPDDAEEELVNEAEISTEFD-----AWNELRLHPLLMKSIYRLQFKEPTPIQKACI 206
A + PD+AE++ E +++T + + +L + P ++++ + F+ PTPIQ I
Sbjct: 90 ATAAAPDEAEQD---EKKVATLAEDGKKVTFADLGVIPQIIEACTNMGFQHPTPIQVKAI 146
Query: 207 PAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLR 266
P A Q +DVIG A+TGSGKT AF +PI+Q L + PK
Sbjct: 147 PEAL-QARDVIGLAQTGSGKTAAFTIPILQALWDN-------------------PKPFF- 185
Query: 267 ALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLW 326
A ++ PTRELA Q++ ++ + I VR IVGGM Q L RP V+V TPGRL
Sbjct: 186 ACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQ 245
Query: 327 ELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+ + + L L + V+DEADR+++ + IID L
Sbjct: 246 DHLENTKG--FSLRGLQYLVMDEADRLLD----MDFGPIIDKL----------------- 282
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANV 446
+ S+ R++R T++FSAT+ KL+ SLK N
Sbjct: 283 --LQSIPRERR-TMLFSATMTTKV---AKLQRASLK----------------------NP 314
Query: 447 AIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL 506
V++ + L++ ++ KD YL ++ + IVF ++ + +S LL
Sbjct: 315 VRVEVDTKYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILL 374
Query: 507 KILGIDVWTLHAQMQQRARLKLFSQMITWIR 537
++LG LH Q+ Q+ARL ++ T R
Sbjct: 375 RLLGFPAIPLHGQLSQQARLGALNKFKTGGR 405
>gi|315645365|ref|ZP_07898490.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
gi|315279407|gb|EFU42713.1| DEAD/DEAH box helicase domain protein [Paenibacillus vortex V453]
Length = 506
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 131/230 (56%), Gaps = 42/230 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + P+++K++ + +KEPTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 19 FQDLNISPVILKALAKENYKEPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 77
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L E+ K +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 78 LL--------------NEQPPKPGMARRIRALVLSPTRELALQISDNVKAYSQFTKLRST 123
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+S + QER L+ ++++ TPGRL +LM+ + ++L + VLDEADRM++
Sbjct: 124 AIVGGVSQKTQERALQQGADILIATPGRLLDLMN---QKRIDLQHVEILVLDEADRMLDM 180
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
G +++ II +P K+QTL FSAT+
Sbjct: 181 GFIHDVKRIISKMP------------------------SKKQTLFFSATM 206
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 166/368 (45%), Gaps = 76/368 (20%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S E ++ + L ++KS+ L F PTPIQ A IP A GKDV+G A TGSGKT AF
Sbjct: 204 SEEHSSFLSMNLSRPIIKSLTTLGFNTPTPIQAATIPVALL-GKDVVGNAVTGSGKTAAF 262
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
+P+++RL M D+G++A R L++ PTRELA+Q + +A
Sbjct: 263 IIPMLERL---------MYRDRGKKA------AATRCLVLVPTRELAVQCFEVGTKLAAH 307
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
++R +VGG+S + QE L+ RP+VV+ TPGRL + + +E L VLDEA
Sbjct: 308 TDIRSCLVVGGLSLKAQEASLRTRPDVVIATPGRLIDHLRNSPTFTLE--ALDILVLDEA 365
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DRM+E+G EL II P + RQT++FSAT+
Sbjct: 366 DRMLEDGFSDELTEIIKSCPTS------------------------RQTMLFSATM---- 397
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI---VDLTNMCVLANKLEESFIE 467
+T+ E M N + VD A L + F+
Sbjct: 398 ----------------------TDTVDELVRMSLNKPVRLFVDPKRTT--ARGLVQEFVR 433
Query: 468 C---KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
KE ++ A L + + ++I+F S + + +LG+ LH + Q
Sbjct: 434 VRAGKEAERSALLAALCKRTFRTKSIIFFRSKKLAHQMRIVFSLLGMKSDELHGDLSQEQ 493
Query: 525 RLKLFSQM 532
RLK Q
Sbjct: 494 RLKALQQF 501
>gi|421526210|ref|ZP_15972819.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
gi|402257969|gb|EJU08442.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
Length = 529
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + IVFC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIVFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|170090862|ref|XP_001876653.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648146|gb|EDR12389.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 170/376 (45%), Gaps = 79/376 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L ++ + K PT +Q ACIP G D IG A+TGSGKT+AF LPI+QRLL +
Sbjct: 11 LQSALTSMSIKTPTEVQAACIPPLL-AGTDCIGNAKTGSGKTIAFALPILQRLLAD---- 65
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
P G + AL++TPTRELA Q+++ + +N+R IVGGM
Sbjct: 66 ---------------PYG-IYALVLTPTRELAFQISEQFVVLGASLNLRTAVIVGGMDMM 109
Query: 306 KQERLLKARPEVVVGTPGRLWELM--SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQ 363
Q L RP +V+ TPGRL + + S GE +L + F VLDEADR++ EL
Sbjct: 110 AQALELGNRPHIVIATPGRLVDHLRSSSGEW---DLSRVRFLVLDEADRLLTRTFSPELS 166
Query: 364 SIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKS 423
+ ++LP + RQT +F+AT+ S + K
Sbjct: 167 HLFNVLP------------------------QDRQTCLFTATLTPSIESLADATARPGKQ 202
Query: 424 KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL-- 481
K V+ +N ER R + L++ +I ++ YLYY+L
Sbjct: 203 KPFVHRMN------ERQVRRIET-----------VSTLKQHYILVPSHVRETYLYYLLRN 245
Query: 482 ------SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR---LKLF-SQ 531
+ TI+FC +++ +LK L I LH+++ QR R L LF +
Sbjct: 246 PPDDDDELEQPPPTIIFCARPRTAAYLTLVLKSLSIRSTALHSRLTQRERLSSLSLFRAS 305
Query: 532 MITWIRKRPKGDRGKD 547
++ + G RG D
Sbjct: 306 VVPVLVSTDVGSRGLD 321
>gi|449279156|gb|EMC86802.1| putative ATP-dependent RNA helicase DDX47, partial [Columba livia]
Length = 453
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 169/372 (45%), Gaps = 72/372 (19%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
NG E V E ++ +L + +L ++ +L +K PT IQ IP A QG+
Sbjct: 6 NGQTAEPEAAVEPEAAGEESRSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVAL-QGR 64
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+Q LLE ++ L AL++TPTR
Sbjct: 65 DIIGLAETGSGKTGAFALPILQALLETPQR--------------------LFALVLTPTR 104
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V IVGG+ Q L +P V++ TPGRL + + +
Sbjct: 105 ELAFQISEQFEALGSSIGVHTTVIVGGIDAMSQSLALAKKPHVIIATPGRLVDHLENTKG 164
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 165 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 198
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 199 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 237
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD+YL +IL+ ++FC++ + + LL+ LG
Sbjct: 238 ----EKLQQYYIFIPSKFKDSYLVHILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 293
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 294 PLHGQMSQNKRL 305
>gi|365759503|gb|EHN01286.1| Drs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 737
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 183/389 (47%), Gaps = 83/389 (21%)
Query: 158 DDAEEELVNEAEISTE--------FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
DD+EE + TE +D +N L L ++K + L + P+PIQ A IP A
Sbjct: 191 DDSEEAKADFYAPETEGNEAKKQMYDNFNSLSLSRPVLKGLANLGYVMPSPIQSATIPIA 250
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
GKD+I A TGSGKT AF +PI++RLL + K A R ++
Sbjct: 251 L-LGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIAST-----------------RVIV 292
Query: 270 ITPTRELALQVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
+ PTRELALQV D K +A+ + ++ VGG++ +QE++LK+RP++V+ TPGR +
Sbjct: 293 LLPTRELALQVADVGKQIARFVPSITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDH 352
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ V+ ++ V+DEADRM+E G EL I+ +LP +
Sbjct: 353 IRNSASFNVD--SVEILVMDEADRMLEEGFQDELNEIMGLLPSS---------------- 394
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
RQ L+FSAT + SK + S+ +LS + +R +
Sbjct: 395 --------RQNLLFSAT---------------MNSK-----IKSLVSLSLKRPVRI---M 423
Query: 449 VDLTNMCVLANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHIS 503
+D A KL + F+ ++ D K A ++ + L Q R +VF + +
Sbjct: 424 IDPPKKA--ATKLTQEFVRIRKRDHLKPALIFNLIRKLDPMAQKRIVVFVARKESAHRLR 481
Query: 504 SLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +LG+ V LH + Q RL S+
Sbjct: 482 IIMGLLGMSVGELHGSLTQEQRLDSVSKF 510
>gi|315043240|ref|XP_003170996.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
gi|311344785|gb|EFR03988.1| ATP-dependent RNA helicase drs1 [Arthroderma gypseum CBS 118893]
Length = 814
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 164/373 (43%), Gaps = 78/373 (20%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EE++ S ++ L L +++ + + F PTPIQK IP A GKDV+G A
Sbjct: 285 EEQVAEPKSASGAPASFQNLSLSRPILRGLASVGFSAPTPIQKKTIPVALL-GKDVVGGA 343
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELAL 278
TGSGKT AF +PI++RLL Y P+ R I+ PTRELA+
Sbjct: 344 VTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTRELAV 384
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q + +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 385 QCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD 444
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
TL VLDEADRM+E+G EL I+ +P K RQ
Sbjct: 445 --TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------KSRQ 478
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVL 457
T++FSAT+ NS++ L R G+ V + VD V
Sbjct: 479 TMLFSATMT-----------------------NSVDKLI-RVGLNKPVRLMVDSKKQTV- 513
Query: 458 ANKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
L + F+ + E+ + YL ++ R IVF + + ++G+
Sbjct: 514 -GTLVQEFVRLRPGREDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIIFGLMGLKAA 572
Query: 515 TLHAQMQQRARLK 527
LH M Q R+K
Sbjct: 573 ELHGSMSQEQRIK 585
>gi|390351278|ref|XP_786173.3| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Strongylocentrotus purpuratus]
Length = 428
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 161/342 (47%), Gaps = 72/342 (21%)
Query: 185 LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK 244
+L ++ +L++K P+ IQ +P A QGKDVIG AETGSGKT AF LPI+Q LLE ++
Sbjct: 9 VLCEACDKLKWKTPSKIQTEALPVAL-QGKDVIGLAETGSGKTGAFALPILQALLETPQR 67
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMST 304
L AL++TPTRELA Q+ + + + I V V IVGG+
Sbjct: 68 --------------------LFALVLTPTRELAYQIAEQFEALGSTIGVSCVVIVGGIDM 107
Query: 305 EKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
Q L +P V++ TPGRL + + + L L + V+DEADR++ E+
Sbjct: 108 MTQALQLAKKPHVMIATPGRLVDHLENTKGF--NLRGLKYLVMDEADRILNMDFEAEIDK 165
Query: 365 IIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK 424
I+ ++P K+R+T ++SAT+ KL+ SL+
Sbjct: 166 ILKVIP------------------------KQRRTYLYSATMTKKV---AKLQRASLQDP 198
Query: 425 QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH 484
V +T+S KL++S+I + KD YL IL+
Sbjct: 199 VKVEVSTKYQTVS----------------------KLQQSYIFIPAKYKDCYLVSILNEF 236
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+VFC++ + ++ LL+ LG+ LH Q+ Q RL
Sbjct: 237 AGNSFMVFCSTCNNTQRVALLLRNLGLTAIPLHGQLSQSKRL 278
>gi|198474199|ref|XP_001356589.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
gi|198138291|gb|EAL33653.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 41/357 (11%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +WNE P ++ I ++ +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 395 IPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 453
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + + + LED + P A+I+ PTRELA Q+ + +
Sbjct: 454 FLIPLLSWI--QSLPKIERLEDVDQ-----GPY----AIIMAPTRELAQQIEEETIKFGQ 502
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 503 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 559
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIAL 408
ADRMI+ G ++Q I++ +P+TN + + +N + + +KK RQT++F+AT+
Sbjct: 560 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATMPP 619
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + +L L+ +V + S+ +ER E+
Sbjct: 620 AVE---RLARSYLRRPSTVY-IGSMGKPTERT---------------------EQIVYMM 654
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E DK L ILS I+F ++ L+ LG + TLH Q R
Sbjct: 655 GENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 711
>gi|392970003|ref|ZP_10335412.1| probable DEAD-box ATP-dependent RNA helicase [Staphylococcus
equorum subsp. equorum Mu2]
gi|403046049|ref|ZP_10901524.1| ATP-dependent RNA helicase [Staphylococcus sp. OJ82]
gi|392511931|emb|CCI58617.1| probable DEAD-box ATP-dependent RNA helicase [Staphylococcus
equorum subsp. equorum Mu2]
gi|402764211|gb|EJX18298.1| ATP-dependent RNA helicase [Staphylococcus sp. OJ82]
Length = 507
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 175/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L + +++ + F + TPIQK IP A +GKDV+G A+TG+GKT AFG+P++
Sbjct: 4 FKELGLSDKMAETLASMGFDDATPIQKESIPLAL-EGKDVLGQAQTGTGKTGAFGIPLV- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK A K +++LI+ PTRELA+QV + ++ AKG NV+VV
Sbjct: 62 --------------------EKVADKEGVQSLILAPTRELAMQVAESIREFAKGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKSLKKGPQIVVGTPGRVIDHLNRRTLKTNDVHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P + +RQT++FSAT+
Sbjct: 159 GFIDDMKFIMDKIPAS-----------------------QRQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+TL ++ M+ V IV N + ++EE + KE +K
Sbjct: 187 --------------KAIQTLVQQF-MKTPV-IVKTMNNEMSNPQIEEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNLLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|308068476|ref|YP_003870081.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus polymyxa
E681]
gi|305857755|gb|ADM69543.1| Probable RNA helicase exp9 (Exported protein 9) [Paenibacillus
polymyxa E681]
Length = 529
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 83/354 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E L P ++++I L F+E TPIQ IP A QG+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFDLEPKVIQAITELGFEEATPIQSQSIPIAL-QGRDMIGQAQTGTGKTAAFGIPLIN 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ EK +RALI+ PTRELA+QV + ++ +++ +R +
Sbjct: 63 KISRSDEK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPANIKRLAEQ 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K +H S+ KQ V A +++++IE E
Sbjct: 196 FLKNPEHVSVIPKQ------------------------------VSAPLIDQAYIEVPER 225
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L ++ + IVF + + ++ L+ G LH + Q R
Sbjct: 226 QKFEALSRLIDMESPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQR 279
>gi|241766543|ref|ZP_04764404.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
gi|241363218|gb|EER58791.1| DEAD/DEAH box helicase domain protein [Acidovorax delafieldii 2AN]
Length = 415
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 71/358 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++ L L P L+++ + F PTP+Q A IPA +G DV+G+A+TGSGKT AF LP++Q
Sbjct: 3 FSALGLSPALVQAATAMGFSAPTPVQSAAIPAVL-RGADVLGSAQTGSGKTAAFALPLLQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI--NVR 294
RL + + A + H+RALI+ PTRELA QV + ++ + +G+ V+
Sbjct: 62 RLQADAQNAPR----------------HVRALILVPTRELAAQVGEVIRSLGRGLPQPVK 105
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
V + GG+S Q L+ +VVV TPGRL +L+ E + + L ++ VLDEADR++
Sbjct: 106 VAVVFGGVSINPQMMGLRGGADVVVATPGRLLDLV---EHNALRLGSVEHLVLDEADRLL 162
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ G ELQ I+ +LP+ +RQ L+FSAT A
Sbjct: 163 DLGFAEELQRILQLLPV------------------------RRQNLLFSATFA------- 191
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+++ L+E GM V + + + + + +
Sbjct: 192 ----------------PAVQALAE--GMLHEPVRVTVDDAPANVPAIAQRAFAVDAQRRT 233
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +++ H R +VF + A H++ L GI H + Q AR ++ +
Sbjct: 234 QLLRHLVQEHQWSRVMVFVATQYAAEHVAEKLYKAGIFATPFHGGLSQGARTQVLQEF 291
>gi|340751823|ref|ZP_08688633.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
gi|229420786|gb|EEO35833.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
Length = 545
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 73/352 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ + EL L +K++ + +++PTPIQ IPA + KD+IG A+TG+GKT AF LP
Sbjct: 4 LEQFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 63
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I+ E + P ++A+++ PTRELALQV + + +A G +
Sbjct: 64 IL---------------------ENFEPSKVIQAIVLAPTRELALQVAEEMNSLAHGKKI 102
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R+ P+ GG S E Q R LK +++VGTPGR+ +LM E+ L++L L +F+LDEAD M
Sbjct: 103 RITPVYGGQSIEFQIRQLKKGTDIIVGTPGRVIDLM---ERKLIKLQDLKYFILDEADEM 159
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+ G +++ I L TN + ++ L FSAT+
Sbjct: 160 LNMGFVEDIEKI---LEATN---------------------EDKRMLFFSATMPNEI--- 192
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
K + N + E L+ ++A DLT+ + E E+DK
Sbjct: 193 ---------MKIAKNHMKDYEVLA----VKARELTTDLTDQI---------YFEVHEKDK 230
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + IVFC + + L G D LH + Q R
Sbjct: 231 FEALCRIIDLTRDFYGIVFCRTKNDANDLVGKLNDRGYDAEGLHGDISQNYR 282
>gi|456888324|gb|EMF99307.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. 200701203]
Length = 527
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPAIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE LE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLE--------LESK-----------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L+ + VLDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|257896496|ref|ZP_05676149.1| helicase [Enterococcus faecium Com12]
gi|257833061|gb|EEV59482.1| helicase [Enterococcus faecium Com12]
Length = 503
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 83/358 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L+KS+ R F+E TPIQ IP A GKDVIG A+TG+GKT AFGLP+++
Sbjct: 3 FKELELSPELLKSVERAGFEEATPIQAETIPLAL-VGKDVIGQAQTGTGKTAAFGLPMLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +R + L+ L+I PTRELA+Q + L + + VRV
Sbjct: 62 KIDPDRHE--------------------LQGLVIAPTRELAIQTQEELYRLGRDKKVRVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 102 AVYGGADIGRQIRGLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVQTLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++ II +P +RQTL+FSAT+ +
Sbjct: 159 GFLEDIEKIIFQVP------------------------DQRQTLLFSATMPPAIKNIGVK 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K H +K+K+ + A+ +++ ++ KE
Sbjct: 195 FMKSPHHVKIKAKE------------------------------MTADLIDQYYVRAKEY 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + + V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 225 EKFDIMTRLFDVQTPELTIVFGRTKRRVDELARGLEARGYRAEGIHGDLSQQKRMSVL 282
>gi|260584701|ref|ZP_05852447.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Granulicatella
elegans ATCC 700633]
gi|260157724|gb|EEW92794.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Granulicatella
elegans ATCC 700633]
Length = 509
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 170/359 (47%), Gaps = 85/359 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NEL L L++SI ++ F+E TPIQ IP A GKDVIG A+TG+GKT +FGLP++Q
Sbjct: 3 FNELGLDSALLESIEKMGFEEATPIQSQTIPLAL-AGKDVIGQAQTGTGKTASFGLPMLQ 61
Query: 237 RL-LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ L R+ ++ L+I PTRELA+Q + L + K + V
Sbjct: 62 KINLRNRK---------------------VQGLVIAPTRELAIQTQEELYRLGKDKKIHV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG +Q R LK +P +VVGTPGRL + +S + + L + VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDQPHIVVGTPGRLLDHIS---RKTLRLDNIETLVLDEADEMLN 157
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSA 410
G +++SII ++P + RQTL+FSAT+ +
Sbjct: 158 MGFLEDIESIIKLVP------------------------ENRQTLLFSATMPDDIKRIGV 193
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
F K+ +H +KS + + A +++ F++CK+
Sbjct: 194 QFMKEPEHVRIKSSE------------------------------MTATLIDQYFVKCKD 223
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + +L V TIVF + + ++ L++ G +H + Q+ R+ +
Sbjct: 224 FEKFDIMTRLLDVQTPELTIVFGRTKRRVDELARGLEMRGFRAEGIHGDLSQQKRMSVL 282
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 161/357 (45%), Gaps = 76/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ E L +++ + + F PTPIQ+ IP A GKD++G+A TGSGKT AF +PI+
Sbjct: 303 SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GKDIVGSAVTGSGKTAAFVVPIL 361
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL + P+ R I+ PTRELA+Q + +A ++
Sbjct: 362 ERLL-------------------FRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTDI 402
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 403 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 460
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+ S D
Sbjct: 461 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMTDSVD-- 494
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
KL R G+ V ++ + N ++E F+ + +
Sbjct: 495 -KLI---------------------RVGLNRPVRLMVDSKKNTSMNLIQE-FVRLRPGRE 531
Query: 474 DAYLYYILSVHGQ---GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
D L Y+L + + GR IVF + +LG+ LH M Q R++
Sbjct: 532 DKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIAFGLLGLKAAELHGSMSQEQRIR 588
>gi|34763211|ref|ZP_00144175.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256846171|ref|ZP_05551629.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
gi|27887121|gb|EAA24228.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256719730|gb|EEU33285.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
Length = 528
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|353234580|emb|CCA66604.1| related to ATP-dependent helicase involved in rRNA processing
[Piriformospora indica DSM 11827]
Length = 571
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 207/476 (43%), Gaps = 132/476 (27%)
Query: 103 EDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEE----SVAVSNGPD 158
EDS D EDG + E ++ +E+ +++ K ++ VEE S + + P
Sbjct: 30 EDSSDS-----EDGRA--EPENRSDDSESITEEQINKVARQFSPVEEENEKSARLGSRPS 82
Query: 159 DAEEELVNEAEIST---EFDAWN--ELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
A + +V + I + E DA N EL +HP L+ S+ + + PTP+Q ACIPA QG
Sbjct: 83 KAGKGVVTQRAIPSAEKEEDAVNFAELGVHPDLVTSLANMSIRRPTPVQAACIPALL-QG 141
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
D IG A+TGSGKT+AF +PI+Q+L+++ P G + ALI+TPT
Sbjct: 142 LDCIGNAKTGSGKTVAFAIPILQQLMKD-------------------PYG-IYALILTPT 181
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM--SG 331
RELA Q+ D + NVR +VGGM Q L+ RP VVV TPGRL + + +
Sbjct: 182 RELAFQIADQFAILGGPFNVRTAIVVGGMDMIAQAIELENRPHVVVATPGRLVDHLNSTS 241
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSS 391
G +L VLDEADR++ EL ++ +LP
Sbjct: 242 GTWNLSR-------VLDEADRLLTPTFATELAALFQVLP--------------------- 273
Query: 392 LQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL 451
RQ +F+AT++ + + I + G ++ I +
Sbjct: 274 ---PDRQVSLFTATMS--------------------DKIEGIANAEPKPG-KSRPFIHRM 309
Query: 452 TNMCVLANKLEESFIECKEEDKDAYLYYILS------VH-----------GQGR------ 488
T+ L++ ++ ++ YLY++L VH Q R
Sbjct: 310 TDRIETVLTLKQYYLIVPSHVREVYLYHLLCNPPQSIVHLRRAPPEKSKPAQFRRKEKPK 369
Query: 489 ------------------TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
TI+FCT A+ +++ LK L I LH+++ QR RL
Sbjct: 370 MKKKQDSVEEDEIVQPPPTIIFCTRPKAVAYLTEFLKALSIRATPLHSRLTQRERL 425
>gi|340960548|gb|EGS21729.1| ATP-dependent rRNA helicase rrp3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 492
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 190/412 (46%), Gaps = 78/412 (18%)
Query: 118 GVQKQEEKNLKNETGKKKKKKKK---GKKIKTVEESVAVSNGPDDAEEELVNEAEISTEF 174
G++ LKN+ KK ++K+ K S A S D+ ++ N+A T
Sbjct: 14 GLKDASAPTLKNDVKSKKTEEKQLSSQPKQPPAPSSEADSETIDNGSKQGNNDAAPKT-- 71
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+ +L + L ++ RL +K PTPIQ+ IP A Q +D+IG AETGSGKT AF LPI
Sbjct: 72 --FADLGIVESLCEACERLGYKRPTPIQEQAIPLAL-QNRDLIGIAETGSGKTAAFALPI 128
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR 294
+Q LL++ + L AL++ PTRELA Q+ + + I++R
Sbjct: 129 LQALLDKPQP--------------------LFALVLAPTRELAAQIAQAFEALGSMISLR 168
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
I+GG+ +Q L +P V+V TPGRL + + + L L + V+DEADR++
Sbjct: 169 CALILGGLDMVQQAIALGKKPHVIVATPGRLLDHLEKTKG--FSLRNLKYLVMDEADRLL 226
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ L+ I+ LP ++R+T +FSAT++
Sbjct: 227 DMDFGPILEKILKFLP------------------------RERRTFLFSATMS------- 255
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+ +E+L +RA +R + + T+ + L + +I KD
Sbjct: 256 ----------------SKVESL-QRASLRDPLKVSISTSKYQTVSTLVQHYIFIPHIHKD 298
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+++ I+F ++ + I+ LL+ LG+ LH + Q ARL
Sbjct: 299 TYLIYLVNEFAGKTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARL 350
>gi|224135589|ref|XP_002322111.1| predicted protein [Populus trichocarpa]
gi|222869107|gb|EEF06238.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 173/360 (48%), Gaps = 52/360 (14%)
Query: 168 AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKT 227
++I +W E +L L+K++ R+ +K+P+PIQ A IP Q +DVIG AETGSGKT
Sbjct: 283 SKIPRPMRSWAESKLSSELLKAVERVVYKKPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 341
Query: 228 LAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV 287
AF LP++ + L EE E P A+++ PTRELA Q+ D
Sbjct: 342 CAFVLPMLTYI--------SRLPPMSEENEAEGPY----AVVMAPTRELAQQIEDETVKF 389
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A + ++VV IVGG S E+Q ++ EVV+ TPGRL + + E+ L+ ++ VL
Sbjct: 390 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVL 446
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK--RQTLVFSAT 405
DEADRMI+ G ++ ++D +P +N + + E+ L KK R T +FSAT
Sbjct: 447 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 497
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
+ ++E L+ R +R N +V + + + +
Sbjct: 498 MP-----------------------PAVERLA-RKYLR-NPVVVTIGTAGKATDLISQHV 532
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
I KE +K + L+ +L G IVF + ++ L G V TLH Q R
Sbjct: 533 IMTKESEKSSRLHRLLDELGDKTAIVFVNTKKNADMVAKNLDKHGYRVTTLHGGKSQEQR 592
>gi|171656|gb|AAA34666.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
Length = 722
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 75/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
++ +N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +P
Sbjct: 200 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALL-GKDIIAGAVTGSGKTAAFMIP 258
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN- 292
I++RLL + K A R +++ PTRELA+QV D K +A+ ++
Sbjct: 259 IIERLLYKPAKIAST-----------------RVIVLLPTRELAIQVADVGKQIARFVSG 301
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+ VGG++ +QE++LK+RP++V+ TPGR + + V+ ++ V+DEADR
Sbjct: 302 ITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADR 359
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 360 MLEEGFQDELNEIMGLLP----SN--------------------RQNLLFSAT------- 388
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+ SK + S+ +LS + +R ++D A KL + F+ ++ D
Sbjct: 389 --------MNSK-----IKSLVSLSLKKPVRI---MIDPPKKA--ATKLTQEFVRIRKRD 430
Query: 473 --KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 431 HLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRL 489
>gi|237742838|ref|ZP_04573319.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
gi|229430486|gb|EEO40698.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
Length = 528
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|296328514|ref|ZP_06871033.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154323|gb|EFG95122.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 528
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|358467620|ref|ZP_09177312.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357067539|gb|EHI77649.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 529
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 72/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI++
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPIIE 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ E E H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 70 KF---------------ETTEH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 109
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 110 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 166
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN ++ L FSAT+ +
Sbjct: 167 GFVEDIEKI---LTFTNDD---------------------KRMLFFSATMPTEI-----M 197
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + K+ E +++ DLT E+ + E E DK
Sbjct: 198 KIAKIHMKE-----------YEVLAVKSRELTTDLT---------EQIYFEVNERDKFEA 237
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 238 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 286
>gi|359729283|ref|ZP_09267979.1| ATP-dependent RNA helicase [Leptospira weilii str. 2006001855]
Length = 535
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 28 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 86
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 87 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 126
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L + VLDEAD M++
Sbjct: 127 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLDDIKIVVLDEADEMLD 183
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 184 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 211
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 212 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 254
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 255 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 309
>gi|109095724|ref|XP_001086352.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 3
[Macaca mulatta]
Length = 455
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 173/373 (46%), Gaps = 76/373 (20%)
Query: 154 SNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
S+ P +A + ++ E E T + +L + +L ++ +L + +PT I IP A QG
Sbjct: 7 SDSPTEASQPVMEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKILIEAIPLAL-QG 61
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
+D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPT
Sbjct: 62 RDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPT 101
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 102 RELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTK 161
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L L + V+DEADR++ E+ I+ ++P
Sbjct: 162 GF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP----------------------- 196
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 -RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV----------------- 235
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 -----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTA 290
Query: 514 WTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 291 IPLHGQMSQSKRL 303
>gi|294658482|ref|XP_460822.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
gi|218511820|sp|Q6BLU9.2|PRP28_DEBHA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|202953164|emb|CAG89165.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
Length = 580
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 134/241 (55%), Gaps = 19/241 (7%)
Query: 168 AEISTEFDAWNELRLHPLLMKSIYR-LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGK 226
+I W E +L L+ + + L + PTPIQ+A IP A + G+D++G AETGSGK
Sbjct: 147 GDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALN-GRDIVGIAETGSGK 205
Query: 227 TLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKG 286
TLAF LP+ +L + +L + +E+ P G LI+ PTRELALQ+T K
Sbjct: 206 TLAFLLPLFSYILSV--DSNYLLYEHQQESNFNKPLG----LILAPTRELALQITKEAKL 259
Query: 287 VAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFV 346
+N+ VV I+GG E+ ++ +VV TPGRL + + E+ ++ L FF
Sbjct: 260 FGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSL---ERGIINLSNCYFFT 316
Query: 347 LDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+DEAD+MI+ G + LQSI++ LP SE+ + + KKR TL+F+ATI
Sbjct: 317 MDEADKMIDMGFEKSLQSILNYLP--------ASEKLETTIDGKIFNIKKRITLMFTATI 368
Query: 407 A 407
+
Sbjct: 369 S 369
>gi|418575592|ref|ZP_13139742.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325994|gb|EHY93122.1| putative ATP-dependent RNA helicase [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 487
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 167/338 (49%), Gaps = 73/338 (21%)
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
F E TPIQK IP A +GKDV+G A+TG+GKT AFG+P++
Sbjct: 3 FNEATPIQKESIPLAL-EGKDVLGQAQTGTGKTGAFGIPLI------------------- 42
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
EK A + +++LI+ PTRELA+QV + LK AKG N++VV + GGM ++Q + LK
Sbjct: 43 --EKVADQEGVQSLILAPTRELAMQVAESLKAFAKGQNIQVVTVFGGMPIDRQIKALKKG 100
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 374
P++VVGTPGR+ + ++ ++HTL +LDEAD M+ G +++ I+D +P
Sbjct: 101 PQIVVGTPGRVIDHLNRRTLKTNDIHTL---ILDEADEMMNMGFIDDMKFIMDKIP---- 153
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIE 434
+EQ RQT++FSAT+ +I+
Sbjct: 154 -----AEQ--------------RQTMLFSATMP-----------------------KAIQ 171
Query: 435 TLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCT 494
TL ++ M++ V IV N + ++EE + KE +K L VH IVF
Sbjct: 172 TLVQQF-MKSPV-IVKTMNNEMSDPQIEEYYTIVKELEKFDTFTSFLDVHQPELAIVFGR 229
Query: 495 SIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+ + ++S L G LH + Q RL++ +
Sbjct: 230 TKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 267
>gi|143454043|sp|Q0INC5.2|RH28_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|77555691|gb|ABA98487.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|125579336|gb|EAZ20482.1| hypothetical protein OsJ_36091 [Oryza sativa Japonica Group]
gi|215706455|dbj|BAG93311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 802
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 131/234 (55%), Gaps = 48/234 (20%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ EL L L+++ L +++PTPIQ ACIP A G+D+ G+A TGSGKT AF LP+
Sbjct: 194 NSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPV 252
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL + PK +R LI+TPTRELA QV ++ +A+ +
Sbjct: 253 LERLL-------------------FRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTD 293
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+ST+ QE L++ P++VV TPGR+ + + V L L+ +LDEADR
Sbjct: 294 IRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLS--VGLEDLAILILDEADR 351
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
++E G E+Q +I M P ++RQT++FSAT+
Sbjct: 352 LLELGFSAEIQELIRMCP------------------------RRRQTMLFSATM 381
>gi|401840824|gb|EJT43489.1| DRS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 758
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 183/389 (47%), Gaps = 83/389 (21%)
Query: 158 DDAEEELVNEAEISTE--------FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
DD+EE + TE +D +N L L ++K + L + P+PIQ A IP A
Sbjct: 212 DDSEEAKADFYAPETEGNEAKKQMYDNFNSLSLSRPVLKGLANLGYVTPSPIQSATIPIA 271
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
GKD+I A TGSGKT AF +PI++RLL + K A R ++
Sbjct: 272 L-LGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIAST-----------------RVIV 313
Query: 270 ITPTRELALQVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
+ PTRELALQV D K +A+ + ++ VGG++ +QE++LK+RP++V+ TPGR +
Sbjct: 314 LLPTRELALQVADVGKQIARFVPSITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDH 373
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ V+ ++ V+DEADRM+E G EL I+ +LP +
Sbjct: 374 IRNSASFNVD--SVEILVMDEADRMLEEGFQDELNEIMGLLPSS---------------- 415
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
RQ L+FSAT + SK + S+ +LS + +R +
Sbjct: 416 --------RQNLLFSAT---------------MNSK-----IKSLVSLSLKRPVRI---M 444
Query: 449 VDLTNMCVLANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHIS 503
+D A KL + F+ ++ D K A ++ + L Q R +VF + +
Sbjct: 445 IDPPKKA--ATKLTQEFVRIRKRDHLKPALIFNLIRKLDPMAQKRIVVFVARKESAHRLR 502
Query: 504 SLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ +LG+ V LH + Q RL S+
Sbjct: 503 IIMGLLGMSVGELHGSLTQEQRLDSVSKF 531
>gi|67517117|ref|XP_658442.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
gi|40746512|gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
Length = 1676
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 166/370 (44%), Gaps = 72/370 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EE+ +A ++ ++ E L +++ + + F PTPIQ+ IP A GKD++G+A
Sbjct: 776 EEKTDEDAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVAL-LGKDIVGSA 834
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
TGSGKT AF +PI++RLL K R I+ PTRELA+Q
Sbjct: 835 VTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTRELAVQC 877
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ +A ++ +VGG S +QE +LK RP+V++ TPGR + M V+
Sbjct: 878 YNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVD-- 935
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL VLDEADRM+E+G EL I+ +P K RQT+
Sbjct: 936 TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSRQTM 971
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ S D ++ GLN L + N A+
Sbjct: 972 LFSATMTDSVDKLIRV------------GLNRPVRLM--VDTKKNTAVT----------- 1006
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQ---GRTIVFCTSIAALRHISSLLKILGIDVWTLH 517
L + F+ + +D L Y+L + + GR IVF + + +LG+ LH
Sbjct: 1007 LVQEFVRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIVFGLLGLKAAELH 1066
Query: 518 AQMQQRARLK 527
M Q R+K
Sbjct: 1067 GSMSQEQRIK 1076
>gi|403286623|ref|XP_003934579.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Saimiri
boliviensis boliviensis]
Length = 547
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 172/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P + + +V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 100 DCPTETSQPVVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 154
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 155 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 194
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 195 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 254
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 255 --FNLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 288
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 289 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 327
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 328 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 383
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 384 PLHGQMSQSKRL 395
>gi|336419231|ref|ZP_08599497.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
11_3_2]
gi|336163922|gb|EGN66836.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
11_3_2]
Length = 528
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHMQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFIEDIEKI---LTFTN---------------------EDKRMLFFSATMPEEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + IVFC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIVFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|115488568|ref|NP_001066771.1| Os12g0481100 [Oryza sativa Japonica Group]
gi|113649278|dbj|BAF29790.1| Os12g0481100, partial [Oryza sativa Japonica Group]
Length = 832
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 131/234 (55%), Gaps = 48/234 (20%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ EL L L+++ L +++PTPIQ ACIP A G+D+ G+A TGSGKT AF LP+
Sbjct: 224 NSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPV 282
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL + PK +R LI+TPTRELA QV ++ +A+ +
Sbjct: 283 LERLL-------------------FRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTD 323
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+ST+ QE L++ P++VV TPGR+ + + V L L+ +LDEADR
Sbjct: 324 IRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLS--VGLEDLAILILDEADR 381
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
++E G E+Q +I M P ++RQT++FSAT+
Sbjct: 382 LLELGFSAEIQELIRMCP------------------------RRRQTMLFSATM 411
>gi|328874156|gb|EGG22522.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 576
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 167/357 (46%), Gaps = 70/357 (19%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L+L P L+ S L FK+P+ IQ IP +G+D++ +A+TGSGKT AF +PI+
Sbjct: 94 SFGDLKLQPWLVNSCKILGFKQPSNIQYNTIPKVL-EGRDILASAKTGSGKTAAFAIPIL 152
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
L E+ P G + A+++TPTRELA+Q+ + K + +NV
Sbjct: 153 SLLSED-------------------PYG-VFAVVLTPTRELAVQIGEQFKAIGSAMNVNC 192
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
++GG+ + Q +L RP ++V TPGRL +S G K + L F VLDEADR++
Sbjct: 193 AVVIGGIDSVAQSLVLDKRPHIIVATPGRLASHLSNGLK--IALKFCKFLVLDEADRILC 250
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
E++ I++ LP + RQTL++SAT+ + KK
Sbjct: 251 EDFELEIEKIVEHLPPI----------------------ENRQTLLYSATM---TNNLKK 285
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ +K + +T+ + L++ +I KD
Sbjct: 286 LQLVPMKDPFVFEDNSKYDTV----------------------DTLKQHYIYMPALAKDC 323
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+L Y+L Q I+F + + + +L L I +LH+ + Q+ RL+ Q
Sbjct: 324 HLVYLLKSFPQSSCIIFVNNCRTVEAVKGMLNKLDIKTVSLHSFLDQKGRLRALKQF 380
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 160/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 306 SFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIIPIL 364
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R I+ PTRELA+Q + +A ++
Sbjct: 365 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 405
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 406 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 463
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+
Sbjct: 464 LEDGFTDELNEILTTIP------------------------KSRQTMLFSATMT------ 493
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIEC---K 469
N+++ L R G+ V + VD V L + F+ +
Sbjct: 494 -----------------NNVDKLI-RVGLNRPVRLMVDAKKQTV--GTLIQEFVRLRPGR 533
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
EE + YL + + R IVF S + + +LG+ V LH M Q R+K
Sbjct: 534 EEKRLGYLIVLCKNIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVTELHGSMSQEQRIK 591
>gi|121702529|ref|XP_001269529.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
gi|143462228|sp|A1CR32.1|RRP3_ASPCL RecName: Full=ATP-dependent rRNA helicase rrp3
gi|119397672|gb|EAW08103.1| ATP-dependent RNA helicase , putative [Aspergillus clavatus NRRL 1]
Length = 473
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 164/351 (46%), Gaps = 71/351 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + L ++ + +K PTPIQ IP A Q +D+IG AETGSGKT AF LPI+
Sbjct: 54 SFKDLGIIDQLCEACATMGYKAPTPIQAESIPLAL-QDRDLIGLAETGSGKTAAFALPIL 112
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L+++ P+ L++ PTRELA Q++ + + INVR
Sbjct: 113 QALMDK-------------------PQSFF-GLVLAPTRELAFQISQSFEALGSTINVRC 152
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q L +P ++V TPGRL + + + L TL + V+DEADR+++
Sbjct: 153 AVIVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGF--SLRTLKYLVMDEADRLLD 210
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
L I+ +LP ++R+T +FSAT++
Sbjct: 211 MDFGPLLDKILKILP------------------------RERRTFLFSATMS-------- 238
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ +E+L +RA + + + +N + L +S+ + KD
Sbjct: 239 ---------------SKVESL-QRASLSNPLRVSVSSNKYQTVSTLLQSYRFIPHKHKDI 282
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL Y+L+ I+F ++ + IS LL+ LG LH Q+ Q +RL
Sbjct: 283 YLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLHGQLSQSSRL 333
>gi|417777782|ref|ZP_12425596.1| DEAD/DEAH box helicase [Leptospira weilii str. 2006001853]
gi|410782079|gb|EKR66644.1| DEAD/DEAH box helicase [Leptospira weilii str. 2006001853]
Length = 513
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L + VLDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLDDIKIVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 159/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 298 SFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIVPIL 356
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R I+ PTRELA+Q + +A ++
Sbjct: 357 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 397
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 398 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 455
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+
Sbjct: 456 LEDGFAEELNEILTTIP------------------------KSRQTMLFSATMT------ 485
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIECK--- 469
NS++ L R G+ V + VD V L + F+ +
Sbjct: 486 -----------------NSVDKLI-RVGLNKPVRLMVDSKKQTV--GTLVQEFVRLRPGR 525
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + YL ++ R IVF + + ++G+ LH M Q R+K
Sbjct: 526 EDKRLGYLMFLCKTVYTNRVIVFFRQKKEAHRVRIVFGLMGLKAAELHGSMSQEQRIK 583
>gi|27229058|ref|NP_080636.2| probable ATP-dependent RNA helicase DDX47 [Mus musculus]
gi|52782790|sp|Q9CWX9.2|DDX47_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|26345792|dbj|BAC36547.1| unnamed protein product [Mus musculus]
gi|26368455|dbj|BAB26843.2| unnamed protein product [Mus musculus]
gi|66365081|gb|AAH95944.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124297422|gb|AAI32243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|124298172|gb|AAI32245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Mus musculus]
gi|148678592|gb|EDL10539.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_b [Mus
musculus]
Length = 455
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 171/376 (45%), Gaps = 73/376 (19%)
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
+A PD L AE E + +L + +L ++ +L + +PT IQ IP A
Sbjct: 1 MAADEEPDSPSGALQTAAE-EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL 59
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
QG+D+IG AETGSGKT AF LPI+ LLE ++ L AL++
Sbjct: 60 -QGRDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVL 98
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + +
Sbjct: 99 TPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLE 158
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ L L + V+DEADR++ E+ I+ ++P
Sbjct: 159 NTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP-------------------- 196
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 ----RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV-------------- 235
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 --------EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 287
Query: 511 IDVWTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 288 FTAIPLHGQMSQSKRL 303
>gi|423137936|ref|ZP_17125579.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371958886|gb|EHO76587.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 528
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFIEDIEKI---LTFTN---------------------EDKRMLFFSATMPEEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + IVFC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIVFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|374323237|ref|YP_005076366.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus terrae
HPL-003]
gi|357202246|gb|AET60143.1| RNA helicase exp9 (Exported protein 9) [Paenibacillus terrae
HPL-003]
Length = 529
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 169/354 (47%), Gaps = 83/354 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E L P ++++I L F+E TPIQ IP A QG+D+IG A+TG+GKT AFG+P++
Sbjct: 4 FAEFNLEPKVLEAITELGFEEATPIQSQSIPLAL-QGRDMIGQAQTGTGKTAAFGIPLIS 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ +K +RALI+ PTRELA+QV + ++ +++ +R +
Sbjct: 63 KISRNDDK--------------------IRALIMAPTRELAIQVAEEIEKLSRFKGLRTL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG +Q R LK +P++++GTPGRL + ++ + ++L ++ VLDEAD M++
Sbjct: 103 PIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLEDVNTVVLDEADEMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++QSI+ +P +RQT++FSAT+ L+
Sbjct: 160 GFMEDIQSILKQVP------------------------DERQTMLFSATMPPNIKRLAEQ 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K +H S+ KQ V A +++++IE E
Sbjct: 196 FLKNPEHVSVIPKQ------------------------------VSAPLIDQAYIEVPER 225
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L ++ + IVF + + ++ L+ G LH + Q R
Sbjct: 226 QKFEALSRLIDMESPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQR 279
>gi|330817865|ref|YP_004361570.1| ATP-dependent RNA helicase [Burkholderia gladioli BSR3]
gi|327370258|gb|AEA61614.1| Putative ATP-dependent RNA helicase 2 [Burkholderia gladioli BSR3]
Length = 485
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 169/359 (47%), Gaps = 68/359 (18%)
Query: 171 STEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+T DA +++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+GKT +
Sbjct: 6 ATSVDATFDQFGLAPDILKAIAEQGYTTPTPIQAKAIPVVL-SGRDVMGAAQTGTGKTAS 64
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVA 288
F LPI+QRLL + +A +P H +RALI+TPTRELA QV ++ A
Sbjct: 65 FSLPIIQRLLPQANSSA-------------SPARHPVRALILTPTRELADQVAANVHAYA 111
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
K +R + GG+ Q L+ E+++ TPGRL + + ++ L + VLD
Sbjct: 112 KHTALRSAVVFGGVDMNSQMAELRRGVEILIATPGRLLDHV---QQKTANLGQVQMLVLD 168
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADRM++ G +LQ I+++LP K+RQTL+FSAT +
Sbjct: 169 EADRMLDMGFLPDLQRILNLLP------------------------KQRQTLLFSATFSP 204
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
KKL L + Q++ R+N ++T + E
Sbjct: 205 EI---KKLASTYLSNPQTIE------------VARSNATATNVTQVV----------YEI 239
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E DK A + ++ + IVFC S ++ L+ G+ +H Q R++
Sbjct: 240 AEGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRSQNERMQ 298
>gi|340728741|ref|XP_003402675.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like [Bombus
terrestris]
Length = 452
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 169/362 (46%), Gaps = 76/362 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L L L++ + K PTPIQK CIP G D IG A+TGSGKTLAF LPI+
Sbjct: 2 SFAALNLSSWLVQQCNFMGLKCPTPIQKNCIPKIL-AGDDCIGCAKTGSGKTLAFALPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+L E+ P G + ALI+TPTRELA Q+ D + K I ++
Sbjct: 61 QKLSED-------------------PYG-IFALILTPTRELAFQIADQFSAIGKSIGLKK 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q L P +VV TPGRL + + L + F VLDEADR++E
Sbjct: 101 CVIVGGMDMVVQGLELSKHPHIVVATPGRLADHLESCNT--FSLKQIKFLVLDEADRLLE 158
Query: 356 NGHF-RELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
GHF +L++I + LP K++Q L+FSAT+ + D
Sbjct: 159 -GHFDDQLKTIFEALP------------------------KRKQMLLFSATMTDTLD--- 190
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
K+KH + S + + + VA V +L++ +I C + +D
Sbjct: 191 KVKH-----------IASSKAFIWESKDESGVATV---------KELDQRYILCPSDVRD 230
Query: 475 AYLY-YILSVHGQ---GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
++L I + G G ++F + + +S L +G LHA ++Q+ RL +
Sbjct: 231 SFLVEAIRTFRGSNKDGSIMIFTDTCKHCQVLSMTLNDVGFKNVALHAMIKQKDRLAALT 290
Query: 531 QM 532
Q
Sbjct: 291 QF 292
>gi|421095225|ref|ZP_15555938.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. 200801926]
gi|410361935|gb|EKP12975.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. 200801926]
Length = 513
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPAIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE LE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLE--------LESK-----------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L+ + VLDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPI------------------------DRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|324503749|gb|ADY41623.1| ATP-dependent RNA helicase DDX54 [Ascaris suum]
Length = 799
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 168/352 (47%), Gaps = 76/352 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W L L + K+I + +++PTPIQ+ IP GKDV+ + TGSGKT AF +P++Q
Sbjct: 40 WQALGLDHAVFKAIEKKGYRQPTPIQRKAIPLII-DGKDVVAMSRTGSGKTAAFVVPMLQ 98
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L K E G RAL+I PTRELALQ K + + +R
Sbjct: 99 KL--------KRREVNGT-----------RALLIAPTRELALQTFKFTKELGRFTGLRCA 139
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG S E+Q + +P++++ TPGRL L+ E +L L T+ + V DEADR+ E
Sbjct: 140 ALVGGDSIEEQFGAIHEKPDIIIATPGRLLHLII--EMNL-RLTTVQYLVFDEADRLFEM 196
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-LSADFRKK 415
G +L I+ LP RQTL+FSAT+ + DF K
Sbjct: 197 GFSEQLHEILKRLP------------------------DNRQTLLFSATLPKMLVDFAK- 231
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK-D 474
AG+ + +V L ++++L F+ C+ DK
Sbjct: 232 ------------------------AGL-TDPVLVRLDVDEKISDRLSMIFLTCRTADKIS 266
Query: 475 AYLYYI-LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
A+LY + L++ TIVFC ++ + +++++ + ID L++Q+ AR
Sbjct: 267 AFLYLVRLAIANNEMTIVFCATMKHVEYLAAVAQRAAIDCVVLYSQLDAAAR 318
>gi|195332686|ref|XP_002033028.1| GM21090 [Drosophila sechellia]
gi|194124998|gb|EDW47041.1| GM21090 [Drosophila sechellia]
Length = 522
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 169/364 (46%), Gaps = 75/364 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + + L L P L+K + +L K TPIQ+ CIPA G+D IGAA+TGSGKT AF L
Sbjct: 5 EANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAIL-AGQDCIGAAKTGSGKTFAFAL 63
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI++RL EE P H AL++TPT ELA Q+++ + +
Sbjct: 64 PILERLSEE-------------------PVSHF-ALVLTPTHELAYQISEQFLVAGQAMG 103
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
VRV + GG + + L RP +VV PGRL + ++G + L + V+DEADR
Sbjct: 104 VRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDT--FSFDNLKYLVVDEADR 161
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M+ NG F E +II + C+ K RQ L FSAT+ DF
Sbjct: 162 ML-NGDFDESLAII-----------------ERCLP------KTRQNLFFSATM---KDF 194
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
K+ + + I + ++VA V+ L++ ++ C + D
Sbjct: 195 MKE------------SSIFPIASDCFEWSQDSDVATVE---------TLDQRYLLCADYD 233
Query: 473 KDAYLYYILSVHGQG----RTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKL 528
+D L L + +G ++F + + +S LK + ID LH M+Q+ R+
Sbjct: 234 RDMVLIEALRKYREGNENANVMIFTNTKKYCQLLSMTLKNMDIDNVCLHGFMRQKERVAA 293
Query: 529 FSQM 532
S+
Sbjct: 294 LSRF 297
>gi|395850554|ref|XP_003797848.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Otolemur
garnettii]
Length = 441
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 171/371 (46%), Gaps = 76/371 (20%)
Query: 156 GPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
G +A + E EI T + +L + +L ++ +L + +PT IQ IP A QG+D
Sbjct: 5 GEHEAPQPAAEEEEIKT----FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL-QGRD 59
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRE 275
+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTRE
Sbjct: 60 IIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRE 99
Query: 276 LALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
LA Q+++ + + I V+ IVGG+ + Q L +P VV+ TPGRL + + +
Sbjct: 100 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGF 159
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L L + V+DEADR++ E+ I+ ++P +
Sbjct: 160 --NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------R 193
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 194 DRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------- 231
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 232 ---EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIP 288
Query: 516 LHAQMQQRARL 526
LH QM Q RL
Sbjct: 289 LHGQMSQSKRL 299
>gi|156052799|ref|XP_001592326.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160358660|sp|A7EML8.1|RRP3_SCLS1 RecName: Full=ATP-dependent rRNA helicase rrp3
gi|154704345|gb|EDO04084.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 482
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 71/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LPI+Q LL++ +
Sbjct: 74 LGYKAPTPIQRESIPLAL-QGRDLIGLAETGSGKTAAFALPILQSLLDKPQP-------- 124
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L L++ PTRELA Q++ + + I V+ IVGGM Q L
Sbjct: 125 ------------LFGLVLAPTRELAYQISQSFEALGSIIRVKCAVIVGGMDMVPQAIALG 172
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L +L + V+DEADR+++ L I+ +LP
Sbjct: 173 KKPHIIVATPGRLLDHLENTKGF--SLRSLKYLVMDEADRLLDLDFGPILDKILKVLP-- 228
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSATI+ +
Sbjct: 229 ----------------------RERRTYLFSATIS-----------------------SK 243
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA ++ + + +N + L +++I KD YL Y+L+ I+F
Sbjct: 244 VESL-QRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLVHKDTYLIYLLNEFAGQSAIIF 302
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + I+ LL+ LG LH Q+ Q +RL
Sbjct: 303 TRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRL 336
>gi|428172478|gb|EKX41387.1| hypothetical protein GUITHDRAFT_96054 [Guillardia theta CCMP2712]
Length = 654
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 174/352 (49%), Gaps = 51/352 (14%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W E L P ++++I ++K P+PIQ CIP +DV+G A+TGSGKT AF LP++
Sbjct: 224 WEESGLPPEILEAIKEKKYKIPSPIQMQCIPLGL-LNRDVVGIAQTGSGKTAAFVLPMLV 282
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ K + +D AP+G L ALI+ PTRELA Q+ D K +N+R
Sbjct: 283 YI----SKQPPITQDT-------APEGPL-ALILAPTRELANQIYDEAITFCKFMNIRCF 330
Query: 297 PIVGG---MSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
P+VGG S E+Q ++ E++V TPGRL + + E+ LV L+ ++ VLDEADRM
Sbjct: 331 PLVGGGGVKSIEEQGFTVRQGVEILVATPGRLIDCL---ERRLVVLNQCNYVVLDEADRM 387
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
I+ G ++Q+I+D +P +N + + + N + + RQT +FSAT+
Sbjct: 388 IDMGFEPQVQAILDAMPSSNLKPEDDAAEEGN------QEFRYRQTFMFSATMP------ 435
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+IE ++ + R A V + A+ +E+ FI C E K
Sbjct: 436 -----------------PAIERITRKYLRRP--AFVTVGEAGQTASTVEQHFIFCSENQK 476
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+A L +L+ G+ +VF + + L G V LH Q R
Sbjct: 477 NARLLDLLA-RGKPPIMVFVNARKNCDVLHKELSSRGHRVTLLHGGKSQEGR 527
>gi|350537559|ref|NP_001233477.1| probable ATP-dependent RNA helicase DDX47 [Pan troglodytes]
gi|343958142|dbj|BAK62926.1| apolipoprotein-L domain-containing protein 1 [Pan troglodytes]
gi|410264252|gb|JAA20092.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410305384|gb|JAA31292.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
gi|410329313|gb|JAA33603.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Pan troglodytes]
Length = 455
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 172/372 (46%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P + + +V + E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTETSQPIVEKEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ +I + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 72/362 (19%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
A+++L + P ++++ + FK PTPIQ IP A Q +DVIG A+TGSGKT AF +PI+
Sbjct: 110 AFSDLGVIPQIVEACTNMGFKHPTPIQVKSIPEAL-QSRDVIGLAQTGSGKTAAFTIPIL 168
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L + PK A ++ PTRELA Q++ ++ + I VR
Sbjct: 169 QALWDN-------------------PKPFF-ACVLAPTRELAYQISQQVEALGSTIGVRS 208
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGGM Q L RP V+V TPGRL + + + L L + V+DEADR+++
Sbjct: 209 ATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKG--FSLRGLQYLVMDEADRLLD 266
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+ IID L + S+ R++R T++FSAT+ K
Sbjct: 267 ----MDFGPIIDKL-------------------LQSIPRERR-TMLFSATMTTKV---AK 299
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L+ SLK N V++ + L++ ++ KD
Sbjct: 300 LQRASLK----------------------NPVRVEVDTKYTTVSTLKQHYLFMPFAHKDT 337
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITW 535
YL ++ + IVF ++ + +S LL++LG LH Q+ Q+ARL ++ T
Sbjct: 338 YLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLGALNKFKTG 397
Query: 536 IR 537
R
Sbjct: 398 GR 399
>gi|322703417|gb|EFY95026.1| ATP-dependent rRNA helicase RRP3 [Metarhizium anisopliae ARSEF 23]
Length = 478
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 174/366 (47%), Gaps = 73/366 (19%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
+E +V E++ T+ + EL + L ++ L +K PTPIQ+ IP A Q +D+IG A
Sbjct: 45 DEAVVEESD--TQPKTFKELGIVDSLCEACESLNYKFPTPIQEKSIPIAL-QDRDIIGLA 101
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
ETGSGKT AF LPI+Q LL++ + L L++ PTRELA Q+
Sbjct: 102 ETGSGKTAAFALPILQALLDKPQP--------------------LFGLVLAPTRELAHQI 141
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
+ + I++R IVGG+ Q L +P ++V TPGRL + + + L
Sbjct: 142 GQAFEALGSSISLRCAVIVGGLDMVPQAVALGKKPHIIVATPGRLVDHLEKTKGF--SLR 199
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
TL + V+DEADR+++ + ++ +P ++R+T
Sbjct: 200 TLKYLVMDEADRLLDMDFGPAIDKLLKFIP------------------------RERRTY 235
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT++ + +E+L +RA +R V + +N +
Sbjct: 236 LFSATLS-----------------------SKVESL-QRASLRDPVRVSVSSNKYQTVST 271
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
L ++ + ++ KD YL Y+++ TIVF ++ + I+ LL+ LG LH Q+
Sbjct: 272 LLQNLLVVPQKRKDTYLIYLVNEFTGKSTIVFTRTVWETQRIAILLRTLGFGAIPLHGQL 331
Query: 521 QQRARL 526
Q ARL
Sbjct: 332 SQSARL 337
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 164/366 (44%), Gaps = 76/366 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E ++ + L ++KSI L F +PTPIQ A IP A GKD++G A TGSGKT AF +
Sbjct: 191 EHTSFLSMNLSRPIIKSITALGFNKPTPIQAATIPVAL-LGKDIVGNAVTGSGKTAAFII 249
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
P+++RLL D+G++A R L++ PTREL +Q + +A +
Sbjct: 250 PMLERLL---------YRDRGKKA------AATRCLVLVPTRELGVQCFEVGTKLAAHTD 294
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R +VGG+S + QE L+ RP+VV+ TPGRL + + L L VLDEADR
Sbjct: 295 IRFSLVVGGLSVKTQEATLRTRPDVVIATPGRLIDHLRNSPAFT--LDALDILVLDEADR 352
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD- 411
M+ +G EL II PM+ RQT++FSAT+ S D
Sbjct: 353 MLSDGFADELTEIIKSCPMS------------------------RQTMLFSATMTDSVDE 388
Query: 412 -----FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI 466
K ++ + + +GL E + RAG
Sbjct: 389 LVRMSLDKPVRLFVDPKRSTASGLVQ-EFVRVRAG------------------------- 422
Query: 467 ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
KE ++ A L + + R I+F S + + ++L + LH + Q RL
Sbjct: 423 --KESERSALLVTLCKRTFKSRAIIFFRSKKLAHQMRIVFRLLDMKADELHGDLSQEQRL 480
Query: 527 KLFSQM 532
K Q
Sbjct: 481 KALQQF 486
>gi|348569354|ref|XP_003470463.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Cavia porcellus]
Length = 455
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 171/368 (46%), Gaps = 73/368 (19%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
D+ EEL AE E + +L + +L ++ +L + +PT IQ IP A QG+D+IG
Sbjct: 8 DSGEELRPAAE-EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPMAL-QGRDIIG 65
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+ LLE ++ L AL++TPTRELA
Sbjct: 66 LAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRELAF 105
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + +
Sbjct: 106 QISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGF--N 163
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L + V+DEADR++ E+ I+ ++P + R+
Sbjct: 164 LRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRK 199
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 200 TFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV---------------------- 234
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG LH
Sbjct: 235 EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 294
Query: 519 QMQQRARL 526
QM Q RL
Sbjct: 295 QMSQSKRL 302
>gi|154315003|ref|XP_001556825.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|160358659|sp|A6RW56.1|RRP3_BOTFB RecName: Full=ATP-dependent rRNA helicase rrp3
gi|347841755|emb|CCD56327.1| similar to ATP-dependent rRNA helicase rrp3 [Botryotinia
fuckeliana]
Length = 486
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 71/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LPI+Q LL++ +
Sbjct: 78 LGYKAPTPIQRESIPLAL-QGRDLIGLAETGSGKTAAFALPILQALLDKPQP-------- 128
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L L++ PTRELA Q++ + + I V+ IVGGM Q L
Sbjct: 129 ------------LFGLVLAPTRELAYQISQQFEALGSVIRVKCAVIVGGMDMVPQSIALG 176
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L +L + V+DEADR+++ L I+ +LP
Sbjct: 177 KKPHIIVATPGRLLDHLENTKGF--SLRSLKYLVMDEADRLLDLDFGPILDKILKVLP-- 232
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSATI+ +
Sbjct: 233 ----------------------RERRTYLFSATIS-----------------------SK 247
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA ++ + + +N + L +++I KD YL Y+L+ I+F
Sbjct: 248 VESL-QRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIF 306
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + I+ LL+ LG LH Q+ Q +RL
Sbjct: 307 TRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRL 340
>gi|451847806|gb|EMD61113.1| hypothetical protein COCSADRAFT_192893 [Cochliobolus sativus
ND90Pr]
Length = 518
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 163/345 (47%), Gaps = 70/345 (20%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L+F PTPIQ IP A +G+DVIG AETGSGKT AF LPI+Q LLE+++
Sbjct: 107 LKFTNPTPIQAQAIPLAL-EGRDVIGLAETGSGKTAAFVLPILQALLEKQQS-------- 157
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L LI+ PTRELA Q+ + + INV+ +VGGM Q L
Sbjct: 158 ------------LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALS 205
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P ++V TPGRL + + + L L + VLDEADR+++ L I+ +LP
Sbjct: 206 KKPHIIVATPGRLLDHLENTKGF--SLKHLKYMVLDEADRLLDLDFGPVLDKILKVLP-- 261
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
R+ R T ++SAT++ +
Sbjct: 262 ---------------------REGRHTYLYSATMS-----------------------SK 277
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA ++ V + ++ + + L + +I + KD YL ++L+ + TI+F
Sbjct: 278 VESL-QRAALQNPVRVSISSSSHQVVSTLLQRYIFLPHKYKDLYLIHLLNDNIGHPTIIF 336
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIR 537
++ + I+ LL+ LG LH Q+ Q ARL ++ T R
Sbjct: 337 SRTVNETQRIAILLRTLGFGAIPLHGQLSQSARLGALNKFKTQSR 381
>gi|325568403|ref|ZP_08144770.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|420263005|ref|ZP_14765645.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
gi|325158172|gb|EGC70325.1| cold-shock DEAD box protein A [Enterococcus casseliflavus ATCC
12755]
gi|394769969|gb|EJF49787.1| cold-shock DEAD box protein A [Enterococcus sp. C1]
Length = 508
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 167/359 (46%), Gaps = 85/359 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L L+ S+ R F+E TPIQ+A IP A GKDVIG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-AGKDVIGQAQTGTGKTAAFGLPML- 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
EK P H L+ L+I PTRELA+Q + L + K +RV
Sbjct: 61 --------------------EKIDPANHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSA 410
G +++ II +P RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVPDV------------------------RQTLLFSATMPPAIKNIGV 193
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
F K+ +H +K+K+ + A+ +++ ++ K+
Sbjct: 194 KFMKEPEHVQIKAKE------------------------------MTADLIDQYYVRSKD 223
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + +L V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 224 YEKFDVMTRLLDVQSPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVL 282
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 169/374 (45%), Gaps = 77/374 (20%)
Query: 160 AEEELVNE---AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDV 216
A EE +E AE+S + ++ E L +++ + + F PTPIQ+ IP A GKD+
Sbjct: 322 APEEQTSEQSAAELSKK--SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALL-GKDI 378
Query: 217 IGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTREL 276
+G+A TGSGKT AF +PI++RLL K R I+ PTREL
Sbjct: 379 VGSAVTGSGKTAAFVVPILERLLFRPRKVPTS-----------------RVAILMPTREL 421
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A+Q + +A ++ +VGG S +QE +LK RP+V++ TPGR + M
Sbjct: 422 AVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 481
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 482 VD--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KS 515
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCV 456
RQT++FSAT+ S D KL R G+ V ++ +
Sbjct: 516 RQTMLFSATMTDSVD---KLI---------------------RVGLNRPVRLMVDSKKNT 551
Query: 457 LANKLEESFIECKEEDKDAYLYYILSVHGQ---GRTIVFCTSIAALRHISSLLKILGIDV 513
N ++E F+ + +D L Y+L + + GR IVF + +LG+
Sbjct: 552 SMNLIQE-FVRLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIAFGLLGLKA 610
Query: 514 WTLHAQMQQRARLK 527
LH M Q R++
Sbjct: 611 AELHGSMSQEQRIR 624
>gi|326911793|ref|XP_003202240.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Meleagris gallopavo]
Length = 447
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 72/342 (21%)
Query: 185 LLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK 244
+L ++ +L +K PT IQ IP A QG+D+IG AETGSGKT AF LPI+Q LL+
Sbjct: 29 VLCEACDQLGWKIPTKIQVEAIPVAL-QGRDIIGLAETGSGKTGAFALPILQALLD---- 83
Query: 245 AAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMST 304
AP+ L AL++TPTRELA Q+++ + + I V IVGG+ +
Sbjct: 84 ---------------APQ-RLFALVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDS 127
Query: 305 EKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
Q L +P +++ TPGRL + + + L L F V+DEADR++ E+
Sbjct: 128 MSQSLALAKKPHIIIATPGRLVDHLENTKGF--NLRALKFLVMDEADRILNMDFETEVDK 185
Query: 365 IIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK 424
I+ ++P + R+T +FSAT+ +KL+ +LK+
Sbjct: 186 ILKVIP------------------------RDRKTFLFSATMTKQV---QKLQRAALKNP 218
Query: 425 QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH 484
+ +T+ KL++ +I + KD+YL YIL+
Sbjct: 219 VKCAVSSKYQTV----------------------EKLQQYYIFIPSKFKDSYLVYILNEL 256
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+VFC++ + + LL+ LG LH QM Q RL
Sbjct: 257 AGNSFMVFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRL 298
>gi|289766283|ref|ZP_06525661.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
gi|289717838|gb|EFD81850.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
Length = 528
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFIEDIEKI---LTFTN---------------------EDKRMLFFSATMPEEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|91787410|ref|YP_548362.1| DEAD/DEAH box helicase [Polaromonas sp. JS666]
gi|91696635|gb|ABE43464.1| DEAD/DEAH box helicase-like protein [Polaromonas sp. JS666]
Length = 492
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 166/352 (47%), Gaps = 65/352 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+++ L L L +++ + ++ TPIQ+ IP QGKDV+GAA+TG+GKT AF LP++
Sbjct: 4 SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVL-QGKDVMGAAQTGTGKTAAFSLPLL 62
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
QR+L K E A + +RAL++ PTRELA+QV + +K AK N+R
Sbjct: 63 QRML------------KHENASTSPARHPVRALVLLPTRELAVQVAEQVKLYAKHTNLRS 110
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GGM + Q LK EV+V TPGRL + + K+ V L+ + + VLDEADRM++
Sbjct: 111 AVVFGGMDMKPQTLELKQGVEVLVATPGRLLDHIEA--KNTV-LNQVEYVVLDEADRMLD 167
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ I+ LP K+R TL+FSAT + K+
Sbjct: 168 IGFLPDLQRILSYLP------------------------KQRITLLFSATFSPEI---KR 200
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L L+ ++ S T A+ +E+ F +DK
Sbjct: 201 LASSYLQDPVTIEVARSNAT----------------------ASTVEQHFYSVGADDKRR 238
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L+ IL G + VF S ++ L+ G+ LH Q RLK
Sbjct: 239 ALHQILKERGMKQAFVFVNSKLGCARLARSLEREGLKTTALHGDKSQDERLK 290
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 181/357 (50%), Gaps = 41/357 (11%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +W+E P +++ I + +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 404 IPNPIRSWSESGFPPEIIEIIDSVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 462
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + + + LED + P A+I+ PTRELA Q+ + +
Sbjct: 463 FLIPLLSWI--QSLPKIERLEDVDQ-----GPY----AIIMAPTRELAQQIEEETIKFGQ 511
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 512 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 568
Query: 350 ADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 569 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDEKKLMENFYTKKKYRQTVMFTATMPP 628
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + +L L+ +V + S+ +ER TN V
Sbjct: 629 AVE---RLARSYLRRPATVY-IGSVGKPTER------------TNQIVYM---------M 663
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E DK L ILS + I+F ++ L+ LG + TLH Q R
Sbjct: 664 GENDKRKKLMQILSAGIEPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 720
>gi|142982611|sp|P0C2N8.1|DRS1_NEUCR RecName: Full=ATP-dependent RNA helicase drs-1
Length = 829
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 167/372 (44%), Gaps = 78/372 (20%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE N+ + E ++ E+ L +++ + + F +PTPIQ IP + GKDV+G A
Sbjct: 281 EEE--NQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGA 337
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELAL 278
TGSGKT AF +PI++RLL Y PK R +I+TPTRELA+
Sbjct: 338 VTGSGKTAAFVVPILERLL-------------------YRPKKVPTTRVVILTPTRELAI 378
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q +A +++ VGG+S + QE L+ RP+VV+ TPGR + M V+
Sbjct: 379 QCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD 438
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
T+ VLDEADRM+E+G EL I+ LP K RQ
Sbjct: 439 --TIEILVLDEADRMLEDGFADELNEILTTLP------------------------KSRQ 472
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T++FSAT+ S D +L RAG+ V I+ + A
Sbjct: 473 TMLFSATMTSSVD---RLI---------------------RAGLNKPVRIM-ADSQKKTA 507
Query: 459 NKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L + F+ + E ++ YL +I R I+F + + + G+
Sbjct: 508 GTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAE 567
Query: 516 LHAQMQQRARLK 527
LH M Q R++
Sbjct: 568 LHGSMNQAQRIQ 579
>gi|418693853|ref|ZP_13254902.1| DEAD/DEAH box helicase [Leptospira kirschneri str. H1]
gi|421105887|ref|ZP_15566463.1| DEAD/DEAH box helicase [Leptospira kirschneri str. H2]
gi|409958430|gb|EKO17322.1| DEAD/DEAH box helicase [Leptospira kirschneri str. H1]
gi|410008609|gb|EKO62269.1| DEAD/DEAH box helicase [Leptospira kirschneri str. H2]
Length = 519
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 167/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSESIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLIKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VPI GG E+Q R L+ P++V+ TPGR+ + M G HL E + VLDEAD M++
Sbjct: 105 VPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDETKIV---VLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEYILKDTP------------------------SDRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL ++ + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKK--FQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALTRLIEYRNVKLALVFCNTKVQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|281209095|gb|EFA83270.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1070
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 183/416 (43%), Gaps = 94/416 (22%)
Query: 128 KNETGKKKKKKKKGKKIKTVEESV-----------AVSNGPDDAEEELVNEAEISTEFDA 176
K E K+KK ++ K K +E S +VS G ++ ++E + +
Sbjct: 199 KTEQRKQKKLDQQNKAEKKLETSFPSIEIVNNKDGSVSFGGEEDDDESGKKKKKKISGGG 258
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ + LH L K+I R FK PTPIQ+ IP G DV+ A TGSGKT AF +P++Q
Sbjct: 259 FQSMELHKTLFKAIVRKGFKVPTPIQRKTIPLIL-AGSDVVAMARTGSGKTAAFVVPMIQ 317
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L GE + K RA+I++PTRELA+Q +K G N+R
Sbjct: 318 KL--------------GEHSIKVGA----RAIILSPTRELAIQTYKVVKDFTYGSNLRSC 359
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE----LHTLSFFVLDEADR 352
+VGG S E Q L P+++V TPGRL HL E L T+ + V DEADR
Sbjct: 360 LVVGGDSMEDQFAELARNPDIIVATPGRLVH-------HLQEVGMGLSTVQYIVFDEADR 412
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI-ALSAD 411
+ E G ++L I+ L RQTL+FSAT+ ++ D
Sbjct: 413 LFEMGFQQQLNDIVSKLS------------------------DNRQTLLFSATLPSMLVD 448
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F RAG+ N +V L + ++ L SF + +
Sbjct: 449 FV-------------------------RAGL-TNPILVRLDSETKISENLALSFYTIRHD 482
Query: 472 DKDAYLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+K A L Y+L + + TI+F + + ++ LK ID +H + AR
Sbjct: 483 EKLAVLLYLLKEVIEDKQPTIIFTATKYHVEYLQIFLKQAKIDSTIIHGYLDPVAR 538
>gi|241959442|ref|XP_002422440.1| ATP-dependent rRNA helicase, putative; ribosomal RNA-processing
protein, putative [Candida dubliniensis CD36]
gi|223645785|emb|CAX40447.1| ATP-dependent rRNA helicase, putative [Candida dubliniensis CD36]
Length = 499
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 72/354 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+F + EL L P L++SI ++F +PTPIQ IP A +GKD+IG A+TGSGKT AF +
Sbjct: 84 KFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHAL-EGKDIIGLAQTGSGKTAAFAI 142
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q L ++ AL++ PTRELA Q+ D + +
Sbjct: 143 PILQSLWHAQQPYF--------------------ALVLAPTRELAFQIKDTFDALGSSMG 182
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGGM Q R L +P ++V TPGR+ + + + L L + V+DEADR
Sbjct: 183 LRSSCIVGGMDMMDQARDLMRKPHIIVATPGRIMDHLEHTKG--FSLKNLKYLVMDEADR 240
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ L I+ ++P+ KR T +FSAT+
Sbjct: 241 LLDMDFGPALDKILKVIPI------------------------KRITYLFSATMT----- 271
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
N IE L +RA + N V +++ A+ L +S + +
Sbjct: 272 ------------------NKIEKL-QRASLH-NPVKVSVSSKYQTADNLIQSMMLVNDGY 311
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ L ++L+ IVF ++A + + L +ILG + LH Q+ Q RL
Sbjct: 312 KNTILIHLLNEFIGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRL 365
>gi|254247597|ref|ZP_04940918.1| Helicase [Burkholderia cenocepacia PC184]
gi|124872373|gb|EAY64089.1| Helicase [Burkholderia cenocepacia PC184]
Length = 521
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 68/360 (18%)
Query: 170 ISTEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
++ DA +++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+GKT
Sbjct: 28 VAKPVDATFDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVL-AGRDVMGAAQTGTGKTA 86
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGV 287
+F LPI+QRLL + +A +P H +RALI+TPTRELA QV ++
Sbjct: 87 SFSLPIIQRLLPQANTSA-------------SPARHPVRALILTPTRELADQVAANVHAY 133
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
AK +R + GG+ Q L+ E+++ TPGRL + + ++ L + VL
Sbjct: 134 AKHTPLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHV---QQKTANLGQVQILVL 190
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADRM++ G +LQ I+++LP K+RQTL+FSAT
Sbjct: 191 DEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFSAT-- 224
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
S + KKL L++ Q++ VA + TN V + +
Sbjct: 225 FSGEI-KKLASTYLRNPQTI-----------------EVARSNSTNANV-----TQIVYD 261
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E DK A + +L G + IVFC S ++ L+ G+ +H Q R++
Sbjct: 262 VAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQ 321
>gi|373455480|ref|ZP_09547312.1| hypothetical protein HMPREF9453_01481 [Dialister succinatiphilus
YIT 11850]
gi|371934839|gb|EHO62616.1| hypothetical protein HMPREF9453_01481 [Dialister succinatiphilus
YIT 11850]
Length = 504
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 171/359 (47%), Gaps = 73/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+D + EL + P ++K++ + F+EP+PIQKA IP A GKD+IG A+TG+GKT AFG+P
Sbjct: 2 YDTFKELGIAPEILKAVEDMGFEEPSPIQKAAIPIAL-TGKDLIGQAQTGTGKTAAFGIP 60
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I++R+ + K P+ A++++PTRELA+Q + + +A+ + +
Sbjct: 61 ILERI----------------DTSKPGPQ----AVVLSPTRELAIQSAEEINHLAQYLPI 100
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+PI GG E+Q + L+ P ++V TPGRL + M G ++L + VLDE D M
Sbjct: 101 HALPIYGGQDIERQFKALRKHPNIIVATPGRLMDHMKRGT---IDLSHVQVLVLDEGDEM 157
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++++I+ +P ++RQT+ FSAT+
Sbjct: 158 VDMGFIDDIRTILAGIP------------------------EERQTMFFSATMPEPI--- 190
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++L LK + V ++A +DL +E+ +IE + K
Sbjct: 191 RQLAETFLKDPELVK-------------IKAATVTIDL---------IEQEYIELPDRQK 228
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + ++ LK G LH + Q+ R + Q
Sbjct: 229 FDALCRLLDMQDPELAIVFVRTKRRCDEVTEALKKRGYMAEGLHGDLSQQKRDTVVRQF 287
>gi|402574642|ref|YP_006623985.1| DNA/RNA helicase [Desulfosporosinus meridiei DSM 13257]
gi|402255839|gb|AFQ46114.1| DNA/RNA helicase, superfamily II [Desulfosporosinus meridiei DSM
13257]
Length = 500
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 168/357 (47%), Gaps = 73/357 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L L L+M+SI + F+E TPIQ+ IP+A +GKD+IG A+TG+GKT A+G+P++
Sbjct: 3 TFTDLNLSELVMRSIINMGFEETTPIQEQTIPSAM-EGKDLIGQAQTGTGKTAAYGIPLV 61
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+R++ + E +++ +++ PTRELA+QV + L + + +
Sbjct: 62 ERIMGQSE--------------------NIQGIVLAPTRELAVQVAEELNKIGQFKRIHA 101
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+PI GG + Q R LK RP ++V TPGRL + M + + LH + VLDEAD M+
Sbjct: 102 LPIYGGQGIDWQIRALKKRPHIIVATPGRLMDHM---RRKTIRLHDIKIVVLDEADEMLN 158
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G ++++I+ +P ++RQTL+FSAT+
Sbjct: 159 MGFLEDIETILKEVP------------------------EERQTLLFSATMP-------- 186
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
I+ +++R + + T + V + +E+ ++E E K
Sbjct: 187 ---------------RQIQNIAQRFMKEPQLISIKATGVTV--SDIEQHYVEVTERLKFD 229
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L IL + +IVF + + +S L G +H + Q R + Q
Sbjct: 230 VLSRILDIQSPDLSIVFARTKRRVDELSEALSKRGYSAEGIHGDLTQSKRDSVLRQF 286
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 163/359 (45%), Gaps = 68/359 (18%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
D++ + L ++K++ L F PTPIQ + IP A GKD++G A TGSGKT AF +P+
Sbjct: 173 DSFLSMNLSRPILKALTALNFHTPTPIQASTIPVAL-LGKDIVGNAVTGSGKTAAFVIPM 231
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR 294
++RLL DK + A R +I+ PTRELA+Q D +A +VR
Sbjct: 232 LERLL---------YRDKSKNA------AATRCVILVPTRELAVQCFDVATKLAAHTDVR 276
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
IVGG+S + QE L+ RP+VV+ TPGRL + + + L + VLDEADRM+
Sbjct: 277 FCLIVGGLSVKAQEASLRLRPDVVIATPGRLIDHLRNAPQ--FGLDAVDILVLDEADRML 334
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+G EL I+ P + RQT++FSAT+ S D
Sbjct: 335 SDGFADELAEIVQACP------------------------RGRQTMLFSATMTDSVDELV 370
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC-KEEDK 473
K+ S+N + ++R R+ L + F+ +EED+
Sbjct: 371 KM---------SLNKPVRLFVDAKRTTARS----------------LVQEFVRVRREEDR 405
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L + + R I+F S + +L ++ LH + Q RL+ Q
Sbjct: 406 GGMLAALCKRTFKARAIIFFRSKKLAHQMRVAFALLNLNAGELHGDLTQEQRLRSLQQF 464
>gi|391344138|ref|XP_003746360.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Metaseiulus occidentalis]
Length = 461
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 168/372 (45%), Gaps = 82/372 (22%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
N PDD E++ + EL + +L ++ L+++ P+ IQK IP A QG+
Sbjct: 21 NDPDDGEDK-----------TTFKELGVVDVLCEACEALKWRTPSKIQKEAIPVAL-QGR 68
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+Q LLE L ALI+TPTR
Sbjct: 69 DIIGLAETGSGKTAAFALPILQALLEN--------------------PARLFALILTPTR 108
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I ++ IVGG+ Q +L +P VV+ TPGRL + + +
Sbjct: 109 ELAFQISEQFEALGSTIGIKSAVIVGGIDMMTQAMMLAKKPHVVIATPGRLIDHLENTKG 168
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P R
Sbjct: 169 --FTLKNLRYLVMDEADRILNMDFEEEVDKILKVIP-----------------------R 203
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T ++SAT+ KL+ SL V +T+
Sbjct: 204 ENRRTYLYSATMTKKV---AKLQRASLTDPVRVEVSTKYQTV------------------ 242
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+KL++ ++ + K+ +L ++L IVFC + + ++ +L+ LG
Sbjct: 243 ----DKLQQYYLFIPAKYKEVHLVHLLQDLAGQSFIVFCATCNGTQKLALMLRNLGFTAI 298
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 299 PLHGQMSQAKRL 310
>gi|164428960|ref|XP_001728501.1| hypothetical protein NCU11175 [Neurospora crassa OR74A]
gi|157072353|gb|EDO65410.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 857
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 167/372 (44%), Gaps = 78/372 (20%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE N+ + E ++ E+ L +++ + + F +PTPIQ IP + GKDV+G A
Sbjct: 281 EEE--NQPKKKGEMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGA 337
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELAL 278
TGSGKT AF +PI++RLL Y PK R +I+TPTRELA+
Sbjct: 338 VTGSGKTAAFVVPILERLL-------------------YRPKKVPTTRVVILTPTRELAI 378
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q +A +++ VGG+S + QE L+ RP+VV+ TPGR + M V+
Sbjct: 379 QCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD 438
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
T+ VLDEADRM+E+G EL I+ LP K RQ
Sbjct: 439 --TIEILVLDEADRMLEDGFADELNEILTTLP------------------------KSRQ 472
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T++FSAT+ S D +L RAG+ V I+ + A
Sbjct: 473 TMLFSATMTSSVD---RLI---------------------RAGLNKPVRIM-ADSQKKTA 507
Query: 459 NKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L + F+ + E ++ YL +I R I+F + + + G+
Sbjct: 508 GTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAE 567
Query: 516 LHAQMQQRARLK 527
LH M Q R++
Sbjct: 568 LHGSMNQAQRIQ 579
>gi|107023254|ref|YP_621581.1| DEAD/DEAH box helicase [Burkholderia cenocepacia AU 1054]
gi|116690337|ref|YP_835960.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
cenocepacia HI2424]
gi|170733675|ref|YP_001765622.1| DEAD/DEAH box helicase [Burkholderia cenocepacia MC0-3]
gi|105893443|gb|ABF76608.1| DEAD/DEAH box helicase-like protein [Burkholderia cenocepacia AU
1054]
gi|116648426|gb|ABK09067.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
HI2424]
gi|169816917|gb|ACA91500.1| DEAD/DEAH box helicase domain protein [Burkholderia cenocepacia
MC0-3]
Length = 520
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 68/360 (18%)
Query: 170 ISTEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTL 228
++ DA +++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+GKT
Sbjct: 27 VAKPVDATFDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVL-AGRDVMGAAQTGTGKTA 85
Query: 229 AFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGV 287
+F LPI+QRLL + +A +P H +RALI+TPTRELA QV ++
Sbjct: 86 SFSLPIIQRLLPQANTSA-------------SPARHPVRALILTPTRELADQVAANVHAY 132
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
AK +R + GG+ Q L+ E+++ TPGRL + + ++ L + VL
Sbjct: 133 AKHTPLRSAVVFGGVDMNPQSAELRRGVEILIATPGRLLDHV---QQKTANLGQVQILVL 189
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADRM++ G +LQ I+++LP K+RQTL+FSAT
Sbjct: 190 DEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFSAT-- 223
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
S + KKL L++ Q++ VA + TN V + +
Sbjct: 224 FSGEI-KKLASTYLRNPQTI-----------------EVARSNSTNANV-----TQIVYD 260
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E DK A + +L G + IVFC S ++ L+ G+ +H Q R++
Sbjct: 261 VAEGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKTQIERMQ 320
>gi|353233430|emb|CCD80785.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 722
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 169/330 (51%), Gaps = 64/330 (19%)
Query: 262 KGHLRALIITPTRELALQVTDHLKGVAKGIN-VRVVPIVGGMSTEKQERLLKARPEVVVG 320
+ + L++ PTRELA+QVT HL+ + K ++ +R+ IVGG+S +KQ RLL+ P+++V
Sbjct: 177 RNRVYGLVLVPTRELAIQVTQHLRALMKYVDYIRIETIVGGISVDKQLRLLRRCPDILVA 236
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG-SNKGQ 379
TPGRLW + GE HL+ LH+++ V+DEADRMIE HF +L++I + L ++ +N+G+
Sbjct: 237 TPGRLWHFIQQGEPHLLTLHSVNVVVVDEADRMIEANHFDDLRAIFNWLHSSSSFNNEGK 296
Query: 380 SEQTQNCVTV-------------------SSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
E+ ++ + + + R +RQTL+FSAT+ K GS
Sbjct: 297 EEEQEDTTHLKKTLNLKRKHKLIEMSDHSTDMNRVQRQTLIFSATLTFVHSGALKPGTGS 356
Query: 421 LKSKQSVNGLNS------IETLSERAGMRANVAIVDLTN-------------MC--VLAN 459
K N N+ + L E G++ + ++DL++ +C +
Sbjct: 357 KNHKLLPNNKNTMTKKIKLAVLREMFGLKKSAKVIDLSSNHSTDQSVSNPGLICKSTCPD 416
Query: 460 KLEESFIEC-KEEDKDAYLYYILSV--------HGQGRTIVFCTSIAALRHISSLLK-IL 509
L E + C +E KD L++ ++ + R ++F S + +R ++ +L+ +L
Sbjct: 417 TLSECRLLCPSQESKDIRLFWFIAFGRHLGSSEYSNRRCLIFLNSKSGVRRLAGVLRQLL 476
Query: 510 GIDVWT------------LHAQMQQRARLK 527
D ++ LHA M Q+ RL+
Sbjct: 477 SPDAFSVSGYPSLQYVNVLHADMVQKQRLR 506
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
N E W+ L L ++K++ + PTPIQ A IP A H DV+G+A TGSG
Sbjct: 9 NSQGCRVEVMGWDSLNLPDYIVKALSDCGLENPTPIQTAAIPPALHGFSDVLGSAPTGSG 68
Query: 226 KTLAFGLPIMQRLL----------EEREKAAKML-EDKGEEAEKYAPKGHLRALIITPTR 274
KTLAFG+P++ ++ EE K ++ + K E A P G +
Sbjct: 69 KTLAFGIPLVSKVFSLKTLQSQTCEEESKINSVIDQQKYEVASCVKPCGKKKKRKKETDI 128
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVV 319
L V + L V G +R V +G TE E L P V +
Sbjct: 129 YSGLDVIEELD-VNTG-EIRAVHSLGDPVTEDSETLPIIEPPVCL 171
>gi|319957469|ref|YP_004168732.1| dead/deah box helicase domain-containing protein [Nitratifractor
salsuginis DSM 16511]
gi|319419873|gb|ADV46983.1| DEAD/DEAH box helicase domain protein [Nitratifractor salsuginis
DSM 16511]
Length = 477
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 76/349 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ + P L ++I F+EP+P+QK IP +G+D+I A TG+GKT AFGLP++Q
Sbjct: 3 FEDFNFKPQLAQAIKEAGFREPSPVQKEAIPLIL-EGRDLIAQAHTGTGKTAAFGLPVLQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L + G + AL+I PTRELA QV+D + K +++R
Sbjct: 62 QL---------------------SCDGSVEALVIVPTRELATQVSDEIFRFGKALSIRTA 100
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG S +Q + +++ VVV TPGRL +L+ G+ L + F +LDEAD M++
Sbjct: 101 TVYGGSSYTRQIQHVQS-ASVVVATPGRLIDLLQSGKISL----SPRFVILDEADEMLDM 155
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I LP + RQTL+FSAT++
Sbjct: 156 GFLDDIKEIFTHLP------------------------ESRQTLLFSATMS--------- 182
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
I TL++R + + A V +T V K+ + F E ++D
Sbjct: 183 --------------KEIRTLAQR--ILKDPATVSITGGNVTNEKIRQLFYVVDEPERDDA 226
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L +L ++I+FC + + L G D LH M QR R
Sbjct: 227 LVRLLDYKNPDKSIIFCRMKKEVDRLRDFLAAQGYDAKGLHGDMDQRQR 275
>gi|398332265|ref|ZP_10516970.1| ATP-dependent RNA helicase [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 516
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L + +LDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLDDIKIVILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENTKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|256073668|ref|XP_002573151.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 722
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 169/330 (51%), Gaps = 64/330 (19%)
Query: 262 KGHLRALIITPTRELALQVTDHLKGVAKGIN-VRVVPIVGGMSTEKQERLLKARPEVVVG 320
+ + L++ PTRELA+QVT HL+ + K ++ +R+ IVGG+S +KQ RLL+ P+++V
Sbjct: 177 RNRVYGLVLVPTRELAIQVTQHLRALMKYVDYIRIETIVGGISVDKQLRLLRRCPDILVA 236
Query: 321 TPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG-SNKGQ 379
TPGRLW + GE HL+ LH+++ V+DEADRMIE HF +L++I + L ++ +N+G+
Sbjct: 237 TPGRLWHFIQQGEPHLLTLHSVNVVVVDEADRMIEANHFDDLRAIFNWLHSSSSFNNEGK 296
Query: 380 SEQTQNCVTV-------------------SSLQRKKRQTLVFSATIALSADFRKKLKHGS 420
E+ ++ + + + R +RQTL+FSAT+ K GS
Sbjct: 297 EEEQEDTTHLKKTLNLKRKHKLIEMSDHSTDMNRVQRQTLIFSATLTFVHSGALKPGTGS 356
Query: 421 LKSKQSVNGLNS------IETLSERAGMRANVAIVDLTN-------------MC--VLAN 459
K N N+ + L E G++ + ++DL++ +C +
Sbjct: 357 KNHKLLPNNKNTMTKKIKLAVLREMFGLKKSAKVIDLSSNHSTDQSVSNPGLICKSTCPD 416
Query: 460 KLEESFIEC-KEEDKDAYLYYILSV--------HGQGRTIVFCTSIAALRHISSLLK-IL 509
L E + C +E KD L++ ++ + R ++F S + +R ++ +L+ +L
Sbjct: 417 TLSECRLLCPSQESKDIRLFWFIAFGRHLGSSEYSNRRCLIFLNSKSGVRRLAGVLRQLL 476
Query: 510 GIDVWT------------LHAQMQQRARLK 527
D ++ LHA M Q+ RL+
Sbjct: 477 SPDAFSVSGYPSLQYVNVLHADMVQKQRLR 506
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
N E W+ L L ++K++ + PTPIQ A IP A H DV+G+A TGSG
Sbjct: 9 NSQGCRVEVMGWDSLNLPDYIVKALSDCGLENPTPIQTAAIPPALHGFSDVLGSAPTGSG 68
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
KTLAFG+P++ ++ + ++ E++ +
Sbjct: 69 KTLAFGIPLVSKVFSLKTLQSQTCEEESK 97
>gi|418720312|ref|ZP_13279510.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. UI 09149]
gi|418738362|ref|ZP_13294757.1| DEAD/DEAH box helicase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410743290|gb|EKQ92033.1| DEAD/DEAH box helicase [Leptospira borgpetersenii str. UI 09149]
gi|410745855|gb|EKQ98763.1| DEAD/DEAH box helicase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 513
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPAIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L+ + VLDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPI------------------------DRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|335998488|ref|ZP_08564399.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
gi|335348343|gb|EGM49849.1| ATP-dependent RNA helicase [Lactobacillus ruminis SPM0211]
Length = 506
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 175/359 (48%), Gaps = 73/359 (20%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
F +NEL L L+K+I R F+E TPIQ+A IP G DVIG A+TG+GKT AFGLP
Sbjct: 9 FLKFNELGLEEDLLKAIKRSGFEEATPIQEATIPLVL-AGIDVIGQAQTGTGKTAAFGLP 67
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I+Q + D EE H++A++++PTRELA+Q + L + K
Sbjct: 68 ILQHV------------DVKEE--------HIQAIVVSPTRELAIQTQEELYRLGKDKRA 107
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+V + GG +Q +LLK P+++VGTPGRL + ++ + V+L + VLDEAD M
Sbjct: 108 KVQVVYGGADIRRQIKLLKHVPQILVGTPGRLLDHIN---RKTVDLSHVKTLVLDEADEM 164
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G ++++II +P ++RQTL+FSAT+ +
Sbjct: 165 LDMGFLEDIEAIIKNVP------------------------EERQTLLFSATMPKAI--- 197
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+ + + Q VN ++A DL +++ F++ +E +K
Sbjct: 198 RSIGEKFMHEPQVVN-------------IKAKELTTDL---------VDQYFVKAREYEK 235
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+ IL V TIVF + + +S L+ G + +H + Q+ R+ + +
Sbjct: 236 FDIMTRILDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLTQQRRMNILKKF 294
>gi|237743040|ref|ZP_04573521.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
gi|229433600|gb|EEO43812.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
Length = 528
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFIEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|149713746|ref|XP_001501494.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Equus caballus]
Length = 455
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 171/372 (45%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P + + V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPTEVPQPAVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|116329398|ref|YP_799118.1| ATP-dependent RNA helicase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330001|ref|YP_799719.1| ATP-dependent RNA helicase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116122142|gb|ABJ80185.1| ATP-dependent RNA helicase (superfamily II) [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|116123690|gb|ABJ74961.1| ATP-dependent RNA helicase (superfamily II) [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
Length = 513
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPAIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L+ + VLDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------EDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|374336577|ref|YP_005093264.1| DEAD/DEAH box helicase [Oceanimonas sp. GK1]
gi|372986264|gb|AEY02514.1| DEAD/DEAH box helicase [Oceanimonas sp. GK1]
Length = 458
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 172/357 (48%), Gaps = 65/357 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L L+ L+++I+ + +PTPIQ+ IP +G D++ A+TG+GKT FGLP++
Sbjct: 2 SFASLGLNDNLVQAIHECGYTQPTPIQQQAIPLVL-KGGDLLAGAQTGTGKTAGFGLPML 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
QRL E + + A AP +RAL++TPTRELA QV ++L+ AK ++R
Sbjct: 61 QRLSETKARPL---------ANGRAP---VRALVLTPTRELAAQVEENLRAYAKHTDLRT 108
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ + GG+S Q + L + ++VV TPGRL + +S + ++L + VLDEADRM++
Sbjct: 109 LVMFGGVSINPQMKALGRKVDIVVATPGRLLDHVS---QRSIDLSRVEMLVLDEADRMLD 165
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G R+++ I+ +LP K+RQ L+FSAT +
Sbjct: 166 MGFIRDIRRILALLP------------------------KQRQNLLFSATFS-------- 193
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I+TL+E + +++ A + + F E + K A
Sbjct: 194 ---------------DEIKTLAE--DLLHQPEHIEVARRNATAETISQRFFEVDKGRKRA 236
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L Y + H + +VF + ++ L G+ +H Q AR K S+
Sbjct: 237 LLSYHIGHHNWRQVLVFTRTKHGANRLAEQLDKDGLPAMAIHGNKSQGARTKALSEF 293
>gi|398343323|ref|ZP_10528026.1| DEAD/DEAH box helicase [Leptospira inadai serovar Lyme str. 10]
Length = 554
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 169/353 (47%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L KSI + F E TPIQ+ IP +GKD+ G A+TG+GKT+AF +PI+
Sbjct: 3 FEELNLEPSLQKSIEKAGFVELTPIQEKAIPHGI-EGKDITGLAQTGTGKTVAFLVPIIH 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L + K + LI+ PTREL +Q+++ + + K + RVV
Sbjct: 62 NILTKGIKG-------------------VSTLILAPTRELVIQISEEAEKLLKYTDYRVV 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI+GG + Q R L+A ++V TPGRL +L GG +L + FFVLDEADRM++
Sbjct: 103 PIIGGTDYKSQNRDLQALNGIIVATPGRLIDLARGG---TADLDKVEFFVLDEADRMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ ++ C R ++QTL+FSAT+++ +L
Sbjct: 160 GFINDIRWLL-----------------HKC-------RNRKQTLLFSATLSVEV---MRL 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ + + +N + ++ER +++ + E+K Y
Sbjct: 193 AYRFMNDPVEIQ-INPDKLITER---------------------IDQKLVHLGREEKLPY 230
Query: 477 LY-YILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKL 528
+ IL G+ I+F A + I L+ GI V + + + Q+ RL+L
Sbjct: 231 MVNAILDAEVDGQGIIFTNFKANIPRIVQTLRRYGIPVTGISSDLDQKKRLRL 283
>gi|260495553|ref|ZP_05815678.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
gi|260196895|gb|EEW94417.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
Length = 528
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPEEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|367049970|ref|XP_003655364.1| hypothetical protein THITE_2119013 [Thielavia terrestris NRRL 8126]
gi|347002628|gb|AEO69028.1| hypothetical protein THITE_2119013 [Thielavia terrestris NRRL 8126]
Length = 755
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 157/354 (44%), Gaps = 72/354 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L L L++++ + F EPTPIQ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 233 SFLDLPLSRPLLRALTSVGFDEPTPIQAKTIPIAL-MGKDVVGGAVTGSGKTAAFMVPIL 291
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RLL K R +I+TPTRELA+Q +A+ +++
Sbjct: 292 ERLLHRPNKVPTT-----------------RVVILTPTRELAMQCHAVATKLARFTDIKF 334
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
GG+S + QE L+ RP+VV+ TPGR + M V+ + VLDEADRM+E
Sbjct: 335 CLAAGGLSRKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD--RVEILVLDEADRMLE 392
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 393 DGFADELNEILTTLP------------------------KSRQTMLFSATMTSSVD---- 424
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KEED 472
N I R G+ V I+ + + A L + F+ +EE
Sbjct: 425 ---------------NLI-----RVGLNKPVRIM-VDSQKATAGTLTQEFVRLRPGREEK 463
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ YL +I R I+F + +LG+ LH M Q R+
Sbjct: 464 RMGYLVHICKTLYTKRVIIFFRQKKVAHRARIIFGLLGLSCAELHGSMSQTQRI 517
>gi|406973607|gb|EKD96982.1| hypothetical protein ACD_23C01154G0002, partial [uncultured
bacterium]
Length = 475
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 168/352 (47%), Gaps = 65/352 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
A+ +L+L L +++ + ++ TPIQ IP QG+DV+GAA+TG+GKT AF LP+M
Sbjct: 2 AFAQLQLADPLARAVAEMGYETMTPIQAQAIPVVL-QGRDVMGAAQTGTGKTAAFALPLM 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
QR+L K E A + +RAL++ PTRELA+QV + ++ K N+R
Sbjct: 61 QRML------------KHENASTSPARHPVRALVLLPTRELAVQVAEQVELYGKYTNLRS 108
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GGM + Q LK EV+V TPGRL + + K+ V L+ + + VLDEADRM++
Sbjct: 109 AVVFGGMDMKPQTIELKKGVEVLVATPGRLLDHIEA--KNCV-LNQVEYVVLDEADRMLD 165
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ I+ LP K+R TL+FSAT + K+
Sbjct: 166 IGFLPDLQRILSYLP------------------------KQRTTLLFSATFSPEI---KR 198
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L L+ ++ R+N A A+ +E+ F + EDK
Sbjct: 199 LASSYLQDPVTIE------------VARSNAA----------ASTVEQHFYSVEGEDKRH 236
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L+ IL G + VF S ++ L+ G+ LH Q RLK
Sbjct: 237 ALHQILRQRGIKQAFVFVNSKLGCARLARSLEHEGLKTTALHGDKSQDERLK 288
>gi|355683299|gb|AER97081.1| DEAD box polypeptide 47 [Mustela putorius furo]
Length = 454
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 170/373 (45%), Gaps = 74/373 (19%)
Query: 156 GPD--DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
PD D+ E A E + +L + +L ++ +L + +PT IQ IP A QG
Sbjct: 2 APDEYDSATEAPQPAGQEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QG 60
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
+D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPT
Sbjct: 61 RDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPT 100
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q+++ + + I V+ IVGG+ + Q L +P V++ TPGRL + + +
Sbjct: 101 RELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHVIIATPGRLIDHLENTK 160
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L L + V+DEADR++ E+ I+ ++P
Sbjct: 161 GF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP----------------------- 195
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 196 -RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV----------------- 234
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
KL++ ++ + KD YL YIL+ I+FC++ + + LL+ LG
Sbjct: 235 -----EKLQQYYLFIPSKFKDTYLVYILNELAGNSFIIFCSTCNNTQRTALLLRNLGFTA 289
Query: 514 WTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 290 IPLHGQMSQSKRL 302
>gi|339243587|ref|XP_003377719.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
gi|316973448|gb|EFV57036.1| ATP-dependent RNA helicase DBP8 [Trichinella spiralis]
Length = 563
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 177/365 (48%), Gaps = 87/365 (23%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ ++L L L++ + EP+P+Q CIP GKD IG ++TG+GKTLAF +PI+
Sbjct: 106 SLHDLGLSSWLVEQCAVMGIVEPSPVQLNCIPEIL-IGKDAIGCSKTGTGKTLAFAIPII 164
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
QRL E+ P G + AL++TP+RELA Q+ + + + K + +R
Sbjct: 165 QRLSED-------------------PYG-IYALVLTPSRELAFQIGEQFQVLGKPLGLRT 204
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
+VGG +Q + +P +++ TPGRL + ++S +++ H + FFVLDEADR++
Sbjct: 205 SIVVGGRDMIEQANEIANQPHILIATPGRLADHILSRSDENW--FHKIKFFVLDEADRLL 262
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ + +L++II+ LP K+RQTL+FSATI D
Sbjct: 263 DGQYDLQLETIIEKLP------------------------KERQTLLFSATI---TDALC 295
Query: 415 KLKHGSLK-----SKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
+L+ S+K +QS V + LE+ ++ C
Sbjct: 296 RLQELSVKKPFFWQEQSCT---------------------------VTVDTLEQRYVLCP 328
Query: 470 EEDKDAYLYYILSV----HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+ KDAY+ Y++ + + Q ++F S + ++ + LG V LH+ + QR R
Sbjct: 329 KSVKDAYVTYVVKLFTDKNPQSSVLIFSHSCYECQALTLMFADLGFKVGALHSMISQRER 388
Query: 526 LKLFS 530
L F+
Sbjct: 389 LSSFN 393
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 157/342 (45%), Gaps = 74/342 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++++ ++ K PT IQ IP A +GKD+IG A TGSGKT AF LPI+Q+L EE
Sbjct: 26 LLQALEQVNHKVPTDIQTEVIPHAL-EGKDIIGVASTGSGKTAAFALPILQKLWEE---- 80
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A ++ PTRELA Q++ + + + VR IVGG+ T
Sbjct: 81 ---------------PKG-LFACVLAPTRELAYQISQQFESLGSDMGVRCAVIVGGVPTV 124
Query: 306 KQERLLKARPEVVVGTPGR-LWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQS 364
Q L +P VVV TPGR LW L E L L F VLDEADR+++ + +
Sbjct: 125 PQAVALAKKPHVVVATPGRLLWHLQ---ETKGFGLANLKFLVLDEADRLLDMDFGQVIDD 181
Query: 365 IIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSK 424
I+ ++P K+R T +FSAT+ KL+ SLK+
Sbjct: 182 ILKVIP------------------------KQRTTYLFSATMTSKV---AKLQRASLKNP 214
Query: 425 QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVH 484
V +T+S L + ++ +DKD L Y+++
Sbjct: 215 VRVEVAGKYQTVS----------------------TLLQYYLFIPLKDKDVNLVYLVNAL 252
Query: 485 GQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
Q I+F ++ ++ +L+ LG LH Q+ Q RL
Sbjct: 253 AQNSIIIFTRTVHDAARLTIVLRTLGFSAVPLHGQLSQSQRL 294
>gi|335308097|ref|XP_003361101.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Sus
scrofa]
Length = 473
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 170/368 (46%), Gaps = 76/368 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
+A + V E E T + +L + +L ++ +L + +PT IQ IP A QG+D+IG
Sbjct: 65 EAPQTAVEEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIG 119
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+ LLE ++ L AL++TPTRELA
Sbjct: 120 LAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRELAF 159
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + +
Sbjct: 160 QISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKG--FN 217
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L + V+DEADR++ E+ I+ ++P + R+
Sbjct: 218 LRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRK 253
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 254 TFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV---------------------- 288
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG LH
Sbjct: 289 EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 348
Query: 519 QMQQRARL 526
QM Q RL
Sbjct: 349 QMSQSKRL 356
>gi|427789491|gb|JAA60197.1| Putative atp-dependent rna helicase ddx47 [Rhipicephalus
pulchellus]
Length = 465
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 176/376 (46%), Gaps = 72/376 (19%)
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
+A P+ + + V E S E + L + +L ++ +L++K PT IQ+ +P A
Sbjct: 1 MAAPTEPEISTDAKVANEEKSEENVTFKSLGVVDVLCEACEQLKWKAPTKIQREALPVAL 60
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
QG+DVIG AETGSGKT +F LPI+Q LLE ++ L AL++
Sbjct: 61 -QGRDVIGLAETGSGKTASFALPILQALLETPQR--------------------LFALVL 99
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
TPTRELA Q+++ + + I V+ IVGG+ Q L +P V++ TPGRL + +
Sbjct: 100 TPTRELAFQISEQFEALGASIGVKSAVIVGGIDMMTQALTLAKKPHVIIATPGRLVDHLE 159
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ L +L + V+DEADR++ E+ I+ ++P
Sbjct: 160 NTKGF--NLKSLKYLVMDEADRILNMDFEEEVDKILRVIP-------------------- 197
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
++R+T ++SAT+ +KL+ SL+ V + +T+
Sbjct: 198 ----RERRTYLYSATMTKKV---QKLQRASLRDPVKVEVSSKYQTV-------------- 236
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
KL + ++ + KD YL ++L+ +VFC++ + + + LL+ LG
Sbjct: 237 --------EKLMQYYLFIPAKFKDVYLVHLLNELAGNSFMVFCSTCSNTQRTALLLRNLG 288
Query: 511 IDVWTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 289 FTAIPLHGQMGQAKRL 304
>gi|145255454|ref|XP_001398969.1| ATP-dependent rRNA helicase RRP3 [Aspergillus niger CBS 513.88]
gi|143462251|sp|A2RB17.1|RRP3_ASPNC RecName: Full=ATP-dependent rRNA helicase rrp3
gi|134084560|emb|CAK43313.1| unnamed protein product [Aspergillus niger]
Length = 467
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 71/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L ++ + +K PTPIQ+ IP A +G+D+IG AETGSGKT AF LPI+Q
Sbjct: 50 FKELGIIEQLCEACETMGYKAPTPIQRESIPLAL-KGRDLIGLAETGSGKTAAFALPILQ 108
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E+ + L++ PTRELA Q++ + + + VR
Sbjct: 109 ALMEKPQP--------------------FFGLVLAPTRELAYQISKSFESLGASMGVRSC 148
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q L +P ++V TPGRL + + + L L + V+DEADR+++
Sbjct: 149 VIVGGMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGF--SLRNLKYLVMDEADRLLDM 206
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
L I+ +LP ++R+T +FSAT++
Sbjct: 207 DFGPLLDKILKVLP------------------------RERRTFLFSATMS--------- 233
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +E+L +RA + + + T+ + L +S++ ++ KD Y
Sbjct: 234 --------------SKVESL-QRASLSNPLRVSVSTSKYQTVSTLLQSYLFIPQKHKDLY 278
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L Y+L+ TI+F ++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 279 LVYLLNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARL 328
>gi|417401266|gb|JAA47524.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 455
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 172/379 (45%), Gaps = 80/379 (21%)
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
EE + + P A EE E + +L + +L ++ +L + +PT IQ IP
Sbjct: 5 EEPGSATEAPQPALEE--------EEAKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIP 56
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
A QG+D+IG AETGSGKT AF LPI+ LLE ++ L A
Sbjct: 57 LAL-QGRDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFA 95
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
L++TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL +
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 155
Query: 328 LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCV 387
+ + L L + V+DEADR++ E+ I+ ++P
Sbjct: 156 HLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP----------------- 196
Query: 388 TVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVA 447
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 -------RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV----------- 235
Query: 448 IVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLK 507
KL++ +I + KD YL YIL+ ++FC++ + + LL+
Sbjct: 236 -----------EKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLR 284
Query: 508 ILGIDVWTLHAQMQQRARL 526
LG LH QM Q RL
Sbjct: 285 NLGFTAIPLHGQMNQSKRL 303
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 168/375 (44%), Gaps = 79/375 (21%)
Query: 160 AEEELVNEAEISTEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
A E+ V E++ ++ A + L L +++ + + F PTPIQ+ IP A GKDV+G
Sbjct: 280 APEDQVTESKSTSGAPASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVAL-LGKDVVG 338
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTREL 276
A TGSGKT AF +PI++RLL Y P+ R I+ PTREL
Sbjct: 339 GAVTGSGKTGAFIVPILERLL-------------------YRPRKVPTSRVAILMPTREL 379
Query: 277 ALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL 336
A+Q + +A ++ +VGG S +QE +LK RP+V++ TPGR + M
Sbjct: 380 AVQCYNVATKLATFTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFT 439
Query: 337 VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK 396
V+ TL VLDEADRM+E+G EL I+ +P K
Sbjct: 440 VD--TLEILVLDEADRMLEDGFAEELNEILTTIP------------------------KS 473
Query: 397 RQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMC 455
RQT++FSAT+ NS++ L R G+ V + VD
Sbjct: 474 RQTMLFSATMT-----------------------NSVDKLI-RVGLNKPVRLMVDSKKQT 509
Query: 456 VLANKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
V L + F+ + E+ + YL ++ R IVF + + ++G+
Sbjct: 510 V--GTLVQEFVRLRPGREDKRLGYLMFLCKTVYSNRVIVFFRQKKEAHRVRIVFGLMGLK 567
Query: 513 VWTLHAQMQQRARLK 527
LH M Q R+K
Sbjct: 568 AAELHGSMSQEQRIK 582
>gi|50419843|ref|XP_458454.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
gi|74659385|sp|Q6BTL5.1|DRS1_DEBHA RecName: Full=ATP-dependent RNA helicase DRS1
gi|49654120|emb|CAG86536.1| DEHA2C17534p [Debaryomyces hansenii CBS767]
Length = 771
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 180/374 (48%), Gaps = 77/374 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
D EE + ++ T F + L+L ++K + +L + +P+PIQ ACIP A GKD++
Sbjct: 245 DEEEATTAKKQLHTTFQS---LQLSRPVLKGLSQLGYTKPSPIQSACIPIALL-GKDIVA 300
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKT A+ +PI++RLL K AK+ R +++ PTRELA+
Sbjct: 301 GAVTGSGKTAAYMIPIIERLL---YKPAKI--------------SSTRVIVLAPTRELAI 343
Query: 279 QVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
QV D K + + + N+ VGG++ +QE+ LK RP++V+ TPGRL + + +
Sbjct: 344 QVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSI 403
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ +L V+DEADRM++ G EL I+ ++P R KR
Sbjct: 404 D--SLEVLVIDEADRMLDEGFQAELTEILSLIP-----------------------RHKR 438
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
QTL++SAT+ I+ L + + + ++D +
Sbjct: 439 QTLLYSATMN-----------------------TKIQDLIQLSLQKPVRVMIDPPKSAAI 475
Query: 458 ANKLEESFIECKEED--KDAYLYYIL-SV--HGQGRTIVFCTSIAALRHISSLLKILGID 512
KL + F+ ++ D K A L+ ++ SV Q R +VF + + +L +LG+
Sbjct: 476 --KLVQEFVRIRKRDHLKPALLFQLIKSVDPSQQNRIVVFVARKESAHKLRIILGLLGMR 533
Query: 513 VWTLHAQMQQRARL 526
V LH + Q RL
Sbjct: 534 VSELHGSLTQEQRL 547
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 2
[Anolis carolinensis]
Length = 399
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 169/364 (46%), Gaps = 76/364 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
+ E+E VN AE + F EL + +L ++ +L +K PT IQ IP A QG+D+IG
Sbjct: 4 EMEQEEVN-AEAAKSF---KELGVTEVLCEACDQLGWKTPTKIQVESIPLAL-QGRDIIG 58
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+Q LLE ++ AL++TPTRELA
Sbjct: 59 LAETGSGKTGAFALPILQALLETPQR--------------------FFALVLTPTRELAF 98
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGG+ Q L +P V++ TPGRL + + +
Sbjct: 99 QISEQFEALGSSIGVQTAVIVGGIDMMAQSLALAKKPHVIIATPGRLIDHLENTKGF--N 156
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L + V+DEADR++ E+ I+ ++P + R+
Sbjct: 157 LRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRK 192
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T +FSAT+ +KL+ +LK + +T+
Sbjct: 193 TFLFSATMTKKV---QKLQRAALKDPVKCAVSSKYQTV---------------------- 227
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ ++ + KD+YL YIL+ ++FC++ + + LL+ LG LH
Sbjct: 228 EKLQQYYVFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 287
Query: 519 QMQQ 522
QM Q
Sbjct: 288 QMNQ 291
>gi|254302223|ref|ZP_04969581.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|422340165|ref|ZP_16421119.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148322415|gb|EDK87665.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|355370105|gb|EHG17493.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 529
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLEHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+ D K+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATM---PDEIMKV 198
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K E +++ DLT E+ + E E DK
Sbjct: 199 AKTHMKE-------------YEVLAVKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|396459541|ref|XP_003834383.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
gi|312210932|emb|CBX91018.1| hypothetical protein LEMA_P060520.1 [Leptosphaeria maculans JN3]
Length = 516
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 156/334 (46%), Gaps = 70/334 (20%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L+F PTPIQ IP A +G+DVIG AETGSGKT AF LPI+Q LL++ +
Sbjct: 105 LKFTTPTPIQTQAIPLAL-EGRDVIGLAETGSGKTAAFVLPILQALLDKPQA-------- 155
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L LI+ PTRELA Q+ + + INV+ +VGGM Q L
Sbjct: 156 ------------LFGLILAPTRELAYQIAQQVDALGSIINVKCATLVGGMDMVPQAIALS 203
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
RP +VV TPGRL + + + L L + VLDEADR+++ L I+ +LP
Sbjct: 204 KRPHIVVATPGRLLDHLENTKG--FSLKHLKYMVLDEADRLLDLDFGPVLDKILRVLP-- 259
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
R R T +FSAT++ +
Sbjct: 260 ---------------------RDGRHTYLFSATMS-----------------------SK 275
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA ++ V + ++ + + L + ++ + KD YL ++L+ + TI+F
Sbjct: 276 VESL-QRAALQNPVRVSISSSSHQVVSTLLQRYLFIPHKHKDLYLIHLLTDNIGHPTIIF 334
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ I+ LL+ LG LH Q+ Q ARL
Sbjct: 335 TRTVNETERIAILLRALGFGAIPLHGQLSQSARL 368
>gi|344303887|gb|EGW34136.1| hypothetical protein SPAPADRAFT_59553 [Spathaspora passalidarum
NRRL Y-27907]
Length = 431
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 171/354 (48%), Gaps = 65/354 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++++L + L +S+ ++ +PTPIQ ACIPA +G D IG A+TGSGKT+AF
Sbjct: 2 SFSDLGVAKWLSESLIAMKIHQPTPIQTACIPAIL-KGHDCIGGAKTGSGKTIAF----- 55
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
AA ML D + P+G + LI+TPTRELALQ+ + + +N++V
Sbjct: 56 ---------AAPMLTDWSAD-----PRG-IFGLILTPTRELALQIAEQFAALGSNMNIKV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
IVGG Q L+ P V+ TPGRL + +++ GE+ + L + + VLDEADR++
Sbjct: 101 SVIVGGEDIVTQALALQRNPHFVIATPGRLADHVLNSGEETVAGLKRVKYLVLDEADRLL 160
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
N +L+ ++P + + RQTL+F+AT+ D +
Sbjct: 161 SNSFSSDLERCFKVIPSS----------------------ENRQTLLFTATV---TDAVR 195
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
LK K + ++ +ET+ + A + N L ++ K+
Sbjct: 196 ALKDAPAKEGKLPVFMHEVETVDKVA----------------IPNSLSIKYVFVPSYVKE 239
Query: 475 AYLYYILSV--HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
AYL+ ILS+ + ++F I L+ L V +LH+QM+Q R+
Sbjct: 240 AYLHSILSLEQYKDKTAVIFVNRTITAEVICRTLRKLEFRVASLHSQMRQTERI 293
>gi|336399893|ref|ZP_08580692.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
gi|336163533|gb|EGN66456.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
Length = 528
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFENLDHIQAIVLTPTRELALQVAEEMNSLSISKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPDEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|170590083|ref|XP_001899802.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158592721|gb|EDP31318.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 782
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 76/352 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W + L L K I + F++PTPIQ+ IP GKD++ + TGSGKT AF +PI+Q
Sbjct: 33 WQTIGLDHTLFKGIQKKGFRQPTPIQRKAIPIII-DGKDIVAMSRTGSGKTAAFVIPILQ 91
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L K+ + KG +RALII PTRELA+Q +K + + +R
Sbjct: 92 KL--------KVRDMKG-----------IRALIIEPTRELAMQTFTVVKELGRFTGLRCA 132
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG E+Q + + +P++V+ TPGRL ++ + L + V DEADR+ E
Sbjct: 133 VLVGGDRIEEQFQTVHEKPDIVIATPGRLLHVIVEMD---FRLSAVQVIVFDEADRLFEM 189
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +L ++ LP + RQTL+FSAT+
Sbjct: 190 GFAEQLHEVLKRLP------------------------ENRQTLLFSATLP--------- 216
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIECKEEDKDA 475
SI S +AG+ V + +DL +++KL F+ C+ +DK A
Sbjct: 217 --------------KSIIAFS-KAGLSDPVLVRLDLAEK--ISDKLSMMFLYCRTDDKLA 259
Query: 476 YLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++ V +TIVFC ++ + +++++ GID L++Q+ AR
Sbjct: 260 AFLHLAREVVAANEQTIVFCATMKHVEYLAAVAGKAGIDCVVLYSQLDSVAR 311
>gi|150401787|ref|YP_001325553.1| DEAD/DEAH box helicase [Methanococcus aeolicus Nankai-3]
gi|150014490|gb|ABR56941.1| DEAD/DEAH box helicase domain protein [Methanococcus aeolicus
Nankai-3]
Length = 529
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 164/343 (47%), Gaps = 82/343 (23%)
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
FK PTPIQK IP DV+G A+TG+GKT AFGLPI+++L E
Sbjct: 24 FKHPTPIQKKAIPMLLDGDYDVVGQAQTGTGKTAAFGLPIIEKL---------------E 68
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
+K ++A+I+TPTRELALQV+D L + N+++V + GG ++Q R LK
Sbjct: 69 NTDK-----EVQAIILTPTRELALQVSDELNSLRGSKNLKIVAMYGGQPIQEQIRQLKKG 123
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNG 374
VVVGTPGR+ + + G + LHT+ +FVLDEAD M++ G +++ D+L TN
Sbjct: 124 VNVVVGTPGRIMDHLKRGT---LRLHTIKYFVLDEADEMLDMGFIDDIE---DILRYTNP 177
Query: 375 SNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI-----ALSADFRKKLKHGSLKSKQSVNG 429
K L+FSAT+ L+ + K K S+KS
Sbjct: 178 DKK---------------------MLLFSATLPRRIMGLAKRYMGKYKVISVKS------ 210
Query: 430 LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRT 489
E L+ T+M +E+ + E + DK L ++ ++ +
Sbjct: 211 ----ENLT--------------TDM------VEQVYYEVRSSDKFEALCRVIDINKEFYG 246
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
IVFC + A + I++ L G LH + Q R K+ ++
Sbjct: 247 IVFCKTRAEVNDIANKLSAKGYFAEGLHGDIAQNQREKILNRF 289
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 178/385 (46%), Gaps = 71/385 (18%)
Query: 142 KKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPI 201
K T E+S + +E N+ + ++ +L + L+++ L +K PTPI
Sbjct: 28 KPAPTKEQSPEPAPPASTTDEAAANQDDAPVAKKSFADLGVVESLVEATEALGYKHPTPI 87
Query: 202 QKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAP 261
Q+ IP A G+DVIG AETGSGKT AF LP++Q LLE+ P
Sbjct: 88 QEKSIPLAL-AGRDVIGLAETGSGKTAAFALPVLQALLEK-------------------P 127
Query: 262 KGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGT 321
G L A+++ PTRELA Q+ + + IN+R IVGG+ +Q L +P VVV T
Sbjct: 128 SG-LFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMVQQAIALGKKPHVVVAT 186
Query: 322 PGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSE 381
PGRL + + + L +L + VLDEADR+++ + I+ +P
Sbjct: 187 PGRLLDHLEKTKG--FSLRSLKYLVLDEADRLLDMDFGPSIDKILKFIP----------- 233
Query: 382 QTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAG 441
++R T +FSAT++ + +E+L +RA
Sbjct: 234 -------------RERHTYLFSATMS-----------------------SKVESL-QRAS 256
Query: 442 MRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRH 501
++ + +N + + L ++F+ KD Y ++++ TIVF ++ +
Sbjct: 257 LKDPARVSVQSNGYQVVSTLLQNFLFIPHALKDVYCVHLINSFIGQTTIVFLRTVHDTQR 316
Query: 502 ISSLLKILGIDVWTLHAQMQQRARL 526
++ LL+ LG LH Q+ Q ARL
Sbjct: 317 LAILLRTLGFSALPLHGQLSQSARL 341
>gi|257091933|ref|YP_003165574.1| DEAD/DEAH box helicase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044457|gb|ACV33645.1| DEAD/DEAH box helicase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 474
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 177/367 (48%), Gaps = 67/367 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E+ LHP ++K++ + EPTP+Q+ IP A +G+D++ +++TGSGKT AF LP +
Sbjct: 3 FAEIGLHPAILKALTDSGYSEPTPVQQQAIPPAI-EGRDLMVSSQTGSGKTAAFMLPALH 61
Query: 237 RL-LEEREKAAKMLEDKGEEAEKYAPKGH---------LRALIITPTRELALQVTDHLKG 286
R L+ER A ++G P+GH R L++TPTRELALQVT +
Sbjct: 62 RFALQERPAAVPRPSERGAAR----PRGHDRQRFQAAQPRMLVLTPTRELALQVTAATEK 117
Query: 287 VAKGIN-VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
+ ++ VR V I+GGM KQ LL PE++V TPGRL + MS G+ ++ L
Sbjct: 118 YGRQLHHVRAVAILGGMPYPKQMELLGRNPEILVATPGRLIDHMSSGK---IDFSQLQIL 174
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
VLDEADRM++ G +++ I+ P GS RQTL+FSAT
Sbjct: 175 VLDEADRMLDMGFIEDIERIVAATP---GS---------------------RQTLLFSAT 210
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
+ + G L + + RA +R VD T+ + F
Sbjct: 211 LDGTV--------GELAQRMT------------RAALRIQ---VDATSARHDNIEQRMHF 247
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++ K+ L ++L + +VF + +S L + G++ LH M Q AR
Sbjct: 248 VDDLAH-KNRLLDHLLRDATIDQALVFTATKRDADTVSDRLNVAGLNAAALHGDMHQGAR 306
Query: 526 LKLFSQM 532
+ + M
Sbjct: 307 NRTLAAM 313
>gi|262066543|ref|ZP_06026155.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
gi|291379777|gb|EFE87295.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
Length = 528
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 164/349 (46%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKILKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ENFEHSDHIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTNDD---------------------KRMLFFSATMPPEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKIAKTHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|395538707|ref|XP_003771316.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Sarcophilus harrisii]
Length = 460
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 173/381 (45%), Gaps = 81/381 (21%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
T +S A S+ P +AE + E + +L + +L + +L +K PT IQ
Sbjct: 5 TEHDSAAGSSEPKEAEVQ---------ETKTFKDLGVTEVLCDACDQLGWKTPTKIQIEA 55
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A +G+D+IG AETGSGKT AF LPI+ LLE ++
Sbjct: 56 IPMAL-EGRDIIGLAETGSGKTGAFALPILNALLETPQR--------------------F 94
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
AL++TPTRELA Q+++ + + I V IVGG+ + Q L +P V++ TPGRL
Sbjct: 95 FALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKPHVIIATPGRL 154
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L L + V+DEADR++ E+ I+ ++P
Sbjct: 155 IDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKLIP--------------- 197
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 198 ---------RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV--------- 236
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
KL++ ++ + KD+YL YIL+ +VFC++ + + L
Sbjct: 237 -------------EKLQQYYLFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALL 283
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ LG LH QM Q RL
Sbjct: 284 LRNLGFTAIPLHGQMSQNKRL 304
>gi|257867061|ref|ZP_05646714.1| helicase [Enterococcus casseliflavus EC30]
gi|257873396|ref|ZP_05653049.1| helicase [Enterococcus casseliflavus EC10]
gi|257877139|ref|ZP_05656792.1| helicase [Enterococcus casseliflavus EC20]
gi|257801117|gb|EEV30047.1| helicase [Enterococcus casseliflavus EC30]
gi|257807560|gb|EEV36382.1| helicase [Enterococcus casseliflavus EC10]
gi|257811305|gb|EEV40125.1| helicase [Enterococcus casseliflavus EC20]
Length = 507
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 167/359 (46%), Gaps = 85/359 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L L+ S+ R F+E TPIQ+A IP A GKDVIG A+TG+GKT AFGLP++
Sbjct: 3 FKDLELSNELLTSVERAGFEEATPIQEATIPLAL-AGKDVIGQAQTGTGKTAAFGLPML- 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
EK P H L+ L+I PTRELA+Q + L + K +RV
Sbjct: 61 --------------------EKIDPTNHQLQGLVIAPTRELAIQTQEELYRLGKDKKIRV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG +Q R LK RP +VVGTPGR+ + ++ +H ++L T+ VLDEAD M+
Sbjct: 101 QAVYGGADIGRQIRQLKDRPHIVVGTPGRMLDHIN---RHTLKLGTVETLVLDEADEMLN 157
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSA 410
G +++ II +P RQTL+FSAT+ +
Sbjct: 158 MGFLEDIEKIISQVPDV------------------------RQTLLFSATMPPAIKNIGV 193
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
F K+ +H +K+K+ + A+ +++ ++ K+
Sbjct: 194 KFMKEPEHVQIKAKE------------------------------MTADLIDQYYVRSKD 223
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+K + +L V TIVF + + ++ L+ G +H + Q+ R+ +
Sbjct: 224 YEKFDIMTRLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRMSVL 282
>gi|406603210|emb|CCH45247.1| ATP-dependent rRNA helicase RRP3 [Wickerhamomyces ciferrii]
Length = 488
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 169/356 (47%), Gaps = 78/356 (21%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+++ +L+L P L+++ L+F +PTPIQ IP +G+D+IG A+TGSGKT AF +P
Sbjct: 73 INSFKDLKLIPELLEACQALKFDKPTPIQAEAIPHGI-EGRDLIGLAQTGSGKTAAFAIP 131
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
I+Q L YA + A ++ PTRELA Q+ D + G+ +
Sbjct: 132 ILQALW-------------------YAQTPYF-ATVLAPTRELAYQIKDTFDALGSGMGL 171
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHL--VELHTLSFFVLDEAD 351
R V IVGGM +Q R L +P V+V TPGRL + + +HL L L F V+DEAD
Sbjct: 172 RSVCIVGGMDMMEQARDLMRKPHVIVATPGRLMDHL----EHLKGFSLRALKFLVMDEAD 227
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
R+++ L I ++P ++R T +FSAT+ D
Sbjct: 228 RLLDMEFGPVLDKIFKVIP------------------------RERTTYLFSATMTNKID 263
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
KL+ SL + V ++S+R + L +S + +
Sbjct: 264 ---KLQRASLTNPVKV-------SVSDRYST---------------VDTLIQSMMIVPDG 298
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLL-KILGIDVWTLHAQMQQRARL 526
K+ YL Y+L+ +G++I+ T A ++LL +ILG LH Q+ Q RL
Sbjct: 299 QKNTYLIYLLN-QFEGKSIIIFTRTCAHSQRTALLSRILGFSAVPLHGQLTQSQRL 353
>gi|238028205|ref|YP_002912436.1| ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
gi|237877399|gb|ACR29732.1| Putative ATP-dependent RNA helicase 2 [Burkholderia glumae BGR1]
Length = 480
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 68/358 (18%)
Query: 172 TEFDA-WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
T DA +++ L P ++K+I + +PTPIQ IP G+DV+GAA+TG+GKT +F
Sbjct: 7 TPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVL-SGRDVMGAAQTGTGKTASF 65
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAK 289
LPI+QRLL + +A +P H +RALI+TPTRELA QV ++ AK
Sbjct: 66 SLPIIQRLLPQANTSA-------------SPARHPVRALILTPTRELADQVAANVHSYAK 112
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+R + GG+ Q L+ E+++ TPGRL + + ++ L + VLDE
Sbjct: 113 HTALRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHV---QQKTANLGQVQMLVLDE 169
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALS 409
ADRM++ G +LQ I+++LP K RQTL+FSAT +
Sbjct: 170 ADRMLDMGFLPDLQRILNLLP------------------------KARQTLLFSATFSPE 205
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
KKL L + Q++ R+N ++T + +
Sbjct: 206 I---KKLAATYLTNPQTIE------------VARSNATATNVTQIVY----------DIA 240
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E DK A + ++ + IVFC S ++ LL+ G+ +H Q R++
Sbjct: 241 EGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQ 298
>gi|255935375|ref|XP_002558714.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583334|emb|CAP91344.1| Pc13g02750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 493
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 173/378 (45%), Gaps = 71/378 (18%)
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
E A ++ P+ + E +T + EL L L ++ ++ +K PTPIQ IP
Sbjct: 45 EPQATADDPNVKDATSETEPSATTAPKTFKELGLIDSLCEACDKMGYKAPTPIQSESIPL 104
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A QG+D+IG AETGSGKT +F LPI+Q L+E+ + L
Sbjct: 105 AL-QGRDIIGLAETGSGKTASFVLPILQALMEKPQS--------------------FFGL 143
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
++ PTRELA Q++ + + INVR +VGGM Q L +P ++V TPGRL +
Sbjct: 144 VLAPTRELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKPHIIVATPGRLLDH 203
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ + L +L F V+DEADR+++ L I+ +LP
Sbjct: 204 LENTKGF--SLRSLKFLVMDEADRLLDMDFGPILDKILKVLP------------------ 243
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
++R+T +FSAT++ + +E+L +RA + +
Sbjct: 244 ------RERRTFLFSATLS-----------------------SKVESL-QRASLSNPARV 273
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
++ L+++++ + KD YL Y+L I+F ++ + ++ LL+
Sbjct: 274 SISSSKYATVETLQQTYLLRPYKHKDIYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRG 333
Query: 509 LGIDVWTLHAQMQQRARL 526
LG LH QM Q ARL
Sbjct: 334 LGFGAIPLHGQMSQSARL 351
>gi|239606948|gb|EEQ83935.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ER-3]
gi|327350595|gb|EGE79452.1| ATP-dependent rRNA helicase RRP3 [Ajellomyces dermatitidis ATCC
18188]
Length = 482
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 160/340 (47%), Gaps = 71/340 (20%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L +K PTPIQ IP A QG+D+IG AETGSGKT AF LPI+Q L+E+ +
Sbjct: 74 LGYKSPTPIQAESIPLAL-QGRDLIGLAETGSGKTAAFALPILQALMEKPQS-------- 124
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
L LI+ PTRELA Q++ + + I+VR IVGGM Q L
Sbjct: 125 ------------LFGLILAPTRELAYQISGAFEALGSLISVRCAVIVGGMDMVPQAIALG 172
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P +VV TPGRL + + + L L + V+DEADR+++ L I+ +LP
Sbjct: 173 KKPHIVVATPGRLLDHLENTKG--FSLRNLKYLVMDEADRLLDLDFGPILDKILKVLP-- 228
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSAT++ +
Sbjct: 229 ----------------------RERRTYLFSATMS-----------------------SK 243
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA + + + ++ + L +S++ + KD YL Y+L+ + IVF
Sbjct: 244 VESL-QRASLSNPLRVSISSSKYQTVSTLLQSYLFIPHKYKDLYLVYLLNEYAGQSAIVF 302
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
++ + ++ LL+ LG LH Q+ Q +RL S+
Sbjct: 303 TRTVNETQRLAILLRALGFGAIPLHGQLSQSSRLGALSKF 342
>gi|152991450|ref|YP_001357172.1| DEAD-box ATP dependent DNA helicase [Nitratiruptor sp. SB155-2]
gi|151423311|dbj|BAF70815.1| ATP-dependent RNA helicase, DEAD-box family [Nitratiruptor sp.
SB155-2]
Length = 471
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 164/349 (46%), Gaps = 76/349 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ L P +MK+I + FKEP+PIQK IP GKD++G A TG+GKT AF LP++
Sbjct: 3 FSDFNLKPQIMKAIEQAGFKEPSPIQKEAIPVVL-AGKDMVGQAHTGTGKTAAFALPLLN 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
MLE GE + AL+I PTRELA QV+D + + K + ++
Sbjct: 62 -----------MLELDGE----------VEALVIVPTRELATQVSDEIFRLGKYLGIKTA 100
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG S +Q + A VVV TPGRL +L+ G+ +EL+ F VLDEAD M++
Sbjct: 101 TVYGGSSYSRQLNHI-ANAAVVVATPGRLLDLLKSGK---IELNP-KFVVLDEADEMLDM 155
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I + LP TN RQTL+FSAT+ + K+L
Sbjct: 156 GFLDDIKAIFNYLP-TN-----------------------RQTLLFSATMPQAI---KEL 188
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
L S + + +T V +++ + E ++D
Sbjct: 189 AQQILHSPE----------------------FISITKKEVTNVNIKQFYYVVDEHERDEA 226
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L +L ++I+FC + ++ L+ G LH MQQR R
Sbjct: 227 LIRLLDYKNPTKSIIFCRMKIEVDRLAQFLEAQGYSAKGLHGDMQQRQR 275
>gi|358056510|dbj|GAA97479.1| hypothetical protein E5Q_04157 [Mixia osmundae IAM 14324]
Length = 476
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 175/417 (41%), Gaps = 112/417 (26%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+++ L L P L +++ + ++PT +Q ACIP QG+D IG+A+TGSGKT+AF PI+
Sbjct: 2 SFDSLGLEPFLCRALDSMSIRKPTEVQAACIPPIL-QGRDCIGSAQTGSGKTIAFATPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q L E+ P G + AL++TPTRELA Q+ D + IN++
Sbjct: 61 QALAED-------------------PYG-IFALVLTPTRELAFQIADQFVALGTPINLQS 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+VGG+ Q L++RP VV+ TPGRL +LM + L F VLDEADRM+
Sbjct: 101 TVVVGGLDMMAQATALRSRPHVVIATPGRLVDLMRSNQNEF-SFARLRFLVLDEADRMLN 159
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
EL I+ LP K+RQTL+F+AT+
Sbjct: 160 PTFADELGYILAALP------------------------KERQTLLFTATV--------- 186
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ + ++ + +G + + + N L + ++ +D
Sbjct: 187 -----------TDAITELQQKTPESGKKEPFVHLAQAELATPEN-LRQLYVFIPTTVRDT 234
Query: 476 YLYYIL----SVHGQ-------------------------------------GRTIVFCT 494
YLY +L ++ GQ +TI+F +
Sbjct: 235 YLYALLKNMSALTGQHARPRKRVRVEPKKQPHRKHGKKPQPVQESDEEGEPLPQTILFAS 294
Query: 495 SIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM----ITWIRKRPKGDRGKD 547
+S +L LGI LH+ + QR RL S+ + + G RG D
Sbjct: 295 RCRLAAQLSVMLTELGIPNTALHSHLTQRDRLASLSRFRASAVPLLVATDVGSRGLD 351
>gi|392531372|ref|ZP_10278509.1| ATP-dependent RNA helicase; cold shock [Carnobacterium
maltaromaticum ATCC 35586]
gi|414082690|ref|YP_006991393.1| DEAD/DEAH box helicase [Carnobacterium maltaromaticum LMA28]
gi|412996269|emb|CCO10078.1| DEAD/DEAH box helicase family protein [Carnobacterium
maltaromaticum LMA28]
Length = 541
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 174/354 (49%), Gaps = 75/354 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L P L++S+ RL F+E TPIQ+ IP A +GKDVIG A+TG+GKT AFGLP++Q
Sbjct: 3 FSELGLDPELLQSVERLGFEEATPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGLPMLQ 61
Query: 237 RL-LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ L+ R ++ L+I PTRELA+Q + L +++ VRV
Sbjct: 62 KIDLKNR---------------------AVQGLVIAPTRELAIQTQEELFRLSRDKKVRV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG +Q R LK +P +VVGTPGRL + ++ + ++L + VLDEAD M+
Sbjct: 101 QVVYGGADISRQIRSLKDQPHIVVGTPGRLLDHIN---RRTLKLDQVETLVLDEADEMLN 157
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ II +P K RQTL+FSAT+ D K+
Sbjct: 158 MGFLEDIEKIIKEVP------------------------KTRQTLLFSATM---PDAIKR 190
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ V +N E + +A ++ I ++ ++ CK+ +K
Sbjct: 191 I---------GVKFMNEPEHVRIQATAMSDSLI-------------DQYYVRCKDFEKFD 228
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+ +L V TIVF + + +S L++ G +H + Q+ R+ +
Sbjct: 229 IMTRLLDVQTPELTIVFGRTKRRVDELSKGLEMRGYRAEGIHGDLSQQKRMSVL 282
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + P+++K++ + +K PTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 3 FQDLNISPIILKALAKENYKTPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L E+ K +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 62 LL--------------NEQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRST 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+S + QER L+ ++++ TPGRL +L++ +KH V+L + VLDEADRM++
Sbjct: 108 AIVGGVSQKTQERALQQGADILIATPGRLIDLIN--QKH-VDLQHVEILVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
G +++ II +P K+QTL FSAT+
Sbjct: 165 GFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|30683736|ref|NP_193396.3| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
gi|75338927|sp|Q9ZRZ8.1|RH28_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 28
gi|3776027|emb|CAA09214.1| RNA helicase [Arabidopsis thaliana]
gi|110736657|dbj|BAF00292.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332658378|gb|AEE83778.1| DEAD-box ATP-dependent RNA helicase 28 [Arabidopsis thaliana]
Length = 789
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 70/359 (19%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+S D + EL L L+++ L +K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 220
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKGV 287
F LP ++RLL + PK R LI+TPTRELA+Q+ ++ +
Sbjct: 221 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQNL 261
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 262 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 319
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 320 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATMT 355
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
KL LN LS R LT V +
Sbjct: 356 EEVKELVKL------------SLNKPLRLSADPSARRPPG---LTEEVVRIRR------- 393
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+E +++A L + + + + I+F + A + L + G+ LH + Q RL
Sbjct: 394 TREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRL 452
>gi|384567061|ref|ZP_10014165.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
gi|384522915|gb|EIF00111.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
Length = 577
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 178/387 (45%), Gaps = 79/387 (20%)
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
VA++ DA E ++ A++ T A+ +L L P L+K++ L ++EPTPIQ+A IP
Sbjct: 2 VAITAESHDAPEGAIDTADLGTAV-AFGDLGLRPELLKALSDLGYEEPTPIQRAAIPPLL 60
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
+G DV+G A TG+GKT AF LP++ R+ + D+G E AL++
Sbjct: 61 -EGADVVGQAATGTGKTAAFSLPVLHRIADL---------DRGTEPS---------ALVL 101
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
PTRELA QV + + + VRVVP+ GG +Q R L++ +VVV TPGR + +S
Sbjct: 102 VPTRELAAQVCEAMYRYGHHLGVRVVPVYGGQPMGRQLRSLESGVDVVVATPGRALDHLS 161
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
G ++L L VLDEAD M++ G ++ +I+D P
Sbjct: 162 RGS---LDLSKLRMVVLDEADEMLDMGFAEDIDAILDRTP-------------------- 198
Query: 391 SLQRKKRQTLVFSATIA--LSADFRKKLKHG---SLKSKQSVNGLNSIETLSERAGMRAN 445
RQT++FSAT+ ++ R+ L+ L +S NG ++
Sbjct: 199 ----DDRQTMLFSATMPPRIAGMVRRYLREPRRIELSRAESTNGHSA------------- 241
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
+T L + K A L IL + T+VFC + + ++
Sbjct: 242 ----SITQTAYLVPR----------GHKPAALGRILDIEAPEATVVFCRTREEVDRLTET 287
Query: 506 LKILGIDVWTLHAQMQQRARLKLFSQM 532
+ G LH M Q R ++ ++
Sbjct: 288 MNGRGYRAEALHGGMDQNQRNRVVGRL 314
>gi|91782534|ref|YP_557740.1| ATP-dependent RNA helicase 2 [Burkholderia xenovorans LB400]
gi|91686488|gb|ABE29688.1| Putative ATP-dependent RNA helicase 2 [Burkholderia xenovorans
LB400]
Length = 491
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 67/364 (18%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+++ ++ +++ L P ++K++ + PTPIQ+ IP G+D++GAA+TG+
Sbjct: 1 MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVL-AGRDMMGAAQTGT 59
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 283
GKT +F LPI+QRLL + +A +P H +RALI+TPTRELA QV +
Sbjct: 60 GKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAAN 106
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 107 VQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 163
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 164 ILVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 199
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT S + KKL L+ Q++ S T A + +
Sbjct: 200 AT--FSGEI-KKLAATYLRDPQTIEVARSNST----------------------ATNVRQ 234
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
E E DK + ++ G + IVFC S +S L+ G+ +H Q
Sbjct: 235 IVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLSRSLERDGVIATAIHGDRSQN 294
Query: 524 ARLK 527
R++
Sbjct: 295 ERMQ 298
>gi|158514833|sp|A3LSN3.3|DRS1_PICST RecName: Full=ATP-dependent RNA helicase DRS1
Length = 741
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 179/374 (47%), Gaps = 77/374 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
D +E ++++ T F L+L ++K + +L + +P+PIQ A IP A G+D++
Sbjct: 209 DEKETKSAKSQVHTTFQT---LQLSRPVLKGLSQLGYTKPSPIQSASIPIALL-GRDIVA 264
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKT A+ +PI++RLL + K A R +++TPTRELA+
Sbjct: 265 GAVTGSGKTAAYMIPIIERLLYKPSKVAST-----------------RVIVLTPTRELAI 307
Query: 279 QVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
QV D K + + + N+ VGG++ +QE+ LK+RP+VV+ TPGRL + + +
Sbjct: 308 QVGDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKSRPDVVIATPGRLIDHIRNSPSFSI 367
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ +L V+DEADRM++ G EL I+ ++P + KR
Sbjct: 368 D--SLEVLVIDEADRMLDEGFQVELTEILSLIP-----------------------KNKR 402
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
QTL+FSAT+ I+ L + + R ++D
Sbjct: 403 QTLLFSATMN-----------------------TKIQDLIQLSLQRPVRIMIDPPKTA-- 437
Query: 458 ANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
A KL + F+ ++ D K A L+ + L Q R +VF + + + +L +LG+
Sbjct: 438 ATKLTQEFVRIRKRDHLKPALLFQLLKKLDPAQQSRIVVFVSRKESAHKLRIVLGLLGMK 497
Query: 513 VWTLHAQMQQRARL 526
V LH + Q RL
Sbjct: 498 VSELHGSLTQEQRL 511
>gi|170094690|ref|XP_001878566.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647020|gb|EDR11265.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 453
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 159/341 (46%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++++ ++ +K PT IQ +P A +G+D+IG A TGSGKT AF LPI+Q+L E+
Sbjct: 28 LLEALEQVGYKTPTDIQVESLPHAL-EGRDIIGVASTGSGKTAAFALPILQKLWED---- 82
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A ++ PTRELA Q++ + + + R IVGGM
Sbjct: 83 ---------------PKG-LFACVLAPTRELAYQISQQFESLGSAMGARCAVIVGGMDMP 126
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP +VV TPGRL + + E L ++ F VLDEADR+++ + I
Sbjct: 127 AQAIALAKRPHIVVATPGRLMQHLE--ETKGFSLRSIKFLVLDEADRLLDLDFGASIDKI 184
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P K+R T +FSAT+ KL+ SL +
Sbjct: 185 LKVIP------------------------KERTTYLFSATMTTKV---AKLQRASLSNPV 217
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
+ + +T+S L + ++ +DKDAYL Y+++
Sbjct: 218 RIEVSSKYQTVS----------------------TLLQYYLLMPLKDKDAYLIYLINSLA 255
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
Q I+F ++ + +S +L+ LG LH Q+ Q RL
Sbjct: 256 QNSIIMFTRTVHDAQRLSIILRTLGFPAVPLHGQLSQSQRL 296
>gi|307195490|gb|EFN77376.1| Probable ATP-dependent RNA helicase DDX49 [Harpegnathos saltator]
Length = 444
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 163/337 (48%), Gaps = 76/337 (22%)
Query: 195 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGE 254
K+PT IQ+ CIP G+D IG A+TGSGKTLAF LPI+Q+L E+
Sbjct: 1 LKQPTAIQQNCIPRIL-GGEDCIGCAKTGSGKTLAFALPILQKLCED------------- 46
Query: 255 EAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKAR 314
P G + AL++TPTRELA Q+ D + K IN++ IVGGM Q L R
Sbjct: 47 ------PYG-IFALVLTPTRELAFQIADQFAAIGKAINLKKCVIVGGMDMMVQGLELSKR 99
Query: 315 PEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHF-RELQSIIDMLPMTN 373
P +VV TPGRL + + + L + F VLDEADR++ GHF ++L++I LP
Sbjct: 100 PHIVVATPGRLADHLDSC--NTFSLKRIKFLVLDEADRLL-GGHFDKQLKTIFATLP--- 153
Query: 374 GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSI 433
+++Q L+FSAT+ D ++KS S N +
Sbjct: 154 ---------------------EQKQVLLFSATMTNDLD--------NVKSVAS----NKV 180
Query: 434 ETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL----SVHGQGRT 489
E+ A +A V +L++ ++ C ++ D+YL ++ + + G
Sbjct: 181 FIWEEKDD--AGIATV---------KELDQRYVLCPKDVLDSYLVEVIRTFCATNKNGSI 229
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+VF + + +S L +G LHA ++Q+ RL
Sbjct: 230 MVFTDTCKNCQLLSMALNDVGFTNVALHAMIKQKERL 266
>gi|329926082|ref|ZP_08280693.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
gi|328939480|gb|EGG35833.1| ATP-dependent RNA helicase RhlE [Paenibacillus sp. HGF5]
Length = 506
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 132/230 (57%), Gaps = 42/230 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + P+++K++ + +K PTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 3 FEDLNISPVILKALAKENYKAPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L ++ K +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 62 LL--------------NQQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRST 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+S + QER L+ ++++ TPGRL +LM+ +KH V+L + VLDEADRM++
Sbjct: 108 AIVGGVSQKTQERALQQGADILIATPGRLLDLMN--QKH-VDLQHVEILVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
G +++ II +P K+QTL FSAT+
Sbjct: 165 GFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|323490564|ref|ZP_08095770.1| ATP-dependent RNA helicase exp9 [Planococcus donghaensis MPA1U2]
gi|323395830|gb|EGA88670.1| ATP-dependent RNA helicase exp9 [Planococcus donghaensis MPA1U2]
Length = 506
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL + +KS+ R+ F+E TPIQ+ I +GKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNISETTLKSVKRMGFEEATPIQEGTI-RLGMEGKDIIGQAQTGTGKTTAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ G+++ LII PTRELA+QV++ L + + NVR++
Sbjct: 63 KI--------------------DTKDGNVQGLIIAPTRELAIQVSEELYRLGQDKNVRIL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP+++VGTPGRL + ++ + ++L ++ +LDEAD M+
Sbjct: 103 SVYGGQEISRQIRALKNRPQIIVGTPGRLLDHIN---RRTLKLDNVNTLILDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++Q+I+ +P T RQTL+FSAT+ D +++
Sbjct: 160 GFIEDIQTIMASVPDT------------------------RQTLLFSATM---PDAIRRI 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K+ + IV + + + +E+ +++ E +K +
Sbjct: 193 AEKFMKTPE----------------------IVKIKSKEMTVENIEQFYVKSVEREKFDF 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L+V IVF + + ++ L I G +H + Q R+ + Q
Sbjct: 231 LSRLLNVQQPELAIVFGRTKRRVDELAKALNIRGYLAEGIHGDLSQAKRMSVLKQF 286
>gi|297800452|ref|XP_002868110.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
gi|297313946|gb|EFH44369.1| hypothetical protein ARALYDRAFT_493213 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 169/359 (47%), Gaps = 70/359 (19%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+S D++ EL L L+++ L +K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 165 VSFHADSFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 223
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKGV 287
F LP ++RLL + PK R LI+TPTRELA+Q+ ++ +
Sbjct: 224 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQKL 264
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 265 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 322
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 323 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATMT 358
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
KL LN LS R LT V +
Sbjct: 359 EEVKELVKL------------SLNKPLRLSADPSARRPPG---LTEEVVRIRR------- 396
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+E +++A L + + + + I+F + A + L + G+ LH + Q RL
Sbjct: 397 TREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRL 455
>gi|346978651|gb|EGY22103.1| ATP-dependent rRNA helicase rrp-3 [Verticillium dahliae VdLs.17]
Length = 486
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 161/343 (46%), Gaps = 75/343 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L+++ L +K PTPIQ+ IP A +G+DVIG AETGSGKT AF LP++Q LLE+
Sbjct: 72 LVEATEALGYKHPTPIQEKSIPLAL-EGRDVIGLAETGSGKTAAFALPVLQALLEK---- 126
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
P G L A+++ PTRELA Q+ + + IN+R IVGG+
Sbjct: 127 ---------------PSG-LFAVVMAPTRELAAQIAQTFEALGSLINLRCAVIVGGLDMV 170
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
+Q L +P VVV TPGRL + + + L +L + VLDEADR+++ + I
Sbjct: 171 QQAIALGKKPHVVVATPGRLLDHLEKTKG--FSLRSLKYLVLDEADRLLDMDFGPSIDKI 228
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF--RKKLKHGSLKS 423
+ +P ++R T +FSAT++ + R LK + S
Sbjct: 229 LKFIP------------------------RERHTYLFSATMSSKVESLQRASLKDPARVS 264
Query: 424 KQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSV 483
QS NG + TL L N + + L KD Y ++++
Sbjct: 265 VQS-NGYQVVSTL--------------LQNYLFIPHAL-----------KDVYCVHLINS 298
Query: 484 HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
TIVF ++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 299 FIGQTTIVFLRTVHDTQRLAILLRTLGFSALPLHGQLSQSARL 341
>gi|171691382|ref|XP_001910616.1| hypothetical protein [Podospora anserina S mat+]
gi|170945639|emb|CAP71752.1| unnamed protein product [Podospora anserina S mat+]
Length = 490
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 184/403 (45%), Gaps = 83/403 (20%)
Query: 142 KKIKTVEESVAVSNGPDDAEEELVNEA---EISTEFD---------AWNELRLHPLLMKS 189
KK KT ++ GP+ E+ V+EA E ST D + +L + L ++
Sbjct: 17 KKKKTEAPKPKITPGPEPRIEDAVSEASDAEESTTLDNENGEAAPKTFKDLGIVDSLCEA 76
Query: 190 IYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKML 249
RL +K+PT IQ+ IP A Q +D+IG AETGSGKT AF LPI+Q LL++ +
Sbjct: 77 CDRLGYKQPTAIQQEAIPLAL-QDRDIIGIAETGSGKTAAFALPILQALLDKPQP----- 130
Query: 250 EDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQER 309
L AL++ PTRELA Q+ + + IN+R ++GG+ +Q
Sbjct: 131 ---------------LFALVLAPTRELAAQIAQSFEALGSLINLRCALLLGGLDMVQQAI 175
Query: 310 LLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDML 369
L +P VVV TPGRL + + + L L + V+DEADR+++ L+ I+ L
Sbjct: 176 ALGKKPHVVVATPGRLLDHLEKTKGF--SLRNLRYCVMDEADRLLDMDFGPILEKILKFL 233
Query: 370 PMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNG 429
P ++R+T +FSAT++
Sbjct: 234 P------------------------RERRTFLFSATMS---------------------- 247
Query: 430 LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRT 489
+ +E+L +RA +R + + T+ + L +++ KD Y Y+ +
Sbjct: 248 -SKVESL-QRASLRDPLKVNVSTSKYQTVSTLVSNYLFIPHIHKDTYFIYLCNEFAGKTM 305
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
IVF ++ + I+ LL+ LG+ LH + Q ARL S+
Sbjct: 306 IVFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALSKF 348
>gi|71022263|ref|XP_761361.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
gi|74699927|sp|Q4P3U9.1|RRP3_USTMA RecName: Full=ATP-dependent rRNA helicase RRP3
gi|46097669|gb|EAK82902.1| hypothetical protein UM05214.1 [Ustilago maydis 521]
Length = 551
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 177/383 (46%), Gaps = 77/383 (20%)
Query: 160 AEEELVNEAEISTEFD-----AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
A +E +E +++T D +++L + P ++++ + FK PTPIQ IP A Q +
Sbjct: 84 AADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEAL-QAR 142
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
DVIG A+TGSGKT AF +PI+Q L + PK A ++ PTR
Sbjct: 143 DVIGLAQTGSGKTAAFTIPILQALWDN-------------------PKPFF-ACVLAPTR 182
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q++ ++ + I VR IVGGM Q L RP V+V TPGRL + + +
Sbjct: 183 ELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTKG 242
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR+++ + IID L + S+ R
Sbjct: 243 --FSLRGLQYLVMDEADRLLD----MDFGPIIDKL-------------------LQSIPR 277
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
++R T++FSAT+ KL+ SLK N V++
Sbjct: 278 ERR-TMLFSATMTTKV---AKLQRASLK----------------------NPVRVEVDTK 311
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+ L++ ++ KD YL ++ + IVF ++ + +S LL++LG
Sbjct: 312 YTTVSTLKQHYMFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPAI 371
Query: 515 TLHAQMQQRARLKLFSQMITWIR 537
LH Q+ Q+ARL ++ T R
Sbjct: 372 PLHGQLSQQARLGALNKFKTGGR 394
>gi|418745859|ref|ZP_13302194.1| DEAD/DEAH box helicase [Leptospira santarosai str. CBC379]
gi|418754476|ref|ZP_13310702.1| DEAD/DEAH box helicase [Leptospira santarosai str. MOR084]
gi|421113707|ref|ZP_15574146.1| DEAD/DEAH box helicase [Leptospira santarosai str. JET]
gi|422003115|ref|ZP_16350348.1| ATP-dependent RNA helicase [Leptospira santarosai serovar Shermani
str. LT 821]
gi|409965196|gb|EKO33067.1| DEAD/DEAH box helicase [Leptospira santarosai str. MOR084]
gi|410793243|gb|EKR91163.1| DEAD/DEAH box helicase [Leptospira santarosai str. CBC379]
gi|410800807|gb|EKS06986.1| DEAD/DEAH box helicase [Leptospira santarosai str. JET]
gi|417258336|gb|EKT87728.1| ATP-dependent RNA helicase [Leptospira santarosai serovar Shermani
str. LT 821]
Length = 514
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKFKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L+ + +LDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNIKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|161784286|sp|Q5ACU6.2|RRP3_CANAL RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 539
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 163/354 (46%), Gaps = 72/354 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+F + EL L P L++SI ++F +PTPIQ IP A +GKD+IG A+TGSGKT AF +
Sbjct: 121 KFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHAL-EGKDIIGLAQTGSGKTAAFAI 179
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q L ++ AL++ PTREL Q+ D + +
Sbjct: 180 PILQSLWHAQQPYF--------------------ALVLAPTRELTFQIKDTFDALGSSMG 219
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGGM Q R L +P V+V TPGR+ + + + L L + V+DEADR
Sbjct: 220 LRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKG--FSLKNLKYLVMDEADR 277
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ L I+ ++P+ KR T +FSAT+
Sbjct: 278 LLDMDFGPALDKILKVIPI------------------------KRTTYLFSATMT----- 308
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
N IE L +RA + N V +++ A+ L +S + +
Sbjct: 309 ------------------NKIEKL-QRASLH-NPVRVAVSSKYQTADNLVQSMMLVNDGY 348
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ L ++L+ IVF ++A + + L +ILG + LH Q+ Q RL
Sbjct: 349 KNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRL 402
>gi|336469774|gb|EGO57936.1| hypothetical protein NEUTE1DRAFT_81992 [Neurospora tetrasperma FGSC
2508]
Length = 830
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 167/372 (44%), Gaps = 78/372 (20%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE N+ + E ++ E+ L +++ + + F +PTPIQ IP + GKDV+G A
Sbjct: 282 EEE--NQPKKKGEMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGA 338
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELAL 278
TGSGKT AF +PI++RLL Y PK R +I+TPTRELA+
Sbjct: 339 VTGSGKTAAFVVPILERLL-------------------YRPKKVPTTRVVILTPTRELAI 379
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q +A +++ VGG+S + QE L+ RP+VV+ TPGR + M V+
Sbjct: 380 QCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD 439
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
T+ VLDEADRM+E+G EL I+ LP K RQ
Sbjct: 440 --TIEILVLDEADRMLEDGFADELNEILTTLP------------------------KSRQ 473
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T++FSAT+ S D +L RAG+ V I+ + A
Sbjct: 474 TMLFSATMTSSVD---RLI---------------------RAGLNKPVRIM-ADSQKKTA 508
Query: 459 NKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L + F+ + E ++ YL +I R I+F + + + G+
Sbjct: 509 GTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAE 568
Query: 516 LHAQMQQRARLK 527
LH M Q R++
Sbjct: 569 LHGSMNQAQRIQ 580
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 162/354 (45%), Gaps = 72/354 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E L +++ + + F +PTPIQ+ IP A GKD++G+A TGSGKT AF +PI++
Sbjct: 306 FQEFNLSRPILRGLAAVGFTDPTPIQRKAIPVALL-GKDIVGSAVTGSGKTAAFIVPILE 364
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RLL K R +I+ PTRELA+Q + +A +V
Sbjct: 365 RLLFRPRKVPTS-----------------RVVILMPTRELAVQCYNVSVKLATFTDVTFC 407
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM+E+
Sbjct: 408 QLVGGFSLREQENVLKKRPDVIIATPGRFIDHMRNSPSFTVD--TLEILVLDEADRMLED 465
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G EL I+ +P K RQT++FSAT+
Sbjct: 466 GFADELNEILTTIP------------------------KSRQTMLFSATMT--------- 492
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+SI+ L R GM V ++ + ++ ++E F+ + +D
Sbjct: 493 --------------DSIDKLI-RVGMNRPVRLMVDSKKNTVSTLVQE-FVRLRPGREDKR 536
Query: 477 LYYILSVHGQ---GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L Y+L + + R I+F + + +LG+ LH + Q R+K
Sbjct: 537 LGYLLHLCKEIYSKRVIIFFRQKKEAHRVRIIFSLLGLKAAELHGSLSQEQRIK 590
>gi|448103925|ref|XP_004200160.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
gi|359381582|emb|CCE82041.1| Piso0_002734 [Millerozyma farinosa CBS 7064]
Length = 437
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 173/354 (48%), Gaps = 65/354 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++++L + L +++ ++ PT IQKACIP +G D IG A+TGSGKT+AF PI+
Sbjct: 2 SFSDLGVAKWLCEALNSMKIYTPTAIQKACIPKVL-KGHDCIGGAKTGSGKTIAFASPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+ E+ P G + L++TPTRELALQ+ + + +N++V
Sbjct: 61 TKWSED-------------------PYG-IYGLVLTPTRELALQIAEQFAALGATMNIKV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
IVGG KQ L+ RP +V+ TPGRL + +++ GE + L + + VLDEADR++
Sbjct: 101 CVIVGGDDIVKQALELQRRPHIVIATPGRLADHILNSGEDTICGLRRVKYLVLDEADRLL 160
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
N +L+ +LP + + RQTL+F+ATI D +
Sbjct: 161 SNSFGSDLERCFGVLP----------------------KPENRQTLLFTATI---TDAVR 195
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
LK + + +N ++T+ N+AI + L ++ K+
Sbjct: 196 SLKEKPVPEGKLPVFVNEVDTVE-------NIAI---------PSTLSIKYLFVPSYVKE 239
Query: 475 AYLYYILSV--HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
AYL+ +L++ + + TI+F + +L+ L V +LH++M Q R+
Sbjct: 240 AYLHNLLTLPEYEKTTTIIFVNRTHTAELLRRMLRKLDFRVASLHSEMPQSERV 293
>gi|56418761|ref|YP_146079.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
gi|81675946|sp|Q5L3G9.1|CSHA_GEOKA RecName: Full=DEAD-box ATP-dependent RNA helicase CshA
gi|56378603|dbj|BAD74511.1| ATP-dependent RNA helicase [Geobacillus kaustophilus HTA426]
Length = 467
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L +MK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ ++AL++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV--------------------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG E+Q R LK P V+VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILSHVP------------------------AERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V +++ ++E E+ K
Sbjct: 187 --------------DPIRRIAERFMNEPELVKVKAKEMTV--PNIQQYYLEVHEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 168/373 (45%), Gaps = 76/373 (20%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
+E+ E ++ + L ++K++ L F +PTPIQ A IP A GKDV+G A TGSG
Sbjct: 170 SESGAPAEHSSFLTMNLSRPILKALTTLGFTKPTPIQAATIPVAL-LGKDVVGNAVTGSG 228
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KT AF +P+++RLL +KG++A R L++ PTRELA+Q + K
Sbjct: 229 KTAAFTIPMLERLL---------YREKGKKA------AATRCLVLVPTRELAVQCYEVGK 273
Query: 286 GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
+A ++ V IVGG+S + QE L+ARP++V+ TPGRL + + L L
Sbjct: 274 KLAAHTDIEVALIVGGLSLKSQEATLRARPDIVIATPGRLIDHIHNSPSFT--LDNLDVL 331
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
VLDEADRM+ +G EL II P K RQT++FSAT
Sbjct: 332 VLDEADRMLSDGFADELTEIIKACP------------------------KSRQTMLFSAT 367
Query: 406 IALSAD------FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLAN 459
+ S D K ++ + + GL E + RAG
Sbjct: 368 MTDSVDELVRMSLDKPVRLFVDPKRSTAKGLIQ-EFVRVRAG------------------ 408
Query: 460 KLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
+E+++ L + + + R I+F S + + ++G+ LH
Sbjct: 409 ---------REKERSPLLVALCTRTFKTRVIIFVRSKKLAHQLRIVFGLVGLKCGELHGD 459
Query: 520 MQQRARLKLFSQM 532
+ Q RL Q
Sbjct: 460 LSQEQRLNALQQF 472
>gi|389818136|ref|ZP_10208577.1| ATP-dependent RNA helicase exp9 [Planococcus antarcticus DSM 14505]
gi|388464068|gb|EIM06404.1| ATP-dependent RNA helicase exp9 [Planococcus antarcticus DSM 14505]
Length = 507
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL + +KS+ R+ F+E TPIQ+ I +GKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNISETTLKSVKRMGFEEATPIQEGTI-RLGMEGKDIIGQAQTGTGKTTAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ G+++ LII PTRELA+QV++ L + + NVR++
Sbjct: 63 KI--------------------DTKDGNVQGLIIAPTRELAIQVSEELYRLGQDKNVRIL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK RP+++VGTPGRL + ++ + ++L ++ +LDEAD M+
Sbjct: 103 SVYGGQEISRQIRALKNRPQIIVGTPGRLLDHIN---RRTLKLDNVNTLILDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++Q+I+ +P T RQTL+FSAT+ D +++
Sbjct: 160 GFIEDIQTIMASVPDT------------------------RQTLLFSATM---PDAIRRI 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K+ + IV + + + +E+ +++ E +K +
Sbjct: 193 AEKFMKTPE----------------------IVKIKSKEMTVENIEQFYVKSVEREKFDF 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L+V IVF + + ++ L I G +H + Q R+ + Q
Sbjct: 231 LSRLLNVQQPELAIVFGRTKRRVDELAKALNIRGYLAEGIHGDLSQAKRMSVLKQF 286
>gi|255942321|ref|XP_002561929.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586662|emb|CAP94307.1| Pc18g00830 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 520
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 175/357 (49%), Gaps = 66/357 (18%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ EL + P L+ S+ + K PT IQKACIP +GKD IG + TGSGKT+AF +P
Sbjct: 89 LSTFAELDVAPWLVSSLATMAIKRPTAIQKACIPEIL-KGKDCIGGSRTGSGKTMAFAVP 147
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
IMQ+ P G + AL++TPTRELALQ+ + + V+ N+
Sbjct: 148 IMQQWARN-------------------PFG-IYALVLTPTRELALQIYEQFRAVSAPQNM 187
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADR 352
+ + +VGGM +Q L +RP VV+ TPGRL + + + GE + L + VLDEADR
Sbjct: 188 KPILVVGGMDMRQQAIELASRPHVVIATPGRLADHIKTSGEDTVAGLRRVKMVVLDEADR 247
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ +G MLP + C+ +RQTL+F+AT ++A+
Sbjct: 248 LLASGPG-------SMLP-----------DVETCLGALP-PSAERQTLLFTAT--MTAEV 286
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL--TNMCVLANKLEESFIECKE 470
R +LKS + AG + + + ++ N + L++++++
Sbjct: 287 R------ALKSMPA-------------AGNKPPIFMTEIGTENQGKIPPTLKQTYLKVPM 327
Query: 471 EDKDAYLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++A+L+ +LS V+ IVFC + L+ LG + +LH+ + Q R
Sbjct: 328 THREAFLHALLSTEVNVTKPVIVFCNHTKTCDLLERTLRRLGHRITSLHSILPQSER 384
>gi|149245944|ref|XP_001527442.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013518|sp|A5DY34.1|DRS1_LODEL RecName: Full=ATP-dependent RNA helicase DRS1
gi|146449836|gb|EDK44092.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 686
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 179/355 (50%), Gaps = 74/355 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ EL+L ++KS+ +L F PTP+Q + IP A GKD++ +A+TGSGKT A+ +PI+
Sbjct: 197 TFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALL-GKDIVASAQTGSGKTAAYLIPII 255
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVR 294
+RLL + + +A+I+TPTRELA+QV D + + + + N+
Sbjct: 256 ERLLYVKNSTST------------------KAIILTPTRELAIQVHDVGRKLGQFVSNLN 297
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
VGG+S ++QE+ LK RP++V+ TPGRL + + VE + ++DEADRM+
Sbjct: 298 FGMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVE--DVQVLIIDEADRML 355
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
E G EL I+ ++P ++KRQTL+FSAT
Sbjct: 356 EEGFQEELTEILSLIP-----------------------KQKRQTLLFSAT--------- 383
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIEC--KEE 471
+N+ + + + + N I V + +A+KLE+ F+ +EE
Sbjct: 384 ---------------MNNTK-IQDLVQLSLNKPIKVSIDPPRTVASKLEQQFVRIRKREE 427
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K A LY +L +GRT+VF + + +L +LG+ V LH + Q RL
Sbjct: 428 LKPAVLYLLLK-KLEGRTVVFTRTKVEAHKLRIILGLLGLTVAELHGALTQEQRL 481
>gi|354478220|ref|XP_003501313.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 [Cricetulus
griseus]
Length = 455
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 170/371 (45%), Gaps = 72/371 (19%)
Query: 156 GPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
G D+ E + A E + +L + +L ++ +L + +PT IQ IP A QG+D
Sbjct: 5 GEHDSSTETLQAAAEEEEAKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL-QGRD 63
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRE 275
+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTRE
Sbjct: 64 IIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRE 103
Query: 276 LALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
LA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + +
Sbjct: 104 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSIALAKKPHIVIATPGRLIDHLENTKGF 163
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L L + V+DEADR++ E+ I+ ++P +
Sbjct: 164 --NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------R 197
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 198 DRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------- 235
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ---EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIP 292
Query: 516 LHAQMQQRARL 526
LH QM Q RL
Sbjct: 293 LHGQMSQSKRL 303
>gi|350290558|gb|EGZ71772.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 865
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 167/372 (44%), Gaps = 78/372 (20%)
Query: 161 EEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
EEE N+ + E ++ E+ L +++ + + F +PTPIQ IP + GKDV+G A
Sbjct: 282 EEE--NQPKKKGEMASFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISL-MGKDVVGGA 338
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELAL 278
TGSGKT AF +PI++RLL Y PK R +I+TPTRELA+
Sbjct: 339 VTGSGKTAAFVVPILERLL-------------------YRPKKVPTTRVVILTPTRELAI 379
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q +A +++ VGG+S + QE L+ RP+VV+ TPGR + M V+
Sbjct: 380 QCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVD 439
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
T+ VLDEADRM+E+G EL I+ LP K RQ
Sbjct: 440 --TIEILVLDEADRMLEDGFADELNEILTTLP------------------------KSRQ 473
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T++FSAT+ S D +L RAG+ V I+ + A
Sbjct: 474 TMLFSATMTSSVD---RLI---------------------RAGLNKPVRIM-ADSQKKTA 508
Query: 459 NKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L + F+ + E ++ YL +I R I+F + + + G+
Sbjct: 509 GTLVQEFVRLRPGRESKREGYLLHICKTIYTERVIIFFRQKKIAHKMRIIFGLFGLSCAE 568
Query: 516 LHAQMQQRARLK 527
LH M Q R++
Sbjct: 569 LHGSMNQAQRIQ 580
>gi|451823382|ref|YP_007459656.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451776182|gb|AGF47223.1| superfamily II DNA and RNA helicase [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 480
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 173/359 (48%), Gaps = 71/359 (19%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L ++P ++ +I F+ PTP+Q A IP A + +D++ +A+TGSGKT AF LPI+
Sbjct: 2 SFENLGINPNIISAIKATGFESPTPVQNATIPKAILR-QDLVVSAQTGSGKTAAFILPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN-VR 294
L + + + ++ LI+TPTRELA+Q+T + +R
Sbjct: 61 NHLSQMPKSSNTAIQ----------------VLILTPTRELAMQITKAASSYGSNFHWLR 104
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ IVGGM + Q + L R +++V TPGRL + M G +L +HTL VLDEADRM+
Sbjct: 105 MATIVGGMPYQSQIKALSKRIDILVATPGRLIDQMQSGRVNLKSVHTL---VLDEADRML 161
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+ G ++Q+I+ LP K+RQT++FSAT+
Sbjct: 162 DMGFIEDIQNIVSHLP------------------------KERQTMLFSATLD------- 190
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE-EDK 473
NSI L+++ M N + LTN + +E+ I + K
Sbjct: 191 ----------------NSIMNLAKQ--MMNNPERISLTNNKQSHSNIEQKLIYVDDNHHK 232
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L ++L+ + + +VF ++ +++ L +G V LH M QR R + +Q+
Sbjct: 233 IRVLQHLLNKNDLDQAVVFTSTKRGADELANHLADIGFAVAALHGDMNQRQRTRTLAQL 291
>gi|431908355|gb|ELK11952.1| Putative ATP-dependent RNA helicase DDX47 [Pteropus alecto]
Length = 472
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 171/366 (46%), Gaps = 73/366 (19%)
Query: 162 EELVNEAEISTEFDAWNELR-LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAA 220
++LV+ + + W + + + +L ++ +L + +PT IQ IP A QG+D+IG A
Sbjct: 27 KDLVSVDDADSFLSCWRQAQGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIGLA 85
Query: 221 ETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQV 280
ETGSGKT AF LPI+ LLE ++ L AL++TPTRELA Q+
Sbjct: 86 ETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRELAFQI 125
Query: 281 TDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELH 340
++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + + L
Sbjct: 126 SEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKG--FNLR 183
Query: 341 TLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTL 400
L + V+DEADR++ E+ I+ ++P + R+TL
Sbjct: 184 ALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRKTL 219
Query: 401 VFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANK 460
+FSAT+ +KL+ +LK+ + +T+ K
Sbjct: 220 LFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV----------------------EK 254
Query: 461 LEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQM 520
L++ ++ + KD YL YIL+ ++FC++ + + LL+ LG LH QM
Sbjct: 255 LQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQM 314
Query: 521 QQRARL 526
Q RL
Sbjct: 315 SQSKRL 320
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + P ++++ +L FK PT IQ+ IP A GKD++G A+TGSGKT AF +P++Q
Sbjct: 15 FEKLGVDPQIVEACKKLGFKNPTEIQRKAIPEAL-AGKDIVGLAQTGSGKTAAFSIPMLQ 73
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL + P G L L++ PTRELA+Q++D ++ + I V+
Sbjct: 74 ALLAK-------------------PSG-LFGLVLAPTRELAVQISDQIEALGAVIGVKCA 113
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+ T Q L +P ++VGTPGR+ + + L TL +FV+DEADR++
Sbjct: 114 VLVGGIDTMSQSMALAKKPHIIVGTPGRVVYHLENTKGF--NLKTLKYFVMDEADRLLGM 171
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ +I+ ++P K R T +FSAT+ KL
Sbjct: 172 DFEEEINTILKVIP------------------------KDRNTFLFSATMTSKV---AKL 204
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL + T+ + L++ +I + K+ Y
Sbjct: 205 QRASLNDPVKIQVATKYSTV----------------------DTLQQEYIFIPYKHKECY 242
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ I+F ++ AA ++ +L+ L ++ QM Q RL
Sbjct: 243 LTYILNELAGNSVIIFTSTCAASTKLAIMLRNLSFKAIPINGQMDQSKRL 292
>gi|146163668|ref|XP_001012102.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146145909|gb|EAR91857.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 533
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 159/341 (46%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L+++ RL++ +PT IQ+ + Q +D+I AETGSGKTLAF LP++Q LL+
Sbjct: 107 LVEACNRLKYVKPTAIQRESLVYTLKQ-RDIIALAETGSGKTLAFALPVIQNLLD----- 160
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
AP+ AL+++PTREL +Q+ +H + + GI+++ IVGG+
Sbjct: 161 --------------APQP-FYALVLSPTRELCMQIAEHFEALGVGISLKTTVIVGGLDPM 205
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L +P +++GTPGR+ M + L F VLDEAD+++ +++ I
Sbjct: 206 AQAIALSKKPHIIIGTPGRILYHMQNTKGF--NFKALKFLVLDEADKLLNMDFEKDINQI 263
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+D++P KKR T +FSAT+ KL+ SLK
Sbjct: 264 LDIIP------------------------KKRNTFLFSATMTNKV---HKLQRASLKDPV 296
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
IE S+ + VA + +FI K KD YL Y L+
Sbjct: 297 ------KIEVSSKYQMVSTLVA--------------QYAFIPAKY--KDCYLVYSLNEFA 334
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+I+F + ++ +L+ LG T+H QM Q RL
Sbjct: 335 GNTSIIFVQTCLNAIKLTLMLRNLGFSAVTIHGQMSQVKRL 375
>gi|150864695|ref|XP_001383630.2| nucleolar DEAD-box protein required for synthesis of 60S ribosomal
subunits [Scheffersomyces stipitis CBS 6054]
gi|149385951|gb|ABN65601.2| nucleolar DEAD-box protein required for synthesis of 60S ribosomal
subunits, partial [Scheffersomyces stipitis CBS 6054]
Length = 672
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 179/374 (47%), Gaps = 77/374 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
D +E ++++ T F L+L ++K + +L + +P+PIQ A IP A G+D++
Sbjct: 146 DEKETKSAKSQVHTTFQT---LQLSRPVLKGLSQLGYTKPSPIQSASIPIALL-GRDIVA 201
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKT A+ +PI++RLL + K A R +++TPTRELA+
Sbjct: 202 GAVTGSGKTAAYMIPIIERLLYKPSKVAST-----------------RVIVLTPTRELAI 244
Query: 279 QVTDHLKGVAKGI-NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
QV D K + + + N+ VGG++ +QE+ LK+RP+VV+ TPGRL + + +
Sbjct: 245 QVGDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKSRPDVVIATPGRLIDHIRNSPSFSI 304
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ +L V+DEADRM++ G EL I+ ++P + KR
Sbjct: 305 D--SLEVLVIDEADRMLDEGFQVELTEILSLIP-----------------------KNKR 339
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
QTL+FSAT+ I+ L + + R ++D
Sbjct: 340 QTLLFSATMN-----------------------TKIQDLIQLSLQRPVRIMIDPPKTA-- 374
Query: 458 ANKLEESFIECKEED--KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGID 512
A KL + F+ ++ D K A L+ + L Q R +VF + + + +L +LG+
Sbjct: 375 ATKLTQEFVRIRKRDHLKPALLFQLLKKLDPAQQSRIVVFVSRKESAHKLRIVLGLLGMK 434
Query: 513 VWTLHAQMQQRARL 526
V LH + Q RL
Sbjct: 435 VSELHGSLTQEQRL 448
>gi|148678591|gb|EDL10538.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a [Mus
musculus]
Length = 354
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 172/377 (45%), Gaps = 73/377 (19%)
Query: 150 SVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAA 209
++A PD L AE E + +L + +L ++ +L + +PT IQ IP A
Sbjct: 3 NMAADEEPDSPSGALQTAAE-EEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLA 61
Query: 210 AHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALI 269
QG+D+IG AETGSGKT AF LPI+ LLE ++ L AL+
Sbjct: 62 L-QGRDIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALV 100
Query: 270 ITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELM 329
+TPTRELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + +
Sbjct: 101 LTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHL 160
Query: 330 SGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTV 389
+ L L + V+DEADR++ E+ I+ ++P
Sbjct: 161 ENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------- 199
Query: 390 SSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIV 449
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 200 -----RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------- 238
Query: 450 DLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKIL 509
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ L
Sbjct: 239 ---------EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL 289
Query: 510 GIDVWTLHAQMQQRARL 526
G LH QM Q RL
Sbjct: 290 GFTAIPLHGQMSQSKRL 306
>gi|426225486|ref|XP_004006897.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Ovis aries]
Length = 457
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 169/368 (45%), Gaps = 76/368 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
DA + V E T + +L + +L ++ +L + +PT IQ IP A QG+D+IG
Sbjct: 14 DAPQTAVEVEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIG 68
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+ LLE ++ L AL++TPTRELA
Sbjct: 69 LAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRELAF 108
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGG+ + Q L +P VV+ TPGRL + + +
Sbjct: 109 QISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLENTKGF--N 166
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L + V+DEADR++ E+ I+ ++P + R+
Sbjct: 167 LRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRK 202
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 203 TFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV---------------------- 237
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG LH
Sbjct: 238 EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 297
Query: 519 QMQQRARL 526
QM Q RL
Sbjct: 298 QMSQSKRL 305
>gi|338535344|ref|YP_004668678.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
gi|337261440|gb|AEI67600.1| putative ATP-dependent RNA helicase RhlE [Myxococcus fulvus HW-1]
Length = 516
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 164/352 (46%), Gaps = 74/352 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL+LH L++++ + PTPIQ+ IP A G+DV+G A+TG+GKT AF LPI+Q
Sbjct: 3 FDELQLHDTLLRAVKAEGYTTPTPIQQKAIPHAL-TGRDVLGVAQTGTGKTAAFALPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKG---HLRALIITPTRELALQVTDHLKGVAKGINV 293
RL +AK AP G +R L++TPTRELA QV D + KG+ +
Sbjct: 62 RL------SAK------------APAGGARPVRCLVLTPTRELAGQVGDSFQTYGKGLPL 103
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R I GG+ Q + L+ +V+V TPGRL +LM E+ V L +L FVLDEADRM
Sbjct: 104 RHAVIFGGVGQNPQVQALRNGVDVLVATPGRLLDLM---EQGFVSLRSLEVFVLDEADRM 160
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G +++ +I LP KRQTL FSAT L D
Sbjct: 161 LDMGFIHDVRRVIKALP------------------------PKRQTLFFSAT--LPPDI- 193
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
V+ SI T R V+++ A + + + E K
Sbjct: 194 -------------VDLARSILTDPIR---------VEVSPASSTAETVSQQVYFVEREQK 231
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L ++L R +VF + ++ L+ G+ +H Q AR
Sbjct: 232 RGLLTHLLKEGNISRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNAR 283
>gi|322696755|gb|EFY88543.1| ATP-dependent rRNA helicase RRP3 [Metarhizium acridum CQMa 102]
Length = 478
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 173/372 (46%), Gaps = 74/372 (19%)
Query: 158 DDAEEELVNEA---EISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
D E ++EA E T+ + +L + L ++ L +K PTPIQ+ IP A Q +
Sbjct: 37 DQEESATLDEAALEESDTQPKTFKQLGIVDSLCEACESLNYKFPTPIQEKSIPVAL-QNR 95
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+Q LL++ + L L++ PTR
Sbjct: 96 DIIGLAETGSGKTAAFALPILQALLDKPQP--------------------LFGLVLAPTR 135
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+ + + I++R IVGG+ Q L +P ++V TPGRL + + +
Sbjct: 136 ELAHQIGQSFEALGSSISLRCAVIVGGLDMVPQAVALGKKPHIIVATPGRLVDHLEKTKG 195
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L TL + V+DEADR+++ + ++ +P
Sbjct: 196 --FSLRTLKYLVMDEADRLLDMDFGPAIDKLLKFIP------------------------ 229
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
++R+T +FSAT++ + +E+L +RA +R V + +N
Sbjct: 230 RERRTYLFSATLS-----------------------SKVESL-QRASLRDPVRVSVSSNK 265
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
+ L ++ + + KD YL Y+++ TI+F ++ + I+ LL+ LG
Sbjct: 266 YQTVSTLLQNLLVIPQMRKDTYLIYLVNEFTGKSTIIFTRTVWETQRIAILLRTLGFGAI 325
Query: 515 TLHAQMQQRARL 526
LH Q+ Q ARL
Sbjct: 326 PLHGQLSQSARL 337
>gi|410449276|ref|ZP_11303335.1| DEAD/DEAH box helicase [Leptospira sp. Fiocruz LV3954]
gi|410016935|gb|EKO79008.1| DEAD/DEAH box helicase [Leptospira sp. Fiocruz LV3954]
Length = 514
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKFKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L+ + +LDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLNDIKIVILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNIKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|205372271|ref|ZP_03225085.1| hypothetical protein Bcoam_02010 [Bacillus coahuilensis m4-4]
Length = 499
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 171/349 (48%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L P ++KSI R+ F+E TPIQ IP + +GKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FSELNLSPSMLKSINRMGFEEATPIQAGTIPLSL-EGKDIIGQAQTGTGKTAAFGIPLVE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + +++ LII PTRELA+QV++ L V VRV+
Sbjct: 63 KIDTK--------------------NTNVQGLIIAPTRELAIQVSEELYKVGYDKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R +K P ++VGTPGRL + ++ L ++HTL VLDEAD M+
Sbjct: 103 AVYGGQDINRQIRAMKKGPHIIVGTPGRLLDHINRRTLKLDQVHTL---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++SI+ +P + RQTL+FSAT+
Sbjct: 160 GFIDDIESILKNVP------------------------EGRQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
G ++ K + N + + ET+ ++ V+++D + F++ +E +K
Sbjct: 187 --GPIR-KIAENFMTNPETVKVKSK-EMTVSLID------------QYFVKAQEREKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L +L IVF + + +S L I G +H + Q R
Sbjct: 231 LARLLDTQSPELAIVFGRTKRRVDELSKALSIRGYQAEGIHGDLSQAKR 279
>gi|389630538|ref|XP_003712922.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
gi|351645254|gb|EHA53115.1| ATP-dependent RNA helicase DRS1 [Magnaporthe oryzae 70-15]
Length = 799
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 159/357 (44%), Gaps = 76/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F +PTPIQ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 265 SFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIAL-MGKDVVGGAVTGSGKTAAFVVPIL 323
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R +I+ PTRELA+Q +A ++
Sbjct: 324 ERLL-------------------YRPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDI 364
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ VGG+S + QE L+ RP+V++ TPGR + M V+ T+ VLDEADRM
Sbjct: 365 KFCLAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASFAVD--TVEILVLDEADRM 422
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 423 LEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSVDNL 458
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KE 470
++ GLN L +VD V+ L + F+ +E
Sbjct: 459 IRV------------GLNKPVRL-----------MVDSQKKTVVT--LTQEFVRLRPGRE 493
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E + YL Y+ R I+F H + +LG+ LH M Q R++
Sbjct: 494 EKRMGYLVYLCKNLYTERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQRIQ 550
>gi|409195488|ref|ZP_11224151.1| DEAD/DEAH box helicase-like protein [Marinilabilia salmonicolor JCM
21150]
Length = 427
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 167/352 (47%), Gaps = 61/352 (17%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L L +++S+ + +PTPIQ+ IP GKD++G A+TG+GKT AF +PI+
Sbjct: 2 TFKDLELIEPILRSLKEKGYTQPTPIQEQSIPILLG-GKDLLGCAQTGTGKTAAFSIPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q + L + + K L+ALI+TPTRELA+Q+ + L K +R
Sbjct: 61 QNI---------YLNSSADNQSRRRRKPRLKALIVTPTRELAIQIGESLTDYGKYTGIRN 111
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ I GG+ Q + L+ +++V TPGRL +L+S G + L + +FVLDEADRM++
Sbjct: 112 IVIFGGVKQGAQTQSLQRGTDILVATPGRLLDLISQG---FISLREIEYFVLDEADRMLD 168
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ II++LP KRQ+L FSAT+A
Sbjct: 169 MGFIHDVRKIINLLP------------------------AKRQSLFFSATMA-------- 196
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
I LS + + N V +T A K+++S ++ K
Sbjct: 197 ---------------PEIVKLSGKI-LGGNPGKVTITPKQNTAEKVDQSIYYVDKKSKSR 240
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L +++ + + T+VF + I +LK GI+ +H Q AR K
Sbjct: 241 LLVHLMEENPEDSTLVFSRTKHGADKIVKILKKAGINALAIHGNKSQGARQK 292
>gi|410659385|ref|YP_006911756.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|410662371|ref|YP_006914742.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
gi|409021740|gb|AFV03771.1| Cold-shock DEAD-box protein A [Dehalobacter sp. DCA]
gi|409024727|gb|AFV06757.1| Cold-shock DEAD-box protein A [Dehalobacter sp. CF]
Length = 471
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 177/368 (48%), Gaps = 86/368 (23%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ E+ L +L ++I + F+E TPIQ+ IP +GKD+IG A+TG+GKT AFG+P+++
Sbjct: 4 FFEIGLSSVLTQAISEMGFEETTPIQERTIPLVL-EGKDIIGQAQTGTGKTAAFGIPMIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
R+ +RE ++AL++TPTRELA+QV + L + + VR +
Sbjct: 63 RMKPDRES--------------------IKALVVTPTRELAIQVAEELNRIGQFKGVRSL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG ++Q R L+ RP+++VGTPGRL + M + + L + VLDEAD M+
Sbjct: 103 PIYGGQDIDRQIRSLRNRPQIIVGTPGRLMDHM---RRRTIRLQQVETVVLDEADEMLSM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G ++++I+ +P ++RQTL+FSAT+ L+
Sbjct: 160 GFVEDIENILKEVP------------------------EQRQTLLFSATMPKSILDLAQR 195
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F + ++ S+K+K+ ++ ++E+ ++E +E+
Sbjct: 196 FMQNPEYISMKTKE------------------------------IIVPQIEQCYVEVQEK 225
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR---LKL 528
K L +L + IVF + + + L G +H + Q R ++
Sbjct: 226 QKFDVLCRLLDIQSPDLAIVFGRTKRRVDELFEALSKRGYSAEGIHGDLTQARRDMVMRH 285
Query: 529 FSQMITWI 536
F + +T I
Sbjct: 286 FKEGLTEI 293
>gi|187923247|ref|YP_001894889.1| DEAD/DEAH box helicase [Burkholderia phytofirmans PsJN]
gi|187714441|gb|ACD15665.1| DEAD/DEAH box helicase domain protein [Burkholderia phytofirmans
PsJN]
Length = 489
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 172/364 (47%), Gaps = 67/364 (18%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+++ ++ +++ L P ++K++ + PTPIQ+ IP G+D++GAA+TG+
Sbjct: 1 MSDTAVTPSTATFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVL-AGRDMMGAAQTGT 59
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 283
GKT +F LPI+QRLL + +A +P H +RALI+TPTRELA QV +
Sbjct: 60 GKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAAN 106
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 107 VQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 163
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 164 ILVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 199
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT S + KKL L++ Q++ S T A + +
Sbjct: 200 AT--FSGEI-KKLAATYLRNPQTIEVARSNST----------------------ATNVTQ 234
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
E E DK + ++ G + IVFC S ++ L+ G+ +H Q
Sbjct: 235 VVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRTQN 294
Query: 524 ARLK 527
R++
Sbjct: 295 ERMQ 298
>gi|384493436|gb|EIE83927.1| hypothetical protein RO3G_08632 [Rhizopus delemar RA 99-880]
Length = 711
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 170/378 (44%), Gaps = 77/378 (20%)
Query: 161 EEELVNEAEIS-TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
+E +E+E+ + ++ + L ++K + L F +PTPIQ IP A GKD+ G
Sbjct: 201 KEYFADESEVDKQDHISFTSMNLSRPILKGVTSLGFVKPTPIQSQTIPIAL-MGKDICGG 259
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELA 277
A TGSGKT AF +PI++RLL Y P+ R LI+ PTRELA
Sbjct: 260 AATGSGKTAAFVIPILERLL-------------------YRPRQTPSTRVLILCPTRELA 300
Query: 278 LQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
QV A ++ VGG+S + QE+ LK +P+VVV TPGRL + +
Sbjct: 301 AQVHSAAVKFAAYTDITFCLCVGGLSLKTQEQELKLKPDVVVATPGRLIDHVRNTSGF-- 358
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
L V+DEADRM+E+G EL I+ P K R
Sbjct: 359 HLDACEILVMDEADRMLEDGFADELGEIVKSCP------------------------KSR 394
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
QT++FSAT+ + D +L SL + + VD +N
Sbjct: 395 QTMLFSATMTDNVD---QLIRMSLHNPVRL--------------------FVDRSNQA-- 429
Query: 458 ANKLEESFI---ECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
A++L + F+ + +E D+ A L + + + I+F S AA + L ++G++
Sbjct: 430 ASRLIQEFVRIRQAREADRSAVLLALCKKSFKNKVIIFFRSKAAAHQMKILFGLMGLNAA 489
Query: 515 TLHAQMQQRARLKLFSQM 532
LH + Q RL+ Q
Sbjct: 490 ELHGNLTQEQRLEALEQF 507
>gi|134296504|ref|YP_001120239.1| DEAD/DEAH box helicase domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134139661|gb|ABO55404.1| DEAD/DEAH box helicase domain protein [Burkholderia vietnamiensis
G4]
Length = 512
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 67/352 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+GKT +F LPI+Q
Sbjct: 35 FDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVL-AGRDVMGAAQTGTGKTASFSLPIIQ 93
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
RLL +A +P H +RALI+TPTRELA QV ++ AK +R
Sbjct: 94 RLLPHASTSA-------------SPARHPVRALILTPTRELADQVAANVHAYAKHTALRS 140
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG+ Q L+ E+++ TPGRL + + ++ L + VLDEADRM++
Sbjct: 141 AVVFGGVDMNPQMAELRRGVEILIATPGRLLDHV---QQKTANLGQVQMLVLDEADRMLD 197
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ I+++LP K+RQTL+FSAT + KK
Sbjct: 198 MGFLPDLQRILNLLP------------------------KERQTLLFSATFSPEI---KK 230
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L L++ Q++ VA + TN V + + E DK A
Sbjct: 231 LASTYLRNPQTI-----------------EVARSNSTNANV-----TQIVYDVAEGDKQA 268
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ +L G + IVFC S ++ L+ G+ +H Q R++
Sbjct: 269 AVVQLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQ 320
>gi|428168922|gb|EKX37861.1| hypothetical protein GUITHDRAFT_116000 [Guillardia theta CCMP2712]
Length = 937
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 215/491 (43%), Gaps = 117/491 (23%)
Query: 110 GDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELV---- 165
G D S + + N T + ++KK + + + + + NG +AE++ +
Sbjct: 271 GKTDRPASNASASQNRVASNATASETRRKKGRRGDEESVDKMQMENGTVEAEQQKIELLP 330
Query: 166 ---NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAET 222
++ + AW L LHP L ++ RL F PT IQ I AA +DVIG AET
Sbjct: 331 AWKHQQQKIELLPAWKHLLLHPHLHYALSRLGFVTPTEIQNRSILAAIEMRRDVIGIAET 390
Query: 223 GSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTD 282
G+GKTL+ EL+LQV
Sbjct: 391 GAGKTLS---------------------------------------------ELSLQVCH 405
Query: 283 HLKGV----AKGINV--------RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
HL V A+ N + +P+VGG++ KQER L P +VVGTPGRLWEL+
Sbjct: 406 HLNSVLQLAAQATNFSSSSISFPKAIPVVGGLAEVKQERQLSRHPAIVVGTPGRLWELLE 465
Query: 331 GGEKHL-VELHTLSFFVLDEADRMIENG-------------HFREL----QSIIDMLPMT 372
L + L F VLDEADR++E+G R + + I P+T
Sbjct: 466 SDHAVLRPAMLKLRFIVLDEADRLVESGRFRELRRLLDLLPQARPMKLSGKGIASPAPLT 525
Query: 373 ------NGSNKG------QSEQTQNCVTVSSLQRKKRQTLVFSATIAL------------ 408
S+KG + E+T V + RQ +FSAT +
Sbjct: 526 ELEKRCTESSKGLVRLVAEQEETSGEVVGDEVSPPLRQAFLFSATFSPRQPRYLLRRAKD 585
Query: 409 -------SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
+A RK++K + + + N + M ++++T ++++++
Sbjct: 586 SQAAERGNATKRKRVKE---EMELPTSYFNMFKVARRIMKMSTKPILINVTTSRIVSSRV 642
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+E ++CKEE++D ++Y+ L +H GRTI+F I+ +R ++++L L + + HA MQ
Sbjct: 643 KEIVVKCKEEERDLFIYFFL-LHNPGRTIIFVNHISLVRRLAAILAALDLPAFPFHASMQ 701
Query: 522 QRARLKLFSQM 532
QRARLK+ +
Sbjct: 702 QRARLKMMDRF 712
>gi|398814336|ref|ZP_10573017.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
gi|398036605|gb|EJL29814.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
Length = 529
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 74/354 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ LH ++++I+ + F+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-DGGDLIGQAQTGTGKTAAFGIPLV- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 62 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDNVHTL---VLDEADEMLDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II+ +P +RQTL+FSAT+ K+L
Sbjct: 159 GFIEDIETIINHMP------------------------DERQTLLFSATMPPEI---KRL 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K Q++ ++ V A +E+ + + + +K
Sbjct: 192 ATRYMKQPQTIA----------------------VSREEVTAPLIEQVYYKVFDRNKVES 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L IL I+FC + + +S +L+ G LH + Q R K+ +
Sbjct: 230 LCRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMN 283
>gi|152013519|sp|A4QYM6.1|DRS1_MAGO7 RecName: Full=ATP-dependent RNA helicase DRS1
gi|440472865|gb|ELQ41697.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae Y34]
gi|440482949|gb|ELQ63394.1| ATP-dependent RNA helicase drs-1 [Magnaporthe oryzae P131]
Length = 790
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 159/357 (44%), Gaps = 76/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F +PTPIQ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 256 SFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIAL-MGKDVVGGAVTGSGKTAAFVVPIL 314
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R +I+ PTRELA+Q +A ++
Sbjct: 315 ERLL-------------------YRPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDI 355
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ VGG+S + QE L+ RP+V++ TPGR + M V+ T+ VLDEADRM
Sbjct: 356 KFCLAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASFAVD--TVEILVLDEADRM 413
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ LP K RQT++FSAT+ S D
Sbjct: 414 LEDGFADELNEILTTLP------------------------KSRQTMLFSATMTSSVDNL 449
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KE 470
++ GLN L +VD V+ L + F+ +E
Sbjct: 450 IRV------------GLNKPVRL-----------MVDSQKKTVVT--LTQEFVRLRPGRE 484
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E + YL Y+ R I+F H + +LG+ LH M Q R++
Sbjct: 485 EKRMGYLVYLCKNLYTERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQRIQ 541
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 163/355 (45%), Gaps = 70/355 (19%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L L+K++ L F PTPIQ A IP A GKDV+G A TGSGKT AF +P++
Sbjct: 186 SFTTMSLSRPLLKALTALGFSTPTPIQVATIPVALL-GKDVVGNAVTGSGKTAAFMIPVL 244
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+RL M ++G+ K +R +++ PTREL +Q D K ++ ++VR+
Sbjct: 245 ERL---------MYRERGKN------KAAVRCVVLVPTRELGVQCVDVAKKLSAFMDVRI 289
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
IVGG+S + QE L+ RP++V+ TPGRL + + L TL +LDEADRM+
Sbjct: 290 SLIVGGLSLKSQEAELRTRPDIVIATPGRLIDHLRNSPSF--GLETLDVLILDEADRMLS 347
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
+G EL+ II Q C T RQT++FSAT+
Sbjct: 348 DGFADELKEII-----------------QACPT-------SRQTMLFSATMT-------- 375
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KEED 472
+ ++ L + R VD A L + F+ KE +
Sbjct: 376 ---------------DDVDALVRMSLNRPVKLFVDPKRST--ARGLIQEFVRVRAGKEAE 418
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ A L + + IVF S + + ILG+ LH + Q RL+
Sbjct: 419 RAALLVALCKRTFKQGVIVFFRSKKLAHQMRVVFGILGMKAEELHGDLTQEQRLR 473
>gi|226289015|gb|EEH44527.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides brasiliensis
Pb18]
Length = 546
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 182/411 (44%), Gaps = 86/411 (20%)
Query: 130 ETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKS 189
+TG +KK+ + + + P D ++ L L P L+ S
Sbjct: 85 DTGNNVQKKQSADADPIIAKDALATTAPSDG--------------SSFATLGLAPWLVGS 130
Query: 190 IYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKML 249
+ + K PT IQKACIP +G+D IG + TGSGKT+AF PI+Q+ E+
Sbjct: 131 LSTMAIKRPTAIQKACIPEIL-KGRDCIGGSRTGSGKTVAFAAPILQKWSED-------- 181
Query: 250 EDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQER 309
P G + A+++TPTRELALQ+ + +K ++ +++ + I GG Q
Sbjct: 182 -----------PFG-IFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAI 229
Query: 310 LLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENG---HFRELQSI 365
L RP VV+ TPGRL + + S G + L+ F VLDEADR++E+G +L++
Sbjct: 230 ALSQRPHVVIATPGRLADHINSSGRDTICGLNRARFVVLDEADRLLESGPGSMLADLETC 289
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ LP + RQTL+F+AT+
Sbjct: 290 LSALPPSTA----------------------RQTLLFTATVT-----------------P 310
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLT--NMCVLANKLEESFIECKEEDKDAYLYYILSV 483
V L S+ R + + + +++ N + L++S++ ++A+L+ +LS
Sbjct: 311 EVRALKSM----PRPASKPPIFVTEISTENQATIPRTLKQSYLLVPLTHREAFLHVLLST 366
Query: 484 HGQGR--TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
G I+FC + +L+ LG +LH+ + Q R S+
Sbjct: 367 DGNSSKAAIIFCNHTKTADLLERMLRRLGHRATSLHSLLPQSERTANLSRF 417
>gi|399046383|ref|ZP_10738806.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
gi|398055540|gb|EJL47607.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
Length = 492
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 168/357 (47%), Gaps = 73/357 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ P LM+ I L +KEPTPIQ+ IP +GKDVIG A+TG+GKT AF LPI+
Sbjct: 4 SFASFGFRPELMQGIQDLYYKEPTPIQEEAIPLIL-EGKDVIGQAQTGTGKTAAFMLPIL 62
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
RL D G K ++ALI+TPTREL++Q+ ++ + K ++V V
Sbjct: 63 NRL------------DAG--------KRDIQALILTPTRELSIQIAKEVEKLGKHLDVNV 102
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ + GG ++Q LK+ +VVGTPGR+ + M G H + TL VLDEAD+M+E
Sbjct: 103 LSLHGGTDIDRQLSKLKSTVHIVVGTPGRVLDHMKRGSLHFGRISTL---VLDEADKMME 159
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ +I P +RQ L+FSAT+ D K+
Sbjct: 160 MGFLEDVEQVIVHTP------------------------SQRQVLLFSATM---PDLVKR 192
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L H +K + IE G + V K+E+ + + DK
Sbjct: 193 LAHRFMKQPPHIK----IE------GKQKTV------------EKIEQFYYVVNQSDKTD 230
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L TIVF + ++ +++ L+ G+ L+ + Q R +L Q
Sbjct: 231 ALVDVLEQEQPFLTIVFANTQVRVQQLTARLQENGLTAQALYGDLSQSKREQLMRQF 287
>gi|254580545|ref|XP_002496258.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
gi|238939149|emb|CAR27325.1| ZYRO0C14234p [Zygosaccharomyces rouxii]
Length = 494
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 185/415 (44%), Gaps = 90/415 (21%)
Query: 118 GVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAW 177
++ QE++ K +G++K + KK KK K EE P+ E+L ++
Sbjct: 31 ALENQEKQTQKEASGEEKDESKKHKKAKVQEEE------PEYQGEDL----------QSF 74
Query: 178 NELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQR 237
N+L L P L+++ L F +PTPIQ IP A +G+D+IG A+TGSGKT AF +PI+ R
Sbjct: 75 NDLNLVPELIEACKNLNFDKPTPIQARAIPPAL-EGRDIIGLAQTGSGKTAAFAIPILNR 133
Query: 238 LLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVP 297
L E+++ A ++ PTRELA Q + + + VR
Sbjct: 134 LWEDKQP--------------------YYACVLAPTRELAQQTKETFDSLGALMGVRSTC 173
Query: 298 IVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENG 357
IVGGM+ Q R L +P +++ TPGRL + + + L L F V+DEADR+++
Sbjct: 174 IVGGMNMMDQARELMRKPHIIIATPGRLMDHLENTKGF--SLRKLRFLVMDEADRLLDME 231
Query: 358 HFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLK 417
L I+ ++P TQ+ R T +FSAT+ D KL+
Sbjct: 232 FGPVLDKILKVIP------------TQD-----------RTTYLFSATMTSKID---KLQ 265
Query: 418 HGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYL 477
SL N +T+ + L ++ + K+ YL
Sbjct: 266 RASLTEPVKCAVSNKYQTV----------------------DTLVQTLMVVPSGLKNTYL 303
Query: 478 YYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR---LKLF 529
Y+L+ + I+F + A +S+L +L + LH + Q R L LF
Sbjct: 304 IYLLNENIGKTVIIFTRTKANAERLSALCNLLEFNATALHGDLNQNQRTGALDLF 358
>gi|387902864|ref|YP_006333203.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
gi|387577756|gb|AFJ86472.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
Length = 493
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 67/352 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ L P ++K+I + PTPIQ IP G+DV+GAA+TG+GKT +F LPI+Q
Sbjct: 13 FDQFGLAPDILKAIVEQGYTTPTPIQAQAIPVVL-AGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
RLL +A +P H +RALI+TPTRELA QV ++ AK +R
Sbjct: 72 RLLPHASTSA-------------SPARHPVRALILTPTRELADQVAANVHAYAKHTALRS 118
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG+ Q L+ E+++ TPGRL + + ++ L + VLDEADRM++
Sbjct: 119 AVVFGGVDMNPQMAELRRGVEILIATPGRLLDHV---QQKTANLGQVQMLVLDEADRMLD 175
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ I+++LP K+RQTL+FSAT + KK
Sbjct: 176 MGFLPDLQRILNLLP------------------------KERQTLLFSATFSPEI---KK 208
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L L++ Q++ VA + TN V + + E DK A
Sbjct: 209 LASTYLRNPQTI-----------------EVARSNSTNANV-----TQIVYDVAEGDKQA 246
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ +L G + IVFC S ++ L+ G+ +H Q R++
Sbjct: 247 AVVQLLRGRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQ 298
>gi|433544706|ref|ZP_20501082.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
gi|432183978|gb|ELK41503.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
Length = 530
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 166/351 (47%), Gaps = 73/351 (20%)
Query: 182 LHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEE 241
P LM+ I L +KEPTPIQ+ IP +GKDVIG A+TG+GKT AF LPI+ RL
Sbjct: 10 FRPELMQGIQDLYYKEPTPIQEEAIPLIL-EGKDVIGQAQTGTGKTAAFMLPILNRL--- 65
Query: 242 REKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGG 301
D G K ++ALI+TPTREL++Q+ ++ + K ++V V+ + GG
Sbjct: 66 ---------DAG--------KRDIQALILTPTRELSIQIAKEVEKLGKHLDVNVLSLHGG 108
Query: 302 MSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRE 361
++Q LK+ +VVGTPGR+ + M G H + TL VLDEAD+M+E G +
Sbjct: 109 TDIDRQLSKLKSTVHIVVGTPGRVLDHMKRGSLHFGRISTL---VLDEADKMMEMGFLED 165
Query: 362 LQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSL 421
++ +I P +RQ L+FSAT+ D K+L H +
Sbjct: 166 VEQVIVHTP------------------------SQRQVLLFSATM---PDLVKRLAHRFM 198
Query: 422 KSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYIL 481
K + IE G + V K+E+ + + DK L +L
Sbjct: 199 KQPPHIK----IE------GKQKTV------------EKIEQFYYVVNQSDKTDALVDVL 236
Query: 482 SVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
TIVF + ++ +++ L+ G+ L+ + Q R +L Q
Sbjct: 237 EQEQPFLTIVFANTQVRVQQLTARLQENGLTAQALYGDLSQSKREQLMRQF 287
>gi|423133418|ref|ZP_17121065.1| hypothetical protein HMPREF9715_00840 [Myroides odoratimimus CIP
101113]
gi|423329024|ref|ZP_17306831.1| hypothetical protein HMPREF9711_02405 [Myroides odoratimimus CCUG
3837]
gi|371648682|gb|EHO14169.1| hypothetical protein HMPREF9715_00840 [Myroides odoratimimus CIP
101113]
gi|404603424|gb|EKB03078.1| hypothetical protein HMPREF9711_02405 [Myroides odoratimimus CCUG
3837]
Length = 415
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 173/352 (49%), Gaps = 72/352 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L+L+ ++++I L +KEPTPIQ+ IP + KD+IG A+TG+GKT AF +PI+
Sbjct: 2 TFEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAE-KDLIGCAQTGTGKTAAFAMPII 60
Query: 236 QRL--LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
L L +KA K + LI+TPTRELA+Q+ D+ + AK NV
Sbjct: 61 HYLHKLGNTKKAKKA-----------------KVLIVTPTRELAVQIGDNFEKYAKYTNV 103
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ + GGMS + Q L +V++GTPGRL +L +KHL +L L F VLDEAD M
Sbjct: 104 TYITLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDHLHFLVLDEADLM 160
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G +++ +I + P SN RQTL+FSAT+ L
Sbjct: 161 LDMGFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPLPI--- 193
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++L H L+ + V +++ +S A + K + F+E + DK
Sbjct: 194 RELAHEFLQKPEYV----AVDPISSTAQ----------------SVKQKVYFVE--KGDK 231
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
LY+I+ +VF + A + LK G++ H M Q AR
Sbjct: 232 KKLLYHIIRNEKLSDVLVFTRTKAGADTVVESLKKNGVNAEPFHGDMSQTAR 283
>gi|225681783|gb|EEH20067.1| ATP-dependent RNA helicase dbp8 [Paracoccidioides brasiliensis
Pb03]
Length = 546
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 182/411 (44%), Gaps = 86/411 (20%)
Query: 130 ETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKS 189
+TG +KK+ + + + P D ++ L L P L+ S
Sbjct: 85 DTGNNVQKKQSADADPIIAKDALATTAPSDG--------------SSFATLGLAPWLVGS 130
Query: 190 IYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKML 249
+ + K PT IQKACIP +G+D IG + TGSGKT+AF PI+Q+ E+
Sbjct: 131 LSTMAIKRPTAIQKACIPEIL-KGRDCIGGSRTGSGKTVAFAAPILQKWSED-------- 181
Query: 250 EDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQER 309
P G + A+++TPTRELALQ+ + +K ++ +++ + I GG Q
Sbjct: 182 -----------PFG-IFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAI 229
Query: 310 LLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENG---HFRELQSI 365
L RP VV+ TPGRL + + S G + L+ F VLDEADR++E+G +L++
Sbjct: 230 ALSQRPHVVIATPGRLADHINSSGRDTICGLNRARFVVLDEADRLLESGPGSMLADLETC 289
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ LP + RQTL+F+AT+
Sbjct: 290 LSALPPSTA----------------------RQTLLFTATVT-----------------P 310
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLT--NMCVLANKLEESFIECKEEDKDAYLYYILSV 483
V L S+ R + + + +++ N + L++S++ ++A+L+ +LS
Sbjct: 311 EVRALKSM----PRPASKPPIFVTEISTENQATIPRTLKQSYLLVPLTHREAFLHVLLST 366
Query: 484 HGQGR--TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
G I+FC + +L+ LG +LH+ + Q R S+
Sbjct: 367 DGNSSKAAIIFCNHTKTADLLERMLRRLGHRATSLHSLLPQSERTANLSRF 417
>gi|73997167|ref|XP_534885.2| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Canis lupus familiaris]
Length = 456
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 171/372 (45%), Gaps = 76/372 (20%)
Query: 155 NGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
+ P + + V E E T + +L + +L ++ +L + +PT IQ IP A QG+
Sbjct: 8 DSPAEEPQPAVQEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGR 62
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LPI+ LLE ++ L AL++TPTR
Sbjct: 63 DIIGLAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTR 102
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+++ + + I V+ IVGG+ + Q L +P +V+ TPGRL + + +
Sbjct: 103 ELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKG 162
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L L + V+DEADR++ E+ I+ ++P
Sbjct: 163 F--NLRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------ 196
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 197 RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV------------------ 235
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 236 ----EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAI 291
Query: 515 TLHAQMQQRARL 526
LH QM Q RL
Sbjct: 292 PLHGQMSQSKRL 303
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 171/378 (45%), Gaps = 80/378 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L +L ++ L+F +PT IQ+ IP A QGKDVIG AETGSGKT AF LP++
Sbjct: 83 FADLGLAEVLCEACATLKFTKPTEIQRRSIPLAL-QGKDVIGLAETGSGKTAAFALPVLH 141
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LL KG K AL++ PTRELA Q+ + I ++
Sbjct: 142 DLLAT----------KG--------KKEFFALVLAPTRELAFQIRQTFNALGSPIGLKSA 183
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+ Q L +P V++ TPGRL + + + L L + ++DEADRM+
Sbjct: 184 VLVGGIDMTTQAIALAKKPHVLIATPGRLVDHLENTKG--FHLKALRYLIMDEADRMLNM 241
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ +EL I+ ++P ++R+T +FSAT+ KL
Sbjct: 242 DYEKELDKILAVIP------------------------RERRTFLFSATMTSKVG---KL 274
Query: 417 KHGSLKS--KQSVNG-LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
+ SL+ K VN +++TL +R ++ ++ K
Sbjct: 275 QRASLRDPVKVEVNSKYKTVDTLIQR-------------------------YMFVPQKFK 309
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL----KLF 529
D YL Y+++ I+FC++ + + +L+ LG D LH QM Q RL K
Sbjct: 310 DCYLIYLMNQLRGNSFIIFCSTCNNVMKATLVLRDLGFDAVCLHGQMSQPKRLGALAKFT 369
Query: 530 SQMITWIRKRPKGDRGKD 547
SQ T + RG D
Sbjct: 370 SQSHTILVATDVASRGLD 387
>gi|395763810|ref|ZP_10444479.1| ATP-dependent RNA helicase [Janthinobacterium lividum PAMC 25724]
Length = 515
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 166/351 (47%), Gaps = 67/351 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ + L P + +++ + PTPIQ+ IP QG+DV+GAA+TG+GKT F LPI+Q
Sbjct: 39 FADFGLAPEIQRALTDQGYTHPTPIQEQAIPVVL-QGRDVMGAAQTGTGKTAGFSLPIIQ 97
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
L+ + +P H +RALI+TPTRELA+QV +++K AK +R
Sbjct: 98 LLM-------------AHASSSMSPARHPVRALILTPTRELAVQVAENVKAYAKHTPLRS 144
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GGM + Q LL+ E+V+ TPGRL + + E+ + L + V+DEADRM++
Sbjct: 145 TVVFGGMDMKPQTVLLRGGVEIVIATPGRLLDHI---EQKNISLSQVQMLVMDEADRMLD 201
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ II++LP K+RQ L+FSAT + KK
Sbjct: 202 MGFLPDLQRIINLLP------------------------KQRQNLMFSATFSPEI---KK 234
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L L ++ S +T A+K+ + + E+ K A
Sbjct: 235 LAATFLNDPLTIEVARSNQT----------------------ADKVTQVVYKVSEDQKHA 272
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ ++L + IVF + ++ +L+ G+ +H Q+ R+
Sbjct: 273 LVAHLLRQRDLKQVIVFSNTKIGASRLARVLEQEGMSATAIHGDKSQQERM 323
>gi|373108568|ref|ZP_09522850.1| hypothetical protein HMPREF9712_00443 [Myroides odoratimimus CCUG
10230]
gi|423129762|ref|ZP_17117437.1| hypothetical protein HMPREF9714_00837 [Myroides odoratimimus CCUG
12901]
gi|371646685|gb|EHO12196.1| hypothetical protein HMPREF9712_00443 [Myroides odoratimimus CCUG
10230]
gi|371647785|gb|EHO13280.1| hypothetical protein HMPREF9714_00837 [Myroides odoratimimus CCUG
12901]
Length = 415
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 173/352 (49%), Gaps = 72/352 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ +L+L+ ++++I L +KEPTPIQ+ IP + KD+IG A+TG+GKT AF +PI+
Sbjct: 2 TFEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAE-KDLIGCAQTGTGKTAAFAMPII 60
Query: 236 QRL--LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
L L +KA K + LI+TPTRELA+Q+ D+ + AK NV
Sbjct: 61 HYLHKLGNTKKAKKA-----------------KVLIVTPTRELAVQIGDNFEKYAKYTNV 103
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ + GGMS + Q L +V++GTPGRL +L +KHL +L L F VLDEAD M
Sbjct: 104 TYITLYGGMSIKPQIEQLNKGADVIIGTPGRLLDLYK--QKHL-DLDHLHFLVLDEADLM 160
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G +++ +I + P SN RQTL+FSAT+ L
Sbjct: 161 LDMGFIDDVKKLIQLTP----SN--------------------RQTLLFSATMPLPI--- 193
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
++L H L+ + V +++ +S A + K + F+E + DK
Sbjct: 194 RELAHEFLQKPEYV----AVDPISSTAQ----------------SVKQKVYFVE--KGDK 231
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
LY+I+ +VF + A + LK G++ H M Q AR
Sbjct: 232 KKLLYHIIRNEKLSDVLVFTRTKAGADTVVESLKKNGVNAEPFHGDMSQTAR 283
>gi|393220360|gb|EJD05846.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 450
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + L++++ ++ FK+PT IQ +P A G+D+IG AETGSGKT+AF LPI+Q
Sbjct: 17 FKELGVIGPLLEALEQMNFKKPTDIQAEALPHAI-SGRDIIGVAETGSGKTVAFALPILQ 75
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RL EE PKG L A ++ PTRELA Q++ + + I VR
Sbjct: 76 RLWEE-------------------PKG-LFACVLAPTRELAYQISQQFESLGSAIGVRCA 115
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM+ Q L RP +VV TPGRL + + + L + F VLDEADR+++
Sbjct: 116 VIVGGMNMVDQAVALAKRPHIVVATPGRLNDHLENTKGF--SLRGIKFLVLDEADRLLDM 173
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ I+ ++P K+R T +FSAT+ KL
Sbjct: 174 DFGPIIDKILKVIP------------------------KERTTYLFSATMTTKV---AKL 206
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL N V+++ + L + ++ + K+
Sbjct: 207 QRASL----------------------TNPVRVEVSKKYTTVSTLLQYYLFIPYKQKEVN 244
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L ++ + Q I+F ++ + ++ +LK LG LH Q+ Q ARL
Sbjct: 245 LIHMCNTLSQNSIIIFTRTVMDCQRLALILKTLGFSSVPLHGQLSQSARL 294
>gi|226312984|ref|YP_002772878.1| ATP-dependent RNA helicase [Brevibacillus brevis NBRC 100599]
gi|226095932|dbj|BAH44374.1| probable ATP-dependent RNA helicase [Brevibacillus brevis NBRC
100599]
Length = 529
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 74/354 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ LH ++++I+ + F+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-DGGDLIGQAQTGTGKTAAFGIPLV- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 62 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II+ +P +RQTL+FSAT+ K+L
Sbjct: 159 GFIEDIETIINHMP------------------------DERQTLLFSATMPPEI---KRL 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K Q++ ++ V A +E+ + + + +K
Sbjct: 192 ATRYMKQPQTIA----------------------VSREEVTAPLIEQVYYKVFDRNKVES 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L IL I+FC + + +S +L+ G LH + Q R K+ +
Sbjct: 230 LCRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMN 283
>gi|154298930|ref|XP_001549886.1| hypothetical protein BC1G_11712 [Botryotinia fuckeliana B05.10]
gi|160380630|sp|A6SFV4.1|DBP8_BOTFB RecName: Full=ATP-dependent RNA helicase dbp8
gi|347836724|emb|CCD51296.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 195/414 (47%), Gaps = 79/414 (19%)
Query: 120 QKQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNG----PDDAEEELVNEAEISTEFD 175
Q+ +K++ + K K K ++ VSNG P DA+ T F
Sbjct: 70 QEPTQKDIPLIATTSVPSRVKAKSQKNSLDAKNVSNGATLAPTDAQ----------TTFA 119
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
A N + P L+ S+ + K PT IQK CIP +G+D IG + TGSGKT+AF +PI+
Sbjct: 120 ALN---VKPWLVGSLGSMAIKRPTGIQKGCIPEIL-KGRDCIGGSRTGSGKTVAFAVPIL 175
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+ E+ P G + AL++TPTRELALQ+ + K ++ +++
Sbjct: 176 QKWAED-------------------PFG-IFALVLTPTRELALQIYEQFKAISSPQSLKA 215
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
V I GG Q L RP +V+ TPGRL + + + GE + L + VLDEADR++
Sbjct: 216 VLITGGSDMRPQATALAQRPHIVIATPGRLADHIRTSGEDTIGALRRVRMVVLDEADRLL 275
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
+G S+ MLP + C+++ KRQTL+F+AT+ + + R
Sbjct: 276 ASG------SVGSMLP-----------DVEECLSILP-PPAKRQTLLFTATV--TPEVR- 314
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+LK G + V VD T + L + ++ ++
Sbjct: 315 -----ALKDMPRTPG-----------KLPVFVCEVD-TQALAIPPSLNQMHLQVPVTHRE 357
Query: 475 AYLY-YILSVHGQGRTIV-FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL+ ++L+ ++IV FC A +++ LL++L V LH+++ QR R+
Sbjct: 358 HYLHMFLLTEKNLPKSIVIFCNRTATADYLTHLLRLLDHRVTALHSKLPQRQRI 411
>gi|328720638|ref|XP_001950474.2| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Acyrthosiphon pisum]
Length = 470
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 157/354 (44%), Gaps = 76/354 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L L L + + PT IQK CIP G D IG A+TGSGKTLAF LPI+Q
Sbjct: 3 FENLNLSKYLCDQLKAVGVNSPTEIQKNCIPKIL-DGIDCIGCAKTGSGKTLAFALPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L EE P G + ALI+TPTRELA Q+ D + K N+R
Sbjct: 62 KLWEE-------------------PYG-IFALILTPTRELAYQIADQFAVIGKPKNLRHC 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM Q R L +P +VV TPGRL + + + L + F VLDEADR++
Sbjct: 102 VVTGGMEMIVQARELSNKPHIVVSTPGRLADHLESCDT--FSLKRIQFLVLDEADRLLGG 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+++ +I LP K+RQTL+FSAT+ D +K+
Sbjct: 160 KFDKQIATIFKALP------------------------KERQTLLFSATM---TDTLEKV 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + K+ ++T+ E LE+ ++ C KD Y
Sbjct: 193 KMITKKNTFVYESTAEVKTVDE----------------------LEQFYVLCPYNVKDGY 230
Query: 477 LYYILSVHGQ----GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L I+ + G ++F + + + L +G D +LHA + QR RL
Sbjct: 231 LVEIVRQFREKDEKGLIMIFTDTCKNCQLLHMTLNEVGFDTVSLHAMISQRQRL 284
>gi|68487950|ref|XP_712192.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|68488947|ref|XP_711718.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|74656119|sp|Q59PR3.1|DBP8_CANAL RecName: Full=ATP-dependent RNA helicase DBP8
gi|46433039|gb|EAK92496.1| hypothetical protein CaO19.6652 [Candida albicans SC5314]
gi|46433563|gb|EAK92999.1| hypothetical protein CaO19.13973 [Candida albicans SC5314]
gi|238880002|gb|EEQ43640.1| hypothetical protein CAWG_01884 [Candida albicans WO-1]
Length = 440
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 169/353 (47%), Gaps = 65/353 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++N+L + L +S+ ++ PT IQ ACIPA +G D IG A+TGSGKT+AF P++
Sbjct: 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAIL-KGHDCIGGAKTGSGKTIAFAAPML 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+ E+ P G + LI+TPTRELALQ+ + + +N++V
Sbjct: 61 TQWSED-------------------PFG-IFGLILTPTRELALQIAEQFAALGANMNIKV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
+VGG +Q L+ +P V+ TPGRL + +++ GE+ + L + + VLDEADR++
Sbjct: 101 AVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLL 160
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
N +LQ D+LP ++ KRQTL+F+ATI D +
Sbjct: 161 SNSFGSDLQRCFDVLPTSD----------------------KRQTLLFTATI---TDAVR 195
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
LK + ++ +ET+ + A + + L+ S++ K+
Sbjct: 196 ALKEKPPTPGKPPVFMHEVETVDKVA----------------IPSTLQISYVFVPSYVKE 239
Query: 475 AYLYYILSV--HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
AYL IL + ++F + +L+ L V +LH++M Q R
Sbjct: 240 AYLNSILHLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSER 292
>gi|358399923|gb|EHK49260.1| hypothetical protein TRIATDRAFT_143973 [Trichoderma atroviride IMI
206040]
Length = 479
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 180/404 (44%), Gaps = 80/404 (19%)
Query: 132 GKKKKKKKKGKKIKT-VEESVAVSNGPDDAEEELVNEAEISTEFDA--------WNELRL 182
G K++K G + E+ A PD EE ++++ DA + EL +
Sbjct: 3 GSKRQKVANGAPARREPAEATASQTSPDPHTEEESVTLDVASTADAAEAEEPKTFKELGI 62
Query: 183 HPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEER 242
L ++ L +K PT IQ IP A QG+DVIG AETGSGKT AF LPI+Q LLE+
Sbjct: 63 VDSLCEACESLNYKTPTSIQARSIPVAL-QGRDVIGLAETGSGKTAAFALPILQALLEKP 121
Query: 243 EKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGM 302
+ L++ PTRELA Q+ + + I++R IVGG+
Sbjct: 122 QP--------------------FFGLVLAPTRELAAQIGQSFEALGALISLRCAVIVGGL 161
Query: 303 STEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFREL 362
Q L +P ++V TPGRL + + + L +L + V+DEADR+++ +
Sbjct: 162 DMVPQAIALGKKPHIIVATPGRLVDHLEKTKGF--SLRSLKYLVMDEADRLLDMDFGPSI 219
Query: 363 QSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLK 422
I+ +P ++R+T +FSAT++
Sbjct: 220 DKILKFIP------------------------RERRTYLFSATMS--------------- 240
Query: 423 SKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILS 482
+ +E+L +RA +R + +N + L + ++ + KD YL Y+++
Sbjct: 241 --------SKVESL-QRASLRDPARVSVSSNKYQTVSTLLQHYVFIPHKRKDTYLIYLVN 291
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
I+F ++ + ++ LL+ LG LH Q+ Q ARL
Sbjct: 292 EFAGKSIIIFTRTVFEAQRVAILLRTLGFGAIPLHGQLSQSARL 335
>gi|385203300|ref|ZP_10030170.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
gi|385183191|gb|EIF32465.1| DNA/RNA helicase, superfamily II [Burkholderia sp. Ch1-1]
Length = 491
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 171/364 (46%), Gaps = 67/364 (18%)
Query: 165 VNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGS 224
+++ ++ +++ L P ++K++ + PTPIQ+ IP G+D++GAA+TG+
Sbjct: 1 MSDTPVTPSTSTFDQFGLAPDILKAVKESGYTIPTPIQEQAIPVVL-AGRDMMGAAQTGT 59
Query: 225 GKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDH 283
GKT +F LPI+QRLL + +A +P H +RALI+TPTRELA QV +
Sbjct: 60 GKTASFSLPIIQRLLPQASTSA-------------SPARHPVRALILTPTRELADQVAAN 106
Query: 284 LKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLS 343
++ AK +R + GG+ Q L+ E+++ TPGRL + + ++ L +
Sbjct: 107 VQAYAKHTALRSAVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQ 163
Query: 344 FFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRM++ G +LQ I+++LP K+RQTL+FS
Sbjct: 164 ILVLDEADRMLDMGFLPDLQRILNLLP------------------------KERQTLLFS 199
Query: 404 ATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEE 463
AT S + KKL L+ Q++ S T A + +
Sbjct: 200 AT--FSGEI-KKLAATYLRDPQTIEVARSNST----------------------ATNVRQ 234
Query: 464 SFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQR 523
E E DK + ++ G + IVFC S ++ L+ G+ +H Q
Sbjct: 235 IVYEVAEGDKTGAVVQLIRERGLKQVIVFCNSKIGASRLARSLERDGVIATAIHGDRSQN 294
Query: 524 ARLK 527
R++
Sbjct: 295 ERMQ 298
>gi|359684155|ref|ZP_09254156.1| ATP-dependent RNA helicase [Leptospira santarosai str. 2000030832]
Length = 514
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKFKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L + +LDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLDDIKIVILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNIKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|227538144|ref|ZP_03968193.1| ATP-dependent RNA helicase [Sphingobacterium spiritivorum ATCC
33300]
gi|227241987|gb|EEI92002.1| ATP-dependent RNA helicase [Sphingobacterium spiritivorum ATCC
33300]
Length = 435
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 68/349 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L ++K++ ++ PTPIQ+ IP Q KD++ A+TG+GKT AF +PI+Q
Sbjct: 20 FKDLKLIAPILKALEASGYQNPTPIQEQAIPII-FQRKDLLACAQTGTGKTAAFAIPILQ 78
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L +EK A+ +R L++TPTRELA+Q+ ++ +K + +R +
Sbjct: 79 MLTYSKEKTAQ---------------KRIRTLVLTPTRELAIQIKENFDAYSKELPIRNL 123
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+ + Q L+ ++++ TPGRL +L + G ++L L +FVLDEADRM++
Sbjct: 124 VIYGGVGQQPQRDALRKGIDILIATPGRLLDLYNQG---FIDLKQLEYFVLDEADRMLDM 180
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ +I ++P KKRQTL+FSAT + A+ +K
Sbjct: 181 GFIHDVKKVISIIP------------------------KKRQTLLFSAT--MPAEIQKLA 214
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
H L E + V++T A K+++S + DK
Sbjct: 215 SH----------------ILEEPSK-------VEVTPESTTAEKIQQSVYFVSKSDKRHL 251
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L ++L T+VF + I+ L GI +H Q AR
Sbjct: 252 LTHLLKSENIEHTLVFSRTKHGADRIAKDLAKQGIQAAAIHGNKSQSAR 300
>gi|193641157|ref|XP_001946607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Acyrthosiphon pisum]
Length = 721
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 41/350 (11%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W E + +M+ I ++ +KEPTPIQ+ IP Q +D+IG AETGSGKTLA+ +P
Sbjct: 294 WKESTIKSEIMEIIEKVGYKEPTPIQRQAIPIG-FQNRDIIGVAETGSGKTLAYLIP--- 349
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E + KM ++ + Y+ +I+ PTRELA Q+ + + + +R V
Sbjct: 350 -LIEWIQSLPKMEREEDVDQGPYS-------IILAPTRELAQQIEEETLKFGQPLGIRTV 401
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDEADRMI+
Sbjct: 402 VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDEADRMIDM 458
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIALSADFRKK 415
G ++Q I++ +P+TN + + ++ + + +KK RQT++F+AT+
Sbjct: 459 GFEPDVQKILEYMPVTNLKPDNEDAEDESKLLANYYTKKKYRQTVMFTATMP-------- 510
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
++E L+ R +R A+V + ++ + E+ E DK
Sbjct: 511 ---------------PAVERLA-RTYLR-RPAVVYIGSIGKPVERTEQIVHMMSENDKRK 553
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L ILS I+F ++ L+ LG + TLH Q R
Sbjct: 554 RLIEILSRKVDPPIIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQR 603
>gi|261404961|ref|YP_003241202.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261281424|gb|ACX63395.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. Y412MC10]
Length = 506
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 42/230 (18%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L + P+++K++ + +K PTPIQ IPA G+D++G A+TG+GKT AF +P++Q
Sbjct: 3 FENLNISPVILKALAKENYKAPTPIQAQAIPAVL-AGRDLLGCAQTGTGKTAAFSVPMIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L ++ K +RAL+++PTRELALQ++D++K ++ +R
Sbjct: 62 LL--------------NQQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRST 107
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+S + QER L+ ++++ TPGRL +LM+ +KH V+L + VLDEADRM++
Sbjct: 108 AIVGGVSQKTQERALQQGADILIATPGRLLDLMN--QKH-VDLQHVEILVLDEADRMLDM 164
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
G +++ II +P K+QTL FSAT+
Sbjct: 165 GFIHDVKRIIAKMP------------------------SKKQTLFFSATM 190
>gi|351711397|gb|EHB14316.1| Putative ATP-dependent RNA helicase DDX47 [Heterocephalus glaber]
Length = 454
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 172/376 (45%), Gaps = 74/376 (19%)
Query: 151 VAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAA 210
+A S D EE + + E + +L + +L ++ +L + +PT IQ IP A
Sbjct: 1 MAASGEHDSLPEE--PQPTVEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPMAL 58
Query: 211 HQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALII 270
QG+D+IG AETGSGKT AF LPI+ LL+ ++ L AL++
Sbjct: 59 -QGRDIIGLAETGSGKTGAFALPILNALLDTPQR--------------------LFALVL 97
Query: 271 TPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMS 330
TPTRELA Q+++ + + I V+ IVGG+ + Q L +P VV+ TPGRL + +
Sbjct: 98 TPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHVVIATPGRLIDHLE 157
Query: 331 GGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS 390
+ L L + V+DEADR++ E+ I+ ++P
Sbjct: 158 NTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKVIP-------------------- 195
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVD 450
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 196 ----RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV-------------- 234
Query: 451 LTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILG 510
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG
Sbjct: 235 --------EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLG 286
Query: 511 IDVWTLHAQMQQRARL 526
LH QM Q RL
Sbjct: 287 FTAIPLHGQMSQSKRL 302
>gi|295671282|ref|XP_002796188.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284321|gb|EEH39887.1| ATP-dependent RNA helicase DBP8 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 543
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 184/401 (45%), Gaps = 74/401 (18%)
Query: 140 KGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPT 199
K K + V++ + P ++ L + ++ ++ L L P L+ S+ + K PT
Sbjct: 80 KKKPVNNVQKKQSADADPITVKDALATKTP--SDGSSFATLGLAPWLVGSLSAMAIKRPT 137
Query: 200 PIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKY 259
IQKACIP +G+D IG + TGSGKT+AF PI+Q+ E+
Sbjct: 138 AIQKACIPEIL-KGRDCIGGSRTGSGKTVAFAAPILQKWSED------------------ 178
Query: 260 APKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVV 319
P G + A+++TPTRELALQ+ + +K ++ +++ + I GG Q L RP VV+
Sbjct: 179 -PLG-IFAVVLTPTRELALQIFEQIKAISAPQSLKPILITGGTEMRPQAIALSQRPHVVI 236
Query: 320 GTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENG---HFRELQSIIDMLPMTNGS 375
TPGRL + + S G + L+ F VLDEADR++E+G +L++ + LP +
Sbjct: 237 ATPGRLADHINSSGRDTICGLNRARFVVLDEADRLLESGPGSMLPDLETCLSALPPSTA- 295
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIET 435
RQTL+F+AT+ V L S+
Sbjct: 296 ---------------------RQTLLFTATVT-----------------PEVRALKSM-- 315
Query: 436 LSERAGMRANVAIVDLT--NMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGR--TIV 491
R + + + +++ N + L++S++ ++A+L+ +LS G I+
Sbjct: 316 --PRPASKPPIFVTEISTENQATIPRTLKQSYLLVPLTHREAFLHVLLSTEGNSSKAAII 373
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
FC + +L+ LG +LH+ + Q R S+
Sbjct: 374 FCNRTKTADLLERMLRRLGHRATSLHSLLPQSERTANLSRF 414
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 165/358 (46%), Gaps = 68/358 (18%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
ST D + ++ L ++K+I L F +PTPIQ + IP A GKD++G A TGSGKT AF
Sbjct: 170 STTCDTFLQMNLSRPILKAISSLGFTKPTPIQASTIPVALL-GKDIVGNAVTGSGKTAAF 228
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
+P+++RLL +KG+ A R LI+ PTRELA+Q + K +
Sbjct: 229 MIPMLERLL---------YREKGKRA------AATRCLILLPTRELAVQCYEVGKRLGAH 273
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
+++ +VGG+S + QE L+ RP+VV+ TPGRL + + L +L VLDEA
Sbjct: 274 TDIQFCLLVGGLSLKAQEAALRQRPDVVLATPGRLIDHVRNSVG--FNLDSLDILVLDEA 331
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DRM+ G EL II P K RQT++FSAT+ S
Sbjct: 332 DRMLSEGFADELTEIIKACP------------------------KSRQTMLFSATMTDSV 367
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC-K 469
D K+ S+N + +R+ R L + F+ K
Sbjct: 368 DELIKM---------SLNKPVRLFVDPKRSTARG----------------LIQEFVRIRK 402
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E D+ A L + + + I+F S + + +LG+ LH + Q RL+
Sbjct: 403 ESDRPAMLVALCKQTYKHKVIIFVRSKKLAHQMRIVFSLLGMKCAELHGDLSQEQRLQ 460
>gi|452845761|gb|EME47694.1| hypothetical protein DOTSEDRAFT_77927 [Dothistroma septosporum
NZE10]
Length = 1056
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 176/397 (44%), Gaps = 94/397 (23%)
Query: 148 EESVAVSNGPDDA-EEELVNEAEISTE-------FDAWNELRLHPLLMKSIYRLQFKEPT 199
EE V+ S DDA E E N E A++ + L ++K + + F +PT
Sbjct: 496 EEPVSASEAGDDAAEREKANAFFADGESKKTGPTATAFHSMNLSRPILKGLASVGFDKPT 555
Query: 200 PIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKY 259
PIQ +P A +GKD++G A TGSGKT AF +PI++RLL Y
Sbjct: 556 PIQMKAVPVAL-EGKDLVGGAVTGSGKTAAFLIPILERLL-------------------Y 595
Query: 260 APK--GHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEV 317
PK R I+ PTRELALQ + K ++ ++ V VGG+S ++Q++ LK RP++
Sbjct: 596 RPKRTSMTRVAILMPTRELALQCFNVAKKLSAFTDISVAMAVGGLSIKEQDKELKMRPDI 655
Query: 318 VVGTPGRLWELMSGGEKHL--VELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGS 375
V+ TPGR +L E++ +++ T+ VLDEADRM+E G EL I+ +P
Sbjct: 656 VIATPGRFIDL----ERNYRSLDVGTIEILVLDEADRMLEEGFADELNEILSKIP----- 706
Query: 376 NKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD------FRKKLKHGSLKSKQSVNG 429
K RQT++FSAT+ D ++ ++ KQ+V+G
Sbjct: 707 -------------------KSRQTMLFSATMTTKVDDLVRSGLQRPVRLMVDAQKQTVSG 747
Query: 430 LNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRT 489
L E + R G +E+ + YL Y+ R
Sbjct: 748 LTQ-EFVRLRPG---------------------------REQKRLGYLMYLCEKVYTDRV 779
Query: 490 IVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
I+F + + + G+ LH M Q R+
Sbjct: 780 IIFFRQKKEAHRVRVIFALCGLKAAELHGSMSQEQRI 816
>gi|241958758|ref|XP_002422098.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645443|emb|CAX40099.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 440
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 169/353 (47%), Gaps = 65/353 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++N+L + L +S+ ++ PT IQ ACIPA +G D IG A+TGSGKT+AF P++
Sbjct: 2 SFNDLGVARWLSESLDAMKIYTPTSIQSACIPAIL-KGHDCIGGAKTGSGKTIAFAAPML 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
R E+ P G + LI+TPTRELALQ+ + + +N++V
Sbjct: 61 TRWSED-------------------PFG-IFGLILTPTRELALQIAEQFAALGANMNIKV 100
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
+VGG +Q L+ +P V+ TPGRL + +++ GE+ + L + + VLDEADR++
Sbjct: 101 AVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLL 160
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
N +LQ D+LP ++ KRQTL+F+ATI D +
Sbjct: 161 SNSFGSDLQRCFDVLPPSD----------------------KRQTLLFTATI---TDAVR 195
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
LK + ++ +ET+ + A + + L+ S++ K+
Sbjct: 196 ALKEKPPTPGKPPVFMHEVETVDKVA----------------IPSTLQISYVFVPSYVKE 239
Query: 475 AYLYYILSV--HGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
AYL IL + ++F + +L+ L V +LH++M Q R
Sbjct: 240 AYLNSILHLEQFKDSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSER 292
>gi|340753231|ref|ZP_08690020.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|422315292|ref|ZP_16396730.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
gi|229422830|gb|EEO37877.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|404592614|gb|EKA94414.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
Length = 529
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 72/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQK IPA KD+IG A+TG+GKT AF LPI++
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQKLTIPALLKNDKDIIGQAQTGTGKTAAFSLPIIE 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E ++ H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 70 NF---------------ETSDH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 109
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 110 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 166
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN ++ L FSAT+ K+
Sbjct: 167 GFIEDIEKI---LTFTNDD---------------------KRMLFFSATMPPEI---MKI 199
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K E +++ DLT E+ + E E DK
Sbjct: 200 AKTHMKE-------------YEVLAVKSRELTTDLT---------EQIYFEVNERDKFEA 237
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 238 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 286
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 76/357 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +++L +++ + L F++PTPIQ IP A GKD++GAA TGSGKT AF +PI+
Sbjct: 232 SFQDMKLSRPILRGLSSLNFEDPTPIQSKTIPVAL-LGKDIVGAAVTGSGKTAAFVVPIL 290
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RL+ Y PK R LII PTRELA+Q + K +A ++
Sbjct: 291 ERLV-------------------YRPKKIPTSRVLIICPTRELAMQCHNVAKRIAAFTDI 331
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ VGG+S + QE+ L+ RP++++ TPGR + + + V+ + V+DEADRM
Sbjct: 332 TLCLCVGGLSLKVQEQELRKRPDIIIATPGRFIDHVRNSQGFSVD--NIEIMVIDEADRM 389
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ + P K RQT++FSAT+ D
Sbjct: 390 LEDGFADELNEIVKLCP------------------------KSRQTMLFSATMTEKVDDL 425
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KE 470
+L S+N I +++A A +L + FI +E
Sbjct: 426 VRL---------SLNRPVRIFVDAKKA----------------TAKRLVQEFIRVRPQRE 460
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ + A L +I R I+F + A + + ++G++ +H + Q R++
Sbjct: 461 QLRPAMLVHICKTFFHRRVIIFFRNKAFAHKMRIIFGLVGLNATEIHGSLSQEQRVR 517
>gi|90578695|ref|ZP_01234505.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
gi|90439528|gb|EAS64709.1| putative ATP-dependent RNA helicase, DEAD boxfamily protein
[Photobacterium angustum S14]
Length = 427
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 167/353 (47%), Gaps = 62/353 (17%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L LHP L+K++ L + PT +Q+ IP A +G DV+ A+TG+GKT AF LP++
Sbjct: 2 SFQSLNLHPNLLKALTELGYSTPTDVQQQAIPLAL-KGDDVMAGAQTGTGKTAAFALPLL 60
Query: 236 QRLL---EEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
QRL+ + E+ + +E+ + + ++RALI+TPTRELA QV D + AK
Sbjct: 61 QRLMTLPSQAEQVSTAIENN------HKSRNNIRALILTPTRELAQQVYDSITTYAKYTE 114
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
++V GG S Q + L A E++V TPGRL + + G L E+ T FVLDEADR
Sbjct: 115 IKVAVAYGGTSMNVQVKALNAGAEILVATPGRLLDHVFNGSVSLSEVET---FVLDEADR 171
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M++ G ++Q I+ +P +RQTL FSAT F
Sbjct: 172 MLDMGFIVDIQRIMKRMP------------------------AERQTLFFSAT------F 201
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
K++K + + N +V++T A +E+ +
Sbjct: 202 SKQVKKLAFD-------------------ILTNPKMVEVTPANTAAETVEQMVYPVDKHR 242
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L Y++ + +VF + ++ L + GI +++ Q AR
Sbjct: 243 KAELLAYLIGSRNWRQVLVFTKTKQGSDQLAKDLGLDGIKASSINGDKSQGAR 295
>gi|212527694|ref|XP_002144004.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
gi|210073402|gb|EEA27489.1| ATP dependent RNA helicase (Dbp8), putative [Talaromyces marneffei
ATCC 18224]
Length = 538
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 183/396 (46%), Gaps = 65/396 (16%)
Query: 143 KIKTVEESVAVSNGPDDAEEELVNEAE---ISTEFDAWNELRLHPLLMKSIYRLQFKEPT 199
+IK + A SN P + E +A + + L + P L+KS+ + + PT
Sbjct: 73 RIKKKSDVSAASNAPSNEEPVSSRDARDIGLQVTDSTFATLNVAPWLVKSLSTMAIRRPT 132
Query: 200 PIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKY 259
IQK+CIP +GKD IG + TGSGKT+AF +PI+Q+ E+
Sbjct: 133 AIQKSCIPEIL-KGKDCIGGSRTGSGKTIAFAVPILQKWAED------------------ 173
Query: 260 APKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVV 319
P G A+++TPTRELALQ+ + K ++ +++ V I GG Q L RP V++
Sbjct: 174 -PFGVF-AVVLTPTRELALQIFEQFKAISAPQSLKPVLITGGTDMRPQAIALSQRPHVII 231
Query: 320 GTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKG 378
TPGRL + + + GE +V L+ + V+DEADR++ +G MLP
Sbjct: 232 ATPGRLADHIRTSGEDTIVGLNRVRMVVMDEADRLLTSGQG-------SMLP-------- 276
Query: 379 QSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSE 438
+ C++ +RQTL+F+AT+ V L S+ +
Sbjct: 277 ---DVETCLSALP-PSSERQTLLFTATVT-----------------PEVRALKSMPRPAN 315
Query: 439 RAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSV--HGQGRTIVFCTSI 496
R + +V + N + L++++++ ++A+L+ +LS + I+FC
Sbjct: 316 RPPI--HVTEIGTENHAPIPPTLKQTYLQVPMTHREAFLHVLLSTERNSTKPAIIFCNRT 373
Query: 497 AALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+ +L+ L V +LH+ + Q R S+
Sbjct: 374 RTADLLERILRRLSHRVTSLHSLLPQSERTANLSRF 409
>gi|456876876|gb|EMF91938.1| DEAD/DEAH box helicase [Leptospira santarosai str. ST188]
Length = 514
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP +GKD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVIL-KGKDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKFKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L + +LDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLDDIKIVILDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTP------------------------ADRQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNIKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|400602623|gb|EJP70225.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 545
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 209/443 (47%), Gaps = 76/443 (17%)
Query: 92 SKKRKRS----SANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTV 147
++KR+R+ S++EE+ G + DEDG KQ K + + KKKG
Sbjct: 35 ARKRRRTKDNNSSDEEEDGGVQVESDEDGQDGPKQAMKPILASFAAPSRIKKKGAATAPA 94
Query: 148 EESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIP 207
+ + + +++ + +T F A L + P L++S+ + + PT IQK C+P
Sbjct: 95 AKPAV-----EAVQTQVLAPTDPNTTFAA---LGVRPWLVQSLANMAIRRPTGIQKGCVP 146
Query: 208 AAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRA 267
+G+D IG + TGSGKT+AF +P++Q+ E+ +
Sbjct: 147 EIL-RGRDCIGGSRTGSGKTVAFAVPMLQKWAED--------------------PSAVFG 185
Query: 268 LIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE 327
+++TPTRELALQ+ + + VA +++VV I GG Q LK RP +++ TPGRL +
Sbjct: 186 VVLTPTRELALQIYEQFRAVAAPQSLKVVLITGGADMRPQAIALKQRPHIIIATPGRLAD 245
Query: 328 -LMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNC 386
+ + GE + L + F VLDEADR++ MLP + C
Sbjct: 246 HVRTSGEDTVCGLRRVRFIVLDEADRLLHAA------GPGSMLP-----------DVEEC 288
Query: 387 VTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMR-AN 445
++V +RQTL+F+AT ++ + R ++E + + G +
Sbjct: 289 LSVLP-PPTERQTLLFTAT--MTPEVR------------------ALEAMPRKPGKQPVF 327
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ-GRTIV-FCTSIAALRHIS 503
V VD + V A L + ++ K+ YL+ +L G+T++ FC A +
Sbjct: 328 VCEVDTQTLAVPAT-LSQYHLQVPVTHKEHYLHVLLLTEANVGKTVILFCNRTATADFLH 386
Query: 504 SLLKILGIDVWTLHAQMQQRARL 526
+L++L V +LH+++ QR R+
Sbjct: 387 HMLRLLDHRVTSLHSKLPQRQRI 409
>gi|448820186|ref|YP_007413348.1| ATP-dependent RNA helicase [Lactobacillus plantarum ZJ316]
gi|448273683|gb|AGE38202.1| ATP-dependent RNA helicase [Lactobacillus plantarum ZJ316]
Length = 528
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 83/361 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L L+K++ R ++E TPIQ IP +GKDVIG A+TG+GKT AF LPI+Q
Sbjct: 3 FTELGLSDSLLKAVNRAGYEEATPIQAETIPMVL-EGKDVIGQAQTGTGKTAAFALPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RL + +++AL+++PTRELA+Q + + + K +V
Sbjct: 62 RLDFDNH--------------------NIQALVVSPTRELAIQTQEEIFRLGKDERAKVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK P+V+VGTPGRL + + G V+L + VLDEAD M+
Sbjct: 102 VVYGGADIRRQIRNLKQNPQVIVGTPGRLLDHIRRG---TVKLDHVKMLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++SII +P +RQT++FSAT+ +
Sbjct: 159 GFLEDIESIIKQVP------------------------DERQTMLFSATMPPEIKRIGVQ 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K+ H +KSK+ + A+ +++ +++ KE
Sbjct: 195 FMKEPHHVKIKSKE------------------------------MTADTVDQYYVKAKEF 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQ 531
+K + + V TIVF + + +S L+ G + +H + Q+ R ++ Q
Sbjct: 225 EKFDIMTRLFDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQ 284
Query: 532 M 532
Sbjct: 285 F 285
>gi|291392610|ref|XP_002712705.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Oryctolagus cuniculus]
Length = 455
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 162/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ +L + +PT IQ IP A QG+D+IG AETGSGKT AF LPI+
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIGLAETGSGKTGAFALPILN 84
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE ++ L AL++TPTRELA Q+++ + + I V
Sbjct: 85 ALLETPQR--------------------LFALVLTPTRELAFQISEQFEALGSSIGVHCA 124
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ + Q L +P +V+ TPGRL + + + L L + V+DEADR++
Sbjct: 125 VIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNM 182
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P + R+T +FSAT+ +KL
Sbjct: 183 DFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---QKL 215
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK+ + +T+ KL++ +I + KD Y
Sbjct: 216 QRAALKNPVKCAVSSKYQTV----------------------EKLQQYYIFIPSKFKDTY 253
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ ++FC++ + + LL+ LG LH QM Q RL
Sbjct: 254 LVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 303
>gi|70725957|ref|YP_252871.1| hypothetical protein SH0956 [Staphylococcus haemolyticus JCSC1435]
gi|123660708|sp|Q4L7W0.1|Y956_STAHJ RecName: Full=Probable DEAD-box ATP-dependent RNA helicase SH0956
gi|68446681|dbj|BAE04265.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 503
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 174/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + ++++ + FKEPTPIQK IP +GKD++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGISDKTVETLEAMGFKEPTPIQKDSIPYTL-EGKDILGQAQTGTGKTGAFGIPLI- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK + ++ALI+ PTRELA+QV + L+ ++G NV+VV
Sbjct: 62 --------------------EKVVGQSGVQALILAPTRELAMQVAEQLREFSRGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+ + + L
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMPKAI---QTL 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+KS Q V +N+ +S+ +++E + KE +K
Sbjct: 193 VQQFMKSPQIVKTMNN--EMSD--------------------PQIDEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|300772766|ref|ZP_07082636.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
gi|300761069|gb|EFK57895.1| ATP-dependent RNA helicase RhlE [Sphingobacterium spiritivorum ATCC
33861]
Length = 435
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 167/349 (47%), Gaps = 68/349 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L ++K++ ++ PTPIQ+ IP Q KD++ A+TG+GKT AF +PI+Q
Sbjct: 20 FKDLKLIAPILKALDASGYQNPTPIQEQAIPII-FQRKDLLACAQTGTGKTAAFAIPILQ 78
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L +EK A+ +R L++TPTRELA+Q+ ++ +K + +R +
Sbjct: 79 MLTYSKEKTAQ---------------KRIRTLVLTPTRELAIQIKENFDAYSKELPIRNL 123
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+ + Q L+ ++++ TPGRL +L + G ++L L +FVLDEADRM++
Sbjct: 124 VIYGGVGQQPQRDALRKGIDILIATPGRLLDLYNQG---FIDLKQLEYFVLDEADRMLDM 180
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ +I ++P KKRQTL+FSAT + A+ +K
Sbjct: 181 GFIHDVKKVISIIP------------------------KKRQTLLFSAT--MPAEIQKLA 214
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
H + + + V++T A K+++S + DK
Sbjct: 215 SH-----------------------ILEDPSKVEVTPESTTAEKIQQSVYFVSKSDKRHL 251
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L ++L T+VF + I+ L GI +H Q AR
Sbjct: 252 LTHLLKSENIEHTLVFSRTKHGADRIAKDLAKQGIQAAAIHGNKSQSAR 300
>gi|171685610|ref|XP_001907746.1| hypothetical protein [Podospora anserina S mat+]
gi|170942766|emb|CAP68419.1| unnamed protein product [Podospora anserina S mat+]
Length = 798
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 160/353 (45%), Gaps = 76/353 (21%)
Query: 179 ELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRL 238
E+ L ++K + + F +PTPIQ IP A GKDV+G A TGSGKT AF +PI++RL
Sbjct: 277 EMSLSRPILKGLNSVGFTKPTPIQSKTIPIAL-MGKDVVGGAVTGSGKTGAFLVPILERL 335
Query: 239 LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV--AKGINVRVV 296
L +K A R +I+ PTRELA+Q H GV A +++
Sbjct: 336 LYRSKKVATT-----------------RVVILAPTRELAIQC--HAVGVKLASHTDIKFC 376
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
VGG+S + QE+ L+ RP+VV+ TPGR + M VE T+ VLDEADRM+E+
Sbjct: 377 LAVGGLSLKVQEQELRLRPDVVIATPGRFIDHMRNSASFAVE--TVEILVLDEADRMLED 434
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G EL I+ LP K RQT++FSAT+ S D +L
Sbjct: 435 GFADELNEILTTLP------------------------KSRQTMLFSATMTSSVD---RL 467
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK---EEDK 473
RAG+ V I + + A+ L + F+ + E+ +
Sbjct: 468 I---------------------RAGLNKPVRI-QVDSQKKTASNLRQEFVRLRPGREKKR 505
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
YL +I R I+F + +LG+ LH M Q R+
Sbjct: 506 MGYLVHICKTLYTERVIIFFRQKKIAHETRIIFGLLGMSCAELHGSMNQAQRI 558
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 159/345 (46%), Gaps = 70/345 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
++K++ + +PTPIQ A +P A GKDV+G A TGSGKT AF +PI++RLL
Sbjct: 197 IIKALTTMGLHKPTPIQAAAVPVAL-LGKDVVGGAVTGSGKTAAFTIPIIERLL------ 249
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
DKG+ A R L++ PTRELA+Q + +A +VR +VGG+S +
Sbjct: 250 ---YRDKGKNA------AATRCLVVVPTRELAVQCFEVGTRMAGHTDVRFCLVVGGLSLK 300
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
QE L++RP+V++ TPGRL + + L L VLDEADRM+E+G EL I
Sbjct: 301 SQEAALRSRPDVLIATPGRLIDHLHNSPSFT--LDALDILVLDEADRMLEDGFADELTEI 358
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ P++ RQT++FSAT+ S D KL SL
Sbjct: 359 VKACPVS------------------------RQTMLFSATMTDSVD---KLIRLSLTKPV 391
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KEEDKDAYLYYILS 482
+ VD +A L + F+ KE+++ A L I
Sbjct: 392 RI--------------------FVDAKRS--MAKGLVQEFVRVRPEKEKERPALLLCICK 429
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ R IVF S + + +L + LH + Q RLK
Sbjct: 430 RTFKTRVIVFFRSKKLAHQMRIVFGLLDMKCDELHGDLSQEQRLK 474
>gi|254555590|ref|YP_003062007.1| ATP-dependent RNA helicase [Lactobacillus plantarum JDM1]
gi|300769652|ref|ZP_07079536.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179612|ref|YP_003923740.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380031534|ref|YP_004888525.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
gi|418274186|ref|ZP_12889684.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum NC8]
gi|254044517|gb|ACT61310.1| ATP-dependent RNA helicase [Lactobacillus plantarum JDM1]
gi|300492805|gb|EFK27989.1| DEAD/DEAH box family ATP-dependent RNA helicase [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045103|gb|ADN97646.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342240777|emb|CCC78011.1| ATP-dependent RNA helicase [Lactobacillus plantarum WCFS1]
gi|376009752|gb|EHS83078.1| ATP-dependent RNA helicase [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 528
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 167/361 (46%), Gaps = 83/361 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L L+K++ R ++E TPIQ IP +GKDVIG A+TG+GKT AF LPI+Q
Sbjct: 3 FTELGLSDSLLKAVNRAGYEEATPIQAETIPMVL-EGKDVIGQAQTGTGKTAAFALPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
RL + +++AL+++PTRELA+Q + + + K +V
Sbjct: 62 RLDFDNH--------------------NIQALVVSPTRELAIQTQEEIFRLGKDERAKVQ 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK P+V+VGTPGRL + + G V+L + VLDEAD M+
Sbjct: 102 VVYGGADIRRQIRNLKQNPQVIVGTPGRLLDHIRRG---TVKLDHVKMLVLDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSAD 411
G +++SII +P +RQT++FSAT+ +
Sbjct: 159 GFLEDIESIIKQVP------------------------DERQTMLFSATMPPEIKRIGVQ 194
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
F K+ H +KSK+ + A+ +++ +++ KE
Sbjct: 195 FMKEPHHVKIKSKE------------------------------MTADTVDQYYVKAKEF 224
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQ 531
+K + + V TIVF + + +S L+ G + +H + Q+ R ++ Q
Sbjct: 225 EKFDIMTRLFDVQAPELTIVFGRTKRRVDELSKGLEARGYNAAGIHGDLSQQRRTQIMRQ 284
Query: 532 M 532
Sbjct: 285 F 285
>gi|313683287|ref|YP_004061025.1| dead/deah box helicase domain-containing protein [Sulfuricurvum
kujiense DSM 16994]
gi|313156147|gb|ADR34825.1| DEAD/DEAH box helicase domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 526
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 169/364 (46%), Gaps = 78/364 (21%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
EE + + ++T F+A+ L +M+SI FK P+PIQ+ IP +G+DV+G A
Sbjct: 5 EETITDENLAT-FEAFG---LRKEIMQSINFAGFKTPSPIQQMVIPVIM-EGRDVVGQAH 59
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TG+GKT AFGLP + ++ KG + LIITPTRELA QV+
Sbjct: 60 TGTGKTAAFGLPALNKM---------------------HLKGGIETLIITPTRELANQVS 98
Query: 282 DHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
D + K + VR V I GG S +Q L++ +V++ TPGRL +++S +++++ T
Sbjct: 99 DEIFKYGKHLGVRTVTIYGGSSYNRQMDLIERGAQVIIATPGRLLDMLS---RNMLKGFT 155
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
S +LDEAD M++ G ++ I LP +RQTL+
Sbjct: 156 PSTVILDEADEMLDMGFLDDINEIFTYLP------------------------TERQTLL 191
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT+ I+ L+ER + N +T +
Sbjct: 192 FSATMPA-----------------------PIKQLAER--ILVNPFFASITKSETTNTDI 226
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
+ + +E ++D + ++ +T+VFC + + +S++L G LH M+
Sbjct: 227 TQQYYVIEESERDDAIIRLMDSEDAKKTVVFCRTKKEVDRLSNVLSAAGYMAKGLHGDME 286
Query: 522 QRAR 525
QR R
Sbjct: 287 QRQR 290
>gi|143462274|sp|Q0CIQ3.2|RRP3_ASPTN RecName: Full=ATP-dependent rRNA helicase rrp3
Length = 445
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 177/372 (47%), Gaps = 76/372 (20%)
Query: 158 DDAEEELVNEAEISTEFDA---WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGK 214
D + EE+ + E + A + EL + L ++ L + PTPIQ+ CIP A +G+
Sbjct: 8 DSSPEEVSPDTETPSTTTAPKTFRELGVIDSLCEACEELGYTAPTPIQERCIPIAL-EGR 66
Query: 215 DVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTR 274
D+IG AETGSGKT AF LP++Q L+++ ++ +LI+ PTR
Sbjct: 67 DLIGLAETGSGKTAAFVLPMLQALMDKPQQ--------------------FHSLILAPTR 106
Query: 275 ELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEK 334
ELA Q+ ++ + I+VR ++GGM Q L +P V+V TPGRL + + +
Sbjct: 107 ELAQQIAHTVEALGARISVRCTLLIGGMDMISQAIALGKKPHVIVATPGRLLDHLENTKG 166
Query: 335 HLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQR 394
L TL + VLDEADR+++ L ++ +LP
Sbjct: 167 F--SLRTLKYLVLDEADRLLDLDFGPILDKLLRLLP------------------------ 200
Query: 395 KKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
KR+T +FSAT++ + + S++ S +R +V+ + T
Sbjct: 201 -KRKTYLFSATMS--------------------SKVESLQRASLSDPVRVSVSTKNQT-- 237
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
A+KL +S++ + KD YL Y+L+ I+F ++ + +S +L+ LG
Sbjct: 238 ---ASKLLQSYLFIPHKFKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRNLGFPAI 294
Query: 515 TLHAQMQQRARL 526
+H Q+ Q ARL
Sbjct: 295 PIHGQLSQSARL 306
>gi|357152629|ref|XP_003576183.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 2
[Brachypodium distachyon]
Length = 770
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 170/358 (47%), Gaps = 70/358 (19%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S + +++ EL + L+++ L +++PTPIQ ACIP A G+D+ G+A TGSGKT AF
Sbjct: 161 SFKANSFLELNISRPLLRACEALGYQKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAF 219
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVA 288
LP+++RLL + PK +R LI+TPTRELA QV ++ +A
Sbjct: 220 SLPVLERLL-------------------FRPKRVPAIRVLILTPTRELAAQVHSMIEKLA 260
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
+ ++R IVGG+ T+ QE L++ P++VV TPGR+ + + V L L+ +LD
Sbjct: 261 QFTDIRCCLIVGGLPTKVQEVALRSNPDIVVATPGRIIDHLRNSLS--VGLEDLAILILD 318
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++E G E+ +I M P K+RQT++FSAT+
Sbjct: 319 EADRLLELGFSVEINELIRMCP------------------------KRRQTMLFSATMTE 354
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
D KL ++ L TL+E +V +
Sbjct: 355 EIDELVKLSLNKPVRLEADPSLKRPATLTEE--------VVRIRR--------------S 392
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+E +++A L + + R I+F + + + + + G+ LH + Q RL
Sbjct: 393 REANQEAVLLALCLKTFKERVIIFSGTKHSAHRLKIMFGLSGMKAAELHGNLTQAQRL 450
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 150/350 (42%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L + P L +S L FK PTPIQ IP+A QG+DVIG A+TGSGKT AF LPI+Q
Sbjct: 48 FASLGIIPELCQSCATLAFKAPTPIQVEAIPSAL-QGRDVIGLAQTGSGKTAAFSLPILQ 106
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E + ALI+ PTRELA Q++ + + + VR
Sbjct: 107 KLWENPQP--------------------FFALILAPTRELAYQISQQVTSLGSPLGVRTA 146
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGGM Q L RP V+V TPGRL + + + L + F V+DEADR+++
Sbjct: 147 VIVGGMDMMSQSIALSKRPHVIVATPGRLMDHLENTKGF--SLKNVKFLVMDEADRLLDM 204
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
+ I+ ++P K+R T +FSAT+ KL
Sbjct: 205 DFGPIIDKILKVIP------------------------KERNTYLFSATMTTKV---AKL 237
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL V T+S + KD +
Sbjct: 238 QRASLNKPVRVEVATKYSTVSTLLQHYL----------------------LLPLKAKDTH 275
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YI++ I+F ++ + +S +L+ LG LH QM Q RL
Sbjct: 276 LLYIVTELSSCSMIIFTRTVVDAQRLSIMLRRLGFPAIPLHGQMSQSLRL 325
>gi|367044830|ref|XP_003652795.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
gi|347000057|gb|AEO66459.1| hypothetical protein THITE_2114564 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 71/335 (21%)
Query: 192 RLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLED 251
RL +K PTPIQ+ IP A QG+D+IG AETGSGKT AF LPI+Q LL++ +
Sbjct: 79 RLGYKRPTPIQEQSIPLAL-QGRDIIGIAETGSGKTAAFALPILQALLDKPQP------- 130
Query: 252 KGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLL 311
L AL++ PTRELA Q+T + + I++R I+GG+ +Q L
Sbjct: 131 -------------LFALVLAPTRELAAQITQAFEALGSLISLRCALILGGLDMVQQAIAL 177
Query: 312 KARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPM 371
+P VVV TPGRL + + + L L + V+DEADR+++ L+ I+ LP
Sbjct: 178 GKKPHVVVATPGRLLDHLEKTKGF--SLRNLKYLVMDEADRLLDMDFGPILEKILKFLP- 234
Query: 372 TNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLN 431
++R+T +FSAT++ +
Sbjct: 235 -----------------------RERRTFLFSATMS-----------------------S 248
Query: 432 SIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIV 491
+E+L +RA +R + + ++ L ++++ KD YL Y+ + I+
Sbjct: 249 KVESL-QRASLRDPLKVSISSSKYQTVATLVQNYLFIPHMHKDTYLIYLCNEFAGQTIII 307
Query: 492 FCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
F ++ + I+ LL+ LG+ LH + Q ARL
Sbjct: 308 FTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARL 342
>gi|296210930|ref|XP_002752172.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 1
[Callithrix jacchus]
Length = 455
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + +L ++ +L + +PT IQ IP A QG+D+IG AETGSGKT AF LPI+
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIGLAETGSGKTGAFALPILN 84
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
LLE ++ L AL++TPTRELA Q+++ + + I V+
Sbjct: 85 ALLETPQR--------------------LFALVLTPTRELAFQISEQFEALGSSIGVQSA 124
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG+ + Q L +P +++ TPGRL + + + L L + V+DEADR++
Sbjct: 125 VIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGF--NLRALKYLVMDEADRILNM 182
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ I+ ++P + R+T +FSAT+ +KL
Sbjct: 183 DFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV---QKL 215
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ +LK+ + +T+ KL++ +I + KD Y
Sbjct: 216 QRAALKNPVKCAVSSKYQTV----------------------EKLQQYYIFIPSKFKDTY 253
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ ++FC++ + + LL+ LG LH QM Q RL
Sbjct: 254 LVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 303
>gi|289550302|ref|YP_003471206.1| cold-shock DEAD-box protein A [Staphylococcus lugdunensis HKU09-01]
gi|315660238|ref|ZP_07913093.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|385783930|ref|YP_005760103.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|418415253|ref|ZP_12988459.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635602|ref|ZP_13197976.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|289179834|gb|ADC87079.1| Cold-shock DEAD-box protein A [Staphylococcus lugdunensis HKU09-01]
gi|315494665|gb|EFU83005.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|339894186|emb|CCB53451.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|374841707|gb|EHS05164.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|410875260|gb|EKS23185.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 504
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L + ++++ + FKEPTPIQK IP A +G+D++G A+TG+GKT AFG+P++
Sbjct: 4 FKDLGISEKTVQTLENMGFKEPTPIQKDSIPYAL-EGRDILGQAQTGTGKTGAFGIPLI- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK K +++LI+ PTRELA+QV + L+ ++G NV+VV
Sbjct: 62 --------------------EKVVNKSGVQSLILAPTRELAMQVAEQLREFSRGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNGIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+ + + L
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMPKAI---QAL 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K+ Q V +N+ +S+ +++E + KE +K
Sbjct: 193 VQQFMKTPQIVKTMNN--EMSD--------------------PQIDEYYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|114052016|ref|NP_001039850.1| probable ATP-dependent RNA helicase DDX47 [Bos taurus]
gi|109825481|sp|Q29S22.1|DDX47_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX47; AltName:
Full=DEAD box protein 47
gi|88758683|gb|AAI13208.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Bos taurus]
gi|296487253|tpg|DAA29366.1| TPA: probable ATP-dependent RNA helicase DDX47 [Bos taurus]
Length = 457
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 164/354 (46%), Gaps = 72/354 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + +L + +L ++ +L + +PT IQ IP A QG+D+IG AETGSGKT AF L
Sbjct: 24 ETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIGLAETGSGKTGAFAL 82
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+ LLE ++ L AL++TPTRELA Q+++ + + I
Sbjct: 83 PILNALLETPQR--------------------LFALVLTPTRELAFQISEQFEALGSSIG 122
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
V+ IVGG+ + Q L +P +V+ TPGRL + + + L L + V+DEADR
Sbjct: 123 VQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGF--NLRALKYLVMDEADR 180
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ E+ I+ ++P + R+T +FSAT+
Sbjct: 181 ILNMDFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV-- 214
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+KL+ +LK+ + +T+ KL++ ++ +
Sbjct: 215 -QKLQRAALKNPVKCAVSSKYQTV----------------------EKLQQYYLFIPSKF 251
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
KD YL YIL+ ++FC++ + + LL+ LG LH QM Q RL
Sbjct: 252 KDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 305
>gi|440910729|gb|ELR60491.1| Putative ATP-dependent RNA helicase DDX47 [Bos grunniens mutus]
Length = 457
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 164/354 (46%), Gaps = 72/354 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + +L + +L ++ +L + +PT IQ IP A QG+D+IG AETGSGKT AF L
Sbjct: 24 ETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIGLAETGSGKTGAFAL 82
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+ LLE ++ L AL++TPTRELA Q+++ + + I
Sbjct: 83 PILNALLETPQR--------------------LFALVLTPTRELAFQISEQFEALGSSIG 122
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
V+ IVGG+ + Q L +P +V+ TPGRL + + + L L + V+DEADR
Sbjct: 123 VQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGF--NLRALKYLVMDEADR 180
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ E+ I+ ++P + R+T +FSAT+
Sbjct: 181 ILNMDFETEVDKILKVIP------------------------RDRKTFLFSATMTKKV-- 214
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+KL+ +LK+ + +T+ KL++ ++ +
Sbjct: 215 -QKLQRAALKNPVKCAVSSKYQTV----------------------EKLQQYYLFIPSKF 251
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
KD YL YIL+ ++FC++ + + LL+ LG LH QM Q RL
Sbjct: 252 KDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 305
>gi|357152627|ref|XP_003576182.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform 1
[Brachypodium distachyon]
Length = 780
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 170/358 (47%), Gaps = 70/358 (19%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
S + +++ EL + L+++ L +++PTPIQ ACIP A G+D+ G+A TGSGKT AF
Sbjct: 171 SFKANSFLELNISRPLLRACEALGYQKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAF 229
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVA 288
LP+++RLL + PK +R LI+TPTRELA QV ++ +A
Sbjct: 230 SLPVLERLL-------------------FRPKRVPAIRVLILTPTRELAAQVHSMIEKLA 270
Query: 289 KGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLD 348
+ ++R IVGG+ T+ QE L++ P++VV TPGR+ + + V L L+ +LD
Sbjct: 271 QFTDIRCCLIVGGLPTKVQEVALRSNPDIVVATPGRIIDHLRNSLS--VGLEDLAILILD 328
Query: 349 EADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
EADR++E G E+ +I M P K+RQT++FSAT+
Sbjct: 329 EADRLLELGFSVEINELIRMCP------------------------KRRQTMLFSATMTE 364
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
D KL ++ L TL+E +V +
Sbjct: 365 EIDELVKLSLNKPVRLEADPSLKRPATLTEE--------VVRIRR--------------S 402
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+E +++A L + + R I+F + + + + + G+ LH + Q RL
Sbjct: 403 REANQEAVLLALCLKTFKERVIIFSGTKHSAHRLKIMFGLSGMKAAELHGNLTQAQRL 460
>gi|260223394|emb|CBA33917.1| Putative ATP-dependent RNA helicase rhlE [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 520
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
NE T A+ +L+L L +++ + + TPIQ IP GKDV+GAA+TG+G
Sbjct: 13 NELTADTPTMAFAQLQLADPLARAVAEMGYTTMTPIQAQAIPVVL-TGKDVMGAAQTGTG 71
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
KT AF LP++QRL+ K E A + +RAL++ PTRELA QV +K
Sbjct: 72 KTAAFALPLLQRLM------------KHENASTSPARHPVRALVLLPTRELADQVAQQVK 119
Query: 286 GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
AK N+R + GGM + Q LKA EV+V TPGRL + + K+ V L+ + +
Sbjct: 120 LYAKYTNLRSAVVFGGMDMKPQTLELKAGVEVLVATPGRLLDHIEA--KNAV-LNQVEYV 176
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSAT 405
VLDEADRM++ G +LQ I+ LP K R TL+FSAT
Sbjct: 177 VLDEADRMLDIGFLPDLQRILSYLP------------------------KTRTTLLFSAT 212
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
+ K+L + L+ N +++ A+ +E+ F
Sbjct: 213 FSPEI---KRLANSYLQ----------------------NPITIEVARSNATASTVEQHF 247
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++DK L I+ + VF S ++ L+ G+ LH Q R
Sbjct: 248 YRVNDDDKRHALLQIVRSKDIKQAFVFVNSKLGCARLTRALERDGLRAAALHGDKSQDER 307
Query: 526 LK 527
LK
Sbjct: 308 LK 309
>gi|115454875|ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase, putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710690|gb|ABF98485.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113549509|dbj|BAF12952.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 736
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 171/349 (48%), Gaps = 48/349 (13%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W+E +L L++++ + +KEP+PIQ A IP Q +DVIG AETGSGKT AF LP++
Sbjct: 317 WSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQ-RDVIGIAETGSGKTAAFVLPMLS 375
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+ L EE E P A+++ PTRELA Q+ + A + ++VV
Sbjct: 376 YITR--------LPPISEENEAEGPY----AVVMAPTRELAQQIEEETVKFATYLGIKVV 423
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
IVGG S E+Q ++ EVV+ TPGRL + + E+ L+ ++ VLDEADRMI+
Sbjct: 424 SIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCL---ERRYAVLNQCNYVVLDEADRMIDM 480
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++ ++D +P +N + + E+ + T+ R T +FSAT+
Sbjct: 481 GFEPQVVGVLDAMPSSNLKPENEDEEL-DAKTIY------RTTYMFSATMP--------- 524
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
++E L+ R +R N +V + + + ++ I KE +K +
Sbjct: 525 --------------PAVERLA-RKYLR-NPVVVTIGTAGKATDLITQNVIMTKESEKMSR 568
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L IL+ G IVFC + + + L G V TLH Q R
Sbjct: 569 LQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQR 617
>gi|195147728|ref|XP_002014827.1| GL19380 [Drosophila persimilis]
gi|194106780|gb|EDW28823.1| GL19380 [Drosophila persimilis]
Length = 437
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 176/357 (49%), Gaps = 41/357 (11%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I +WNE P ++ I ++ +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 4 IPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 62
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + + + LED + A+I+ PTRELA Q+ + +
Sbjct: 63 FLIPLLSWI--QSLPKIERLEDVDQGP---------YAIIMAPTRELAQQIEEETIKFGQ 111
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ E + L+ ++ VLDE
Sbjct: 112 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVLDE 168
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK-RQTLVFSATIAL 408
ADRMI+ G ++Q I++ +P+TN + + +N + + +KK RQT++F+AT+
Sbjct: 169 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDENKLMENFYTKKKYRQTVMFTATMPP 228
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + +L L+ +V + S+ +ER E+
Sbjct: 229 AVE---RLARSYLRRPSTVY-IGSMGKPTERT---------------------EQIVYMM 263
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E DK L ILS I+F ++ L+ LG + TLH Q R
Sbjct: 264 GENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 320
>gi|307729080|ref|YP_003906304.1| DEAD/DEAH box helicase [Burkholderia sp. CCGE1003]
gi|307583615|gb|ADN57013.1| DEAD/DEAH box helicase domain protein [Burkholderia sp. CCGE1003]
Length = 487
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 67/352 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ L P ++K++ + PTPIQ IP G+DV+GAA+TG+GKT +F LPI+Q
Sbjct: 13 FDQFGLAPDILKAVKESGYTTPTPIQAQAIPVVL-AGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHLKGVAKGINVRV 295
RLL + +A +P H +RALI+TPTRELA QV +++ AK +R
Sbjct: 72 RLLPQASTSA-------------SPARHPVRALILTPTRELADQVAANVQAYAKHTALRS 118
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG+ Q L+ E+++ TPGRL + + ++ L + VLDEADRM++
Sbjct: 119 AVVFGGVDMNPQSEQLRRGVEILIATPGRLLDHV---QQKTANLGQVQILVLDEADRMLD 175
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +LQ I+++LP K+RQTL+FSAT S + KK
Sbjct: 176 MGFLPDLQRILNLLP------------------------KERQTLLFSAT--FSGEI-KK 208
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L L++ Q++ R+N ++T + E E DK
Sbjct: 209 LAATYLRNPQTIE------------VARSNSTATNVTQIV----------YEVAEGDKTG 246
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ ++ + IVFC S ++ L+ G+ +H Q R++
Sbjct: 247 AVVQLIRERSLKQVIVFCNSKIGASRLARSLERDGVVATAIHGDRSQNERMQ 298
>gi|154282923|ref|XP_001542257.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
gi|150410437|gb|EDN05825.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
Length = 1466
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 152/345 (44%), Gaps = 72/345 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
+++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI++RLL K
Sbjct: 316 ILRGLTSVGFTTPTPIQRKTIPVAL-LGKDVVGGAVTGSGKTGAFIIPILERLLYRPRKV 374
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
R I+ PTRELA+Q + +A ++ +VGG S
Sbjct: 375 PTS-----------------RVAILMPTRELAVQCYNVATKLATFTDITFCQLVGGFSLR 417
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
+QE +LK RP+V++ TPGR + M V+ TL VLDEADRM+E+G EL I
Sbjct: 418 EQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRMLEDGFADELNEI 475
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +P K RQT++FSAT+
Sbjct: 476 LTTIP------------------------KSRQTMLFSATMT------------------ 493
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC---KEEDKDAYLYYILS 482
N+++ L R +VD V L + F+ +EE + YL +
Sbjct: 494 -----NNVDKLIRVGLSRPVRLMVDAKKQTV--GTLIQEFVRLRPGREEKRLGYLIVLCK 546
Query: 483 VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+ R IVF S + + +LG+ V LH M Q R+K
Sbjct: 547 NIYKDRVIVFFRSKKEAHRVRIIFGLLGLKVTELHGSMSQEQRIK 591
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 172/373 (46%), Gaps = 74/373 (19%)
Query: 156 GPDDAEEELVNEAEISTEFD--AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQG 213
P D E++ A I+ + ++ +L + P ++++ + FK PTPIQ IP A Q
Sbjct: 100 APADEEQDEKKVATIAEDGKKVSFQDLGVIPQIVEACTNMGFKHPTPIQVKAIPEAL-QA 158
Query: 214 KDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPT 273
+DVIG A+TGSGKT AF +PI+Q L + PK A ++ PT
Sbjct: 159 RDVIGLAQTGSGKTAAFTIPILQALWDN-------------------PKPFF-ACVLAPT 198
Query: 274 RELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGE 333
RELA Q++ ++ + I VR IVGGM Q L RP V+V TPGRL + + +
Sbjct: 199 RELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDHLENTK 258
Query: 334 KHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQ 393
L L + V+DEADR+++ + IID L + S+
Sbjct: 259 G--FSLRGLQYLVMDEADRLLD----MDFGPIIDKL-------------------LQSIP 293
Query: 394 RKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTN 453
R++R T++FSAT+ KL+ SLK N V++
Sbjct: 294 RERR-TMLFSATMTTKV---AKLQRASLK----------------------NPVRVEVDT 327
Query: 454 MCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDV 513
+ L++ ++ KD YL ++ + IVF ++ + +S LL++LG
Sbjct: 328 KYTTVSTLKQHYLFMPFAHKDTYLVHLANEQAGHSIIVFTRTVHDSQRLSILLRLLGFPA 387
Query: 514 WTLHAQMQQRARL 526
LH Q+ Q+ARL
Sbjct: 388 IPLHGQLSQQARL 400
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 166/356 (46%), Gaps = 70/356 (19%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ +L + L+K++ L +K PTPIQ ACIP A G+D+ G+A TGSGKT AF LP +
Sbjct: 150 SFADLNISRPLLKAVEALGYKSPTPIQAACIPLAL-AGRDICGSAVTGSGKTAAFALPFL 208
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL + P+G L++TPTRELA+Q+ ++ +A+ ++
Sbjct: 209 ERLL-------------------HRPRGLAATYVLVLTPTRELAVQIHSMIEKLAQFTDI 249
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
V IVGG+S + Q L+ PEVVV TPGRL + + + V L L+ VLDEADR+
Sbjct: 250 NVALIVGGLSLQVQAITLRQSPEVVVATPGRLIDHLRNSQS--VGLEDLAVLVLDEADRL 307
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E G E+ ++ P +KRQT++FSAT F
Sbjct: 308 LEMGFREEVAEVVRAAP------------------------RKRQTMLFSAT------FN 337
Query: 414 KKLKH-GSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
+++ +L KQ V + + + IV L A K C
Sbjct: 338 DQVRDLVALSLKQPVRLAADAARAAPKLLTQ---EIVRLKGPAAAATKEAVCLALCARSF 394
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGI-DVWTLHAQMQQRARLK 527
D +GRTIVFC++ + L + G+ LH M Q ARL+
Sbjct: 395 GD-----------RGRTIVFCSTKTKAHRLKILFGLAGLPPAAELHGNMSQTARLE 439
>gi|258516257|ref|YP_003192479.1| DEAD/DEAH box helicase [Desulfotomaculum acetoxidans DSM 771]
gi|257779962|gb|ACV63856.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 539
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 172/357 (48%), Gaps = 74/357 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L+ +++++ + F+EPTPIQ+ IP + +GKD+IG A+TG+GKT AF +P+++
Sbjct: 14 FGELTLNSRIVQALVNMGFEEPTPIQQKTIPISL-EGKDIIGQAQTGTGKTAAFAIPVLE 72
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ R ++ALIITPTRELA+QV + + + K +R +
Sbjct: 73 KIDSRR--------------------NGVQALIITPTRELAIQVAEEISNIGKYCRIRAL 112
Query: 297 PIVGGMSTEKQERLLK-ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
PI GG S ++Q + LK R ++V+GTPGRL + + G L ++ T+ VLDEAD M++
Sbjct: 113 PIYGGQSIDRQIKALKQQRVQIVIGTPGRLLDHLRRGTLRLEQVATV---VLDEADEMLD 169
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G ++++I++ P T RQT +FSATI R
Sbjct: 170 MGFIEDIEAILNQTPTT------------------------RQTFLFSATIP-EEILRLS 204
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
K+ LNS E ++ V N+ V +E+ + E +E K
Sbjct: 205 RKY-----------LNSPEFIT-----------VSRNNLTV--PLIEQVYYETRESTKLD 240
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L I+FC + + + + L++ G LH + Q R + Q
Sbjct: 241 ALARLLDALDISLAIIFCRTKRGVDELVASLQVRGYQAAGLHGDLSQYQRNHVMRQF 297
>gi|384154754|ref|YP_005537569.1| DEAD/DEAH box helicase [Arcobacter butzleri ED-1]
gi|345468308|dbj|BAK69759.1| DEAD-box ATP dependent DNA helicase [Arcobacter butzleri ED-1]
Length = 516
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 76/350 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+N+ LL K+I FKEP+PIQ+ IP G+D++G A TG+GKT AFGLPI+
Sbjct: 2 TFNDFNFKELLQKAIDEAGFKEPSPIQEQAIPYIL-DGRDIVGQAHTGTGKTAAFGLPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ K + A++I PTRELA+QV+D L K + +
Sbjct: 61 NKI---------------------KAKSGVEAVVIVPTRELAMQVSDELYRFGKFLGINT 99
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG + +Q +L++ V+V TPGR +L+ G + + F +LDEAD M++
Sbjct: 100 ATVYGGQAYARQIKLIE-NSSVIVATPGRFLDLLRGDKISIKP----KFVILDEADEMLD 154
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I LP + RQTL+FSAT+ + K
Sbjct: 155 MGFLDDIKEIFTFLP------------------------ENRQTLLFSATMPTAI---KN 187
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L LK + V LT V +K+ ++F E+++D
Sbjct: 188 LAKTILKEPE----------------------FVTLTKSDVTNSKITQTFYVVDEKERDD 225
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L + ++I+FC + + +S+ L G LH M+Q+ R
Sbjct: 226 ALIRLFDFKNPKKSIIFCRTKKDVDRLSTFLVSQGFMAKALHGDMEQKQR 275
>gi|398406547|ref|XP_003854739.1| RNA-dependent ATPase [Zymoseptoria tritici IPO323]
gi|339474623|gb|EGP89715.1| hypothetical protein MYCGRDRAFT_84402 [Zymoseptoria tritici IPO323]
Length = 446
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 171/371 (46%), Gaps = 72/371 (19%)
Query: 156 GPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
G +D ++ +V + ST+ + +L + L ++ L F +PT IQ+ IP A +GKD
Sbjct: 18 GEEDIDDGIVAADDESTD-KTFADLGVVDSLCEACTALGFTKPTAIQREAIPIAL-EGKD 75
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRE 275
+IG AETGSGKT AF LPI+Q LL++ + + L++ PTRE
Sbjct: 76 IIGLAETGSGKTAAFALPILQELLDKPQP--------------------MFGLVLAPTRE 115
Query: 276 LALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
LA Q++ + + I+VR IVGGM Q L +P +VV TPGRL + + +
Sbjct: 116 LAYQISQQFEALGSLISVRCAVIVGGMDMVPQAIALAKKPHIVVATPGRLLDHLENTKGF 175
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L L + V+DEADR+++ L I +LP +
Sbjct: 176 --SLRQLKYLVMDEADRLLDLDFGPILDKIFQVLP------------------------R 209
Query: 396 KRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMC 455
+R+T++FSAT++ LN++ RA ++ V + ++
Sbjct: 210 ERRTMLFSATMS--------------------TKLNNL----TRAALQQPVKVSISSSSY 245
Query: 456 VLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWT 515
L + +I + KD YL Y+L+ IVF +I I+ LL+ LG
Sbjct: 246 QTVKNLMQRYIFIPHKFKDIYLVYLLNEFAGQTCIVFTRTINETARIAFLLRALGRSAIP 305
Query: 516 LHAQMQQRARL 526
LH QM Q ARL
Sbjct: 306 LHGQMNQSARL 316
>gi|218186850|gb|EEC69277.1| hypothetical protein OsI_38328 [Oryza sativa Indica Group]
Length = 802
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 130/234 (55%), Gaps = 48/234 (20%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ EL L L+++ L +++PTPIQ ACIP A G+D+ G+A TGSGKT AF LP+
Sbjct: 194 NSFLELNLSRPLLRACEALGYQKPTPIQAACIPLAL-TGRDICGSAITGSGKTAAFSLPV 252
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGIN 292
++RLL + PK +R LI+TPTRELA V ++ +A+ +
Sbjct: 253 LERLL-------------------FRPKRVPAIRVLILTPTRELAAPVHSMIEKLAQFTD 293
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGG+ST+ QE L++ P++VV TPGR+ + + V L L+ +LDEADR
Sbjct: 294 IRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLS--VGLEDLAILILDEADR 351
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
++E G E+Q +I M P ++RQT++FSAT+
Sbjct: 352 LLELGFSAEIQELIRMCP------------------------RRRQTMLFSATM 381
>gi|66814184|ref|XP_641271.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
gi|74897202|sp|Q54VT4.1|DDX47_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx47; AltName:
Full=DEAD box protein 47
gi|60469306|gb|EAL67300.1| hypothetical protein DDB_G0280147 [Dictyostelium discoideum AX4]
Length = 546
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 163/350 (46%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L +HP ++ + +L F +P IQ+ IP A +G+D+IG A+TGSGKT AF +P++Q
Sbjct: 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWAL-KGRDIIGLAQTGSGKTAAFVIPVLQ 179
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+LLE AP+G L L + PTRELA Q+ D + I V+
Sbjct: 180 KLLE-------------------APQG-LFCLALAPTRELAYQIADQFNAIGSTIGVKTC 219
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+VGG+ + Q L +P VVVG+PGR+ + + L ++ +F++DEADR+
Sbjct: 220 VLVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGF--NLRSIKYFIMDEADRLFSA 277
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
E+ +I+ ++P K+R T +FSAT+ KL
Sbjct: 278 DFEEEVNNILKVIP------------------------KERNTYLFSATMTSKV---AKL 310
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ SL + V + +T+ + L + ++ + KD Y
Sbjct: 311 QRASLVNPVKVQVASKYQTV----------------------DTLLQQYLFVPFKYKDCY 348
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L YIL+ TI+F ++ A+ I+ +L+ LG ++ M Q RL
Sbjct: 349 LAYILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRL 398
>gi|356565647|ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Glycine max]
gi|356565649|ref|XP_003551051.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Glycine max]
Length = 706
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 173/360 (48%), Gaps = 52/360 (14%)
Query: 168 AEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKT 227
++I +WNE +L L+K++ + +K P+PIQ A IP Q +DVIG AETGSGKT
Sbjct: 279 SKIPRPMRSWNESKLTNELLKAVEKAGYKTPSPIQMAAIPLGLQQ-RDVIGIAETGSGKT 337
Query: 228 LAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGV 287
AF LP++ + L E+ E P A+++ PTRELA Q+ D
Sbjct: 338 AAFVLPMLSYITR--------LPPISEDNEAEGPY----AVVMAPTRELAQQIEDETVKF 385
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A+ + ++VV IVGG S E+Q ++ E+V+ TPGRL + + E+ L+ ++ VL
Sbjct: 386 AQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCL---ERRYAVLNQCNYVVL 442
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKK--RQTLVFSAT 405
DEADRMI+ G ++ ++D +P +N + + E+ L KK R T +FSAT
Sbjct: 443 DEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEE---------LDEKKIYRTTYMFSAT 493
Query: 406 IALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESF 465
+ ++E L+ R +R N +V + + + +
Sbjct: 494 MP-----------------------PAVERLA-RKYLR-NPVVVTIGTAGKATDLISQHV 528
Query: 466 IECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
I KE +K + L+ +L IVF + H++ L G V TLH Q R
Sbjct: 529 IMMKEAEKFSKLHRLLDELNDKTAIVFVNTKKNADHVAKNLDKDGYRVTTLHGGKSQEQR 588
>gi|156391217|ref|XP_001635665.1| predicted protein [Nematostella vectensis]
gi|156222761|gb|EDO43602.1| predicted protein [Nematostella vectensis]
Length = 777
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 40/349 (11%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
W E ++ +++ + +L +K+PTPIQ+ IP Q +D+IG AETGSGKT AF +P++
Sbjct: 352 WKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAAFAIPLLV 410
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ K+ D + YA LI+ PTRELA Q+ + + + + +R V
Sbjct: 411 WIM----GLPKIERDNDADQGPYA-------LILAPTRELAQQIEEEILKFGRPLGIRTV 459
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
++GG+S E Q L+ E+V+ TPGRL +++ ++LV L+ S+ V+DEADRMI+
Sbjct: 460 SVIGGLSREDQGFQLRLGVEIVIATPGRLIDVLEN--RYLV-LNRCSYIVMDEADRMIDM 516
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G E+Q I++ LP++N + + + + K RQT++F+AT+
Sbjct: 517 GFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMP--------- 567
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+E L++ R A+V + ++ ++E+ E+ K
Sbjct: 568 --------------PQVERLAKNYLRRP--AVVYIGSVGKPVERVEQRVYLVNEQQKRKK 611
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L +L+ + I+F ++ L+ +G TLH Q R
Sbjct: 612 LLELLNKDLEPPIIIFVNQKKGADVLAKSLEKMGFRATTLHGGRNQEQR 660
>gi|398348356|ref|ZP_10533059.1| DEAD/DEAH box helicase [Leptospira broomii str. 5399]
Length = 556
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 169/353 (47%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L P L KSI + F E TPIQ+ IP +GKD+ G A+TG+GKT+AF +PI+
Sbjct: 3 FEELNLEPNLQKSIEKAGFVELTPIQEKAIPHGI-EGKDITGLAQTGTGKTVAFLVPIIH 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L + K + LI+ PTREL +Q+++ + + K + RVV
Sbjct: 62 NILTKGIKG-------------------VSTLILAPTRELVIQISEEAEKLLKYTDYRVV 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI+GG + Q R L+A ++V TPGRL +L GG +L + FFVLDEADRM++
Sbjct: 103 PIIGGTDYKSQNRDLQALNGIIVATPGRLIDLARGG---TADLDKVEFFVLDEADRMLDM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ ++ C + ++QTL+FSAT+++ +L
Sbjct: 160 GFINDIRWLL-----------------HKC-------KNRKQTLLFSATLSVEV---MRL 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ + + +N + ++ER +++ + E+K Y
Sbjct: 193 AYRFMNDPVEIQ-INPDKLITER---------------------IDQKLVHLGREEKLPY 230
Query: 477 LY-YILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKL 528
+ IL G+ I+F A + I L+ GI V + + + Q+ RL+L
Sbjct: 231 MVNAILDAEVDGQGIIFTNFKANIPRIVQTLRRYGIPVTGISSDLDQKKRLRL 283
>gi|301765212|ref|XP_002918022.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform 1
[Ailuropoda melanoleuca]
Length = 455
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 170/368 (46%), Gaps = 76/368 (20%)
Query: 159 DAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
+A + V E E T + +L + +L ++ +L + +PT IQ IP A QG+D+IG
Sbjct: 12 EAPQPAVQEEETKT----FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL-QGRDIIG 66
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
AETGSGKT AF LPI+ LLE ++ L AL++TPTRELA
Sbjct: 67 LAETGSGKTGAFALPILNALLETPQR--------------------LFALVLTPTRELAF 106
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+++ + + I V+ IVGG+ + Q L +P +++ TPGRL + + +
Sbjct: 107 QISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGF--N 164
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
L L + V+DEADR++ E+ I+ ++P + R+
Sbjct: 165 LRALKYLVMDEADRILNMDFETEVDKILKVIP------------------------RDRK 200
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 201 TFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV---------------------- 235
Query: 459 NKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHA 518
KL++ ++ + KD YL YIL+ ++FC++ + + LL+ LG LH
Sbjct: 236 EKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHG 295
Query: 519 QMQQRARL 526
QM Q RL
Sbjct: 296 QMSQSKRL 303
>gi|402219014|gb|EJT99089.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 658
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 172/367 (46%), Gaps = 84/367 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++L +HP L++ + L+F +PTPIQ AC A +G+DVIG AETGSGKTLAFG+P +Q
Sbjct: 232 FSQLPVHPTLLEHLLSLKFSQPTPIQ-ACAWPALLEGRDVIGIAETGSGKTLAFGVPALQ 290
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+ G+ ++ K ++ L++ PTRELALQ D L ++ + V
Sbjct: 291 SLVSN--------TPAGKPSKS---KPSIKVLVVAPTRELALQTHDTLSSLSAPFKLLSV 339
Query: 297 PIVGGMSTEKQERLLKARP--EVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
P+ GG+ Q + L A+P VVVGTPGR+ + GE ++L + + VLDEADRM+
Sbjct: 340 PLYGGVPKPPQLQAL-AQPGAAVVVGTPGRVLDFARTGE---LDLSGVGYLVLDEADRML 395
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LS 409
+ G +++ I+ + +R+ RQT +FSAT L+
Sbjct: 396 DRGFEPDIREIVGL-----------------------TKREGRQTAMFSATWPESVRRLA 432
Query: 410 ADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
A F +R R V DL+ +A +E +
Sbjct: 433 ASF-------------------------QRDPFRITVGAEDLSANKRVAQSVE---VLSS 464
Query: 470 EEDKDAYLYYIL-----SVHG-----QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQ 519
DKDA L +L S G Q RT++F + L +G V +H
Sbjct: 465 SYDKDARLRSLLQSLNHSRQGGKKAEQERTLIFVLYKKEATRVEQSLSRMGYHVAAIHGD 524
Query: 520 MQQRARL 526
M Q+AR+
Sbjct: 525 MGQQARI 531
>gi|223992625|ref|XP_002285996.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977311|gb|EED95637.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 495
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 172/359 (47%), Gaps = 50/359 (13%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
D++++L L L++ + + F PTPIQ + +P A G+DV +A TGSGKT AF LP
Sbjct: 1 IDSFSQLGLSRPLLRGVASMGFVTPTPIQASVLPVA-MAGRDVCASAVTGSGKTAAFLLP 59
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
+M+R+L+ M + K + RAL++TPTRELA Q + +AK ++
Sbjct: 60 VMERILQRGGGRTTMGGLNAK--RKASALAATRALVLTPTRELAAQCVSMMTAMAKFTDL 117
Query: 294 RVVPIVGGM-STEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
R IVGG + Q L++RP+VVV TPGRL + ++ + V+L L F +LDEADR
Sbjct: 118 RAALIVGGAKNVMSQAAELRSRPDVVVATPGRLLDHITNSQG--VDLDDLEFLILDEADR 175
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ G E+ I+ P +RQTL+FSAT++ D
Sbjct: 176 LLDLGFQDEVHEIVKACP------------------------TERQTLLFSATMSTKVDD 211
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE-- 470
KL SLK V + + G+ +A +LE+ F+ +
Sbjct: 212 LIKL---SLKQPVRVQATEKGKKDNAPTGVE-------------VAPRLEQEFVRIRAGN 255
Query: 471 --EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
+++ L +L+ R IVF + +A + + + GI LH + Q RL+
Sbjct: 256 EGVNREGMLLALLTRTFTSRVIVFFDTKSAAHRLMIVCGLCGIKCTELHGNLTQVQRLE 314
>gi|170046412|ref|XP_001850760.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167869183|gb|EDS32566.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 438
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 156/334 (46%), Gaps = 72/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L++K P+ IQ+ IP A QGKDVIG AETGSGKT AF LPI+Q LLE
Sbjct: 14 LKWKAPSKIQREAIPLAL-QGKDVIGLAETGSGKTGAFALPILQALLEN----------- 61
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P+ + A+I+TPTRELA Q+++ + + I V+ IVGGM Q L
Sbjct: 62 --------PQRYF-AVILTPTRELAYQISEQFEALGASIGVKCCVIVGGMDMVSQALQLA 112
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P +++ TPGRL + + + L + + V+DEADR++ EL I+ +LP
Sbjct: 113 RKPHIIIATPGRLVDHLENTKGF--NLKAVKYLVMDEADRILNLDFEVELDKILKVLP-- 168
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSAT+ KKL+ SLK V +
Sbjct: 169 ----------------------RERRTFLFSATMTKKV---KKLERASLKDPVKVEVSSK 203
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+T+ KL + ++ + KD YL +IL+ ++F
Sbjct: 204 YQTV----------------------EKLLQYYVFIPAKFKDVYLVHILNELAGNSFMIF 241
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
C++ + +L+ LG+ LH QM Q RL
Sbjct: 242 CSTCNNTVRTALMLRALGLAAVPLHGQMSQNKRL 275
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea okayama7#130]
Length = 455
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 155/341 (45%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++++ ++ +K PT IQ +P A +G+D+IG AETGSGKT AF LPI+Q+L EE
Sbjct: 30 LLEALEQVGYKSPTEIQSESLPHAL-EGRDIIGVAETGSGKTAAFALPILQKLWEE---- 84
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A ++ PTRELA Q++ + + + R IVGGM
Sbjct: 85 ---------------PKG-LFACVLAPTRELAYQISQQFEALGAAMGARCAVIVGGMDLP 128
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP VVV TPGRL + + E L TL F VLDEADR+++ + I
Sbjct: 129 TQAIALAKRPHVVVATPGRLLQHLE--ETKGFSLRTLKFLVLDEADRLLDMDFGPAIDKI 186
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P K+R T +FSAT+ KL+ SL +
Sbjct: 187 LKLIP------------------------KERTTYLFSATMTSKV---AKLQRASLVNPV 219
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V +T+S L + ++ +DK L Y+ +
Sbjct: 220 RVEVSGKYQTVS----------------------TLLQHYLLVPLKDKVVMLIYLANSLA 257
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
Q I+F ++ R +S +L+ LG LH Q+ Q RL
Sbjct: 258 QNSIIIFTRTVRDARLLSIILRTLGFPAVPLHGQLSQSQRL 298
>gi|442314863|ref|YP_007356166.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
gi|441483786|gb|AGC40472.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-2]
Length = 376
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 168/354 (47%), Gaps = 70/354 (19%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
F + +L L ++K+I + PT IQ+ IP +G+D+IG A+TG+GKT AF +P
Sbjct: 5 FMNFTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGRDLIGCAQTGTGKTAAFSIP 63
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
++Q +L E K K +RALI+TPTRELA+Q+ ++++ +K +N+
Sbjct: 64 LLQ-ILSETPKKGK----------------SVRALILTPTRELAIQIQENIEQYSKFLNI 106
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ + I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM
Sbjct: 107 KHLSIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRM 163
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G +++ I+ +P KKRQTL FSAT+
Sbjct: 164 LDMGFVNDVKKILTKVP------------------------KKRQTLFFSATMP------ 193
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
NSI +E + N A V +T + A +E+S ++ DK
Sbjct: 194 -----------------NSIRQFAET--ILDNPAEVTVTPVSSTAKTIEQSVYFVEKNDK 234
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L IL + R+++F + + L GI +H Q AR K
Sbjct: 235 TNLLINILKDTSELRSLIFTRTKHGADRLVKQLGRTGIFAAAIHGNKSQNARQK 288
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 160/341 (46%), Gaps = 72/341 (21%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L+K++ ++ FK+PT IQ +P+A G+D+IG AETGSGKT AF LPI+Q+L EE
Sbjct: 26 LLKALDQVNFKQPTEIQSQALPSAL-LGRDIIGVAETGSGKTAAFALPILQKLWEE---- 80
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
PKG L A I+ PTRELA Q++ + + + VR + +VGG+
Sbjct: 81 ---------------PKG-LFACILAPTRELAYQISQQFESLGSAMGVRCLVLVGGVDRM 124
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L RP ++V TPGRL + + + L +L F VLDEADR+++ ++ I
Sbjct: 125 PQAVALAKRPHIIVATPGRLNDHLQNTKG--FSLRSLKFLVLDEADRLLDMDFGPDIDQI 182
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ ++P K+R T +FSAT+ KL+ SL +
Sbjct: 183 LKVIP------------------------KERTTYLFSATMTTKV---AKLQRASLSNPV 215
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V + +T+S L + ++ KD +L Y+++
Sbjct: 216 RVEVSSKYQTVS----------------------TLLQYYLFIPLAQKDVHLVYLVNSLA 253
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
I+F ++ + +S +L+ LG LH Q+ Q RL
Sbjct: 254 SNSIILFTRTVHDAQRLSIVLRTLGFPAVPLHGQLSQSQRL 294
>gi|402077170|gb|EJT72519.1| ATP-dependent RNA helicase DRS1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 827
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 163/358 (45%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ + L +++ + + F +PTPIQ IP A GKDV+G A+TGSGKT AF +PI+
Sbjct: 284 SFQGMSLSRPILRGLASVGFGKPTPIQAKAIPMAL-MGKDVVGGAQTGSGKTGAFMVPIL 342
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y PK R +++TPTRELA+Q +A ++
Sbjct: 343 ERLL-------------------YRPKKVPTSRVVVLTPTRELAIQCHAVAIKLASHTDI 383
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ VGG+S + QE L+ RP+V++ TPGR + M V+ T+ VLDEADRM
Sbjct: 384 KFCLAVGGLSLKVQEAELRLRPDVIIATPGRFIDHMRNSASFAVD--TVEILVLDEADRM 441
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ LP K RQT++FSAT+
Sbjct: 442 LEDGFADELNEILTTLP------------------------KSRQTMLFSATMT------ 471
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIECK--- 469
+S++TL RAG+ V I VD V L + F+ +
Sbjct: 472 -----------------SSVDTLI-RAGLNKPVRIMVDSQKKTV--GTLVQEFVRLRPGR 511
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
EE + YL ++ R I+F H + +LG+ LH M Q R++
Sbjct: 512 EEKRMGYLVHLCKKLYTERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMNQTQRIQ 569
>gi|375007039|ref|YP_004980670.1| DEAD-box ATP-dependent RNA helicase cshA [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359285886|gb|AEV17570.1| DEAD-box ATP-dependent RNA helicase cshA [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 467
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 166/356 (46%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L +MK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ ++AL++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV--------------------NVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG ++Q R LK P V+VGTPGR+ + ++ G L +HT+ VLDEAD M+
Sbjct: 103 PIYGGQDIDRQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILSHVP------------------------AERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V +++ ++E E+ K
Sbjct: 187 --------------DPIRRIAERFMNEPELVKVKAKEMTV--PNIQQYYLEVHEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|358053682|ref|ZP_09147418.1| putative helicase [Staphylococcus simiae CCM 7213]
gi|357256869|gb|EHJ07190.1| putative helicase [Staphylococcus simiae CCM 7213]
Length = 507
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 173/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + ++++ + FKEPTPIQK IP A QG D++G A+TG+GKT AFG+P++
Sbjct: 4 FKELGVSDNTVQTLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK K +++LI+ PTRELA+QV + L+ ++G NV+VV
Sbjct: 62 --------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQNVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+
Sbjct: 102 TVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P ++RQT++FSAT+ + + L
Sbjct: 159 GFIDDMRFIMDKIPA-----------------------QQRQTMLFSATMPKAI---QAL 192
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+KS + + +N+ +S+ ++EE + KE +K
Sbjct: 193 VQQFMKSPKIIKTMNN--EMSD--------------------PQIEEYYTIVKELEKFET 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|196001667|ref|XP_002110701.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
gi|190586652|gb|EDV26705.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
Length = 722
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 136/238 (57%), Gaps = 16/238 (6%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I AW+E L L+ I L++ EPTPIQ+ IP Q +D+IG AETGSGKT A
Sbjct: 288 IPNPLRAWSESELSKELLDIISDLKYNEPTPIQRQAIPIGL-QNRDIIGVAETGSGKTAA 346
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + K++ + + YA +I+ PTRELA Q+ + K
Sbjct: 347 FLIPLLVWIT----SLPKIVREADIDQGPYA-------IIMAPTRELAQQIEEEAARFGK 395
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V ++GG++ E+Q LL+ E+V+ TPGRL +++ +LV L+ ++ VLDE
Sbjct: 396 PVGIRTVAVIGGLNREEQGFLLRQGCEIVIATPGRLLDVLDNS--YLV-LNQCTYVVLDE 452
Query: 350 ADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVS-SLQRKKRQTLVFSATI 406
ADRMI+ G ++QSI++ LP++N Q N + + + + RQT++F+AT+
Sbjct: 453 ADRMIDMGFEPDVQSILEYLPVSNQKPDTDDAQDPNKIRLKLGDKNRYRQTVMFTATM 510
>gi|422932838|ref|ZP_16965763.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339892024|gb|EGQ80925.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 296
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 73/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI+
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPII- 68
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E + +++A+++TPTRELALQV + + ++ ++V+
Sbjct: 69 --------------------ETFEHLDYIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 108
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +F+LDEAD M+
Sbjct: 109 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFILDEADEMLNM 165
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN + ++ L FSAT+
Sbjct: 166 GFVEDIEKI---LTFTN---------------------EDKRMLFFSATMPEEI------ 195
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
K + N + E L+ +++ DLT E+ + E E DK
Sbjct: 196 ------MKVAKNHMKEYEVLA----VKSRELTTDLT---------EQIYFEVNERDKFEA 236
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + IVFC + + I L G D LH + Q R
Sbjct: 237 LCRIIDLTKEFYGIVFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 285
>gi|288959329|ref|YP_003449670.1| DEAD-box ATP-dependent RNA helicase [Azospirillum sp. B510]
gi|288911637|dbj|BAI73126.1| DEAD-box ATP-dependent RNA helicase [Azospirillum sp. B510]
Length = 512
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 163/356 (45%), Gaps = 68/356 (19%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
T ++ L L L++++ + TPIQ IP G+DV+G A+TG+GKT AF
Sbjct: 6 TSMTEFSGLGLIEPLLRAVAEEGYSTATPIQAGAIPLLL-AGRDVLGLAQTGTGKTAAFT 64
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
LPI+QRL + +++ A R LI+TPTRELALQ+ D + +
Sbjct: 65 LPILQRLFQNKKRVAAKSP---------------RVLILTPTRELALQIGDSFTTYGRHL 109
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+R I GG+ Q + EV++ TPGRL +LM+ + H V L + FVLDEAD
Sbjct: 110 PIRRTVIHGGVGQSPQVAAIARGVEVLIATPGRLLDLMA--QNH-VNLGAIEVFVLDEAD 166
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
RM++ G R+++ ++ +LP K+RQTL+FSAT+
Sbjct: 167 RMLDMGFIRDVRKVVAVLP------------------------KERQTLLFSATM----- 197
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
V+ NSI T +ER +++T ++ + + +
Sbjct: 198 -----------PDAVVDLANSILTDAER---------IEVTPQSTTVERINQRVLFVERG 237
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
DK L +L RTIVF + I+ LK GI +H Q AR++
Sbjct: 238 DKRRLLADLLEDEAMARTIVFARTKHGADRIADHLKKAGITADAIHGDKSQSARVR 293
>gi|421861510|ref|ZP_16293512.1| DNA and RNA helicase [Paenibacillus popilliae ATCC 14706]
gi|410828936|dbj|GAC43949.1| DNA and RNA helicase [Paenibacillus popilliae ATCC 14706]
Length = 517
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 168/355 (47%), Gaps = 83/355 (23%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ EL L P L+++I L F+E TPIQ+ IP A G+D+IG A+TG+GKT AFG+P++
Sbjct: 6 TFVELGLEPKLLQAITELGFEEATPIQEIAIPVAM-MGRDLIGQAQTGTGKTAAFGIPLI 64
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ D EE + AL++TPTRELA+QV + + + + VR
Sbjct: 65 SKI------------DPSEE--------RVVALVMTPTRELAIQVAEEIGKLTRFKGVRS 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+PI GG +Q R LK P++++GTPGRL + ++ + + L+ + VLDEAD M++
Sbjct: 105 LPIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLNDVQTVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSA 410
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 162 MGFMEDITSILSLVP------------------------EERQTMLFSATMPPNIQKLAN 197
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
F + +H S+ KQ V A +E+++IE E
Sbjct: 198 QFLRDPEHVSVIPKQ------------------------------VSAPLIEQAYIEVPE 227
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L +L + IVF + + +S L+ G LH + Q R
Sbjct: 228 RVKFDALSRLLDMESPELAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQR 282
>gi|374292975|ref|YP_005040010.1| ATP-dependent RNA helicase [Azospirillum lipoferum 4B]
gi|357424914|emb|CBS87794.1| ATP-dependent RNA helicase [Azospirillum lipoferum 4B]
Length = 506
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 68/342 (19%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L++++ + TPIQ IP G+DV+G A+TG+GKT AF LPI+QRL + +++
Sbjct: 13 LLRAVAEEGYSTATPIQAGAIPLLL-AGRDVLGLAQTGTGKTAAFTLPILQRLFQNKKRV 71
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
A +P R LI+TPTRELALQ+ D + + +R I GG+
Sbjct: 72 AA-----------KSP----RTLILTPTRELALQIGDSFTTYGRHLPIRRTVIHGGVGQS 116
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q + EV++ TPGRL +LM+ + H V L + FVLDEADRM++ G R+++ +
Sbjct: 117 PQVAAIARGTEVLIATPGRLLDLMA--QNH-VRLDQIEVFVLDEADRMLDMGFIRDVRKV 173
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+ +LP K+RQTL+FSAT+
Sbjct: 174 VAVLP------------------------KERQTLLFSATM----------------PDA 193
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V+ NSI T +ER +++T ++ + + + DK L +L
Sbjct: 194 VVDLANSILTDAER---------IEVTPQSTTVERINQRVLFVERSDKRRLLADLLEDSA 244
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
RTIVF + I+ LK GI +H Q AR++
Sbjct: 245 MARTIVFARTKHGADRIADHLKKAGIAADAIHGDKSQSARVR 286
>gi|222423183|dbj|BAH19569.1| AT4G16630 [Arabidopsis thaliana]
Length = 686
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 70/359 (19%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
+S D + EL L L+++ L +K+PTPIQ ACIP A G+D+ +A TGSGKT A
Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLAL-TGRDLCASAITGSGKTAA 220
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL--RALIITPTRELALQVTDHLKGV 287
F LP ++RLL + PK R LI+TPTRELA+Q+ ++ +
Sbjct: 221 FALPTLERLL-------------------FRPKRVFATRVLILTPTRELAVQIHSMIQNL 261
Query: 288 AKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVL 347
A+ +++ IVGG+S +QE +L++ P++VV TPGR+ + + V+L L+ +L
Sbjct: 262 AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMS--VDLDDLAVLIL 319
Query: 348 DEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA 407
DEADR+++ G E+ ++ + P K+RQT++FSAT+
Sbjct: 320 DEADRLLQTGFATEITELVRLCP------------------------KRRQTMLFSATMT 355
Query: 408 LSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIE 467
KL LN LS R LT V +
Sbjct: 356 EEVKELVKL------------SLNKPLRLSADPSARRPPG---LTEEVVRIRR------- 393
Query: 468 CKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+E +++A L + + + + I+F + A + L + G+ LH + Q RL
Sbjct: 394 TREANQEAVLLSLCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRL 452
>gi|222149464|ref|YP_002550421.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
gi|221736447|gb|ACM37410.1| ATP-dependent RNA helicase [Agrobacterium vitis S4]
Length = 484
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 171/356 (48%), Gaps = 73/356 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E ++NEL L P ++ ++ +L F+ PTPIQ IP G+D+IG A+TG+GKT AFGL
Sbjct: 16 ELTSFNELGLSPTVVATLTQLGFETPTPIQAQGIPVVM-AGRDLIGLAQTGTGKTAAFGL 74
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI++ L+++ E+ R LI+ PTREL Q+ D+L+ +
Sbjct: 75 PIIELLMKD---------------ERRPDNRTTRTLILAPTRELVNQIGDNLRSFIRKTP 119
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+++ +VGG S KQ+ L+ +++V TPGRL +L+S ++ + L ++ VLDEAD+
Sbjct: 120 IKINQVVGGASINKQQLQLERGTDILVATPGRLLDLIS---RNAISLRAVTHLVLDEADQ 176
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
M++ G +L+ I M+P KRQTL+FSAT+
Sbjct: 177 MLDLGFIHDLRKIAKMVP------------------------AKRQTLLFSATMP----- 207
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAG-MRANVAIVDLTNMCVLANKLEE--SFIECK 469
+ +++ AG N V+++ A+K+E+ F+ +
Sbjct: 208 ---------------------KAIADLAGSFLNNPVTVEVSPPGKAADKVEQYVHFVNGQ 246
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L L+ H GR+IVF + + L+I G V ++H Q R
Sbjct: 247 NH-KTELLKKTLADHPDGRSIVFLRTKHGAEKLMKHLEITGFSVASIHGNKSQGQR 301
>gi|384246378|gb|EIE19868.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 508
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 190/434 (43%), Gaps = 89/434 (20%)
Query: 111 DGDEDGSGV-----QKQEEKNLKNETGKKKKKK--KKGKKIKTVEESVAVSNGPDDAEEE 163
DG ED +G+ Q ++ + + ETG +K + K+VE++ A A +E
Sbjct: 4 DGLEDTTGITLFAKQTKKRRRKEKETGDAAQKPPPETENDSKSVEQNTAALGAETAANDE 63
Query: 164 LVNEAEISTEFD-----AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIG 218
E ++ + L + L + L PT +Q+ CIPA G+DV+G
Sbjct: 64 ATERQEPASTSGQEAPVTFRSLGISEWLDRVCKSLGMVRPTQVQRGCIPAIL-GGRDVLG 122
Query: 219 AAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELAL 278
A TGSGKT AF LPI+QRL E P G + AL++TPTRELA+
Sbjct: 123 TAHTGSGKTAAFALPILQRLARE-------------------PYG-IFALVLTPTRELAM 162
Query: 279 QVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVE 338
Q+ D + + G+++ ++GG+ + Q + L RP ++V TPGRL +L+S
Sbjct: 163 QLADQFRALGSGMSLTDAVVIGGLDMQSQAKALAQRPHIIVATPGRLRDLLSAHADLAEG 222
Query: 339 LHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQ 398
+ ++F VLDEADR++E EL+ I LP +RQ
Sbjct: 223 FNRVAFLVLDEADRLLEPTFESELRVIASHLP------------------------AQRQ 258
Query: 399 TLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLA 458
TL+FSAT+ S+ TL A A + D A
Sbjct: 259 TLLFSATLT-----------------------RSLATLQASALRDAFLFQADAYEGLETA 295
Query: 459 NKLEESFIECKEEDKDAYLYYIL------SVHGQGRTIVFCTSIAALRHISSLLKILGID 512
L E ++ + ++ YL ++L S+ IVFC++ +S LL LG+
Sbjct: 296 VNLREDYLFIPAKVRELYLVHVLESLEEFSIRS---AIVFCSTCRGCHLLSLLLAELGVA 352
Query: 513 VWTLHAQMQQRARL 526
LH+ + Q RL
Sbjct: 353 SVALHSHLTQGRRL 366
>gi|255544624|ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 442
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 168/357 (47%), Gaps = 74/357 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E + EL + L+ + L +K PT IQ IP A +GKD+IG A+TGSGKT AF L
Sbjct: 7 EVKTFKELGVCDQLVTACDNLGWKNPTKIQIESIPHAL-EGKDLIGLAQTGSGKTGAFAL 65
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q LLE EK+ + A +++PTRELA+Q+ + + + I
Sbjct: 66 PILQSLLEASEKSVQAF----------------FACVLSPTRELAIQIAEQFEALGSDIG 109
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
V+ +VGG+ +Q L RP +VV TPGRL + +S + L TL + VLDEADR
Sbjct: 110 VKCAVLVGGVDMVQQSIALGKRPHIVVATPGRLVDHLSNTKGF--SLRTLKYLVLDEADR 167
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ + L I+ ++P ++R+T +FSAT+
Sbjct: 168 LLNEDFEKSLDEILKVIP------------------------RERRTFLFSATMTKKV-- 201
Query: 413 RKKLKHGSLKSK---QSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECK 469
KKL+ L++ ++ + ++++TL K E FI K
Sbjct: 202 -KKLQRACLRNPVKIEAASKYSTVDTL-----------------------KQEYRFIPAK 237
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
KD YL YIL+ ++VF + A ++ +L+ LG+ ++ M Q RL
Sbjct: 238 Y--KDCYLVYILTEKSGSTSMVFTRTCDATTFLALVLRNLGLRAIPINGHMTQSKRL 292
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 184/357 (51%), Gaps = 41/357 (11%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I F +W+E ++ I ++ +KEPTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 381 IPNPFRSWSETGFPKEILDIIDKVGYKEPTPIQRQAIPIGL-QNRDIIGIAETGSGKTLA 439
Query: 230 FGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK 289
F +P++ + + K+ D+ E A++ P A+I+ PTRELA Q+ + + +
Sbjct: 440 FLIPLLTWI----QSLPKI--DRLETADQ-GP----YAIILAPTRELAQQIEEETQKFGQ 488
Query: 290 GINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDE 349
+ +R V +VGG+S E+Q L+ E+V+ TPGRL +++ ++LV L+ ++ VLDE
Sbjct: 489 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LNQCTYIVLDE 545
Query: 350 ADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIAL 408
ADRMI+ G ++Q I++ +P+TN + ++E + + ++K RQT++F+AT+
Sbjct: 546 ADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATMPP 605
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ + +L L+ +V + S+ +ER ++
Sbjct: 606 AVE---RLARTYLRRPATVY-IGSVGKPTERTEQIVHIMT-------------------- 641
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E +K L ILS + I+F ++ L+ LG + TLH Q R
Sbjct: 642 -ENEKRKKLMEILSRGVEPPCIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQR 697
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 140/243 (57%), Gaps = 26/243 (10%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I W+E L ++ I L +K+PTPIQ+ IP Q +D+IG AETGSGKTLA
Sbjct: 153 IPNPLRKWSESGLPSSILDIIKELGYKDPTPIQRQAIPIGL-QNRDIIGVAETGSGKTLA 211
Query: 230 FGLPIMQRL-----LEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHL 284
F LP++ + +E +E A D+G A+I+ PTRELA Q+ +
Sbjct: 212 FLLPLLVWITSLPKIERQEDA-----DQGP-----------YAIIMAPTRELAQQIDEET 255
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
AK + +R V ++GG+S E+Q L+ E+V+ TPGRL +++ ++LV L ++
Sbjct: 256 TKFAKMLEIRSVAVIGGLSREEQGFRLRLGCEIVIATPGRLIDVLEN--RYLV-LSRCTY 312
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFS 403
VLDEADRMI+ G E+Q I+D +P+TN + ++E + + + + K RQT++F+
Sbjct: 313 IVLDEADRMIDMGFEGEVQKILDYMPVTNQKPDTDEAEDEEKLLANFASKHKYRQTVMFT 372
Query: 404 ATI 406
AT+
Sbjct: 373 ATM 375
>gi|345564525|gb|EGX47487.1| hypothetical protein AOL_s00083g423 [Arthrobotrys oligospora ATCC
24927]
Length = 451
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 172/352 (48%), Gaps = 55/352 (15%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ L + P L+ S+ + K PTPIQ ACIP +GK+ IG + TGSGKT+AF +PI+Q
Sbjct: 5 FASLGVKPWLVTSLGAMAIKRPTPIQAACIPEIL-KGKNCIGGSRTGSGKTVAFAVPILQ 63
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ P G + ALI+TPTRELALQ+ + + N+++
Sbjct: 64 MWAQD-------------------PFG-VFALILTPTRELALQLAEQFTALGSPQNLKLS 103
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMIE 355
I+GG+ Q L +P VV+ TPGRL + + S G + L + V+DEADR+++
Sbjct: 104 LIIGGVDMRTQAISLSQKPHVVIATPGRLADHIRSSGADTIAGLRRVRVVVMDEADRLLD 163
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G EL + ++P G ++T+ RQTL+F+AT+ S +
Sbjct: 164 EGFAEELVECLSVVPDQFG------DKTKGI--------PARQTLLFTATVTESV---RA 206
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
LK G +++ E+ G ++ +D ++ V L +++I A
Sbjct: 207 LKEGEGRAR-------------EKGGREVFISEIDTDSLAV-PPTLHQTYIFKPSTVHLA 252
Query: 476 YLYYILSVHGQGR--TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+L+ +LS G + TI+F + +S LK LG V LH+ + QR R
Sbjct: 253 FLHTLLSTPGNIKKSTIIFTNKKTTAQLLSHTLKPLGHRVTPLHSDLSQRER 304
>gi|212526914|ref|XP_002143614.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
gi|210073012|gb|EEA27099.1| ATP-dependent RNA helicase , putative [Talaromyces marneffei ATCC
18224]
Length = 474
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 188/400 (47%), Gaps = 77/400 (19%)
Query: 137 KKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDA----WNELRLHPLLMKSIYR 192
KK+K K VE+ VS+ +EEE+ + E E D+ + +L L P L ++
Sbjct: 5 KKRKISHEKLVEKD-EVSDDASSSEEEVQDRDE-KDEADSAPKTFKDLGLIPQLCEACET 62
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
L +K PT IQ IP A Q +D+IG AETGSGKT AF LPI+Q L+++
Sbjct: 63 LGYKAPTAIQAESIPLAL-QNRDLIGLAETGSGKTAAFALPILQALMDK----------- 110
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
P+ L++ PTRELA Q+++ + + I+VR V +VGGM Q +
Sbjct: 111 --------PQPFF-GLVLAPTRELAYQISEAFEALGSTISVRSVVLVGGMDMVPQAIAIG 161
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
RP ++V TPGRL + + + L +L + V+DEADR+++ + I+ +LP
Sbjct: 162 KRPHIIVATPGRLLDHLENTKG--FSLRSLKYLVMDEADRLLDMDFGPIIDKILKVLP-- 217
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
++R+T +FSAT++ +
Sbjct: 218 ----------------------RERRTFLFSATMS-----------------------SK 232
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+E+L +RA + + + +N + L + ++ + KD +L ++L+ H TI+F
Sbjct: 233 VESL-QRASLSNPLRVSVSSNKYQTVSTLLQYYMFIPHKHKDVHLIWLLNEHIGQTTIIF 291
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
+I ++ L + LG LH Q+ Q +RL S+
Sbjct: 292 TRTIHETNRLALLTRFLGFSAIALHGQLSQSSRLASISKF 331
>gi|219123243|ref|XP_002181938.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406539|gb|EEC46478.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 433
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 157/341 (46%), Gaps = 71/341 (20%)
Query: 186 LMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKA 245
L ++ RL++K T IQ + +P A +G+D+IG AETGSGKT AF LPI+Q LL + K
Sbjct: 50 LQEACDRLEWKTATRIQASVLPEA-FEGRDIIGLAETGSGKTGAFCLPILQGLLRKPVKG 108
Query: 246 AKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTE 305
ALI+TPTRELA Q+ ++G+ + + V +VGG+
Sbjct: 109 TA-------------------ALILTPTRELAFQILQVVQGLGQAMGATAVCVVGGVDRT 149
Query: 306 KQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSI 365
Q L P VV+ TPGRL + + + L+ + + VLDEADRM+ EL I
Sbjct: 150 SQAIALGRNPHVVIATPGRLLDHLKDTKGF--NLNKVRYLVLDEADRMLSMDFEEELHQI 207
Query: 366 IDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQ 425
+D +P ++RQTL+FSAT+ KL+ SLK
Sbjct: 208 LDNMP------------------------EQRQTLLFSATMTTQV---AKLERASLKDPV 240
Query: 426 SVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHG 485
V +T +L +S++ + KD YL Y+++ H
Sbjct: 241 KVQVSTKFQT----------------------PKQLLQSYLFIPAKYKDCYLTYLINEHA 278
Query: 486 QGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+VF + ++ ++ +L+ LG LH QM Q RL
Sbjct: 279 GQSILVFGATCNNVQRLALMLRNLGFPAVCLHGQMDQSKRL 319
>gi|294783794|ref|ZP_06749118.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
1_1_41FAA]
gi|294480672|gb|EFG28449.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium sp.
1_1_41FAA]
Length = 529
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 72/349 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L ++K + + ++ PTPIQ+ IPA KD+IG A+TG+GKT AF LPI++
Sbjct: 10 FRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLPIIE 69
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
E ++ H++A+++TPTRELALQV + + ++ ++V+
Sbjct: 70 NF---------------ETSDH-----HIQAIVLTPTRELALQVAEEMNSLSTSKKMKVI 109
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
P+ GG S + Q +L+K +VVVGTPGR+ +L+ E+ L++L++L +FVLDEAD M+
Sbjct: 110 PVYGGQSIDIQRKLIKTGVDVVVGTPGRVIDLI---ERKLLKLNSLKYFVLDEADEMLNM 166
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I L TN ++ L FSAT+ K+
Sbjct: 167 GFIEDIEKI---LTFTNDD---------------------KRMLFFSATMPPEI---MKI 199
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K E +++ DLT E+ + E E DK
Sbjct: 200 AKTHMKE-------------YEVLAVKSRELTTDLT---------EQIYFEVNERDKFEA 237
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L I+ + + I+FC + + I L G D LH + Q R
Sbjct: 238 LCRIIDLTKEFYGIIFCRTKTDVNEIVGRLNDRGYDAEGLHGDIGQNYR 286
>gi|399055613|ref|ZP_10743308.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
gi|398046822|gb|EJL39406.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
Length = 529
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 74/354 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ LH ++++I+ + F+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 4 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-AGGDLIGQAQTGTGKTAAFGIPLV- 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 62 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 102 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLDM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II +P ++RQTL+FSAT+ K+L
Sbjct: 159 GFIEDIETIITHMP------------------------EERQTLLFSATMPPEI---KRL 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K Q++ ++ V A +E+ + + + +K
Sbjct: 192 ATRYMKQPQTIA----------------------VSREEVTAPLIEQVYYKVFDRNKVES 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L IL I+FC + + +S +L+ G LH + Q R K+ +
Sbjct: 230 LCRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMN 283
>gi|433545971|ref|ZP_20502309.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
gi|432182587|gb|ELK40150.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
Length = 549
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 169/354 (47%), Gaps = 74/354 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++ LH ++++I+ + F+EP+PIQ ACIP G D+IG A+TG+GKT AFG+P++
Sbjct: 24 FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVL-AGGDLIGQAQTGTGKTAAFGIPLV- 81
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
EK P ++A+++TPTRELA+QV L ++K VR +
Sbjct: 82 --------------------EKITPANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTL 121
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG S Q R L+ ++VVGTPGR+ + + L +HTL VLDEAD M++
Sbjct: 122 PIYGGQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTL---VLDEADEMLDM 178
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II +P ++RQTL+FSAT+ K+L
Sbjct: 179 GFIEDIETIITHMP------------------------EERQTLLFSATMPPEI---KRL 211
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K Q++ ++ V A +E+ + + + +K
Sbjct: 212 ATRYMKQPQTIA----------------------VSREEVTAPLIEQVYYKVFDRNKVES 249
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L IL I+FC + + +S +L+ G LH + Q R K+ +
Sbjct: 250 LCRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMN 303
>gi|315635445|ref|ZP_07890711.1| ATP-dependent RNA helicase DeaD [Arcobacter butzleri JV22]
gi|315480203|gb|EFU70870.1| ATP-dependent RNA helicase DeaD [Arcobacter butzleri JV22]
Length = 516
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 76/350 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+N+ LL K+I FKEP+PIQ+ IP G+D++G A TG+GKT AFGLPI+
Sbjct: 2 TFNDFNFKELLQKAIDEAGFKEPSPIQEQAIPYIL-DGRDIVGQAHTGTGKTAAFGLPIL 60
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ K + A++I PTRELA+QV+D L K + +
Sbjct: 61 NKI---------------------KAKSGVEAVVIVPTRELAMQVSDELYRFGKFLGINT 99
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+ GG + +Q +L++ V+V TPGR +L+ G + + F +LDEAD M++
Sbjct: 100 ATVYGGQAYARQIKLIE-NSSVIVATPGRFLDLLRGDKISIKP----KFVILDEADEMLD 154
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I LP + RQTL+FSAT+ + K
Sbjct: 155 MGFLDDIKEIFTFLP------------------------ENRQTLLFSATMPTAI---KN 187
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
L LK + V LT V +K+ ++F E+++D
Sbjct: 188 LAKTILKEPE----------------------FVTLTKSDVTNSKITQTFYVVDEKERDD 225
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L + ++I+FC + + +S+ L G LH M+Q+ R
Sbjct: 226 ALIRLFDFKNPKKSIIFCRTKKDVDRLSTFLVSQGFMAKALHGDMEQKQR 275
>gi|196250549|ref|ZP_03149239.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. G11MC16]
gi|196209898|gb|EDY04667.1| DEAD/DEAH box helicase domain protein [Geobacillus sp. G11MC16]
Length = 467
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L +MK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSKEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ G ++AL++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV--------------------DVKNGAIQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG E+Q R LK P V+VGTPGR+ + ++ G L + T+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILRHVP------------------------TERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V +++ ++E E+ K
Sbjct: 187 --------------DPIRRIAERFMNDPELVKVKAKEMTV--PNIQQYYLEVHEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|189188460|ref|XP_001930569.1| ATP-dependent RNA helicase DBP8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972175|gb|EDU39674.1| ATP-dependent RNA helicase DBP8 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 514
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 65/355 (18%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L + P L+ S+ ++ K PT IQ +CIP +GKD IG + TG+GKT+AF +PI+
Sbjct: 85 SFTSLNVAPWLVASLASMEIKRPTGIQASCIPEIL-KGKDCIGGSRTGTGKTVAFSVPIL 143
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
Q+ E+ P G + A+I+TPTRELA+Q+ + +K ++ +++
Sbjct: 144 QKWSED-------------------PSG-IFAVIVTPTRELAIQIYEQVKAISAPQSMKP 183
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEADRMI 354
+ I GG Q L +RP VV+ TPGRL E + + GE + L + F V DEADR++
Sbjct: 184 ILITGGSDQRSQAIALASRPHVVIATPGRLAEHIRTSGEDTICGLRRVKFVVFDEADRLL 243
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
G MLP + C++V ++ RQTL+F+AT+
Sbjct: 244 APGKG-------SMLP-----------DLETCLSVLP-PKESRQTLLFTATVTPEV---M 281
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDL-TNMCVLANKLEESFIECKEEDK 473
LKH RA R + + ++ T + +L++ +++ K
Sbjct: 282 ALKH------------------QPRAPGRLPIFVSEVDTEDLAIPPRLQQKYLQTPVTHK 323
Query: 474 DAYLYYILS--VHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
+ YL+ +L+ V+ I+FC + +L++L V LH+ ++Q R+
Sbjct: 324 ECYLHVLLNTPVNSTKSVIIFCNRTKTATLLEYMLRLLDHRVTALHSGLKQSDRV 378
>gi|254457480|ref|ZP_05070908.1| cold-shock deAd box protein a [Sulfurimonas gotlandica GD1]
gi|373867978|ref|ZP_09604376.1| DEAD/DEAH box helicase [Sulfurimonas gotlandica GD1]
gi|207086272|gb|EDZ63556.1| cold-shock deAd box protein a [Sulfurimonas gotlandica GD1]
gi|372470079|gb|EHP30283.1| DEAD/DEAH box helicase [Sulfurimonas gotlandica GD1]
Length = 531
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 160/350 (45%), Gaps = 74/350 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+++L L +++S+ + F P+PIQ A IP QG+D++G A TG+GKT AFGLP +
Sbjct: 19 TFDDLGLSQDILRSVKQAGFVTPSPIQAAAIPLIL-QGRDIVGQAHTGTGKTAAFGLPAL 77
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
+ + + L+ITPTRELA QV+D L + IN +
Sbjct: 78 NNI---------------------DVRNGVEILVITPTRELATQVSDELFKYGRNINAKT 116
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
V + GG S +Q L+ VVV TPGRL +++ G LV+ T S VLDEAD M++
Sbjct: 117 VTVYGGSSYNRQIDLIDRGASVVVATPGRLLDILKKG---LVKNFTPSIVVLDEADEMLD 173
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G ++ I LP KRQTL+FSAT+
Sbjct: 174 MGFLDDINEIFSYLPT------------------------KRQTLLFSATMP-------- 201
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
I+ L+ER + N + +T + +E+ + +E ++D
Sbjct: 202 ---------------KPIKLLAER--ILDNPEFISITKGETTNSDIEQLYYVIEESERDD 244
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
+ ++ +++VFC + + + +S++L G LH M+QR R
Sbjct: 245 AIIRLMDSEDTKKSVVFCRTKSEVDRLSNVLSNAGYLANGLHGDMEQRQR 294
>gi|381182260|ref|ZP_09891076.1| ATP-dependent RNA helicase DeaD [Listeriaceae bacterium TTU M1-001]
gi|380317854|gb|EIA21157.1| ATP-dependent RNA helicase DeaD [Listeriaceae bacterium TTU M1-001]
Length = 502
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 170/356 (47%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++E L ++KS+ R+ F+E TPIQ+ IP GKD+IG A+TG+GKT AFGLP++Q
Sbjct: 4 FSEFGLDEKIVKSVERMGFEEATPIQEKTIPIGL-AGKDLIGQAQTGTGKTAAFGLPMIQ 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ ++ G ++ALII PTRELA+QV++ L ++ +VRV+
Sbjct: 63 KIDQK--------------------NGDVQALIIAPTRELAIQVSEELYKLSYDKHVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG +Q R LK +P++VVGTPGR+ + ++ + ++L + VLDEAD M+
Sbjct: 103 AVYGGSDISRQIRSLKKKPQIVVGTPGRILDHIN---RRTLKLDNVQTLVLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++SI+ +P +RQTL+FSAT+
Sbjct: 160 GFIDDIESILKEVP------------------------SERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I + ER + + M L +E+ FI+ E++K
Sbjct: 187 --------------DPIRRIGERFMHDPEMVRIKAKEMTALL--IEQFFIKVHEKEKFDV 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L V IVF + + +S L + G +H + Q R+ + +
Sbjct: 231 LSRLLDVQSPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQAKRMSVLRKF 286
>gi|121705654|ref|XP_001271090.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|134034080|sp|A1CKJ0.1|DBP8_ASPCL RecName: Full=ATP-dependent RNA helicase dbp8
gi|119399236|gb|EAW09664.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 523
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 168/356 (47%), Gaps = 62/356 (17%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E +++ L + P L+ S+ L ++PT IQKACIP + GKD IG + TGSGKT+AF +
Sbjct: 91 EASSFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILN-GKDCIGGSRTGSGKTIAFSV 149
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
P++Q+ E+ P G + LI+TPTRELALQ+ + +K ++ +
Sbjct: 150 PMLQKWAED-------------------PLG-IFGLILTPTRELALQIFEQIKAISAPQS 189
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSGGEKHLVELHTLSFFVLDEAD 351
++ V I GG Q L RP VVV TPGRL + + S GE + L + VLDEAD
Sbjct: 190 MKPVLITGGTDMRSQALALAGRPHVVVATPGRLADHIKSSGEDTVCGLKRVRMVVLDEAD 249
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
R++ +G MLP + C++ +RQTL+F+AT+
Sbjct: 250 RLLSSGPG-------SMLP-----------DVETCLSALP-PSSERQTLLFTATVTPEVR 290
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
K + + K V E SE G + L++++++
Sbjct: 291 ALKNMPRAANKPPVFVT-----EISSESQG--------------TVPPTLKQTYLKVPLT 331
Query: 472 DKDAYLYYILSVHGQGR--TIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
++A+L+ +LS G I+FC + +L+ L V +LH+ + Q R
Sbjct: 332 HREAFLHVLLSTEGNSTKPAIIFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSER 387
>gi|108761880|ref|YP_632259.1| ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK 1622]
gi|108465760|gb|ABF90945.1| putative ATP-dependent RNA helicase RhlE [Myxococcus xanthus DK
1622]
Length = 501
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 163/352 (46%), Gaps = 74/352 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+++L+LH L++++ + PTPIQ+ IP A G+DV+G A+TG+GKT AF LPI+Q
Sbjct: 3 FDDLQLHDTLLRAVKAEGYTTPTPIQQKAIPHAL-AGRDVLGVAQTGTGKTAAFALPILQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKG---HLRALIITPTRELALQVTDHLKGVAKGINV 293
RL +AK AP G +R L++TPTRELA QV D KG+ +
Sbjct: 62 RL------SAK------------APAGGARPVRCLVLTPTRELAGQVGDSFGTYGKGLPL 103
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R I GG+ Q + L+ +V+V TPGRL +LM E+ V L +L FVLDEADRM
Sbjct: 104 RHAVIFGGVGQNPQVQTLRNGVDVLVATPGRLLDLM---EQGFVSLRSLEVFVLDEADRM 160
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
++ G +++ +I LP KRQTL FSAT L D
Sbjct: 161 LDMGFIHDVRRVIKALP------------------------PKRQTLFFSAT--LPPDI- 193
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDK 473
V+ SI T R V++T A + + + E K
Sbjct: 194 -------------VDLARSILTDPIR---------VEVTPASSTAETVSQQVYFVEREQK 231
Query: 474 DAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L ++L R +VF + ++ L+ G+ +H Q AR
Sbjct: 232 RGLLTHLLKEGNIHRALVFTRTKHGANRVAKQLEGAGVSSAAIHGNKSQNAR 283
>gi|50547049|ref|XP_500994.1| YALI0B16896p [Yarrowia lipolytica]
gi|74660102|sp|Q6CEB8.1|DRS1_YARLI RecName: Full=ATP-dependent RNA helicase DRS1
gi|49646860|emb|CAG83247.1| YALI0B16896p [Yarrowia lipolytica CLIB122]
Length = 753
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 182/399 (45%), Gaps = 85/399 (21%)
Query: 152 AVSNGPDDAEEELV--------NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQK 203
A+ GP D EE+ N + + + L L +MK I L ++ PTPIQ
Sbjct: 221 AIDEGPQDTAEEMAAFYAPEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPTPIQS 280
Query: 204 ACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG 263
IP A GKD++ A TGSGKT A+ +P+++RLL + K A
Sbjct: 281 RTIPIAL-MGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVAAT--------------- 324
Query: 264 HLRALIITPTRELALQVTDHLKGVAKGIN-VRVVPIVGGMSTEKQERLLKARPEVVVGTP 322
+ +++TPTREL++QV D K +A+ ++ VR VGG++ QE+ LK RPEVV+ TP
Sbjct: 325 --KVVVLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQELKTRPEVVIATP 382
Query: 323 GRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQ 382
GR + + V+ + V+DEADRM+E G +EL I+ +LP
Sbjct: 383 GRFIDHVRNSPSFNVD--DVEILVIDEADRMLEEGFQQELTEILTLLP------------ 428
Query: 383 TQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGM 442
KKRQTL+FSAT +NS + + +
Sbjct: 429 ------------KKRQTLLFSAT------------------------MNSSISSLIQLSL 452
Query: 443 RANVAIVDLTNMCVLANKLEESFIECKEED--KDAYLYYIL-SVHGQGRTIVFCTSIAAL 499
V ++ + A+ L + F+ ++ D K A L IL + + RTI+F
Sbjct: 453 SRPVRVM-INPPKQAASGLVQEFVRIRKRDHLKPALLASILKKMDKEQRTIIFVARKETA 511
Query: 500 RHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIRK 538
+ +L +LG+ + LH + Q RL Q IT +K
Sbjct: 512 HRLRIMLGLLGVRIGELHGALSQEQRL----QSITAFKK 546
>gi|392566869|gb|EIW60044.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 420
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 153/334 (45%), Gaps = 72/334 (21%)
Query: 193 LQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDK 252
+Q+K PT IQ +P A QG+D+IG A TGSGKT AF LPI+Q+L EE
Sbjct: 1 MQYKAPTEIQAEVLPHAL-QGRDIIGVASTGSGKTAAFALPILQKLWEE----------- 48
Query: 253 GEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLK 312
PKG L A ++ PTRELA+Q+ + + + VR I+GG+ Q+ L
Sbjct: 49 --------PKG-LFACVLAPTRELAVQIAQQFESIGSAMGVRCATIIGGVDIMAQKVALA 99
Query: 313 ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMT 372
+P +VV TPGRL + + E L +L F VLDEADR+++ + I+ ++P
Sbjct: 100 KKPHIVVATPGRLNDHLE--ETKGFSLRSLQFLVLDEADRLLDMDFGPIIDKILKVIP-- 155
Query: 373 NGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNS 432
K+R T +FSAT+ KL+ SL
Sbjct: 156 ----------------------KERTTYLFSATMTTKV---AKLQRASL----------- 179
Query: 433 IETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVF 492
+N +++ + + L + ++ KD +L Y+ + Q I+F
Sbjct: 180 -----------SNPVRIEVNSKYSTVSTLLQYYLLIPLPQKDVHLIYLANTLAQNSIIIF 228
Query: 493 CTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
++ + +S +L+ LG LH Q+ Q ARL
Sbjct: 229 TRTVHDAQRLSIILRTLGFPAIPLHGQLSQSARL 262
>gi|255722942|ref|XP_002546405.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
gi|240130922|gb|EER30484.1| ATP-dependent rRNA helicase RRP3 [Candida tropicalis MYA-3404]
Length = 483
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 162/354 (45%), Gaps = 72/354 (20%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
+F + EL L P L++SI ++F +PTPIQ IP A +GKD+IG A+TGSGKT AF +
Sbjct: 66 KFKTFKELNLVPDLLESIENMKFTKPTPIQSESIPHAL-EGKDIIGLAQTGSGKTAAFAI 124
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q L ++ L++ PTRELA Q+ + + +
Sbjct: 125 PILQSLWHAQQPYF--------------------GLVLAPTRELAFQIKETFDALGSSMG 164
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R IVGGM Q R L +P ++V TPGR+ + + + L L + V+DEADR
Sbjct: 165 LRSSCIVGGMDMMDQARDLMRKPHIIVATPGRIMDHLEHTKG--FTLKNLKYLVMDEADR 222
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
+++ L I+ ++P KR T +FSAT+
Sbjct: 223 LLDMDFGPALDKILKVIP------------------------TKRTTYLFSATMT----- 253
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
N IE L +RA + N V +++ A+ L +S + +
Sbjct: 254 ------------------NKIEKL-QRASLH-NPVRVAVSSKYQTADNLVQSMMLVNDGY 293
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ L ++L+ IVF ++A + + L +ILG + LH Q+ Q RL
Sbjct: 294 KNTILIHLLNEFMSKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRL 347
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 67/363 (18%)
Query: 166 NEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSG 225
+ A S E + + LHPLL+KSI + PTPIQ IP A +G+DV+GAA+TG+G
Sbjct: 6 SSAAPSAEALTFADFGLHPLLLKSIAETGYTSPTPIQAQAIPVVA-EGRDVMGAAQTGTG 64
Query: 226 KTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGH-LRALIITPTRELALQVTDHL 284
KT AF LPI+ RL+ +A +P H +RALI+TPTRELA QV +++
Sbjct: 65 KTAAFTLPILHRLMPLANSSA-------------SPARHPVRALILTPTRELADQVYENV 111
Query: 285 KGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSF 344
K + +R + GG+ Q+ L+ EV+V TPGRL + + E+ V L +
Sbjct: 112 KRYSLHTPLRSAVVFGGVDIGPQKEALRQGCEVLVATPGRLLDHV---EQKNVNLSQVGI 168
Query: 345 FVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
VLDEADRM++ G +L+ II +LP +RQ L+FSA
Sbjct: 169 LVLDEADRMLDMGFLPDLERIIRLLP------------------------PQRQGLLFSA 204
Query: 405 TIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEES 464
T S + RK + +N IE + A A+ + +
Sbjct: 205 T--FSNEIRK-------LGRSYLNQPVEIEVAARNA----------------TADTVTQI 239
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
+ E K A + +++ G + IVF + ++ L++ G+ ++H Q
Sbjct: 240 AYQMTGEAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLELDGVKAESIHGDKSQAD 299
Query: 525 RLK 527
R+K
Sbjct: 300 RMK 302
>gi|334348319|ref|XP_001371236.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like
[Monodelphis domestica]
Length = 459
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 171/381 (44%), Gaps = 80/381 (20%)
Query: 146 TVEESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKAC 205
T+E A G D +E V E + + +L + +L + +L +K PT IQ
Sbjct: 4 TMEHDTAA--GSSDPQETEVPETK------TFKDLGVTDVLCDACDQLGWKTPTKIQIEA 55
Query: 206 IPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHL 265
IP A G+D+IG AETGSGKT AF LPI+ LL+ ++
Sbjct: 56 IPMAL-DGRDIIGLAETGSGKTGAFALPILNALLDTPQR--------------------F 94
Query: 266 RALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRL 325
AL++TPTRELA Q+++ + + I V IVGG+ + Q L +P V++ TPGRL
Sbjct: 95 FALVLTPTRELAFQISEQFEALGSSIGVECAVIVGGIDSMSQSLALAKKPHVIIATPGRL 154
Query: 326 WELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQN 385
+ + + L L + V+DEADR++ E+ I+ ++P
Sbjct: 155 IDHLENTKGF--NLRALKYLVMDEADRILNMDFETEVDKILKLIP--------------- 197
Query: 386 CVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRAN 445
+ R+T +FSAT+ +KL+ +LK+ + +T+
Sbjct: 198 ---------RDRKTFLFSATMTKKV---QKLQRAALKNPVKCAVSSKYQTV--------- 236
Query: 446 VAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSL 505
KL++ ++ + KD+YL YIL+ +VFC++ + + L
Sbjct: 237 -------------EKLQQYYLFIPSKFKDSYLVYILNELAGNSFMVFCSTCNNTQRTALL 283
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L+ LG LH QM Q RL
Sbjct: 284 LRNLGFTAIPLHGQMSQNKRL 304
>gi|327352045|gb|EGE80902.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 834
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 159/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 312 SFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIIPIL 370
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R I+ PTRELA+Q + +A ++
Sbjct: 371 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 411
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 412 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 469
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+
Sbjct: 470 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMT------ 499
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIEC---K 469
N+++ L R G+ V + VD V L + F+ +
Sbjct: 500 -----------------NNVDKLI-RVGLNRPVRLMVDAKKQTV--GTLVQEFVRLRPGR 539
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + YL + + R I+F + + + ++G+ LH M Q R+K
Sbjct: 540 EDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRIIFGLMGLKAAELHGSMSQEQRIK 597
>gi|239612877|gb|EEQ89864.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ER-3]
Length = 834
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 159/358 (44%), Gaps = 78/358 (21%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
++ L +++ + + F PTPIQ+ IP A GKDV+G A TGSGKT AF +PI+
Sbjct: 312 SFQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALL-GKDVVGGAVTGSGKTGAFIIPIL 370
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPK--GHLRALIITPTRELALQVTDHLKGVAKGINV 293
+RLL Y P+ R I+ PTRELA+Q + +A ++
Sbjct: 371 ERLL-------------------YRPRKVPTSRVAILMPTRELAVQCYNVATKLATFTDI 411
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+VGG S +QE +LK RP+V++ TPGR + M V+ TL VLDEADRM
Sbjct: 412 TFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVD--TLEILVLDEADRM 469
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E+G EL I+ +P K RQT++FSAT+
Sbjct: 470 LEDGFADELNEILTTIP------------------------KSRQTMLFSATMT------ 499
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI-VDLTNMCVLANKLEESFIEC---K 469
N+++ L R G+ V + VD V L + F+ +
Sbjct: 500 -----------------NNVDKLI-RVGLNRPVRLMVDAKKQTV--GTLVQEFVRLRPGR 539
Query: 470 EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
E+ + YL + + R I+F + + + ++G+ LH M Q R+K
Sbjct: 540 EDKRLGYLMVLCKTIYKDRVIIFFRAKKEAHRVRIIFGLMGLKAAELHGSMSQEQRIK 597
>gi|407452329|ref|YP_006724054.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
gi|403313313|gb|AFR36154.1| Superfamily II DNA and RNA helicase [Riemerella anatipestifer
RA-CH-1]
Length = 371
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 167/351 (47%), Gaps = 70/351 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L ++K+I + PT IQ+ IP +G+D+IG A+TG+GKT AF +P++Q
Sbjct: 3 FTQLSLSSPILKAISDAGYTTPTAIQEKAIPTIL-EGRDLIGCAQTGTGKTAAFSIPLLQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+L E K K +RALI+TPTRELA+Q+ ++++ +K +N++ +
Sbjct: 62 -ILSETPKKGK----------------SIRALILTPTRELAIQIQENIEQYSKFLNIKHL 104
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
I GG+ KQER L ++++ TPGRL +LM G L+ L + VLDEADRM++
Sbjct: 105 SIFGGVPQGKQERALNQGVDILIATPGRLLDLMQQG---LLSLSQIEILVLDEADRMLDM 161
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+ +P KKRQTL FSAT+
Sbjct: 162 GFVNDVKKILTKVP------------------------KKRQTLFFSATMP--------- 188
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
NSI +E + N A V +T + A +E+S ++ DK
Sbjct: 189 --------------NSIRQFAET--ILDNPAEVTVTPVSSTAKTIEQSVYFVEKNDKTNL 232
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLK 527
L IL + R+++F + + L GI +H Q AR K
Sbjct: 233 LINILKDTSELRSLIFTRTKHGADRLVKQLGRTGIFAAAIHGNKSQNARQK 283
>gi|456864614|gb|EMF83013.1| DEAD/DEAH box helicase [Leptospira weilii serovar Topaz str.
LT2116]
Length = 533
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 74/355 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
++EL L + +I + F+E +PIQ IP + KD+IG A+TG+GKT AF +P ++
Sbjct: 6 FSELNLSAEIQNAIQEMGFEEASPIQSEAIPVILKR-KDIIGHAQTGTGKTAAFAIPTIE 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI-NVRV 295
LLE K HL+ALI+ PTREL +QV++ + + K N V
Sbjct: 65 -LLEVESK-------------------HLQALILCPTRELVIQVSEQFRKLMKYKGNFEV 104
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
VP+ GG E+Q + L+ P++V+ TPGR+ + M G + L + VLDEAD M++
Sbjct: 105 VPVYGGQEIERQLKALRKNPQIVIATPGRMMDHMRRGS---IRLDDIKIVVLDEADEMLD 161
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P+ RQT++FSAT+
Sbjct: 162 MGFREDMEFILKDTPID------------------------RQTIMFSATMT-------- 189
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I TL +R + + I+D+T+ + A K+E+ + E +E K
Sbjct: 190 ---------------DDILTLMKR--FQKHPQIIDVTHQKLSAPKIEQIYYEIQENAKGE 232
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFS 530
L ++ +VFC + A + + LLK G LH + Q+ R K+ +
Sbjct: 233 ALARLIEYRNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMN 287
>gi|380492419|emb|CCF34618.1| ATP-dependent rRNA helicase RRP3 [Colletotrichum higginsianum]
Length = 481
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 185/411 (45%), Gaps = 81/411 (19%)
Query: 136 KKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDA---------WNELRLHPLL 186
K++K K TV+ES V+ + V+E E E A + +L + L
Sbjct: 5 KRQKVSHKASTVKES-RVAERESSPAQSAVSEPEAEGEVTADAAEEVTKSFKDLGVVDSL 63
Query: 187 MKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAA 246
+ L + +PTPIQ IP A +D+IG AETGSGKT AF LP++Q LLE+
Sbjct: 64 CDACANLGYTKPTPIQAQSIPHAL-ANRDIIGLAETGSGKTAAFALPVIQALLEK----- 117
Query: 247 KMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEK 306
P+ L++ PTRELA Q+ + + I++R IVGG+
Sbjct: 118 --------------PQAFF-GLVLAPTRELAAQIGQQFEALGSLISLRTAVIVGGLDMVA 162
Query: 307 QERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSII 366
Q L +P V++ TPGRL + + + L +L + V+DEADR+++ + I+
Sbjct: 163 QAIALGKKPHVIIATPGRLVDHLEKTKG--FSLRSLKYLVMDEADRLLDMDFGPSIDKIL 220
Query: 367 DMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQS 426
+P ++R+T +FSAT++
Sbjct: 221 KFVP------------------------RERRTFLFSATMS------------------- 237
Query: 427 VNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQ 486
+ IE+L +RA +R V + +N + L + ++ KD +L Y+L+ H
Sbjct: 238 ----SKIESL-QRASLRDPVRVSISSNKYQTVSTLLQYYLFIPHTQKDVHLIYLLNEHAG 292
Query: 487 GRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQMITWIR 537
+ ++F ++A + ++ LL+ LG LH Q+ Q ARL ++ T R
Sbjct: 293 KKIMIFTRTVAETQRLAILLRSLGFGAIPLHGQLNQTARLGALNKFRTGTR 343
>gi|402814785|ref|ZP_10864378.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
gi|402507156|gb|EJW17678.1| DEAD-box ATP-dependent RNA helicase CshA [Paenibacillus alvei DSM
29]
Length = 526
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 83/355 (23%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
+ E L P ++++I L F+E TPIQ+ IP A G+D+IG A+TG+GKT AFG+P++
Sbjct: 3 TFAEFGLEPKVLQAITELGFEESTPIQEKAIPVAM-TGRDLIGQAQTGTGKTAAFGIPLI 61
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
++ D EE ++ALI+TPTRELA+QV D + + + VR
Sbjct: 62 SKI------------DPTEE--------RVKALIMTPTRELAIQVADEIGKLTRFKGVRS 101
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+PI GG +Q R LK P++++GTPGRL + ++ + + L ++ VLDEAD M++
Sbjct: 102 LPIYGGQDIGRQIRALKKHPQIIIGTPGRLLDHIN---RKTIRLDDVATVVLDEADEMLD 158
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----LSA 410
G ++ SI+ ++P ++RQT++FSAT+ L+
Sbjct: 159 MGFMEDITSILSLVP------------------------EQRQTMLFSATMPPNIQKLAN 194
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
F ++ +H S+ K V A +++++IE E
Sbjct: 195 QFLREPEHVSVMPKH------------------------------VSAPLIDQAYIEVPE 224
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
K L +L + IVF + + +S L+ G LH + Q R
Sbjct: 225 RVKFDALSRLLDMESPELAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQR 279
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 159/372 (42%), Gaps = 76/372 (20%)
Query: 160 AEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGA 219
A EE + E S+ + L +++ + + F PTPIQ+ IP GKD++G
Sbjct: 297 APEENTTDPEGSSSSSTFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLL-GKDLVGG 355
Query: 220 AETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKG--HLRALIITPTRELA 277
A TGSGKT AF +PI++RLL Y P+ R +I+ PTRELA
Sbjct: 356 AVTGSGKTAAFIIPILERLL-------------------YRPRKVPTSRVVILMPTRELA 396
Query: 278 LQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLV 337
+Q + +A ++ +VGG S +QE +LK RP+V++ TPGR + M V
Sbjct: 397 VQCYNVATKLATYTDITFCQLVGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTV 456
Query: 338 ELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKR 397
+ TL VLDEADRM+E+G EL I+ +P K R
Sbjct: 457 D--TLEILVLDEADRMLEDGFADELNEILTTIP------------------------KSR 490
Query: 398 QTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVL 457
QT++FSAT+ S D ++ GLN R +VD V
Sbjct: 491 QTMLFSATMTDSVDKLIRV------------GLN-----------RPVRLMVDAKKQTV- 526
Query: 458 ANKLEESFIECK---EEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
L + F+ + E + YL + R IVF + +LG+
Sbjct: 527 -GTLVQEFVRLRPGREGKRMGYLVLLCQTVYTNRVIVFFRQKKEAHRARIVFGLLGLKAA 585
Query: 515 TLHAQMQQRARL 526
LH M Q R+
Sbjct: 586 ELHGSMSQEQRI 597
>gi|307705294|ref|ZP_07642156.1| DEAD/DEAH box helicase family protein [Streptococcus mitis SK597]
gi|307621081|gb|EFO00156.1| DEAD/DEAH box helicase family protein [Streptococcus mitis SK597]
Length = 520
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 170/353 (48%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NEL L L+ I + F E +PIQ+ IP A +GKDVIG A+TG+GKT AFGLP ++
Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EEA ++AL+I PTRELA+Q + L + V+V
Sbjct: 62 KI-------------RTEEA-------TIQALVIAPTRELAVQSQEELFRFGRSKGVKVR 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG S EKQ + LK+ +VVGTPGRL +L+ L ++ TL +LDEAD M+
Sbjct: 102 SVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETL---ILDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II +P + RQTL+FSAT+ D K++
Sbjct: 159 GFLEDIEAIISRVP------------------------ESRQTLLFSATM---PDAIKRI 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K + V +A +LT V ++ +I KE++K A
Sbjct: 192 GVQFMKEPEHV-----------------KIAAKELTTELV-----DQYYIRVKEQEKFAT 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+ ++ V IVF + + ++ LKI G +H + Q RL++
Sbjct: 230 MTRLMDVEQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVL 282
>gi|302306296|ref|NP_982501.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|442570013|sp|Q75EW9.2|RRP3_ASHGO RecName: Full=ATP-dependent rRNA helicase RRP3
gi|299788450|gb|AAS50325.2| AAL041Cp [Ashbya gossypii ATCC 10895]
gi|374105700|gb|AEY94611.1| FAAL041Cp [Ashbya gossypii FDAG1]
Length = 486
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 185/422 (43%), Gaps = 80/422 (18%)
Query: 117 SGVQKQEEKNLKNET---GKKKKKKKKGKKIKTVEESVAV--SNGPDDAEEELVNE-AEI 170
S V KQ + + +E +K K+K + ++ EES A +N + E ++ E AE
Sbjct: 2 SKVTKQSKSHKSSELVSLAEKIKQKALENRKQSREESQATEEANTASETEAAVIEETAEP 61
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
F ++ EL L P L+++ L F +PTPIQ IP A QGKD+IG A+TGSGKT AF
Sbjct: 62 EEGFSSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPAL-QGKDIIGLAQTGSGKTAAF 120
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
+PI+ RL +++ A I+ PTRELA Q+ + +
Sbjct: 121 AIPILNRLWHDQQP--------------------YYACILAPTRELAQQIKETFDSLGSL 160
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
+ VR IVGGM+ Q R L +P +++ TPGRL + + + L L F V+DEA
Sbjct: 161 MGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGF--ALRKLQFLVMDEA 218
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSA 410
DR+++ L I+ +P K R T +FSAT+
Sbjct: 219 DRLLDMEFGPVLDRILKNIPT-----------------------KGRTTYLFSATMTSKI 255
Query: 411 DFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKE 470
D KL+ SL + N +T+ + L ++ I
Sbjct: 256 D---KLQRASLTNPVKCAVSNKYQTV----------------------DTLVQTLIVVPG 290
Query: 471 EDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR---LK 527
K+ +L Y+L+ TIVF + A IS L +L LH + Q R L
Sbjct: 291 GLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALD 350
Query: 528 LF 529
LF
Sbjct: 351 LF 352
>gi|253573302|ref|ZP_04850645.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251846830|gb|EES74835.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 518
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 168/357 (47%), Gaps = 83/357 (23%)
Query: 174 FDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLP 233
+ + + L P ++++I L F+E TPIQ IP A G+D+IG A+TG+GKT AFGLP
Sbjct: 1 MNTFADFGLEPKVLQAITELGFEEATPIQAKSIPIAL-SGRDLIGQAQTGTGKTAAFGLP 59
Query: 234 IMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINV 293
++ ++ +E ++ AL++TPTRELA+QV + + +++
Sbjct: 60 LINKIPKEEDRIV--------------------ALVMTPTRELAIQVAEEIGKLSRFKGT 99
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
R +PI GG +Q R LK +P++++GTPGRL + ++ + ++L + VLDEAD M
Sbjct: 100 RSLPIYGGQDIVRQIRALKKKPQIIIGTPGRLLDHIN---RKTIKLDDVKTVVLDEADEM 156
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIA-----L 408
++ G ++QSI+ ++P + RQT++FSAT+ L
Sbjct: 157 LDMGFMDDIQSILKLVP------------------------EDRQTMLFSATMPANIQKL 192
Query: 409 SADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIEC 468
+ F K +H S+ KQ V A +++++IE
Sbjct: 193 AQQFLKNPEHVSVIPKQ------------------------------VSAPLIDQAYIEV 222
Query: 469 KEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
E K L +L + IVF + + +S L+ G LH + Q R
Sbjct: 223 HERQKFDALTRLLDMESPELAIVFGRTKRRVDELSEALQKQGYSADGLHGDLSQNQR 279
>gi|302874235|ref|YP_003842868.1| DEAD/DEAH box helicase [Clostridium cellulovorans 743B]
gi|307689501|ref|ZP_07631947.1| DEAD/DEAH box helicase domain-containing protein [Clostridium
cellulovorans 743B]
gi|302577092|gb|ADL51104.1| DEAD/DEAH box helicase domain protein [Clostridium cellulovorans
743B]
Length = 536
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 72/355 (20%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
T+ +NEL L ++K+I + F+EP+PIQ IP +G D+IG A+TG+GKT AFG
Sbjct: 2 TKIKTFNELNLKDEILKAINDMGFEEPSPIQSESIPVGI-EGYDLIGQAQTGTGKTAAFG 60
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
I+ + E+R P+ ALI+ PTRELA+QV + L +AK +
Sbjct: 61 SIILNNMSEKRR----------------VPQ----ALILAPTRELAIQVNEELVRIAKNM 100
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
+ ++PI GG ++Q R L+ ++VVGTPGR+ + + + + + F VLDEAD
Sbjct: 101 RLNILPIYGGQPIDRQLRALRNGVDIVVGTPGRVLDHL---RRKSLNTEFVKFLVLDEAD 157
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
M+ G +++ ++ L + RQTL+FSAT+
Sbjct: 158 EMLNMGFIDDIEEVMKSL------------------------NEDRQTLLFSATMP---- 189
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
++I+ LS+R M+++ ++ + V A+ + + + E K
Sbjct: 190 -------------------DAIKRLSKRY-MKSDAKLISIEKNTVTASTITQYYYEIKNS 229
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D+ L I+ I+FC + + + S ++ G V +H M Q R+
Sbjct: 230 DRFESLCRIIDADEPEAAIIFCKTKKGVDELVSSMQRRGYVVEGMHGDMNQNQRM 284
>gi|357013855|ref|ZP_09078854.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus
elgii B69]
Length = 433
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 46/232 (19%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L+L P ++K++ + + +PTPIQ+ IP G+D+ G A+TG+GKT AF LPI+Q
Sbjct: 3 FEQLKLIPPILKALAKENYTQPTPIQEQAIPPVL-AGRDLFGCAQTGTGKTAAFLLPIIQ 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGH--LRALIITPTRELALQVTDHLKGVAKGINVR 294
L A++ P G +R+LI+TPTRELA+Q++D+ K + +N+R
Sbjct: 62 LL----------------SAQQRRPSGKRVIRSLILTPTRELAIQISDNFKAYGRFLNLR 105
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
IVGG+S + QE+ L+ ++++ TPGRL +LM+ G +L + VLDEADRM+
Sbjct: 106 SAVIVGGVSQKAQEQALEQGMDILIATPGRLIDLMNQG---FADLRHVQILVLDEADRML 162
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
+ G +++ II LP KRQTL FSAT+
Sbjct: 163 DMGFIHDMRRIIAKLP------------------------AKRQTLFFSATM 190
>gi|138893877|ref|YP_001124330.1| DEAD/DEAH box helicase [Geobacillus thermodenitrificans NG80-2]
gi|134265390|gb|ABO65585.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Geobacillus
thermodenitrificans NG80-2]
Length = 467
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 166/356 (46%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL L +MK+I R+ F+E TPIQ IP + Q KDVIG A+TG+GKT AFG+PI++
Sbjct: 4 FQELGLSKEVMKAIERMGFEETTPIQAKTIPLSL-QNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ G ++AL++ PTRELA+QV++ L + VRV+
Sbjct: 63 KV--------------------DVKNGVIQALVVAPTRELAIQVSEELYKIGAVKRVRVL 102
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG E+Q R LK P V+VGTPGR+ + ++ G L + T+ VLDEAD M+
Sbjct: 103 PIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVRTV---VLDEADEMLNM 159
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++I+ +P +RQTL+FSAT+
Sbjct: 160 GFIEDIEAILRHVP------------------------TERQTLLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+ I ++ER + V M V +++ ++E E+ K
Sbjct: 187 --------------DPIRRIAERFMNDPELVKVKAKEMTV--PNIQQYYLEVHEKKKFDI 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + IVF + + ++ L + G +H + Q RL + +
Sbjct: 231 LTRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKF 286
>gi|320038649|gb|EFW20584.1| ATP-dependent rRNA helicase RRP3 [Coccidioides posadasii str.
Silveira]
Length = 474
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 74/372 (19%)
Query: 157 PDDAEEELVNEAEI-STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKD 215
P EE N+ +I +T ++ +L + L ++ L +K PT IQ IP A QG+D
Sbjct: 29 PASLEETPGNDEKIEATTTKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLAL-QGRD 87
Query: 216 VIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRE 275
+IG AETGSGKT AF LPI+Q L+++ + + L++ PTRE
Sbjct: 88 LIGLAETGSGKTAAFALPILQALMDKPQS--------------------MFGLVLAPTRE 127
Query: 276 LALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKH 335
LA Q++ + + I+VR IVGGM Q L +P ++V TPGRL + + +
Sbjct: 128 LAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPGRLLDHLENTKG- 186
Query: 336 LVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRK 395
L +L + V+DEADR+++ L I+ +LP K
Sbjct: 187 -FSLRSLKYLVMDEADRLLDLDFGPILDKILKVLP------------------------K 221
Query: 396 KRQTLVFSATIALSAD-FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNM 454
+R+T +FSAT++ + ++ L+ S N ++ TL L N
Sbjct: 222 ERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTL--------------LQNC 267
Query: 455 CVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVW 514
++ +K KD YL Y+L+ IVF ++ + +++LL+ LG
Sbjct: 268 LIIPHK-----------HKDIYLIYLLNEFPGQSVIVFTRTVNETQRLANLLRALGFGAI 316
Query: 515 TLHAQMQQRARL 526
LH Q+ Q ARL
Sbjct: 317 PLHGQLSQSARL 328
>gi|406671543|ref|ZP_11078782.1| hypothetical protein HMPREF9706_01042 [Facklamia hominis CCUG
36813]
gi|405580793|gb|EKB54852.1| hypothetical protein HMPREF9706_01042 [Facklamia hominis CCUG
36813]
Length = 485
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 76/351 (21%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L L+ S+ L F+EPTPIQ+ IP A GKD+IG A+TG+GKT AFGLP++
Sbjct: 3 FTDLNLKNELLTSLDELGFEEPTPIQQQGIPIAL-SGKDLIGQAQTGTGKTAAFGLPLL- 60
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKG-HLRALIITPTRELALQVTDHLKGVAKGINVRV 295
K PK +++ALI+ PTRELA+QV + L ++K + V
Sbjct: 61 --------------------NKIDPKNTNVQALIVAPTRELAIQVQEELYRLSKVLKTNV 100
Query: 296 VPIVGGMSTEKQ-ERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+ GG +KQ +RL + +V+VGTPGRL +L+ ++++++L+ + VLDEAD M+
Sbjct: 101 YVVYGGAPIDKQIKRLRSQKVQVLVGTPGRLLDLL---KRNVLKLNAVQTLVLDEADEML 157
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
G ++++II P T RQTL+FSAT+ K
Sbjct: 158 NMGFIEDIKAIIQQAPET------------------------RQTLLFSATMP------K 187
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKD 474
+K L + +N +E ++A DL +E+ + C++++K
Sbjct: 188 AIK--ELAGQFLIN--------AEHIKIKAQYLTTDL---------IEQYYTRCRDDEKF 228
Query: 475 AYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
L + V + IVFC + + + L + G + +H + Q+ R
Sbjct: 229 DILTRFIDVQNPKQAIVFCRTKKRVDEVGRGLNLRGYNAELIHGDITQQKR 279
>gi|403387074|ref|ZP_10929131.1| ATP-dependent RNA helicase (superfamily II) [Clostridium sp. JC122]
Length = 546
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 174/350 (49%), Gaps = 72/350 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ +L L P ++++I L+F+ P+ IQ IP + +G D+IG A+TG+GKT+AFG P++
Sbjct: 6 FEDLNLKPSVLEAINDLKFEYPSDIQAKSIPVSL-EGFDLIGQAQTGTGKTVAFGAPLLS 64
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
L+E G+++A+I+ PTRELA+QV++ L + K +++
Sbjct: 65 -LME-------------------PSNGNVQAIILAPTRELAIQVSEELSKLNKYAQYKIL 104
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
PI GG S +KQ + LK ++VVGTPGR+ ++ + ++L F VLDEAD M+
Sbjct: 105 PIFGGQSIDKQLKPLKKGVDIVVGTPGRILYHIN---RKTLKLDHAKFLVLDEADEMLNM 161
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ II L +K+RQTL+FSAT+
Sbjct: 162 GFIEDIELIISNL------------------------KKERQTLLFSATMP--------- 188
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I++L++ M+++ + + + +K+++ + E ++DK
Sbjct: 189 --------------KAIKSLAKNY-MKSDAKHIAIAKQSLTVSKIKQFYFEVGQKDKLEA 233
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
L IL V I+FC + + + S L+ G V +H M+Q RL
Sbjct: 234 LCRILDVDAPKSAILFCKTKRGVDELVSALQSKGYIVEGMHGDMKQLQRL 283
>gi|404416449|ref|ZP_10998270.1| ATP-dependent RNA helicase [Staphylococcus arlettae CVD059]
gi|403491184|gb|EJY96708.1| ATP-dependent RNA helicase [Staphylococcus arlettae CVD059]
Length = 503
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 171/356 (48%), Gaps = 73/356 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+ EL + ++++ + F E TPIQK IP A GKDV+G A+TG+GKT AFG+P+++
Sbjct: 4 FKELGVSEKTVETLEAMGFSEATPIQKDSIPFAL-AGKDVLGQAQTGTGKTGAFGIPLIE 62
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
+++ G E ++ALI+ PTRELA+QV + LK +K V+VV
Sbjct: 63 KVV-------------GREG--------VQALILAPTRELAMQVAEQLKAFSKNQKVQVV 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GGM ++Q + LK P++VVGTPGR+ + ++ ++HTL +LDEAD M+
Sbjct: 102 TVFGGMPIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTADIHTL---ILDEADEMMNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G +++ I+D +P +EQ RQT++FSAT+
Sbjct: 159 GFIDDMRFIMDKIP---------AEQ--------------RQTMLFSATMP--------- 186
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+I+TL ++ N IV N ++EE + KE +K
Sbjct: 187 --------------KAIQTLVQQ--FMNNPEIVKTMNDKTSNPQIEEFYTIVKELEKFDT 230
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L VH IVF + + ++S L G LH + Q RL++ +
Sbjct: 231 FTNFLDVHQPELAIVFGRTKRRVDELTSALLTKGYKAEGLHGDITQAKRLEVLKKF 286
>gi|334340505|ref|YP_004545485.1| DEAD/DEAH box helicase [Desulfotomaculum ruminis DSM 2154]
gi|334091859|gb|AEG60199.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 532
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 73/357 (20%)
Query: 176 AWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIM 235
A+ +L+L P ++ + + F+EPTPIQ+ +P G D+IG A+TG+GKT AFG+P++
Sbjct: 9 AFGDLQLDPRVVDGLIDMGFEEPTPIQQLAVPLVL-AGHDIIGQAQTGTGKTAAFGIPLI 67
Query: 236 QRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRV 295
QRL + KG ++ +I+TPTRELA+QV + + + + +RV
Sbjct: 68 QRL-------------------DFRKKG-VQVIILTPTRELAIQVGEEITKIGRYRRIRV 107
Query: 296 VPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIE 355
+PI GG S ++Q + L+ +VVVGTPGRL + + + ++L ++ VLDEAD M++
Sbjct: 108 LPIYGGQSIDRQIKSLRQGVQVVVGTPGRLLDHL---RRQTLKLDQITMAVLDEADEMLD 164
Query: 356 NGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKK 415
G +++ I+ P RQTL+FSAT+
Sbjct: 165 MGFIEDIEEILRHTPPV------------------------RQTLLFSATMP-------- 192
Query: 416 LKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDA 475
+ I L+ + + V TN+ V ++E+ + E E+ K
Sbjct: 193 ---------------DEITRLARQYLTEPKLVTVSKTNLTV--PQIEQVYYEAPEKHKLE 235
Query: 476 YLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLFSQM 532
L +L + + IVFC + + + S L+ G +LH + Q+ R + Q
Sbjct: 236 ALCRLLDITDIAQGIVFCRTKRGVDDLVSGLQARGYTAVSLHGDLSQQQRNTVMRQF 292
>gi|440799062|gb|ELR20123.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 762
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 169/355 (47%), Gaps = 72/355 (20%)
Query: 175 DAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPI 234
+++ +L L L+K++ L + PTP+Q IP A QGKDV +A TGSGKT +F LPI
Sbjct: 193 ESFLDLHLSRALLKAVANLGYDRPTPVQSQAIPIAL-QGKDVCASATTGSGKTASFVLPI 251
Query: 235 MQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVR 294
++RL+ ++ R +I+TPTRELA+Q ++ +AK ++
Sbjct: 252 LERLIHRDKRIMAT-----------------RVVILTPTRELAIQCHSVIEKLAKFTDIT 294
Query: 295 VVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMI 354
+VGG+S + QE L+ P++VV TPGR+ + + + +E T+ VLDEADR++
Sbjct: 295 ACLVVGGLSNKVQEAALRRHPDIVVATPGRIIDHLRNAQSFTLE--TVDILVLDEADRLL 352
Query: 355 ENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRK 414
G EL+ II P RQTL+FSAT+
Sbjct: 353 SLGFADELEQIIKFCP------------------------PNRQTLLFSATMT------- 381
Query: 415 KLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFI---ECKEE 471
+ V+ L S+ +L+ +R + NM V A+ +++ FI E +E
Sbjct: 382 ----------EEVDRLASL-SLNRPVRVRLD------PNMRV-ASGIQQEFIKIKEAREF 423
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
D+DA L + + + R ++F + + + + G+ LH + Q RL
Sbjct: 424 DRDAMLLALCTRSFKKRVLIFFRAKKEAHRLKVIFGLAGLKAAELHGNLSQNQRL 478
>gi|401624697|gb|EJS42747.1| drs1p [Saccharomyces arboricola H-6]
Length = 747
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 172/358 (48%), Gaps = 79/358 (22%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+N L L ++K + L + +P+PIQ A IP A GKD+I A TGSGKT AF +PI++
Sbjct: 228 FNTLSLSRPVLKGLASLGYVKPSPIQSATIPIAL-LGKDIIAGAVTGSGKTAAFMIPIIE 286
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAK---GINV 293
RLL + K A R +++ PTRELA+QV D K +A+ GI
Sbjct: 287 RLLYKPAKIAAT-----------------RVIVLLPTRELAIQVADVGKQIARFLPGITF 329
Query: 294 RVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRM 353
+ VGG++ +QE+LLK RP++V+ TPGR + + V+ ++ V+DEADRM
Sbjct: 330 GLA--VGGLNLRQQEQLLKTRPDIVIATPGRFIDHIRNSASFNVD--SVEILVMDEADRM 385
Query: 354 IENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFR 413
+E G EL I+ +LP SN RQ L+FSAT
Sbjct: 386 LEEGFQDELSEIMGLLP----SN--------------------RQNLLFSAT-------- 413
Query: 414 KKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED- 472
+ SK + S+ +LS + +R ++D A +L + F+ ++ D
Sbjct: 414 -------MNSK-----IKSLVSLSLKRPVRI---MIDPPKQA--AARLTQEFVRIRKRDH 456
Query: 473 -KDAYLYYI---LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K + L+ + L GQ R +VF + ++ +LG+ V LH + Q RL
Sbjct: 457 LKPSLLFNLIRKLDPMGQKRIVVFVARKETAHRLRIVMGLLGMGVGELHGSLTQEQRL 514
>gi|325295336|ref|YP_004281850.1| DEAD/DEAH box helicase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065784|gb|ADY73791.1| DEAD/DEAH box helicase domain protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 425
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 77/354 (21%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
EF +N+L L + KS+ + F+ PTPIQK IP A +G D++G A+TG+GKT AFG+
Sbjct: 12 EF-TFNQLDLK--VQKSLEEMGFESPTPIQKEAIPLAL-EGYDIVGQAQTGTGKTAAFGI 67
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI++ + RE+ K A+++TPTRELA+QV L + K
Sbjct: 68 PIIENI-NSRERGVK-------------------AIVLTPTRELAIQVAHELSLIGKNKG 107
Query: 293 VRVVPIVGGMSTEKQERLLK-ARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
V PI GG+S E+Q +LK R ++VVGTPGR+ +L+S G L++L + F VLDEAD
Sbjct: 108 VSAYPIYGGVSIERQANILKRGRNQIVVGTPGRVKDLISRG---LLKLDRVRFAVLDEAD 164
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
+M++ G +++ I+ P +++QTL+FSAT+
Sbjct: 165 QMLDMGFIEDIEEILSKTP------------------------REKQTLLFSATMPYEI- 199
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
+KL LKS G +I+ ++ K+ + I K E
Sbjct: 200 --RKLIDNYLKS-----GYKTIK-----------------VGKNLITPKVHQRIIFVKSE 235
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRAR 525
DK L +L H TIVF + I L+ I+ +H + QR R
Sbjct: 236 DKLKALEKLLKEHQGTSTIVFVKTKRDAAEIEKELQKRSINARAIHGDLSQRQR 289
>gi|50543676|ref|XP_500004.1| YALI0A12133p [Yarrowia lipolytica]
gi|74660195|sp|Q6CH58.1|RRP3_YARLI RecName: Full=ATP-dependent rRNA helicase RRP3
gi|49645869|emb|CAG83933.1| YALI0A12133p [Yarrowia lipolytica CLIB122]
Length = 480
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 192/438 (43%), Gaps = 97/438 (22%)
Query: 89 KLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVE 148
K K+ KR A +E+SG D D QE + ++++ KK K +VE
Sbjct: 3 KATEKRVKR--AKKEESGSESEDNDAIA-----QEILDTTKSDNEEEEPKKSSKNYTSVE 55
Query: 149 ESVAVSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPA 208
V+E+E T+ + +L + + ++ L+F +PTPIQ IP
Sbjct: 56 ----------------VDESEEQTK--TFKDLGVIDSICETCEELKFTKPTPIQAQSIPY 97
Query: 209 AAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRAL 268
A +G+D+IG A+TGSGKT AF +P++Q L E + L +
Sbjct: 98 AL-EGRDIIGLAQTGSGKTAAFAIPVLQSLYENPQP--------------------LYCV 136
Query: 269 IITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWEL 328
++ PTRELA Q+++ + + + +R +VGGM+ Q L +P V+V TPGRL +
Sbjct: 137 VLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDH 196
Query: 329 MSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVT 388
+ + L TL F V+DEADR+++ L I+ ++P
Sbjct: 197 LENTKGF--SLRTLKFLVMDEADRLLDMEFGPSLDKILKVIP------------------ 236
Query: 389 VSSLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAI 448
++R T +FSAT+ + KL+ SL V +T
Sbjct: 237 ------RQRNTYLFSATMTSKVE---KLQRASLVDPVRVAVSTKYQT------------- 274
Query: 449 VDLTNMCVLANKLEESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKI 508
A+ L + + C + KD +L Y++S + I+F + + + IS LL+
Sbjct: 275 ---------ADNLLQYMVFCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISLLLRN 325
Query: 509 LGIDVWTLHAQMQQRARL 526
LG LH + Q ARL
Sbjct: 326 LGYGAIPLHGDLSQTARL 343
>gi|336271421|ref|XP_003350469.1| hypothetical protein SMAC_02182 [Sordaria macrospora k-hell]
gi|380090134|emb|CCC11960.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 615
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 206/441 (46%), Gaps = 75/441 (17%)
Query: 93 KKRKRSSANEEDSGDGDGDGDEDGSGVQKQEEKNLKNETGKKKKKKKKGKKIKTVEESVA 152
+KR+R+S +D D +ED + V + N + KKK+ + K + EE+
Sbjct: 107 RKRRRTSPTIDDIVAQIEDEEEDDTPVAPVK-PVFNNVPSRIKKKQPEAPKTEKTEETAP 165
Query: 153 VSNGPDDAEEELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQ 212
+ P+ A V + +T FDA N + P L++S+ + K PT IQK CIP +
Sbjct: 166 TTPVPEPASTVSV-PIDANTTFDALN---VRPWLVQSLANMAIKRPTGIQKGCIPEIL-K 220
Query: 213 GKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITP 272
G+D IG + TGSGKT+AF +PI+Q+ A + LI+TP
Sbjct: 221 GRDCIGGSRTGSGKTVAFAVPILQQW--------------------AANPSAIFGLILTP 260
Query: 273 TRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWE-LMSG 331
TRELALQ+ + + +++ ++ V I GG KQ L RP +V+ TPGRL + + +
Sbjct: 261 TRELALQIMEQVIALSQPHVLKAVLITGGSDMRKQAIDLANRPHLVIATPGRLADHIRTS 320
Query: 332 GEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQS-EQTQNCVTVS 390
GE + L + F VLDEADR++ N S KG + C +V
Sbjct: 321 GEDTICGLRRVKFIVLDEADRLLAN------------------SGKGSMLPDVEECFSVL 362
Query: 391 SLQRKKRQTLVFSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGM--RANVAI 448
+RQTL+F+AT+ ++ LSER + RA V +
Sbjct: 363 P-PPSERQTLLFTATMT-----------------------PEVKALSERPPIPGRAPVFV 398
Query: 449 VDL-TNMCVLANKLEESFIECKEEDKDAYLY-YILSVHGQGRT-IVFCTSIAALRHISSL 505
++ T + L + ++ ++ YL+ ++L+ ++ I+FC + + L
Sbjct: 399 CEVDTQRLAIPATLRQMHLQVPVTHREHYLHMFLLTPQNVDKSVIIFCNRTSTADFLHHL 458
Query: 506 LKILGIDVWTLHAQMQQRARL 526
L++L V +LH+++ Q R+
Sbjct: 459 LRLLDHRVTSLHSKLPQSQRI 479
>gi|302036818|ref|YP_003797140.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|190343232|gb|ACE75620.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|300604882|emb|CBK41215.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
Length = 431
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 127/236 (53%), Gaps = 47/236 (19%)
Query: 171 STEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAF 230
+T F +++ L + P L++++ + F EPT IQ IP A G+DV+G A+TG+GKT AF
Sbjct: 3 TTAFTSFDSLGVSPTLLRNLTKAGFAEPTAIQAQAIPHAL-AGRDVLGCAQTGTGKTAAF 61
Query: 231 GLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKG 290
+P+++RL PKG RALI+ PTRELA+Q+ + + +
Sbjct: 62 VIPMLERL-------------------SGTPKGQPRALILAPTRELAIQIQATIDTLGRD 102
Query: 291 INVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEA 350
+ + +VGG + Q R L+ RP+++V TPGRL + M G + L +S VLDEA
Sbjct: 103 LQLFATTVVGGADMQAQVRGLRQRPDIIVATPGRLLDHMWNGT---ISLLAMSILVLDEA 159
Query: 351 DRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATI 406
DRM++ G +++ I+D +P ++RQTL+FSAT+
Sbjct: 160 DRMLDMGFAQQINQILDAMP------------------------EERQTLLFSATM 191
>gi|358464311|ref|ZP_09174276.1| DEAD-box ATP-dependent RNA helicase CshA [Streptococcus sp. oral
taxon 058 str. F0407]
gi|357067077|gb|EHI77207.1| DEAD-box ATP-dependent RNA helicase CshA [Streptococcus sp. oral
taxon 058 str. F0407]
Length = 524
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 170/353 (48%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NE L L+ I + F E +PIQ+ IP A +GKDVIG A+TG+GKT AFGLP ++
Sbjct: 3 FNEFNLSADLLAEIEKAGFVEASPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EEA ++AL+I PTRELA+Q + L + V+V
Sbjct: 62 KI-------------RTEEA-------TIQALVIAPTRELAVQSQEELFRFGRSKGVKVR 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG S EKQ + LK+ +VVGTPGRL +L+ ++ ++LH + +LDEAD M+
Sbjct: 102 SVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLI---KRKALKLHDIETLILDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II +P + RQTL+FSAT+ D K++
Sbjct: 159 GFLEDIEAIISRVP------------------------ESRQTLLFSATMP---DAIKRI 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K + V +A +LT V ++ +I KE++K
Sbjct: 192 GVQFMKEPEHVK-----------------IAAKELTTELV-----DQYYIRVKEQEKFDT 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+ ++ V IVF + + ++ LKI G +H + Q RL++
Sbjct: 230 MTRLMDVEQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVL 282
>gi|417933911|ref|ZP_12577231.1| DEAD/DEAH box helicase [Streptococcus mitis bv. 2 str. F0392]
gi|340770481|gb|EGR92996.1| DEAD/DEAH box helicase [Streptococcus mitis bv. 2 str. F0392]
Length = 525
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 171/353 (48%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NE L L+ I + F E +PIQ+ IP A +GKDVIG A+TG+GKT AFGLP ++
Sbjct: 3 FNEFNLSADLLAEIEKAGFVEASPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EEA ++AL+I PTRELA+Q + L + V+V
Sbjct: 62 KI-------------RTEEA-------TIQALVIAPTRELAVQSQEELFRFGRSKGVKVR 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG S EKQ + LK+ +VVGTPGRL +L+ ++ ++LH + +LDEAD M+
Sbjct: 102 SVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLI---KRKALKLHDIETLILDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II +P + RQTL+FSAT+ D K++
Sbjct: 159 GFLEDIEAIISRVP------------------------ESRQTLLFSATM---PDAIKRI 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K + V +A +LT V ++ +I KE++K
Sbjct: 192 GVQFMKDPEHV-----------------KIAAKELTTELV-----DQYYIRVKEQEKFDT 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+ ++ V +IVF + + ++ LKI G +H + Q RL++
Sbjct: 230 MTRLMDVEQPELSIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVL 282
>gi|224096618|ref|XP_002310673.1| predicted protein [Populus trichocarpa]
gi|222853576|gb|EEE91123.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 68/354 (19%)
Query: 173 EFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGL 232
E ++ +L + L+++ L +K PT IQ +P A +GKD+IG A+TGSGKT AF L
Sbjct: 24 EVKSFKDLGICDQLVEACDSLGWKNPTKIQVEAVPHAL-EGKDLIGLAQTGSGKTGAFAL 82
Query: 233 PIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGIN 292
PI+Q LLE +K+ + A +++PTRELA+Q+ + + + GI
Sbjct: 83 PILQALLESSQKSVQ----------------PFFACVLSPTRELAIQIAEQFEALGSGIG 126
Query: 293 VRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADR 352
+R +VGG+ +Q +L RP +VV TPGRL + +S + L TL + VLDEADR
Sbjct: 127 LRCGVLVGGVDIVQQTLILAKRPHIVVATPGRLLDHLSNTKGF--SLRTLKYLVLDEADR 184
Query: 353 MIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADF 412
++ + L I++++P + R+T +FSAT+
Sbjct: 185 LLNEEFEKSLDEILNVIP------------------------RDRKTYLFSATMTKKV-- 218
Query: 413 RKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEED 472
KKL+ L++ + + T+ + L++ + +
Sbjct: 219 -KKLQRACLRNPVKIEAASKYSTV----------------------DTLKQQYRFVPSKH 255
Query: 473 KDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
KD YL YIL+ +VF + A ++ +L+ LG+ ++ M Q RL
Sbjct: 256 KDCYLVYILTEMSNSTAMVFTRTCDATSFLALVLRNLGLRAIPINGHMSQPKRL 309
>gi|158514834|sp|A3LS22.3|RRP3_PICST RecName: Full=ATP-dependent rRNA helicase RRP3
Length = 484
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 163/355 (45%), Gaps = 72/355 (20%)
Query: 172 TEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFG 231
+F ++EL+L P L+++I +++F +PTPIQ IP A +GKD+IG A+TGSGKT AF
Sbjct: 68 VKFSTFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHAL-EGKDIIGLAQTGSGKTAAFA 126
Query: 232 LPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGI 291
+PI+Q L E + L++ P RELA Q+ + + +
Sbjct: 127 IPILQSLWEAQTPYF--------------------GLVLAPARELAYQIKETFDALGSTM 166
Query: 292 NVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEAD 351
VR V +VGGM Q R L +P +++ TPGR+ + + + L L +FV+DEAD
Sbjct: 167 GVRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKG--FSLKMLKYFVMDEAD 224
Query: 352 RMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSAD 411
++++ L I+ +P KR T +FSAT+
Sbjct: 225 KLLDLEFGPVLDKILKQIP------------------------SKRTTYLFSATMT---- 256
Query: 412 FRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEE 471
N IE L +RA + N V +++ A+ L +S + +
Sbjct: 257 -------------------NKIEKL-QRASLH-NPVRVAVSSKYQTADNLIQSMMLVSDG 295
Query: 472 DKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARL 526
K+ YL ++L+ I+F + A + S L +ILG LH + Q RL
Sbjct: 296 YKNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCRILGFSAVPLHGDLTQAQRL 350
>gi|417915918|ref|ZP_12559512.1| DEAD-box ATP-dependent RNA helicase CshA [Streptococcus mitis bv. 2
str. SK95]
gi|342831712|gb|EGU66023.1| DEAD-box ATP-dependent RNA helicase CshA [Streptococcus mitis bv. 2
str. SK95]
Length = 525
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 170/353 (48%), Gaps = 73/353 (20%)
Query: 177 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQ 236
+NE L L+ I + F E +PIQ+ IP A +GKDVIG A+TG+GKT AFGLP ++
Sbjct: 3 FNEFNLSAELLAEIEKAGFVEASPIQEQTIPLAL-EGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 237 RLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVV 296
++ + EEA ++AL+I PTRELA+Q + L + V+V
Sbjct: 62 KI-------------RTEEA-------TIQALVIAPTRELAVQSQEELFRFGRSKGVKVR 101
Query: 297 PIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIEN 356
+ GG S EKQ + LK+ +VVGTPGRL +L+ ++ ++LH + +LDEAD M+
Sbjct: 102 SVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLI---KRKALKLHDIETLILDEADEMLNM 158
Query: 357 GHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKL 416
G ++++II +P + RQTL+FSAT+ D K++
Sbjct: 159 GFLEDIEAIISRVP------------------------ENRQTLLFSATM---PDAIKRI 191
Query: 417 KHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAY 476
+K + V +A +LT V ++ +I KE++K
Sbjct: 192 GVQFMKDPEHV-----------------KIAAKELTTELV-----DQYYIRVKEQEKFDT 229
Query: 477 LYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKLF 529
+ ++ V IVF + + ++ LKI G +H + Q RL++
Sbjct: 230 MTRLMDVEQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKRLRVL 282
>gi|375107400|ref|ZP_09753661.1| DNA/RNA helicase, superfamily II [Burkholderiales bacterium
JOSHI_001]
gi|374668131|gb|EHR72916.1| DNA/RNA helicase, superfamily II [Burkholderiales bacterium
JOSHI_001]
Length = 492
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 170/366 (46%), Gaps = 65/366 (17%)
Query: 162 EELVNEAEISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAE 221
+ ++ E+++ +N L L P L +++ + TPIQ IP G+DV+GAA+
Sbjct: 10 DSILEVPEVASAPALFNTLPLDPKLQRAVADQGYASMTPIQAKAIPIVL-DGRDVMGAAQ 68
Query: 222 TGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVT 281
TG+GKT AF LP++Q++L K E A + +RAL++ PTRELA QV
Sbjct: 69 TGTGKTAAFSLPLLQKML------------KHENASMSPARHPVRALVLAPTRELADQVA 116
Query: 282 DHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHT 341
++K AK N+R + GG+ + Q LKA EV++ TPGRL + + K+ V L+
Sbjct: 117 ANVKAYAKHTNLRSTVVFGGIDMKPQTAELKAGVEVLIATPGRLLDHIEA--KNCV-LNQ 173
Query: 342 LSFFVLDEADRMIENGHFRELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLV 401
+ + VLDEADRM++ G +LQ I+ LP ++RQTL+
Sbjct: 174 VEYVVLDEADRMLDIGFLPDLQRILSYLP------------------------RQRQTLL 209
Query: 402 FSATIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKL 461
FSAT + K+L + L+ + +V++ A +
Sbjct: 210 FSATFSPEI---KRLANSYLQ----------------------DPVLVEVARPNATATNV 244
Query: 462 EESFIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQ 521
E+ F ++DK + +L + IVF S ++ + G+ LH
Sbjct: 245 EQRFYSVTDDDKRRVVMQLLRNRSLSQAIVFVNSKLGAARLARSFERDGLKTSALHGDKS 304
Query: 522 QRARLK 527
Q RLK
Sbjct: 305 QDERLK 310
>gi|326431316|gb|EGD76886.1| hypothetical protein PTSG_08233 [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 176/361 (48%), Gaps = 49/361 (13%)
Query: 170 ISTEFDAWNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLA 229
I + W+E L P +++ I L FKEPTPIQ+A +P +D+ G AETGSGKTLA
Sbjct: 433 IPSPLRFWSESGLDPRILEIIDDLGFKEPTPIQRAALPIGL-TNRDICGVAETGSGKTLA 491
Query: 230 FGLPIMQRLLE----EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLK 285
F LP++Q +L ERE+ D G A+I+ P+REL Q+ + +
Sbjct: 492 FVLPLLQWILSLPKLEREQDI----DNGP-----------YAIILAPSRELVQQIEEQTR 536
Query: 286 GVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFF 345
+ + VR V ++GG S E+Q L+ EVV+ TPGRL +++ ++LV L+ ++
Sbjct: 537 KFSDPLGVRTVAVIGGASREEQGFQLRQGCEVVIATPGRLIDVLEN--RYLV-LNQCTYV 593
Query: 346 VLDEADRMIENGHFRELQSIIDMLPMTN-GSNKGQSEQTQNCVTVSSLQRKKRQTLVFSA 404
V+DEADRM++ G +Q I++ +P+TN N ++E + + K RQT++F+A
Sbjct: 594 VMDEADRMLDMGFEPAVQQILEHVPVTNQKPNTDEAEDEAFLLQDIKNKNKYRQTVLFTA 653
Query: 405 TIALSADFRKKLKHGSLKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEES 464
T+ + KL + L+ A + + + +++E+
Sbjct: 654 TMPPAV---MKLANTYLRRP----------------------ATIRIGTVGKPVDRVEQR 688
Query: 465 FIECKEEDKDAYLYYILSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRA 524
I E++K L IL + I+F ++ L+ +G TLH Q
Sbjct: 689 MILTTEQNKRNELVKILRSEPEPPIIIFVNQKKGCDVLARSLEKMGYRAATLHGGKGQDV 748
Query: 525 R 525
R
Sbjct: 749 R 749
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,691,640,018
Number of Sequences: 23463169
Number of extensions: 384694001
Number of successful extensions: 2208037
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19505
Number of HSP's successfully gapped in prelim test: 14546
Number of HSP's that attempted gapping in prelim test: 1981746
Number of HSP's gapped (non-prelim): 116820
length of query: 547
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 399
effective length of database: 8,886,646,355
effective search space: 3545771895645
effective search space used: 3545771895645
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)